Camarhynchus parvulus chromosome 9, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 9, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044579.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044579.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595705.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 25429348
topology: linear
so has quality: SO_0000987
location: 1..25429348
location: region:1-25429348:1
RO_0002162: 87175

NC_044579
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25429348:1
position: 25429348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25429348:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 9

87175
type: Taxonomy
SIO_000068: taxonomy

LOC115906857
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115906857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3262..43640)
location: region:3262-43640:-1
so has part: feature:3262-43640:-1:exon
subclass of: SO_0000011

115906857
type: Gene
SIO_000068: ncbigene

position:3262:-1
position: 3262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43640:-1
position: 43640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3262-43640:-1:exon

LOC115906857
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115906857
product: uncharacterized LOC115906857
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004060958.1
SIO_010081: LOC115906857
subclass of: SO_0000673
so part of: LOC115906857
location: complement(join(3262..3738,4106..4158,5402..5539,43570..43640))
location: region:3262-43640:-1
so has part: feature:43570-43640:-1:exon
so has part: feature:5402-5539:-1:exon
so has part: feature:4106-4158:-1:exon
so has part: feature:3262-3738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43570-43640:-1:exon

position:43570:-1
position: 43570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5402-5539:-1:exon

position:5402:-1
position: 5402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5539:-1
position: 5539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4106-4158:-1:exon

position:4106:-1
position: 4106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4158:-1
position: 4158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3262-3738:-1:exon

position:3738:-1
position: 3738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GYG1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22017..37239
location: region:22017-37239:1
so has part: feature:22017-37239:1:exon
subclass of: SO_0000010

115906856
type: Gene
SIO_000068: ncbigene

position:22017:1
position: 22017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37239:1
position: 37239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22017-37239:1:exon

GYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GYG1
product: glycogenin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954379.1
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(22017..22144,25451..25586,27464..27638,27950..28112,31538..31664,34772..34991,35878..37239)
location: region:22017-37239:1
so has part: feature:22017-22144:1:exon
so has part: feature:25451-25586:1:exon
so has part: feature:27464-27638:1:exon
so has part: feature:27950-28112:1:exon
so has part: feature:31538-31664:1:exon
so has part: feature:34772-34991:1:exon
so has part: feature:35878-37239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22017-22144:1:exon

position:22144:1
position: 22144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25451-25586:1:exon

position:25451:1
position: 25451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25586:1
position: 25586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27464-27638:1:exon

position:27464:1
position: 27464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27638:1
position: 27638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27950-28112:1:exon

position:27950:1
position: 27950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28112:1
position: 28112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31538-31664:1:exon

position:31538:1
position: 31538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31664:1
position: 31664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34772-34991:1:exon

position:34772:1
position: 34772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34991:1
position: 34991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:35878-37239:1:exon

position:35878:1
position: 35878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1
translation: MADQSFVTLATNDSYVKGALVLGSSLQQYRTTRKLTALITPQVSDLMRRVLEKVFDEVILVNVLDSGDSAHLALMKRPELGITLTKLHCWELTQFSKCVFMDADTMVLSNIDELFEREELSAAPDPGWPDCFNSGVFVYRPSIETYSQLLQFATEKGSFDGADQGLLNTFFSSWATTDMSKHLPFIYNLSSTSVYSYLPAFKAFGANTKVVHFLGSTKPWNYTYDSRTKSIKGNMDDPKIVHPEFLNMWWDTYIADVLPLLEQHGIVKEITTGVNMAEVTEAVSHVSVSPLLPTESSEERKERWEQGQADYMGVDSFDNIKKKLDTYLQ
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(22138..22144,25451..25586,27464..27638,27950..28112,31538..31664,34772..34991,35878..36039)
location: region:22138-36039:1
so has part: feature:22138-22144:1:exon
so has part: feature:25451-25586:1:exon
so has part: feature:27464-27638:1:exon
so has part: feature:27950-28112:1:exon
so has part: feature:31538-31664:1:exon
so has part: feature:34772-34991:1:exon
so has part: feature:35878-36039:1:exon

XP_030810239.1
type: Protein
SIO_000068: ncbiprotein

position:22138:1
position: 22138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36039:1
position: 36039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22138-22144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25451-25586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27464-27638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27950-28112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31538-31664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34772-34991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35878-36039:1:exon

LOC115906765
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115906765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 52315..56231
location: region:52315-56231:1
so has part: feature:52315-56231:1:exon
subclass of: SO_0000010

115906765
type: Gene
SIO_000068: ncbigene

position:52315:1
position: 52315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56231:1
position: 56231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52315-56231:1:exon

LOC115906765
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115906765
product: tubulin alpha-3 chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 83 Proteins
transcript id: XM_030954215.1
SIO_010081: LOC115906765
subclass of: SO_0000673
so part of: LOC115906765
location: join(52315..52343,53793..54015,54550..54698,55033..55713,55935..56231)
location: region:52315-56231:1
so has part: feature:52315-52343:1:exon
so has part: feature:53793-54015:1:exon
so has part: feature:54550-54698:1:exon
so has part: feature:55033-55713:1:exon
so has part: feature:55935-56231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52315-52343:1:exon

position:52343:1
position: 52343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53793-54015:1:exon

position:53793:1
position: 53793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54015:1
position: 54015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54550-54698:1:exon

position:54550:1
position: 54550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54698:1
position: 54698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:55033-55713:1:exon

position:55033:1
position: 55033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55713:1
position: 55713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:55935-56231:1:exon

position:55935:1
position: 55935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115906765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115906765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-3 chain-like
translation: MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQVPSDNTMGRGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIGRPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITHACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDSVEAEAEEGDEY
SIO_010081: LOC115906765
subclass of: SO_0000673
so part of: LOC115906765
location: join(52341..52343,53793..54015,54550..54698,55033..55713,55935..56231)
location: region:52341-56231:1
so has part: feature:52341-52343:1:exon
so has part: feature:53793-54015:1:exon
so has part: feature:54550-54698:1:exon
so has part: feature:55033-55713:1:exon
so has part: feature:55935-56231:1:exon

XP_030810075.1
type: Protein
SIO_000068: ncbiprotein

position:52341:1
position: 52341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52341-52343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53793-54015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54550-54698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55033-55713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55935-56231:1:exon

HPS3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56957..80887
location: region:56957-80887:1
so has part: feature:56957-80887:1:exon
subclass of: SO_0000010

115906739
type: Gene
SIO_000068: ncbigene

position:56957:1
position: 56957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80887:1
position: 80887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56957-80887:1:exon

HPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HPS3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954152.1
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(56957..57453,58364..58858,60148..60334,61319..61404,63099..63291,63559..63640,65406..65560,67083..67191,67402..67583,67941..68118,68761..68991,70629..70814,71994..72182,72737..72844,73198..73404,74699..74789,75924..80887)
location: region:56957-80887:1
so has part: feature:56957-57453:1:exon
so has part: feature:58364-58858:1:exon
so has part: feature:60148-60334:1:exon
so has part: feature:61319-61404:1:exon
so has part: feature:63099-63291:1:exon
so has part: feature:63559-63640:1:exon
so has part: feature:65406-65560:1:exon
so has part: feature:67083-67191:1:exon
so has part: feature:67402-67583:1:exon
so has part: feature:67941-68118:1:exon
so has part: feature:68761-68991:1:exon
so has part: feature:70629-70814:1:exon
so has part: feature:71994-72182:1:exon
so has part: feature:72737-72844:1:exon
so has part: feature:73198-73404:1:exon
so has part: feature:74699-74789:1:exon
so has part: feature:75924-80887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56957-57453:1:exon

position:57453:1
position: 57453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58364-58858:1:exon

position:58364:1
position: 58364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58858:1
position: 58858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60148-60334:1:exon

position:60148:1
position: 60148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60334:1
position: 60334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61319-61404:1:exon

position:61319:1
position: 61319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61404:1
position: 61404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:63099-63291:1:exon

position:63099:1
position: 63099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63291:1
position: 63291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:63559-63640:1:exon

position:63559:1
position: 63559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63640:1
position: 63640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65406-65560:1:exon

position:65406:1
position: 65406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65560:1
position: 65560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:67083-67191:1:exon

position:67083:1
position: 67083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67191:1
position: 67191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:67402-67583:1:exon

position:67402:1
position: 67402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67583:1
position: 67583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67941-68118:1:exon

position:67941:1
position: 67941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68118:1
position: 68118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:68761-68991:1:exon

position:68761:1
position: 68761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68991:1
position: 68991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:70629-70814:1:exon

position:70629:1
position: 70629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70814:1
position: 70814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:71994-72182:1:exon

position:71994:1
position: 71994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72182:1
position: 72182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:72737-72844:1:exon

position:72737:1
position: 72737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72844:1
position: 72844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:73198-73404:1:exon

position:73198:1
position: 73198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73404:1
position: 73404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:74699-74789:1:exon

position:74699:1
position: 74699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74789:1
position: 74789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:75924-80887:1:exon

position:75924:1
position: 75924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HPS3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954154.1
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(56957..57453,58364..58858,60148..60334,61319..61404,63099..63291,63559..63640,65406..65560,67083..67191,67402..67583,67941..68118,68761..68991,70629..70814,71994..72182,72737..72844,73198..73404,74699..74789,77743..80887)
location: region:56957-80887:1
so has part: feature:56957-57453:1:exon
so has part: feature:58364-58858:1:exon
so has part: feature:60148-60334:1:exon
so has part: feature:61319-61404:1:exon
so has part: feature:63099-63291:1:exon
so has part: feature:63559-63640:1:exon
so has part: feature:65406-65560:1:exon
so has part: feature:67083-67191:1:exon
so has part: feature:67402-67583:1:exon
so has part: feature:67941-68118:1:exon
so has part: feature:68761-68991:1:exon
so has part: feature:70629-70814:1:exon
so has part: feature:71994-72182:1:exon
so has part: feature:72737-72844:1:exon
so has part: feature:73198-73404:1:exon
so has part: feature:74699-74789:1:exon
so has part: feature:77743-80887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56957-57453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58364-58858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60148-60334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61319-61404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63099-63291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63559-63640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65406-65560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67083-67191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67402-67583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67941-68118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68761-68991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70629-70814:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71994-72182:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72737-72844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73198-73404:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74699-74789:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77743-80887:1:exon

position:77743:1
position: 77743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Hermansky-Pudlak syndrome 3 protein isoform X2
translation: MVQLYNLHPFGSQRVVPCKQEPAHFCCGQDVLFVASTAASCRVDVFTVREQGRCEALGSFATLGPVLRMAHSSAGDYLVTIEEKSKATFLRAYMNWRCMSAGSSRVCVRMVGHKMEESYSEALKEQMSVVEMPLSDPPLCISCCPVNGDLLVGCKNKLVIFCLKYRVINQNLTVLDFERSLILHIDNLIPAEVAFCARHIAITTELDVLILKLELVQQSADRTEQCARGVSAPEKAVDGGVKDESPSAHPLQLELDEFIICQKPVELLGEESKLCEIPVTLESTELPAEDTKHFQVQYLLFRRFAPDQSPFGFCEEMKLHSVQLLPVYQTGIPATAYEETENKRKLLSLFCFFSLPHVGYLYSLGKLVELISTYQYSEKSEQAVLTPQFLHVITSQNLQCFTVRCSAAAARSEDPYIDTTVKACPPVTLDVCTLRMQLFIGPRAICHFKNHIILLTKADTEDITERRKPTRRMLSRKADSIKSRTNSESELGWNLYIINTVSTIQLYREMVEYSRTYENVKTESCIHLLSEAHLLVRAAIMDPHFLKSDEKEDLLRAFRESCAFLGDCYSRFDTKDYHLALPYYRMSGLSMTEVLKRLVSEGDEIQTYERGFIFYLTHSLNEDSNEELSKESGNKVLQILYLADPVQLPDILCSPSMRNICPLTAVKYLQKVEKMMPSVVLTLTKAFFALKMGDLAMYEREMHSYKETTLACGFIGQPRLLQQRKEGIVTPTEFAVHLKEMQPGLLVAAAVALHENSKIELEEADTFFKMLCNSSENTIPQLLVDFWEALLVVSSQEKILQELLLRVTSQYVWRISKKQLPETKPLKTTEDLINSCCHFGLIVPWIASIMSVGCSSDKDYHEDISRLQSLLCSQSINIASALPVLEPLTEADSVGLTVHVLCNTRLGNYEEAIDQLLRRCPDAAVFYAQHELKGDSQALWWNKLLPELCKRTRLTGNDCPVLISSLKAMAIMRNLPNCVEMSGPEEYFPRN
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(57231..57453,58364..58858,60148..60334,61319..61404,63099..63291,63559..63640,65406..65560,67083..67191,67402..67583,67941..68118,68761..68991,70629..70814,71994..72182,72737..72844,73198..73404,74699..74789,77743..77816)
location: region:57231-77816:1
so has part: feature:57231-57453:1:exon
so has part: feature:58364-58858:1:exon
so has part: feature:60148-60334:1:exon
so has part: feature:61319-61404:1:exon
so has part: feature:63099-63291:1:exon
so has part: feature:63559-63640:1:exon
so has part: feature:65406-65560:1:exon
so has part: feature:67083-67191:1:exon
so has part: feature:67402-67583:1:exon
so has part: feature:67941-68118:1:exon
so has part: feature:68761-68991:1:exon
so has part: feature:70629-70814:1:exon
so has part: feature:71994-72182:1:exon
so has part: feature:72737-72844:1:exon
so has part: feature:73198-73404:1:exon
so has part: feature:74699-74789:1:exon
so has part: feature:77743-77816:1:exon

XP_030810014.1
type: Protein
SIO_000068: ncbiprotein

position:57231:1
position: 57231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77816:1
position: 77816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57231-57453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58364-58858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60148-60334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61319-61404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63099-63291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63559-63640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65406-65560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67083-67191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67402-67583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67941-68118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68761-68991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70629-70814:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71994-72182:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72737-72844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73198-73404:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74699-74789:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77743-77816:1:exon

HPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Hermansky-Pudlak syndrome 3 protein isoform X1
translation: MVQLYNLHPFGSQRVVPCKQEPAHFCCGQDVLFVASTAASCRVDVFTVREQGRCEALGSFATLGPVLRMAHSSAGDYLVTIEEKSKATFLRAYMNWRCMSAGSSRVCVRMVGHKMEESYSEALKEQMSVVEMPLSDPPLCISCCPVNGDLLVGCKNKLVIFCLKYRVINQNLTVLDFERSLILHIDNLIPAEVAFCARHIAITTELDVLILKLELVQQSADRTEQCARGVSAPEKAVDGGVKDESPSAHPLQLELDEFIICQKPVELLGEESKLCEIPVTLESTELPAEDTKHFQVQYLLFRRFAPDQSPFGFCEEMKLHSVQLLPVYQTGIPATAYEETENKRKLLSLFCFFSLPHVGYLYSLGKLVELISTYQYSEKSEQAVLTPQFLHVITSQNLQCFTVRCSAAAARSEDPYIDTTVKACPPVTLDVCTLRMQLFIGPRAICHFKNHIILLTKADTEDITERRKPTRRMLSRKADSIKSRTNSESELGWNLYIINTVSTIQLYREMVEYSRTYENVKTESCIHLLSEAHLLVRAAIMDPHFLKSDEKEDLLRAFRESCAFLGDCYSRFDTKDYHLALPYYRMSGLSMTEVLKRLVSEGDEIQTYERGFIFYLTHSLNEDSNEELSKESGNKVLQILYLADPVQLPDILCSPSMRNICPLTAVKYLQKVEKMMPSVVLTLTKAFFALKMGDLAMYEREMHSYKETTLACGFIGQPRLLQQRKEGIVTPTEFAVHLKEMQPGLLVAAAVALHENSKIELEEADTFFKMLCNSSENTIPQLLVDFWEALLVVSSQEKILQELLLRVTSQYVWRISKKQLPETKPLKTTEDLINSCCHFGLIVPWIASIMSVGCSSDKDYHEDISRLQSLLCSQSINIASALPVLEPLTEADSVGLTVHVLCNTRLGNYEEAIDQLLRRCPDAAVFYAQHELKGDSQALWWNKLLPELCKRTRLTGNDCPVLISSLKETLSIVAMELELRDFLSLLPEDGTAAFFLPHLLHCSQRKLLT
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(57231..57453,58364..58858,60148..60334,61319..61404,63099..63291,63559..63640,65406..65560,67083..67191,67402..67583,67941..68118,68761..68991,70629..70814,71994..72182,72737..72844,73198..73404,74699..74789,75924..76051)
location: region:57231-76051:1
so has part: feature:57231-57453:1:exon
so has part: feature:58364-58858:1:exon
so has part: feature:60148-60334:1:exon
so has part: feature:61319-61404:1:exon
so has part: feature:63099-63291:1:exon
so has part: feature:63559-63640:1:exon
so has part: feature:65406-65560:1:exon
so has part: feature:67083-67191:1:exon
so has part: feature:67402-67583:1:exon
so has part: feature:67941-68118:1:exon
so has part: feature:68761-68991:1:exon
so has part: feature:70629-70814:1:exon
so has part: feature:71994-72182:1:exon
so has part: feature:72737-72844:1:exon
so has part: feature:73198-73404:1:exon
so has part: feature:74699-74789:1:exon
so has part: feature:75924-76051:1:exon

XP_030810012.1
type: Protein
SIO_000068: ncbiprotein

position:76051:1
position: 76051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57231-57453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58364-58858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60148-60334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61319-61404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63099-63291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63559-63640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65406-65560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67083-67191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67402-67583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67941-68118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68761-68991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70629-70814:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71994-72182:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72737-72844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73198-73404:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74699-74789:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75924-76051:1:exon

HPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HPS3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954155.1
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(57489..57672,58364..58858,60148..60334,61319..61404,63099..63291,63559..63640,65406..65560,67083..67191,67402..67583,67941..68118,68761..68991,70629..70814,71994..72182,72737..72844,73198..73404,74699..74789,75924..80887)
location: region:57489-80887:1
so has part: feature:57489-57672:1:exon
so has part: feature:58364-58858:1:exon
so has part: feature:60148-60334:1:exon
so has part: feature:61319-61404:1:exon
so has part: feature:63099-63291:1:exon
so has part: feature:63559-63640:1:exon
so has part: feature:65406-65560:1:exon
so has part: feature:67083-67191:1:exon
so has part: feature:67402-67583:1:exon
so has part: feature:67941-68118:1:exon
so has part: feature:68761-68991:1:exon
so has part: feature:70629-70814:1:exon
so has part: feature:71994-72182:1:exon
so has part: feature:72737-72844:1:exon
so has part: feature:73198-73404:1:exon
so has part: feature:74699-74789:1:exon
so has part: feature:75924-80887:1:exon

position:57489:1
position: 57489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57489-57672:1:exon

position:57672:1
position: 57672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58364-58858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60148-60334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61319-61404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63099-63291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63559-63640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65406-65560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67083-67191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67402-67583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67941-68118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68761-68991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70629-70814:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71994-72182:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72737-72844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73198-73404:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74699-74789:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75924-80887:1:exon

HPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Hermansky-Pudlak syndrome 3 protein isoform X3
translation: MNWRCMSAGSSRVCVRMVGHKMEESYSEALKEQMSVVEMPLSDPPLCISCCPVNGDLLVGCKNKLVIFCLKYRVINQNLTVLDFERSLILHIDNLIPAEVAFCARHIAITTELDVLILKLELVQQSADRTEQCARGVSAPEKAVDGGVKDESPSAHPLQLELDEFIICQKPVELLGEESKLCEIPVTLESTELPAEDTKHFQVQYLLFRRFAPDQSPFGFCEEMKLHSVQLLPVYQTGIPATAYEETENKRKLLSLFCFFSLPHVGYLYSLGKLVELISTYQYSEKSEQAVLTPQFLHVITSQNLQCFTVRCSAAAARSEDPYIDTTVKACPPVTLDVCTLRMQLFIGPRAICHFKNHIILLTKADTEDITERRKPTRRMLSRKADSIKSRTNSESELGWNLYIINTVSTIQLYREMVEYSRTYENVKTESCIHLLSEAHLLVRAAIMDPHFLKSDEKEDLLRAFRESCAFLGDCYSRFDTKDYHLALPYYRMSGLSMTEVLKRLVSEGDEIQTYERGFIFYLTHSLNEDSNEELSKESGNKVLQILYLADPVQLPDILCSPSMRNICPLTAVKYLQKVEKMMPSVVLTLTKAFFALKMGDLAMYEREMHSYKETTLACGFIGQPRLLQQRKEGIVTPTEFAVHLKEMQPGLLVAAAVALHENSKIELEEADTFFKMLCNSSENTIPQLLVDFWEALLVVSSQEKILQELLLRVTSQYVWRISKKQLPETKPLKTTEDLINSCCHFGLIVPWIASIMSVGCSSDKDYHEDISRLQSLLCSQSINIASALPVLEPLTEADSVGLTVHVLCNTRLGNYEEAIDQLLRRCPDAAVFYAQHELKGDSQALWWNKLLPELCKRTRLTGNDCPVLISSLKETLSIVAMELELRDFLSLLPEDGTAAFFLPHLLHCSQRKLLT
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(58420..58858,60148..60334,61319..61404,63099..63291,63559..63640,65406..65560,67083..67191,67402..67583,67941..68118,68761..68991,70629..70814,71994..72182,72737..72844,73198..73404,74699..74789,75924..76051)
location: region:58420-76051:1
so has part: feature:58420-58858:1:exon
so has part: feature:60148-60334:1:exon
so has part: feature:61319-61404:1:exon
so has part: feature:63099-63291:1:exon
so has part: feature:63559-63640:1:exon
so has part: feature:65406-65560:1:exon
so has part: feature:67083-67191:1:exon
so has part: feature:67402-67583:1:exon
so has part: feature:67941-68118:1:exon
so has part: feature:68761-68991:1:exon
so has part: feature:70629-70814:1:exon
so has part: feature:71994-72182:1:exon
so has part: feature:72737-72844:1:exon
so has part: feature:73198-73404:1:exon
so has part: feature:74699-74789:1:exon
so has part: feature:75924-76051:1:exon

XP_030810015.1
type: Protein
SIO_000068: ncbiprotein

position:58420:1
position: 58420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58420-58858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60148-60334:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61319-61404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63099-63291:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63559-63640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65406-65560:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67083-67191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67402-67583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67941-68118:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68761-68991:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70629-70814:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:71994-72182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72737-72844:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73198-73404:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74699-74789:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:75924-76051:1:exon

CP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77609..101916)
location: region:77609-101916:-1
so has part: feature:77609-101916:-1:exon
subclass of: SO_0000010

115906738
type: Gene
SIO_000068: ncbigene

position:77609:-1
position: 77609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101916:-1
position: 101916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77609-101916:-1:exon

CP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CP
product: ceruloplasmin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 27 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954149.1
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(77609..77925,78983..79145,79548..79687,80343..80559,81268..81374,81940..82068,82541..82680,83825..84032,84376..84588,86186..86336,86687..86898,87021..87152,87704..87843,88794..88959,90166..90420,90994..91167,91669..91881,92791..93035,94651..94820,99507..99687,99784..99926,100569..100658,101470..101916))
location: region:77609-101916:-1
so has part: feature:101470-101916:-1:exon
so has part: feature:100569-100658:-1:exon
so has part: feature:99784-99926:-1:exon
so has part: feature:99507-99687:-1:exon
so has part: feature:94651-94820:-1:exon
so has part: feature:92791-93035:-1:exon
so has part: feature:91669-91881:-1:exon
so has part: feature:90994-91167:-1:exon
so has part: feature:90166-90420:-1:exon
so has part: feature:88794-88959:-1:exon
so has part: feature:87704-87843:-1:exon
so has part: feature:87021-87152:-1:exon
so has part: feature:86687-86898:-1:exon
so has part: feature:86186-86336:-1:exon
so has part: feature:84376-84588:-1:exon
so has part: feature:83825-84032:-1:exon
so has part: feature:82541-82680:-1:exon
so has part: feature:81940-82068:-1:exon
so has part: feature:81268-81374:-1:exon
so has part: feature:80343-80559:-1:exon
so has part: feature:79548-79687:-1:exon
so has part: feature:78983-79145:-1:exon
so has part: feature:77609-77925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101470-101916:-1:exon

position:101470:-1
position: 101470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100569-100658:-1:exon

position:100569:-1
position: 100569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100658:-1
position: 100658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99784-99926:-1:exon

position:99784:-1
position: 99784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99926:-1
position: 99926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99507-99687:-1:exon

position:99507:-1
position: 99507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99687:-1
position: 99687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94651-94820:-1:exon

position:94651:-1
position: 94651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94820:-1
position: 94820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92791-93035:-1:exon

position:92791:-1
position: 92791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93035:-1
position: 93035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91669-91881:-1:exon

position:91669:-1
position: 91669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91881:-1
position: 91881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:90994-91167:-1:exon

position:90994:-1
position: 90994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91167:-1
position: 91167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:90166-90420:-1:exon

position:90166:-1
position: 90166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90420:-1
position: 90420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:88794-88959:-1:exon

position:88794:-1
position: 88794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88959:-1
position: 88959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:87704-87843:-1:exon

position:87704:-1
position: 87704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87843:-1
position: 87843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:87021-87152:-1:exon

position:87021:-1
position: 87021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87152:-1
position: 87152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:86687-86898:-1:exon

position:86687:-1
position: 86687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86898:-1
position: 86898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:86186-86336:-1:exon

position:86186:-1
position: 86186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86336:-1
position: 86336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:84376-84588:-1:exon

position:84376:-1
position: 84376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84588:-1
position: 84588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:83825-84032:-1:exon

position:83825:-1
position: 83825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84032:-1
position: 84032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:82541-82680:-1:exon

position:82541:-1
position: 82541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82680:-1
position: 82680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:81940-82068:-1:exon

position:81940:-1
position: 81940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82068:-1
position: 82068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:81268-81374:-1:exon

position:81268:-1
position: 81268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81374:-1
position: 81374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:80343-80559:-1:exon

position:80343:-1
position: 80343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80559:-1
position: 80559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:79548-79687:-1:exon

position:79548:-1
position: 79548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79687:-1
position: 79687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:78983-79145:-1:exon

position:78983:-1
position: 78983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79145:-1
position: 79145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:77609-77925:-1:exon

position:77925:-1
position: 77925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CP
product: ceruloplasmin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954150.1
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(77609..77925,78983..79145,79548..79687,80343..80559,81268..81374,81940..82068,82541..82680,83825..84032,84376..84588,86186..86336,86687..86898,87006..87152,87704..87843,88794..88959,90166..90420,90994..91167,91669..91881,92791..93035,94651..94805))
location: region:77609-94805:-1
so has part: feature:94651-94805:-1:exon
so has part: feature:92791-93035:-1:exon
so has part: feature:91669-91881:-1:exon
so has part: feature:90994-91167:-1:exon
so has part: feature:90166-90420:-1:exon
so has part: feature:88794-88959:-1:exon
so has part: feature:87704-87843:-1:exon
so has part: feature:87006-87152:-1:exon
so has part: feature:86687-86898:-1:exon
so has part: feature:86186-86336:-1:exon
so has part: feature:84376-84588:-1:exon
so has part: feature:83825-84032:-1:exon
so has part: feature:82541-82680:-1:exon
so has part: feature:81940-82068:-1:exon
so has part: feature:81268-81374:-1:exon
so has part: feature:80343-80559:-1:exon
so has part: feature:79548-79687:-1:exon
so has part: feature:78983-79145:-1:exon
so has part: feature:77609-77925:-1:exon

position:94805:-1
position: 94805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94651-94805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92791-93035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91669-91881:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90994-91167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90166-90420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88794-88959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87704-87843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87006-87152:-1:exon

position:87006:-1
position: 87006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:86687-86898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86186-86336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84376-84588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83825-84032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82541-82680:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81940-82068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81268-81374:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:80343-80559:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79548-79687:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78983-79145:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77609-77925:-1:exon

CP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X1
translation: MALETCGNCLSCLLVPLALWSIVVNILLYFPNGKALPAASYQLPNHEWYFEGICFSGVMILLLAVILITLECSVFYRCCQSESCNKTYRSFISIVLALLGIAFSGYSCIIFTLHLIQGPSCNSSSGWNYIFKDTAGGYLTDYPAWSKCTEPPNIVEWNIILLSILIALSGLQLIICILKVAAELKRTLCGTYSVFVQVHECKMKLFLLICLLVSCCCRVGAVNREYYIGIRETVWNYAPGNANAISGQLFAEEEQAEVFLKRGPHRIGNTYKKAIYIQYTNHLYDVIVEKPSWLGFLGPIIKGEVGDSITIHLKNFASRNYTLHPHGVRYTKENEGAFYPDTTKDLQKRDDAVQPGGQYTYTWDVTEDQGPAKADADCITRAYHSHIDAPRDVASGLVGPLIICRKGTMNTDTDRHFDAEFILMFSVVDENLSWYLEDNIRTYCFEPSKVDKDDEDFQESNKMHSINGYMYGYLPNLTMCVEDKIKWHLFGMGNEADIHSAYFHGQTLIERHHRVDTISLFPATFIDAVMVPRSPGEWLLSCQVNDHIEGGMQALFKVEDCKKSTPGHSESTKIRQYFLAAEEIIWNYGPSAMNLFTGQELIVDSESHIFFEQSETRIGGSYKKAIYKEYTDGSFTEHKKRLAEEAHLGLLGPVIRAEVGERIRVTFRNNARRPFSIQPHGVSYRRSGAGARFGAGTESPASHVSPGTTFTYEWDVPEDVGPTEQDPDCLTWLYYSAVDAVRDTSSGLVGPLLVCRKGALLSSGKQKNVNMEFFLLATVFDENLSWYLDDNILMFTLSPDKIDKDDEDFQESNKMHSINGYMYGNQPGLEMCKGSAVSWHLMGLGSEVDVHGIYFSENTFVTKGTRRDTANLFPHTVLTAIMKPDSEGVFEVSCLTADHYTGGMKQNYKVKKCHRWNVDLSMYLHEKIYYIAAVEVEWDYSPNRTWEFERHQYHEESPGNPFLNKDDKFIGSKYKKVVYREYTDQTFSTPKSRAKEQQHLEIQGPLLVSNTGDKIIIVFKNLASRPYSIHAHGVKTDSSVVAVTNPGDTTMYVWKIPERSSPGRGDSHCIAWAYHSTVDIVKDTYSGLIGTLIVCHRHYLPSFHTKKKVQFALLFMVFDENESWYLDENIKMYSTNPHLVDKEDEGFLESNKMHAINGKVFGNLHGLTMHVGDNVSWYLMGMGNEIDIHTVHFHGHSFDYKQTGVYRADVFDLFPGTSQTVEMTPQNPGTWLLHCHVTDHIHAGMEATYTVLPKEDKQSLFPRFFNQFKRKCMPGTQE
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(77855..77925,78983..79145,79548..79687,80343..80559,81268..81374,81940..82068,82541..82680,83825..84032,84376..84588,86186..86336,86687..86898,87021..87152,87704..87843,88794..88959,90166..90420,90994..91167,91669..91881,92791..93035,94651..94820,99507..99687,99784..99926,100569..100658,101470..101646))
location: region:77855-101646:-1
so has part: feature:101470-101646:-1:exon
so has part: feature:100569-100658:-1:exon
so has part: feature:99784-99926:-1:exon
so has part: feature:99507-99687:-1:exon
so has part: feature:94651-94820:-1:exon
so has part: feature:92791-93035:-1:exon
so has part: feature:91669-91881:-1:exon
so has part: feature:90994-91167:-1:exon
so has part: feature:90166-90420:-1:exon
so has part: feature:88794-88959:-1:exon
so has part: feature:87704-87843:-1:exon
so has part: feature:87021-87152:-1:exon
so has part: feature:86687-86898:-1:exon
so has part: feature:86186-86336:-1:exon
so has part: feature:84376-84588:-1:exon
so has part: feature:83825-84032:-1:exon
so has part: feature:82541-82680:-1:exon
so has part: feature:81940-82068:-1:exon
so has part: feature:81268-81374:-1:exon
so has part: feature:80343-80559:-1:exon
so has part: feature:79548-79687:-1:exon
so has part: feature:78983-79145:-1:exon
so has part: feature:77855-77925:-1:exon

XP_030810009.1
type: Protein
SIO_000068: ncbiprotein

position:77855:-1
position: 77855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101646:-1
position: 101646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101470-101646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100569-100658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99784-99926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99507-99687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94651-94820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92791-93035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91669-91881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90994-91167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90166-90420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:88794-88959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:87704-87843:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87021-87152:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86687-86898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:86186-86336:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:84376-84588:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:83825-84032:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82541-82680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:81940-82068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:81268-81374:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:80343-80559:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:79548-79687:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:78983-79145:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:77855-77925:-1:exon

CP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X2
translation: MKLFLLICLLVSCCCRVGAVNREYYIGIRETVWNYAPGNANAISGQLFAEEEQAEVFLKRGPHRIGNTYKKAIYIQYTNHLYDVIVEKPSWLGFLGPIIKGEVGDSITIHLKNFASRNYTLHPHGVRYTKENEGAFYPDTTKDLQKRDDAVQPGGQYTYTWDVTEDQGPAKADADCITRAYHSHIDAPRDVASGLVGPLIICRKGTMNTDTDRHFDAEFILMFSVVDENLSWYLEDNIRTYCFEPSKVDKDDEDFQESNKMHSINGYMYGYLPNLTMCVEDKIKWHLFGMGNEADIHSAYFHGQTLIERHHRVDTISLFPATFIDAVMVPRSPGEWLLSCQVNDHIEGGMQALFKVEDCKKSTPGHSESTKIRQYFLAAEEIIWNYGPSAMNLFTGQELIVDSESHIFFEQSETRIGGSYKKAIYKEYTDGSFTEHKKRLAEEAHLGLLGPVIRAEVGERIRVTFRNNARRPFSIQPHGVSYRRSGAGARFGAGEPPMGTESPASHVSPGTTFTYEWDVPEDVGPTEQDPDCLTWLYYSAVDAVRDTSSGLVGPLLVCRKGALLSSGKQKNVNMEFFLLATVFDENLSWYLDDNILMFTLSPDKIDKDDEDFQESNKMHSINGYMYGNQPGLEMCKGSAVSWHLMGLGSEVDVHGIYFSENTFVTKGTRRDTANLFPHTVLTAIMKPDSEGVFEVSCLTADHYTGGMKQNYKVKKCHRWNVDLSMYLHEKIYYIAAVEVEWDYSPNRTWEFERHQYHEESPGNPFLNKDDKFIGSKYKKVVYREYTDQTFSTPKSRAKEQQHLEIQGPLLVSNTGDKIIIVFKNLASRPYSIHAHGVKTDSSVVAVTNPGDTTMYVWKIPERSSPGRGDSHCIAWAYHSTVDIVKDTYSGLIGTLIVCHRHYLPSFHTKKKVQFALLFMVFDENESWYLDENIKMYSTNPHLVDKEDEGFLESNKMHAINGKVFGNLHGLTMHVGDNVSWYLMGMGNEIDIHTVHFHGHSFDYKQTGVYRADVFDLFPGTSQTVEMTPQNPGTWLLHCHVTDHIHAGMEATYTVLPKEDKQSLFPRFFNQFKRKCMPGTQE
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(77855..77925,78983..79145,79548..79687,80343..80559,81268..81374,81940..82068,82541..82680,83825..84032,84376..84588,86186..86336,86687..86898,87006..87152,87704..87843,88794..88959,90166..90420,90994..91167,91669..91881,92791..93035,94651..94805))
location: region:77855-94805:-1
so has part: feature:94651-94805:-1:exon
so has part: feature:92791-93035:-1:exon
so has part: feature:91669-91881:-1:exon
so has part: feature:90994-91167:-1:exon
so has part: feature:90166-90420:-1:exon
so has part: feature:88794-88959:-1:exon
so has part: feature:87704-87843:-1:exon
so has part: feature:87006-87152:-1:exon
so has part: feature:86687-86898:-1:exon
so has part: feature:86186-86336:-1:exon
so has part: feature:84376-84588:-1:exon
so has part: feature:83825-84032:-1:exon
so has part: feature:82541-82680:-1:exon
so has part: feature:81940-82068:-1:exon
so has part: feature:81268-81374:-1:exon
so has part: feature:80343-80559:-1:exon
so has part: feature:79548-79687:-1:exon
so has part: feature:78983-79145:-1:exon
so has part: feature:77855-77925:-1:exon

XP_030810010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94651-94805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92791-93035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91669-91881:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90994-91167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90166-90420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88794-88959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87704-87843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87006-87152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86687-86898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86186-86336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84376-84588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83825-84032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82541-82680:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81940-82068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81268-81374:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:80343-80559:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79548-79687:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78983-79145:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77855-77925:-1:exon

CP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CP
product: ceruloplasmin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954151.1
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(98755..99100,99507..99687,99784..99926,100569..100658,101470..101916))
location: region:98755-101916:-1
so has part: feature:101470-101916:-1:exon
so has part: feature:100569-100658:-1:exon
so has part: feature:99784-99926:-1:exon
so has part: feature:99507-99687:-1:exon
so has part: feature:98755-99100:-1:exon

position:98755:-1
position: 98755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101470-101916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100569-100658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99784-99926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99507-99687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98755-99100:-1:exon

position:99100:-1
position: 99100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X3
translation: MALETCGNCLSCLLVPLALWSIVVNILLYFPNGKALPAASYQLPNHEWYFEGICFSGVMILLLAVILITLECSVFYRCCQSESCNKTYRSFISIVLALLGIAFSGYSCIIFTLHLIQGPSCNSSSGWNYIFKDTAGGYLTDYPAWSKCTEPPNIVEWNIILLSILIALSGLQLIICILKVAAELKRTLCGTYSVFVQAGIL
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(99086..99100,99507..99687,99784..99926,100569..100658,101470..101646))
location: region:99086-101646:-1
so has part: feature:101470-101646:-1:exon
so has part: feature:100569-100658:-1:exon
so has part: feature:99784-99926:-1:exon
so has part: feature:99507-99687:-1:exon
so has part: feature:99086-99100:-1:exon

XP_030810011.1
type: Protein
SIO_000068: ncbiprotein

position:99086:-1
position: 99086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101470-101646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100569-100658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99784-99926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99507-99687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99086-99100:-1:exon

TM4SF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TM4SF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(105877..110712)
location: region:105877-110712:-1
so has part: feature:105877-110712:-1:exon
subclass of: SO_0000010

115906736
type: Gene
SIO_000068: ncbigene

position:105877:-1
position: 105877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110712:-1
position: 110712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105877-110712:-1:exon

TM4SF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TM4SF1
product: transmembrane 4 L six family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954146.1
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(105877..105910,106130..106239,106818..106998,108387..108535,108618..108707,110476..110712))
location: region:105877-110712:-1
so has part: feature:110476-110712:-1:exon
so has part: feature:108618-108707:-1:exon
so has part: feature:108387-108535:-1:exon
so has part: feature:106818-106998:-1:exon
so has part: feature:106130-106239:-1:exon
so has part: feature:105877-105910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110476-110712:-1:exon

position:110476:-1
position: 110476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108618-108707:-1:exon

position:108618:-1
position: 108618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108707:-1
position: 108707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108387-108535:-1:exon

position:108387:-1
position: 108387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108535:-1
position: 108535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106818-106998:-1:exon

position:106818:-1
position: 106818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106998:-1
position: 106998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106130-106239:-1:exon

position:106130:-1
position: 106130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106239:-1
position: 106239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:105877-105910:-1:exon

position:105910:-1
position: 105910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TM4SF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TM4SF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 1
translation: MCFGSCARCVGYKLLILALLCIVANTLLYFPNGETRFASEHHLSKYVECLHGILGGGFLVLIPAAVFIGLHNDDCCGCFGHDGCGKSCAMLSSVVAAFVGILGSGYCIIISALGLSQGPYCLTHLERNWIYPFTDSTGGYLFEYNKWSECQEPQNIVQWNVTLFSILLVLGGIEFILCFIQIINGILGGLCGLCCSHEEALLNSLDIFQNQYQSASVEKKHGLKHEPDIVYITHYRHMFARNLTMY
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(105877..105910,106130..106239,106818..106998,108387..108535,108618..108707,110476..110652))
location: region:105877-110652:-1
so has part: feature:110476-110652:-1:exon
so has part: feature:108618-108707:-1:exon
so has part: feature:108387-108535:-1:exon
so has part: feature:106818-106998:-1:exon
so has part: feature:106130-106239:-1:exon
so has part: feature:105877-105910:-1:exon

XP_030810006.1
type: Protein
SIO_000068: ncbiprotein

position:110652:-1
position: 110652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110476-110652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108618-108707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108387-108535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106818-106998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106130-106239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105877-105910:-1:exon

TM4SF4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TM4SF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134074..140138
location: region:134074-140138:1
so has part: feature:134074-140138:1:exon
subclass of: SO_0000010

115906968
type: Gene
SIO_000068: ncbigene

position:134074:1
position: 134074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140138:1
position: 140138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134074-140138:1:exon

TM4SF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TM4SF4
product: transmembrane 4 L six family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954568.1
SIO_010081: TM4SF4
subclass of: SO_0000673
so part of: TM4SF4
location: join(134074..134244,134490..134579,136824..136957,139626..139815,140041..140138)
location: region:134074-140138:1
so has part: feature:134074-134244:1:exon
so has part: feature:134490-134579:1:exon
so has part: feature:136824-136957:1:exon
so has part: feature:139626-139815:1:exon
so has part: feature:140041-140138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134074-134244:1:exon

position:134244:1
position: 134244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134490-134579:1:exon

position:134490:1
position: 134490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134579:1
position: 134579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136824-136957:1:exon

position:136824:1
position: 136824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136957:1
position: 136957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139626-139815:1:exon

position:139626:1
position: 139626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139815:1
position: 139815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140041-140138:1:exon

position:140041:1
position: 140041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TM4SF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TM4SF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 4
translation: MCTGGCAKCLGSTLIPLAVLCTLANILLFFPGGKVEESAHITDEVWYFGGILGSGVLMIFPALVFLGLQNNDCCGCCGNRSCGKRFAMFSSIIFAAVGVLGAGYCFILSAVALNKGPKCQSQGGWTYPFEAGDYLADHALWEKCTSPDNIVPWHLTLFSLLLVMSGIQGVLCGIQAVNGLFGTICGDCKCCGCCGGEGTV
SIO_010081: TM4SF4
subclass of: SO_0000673
so part of: TM4SF4
location: join(134074..134244,134490..134579,136824..136957,139626..139815,140041..140058)
location: region:134074-140058:1
so has part: feature:134074-134244:1:exon
so has part: feature:134490-134579:1:exon
so has part: feature:136824-136957:1:exon
so has part: feature:139626-139815:1:exon
so has part: feature:140041-140058:1:exon

XP_030810428.1
type: Protein
SIO_000068: ncbiprotein

position:140058:1
position: 140058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134074-134244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134490-134579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136824-136957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139626-139815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140041-140058:1:exon

WWTR1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: WWTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(142823..185086)
location: region:142823-185086:-1
so has part: feature:142823-185086:-1:exon
subclass of: SO_0000010

115906777
type: Gene
SIO_000068: ncbigene

position:142823:-1
position: 142823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185086:-1
position: 185086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142823-185086:-1:exon

WWTR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: WWTR1
product: WW domain containing transcription regulator 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954243.1
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(142823..146547,147611..147723,148264..148397,153005..153194,163705..163841,184518..185086))
location: region:142823-185086:-1
so has part: feature:184518-185086:-1:exon
so has part: feature:163705-163841:-1:exon
so has part: feature:153005-153194:-1:exon
so has part: feature:148264-148397:-1:exon
so has part: feature:147611-147723:-1:exon
so has part: feature:142823-146547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184518-185086:-1:exon

position:184518:-1
position: 184518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163705-163841:-1:exon

position:163705:-1
position: 163705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163841:-1
position: 163841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153005-153194:-1:exon

position:153005:-1
position: 153005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153194:-1
position: 153194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148264-148397:-1:exon

position:148264:-1
position: 148264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148397:-1
position: 148397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147611-147723:-1:exon

position:147611:-1
position: 147611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147723:-1
position: 147723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:142823-146547:-1:exon

position:146547:-1
position: 146547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWTR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: WWTR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: WW domain-containing transcription regulator protein 1
translation: MNPAAAAPPPGQQVIHVTQDLDTELEALFNAVMNPRPSSWRKKILPESFFREPDSGSHSRQSSTDSGGPPPRLAPVHVRSHSSPASLPGAGAAPQHGHLRQRSCDVTDERPLPPGWEMALTQTGQRYFLNHIEKITTWQDPRKPVNQPLNHISHHPAATSAPAPQRTMAMSQPNLMLSAPPQLPPGAALPPRAXPPPPPALLALPGALATQQQQQKLRLQRIQMERERIRMRQEELLRQEAALCRQLPMDPENMVPVQTAVNTPAMTQDMRPITNNGSDPFLNSGPYHSREQSTDSGLGLGCYSIPTTPEDFLSNVDEMDTGETLAQTTMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPILNDVESVLNKNEPFLTWL
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(146363..146547,147611..147723,148264..148397,153005..153194,163705..163841,184518..184906))
location: region:146363-184906:-1
so has part: feature:184518-184906:-1:exon
so has part: feature:163705-163841:-1:exon
so has part: feature:153005-153194:-1:exon
so has part: feature:148264-148397:-1:exon
so has part: feature:147611-147723:-1:exon
so has part: feature:146363-146547:-1:exon

XP_030810103.1
type: Protein
SIO_000068: ncbiprotein

position:146363:-1
position: 146363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184906:-1
position: 184906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184518-184906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163705-163841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153005-153194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148264-148397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147611-147723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:146363-146547:-1:exon

COMMD2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: COMMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189294..192554)
location: region:189294-192554:-1
so has part: feature:189294-192554:-1:exon
subclass of: SO_0000010

115906880
type: Gene
SIO_000068: ncbigene

position:189294:-1
position: 189294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192554:-1
position: 192554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189294-192554:-1:exon

COMMD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: COMMD2
product: COMM domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954411.1
SIO_010081: COMMD2
subclass of: SO_0000673
so part of: COMMD2
location: complement(join(189294..189734,190227..190400,191654..191736,192297..192374,192460..192554))
location: region:189294-192554:-1
so has part: feature:192460-192554:-1:exon
so has part: feature:192297-192374:-1:exon
so has part: feature:191654-191736:-1:exon
so has part: feature:190227-190400:-1:exon
so has part: feature:189294-189734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192460-192554:-1:exon

position:192460:-1
position: 192460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192297-192374:-1:exon

position:192297:-1
position: 192297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192374:-1
position: 192374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191654-191736:-1:exon

position:191654:-1
position: 191654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191736:-1
position: 191736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:190227-190400:-1:exon

position:190227:-1
position: 190227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190400:-1
position: 190400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:189294-189734:-1:exon

position:189734:-1
position: 189734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COMMD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: COMMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 2
translation: MLLVLSAEHRAHLGCLPRAGGAAVGELGRLALEQLRRGAAPRACESAARKLNISVDIIQHGVEGLVYLLTESSKLMISEVDFQDSINVLGFSDELNKSLLQLYLDNRKEIRSILGELAPRLPSYHSLEWRLDVQLASRSLRQQIKPAVTMKLHLNQNEDQTAQVLQTDPATLLHLIQQLEQALGEMKMNHCRRIVRNMK
SIO_010081: COMMD2
subclass of: SO_0000673
so part of: COMMD2
location: complement(join(189537..189734,190227..190400,191654..191736,192297..192374,192460..192526))
location: region:189537-192526:-1
so has part: feature:192460-192526:-1:exon
so has part: feature:192297-192374:-1:exon
so has part: feature:191654-191736:-1:exon
so has part: feature:190227-190400:-1:exon
so has part: feature:189537-189734:-1:exon

XP_030810271.1
type: Protein
SIO_000068: ncbiprotein

position:189537:-1
position: 189537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192526:-1
position: 192526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192460-192526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192297-192374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191654-191736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190227-190400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189537-189734:-1:exon

RNF13
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RNF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193159..212089
location: region:193159-212089:1
so has part: feature:193159-212089:1:exon
subclass of: SO_0000010

115906892
type: Gene
SIO_000068: ncbigene

position:193159:1
position: 193159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212089:1
position: 212089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193159-212089:1:exon

RNF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RNF13
product: ring finger protein 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954427.1
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(193159..193245,196491..196618,198678..198758,202772..202897,204393..204480,206192..206282,206770..206875,208892..208985,209338..209418,210626..212089)
location: region:193159-212089:1
so has part: feature:193159-193245:1:exon
so has part: feature:196491-196618:1:exon
so has part: feature:198678-198758:1:exon
so has part: feature:202772-202897:1:exon
so has part: feature:204393-204480:1:exon
so has part: feature:206192-206282:1:exon
so has part: feature:206770-206875:1:exon
so has part: feature:208892-208985:1:exon
so has part: feature:209338-209418:1:exon
so has part: feature:210626-212089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193159-193245:1:exon

position:193245:1
position: 193245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196491-196618:1:exon

position:196491:1
position: 196491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196618:1
position: 196618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198678-198758:1:exon

position:198678:1
position: 198678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198758:1
position: 198758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202772-202897:1:exon

position:202772:1
position: 202772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202897:1
position: 202897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204393-204480:1:exon

position:204393:1
position: 204393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204480:1
position: 204480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206192-206282:1:exon

position:206192:1
position: 206192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206282:1
position: 206282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:206770-206875:1:exon

position:206770:1
position: 206770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206875:1
position: 206875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:208892-208985:1:exon

position:208892:1
position: 208892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208985:1
position: 208985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:209338-209418:1:exon

position:209338:1
position: 209338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209418:1
position: 209418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:210626-212089:1:exon

position:210626:1
position: 210626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RNF13
product: ring finger protein 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954426.1
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(193177..193276,196491..196618,198678..198758,202772..202897,204393..204480,206192..206282,206770..206875,208892..208985,209338..209418,210626..212089)
location: region:193177-212089:1
so has part: feature:193177-193276:1:exon
so has part: feature:196491-196618:1:exon
so has part: feature:198678-198758:1:exon
so has part: feature:202772-202897:1:exon
so has part: feature:204393-204480:1:exon
so has part: feature:206192-206282:1:exon
so has part: feature:206770-206875:1:exon
so has part: feature:208892-208985:1:exon
so has part: feature:209338-209418:1:exon
so has part: feature:210626-212089:1:exon

position:193177:1
position: 193177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193177-193276:1:exon

position:193276:1
position: 193276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196491-196618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198678-198758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202772-202897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204393-204480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206192-206282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206770-206875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208892-208985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209338-209418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210626-212089:1:exon

RNF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RNF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13
translation: MLLSIGMLMLSATQIYTIVTVQLFAFLNLLPVEADILAYNLENGTQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIAPPPLRDNSSGAFIVLIRRLECNFDVKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEILKKIDIPSVFIGETSANSLKEEFTYEKGGHVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQEENEVSENTPLLRPLASVSTQSFGALSESHSHQNMTESSEYEEDDNDNVDSSDAENGMNEESVVVQLQPSEDREYRVANTV
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(196505..196618,198678..198758,202772..202897,204393..204480,206192..206282,206770..206875,208892..208985,209338..209418,210626..210990)
location: region:196505-210990:1
so has part: feature:196505-196618:1:exon
so has part: feature:198678-198758:1:exon
so has part: feature:202772-202897:1:exon
so has part: feature:204393-204480:1:exon
so has part: feature:206192-206282:1:exon
so has part: feature:206770-206875:1:exon
so has part: feature:208892-208985:1:exon
so has part: feature:209338-209418:1:exon
so has part: feature:210626-210990:1:exon

XP_030810286.1
type: Protein
SIO_000068: ncbiprotein

position:196505:1
position: 196505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210990:1
position: 210990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196505-196618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198678-198758:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202772-202897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204393-204480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206192-206282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206770-206875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:208892-208985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209338-209418:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210626-210990:1:exon

RNF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RNF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13
translation: MLLSIGMLMLSATQIYTIVTVQLFAFLNLLPVEADILAYNLENGTQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIAPPPLRDNSSGAFIVLIRRLECNFDVKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEILKKIDIPSVFIGETSANSLKEEFTYEKGGHVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQEENEVSENTPLLRPLASVSTQSFGALSESHSHQNMTESSEYEEDDNDNVDSSDAENGMNEESVVVQLQPSEDREYRVANTV
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(196505..196618,198678..198758,202772..202897,204393..204480,206192..206282,206770..206875,208892..208985,209338..209418,210626..210990)
location: region:196505-210990:1
so has part: feature:196505-196618:1:exon
so has part: feature:198678-198758:1:exon
so has part: feature:202772-202897:1:exon
so has part: feature:204393-204480:1:exon
so has part: feature:206192-206282:1:exon
so has part: feature:206770-206875:1:exon
so has part: feature:208892-208985:1:exon
so has part: feature:209338-209418:1:exon
so has part: feature:210626-210990:1:exon

XP_030810287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196505-196618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198678-198758:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202772-202897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204393-204480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206192-206282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206770-206875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:208892-208985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209338-209418:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210626-210990:1:exon

PFN2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PFN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(214117..219419)
location: region:214117-219419:-1
so has part: feature:214117-219419:-1:exon
subclass of: SO_0000010

115906889
type: Gene
SIO_000068: ncbigene

position:214117:-1
position: 214117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219419:-1
position: 219419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214117-219419:-1:exon

PFN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PFN2
product: profilin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 74 ESTs, 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954421.1
SIO_010081: PFN2
subclass of: SO_0000673
so part of: PFN2
location: complement(join(214117..216151,217995..218187,219151..219419))
location: region:214117-219419:-1
so has part: feature:219151-219419:-1:exon
so has part: feature:217995-218187:-1:exon
so has part: feature:214117-216151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219151-219419:-1:exon

position:219151:-1
position: 219151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217995-218187:-1:exon

position:217995:-1
position: 217995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218187:-1
position: 218187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214117-216151:-1:exon

position:216151:-1
position: 216151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PFN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PFN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-2
translation: MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGIFQSITPGEIDMIVGKDREGFFTNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGVHGGGLNKKAYSMAKYLRDSGF
SIO_010081: PFN2
subclass of: SO_0000673
so part of: PFN2
location: complement(join(216054..216151,217995..218187,219151..219282))
location: region:216054-219282:-1
so has part: feature:219151-219282:-1:exon
so has part: feature:217995-218187:-1:exon
so has part: feature:216054-216151:-1:exon

XP_030810281.1
type: Protein
SIO_000068: ncbiprotein

position:216054:-1
position: 216054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219282:-1
position: 219282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219151-219282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217995-218187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216054-216151:-1:exon

TSC22D2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 280647..304616
location: region:280647-304616:1
so has part: feature:280647-304616:1:exon
subclass of: SO_0000010

115906934
type: Gene
SIO_000068: ncbigene

position:280647:1
position: 280647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304616:1
position: 304616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280647-304616:1:exon

TSC22D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TSC22D2
product: TSC22 domain family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954499.1
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(280647..282856,295456..295527,302158..302209,302967..304616)
location: region:280647-304616:1
so has part: feature:280647-282856:1:exon
so has part: feature:295456-295527:1:exon
so has part: feature:302158-302209:1:exon
so has part: feature:302967-304616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280647-282856:1:exon

position:282856:1
position: 282856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295456-295527:1:exon

position:295456:1
position: 295456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295527:1
position: 295527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302158-302209:1:exon

position:302158:1
position: 302158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302209:1
position: 302209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:302967-304616:1:exon

position:302967:1
position: 302967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSC22D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TSC22D2
product: TSC22 domain family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954501.1
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(280647..282856,302158..302209,302967..304616)
location: region:280647-304616:1
so has part: feature:280647-282856:1:exon
so has part: feature:302158-302209:1:exon
so has part: feature:302967-304616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280647-282856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302158-302209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302967-304616:1:exon

TSC22D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2 isoform X1
translation: MSKMPAKKKSCFQITSVTTAQVASSITEDTESLDDPDESRTEDVSSEIFDVSRATDYGPEDVCERSSSEETLNNVGEAETPSSVSPNLLLDGQLAVAAAGVAAGPNGGAVPKSSAVPLPAVAPGTAVGGGSSAQAPTVPGAMSQTAAAACSSRFRVIKLDHGTGEPYRRGRWTCMEYYDRDSDGGGVLSRTGDCIRHSSTFEQAAQERDSGLGATGGSVVISTVPASAHGPDSIADSSLAAVSQLLQTEKMNQSSLQQPNFVIGQQQQPVGGAVPQSTAQPVFSGASGASQQMIVPQQPQPQVNPQGVSQAGPNGKGMPPPNVTVGQSGIPVAQQQVQQANIPVTQPQQFAYSQSQIPPVHLLPTQPPGQAEYMQHMTIMQSQGAIQQATTSSAPSTVASSLPVGQVTGQNPSAVGAPVMGVSAQPSEAVGQGSGLLQSGQAPASQPALPQPGGVVQPGLGHTGVVQQKSVTQHPMGGSSQVSGMPGAPHAVVPGVQSVPAVVPGTSVPSASTTASAAMPNVPVTLVQSQLTSHPSASRSTGAVQSQHVGHSMMQGAPNAPASLPQASLGQFQTQAQSLVGQIDDTRRKSEPLPQPPLSLIAENKPLVKPPIPDTLANPLQLPASTPMNSLASSVFGISIPVDGDEDRNPSTAFYQAFHFNKLHESKTTWDSASGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSNNDQLSQLSSQQAAPSSTSQAQPPPAQPPQPNVSSA
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(280914..282856,295456..295527,302158..302209,302967..303206)
location: region:280914-303206:1
so has part: feature:280914-282856:1:exon
so has part: feature:295456-295527:1:exon
so has part: feature:302158-302209:1:exon
so has part: feature:302967-303206:1:exon

XP_030810359.1
type: Protein
SIO_000068: ncbiprotein

position:280914:1
position: 280914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303206:1
position: 303206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280914-282856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295456-295527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302158-302209:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302967-303206:1:exon

TSC22D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2 isoform X2
translation: MSKMPAKKKSCFQITSVTTAQVASSITEDTESLDDPDESRTEDVSSEIFDVSRATDYGPEDVCERSSSEETLNNVGEAETPSSVSPNLLLDGQLAVAAAGVAAGPNGGAVPKSSAVPLPAVAPGTAVGGGSSAQAPTVPGAMSQTAAAACSSRFRVIKLDHGTGEPYRRGRWTCMEYYDRDSDGGGVLSRTGDCIRHSSTFEQAAQERDSGLGATGGSVVISTVPASAHGPDSIADSSLAAVSQLLQTEKMNQSSLQQPNFVIGQQQQPVGGAVPQSTAQPVFSGASGASQQMIVPQQPQPQVNPQGVSQAGPNGKGMPPPNVTVGQSGIPVAQQQVQQANIPVTQPQQFAYSQSQIPPVHLLPTQPPGQAEYMQHMTIMQSQGAIQQATTSSAPSTVASSLPVGQVTGQNPSAVGAPVMGVSAQPSEAVGQGSGLLQSGQAPASQPALPQPGGVVQPGLGHTGVVQQKSVTQHPMGGSSQVSGMPGAPHAVVPGVQSVPAVVPGTSVPSASTTASAAMPNVPVTLVQSQLTSHPSASRSTGAVQSQHVGHSMMQGAPNAPASLPQASLGQFQTQAQSLVGQIDDTRRKSEPLPQPPLSLIAENKPLVKPPIPDTLANPLQLPASTPMNSLASSVFGISIPVDGDEDSASGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSNNDQLSQLSSQQAAPSSTSQAQPPPAQPPQPNVSSA
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(280914..282856,302158..302209,302967..303206)
location: region:280914-303206:1
so has part: feature:280914-282856:1:exon
so has part: feature:302158-302209:1:exon
so has part: feature:302967-303206:1:exon

XP_030810361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280914-282856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302158-302209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302967-303206:1:exon

SERP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SERP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307811..309650)
location: region:307811-309650:-1
so has part: feature:307811-309650:-1:exon
subclass of: SO_0000010

115907139
type: Gene
SIO_000068: ncbigene

position:307811:-1
position: 307811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309650:-1
position: 309650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307811-309650:-1:exon

SERP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SERP1
product: stress associated endoplasmic reticulum protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954826.1
SIO_010081: SERP1
subclass of: SO_0000673
so part of: SERP1
location: complement(join(307811..309199,309321..309396,309485..309650))
location: region:307811-309650:-1
so has part: feature:309485-309650:-1:exon
so has part: feature:309321-309396:-1:exon
so has part: feature:307811-309199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309485-309650:-1:exon

position:309485:-1
position: 309485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309321-309396:-1:exon

position:309321:-1
position: 309321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309396:-1
position: 309396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307811-309199:-1:exon

position:309199:-1
position: 309199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SERP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-associated endoplasmic reticulum protein 1
translation: MVAKQRIRMANEKHSKNITQRGNVAKTSRTAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMGM
SIO_010081: SERP1
subclass of: SO_0000673
so part of: SERP1
location: complement(join(309159..309199,309321..309396,309485..309568))
location: region:309159-309568:-1
so has part: feature:309485-309568:-1:exon
so has part: feature:309321-309396:-1:exon
so has part: feature:309159-309199:-1:exon

XP_030810686.1
type: Protein
SIO_000068: ncbiprotein

position:309159:-1
position: 309159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309568:-1
position: 309568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309485-309568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309321-309396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309159-309199:-1:exon

EIF2A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: EIF2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 309722..323328
location: region:309722-323328:1
so has part: feature:309722-323328:1:exon
subclass of: SO_0000010

115907123
type: Gene
SIO_000068: ncbigene

position:309722:1
position: 309722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323328:1
position: 323328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309722-323328:1:exon

EIF2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: EIF2A
product: eukaryotic translation initiation factor 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954807.1
SIO_010081: EIF2A
subclass of: SO_0000673
so part of: EIF2A
location: join(309722..309805,310816..310885,311176..311250,311876..311994,313041..313140,313511..313593,315303..315376,315524..315668,316645..316761,319000..319575,320843..320959,321795..321923,322746..322811,322887..323328)
location: region:309722-323328:1
so has part: feature:309722-309805:1:exon
so has part: feature:310816-310885:1:exon
so has part: feature:311176-311250:1:exon
so has part: feature:311876-311994:1:exon
so has part: feature:313041-313140:1:exon
so has part: feature:313511-313593:1:exon
so has part: feature:315303-315376:1:exon
so has part: feature:315524-315668:1:exon
so has part: feature:316645-316761:1:exon
so has part: feature:319000-319575:1:exon
so has part: feature:320843-320959:1:exon
so has part: feature:321795-321923:1:exon
so has part: feature:322746-322811:1:exon
so has part: feature:322887-323328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309722-309805:1:exon

position:309805:1
position: 309805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310816-310885:1:exon

position:310816:1
position: 310816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310885:1
position: 310885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311176-311250:1:exon

position:311176:1
position: 311176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311250:1
position: 311250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311876-311994:1:exon

position:311876:1
position: 311876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311994:1
position: 311994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313041-313140:1:exon

position:313041:1
position: 313041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313140:1
position: 313140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313511-313593:1:exon

position:313511:1
position: 313511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313593:1
position: 313593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315303-315376:1:exon

position:315303:1
position: 315303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315376:1
position: 315376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:315524-315668:1:exon

position:315524:1
position: 315524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315668:1
position: 315668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:316645-316761:1:exon

position:316645:1
position: 316645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316761:1
position: 316761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:319000-319575:1:exon

position:319000:1
position: 319000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319575:1
position: 319575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:320843-320959:1:exon

position:320843:1
position: 320843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320959:1
position: 320959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:321795-321923:1:exon

position:321795:1
position: 321795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321923:1
position: 321923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:322746-322811:1:exon

position:322746:1
position: 322746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322811:1
position: 322811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:322887-323328:1:exon

position:322887:1
position: 322887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: EIF2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2A
translation: MAPPTPLLAVRGSEGLYMVNGPPSFTESVAFQRDSGKNCKAVAFSKDGSLFGWCNGEKVNVVNVTRAELLHSFDLPKTVCLEFSPKNNVLATWQAYATAKDGTAGVPNLQLHDLRTGKCLKSFVQKKMQNWCPCWAEDESICARNVNNEVHFFENNNFNTIANKLHLQKVSDFVLSPGAQPTKVAVYVPGSKGAPSFVRLYQYPNFGGPQSALANKSFFKADKVTMLWNKKATAVLVVASTEVDKSGASYYGEQTLHYLAASGESAVVQLPKNGPIYDVAWSPNSVEFCAVYGFMPAKATVFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDGEHIVTATCAPRLRVGNGYKIWHYTGSVLHSHEVPADQEMWQVFWQPFLDGVFPERAVRYQAVPSELPGRAEPSPAQAYRPPALRNRPATSSKLHEDEPPQNMKPQLGGSDKPVSKIALKNQRKHEAKKAAKQEAKADAHQGPAQVRTPQNILQNTVPAMTTGDPEVDKKIKNLKKKLKAIEQLKEQAAAGKQLEKNQVEKIQKEAALLKELEDLELGV
SIO_010081: EIF2A
subclass of: SO_0000673
so part of: EIF2A
location: join(309778..309805,310816..310885,311176..311250,311876..311994,313041..313140,313511..313593,315303..315376,315524..315668,316645..316761,319000..319575,320843..320959,321795..321923,322746..322811,322887..322952)
location: region:309778-322952:1
so has part: feature:309778-309805:1:exon
so has part: feature:310816-310885:1:exon
so has part: feature:311176-311250:1:exon
so has part: feature:311876-311994:1:exon
so has part: feature:313041-313140:1:exon
so has part: feature:313511-313593:1:exon
so has part: feature:315303-315376:1:exon
so has part: feature:315524-315668:1:exon
so has part: feature:316645-316761:1:exon
so has part: feature:319000-319575:1:exon
so has part: feature:320843-320959:1:exon
so has part: feature:321795-321923:1:exon
so has part: feature:322746-322811:1:exon
so has part: feature:322887-322952:1:exon

XP_030810667.1
type: Protein
SIO_000068: ncbiprotein

position:309778:1
position: 309778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322952:1
position: 322952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309778-309805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310816-310885:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311176-311250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311876-311994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313041-313140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313511-313593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315303-315376:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315524-315668:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316645-316761:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:319000-319575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320843-320959:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321795-321923:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322746-322811:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322887-322952:1:exon

SELENOT
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SELENOT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 323428..329657
location: region:323428-329657:1
so has part: feature:323428-329657:1:exon
subclass of: SO_0000010

115906925
type: Gene
SIO_000068: ncbigene

position:323428:1
position: 323428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329657:1
position: 329657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323428-329657:1:exon

SELENOT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SELENOT
product: selenoprotein T
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954487.1
SIO_010081: SELENOT
subclass of: SO_0000673
so part of: SELENOT
location: join(323428..323624,324790..324900,325977..326103,327364..327451,328115..328266,328862..329657)
location: region:323428-329657:1
so has part: feature:323428-323624:1:exon
so has part: feature:324790-324900:1:exon
so has part: feature:325977-326103:1:exon
so has part: feature:327364-327451:1:exon
so has part: feature:328115-328266:1:exon
so has part: feature:328862-329657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323428-323624:1:exon

position:323624:1
position: 323624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324790-324900:1:exon

position:324790:1
position: 324790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324900:1
position: 324900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325977-326103:1:exon

position:325977:1
position: 325977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326103:1
position: 326103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:327364-327451:1:exon

position:327364:1
position: 327364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327451:1
position: 327451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328115-328266:1:exon

position:328115:1
position: 328115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328266:1
position: 328266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:328862-329657:1:exon

position:328862:1
position: 328862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SELENOT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SELENOT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:324797..324799,aa:Sec)
product: thioredoxin reductase-like selenoprotein T
translation: MRAAGLRRLLLLLLLAGLAAAPGGGGAAAAEQGGLPAKKLRMAYATGPLLKFQICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMESMPHHRS
SIO_010081: SELENOT
subclass of: SO_0000673
so part of: SELENOT
location: join(323461..323624,324790..324900,325977..326103,327364..327451,328115..328239)
location: region:323461-328239:1
so has part: feature:323461-323624:1:exon
so has part: feature:324790-324900:1:exon
so has part: feature:325977-326103:1:exon
so has part: feature:327364-327451:1:exon
so has part: feature:328115-328239:1:exon

XP_030810347.1
type: Protein
SIO_000068: ncbiprotein

position:323461:1
position: 323461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328239:1
position: 328239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323461-323624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324790-324900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325977-326103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327364-327451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328115-328239:1:exon

ERICH6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ERICH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(329651..335984)
location: region:329651-335984:-1
so has part: feature:329651-335984:-1:exon
subclass of: SO_0000010

115906924
type: Gene
SIO_000068: ncbigene

position:329651:-1
position: 329651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335984:-1
position: 335984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329651-335984:-1:exon

ERICH6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ERICH6
product: glutamate rich 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954486.1
SIO_010081: ERICH6
subclass of: SO_0000673
so part of: ERICH6
location: complement(join(329651..330754,331181..331406,331677..331829,332174..332259,332389..332810,333604..333668,334654..334811,334888..334986,335772..335984))
location: region:329651-335984:-1
so has part: feature:335772-335984:-1:exon
so has part: feature:334888-334986:-1:exon
so has part: feature:334654-334811:-1:exon
so has part: feature:333604-333668:-1:exon
so has part: feature:332389-332810:-1:exon
so has part: feature:332174-332259:-1:exon
so has part: feature:331677-331829:-1:exon
so has part: feature:331181-331406:-1:exon
so has part: feature:329651-330754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335772-335984:-1:exon

position:335772:-1
position: 335772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334888-334986:-1:exon

position:334888:-1
position: 334888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334986:-1
position: 334986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334654-334811:-1:exon

position:334654:-1
position: 334654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334811:-1
position: 334811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333604-333668:-1:exon

position:333604:-1
position: 333604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333668:-1
position: 333668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332389-332810:-1:exon

position:332389:-1
position: 332389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332810:-1
position: 332810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332174-332259:-1:exon

position:332174:-1
position: 332174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332259:-1
position: 332259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331677-331829:-1:exon

position:331677:-1
position: 331677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331829:-1
position: 331829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:331181-331406:-1:exon

position:331181:-1
position: 331181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331406:-1
position: 331406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329651-330754:-1:exon

position:330754:-1
position: 330754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERICH6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ERICH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 6
translation: MDGPGRAAEPSGGADHAAGGPRWPPAPEEGAEHPAEPQCGTPPAGPQPTPTGLPTLLAYRPESSEANVHHEAEEDAEPTCEYCGNLLRPFPFSQDVPLSEDQEDKFCCKRSRELYEFIMKERKRLEDASSLARAVSTQESLSSEANLLLSKEQDSQRQQKRHLARELVEQSLRLSATKGLQQAGSASYKPSQELTSPEGGTPASVASAAKPEPWPKEKPEPESQPKEKPEPESQPKEKPEPESRPKEKPEQEPRPEEELEEEPEEESELELWPEEEPELENEPESQPEEEPESKKEPKHDKKPMSRSVLCYEFSLLGKKVGKGKLVQKYYKNGKKFLTMLPDGTSQLFYPSGNLAVIIAQARDQLMCIVQEDEPRTAKIRALFQSDGRSTCYYPTGDEWINMSMQGGQYLDQAGNRVRRWMWPNLLPEPQVPLSPIFISLNHYVGVRILAQDKIFVSFLAMGRQAKLNMGTKVQVSTDSQLPPPARLGEDELLLLAFRVKILQLFDRMRGCLNFPSSEQWNKMQPPMYLISQAVKILELCMTADISDELANSIKAIVNAQQL
SIO_010081: ERICH6
subclass of: SO_0000673
so part of: ERICH6
location: complement(join(330488..330754,331181..331406,331677..331829,332174..332259,332389..332810,333604..333668,334654..334811,334888..334986,335772..335984))
location: region:330488-335984:-1
so has part: feature:335772-335984:-1:exon
so has part: feature:334888-334986:-1:exon
so has part: feature:334654-334811:-1:exon
so has part: feature:333604-333668:-1:exon
so has part: feature:332389-332810:-1:exon
so has part: feature:332174-332259:-1:exon
so has part: feature:331677-331829:-1:exon
so has part: feature:331181-331406:-1:exon
so has part: feature:330488-330754:-1:exon

XP_030810346.1
type: Protein
SIO_000068: ncbiprotein

position:330488:-1
position: 330488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335772-335984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334888-334986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334654-334811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333604-333668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332389-332810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332174-332259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331677-331829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331181-331406:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330488-330754:-1:exon

SIAH2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SIAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337659..339959)
location: region:337659-339959:-1
so has part: feature:337659-339959:-1:exon
subclass of: SO_0000010

115906833
type: Gene
SIO_000068: ncbigene

position:337659:-1
position: 337659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339959:-1
position: 339959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337659-339959:-1:exon

SIAH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIAH2
product: siah E3 ubiquitin protein ligase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954336.1
SIO_010081: SIAH2
subclass of: SO_0000673
so part of: SIAH2
location: complement(join(337659..338766,339491..339959))
location: region:337659-339959:-1
so has part: feature:339491-339959:-1:exon
so has part: feature:337659-338766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339491-339959:-1:exon

position:339491:-1
position: 339491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337659-338766:-1:exon

position:338766:-1
position: 338766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIAH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SIAH2
translation: MSRPSSAGPGPSKPCGKQQQHAPSPAAVLPGTEGASPPPPPPPPLPPPQQQQQQQQQELTSLFECPICFDYVLPPILQCQAGHLVCKQCRQQLSLCPTCRGSLTPNIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPKHEAICEYRPYSCPCPGTSCDWEGSLEAVMSHLMHAHKSITTLQGEDIIFLATDINLPGAVDWVMMQSCFGHHFMLVLKKQEKCEGHQQFFATVLLIGTRKQAENFQYRLELHGSCHRLTWEASPCSIHDGVHVAIRNSNCLVFDTATAHLFADNGNLGINVTISMCCP
SIO_010081: SIAH2
subclass of: SO_0000673
so part of: SIAH2
location: complement(join(338209..338766,339491..339862))
location: region:338209-339862:-1
so has part: feature:339491-339862:-1:exon
so has part: feature:338209-338766:-1:exon

XP_030810196.1
type: Protein
SIO_000068: ncbiprotein

position:338209:-1
position: 338209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339862:-1
position: 339862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339491-339862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338209-338766:-1:exon

MINDY4B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MINDY4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(341553..349151)
location: region:341553-349151:-1
so has part: feature:341553-349151:-1:exon
subclass of: SO_0000010

115907004
type: Gene
SIO_000068: ncbigene

position:341553:-1
position: 341553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349151:-1
position: 349151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341553-349151:-1:exon

MINDY4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MINDY4B
product: MINDY family member 4B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030954623.1
SIO_010081: MINDY4B
subclass of: SO_0000673
so part of: MINDY4B
location: complement(join(341553..341695,343062..343242,343798..343959,344256..344325,344482..344552,345077..345142,345532..345697,345938..346029,347180..347299,348021..348158,348768..348795,349048..349151))
location: region:341553-349151:-1
so has part: feature:349048-349151:-1:exon
so has part: feature:348768-348795:-1:exon
so has part: feature:348021-348158:-1:exon
so has part: feature:347180-347299:-1:exon
so has part: feature:345938-346029:-1:exon
so has part: feature:345532-345697:-1:exon
so has part: feature:345077-345142:-1:exon
so has part: feature:344482-344552:-1:exon
so has part: feature:344256-344325:-1:exon
so has part: feature:343798-343959:-1:exon
so has part: feature:343062-343242:-1:exon
so has part: feature:341553-341695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349048-349151:-1:exon

position:349048:-1
position: 349048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348768-348795:-1:exon

position:348768:-1
position: 348768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348795:-1
position: 348795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348021-348158:-1:exon

position:348021:-1
position: 348021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348158:-1
position: 348158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:347180-347299:-1:exon

position:347180:-1
position: 347180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347299:-1
position: 347299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:345938-346029:-1:exon

position:345938:-1
position: 345938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346029:-1
position: 346029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:345532-345697:-1:exon

position:345532:-1
position: 345532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345697:-1
position: 345697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:345077-345142:-1:exon

position:345077:-1
position: 345077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345142:-1
position: 345142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:344482-344552:-1:exon

position:344482:-1
position: 344482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344552:-1
position: 344552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:344256-344325:-1:exon

position:344256:-1
position: 344256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344325:-1
position: 344325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:343798-343959:-1:exon

position:343798:-1
position: 343798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343959:-1
position: 343959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:343062-343242:-1:exon

position:343062:-1
position: 343062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343242:-1
position: 343242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:341553-341695:-1:exon

position:341695:-1
position: 341695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MINDY4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MINDY4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B
translation: MGDRGAGSAAPTALQEIASRISDLSKWREIFSFRGLKINSTTHQHGRSSPGHGPPGAGESPGSEPPCTVPRPLLLPQGMGGRPISLDTAMRLQQLLFRSTAPLFSCEWAAAHFSFHPPHSHLAYALQAGKGGTRAILAAVQAHIISYLLFTRETECTHLERLRRLGRREQGQALATALAETLWAAGGGGRAVVCLVTAPVTTMPCEGYRANSFTERIQLFEFSEKAAAQEFISDHINCFKGEGSHGVILFLYSLLFSRTLERVQEDLGDASPLLNISSGNITCTEAVLSLLLTGRASPRQLGGGGREPEPGAGDGGGEEPCPRGPVGFLRWERARRQRQVSPGLRTPWLPVWLCSLSGRHSVLFGTDSRLLSDWKAERIFHLYFYSGQQEQTQNAHLTIDTHSHHWEEAQREGPCSRGRRHPALEMAIRTKWAGATISWNGTDPFF
SIO_010081: MINDY4B
subclass of: SO_0000673
so part of: MINDY4B
location: complement(join(341553..341695,343062..343242,343798..343959,344256..344325,344482..344552,345077..345142,345532..345697,345938..346029,347180..347299,348021..348158,348768..348795,349048..349151))
location: region:341553-349151:-1
so has part: feature:349048-349151:-1:exon
so has part: feature:348768-348795:-1:exon
so has part: feature:348021-348158:-1:exon
so has part: feature:347180-347299:-1:exon
so has part: feature:345938-346029:-1:exon
so has part: feature:345532-345697:-1:exon
so has part: feature:345077-345142:-1:exon
so has part: feature:344482-344552:-1:exon
so has part: feature:344256-344325:-1:exon
so has part: feature:343798-343959:-1:exon
so has part: feature:343062-343242:-1:exon
so has part: feature:341553-341695:-1:exon

XP_030810483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349048-349151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348768-348795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348021-348158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347180-347299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345938-346029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345532-345697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345077-345142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344482-344552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344256-344325:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343798-343959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343062-343242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341553-341695:-1:exon

CLRN1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CLRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(351263..355872)
location: region:351263-355872:-1
so has part: feature:351263-355872:-1:exon
subclass of: SO_0000010

115907069
type: Gene
SIO_000068: ncbigene

position:351263:-1
position: 351263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355872:-1
position: 355872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351263-355872:-1:exon

CLRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CLRN1
product: clarin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954704.1
SIO_010081: CLRN1
subclass of: SO_0000673
so part of: CLRN1
location: complement(join(351263..351528,352462..352641,355620..355872))
location: region:351263-355872:-1
so has part: feature:355620-355872:-1:exon
so has part: feature:352462-352641:-1:exon
so has part: feature:351263-351528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355620-355872:-1:exon

position:355620:-1
position: 355620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:352462-352641:-1:exon

position:352462:-1
position: 352462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352641:-1
position: 352641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:351263-351528:-1:exon

position:351528:-1
position: 351528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CLRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clarin-1
translation: MPAQQKKLLFCTAGLLSLACALGTAAAVGSQLWVRGSILCSTGALLVNASGAELHKFIGDIQYGLFSGQRVRQCGLGGRPTQFSFFPDLLRTIPASIHVSVILFCAVLIVFALVGAGFFMFNAFGSPYETLHGPVGLYLWSFISCSCGCLIMILFSSEVKIHHLSEKIANFKEGTFTFKTHSEQFANSFWTILVCSLVHFLNALLIRFAGFEFPFSKPKESGTITGAVDLMY
SIO_010081: CLRN1
subclass of: SO_0000673
so part of: CLRN1
location: complement(join(351263..351528,352462..352641,355620..355872))
location: region:351263-355872:-1
so has part: feature:355620-355872:-1:exon
so has part: feature:352462-352641:-1:exon
so has part: feature:351263-351528:-1:exon

XP_030810564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355620-355872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352462-352641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351263-351528:-1:exon

GPR171
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPR171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(357148..363390)
location: region:357148-363390:-1
so has part: feature:357148-363390:-1:exon
subclass of: SO_0000010

115907005
type: Gene
SIO_000068: ncbigene

position:357148:-1
position: 357148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363390:-1
position: 363390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357148-363390:-1:exon

GPR171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPR171
product: G protein-coupled receptor 171
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954626.1
SIO_010081: GPR171
subclass of: SO_0000673
so part of: GPR171
location: complement(join(357148..357583,362432..363390))
location: region:357148-363390:-1
so has part: feature:362432-363390:-1:exon
so has part: feature:357148-357583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362432-363390:-1:exon

position:362432:-1
position: 362432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357148-357583:-1:exon

position:357583:-1
position: 357583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPR171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 171
translation: MSTNISQCHLYEEMEPFTYFYYLIFLMGIIGSCFALWAFTQKDQKQKCMSIYLINLLTADFLLTLSLPVKIIVDLGIASWNLRIFHCQVTACFIYLNMYLSIIFLGFVSMDRCLQLMHSSKMYRIQEPGFARTLCAVVWAMVLLITVPNMAIPIKHIEERPGVGCIDFKTKFGRDWHVFTNFICTAIFLNSSAVILISNCLVVRQLRRHGRGERGGRVQQALAHVLLVTGAYLLCFVPYHAVRIPYTLSQGSASAACPLRRALFKAKEATLLFAISNLCLDPVLYYHLSRAFRLKFTETFAAPKETKALTATETAQQSQGAERGERPTSSGRGAAGQPRHPARGSGTPCPGLRDTLPGATGPCPGYGTPCPGLRDTLPGAPGHPARGYGTLPGLRDTLPGLRDTLPGATGHPARGSGTLPGLRDSARGYGTLPGATGPCLGLRDTLRGLRDTLPRARQCPPLVP
SIO_010081: GPR171
subclass of: SO_0000673
so part of: GPR171
location: complement(join(357148..357583,362432..363390))
location: region:357148-363390:-1
so has part: feature:362432-363390:-1:exon
so has part: feature:357148-357583:-1:exon

XP_030810486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362432-363390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357148-357583:-1:exon

P2RY14
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: P2RY14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(366708..367721)
location: region:366708-367721:-1
so has part: feature:366708-367721:-1:exon
subclass of: SO_0000010

115907056
type: Gene
SIO_000068: ncbigene

position:366708:-1
position: 366708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367721:-1
position: 367721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366708-367721:-1:exon

P2RY14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: P2RY14
product: purinergic receptor P2Y14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_030954683.1
SIO_010081: P2RY14
subclass of: SO_0000673
so part of: P2RY14
location: complement(366708..367721)
location: region:366708-367721:-1
so has part: feature:366708-367721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366708-367721:-1:exon

P2RY14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: P2RY14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 14
translation: MLNSSTSSSGNNCSHSTVITTTVIPLLYCLIFLAGLSLNALAAWVFLYVSSTKSFIVYLKNIAVADLLMSLTFPFKILADSGIAPAELSLFVCRYSAVVFYMNMYIGITFFGFIGFDRYYKIVKPLFTSFVHTVNYSKVVSVIIWLLLMIMSFPNMILTNEITKDNYSTKCIGLKSELGRQWHKATTYICTGIFWIVFFLLIVFYTSISKKIYSSYKKFRRSSDMAKRKTSRNIFTIMFVFVICFVPYHLCRTPYTLSQTSSQFTCQSQKSLFYAKEFTLVLSAANVCLDPIIYFFLCLPFREKLYQKLHLKLKASSEVEISKSRRSNTLPESINIV
SIO_010081: P2RY14
subclass of: SO_0000673
so part of: P2RY14
location: complement(366708..367721)
location: region:366708-367721:-1
so has part: feature:366708-367721:-1:exon

XP_030810543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366708-367721:-1:exon

GPR87
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPR87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(380882..382842)
location: region:380882-382842:-1
so has part: feature:380882-382842:-1:exon
subclass of: SO_0000010

115906971
type: Gene
SIO_000068: ncbigene

position:380882:-1
position: 380882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382842:-1
position: 382842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380882-382842:-1:exon

GPR87
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPR87
product: G protein-coupled receptor 87
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954573.1
SIO_010081: GPR87
subclass of: SO_0000673
so part of: GPR87
location: complement(join(380882..381903,382715..382842))
location: region:380882-382842:-1
so has part: feature:382715-382842:-1:exon
so has part: feature:380882-381903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382715-382842:-1:exon

position:382715:-1
position: 382715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380882-381903:-1:exon

position:381903:-1
position: 381903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR87
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPR87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 87
translation: MGYNLSYGKLPDSRPSPENSSWPNGSSAARDEFTTIVLPVLYLLIFLASLLLNGLAVWIFFHIRNKTSFIFYLKNIVVADLLMTLTFPFKIIQDSRLGPWHFNSFLCRYSTVLFYANMYTTIVFLGLISIDRYLKVVKPFGDSRMYSITFTKVLSACVWVVMAFLALPNLILTNGYPTRRNVDDCLKLKSPLGVKWHSAVIYINTCMFVVVLVVLIGCYIAISRYIYKSSKQFISSSSRKRKHNQSIRVVVAVFFTCFLPYHLCRIPFTFSHLDKILDDSAHRILYYCKEMTLFLSACNVCLDPIIYFFMCRSFSRRLFRKSNMRTRSESIRSLQSVRRSEVRIYHEYTDV
SIO_010081: GPR87
subclass of: SO_0000673
so part of: GPR87
location: complement(join(380882..381903,382715..382748))
location: region:380882-382748:-1
so has part: feature:382715-382748:-1:exon
so has part: feature:380882-381903:-1:exon

XP_030810433.1
type: Protein
SIO_000068: ncbiprotein

position:382748:-1
position: 382748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382715-382748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380882-381903:-1:exon

P2RY13
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: P2RY13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(397127..398754)
location: region:397127-398754:-1
so has part: feature:397127-398754:-1:exon
subclass of: SO_0000010

115906969
type: Gene
SIO_000068: ncbigene

position:397127:-1
position: 397127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398754:-1
position: 398754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397127-398754:-1:exon

P2RY13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: P2RY13
product: purinergic receptor P2Y13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954569.1
SIO_010081: P2RY13
subclass of: SO_0000673
so part of: P2RY13
location: complement(join(397127..398168,398685..398754))
location: region:397127-398754:-1
so has part: feature:398685-398754:-1:exon
so has part: feature:397127-398168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398685-398754:-1:exon

position:398685:-1
position: 398685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397127-398168:-1:exon

position:398168:-1
position: 398168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RY13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: P2RY13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 13
translation: MGTATEGSVTAAAGVPSLFPTMGGSANTSSVGNTSAPSSAQCQRDTTITHLLFPVLYTLIFFLGLLLNSLACWAFFHIPSTSTFIIYLKNILVSDFIMTLMLPLKILTDSGLAPWQLKAFVCRFSAVIFYDTMYISIVLLGLIAFDRFLKIVRPFGKFWVQNLTSAKILASLVWLFFLVLSLPNMVLSNKAATPQSVRKCASLKSYLGLKWHEAVNYVCQFIFWTVLILMLLFYIVIAKKVYESYVKTQKKGNRSEKRIKGKVFIIFTVFFLCFAPFHFSRVPYTVSQTSAHMDCRLQNQLFVAKESTLWLAATNVCMDPLIYLLLCKPFLEKVFYRRVKALQRTAQANPKTELDTRVSPTES
SIO_010081: P2RY13
subclass of: SO_0000673
so part of: P2RY13
location: complement(join(397127..398168,398685..398734))
location: region:397127-398734:-1
so has part: feature:398685-398734:-1:exon
so has part: feature:397127-398168:-1:exon

XP_030810429.1
type: Protein
SIO_000068: ncbiprotein

position:398734:-1
position: 398734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398685-398734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397127-398168:-1:exon

P2RY12
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: P2RY12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(400870..405447)
location: region:400870-405447:-1
so has part: feature:400870-405447:-1:exon
subclass of: SO_0000010

115906938
type: Gene
SIO_000068: ncbigene

position:400870:-1
position: 400870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405447:-1
position: 405447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400870-405447:-1:exon

P2RY12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: P2RY12
product: purinergic receptor P2Y12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954507.1
SIO_010081: P2RY12
subclass of: SO_0000673
so part of: P2RY12
location: complement(join(400870..402464,405327..405447))
location: region:400870-405447:-1
so has part: feature:405327-405447:-1:exon
so has part: feature:400870-402464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405327-405447:-1:exon

position:405327:-1
position: 405327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400870-402464:-1:exon

position:402464:-1
position: 402464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RY12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: P2RY12
product: purinergic receptor P2Y12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954506.1
SIO_010081: P2RY12
subclass of: SO_0000673
so part of: P2RY12
location: complement(join(400870..402464,403001..403083,405327..405359))
location: region:400870-405359:-1
so has part: feature:405327-405359:-1:exon
so has part: feature:403001-403083:-1:exon
so has part: feature:400870-402464:-1:exon

position:405359:-1
position: 405359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405327-405359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403001-403083:-1:exon

position:403001:-1
position: 403001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403083:-1
position: 403083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:400870-402464:-1:exon

P2RY12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: P2RY12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 12
translation: MQMKATTQFSSSRNDSNCTSDSRISQVIFPLLYTFLFLVGITMNGLAMWVFFKISSKSNFIIFLKNTVISDFLMILTFPFKILSDAKLVSWVLRGFVCQVTQVVFYFTMYISILFLGLITIDRYQKATSPFRTSTPRSLLAAKVLSTAIWLSMFALSLPNMILNNKKKTPKNVRKCALLKSEFGLVWHEIVNYICQLIFWVSLAVIVVCYILISKELYKSYKRTRCTGKGSKKTVNLKVFIIIAVFFICFVPFHFTRIPYTLSQTRDVFDCSARNALFYLKETTLWLTSLNACLDPFIYFFLCKSFRKSLLGMLCKHRAVSGAQAKGDDSDETPL
SIO_010081: P2RY12
subclass of: SO_0000673
so part of: P2RY12
location: complement(401440..402447)
location: region:401440-402447:-1
so has part: feature:401440-402447:-1:exon

XP_030810366.1
type: Protein
SIO_000068: ncbiprotein

position:401440:-1
position: 401440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402447:-1
position: 402447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401440-402447:-1:exon

P2RY12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: P2RY12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 12
translation: MQMKATTQFSSSRNDSNCTSDSRISQVIFPLLYTFLFLVGITMNGLAMWVFFKISSKSNFIIFLKNTVISDFLMILTFPFKILSDAKLVSWVLRGFVCQVTQVVFYFTMYISILFLGLITIDRYQKATSPFRTSTPRSLLAAKVLSTAIWLSMFALSLPNMILNNKKKTPKNVRKCALLKSEFGLVWHEIVNYICQLIFWVSLAVIVVCYILISKELYKSYKRTRCTGKGSKKTVNLKVFIIIAVFFICFVPFHFTRIPYTLSQTRDVFDCSARNALFYLKETTLWLTSLNACLDPFIYFFLCKSFRKSLLGMLCKHRAVSGAQAKGDDSDETPL
SIO_010081: P2RY12
subclass of: SO_0000673
so part of: P2RY12
location: complement(401440..402447)
location: region:401440-402447:-1
so has part: feature:401440-402447:-1:exon

XP_030810367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401440-402447:-1:exon

IGSF10
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: IGSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(416770..428833)
location: region:416770-428833:-1
so has part: feature:416770-428833:-1:exon
subclass of: SO_0000010

115907068
type: Gene
SIO_000068: ncbigene

position:416770:-1
position: 416770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428833:-1
position: 428833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416770-428833:-1:exon

IGSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: IGSF10
product: immunoglobulin superfamily member 10
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954703.1
SIO_010081: IGSF10
subclass of: SO_0000673
so part of: IGSF10
location: complement(join(416770..418845,419488..420381,421374..425423,425929..426319,426949..427078,428128..428833))
location: region:416770-428833:-1
so has part: feature:428128-428833:-1:exon
so has part: feature:426949-427078:-1:exon
so has part: feature:425929-426319:-1:exon
so has part: feature:421374-425423:-1:exon
so has part: feature:419488-420381:-1:exon
so has part: feature:416770-418845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428128-428833:-1:exon

position:428128:-1
position: 428128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426949-427078:-1:exon

position:426949:-1
position: 426949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427078:-1
position: 427078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425929-426319:-1:exon

position:425929:-1
position: 425929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426319:-1
position: 426319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:421374-425423:-1:exon

position:421374:-1
position: 421374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425423:-1
position: 425423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419488-420381:-1:exon

position:419488:-1
position: 419488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420381:-1
position: 420381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:416770-418845:-1:exon

position:418845:-1
position: 418845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: IGSF10
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: immunoglobulin superfamily member 10
translation: MGAPRREWRPRWLGTLLAACLAALPATSACPRPCACHGSAELHCTFRYFSAVPPRIPPDVRRINLGYNSLRKLSPTDFAGLEKMELLMLHSNEISTIPEKVFRDLRSLQVLKMSYNKVRVLQQDVFYGLNSLVRLHMDHNQIEFVNPNVFYGLTSLRLVHLDGNLLQQLHPDTFVTLRYSQIFRISFLKHISLSDNALTSLPQEMFSYMSELESIYLHGNPWSCDCSLQGLAGWAQERPDVIKCRKERSSGVQQCPVCASPKTHNGKSLVDLPSASFTCTKPVIDDSLKSRNLSVPDDGDFSFVSPKDLMAPMGSVVLNMTDQAGNRGNLVCNVQRPKAMSPISFDQSGPSRVLKASFSAFLVCGIDYGHIQQLWSILALYSSSPLKLEQTARAAEEPSVSYKYRQVYSEKDELFTGMEAELRAEPAWLLQRQVSLQLDRTATTLSTLHLRYAAQARVPLPSQDKEQGRPGWAVISRDSSTQTERTVLRGGTVQLGCQAAGQPAPAVEWILADGSRVRAPHISEDGRILVLKSGVLTLRTADVFDSGLYHCISTNHKDADALTFRITVLDPDLERSGVNGAQLPAALGSTLHLPCTATAAPDPAVTWVLPEHTVLRQSAGNKHIFANGTLRIQGVTQRDLGYFRCVAANRFGVDLLVFQVLERQDETALKKKHGALGEWEEGSGNELLRSAAAQRDPSGTAGALGALGEPAAPAASSQSTRQRNSHGKMPHWPYADRTGRRFRGHRRQFVPSGRRADPQRWAALLEKTRRNSTVADKRGEAATEPPIQARKLSEVPGDEGETSGDLVSPEEEFMIPATARAPVSALGRATELMITAGAEETENPPPAWSTSLLPTEPITPLPSPLPHPGASASKMPQTLPKPTDSWERSDLSQISANGVKQPTVPSGTATLFPAGQKSIYSGESNNQHLKSASMTPTTGTSKAVTPQNTADKLHIFTESIDNVSPKADHQVPVVTVAPSSEFGPIYFHDTQRGRAPNPPALTFTARRQIQVIQGVPTHPAQLQQHHGRRRKISGRRRIVRPGRVPGMKEPGYNFGRPGSARGSTAVATGAQLNRNYASNVPTLNNSSRSIINPFSPETPQSFPSTMKMPLEHPVGAHQNTAFLREEEKKHGARQKAAATVMSVTAGDTATPAASGLGVMGLEPTVTLVISPQTDTRATNSKILRVGGRRGQRRKRPPKTPAPQCVAAAQSTAATPAGTPAARTVISAASIATPAVSTAGTPAAQSTAGTPAVSTAGTPAAQSTAAIPAVSTAAIPTVTAPASPAVPPSLAPANPLPGSSSAVPRSEAAALGVPESPSAPQHSPTAATQAAAAAPGTWRGTPSAMPLPGSVTAQSPPWAPQTAPDSHRNTLLATAPAASPAQTPTTGLQASPWPEEPPGAASAPPGPGPAQPSRGAARAGGEPLPGRGQGAARARQAAQPALPAGAPAAAAAARAQRPSPLPAPAAAGPAAPPRAPSPPRGHGQLQLQPGPPPEGTERGNALPAPQITPPWGGDKDSSASAWSDRRHNQDTTTLPSPITFGSASKNHFSKPRIVGGKVAAFTVLADSDAFIPCEATGNPPPTIQWTKIPSGRDAAGAGAASRWSVLPNGTLAVARAGLQDAGQYQCTAANALGSARLLATLAVQALPPRIAAGRPLTAHAGAAAALPCRAXGQPPPRISWLLPDGTELGPGSAGRGRARVQPDGTLLLRAVTVYDRGTYTCRARNAAGSDALPLRLQVVAAPPAILEERRQSVAGAAGQSLSLPCTAQGQPEPGVHWVLPGGAVLRPLQALHARLVLLANGTLRLGSINPSDSGTYECIATSSTGSDRRVVSLTVEHRDTPPKIAIASPELTRLNFGERLLLNCTANGEPKPRIIWRLPSKALVDQWHRMGSRIHVFPNGSLAIEAVTEKDAGDYLCVARNRIGEDLILMKVSITMKPAKIEHKQQFKKLVPYGKDFRVDCKASGSPTPAISWGLPDGTVVNNTMLADDSGHRAHRYILFH…
SIO_010081: IGSF10
subclass of: SO_0000673
so part of: IGSF10
location: complement(join(416937..418845,419488..420381,421374..425423,425929..426319,426949..427078,428128..428324))
location: region:416937-428324:-1
so has part: feature:428128-428324:-1:exon
so has part: feature:426949-427078:-1:exon
so has part: feature:425929-426319:-1:exon
so has part: feature:421374-425423:-1:exon
so has part: feature:419488-420381:-1:exon
so has part: feature:416937-418845:-1:exon

XP_030810563.1
type: Protein
SIO_000068: ncbiprotein

position:416937:-1
position: 416937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428324:-1
position: 428324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428128-428324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426949-427078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425929-426319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421374-425423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419488-420381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416937-418845:-1:exon

AADAC
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: AADAC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 451027..459903
location: region:451027-459903:1
so has part: feature:451027-459903:1:exon
subclass of: SO_0000010

115906904
type: Gene
SIO_000068: ncbigene

position:451027:1
position: 451027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459903:1
position: 459903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451027-459903:1:exon

AADAC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: AADAC
product: arylacetamide deacetylase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954446.1
SIO_010081: AADAC
subclass of: SO_0000673
so part of: AADAC
location: join(451027..451440,455164..455386,455642..455711,456046..456217,457281..459903)
location: region:451027-459903:1
so has part: feature:451027-451440:1:exon
so has part: feature:455164-455386:1:exon
so has part: feature:455642-455711:1:exon
so has part: feature:456046-456217:1:exon
so has part: feature:457281-459903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451027-451440:1:exon

position:451440:1
position: 451440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455164-455386:1:exon

position:455164:1
position: 455164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455386:1
position: 455386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455642-455711:1:exon

position:455642:1
position: 455642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455711:1
position: 455711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456046-456217:1:exon

position:456046:1
position: 456046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456217:1
position: 456217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:457281-459903:1:exon

position:457281:1
position: 457281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AADAC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: AADAC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arylacetamide deacetylase
translation: MGARLLCLCLLTALLGYYIYSPLPPELAQPGTVMLASAALRALGHLSEVAELLGLMHYMEGLRLITTVELVAPTSDENVTVTDTELGGVPVRLYLPKRPPGGLRRAVLFFHGGGWCLGDAGMHGYDLMSRRISNELNAVVVSVNYRLAPLHRFPAQFEDVYVVTKFFLQSKVLSQYGVDPARVCVAGDSAGGNLAAAVAQQLSEDPEVKTKLRAQVLIYPALQALDLDLPSYRDNAHKPLLPRSLMVRFWSEYLSPEPALRAAMAANRHAPPEAGRLLPLVNWSRWLPAAMRGARTPTRARPCARWRGAGGAPALLDRVRAAAGAAGALRCRPRRSVLTCEHDVLRDDGAMYAAPRLRAAGVPVTHHHAGDAFHGAMTFLAWPLELAVGHRLFNTCVEWLKENL
SIO_010081: AADAC
subclass of: SO_0000673
so part of: AADAC
location: join(451303..451440,455164..455386,455642..455711,456046..456217,457281..457893)
location: region:451303-457893:1
so has part: feature:451303-451440:1:exon
so has part: feature:455164-455386:1:exon
so has part: feature:455642-455711:1:exon
so has part: feature:456046-456217:1:exon
so has part: feature:457281-457893:1:exon

XP_030810306.1
type: Protein
SIO_000068: ncbiprotein

position:451303:1
position: 451303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457893:1
position: 457893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451303-451440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455164-455386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455642-455711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456046-456217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457281-457893:1:exon

SUCNR1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SUCNR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 461712..464140
location: region:461712-464140:1
so has part: feature:461712-464140:1:exon
subclass of: SO_0000010

115907066
type: Gene
SIO_000068: ncbigene

position:461712:1
position: 461712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464140:1
position: 464140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461712-464140:1:exon

SUCNR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SUCNR1
product: succinate receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954701.1
SIO_010081: SUCNR1
subclass of: SO_0000673
so part of: SUCNR1
location: join(461712..461848,463190..464140)
location: region:461712-464140:1
so has part: feature:461712-461848:1:exon
so has part: feature:463190-464140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461712-461848:1:exon

position:461848:1
position: 461848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463190-464140:1:exon

position:463190:1
position: 463190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUCNR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SUCNR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate receptor 1
translation: MAVNETSDYFLTNRVLEKYYLSTMYSLEFIIGAIGNTIVVFGYIFCLKKWKSSNIYLFNLSISDLLFLCTLPILVNSYSKDQWAKESILCHSNRFLLHANLYSSILFLMAISIDRYMLMKHPFREHILQKRNTAVMVSVAIWIGVILELLPLLHFLEPIAPDNNYKCLDYASSGEPVASLVYSMFLTVFGFLIPLLTMCYFYVKMVRFLQNRSEQIRSALTLEKPQTLVILTVVIFSLLFTPYHVMRNVRIASRIPALNVSECTQGVISTIYIITRPFAFLNSAINPVFYFLMGDHFREMLMAKTRQLLGRLTSTGK
SIO_010081: SUCNR1
subclass of: SO_0000673
so part of: SUCNR1
location: join(461846..461848,463190..464140)
location: region:461846-464140:1
so has part: feature:461846-461848:1:exon
so has part: feature:463190-464140:1:exon

XP_030810561.1
type: Protein
SIO_000068: ncbiprotein

position:461846:1
position: 461846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461846-461848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463190-464140:1:exon

MBNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 474886..540632
location: region:474886-540632:1
so has part: feature:474886-540632:1:exon
subclass of: SO_0000010

115906751
type: Gene
SIO_000068: ncbigene

position:474886:1
position: 474886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540632:1
position: 540632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474886-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954191.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(474886..475098,493307..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536566,537341..540632)
location: region:474886-540632:1
so has part: feature:474886-475098:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474886-475098:1:exon

position:475098:1
position: 475098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

position:493307:1
position: 493307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494212:1
position: 494212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

position:517265:1
position: 517265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517435:1
position: 517435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

position:519479:1
position: 519479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519679:1
position: 519679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

position:525116:1
position: 525116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525373:1
position: 525373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:526253-526306:1:exon

position:526253:1
position: 526253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526306:1
position: 526306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:527094-527247:1:exon

position:527094:1
position: 527094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527247:1
position: 527247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:532730-532765:1:exon

position:532730:1
position: 532730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532765:1
position: 532765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:533454-533548:1:exon

position:533454:1
position: 533454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533548:1
position: 533548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:536492-536566:1:exon

position:536492:1
position: 536492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536566:1
position: 536566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:537341-540632:1:exon

position:537341:1
position: 537341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954198.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(474886..475098,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536566,537341..540632)
location: region:474886-540632:1
so has part: feature:474886-475098:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474886-475098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954190.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(478990..479093,493307..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536566,537341..540632)
location: region:478990-540632:1
so has part: feature:478990-479093:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

position:478990:1
position: 478990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478990-479093:1:exon

position:479093:1
position: 479093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954189.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(479227..479325,493307..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536566,537341..540632)
location: region:479227-540632:1
so has part: feature:479227-479325:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

position:479227:1
position: 479227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479227-479325:1:exon

position:479325:1
position: 479325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 50 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954192.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(479227..479325,493307..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,533454..533548,536492..536566,537341..540632)
location: region:479227-540632:1
so has part: feature:479227-479325:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479227-479325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 48 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954196.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(479227..479325,493307..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,536492..536566,537341..540632)
location: region:479227-540632:1
so has part: feature:479227-479325:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479227-479325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954193.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(479227..479325,493307..494212,517265..517435,519479..519679,525116..525373,527094..527247,532730..532765,533454..533548,536492..536566,537341..540632)
location: region:479227-540632:1
so has part: feature:479227-479325:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479227-479325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 53 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954194.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(479227..479325,493307..494212,517265..517435,519479..519679,525116..525373,527094..527247,533454..533548,536492..536566,537341..540632)
location: region:479227-540632:1
so has part: feature:479227-479325:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479227-479325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MBNL1
product: muscleblind like splicing regulator 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 49 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954197.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(479227..479325,493307..494212,517265..517435,519479..519679,525116..525373,527094..527247,536492..536566,537341..540632)
location: region:479227-540632:1
so has part: feature:479227-479325:1:exon
so has part: feature:493307-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:536492-536566:1:exon
so has part: feature:537341-540632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479227-479325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493307-494212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536492-536566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537341-540632:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X1
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536548)
location: region:494039-536548:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536548:1:exon

XP_030810049.1
type: Protein
SIO_000068: ncbiprotein

position:494039:1
position: 494039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536548:1
position: 536548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536492-536548:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X1
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536548)
location: region:494039-536548:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536548:1:exon

XP_030810050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536492-536548:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X1
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536548)
location: region:494039-536548:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536548:1:exon

XP_030810051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536492-536548:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X2
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,533454..533548,536492..536548)
location: region:494039-536548:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536548:1:exon

XP_030810052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536492-536548:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X3
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,527094..527247,532730..532765,533454..533548,536492..536548)
location: region:494039-536548:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536548:1:exon

XP_030810053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536492-536548:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X4
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,527094..527247,533454..533548,536492..536548)
location: region:494039-536548:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536548:1:exon

XP_030810054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536492-536548:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X5
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPDTHNICRTSD
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,526253..526306,527094..527247,536492..536523)
location: region:494039-536523:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:536492-536523:1:exon

XP_030810056.1
type: Protein
SIO_000068: ncbiprotein

position:536523:1
position: 536523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536492-536523:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X6
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPDTHNICRTSD
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(494039..494212,517265..517435,519479..519679,525116..525373,527094..527247,536492..536523)
location: region:494039-536523:1
so has part: feature:494039-494212:1:exon
so has part: feature:517265-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:536492-536523:1:exon

XP_030810057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494039-494212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517265-517435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536492-536523:1:exon

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1 isoform X7
translation: MAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAFNPYLGPVSPGLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(517367..517435,519479..519679,525116..525373,526253..526306,527094..527247,532730..532765,533454..533548,536492..536548)
location: region:517367-536548:1
so has part: feature:517367-517435:1:exon
so has part: feature:519479-519679:1:exon
so has part: feature:525116-525373:1:exon
so has part: feature:526253-526306:1:exon
so has part: feature:527094-527247:1:exon
so has part: feature:532730-532765:1:exon
so has part: feature:533454-533548:1:exon
so has part: feature:536492-536548:1:exon

XP_030810058.1
type: Protein
SIO_000068: ncbiprotein

position:517367:1
position: 517367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517367-517435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519479-519679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525116-525373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526253-526306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527094-527247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532730-532765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533454-533548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536492-536548:1:exon

P2RY1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: P2RY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 563303..566604
location: region:563303-566604:1
so has part: feature:563303-566604:1:exon
subclass of: SO_0000010

115906824
type: Gene
SIO_000068: ncbigene

position:563303:1
position: 563303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566604:1
position: 566604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563303-566604:1:exon

P2RY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: P2RY1
product: purinergic receptor P2Y1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954322.1
SIO_010081: P2RY1
subclass of: SO_0000673
so part of: P2RY1
location: join(563303..563393,563748..566604)
location: region:563303-566604:1
so has part: feature:563303-563393:1:exon
so has part: feature:563748-566604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563303-563393:1:exon

position:563393:1
position: 563393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563748-566604:1:exon

position:563748:1
position: 563748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

P2RY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: P2RY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 1
translation: MTEVLLSAALNGTEPNLLSSSGWSAGNVTTKCSLTKTGFQFYYLPTVYILVFITGFLGNSVAIWMFVFHMRPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDIMCKLQRFIFHVNLYGSILFLTCISVHRYTGVVHPLKSLGRLKKKNAVYISSLVWVLVVAVISPILFYSGTGIRKNKTITCYDTTADDYLRSYFIYSMCTTVLMFCIPFIVILGCYGLIVKALIYKDLDNSPLRRKSIYLVIIVLTVFAVSYLPFHVMKTLNLRARVDFQTPDMCAFNDKVYATYQVTRGLASLNSCVDPILYFLAGDTFRRKLSRATRKSSRRSEHNVQSKSEEMTLNILTEYKQNGDTSL
SIO_010081: P2RY1
subclass of: SO_0000673
so part of: P2RY1
location: 563816..564907
location: region:563816-564907:1
so has part: feature:563816-564907:1:exon

XP_030810182.1
type: Protein
SIO_000068: ncbiprotein

position:563816:1
position: 563816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564907:1
position: 564907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563816-564907:1:exon

RAP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RAP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 600706..601812
location: region:600706-601812:1
so has part: feature:600706-601812:1:exon
subclass of: SO_0000010

115907082
type: Gene
SIO_000068: ncbigene

position:600706:1
position: 600706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601812:1
position: 601812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600706-601812:1:exon

RAP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RAP2B
product: RAP2B, member of RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954727.1
SIO_010081: RAP2B
subclass of: SO_0000673
so part of: RAP2B
location: 600706..601812
location: region:600706-601812:1
so has part: feature:600706-601812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600706-601812:1:exon

RAP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RAP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-2b
translation: MREYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSFGEGKALAEEWSCPFMETSAKNKASVDELFAEIVRQMNYAAQPNGDEPCCASCAIL
SIO_010081: RAP2B
subclass of: SO_0000673
so part of: RAP2B
location: 600982..601533
location: region:600982-601533:1
so has part: feature:600982-601533:1:exon

XP_030810587.1
type: Protein
SIO_000068: ncbiprotein

position:600982:1
position: 600982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601533:1
position: 601533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600982-601533:1:exon

ARHGEF26
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARHGEF26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 605024..730754
location: region:605024-730754:1
so has part: feature:605024-730754:1:exon
subclass of: SO_0000010

115907006
type: Gene
SIO_000068: ncbigene

position:605024:1
position: 605024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730754:1
position: 730754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605024-730754:1:exon

ARHGEF26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARHGEF26
product: Rho guanine nucleotide exchange factor 26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954627.1
SIO_010081: ARHGEF26
subclass of: SO_0000673
so part of: ARHGEF26
location: join(605024..605081,612297..613331,630232..630405,704678..705786,707193..707229,709086..709231,712729..712785,714716..714876,720665..720817,721214..721343,722445..722519,723055..723144,725891..726045,727853..728068,729351..729418,729614..729718,730478..730754)
location: region:605024-730754:1
so has part: feature:605024-605081:1:exon
so has part: feature:612297-613331:1:exon
so has part: feature:630232-630405:1:exon
so has part: feature:704678-705786:1:exon
so has part: feature:707193-707229:1:exon
so has part: feature:709086-709231:1:exon
so has part: feature:712729-712785:1:exon
so has part: feature:714716-714876:1:exon
so has part: feature:720665-720817:1:exon
so has part: feature:721214-721343:1:exon
so has part: feature:722445-722519:1:exon
so has part: feature:723055-723144:1:exon
so has part: feature:725891-726045:1:exon
so has part: feature:727853-728068:1:exon
so has part: feature:729351-729418:1:exon
so has part: feature:729614-729718:1:exon
so has part: feature:730478-730754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605024-605081:1:exon

position:605081:1
position: 605081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612297-613331:1:exon

position:612297:1
position: 612297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613331:1
position: 613331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:630232-630405:1:exon

position:630232:1
position: 630232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630405:1
position: 630405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:704678-705786:1:exon

position:704678:1
position: 704678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705786:1
position: 705786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:707193-707229:1:exon

position:707193:1
position: 707193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707229:1
position: 707229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:709086-709231:1:exon

position:709086:1
position: 709086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709231:1
position: 709231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:712729-712785:1:exon

position:712729:1
position: 712729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712785:1
position: 712785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:714716-714876:1:exon

position:714716:1
position: 714716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714876:1
position: 714876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:720665-720817:1:exon

position:720665:1
position: 720665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720817:1
position: 720817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:721214-721343:1:exon

position:721214:1
position: 721214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721343:1
position: 721343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:722445-722519:1:exon

position:722445:1
position: 722445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722519:1
position: 722519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:723055-723144:1:exon

position:723055:1
position: 723055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723144:1
position: 723144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:725891-726045:1:exon

position:725891:1
position: 725891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726045:1
position: 726045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:727853-728068:1:exon

position:727853:1
position: 727853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728068:1
position: 728068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:729351-729418:1:exon

position:729351:1
position: 729351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729418:1
position: 729418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:729614-729718:1:exon

position:729614:1
position: 729614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729718:1
position: 729718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:730478-730754:1:exon

position:730478:1
position: 730478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARHGEF26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 26
translation: MFAKGIFNKGQLALYGFLTGLQPGPQRQLGIPRRLCSQRPLFCTRNSLRLLQQELPRLRAQSSAALPAPGPACRVRVLPCAGFIRVRGSSVCGSHRVRGSSVCGVHPCAGPTVCRVHPCAGFIHVRVLPCAGFIHVRVLPCAGFIRVRGSSACGSCRVRGSSVCGVHPCAGFIRVRVPPCAGFIRVRGSSVCGSCRVRGSSVCGVHPCAGPTVCRVHPCAGFIHVRVLPCAGLIRVRGSSVCGVHPCAGPTVCVICVGFIRVRVHPVGFIHVRVLPCAGLIRVRGSSACGVHPCAGFIHVRVLPCAGFIHVRVLPVGGFRVRGSSMCGSCRVRVHPCAGFIHVRVLPCAGLIRVRGSSVCGVHPSIDLVFPLCEVIGLVFPLCEVIGLVFALCEAIGLVFPLCEAIGPVFRLYEAIGPVFLLSEPQVGRERHRERAERLCPAPPRPARPALAPRPAGLWRRTRRAPRPPPLASGAGRAAMDGQPPAGPAAPRWRRRATPRPPPLAWSKPRPQSYQSPSGVLVTDFPVEDRCAFSVTQPDSTRNRSPGSPAMGSVSNGTVRPPGSPALSPDRRSRVLALAPDSPVGSTANGTVSPPGSGQGRRPRPPRNAGLPALAPQQERIVFGASAQPAPCPRAAGPPEEPGIPGRGRAAGPPEEPVVSRGPPAVPCAEPPALLSTHSPAARRVGSQQLIPRSLAESRPAGRAQGHERGLKARSLVETPRPALGSDPEDEPEGGPGALRRGLRSTSYRRAVVSGVDLDGSANCKKKNRMSQPILKAVVEDKEKFSSLGRIKKMLKGQGTFDGEENAVLYQNYKEKALDIDSDEESEPQEQKLDDKVVFHYKPLRSTWSQLSVVKKNGLSEAISQEERKRQEAIFEVISSEHSYLLSLEILIRMFKNSRELSLTMTKTESHHLFSNITDVYEASKKFFEELEARHQNNIFIEDISDIVARHAGSTFDPYVKYCTNEVYQQRTLQRLLATNPAFKEVLSRIESHEECRNLPMISFLILPMQRVTRLPLLMDTICQKTPKDSAKYENCKQALKEVSKLVRLCNEGARKMERTEMMYTINSQLEFKIKPFPLVSSSRWLVKRGELTAYVEDTGLFSKRTSKQQVYFFLFNDVLIITKKKSEESYNVTEYSLREQLLVLPCDGEEPGPGSSPGRSAPGMLHSGRSAASHLFRLLLLSNHAGDRVEMLLGADTQSDRARWITALGQDSDGQHTDRTTLAQVETIRTYTAKQADELSLQVADVVLVYQKVNDGWYEGERLRDGQRGWFPSECAKEITCRATLDKNMERMGRLLGLETNV
SIO_010081: ARHGEF26
subclass of: SO_0000673
so part of: ARHGEF26
location: join(605024..605081,612297..613331,630232..630405,704678..705786,707193..707229,709086..709231,712729..712785,714716..714876,720665..720817,721214..721343,722445..722519,723055..723144,725891..726045,727853..728068,729351..729418,729614..729718,730478..730620)
location: region:605024-730620:1
so has part: feature:605024-605081:1:exon
so has part: feature:612297-613331:1:exon
so has part: feature:630232-630405:1:exon
so has part: feature:704678-705786:1:exon
so has part: feature:707193-707229:1:exon
so has part: feature:709086-709231:1:exon
so has part: feature:712729-712785:1:exon
so has part: feature:714716-714876:1:exon
so has part: feature:720665-720817:1:exon
so has part: feature:721214-721343:1:exon
so has part: feature:722445-722519:1:exon
so has part: feature:723055-723144:1:exon
so has part: feature:725891-726045:1:exon
so has part: feature:727853-728068:1:exon
so has part: feature:729351-729418:1:exon
so has part: feature:729614-729718:1:exon
so has part: feature:730478-730620:1:exon

XP_030810487.1
type: Protein
SIO_000068: ncbiprotein

position:730620:1
position: 730620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605024-605081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612297-613331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630232-630405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704678-705786:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707193-707229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:709086-709231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712729-712785:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714716-714876:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:720665-720817:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:721214-721343:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:722445-722519:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723055-723144:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725891-726045:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:727853-728068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:729351-729418:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:729614-729718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:730478-730620:1:exon

DHX36
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DHX36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(732612..747781)
location: region:732612-747781:-1
so has part: feature:732612-747781:-1:exon
subclass of: SO_0000010

115906848
type: Gene
SIO_000068: ncbigene

position:732612:-1
position: 732612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747781:-1
position: 747781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732612-747781:-1:exon

DHX36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DHX36
product: DEAH-box helicase 36
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954364.1
SIO_010081: DHX36
subclass of: SO_0000673
so part of: DHX36
location: complement(join(732612..733656,734276..734428,734999..735119,735504..735594,735680..735779,735879..735962,736618..736704,736995..737168,737725..737823,738271..738388,738873..739016,739494..739558,739667..739722,740553..740640,740945..741047,741547..741687,742142..742223,742759..742925,743056..743130,744009..744088,744570..744740,745439..745477,746120..746321,747211..747332,747507..747781))
location: region:732612-747781:-1
so has part: feature:747507-747781:-1:exon
so has part: feature:747211-747332:-1:exon
so has part: feature:746120-746321:-1:exon
so has part: feature:745439-745477:-1:exon
so has part: feature:744570-744740:-1:exon
so has part: feature:744009-744088:-1:exon
so has part: feature:743056-743130:-1:exon
so has part: feature:742759-742925:-1:exon
so has part: feature:742142-742223:-1:exon
so has part: feature:741547-741687:-1:exon
so has part: feature:740945-741047:-1:exon
so has part: feature:740553-740640:-1:exon
so has part: feature:739667-739722:-1:exon
so has part: feature:739494-739558:-1:exon
so has part: feature:738873-739016:-1:exon
so has part: feature:738271-738388:-1:exon
so has part: feature:737725-737823:-1:exon
so has part: feature:736995-737168:-1:exon
so has part: feature:736618-736704:-1:exon
so has part: feature:735879-735962:-1:exon
so has part: feature:735680-735779:-1:exon
so has part: feature:735504-735594:-1:exon
so has part: feature:734999-735119:-1:exon
so has part: feature:734276-734428:-1:exon
so has part: feature:732612-733656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:747507-747781:-1:exon

position:747507:-1
position: 747507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747211-747332:-1:exon

position:747211:-1
position: 747211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747332:-1
position: 747332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746120-746321:-1:exon

position:746120:-1
position: 746120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746321:-1
position: 746321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:745439-745477:-1:exon

position:745439:-1
position: 745439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745477:-1
position: 745477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:744570-744740:-1:exon

position:744570:-1
position: 744570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744740:-1
position: 744740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:744009-744088:-1:exon

position:744009:-1
position: 744009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744088:-1
position: 744088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:743056-743130:-1:exon

position:743056:-1
position: 743056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743130:-1
position: 743130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:742759-742925:-1:exon

position:742759:-1
position: 742759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742925:-1
position: 742925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:742142-742223:-1:exon

position:742142:-1
position: 742142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742223:-1
position: 742223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:741547-741687:-1:exon

position:741547:-1
position: 741547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741687:-1
position: 741687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:740945-741047:-1:exon

position:740945:-1
position: 740945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741047:-1
position: 741047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:740553-740640:-1:exon

position:740553:-1
position: 740553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740640:-1
position: 740640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:739667-739722:-1:exon

position:739667:-1
position: 739667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739722:-1
position: 739722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:739494-739558:-1:exon

position:739494:-1
position: 739494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739558:-1
position: 739558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:738873-739016:-1:exon

position:738873:-1
position: 738873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739016:-1
position: 739016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:738271-738388:-1:exon

position:738271:-1
position: 738271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738388:-1
position: 738388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:737725-737823:-1:exon

position:737725:-1
position: 737725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737823:-1
position: 737823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:736995-737168:-1:exon

position:736995:-1
position: 736995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737168:-1
position: 737168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:736618-736704:-1:exon

position:736618:-1
position: 736618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736704:-1
position: 736704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:735879-735962:-1:exon

position:735879:-1
position: 735879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735962:-1
position: 735962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:735680-735779:-1:exon

position:735680:-1
position: 735680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735779:-1
position: 735779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:735504-735594:-1:exon

position:735504:-1
position: 735504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735594:-1
position: 735594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:734999-735119:-1:exon

position:734999:-1
position: 734999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735119:-1
position: 735119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:734276-734428:-1:exon

position:734276:-1
position: 734276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734428:-1
position: 734428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:732612-733656:-1:exon

position:733656:-1
position: 733656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DHX36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent DNA/RNA helicase DHX36
translation: MSYEQRRDWGRGRGRGRGRGGDGGGAAAAATASSAAGGPGGRGRHPGHLKGREIGLWYARRQGQKNRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQPAKVKPNAEKAPVRQTPAWEKTSLDLDVEFLCEKNEQDADLDEQLKEELMKKRSDPRYIEMQRFREKLPSYGMREELVKLINSNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPRRISAISVAERVAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIHIPGFTFPVVEYLLEDVIEKLRYSPEKTDRRLHWRRGFMQGHMSRPEKEEKEEIYRQQWPGYLRQLQGRYSASTISALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNISTLHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPCRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAEHLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIESPHPVDWDDIKSRDTAVLTAIIDLITTQENEGVRNFAPRFQSERYS
SIO_010081: DHX36
subclass of: SO_0000673
so part of: DHX36
location: complement(join(733471..733656,734276..734428,734999..735119,735504..735594,735680..735779,735879..735962,736618..736704,736995..737168,737725..737823,738271..738388,738873..739016,739494..739558,739667..739722,740553..740640,740945..741047,741547..741687,742142..742223,742759..742925,743056..743130,744009..744088,744570..744740,745439..745477,746120..746321,747211..747332,747507..747725))
location: region:733471-747725:-1
so has part: feature:747507-747725:-1:exon
so has part: feature:747211-747332:-1:exon
so has part: feature:746120-746321:-1:exon
so has part: feature:745439-745477:-1:exon
so has part: feature:744570-744740:-1:exon
so has part: feature:744009-744088:-1:exon
so has part: feature:743056-743130:-1:exon
so has part: feature:742759-742925:-1:exon
so has part: feature:742142-742223:-1:exon
so has part: feature:741547-741687:-1:exon
so has part: feature:740945-741047:-1:exon
so has part: feature:740553-740640:-1:exon
so has part: feature:739667-739722:-1:exon
so has part: feature:739494-739558:-1:exon
so has part: feature:738873-739016:-1:exon
so has part: feature:738271-738388:-1:exon
so has part: feature:737725-737823:-1:exon
so has part: feature:736995-737168:-1:exon
so has part: feature:736618-736704:-1:exon
so has part: feature:735879-735962:-1:exon
so has part: feature:735680-735779:-1:exon
so has part: feature:735504-735594:-1:exon
so has part: feature:734999-735119:-1:exon
so has part: feature:734276-734428:-1:exon
so has part: feature:733471-733656:-1:exon

XP_030810224.1
type: Protein
SIO_000068: ncbiprotein

position:733471:-1
position: 733471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747725:-1
position: 747725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747507-747725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747211-747332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746120-746321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745439-745477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744570-744740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744009-744088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:743056-743130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:742759-742925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:742142-742223:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:741547-741687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740945-741047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:740553-740640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739667-739722:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739494-739558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738873-739016:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:738271-738388:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737725-737823:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:736995-737168:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736618-736704:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:735879-735962:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:735680-735779:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:735504-735594:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:734999-735119:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:734276-734428:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:733471-733656:-1:exon

GPR149
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPR149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(748662..759593)
location: region:748662-759593:-1
so has part: feature:748662-759593:-1:exon
subclass of: SO_0000010

115906866
type: Gene
SIO_000068: ncbigene

position:748662:-1
position: 748662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759593:-1
position: 759593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748662-759593:-1:exon

GPR149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPR149
product: G protein-coupled receptor 149
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_030954394.1
SIO_010081: GPR149
subclass of: SO_0000673
so part of: GPR149
location: complement(join(748662..749216,756629..756999,757608..757800,758673..759593))
location: region:748662-759593:-1
so has part: feature:758673-759593:-1:exon
so has part: feature:757608-757800:-1:exon
so has part: feature:756629-756999:-1:exon
so has part: feature:748662-749216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758673-759593:-1:exon

position:758673:-1
position: 758673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757608-757800:-1:exon

position:757608:-1
position: 757608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757800:-1
position: 757800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756629-756999:-1:exon

position:756629:-1
position: 756629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756999:-1
position: 756999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748662-749216:-1:exon

position:749216:-1
position: 749216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPR149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 149
translation: MPRTMSVTPGNLSLNGTSFLTEHHSIMDKPSEQRTWNVFLFWLTFAIALPALLGSIYSLVSLLKLQTKSTVSMIVTSLAADDLISIVPVIIFMLMQWSSEVLPQPLCTTSAFLYLFQGISSNLKGSLIVSYNFYTLSTPGTLSCSSSKRRVSVAWAVLTIWTASLLLCILPLCGWGRYIRTSWGCFADCASPYILFVLVVYSLCFSLLAALAAPLTLQLLCSGEPQLPRTEPLPGSAGCGCPGAPPLPPRPEPGDRAREPCRASAALFGTGVAESRAQSRSSTVGLAQKRFSLILALTKVLLWLPMMIQMAVQYTTGLQSLSLEALSFLLTVLAAAVTPVFVLSQHWLHLPCGCVINCRRSSCAVPSPGAKTKRGGFEFNLSFQQGCGIYRISLESPPHGSRDGKPSSYPSLVGCACGEPGRGRDSLGHTGTGALGHGPQGTPAAGPGPGQHQQGTSTGPFPEGAEWRLCHQESRAPELSDWEWCRSRSERNPRQRTGGALAVPLCAFQGTVSLQAPGGKTLSLSTYEVSSEGQKIAPTAKKIEVYRSKSVGHEPSPGEPGFADTSVKIHLEVLEICDTPEALDTVSIVSSISQSSAHARSPSLRYSRKENRFVSCELGESASYSLLVPSNSDFSISIPDTVEAHRRNSQQQLSARAGYQEEIQLLNKAYREREETGSS
SIO_010081: GPR149
subclass of: SO_0000673
so part of: GPR149
location: complement(join(748662..749216,756629..756999,757608..757800,758673..759593))
location: region:748662-759593:-1
so has part: feature:758673-759593:-1:exon
so has part: feature:757608-757800:-1:exon
so has part: feature:756629-756999:-1:exon
so has part: feature:748662-749216:-1:exon

XP_030810254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:758673-759593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757608-757800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756629-756999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748662-749216:-1:exon

MME
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MME
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 804540..837657
location: region:804540-837657:1
so has part: feature:804540-837657:1:exon
subclass of: SO_0000010

115906865
type: Gene
SIO_000068: ncbigene

position:804540:1
position: 804540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837657:1
position: 837657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804540-837657:1:exon

MME
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MME
product: membrane metalloendopeptidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954392.1
SIO_010081: MME
subclass of: SO_0000673
so part of: MME
location: join(804540..804639,808041..808210,809395..809430,813090..813251,815439..815519,816212..816307,816408..816526,817228..817293,819873..820007,821329..821430,822972..823108,823195..823288,823947..824075,825485..825583,826095..826175,827394..827497,827671..827729,829712..829831,830048..830181,831098..831163,833240..833335,833738..833814,836302..837657)
location: region:804540-837657:1
so has part: feature:804540-804639:1:exon
so has part: feature:808041-808210:1:exon
so has part: feature:809395-809430:1:exon
so has part: feature:813090-813251:1:exon
so has part: feature:815439-815519:1:exon
so has part: feature:816212-816307:1:exon
so has part: feature:816408-816526:1:exon
so has part: feature:817228-817293:1:exon
so has part: feature:819873-820007:1:exon
so has part: feature:821329-821430:1:exon
so has part: feature:822972-823108:1:exon
so has part: feature:823195-823288:1:exon
so has part: feature:823947-824075:1:exon
so has part: feature:825485-825583:1:exon
so has part: feature:826095-826175:1:exon
so has part: feature:827394-827497:1:exon
so has part: feature:827671-827729:1:exon
so has part: feature:829712-829831:1:exon
so has part: feature:830048-830181:1:exon
so has part: feature:831098-831163:1:exon
so has part: feature:833240-833335:1:exon
so has part: feature:833738-833814:1:exon
so has part: feature:836302-837657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804540-804639:1:exon

position:804639:1
position: 804639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808041-808210:1:exon

position:808041:1
position: 808041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808210:1
position: 808210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809395-809430:1:exon

position:809395:1
position: 809395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809430:1
position: 809430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:813090-813251:1:exon

position:813090:1
position: 813090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813251:1
position: 813251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:815439-815519:1:exon

position:815439:1
position: 815439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815519:1
position: 815519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:816212-816307:1:exon

position:816212:1
position: 816212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816307:1
position: 816307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:816408-816526:1:exon

position:816408:1
position: 816408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816526:1
position: 816526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:817228-817293:1:exon

position:817228:1
position: 817228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817293:1
position: 817293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:819873-820007:1:exon

position:819873:1
position: 819873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820007:1
position: 820007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:821329-821430:1:exon

position:821329:1
position: 821329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821430:1
position: 821430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:822972-823108:1:exon

position:822972:1
position: 822972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823108:1
position: 823108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:823195-823288:1:exon

position:823195:1
position: 823195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823288:1
position: 823288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:823947-824075:1:exon

position:823947:1
position: 823947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824075:1
position: 824075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:825485-825583:1:exon

position:825485:1
position: 825485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825583:1
position: 825583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:826095-826175:1:exon

position:826095:1
position: 826095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826175:1
position: 826175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:827394-827497:1:exon

position:827394:1
position: 827394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827497:1
position: 827497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:827671-827729:1:exon

position:827671:1
position: 827671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827729:1
position: 827729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:829712-829831:1:exon

position:829712:1
position: 829712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829831:1
position: 829831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:830048-830181:1:exon

position:830048:1
position: 830048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830181:1
position: 830181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:831098-831163:1:exon

position:831098:1
position: 831098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831163:1
position: 831163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:833240-833335:1:exon

position:833240:1
position: 833240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833335:1
position: 833335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:833738-833814:1:exon

position:833738:1
position: 833738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833814:1
position: 833814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:836302-837657:1:exon

position:836302:1
position: 836302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MME
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MME
product: membrane metalloendopeptidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954393.1
SIO_010081: MME
subclass of: SO_0000673
so part of: MME
location: join(807750..807812,808041..808210,809395..809430,813090..813251,815439..815519,816212..816307,816408..816526,817228..817293,819873..820007,821329..821430,822972..823108,823195..823288,823947..824075,825485..825583,826095..826175,827394..827497,827671..827729,829712..829831,830048..830181,831098..831163,833240..833335,833738..833814,836302..837657)
location: region:807750-837657:1
so has part: feature:807750-807812:1:exon
so has part: feature:808041-808210:1:exon
so has part: feature:809395-809430:1:exon
so has part: feature:813090-813251:1:exon
so has part: feature:815439-815519:1:exon
so has part: feature:816212-816307:1:exon
so has part: feature:816408-816526:1:exon
so has part: feature:817228-817293:1:exon
so has part: feature:819873-820007:1:exon
so has part: feature:821329-821430:1:exon
so has part: feature:822972-823108:1:exon
so has part: feature:823195-823288:1:exon
so has part: feature:823947-824075:1:exon
so has part: feature:825485-825583:1:exon
so has part: feature:826095-826175:1:exon
so has part: feature:827394-827497:1:exon
so has part: feature:827671-827729:1:exon
so has part: feature:829712-829831:1:exon
so has part: feature:830048-830181:1:exon
so has part: feature:831098-831163:1:exon
so has part: feature:833240-833335:1:exon
so has part: feature:833738-833814:1:exon
so has part: feature:836302-837657:1:exon

position:807750:1
position: 807750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807750-807812:1:exon

position:807812:1
position: 807812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808041-808210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809395-809430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:813090-813251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:815439-815519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:816212-816307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:816408-816526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817228-817293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819873-820007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821329-821430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:822972-823108:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823195-823288:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:823947-824075:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:825485-825583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826095-826175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:827394-827497:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:827671-827729:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:829712-829831:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:830048-830181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:831098-831163:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:833240-833335:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:833738-833814:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:836302-837657:1:exon

MME
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MME
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neprilysin
translation: MGKSESQMDITEMNAPKPKKKLGWSGLEIGLAVVVLLLAIVAITMIVLYATYDDGICKTPDCIKSAARILENMDPSARPCQDFYQYACGGWLKRNVIPETSSRYSNFDILRDELEVVLKDVLDTPSTNDIPAVQKAKTLYRSCINETAIDLRGGSPLISLLPNVSEWPVATTNWDDSYGTAWTAETAIAQLNSRYGKKVLINFFVGTDDKNSTAHIIHIDQPGLGLPSRDYYECTGAYQEACSAYVDFMTSVAKLIRQERNISVNESDISAQMRRVMDLEKEIANATTKSEDRNDPLLLYNKMTLAQLQKNFSLVINHKEFNWSEFINAIMSTVQINVDNTEHVIVYDPDYLLNLRSILEKYSSRDLQNYMAWRFVMDLVNSLSRDYKDTRNAFRKALYGTTSESAVWRRCANYVNGNMESAVGRLYVEEAFAGDSKHVVEEMIADIRDVFIKTLDELPWMDAETKKRAEQKAIAIKERIGYPDEIVTDDDKLNSEYQELNYKEEEYFENIIQNLVFTQKKRLKKLREKVDKEEWISGAAVVNAFYSASRNQIVFPAGILQPPFFSASQPRSLNYGGIGMVIGHEITHGFDDNGRNFNEDGDLVDWWSEESARNFKELSQCMVYQYGNFSWDLAGGQNLSGINTLGENIADNGGVRQAYKAYENFERKHGKEKLLPGLDMNHKQLFFLNFAQVWCGTYRPEYAVNSIKTDVHSPGRFRVLGSLQNSPEFSEAFSCTTRDNMDPAKKCRVW
SIO_010081: MME
subclass of: SO_0000673
so part of: MME
location: join(808051..808210,809395..809430,813090..813251,815439..815519,816212..816307,816408..816526,817228..817293,819873..820007,821329..821430,822972..823108,823195..823288,823947..824075,825485..825583,826095..826175,827394..827497,827671..827729,829712..829831,830048..830181,831098..831163,833240..833335,833738..833814,836302..836401)
location: region:808051-836401:1
so has part: feature:808051-808210:1:exon
so has part: feature:809395-809430:1:exon
so has part: feature:813090-813251:1:exon
so has part: feature:815439-815519:1:exon
so has part: feature:816212-816307:1:exon
so has part: feature:816408-816526:1:exon
so has part: feature:817228-817293:1:exon
so has part: feature:819873-820007:1:exon
so has part: feature:821329-821430:1:exon
so has part: feature:822972-823108:1:exon
so has part: feature:823195-823288:1:exon
so has part: feature:823947-824075:1:exon
so has part: feature:825485-825583:1:exon
so has part: feature:826095-826175:1:exon
so has part: feature:827394-827497:1:exon
so has part: feature:827671-827729:1:exon
so has part: feature:829712-829831:1:exon
so has part: feature:830048-830181:1:exon
so has part: feature:831098-831163:1:exon
so has part: feature:833240-833335:1:exon
so has part: feature:833738-833814:1:exon
so has part: feature:836302-836401:1:exon

XP_030810252.1
type: Protein
SIO_000068: ncbiprotein

position:808051:1
position: 808051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836401:1
position: 836401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808051-808210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809395-809430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:813090-813251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815439-815519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:816212-816307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:816408-816526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817228-817293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819873-820007:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821329-821430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:822972-823108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:823195-823288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823947-824075:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:825485-825583:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:826095-826175:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:827394-827497:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:827671-827729:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:829712-829831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:830048-830181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:831098-831163:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:833240-833335:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:833738-833814:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:836302-836401:1:exon

MME
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MME
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neprilysin
translation: MGKSESQMDITEMNAPKPKKKLGWSGLEIGLAVVVLLLAIVAITMIVLYATYDDGICKTPDCIKSAARILENMDPSARPCQDFYQYACGGWLKRNVIPETSSRYSNFDILRDELEVVLKDVLDTPSTNDIPAVQKAKTLYRSCINETAIDLRGGSPLISLLPNVSEWPVATTNWDDSYGTAWTAETAIAQLNSRYGKKVLINFFVGTDDKNSTAHIIHIDQPGLGLPSRDYYECTGAYQEACSAYVDFMTSVAKLIRQERNISVNESDISAQMRRVMDLEKEIANATTKSEDRNDPLLLYNKMTLAQLQKNFSLVINHKEFNWSEFINAIMSTVQINVDNTEHVIVYDPDYLLNLRSILEKYSSRDLQNYMAWRFVMDLVNSLSRDYKDTRNAFRKALYGTTSESAVWRRCANYVNGNMESAVGRLYVEEAFAGDSKHVVEEMIADIRDVFIKTLDELPWMDAETKKRAEQKAIAIKERIGYPDEIVTDDDKLNSEYQELNYKEEEYFENIIQNLVFTQKKRLKKLREKVDKEEWISGAAVVNAFYSASRNQIVFPAGILQPPFFSASQPRSLNYGGIGMVIGHEITHGFDDNGRNFNEDGDLVDWWSEESARNFKELSQCMVYQYGNFSWDLAGGQNLSGINTLGENIADNGGVRQAYKAYENFERKHGKEKLLPGLDMNHKQLFFLNFAQVWCGTYRPEYAVNSIKTDVHSPGRFRVLGSLQNSPEFSEAFSCTTRDNMDPAKKCRVW
SIO_010081: MME
subclass of: SO_0000673
so part of: MME
location: join(808051..808210,809395..809430,813090..813251,815439..815519,816212..816307,816408..816526,817228..817293,819873..820007,821329..821430,822972..823108,823195..823288,823947..824075,825485..825583,826095..826175,827394..827497,827671..827729,829712..829831,830048..830181,831098..831163,833240..833335,833738..833814,836302..836401)
location: region:808051-836401:1
so has part: feature:808051-808210:1:exon
so has part: feature:809395-809430:1:exon
so has part: feature:813090-813251:1:exon
so has part: feature:815439-815519:1:exon
so has part: feature:816212-816307:1:exon
so has part: feature:816408-816526:1:exon
so has part: feature:817228-817293:1:exon
so has part: feature:819873-820007:1:exon
so has part: feature:821329-821430:1:exon
so has part: feature:822972-823108:1:exon
so has part: feature:823195-823288:1:exon
so has part: feature:823947-824075:1:exon
so has part: feature:825485-825583:1:exon
so has part: feature:826095-826175:1:exon
so has part: feature:827394-827497:1:exon
so has part: feature:827671-827729:1:exon
so has part: feature:829712-829831:1:exon
so has part: feature:830048-830181:1:exon
so has part: feature:831098-831163:1:exon
so has part: feature:833240-833335:1:exon
so has part: feature:833738-833814:1:exon
so has part: feature:836302-836401:1:exon

XP_030810253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:808051-808210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809395-809430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:813090-813251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815439-815519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:816212-816307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:816408-816526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817228-817293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819873-820007:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821329-821430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:822972-823108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:823195-823288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823947-824075:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:825485-825583:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:826095-826175:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:827394-827497:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:827671-827729:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:829712-829831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:830048-830181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:831098-831163:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:833240-833335:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:833738-833814:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:836302-836401:1:exon

STRIT1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: STRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(842434..844125)
location: region:842434-844125:-1
so has part: feature:842434-844125:-1:exon
subclass of: SO_0000010

115906867
type: Gene
SIO_000068: ncbigene

position:842434:-1
position: 842434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844125:-1
position: 844125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842434-844125:-1:exon

STRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STRIT1
product: small transmembrane regulator of ion transport 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_030954395.1
SIO_010081: STRIT1
subclass of: SO_0000673
so part of: STRIT1
location: complement(join(842434..842528,844113..844125))
location: region:842434-844125:-1
so has part: feature:844113-844125:-1:exon
so has part: feature:842434-842528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:844113-844125:-1:exon

position:844113:-1
position: 844113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842434-842528:-1:exon

position:842528:-1
position: 842528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF
translation: MAEPAQAPLSRLLVPVLLALGWILGCALMVYIVFS
SIO_010081: STRIT1
subclass of: SO_0000673
so part of: STRIT1
location: complement(join(842434..842528,844113..844125))
location: region:842434-844125:-1
so has part: feature:844113-844125:-1:exon
so has part: feature:842434-842528:-1:exon

XP_030810255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:844113-844125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842434-842528:-1:exon

PLCH1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PLCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(867778..924848)
location: region:867778-924848:-1
so has part: feature:867778-924848:-1:exon
subclass of: SO_0000010

115907007
type: Gene
SIO_000068: ncbigene

position:867778:-1
position: 867778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924848:-1
position: 924848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867778-924848:-1:exon

PLCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PLCH1
product: phospholipase C eta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954628.1
SIO_010081: PLCH1
subclass of: SO_0000673
so part of: PLCH1
location: complement(join(867778..870044,870825..871185,872975..873054,873449..873595,874092..874176,874597..874721,875246..875353,875445..875624,876236..876333,876966..877060,879969..880040,881142..881303,881883..881990,883478..883649,884523..884643,886163..886366,887573..887666,889540..889710,891180..891309,892531..892774,893103..893249,912325..912442,924718..924848))
location: region:867778-924848:-1
so has part: feature:924718-924848:-1:exon
so has part: feature:912325-912442:-1:exon
so has part: feature:893103-893249:-1:exon
so has part: feature:892531-892774:-1:exon
so has part: feature:891180-891309:-1:exon
so has part: feature:889540-889710:-1:exon
so has part: feature:887573-887666:-1:exon
so has part: feature:886163-886366:-1:exon
so has part: feature:884523-884643:-1:exon
so has part: feature:883478-883649:-1:exon
so has part: feature:881883-881990:-1:exon
so has part: feature:881142-881303:-1:exon
so has part: feature:879969-880040:-1:exon
so has part: feature:876966-877060:-1:exon
so has part: feature:876236-876333:-1:exon
so has part: feature:875445-875624:-1:exon
so has part: feature:875246-875353:-1:exon
so has part: feature:874597-874721:-1:exon
so has part: feature:874092-874176:-1:exon
so has part: feature:873449-873595:-1:exon
so has part: feature:872975-873054:-1:exon
so has part: feature:870825-871185:-1:exon
so has part: feature:867778-870044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:924718-924848:-1:exon

position:924718:-1
position: 924718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:912325-912442:-1:exon

position:912325:-1
position: 912325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912442:-1
position: 912442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893103-893249:-1:exon

position:893103:-1
position: 893103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893249:-1
position: 893249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892531-892774:-1:exon

position:892531:-1
position: 892531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892774:-1
position: 892774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891180-891309:-1:exon

position:891180:-1
position: 891180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891309:-1
position: 891309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889540-889710:-1:exon

position:889540:-1
position: 889540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889710:-1
position: 889710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:887573-887666:-1:exon

position:887573:-1
position: 887573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887666:-1
position: 887666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:886163-886366:-1:exon

position:886163:-1
position: 886163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886366:-1
position: 886366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:884523-884643:-1:exon

position:884523:-1
position: 884523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884643:-1
position: 884643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:883478-883649:-1:exon

position:883478:-1
position: 883478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883649:-1
position: 883649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:881883-881990:-1:exon

position:881883:-1
position: 881883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881990:-1
position: 881990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:881142-881303:-1:exon

position:881142:-1
position: 881142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881303:-1
position: 881303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:879969-880040:-1:exon

position:879969:-1
position: 879969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880040:-1
position: 880040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:876966-877060:-1:exon

position:876966:-1
position: 876966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877060:-1
position: 877060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:876236-876333:-1:exon

position:876236:-1
position: 876236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876333:-1
position: 876333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:875445-875624:-1:exon

position:875445:-1
position: 875445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875624:-1
position: 875624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:875246-875353:-1:exon

position:875246:-1
position: 875246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875353:-1
position: 875353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:874597-874721:-1:exon

position:874597:-1
position: 874597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874721:-1
position: 874721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:874092-874176:-1:exon

position:874092:-1
position: 874092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874176:-1
position: 874176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:873449-873595:-1:exon

position:873449:-1
position: 873449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873595:-1
position: 873595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:872975-873054:-1:exon

position:872975:-1
position: 872975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873054:-1
position: 873054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:870825-871185:-1:exon

position:870825:-1
position: 870825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871185:-1
position: 871185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:867778-870044:-1:exon

position:870044:-1
position: 870044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PLCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
translation: MSYWSLDKKSCLQYCRHFLADNGVFHVERCMSVMQSGTQMVKLKSGTKGLVRLFYLDEHRTCIRWRPSRKSEKAKIVIDSIYKVSEGRQSEIFHRHAEGSFDPSCCFTIYHGNHLESLDLITSNPEEARTWITGLKYLLAGISDEDSLAKRQRTHDHWVKQTFEEADKNGDGLLNIEEIHQLMHKLNVSLPRRKVRQMFQEADTDENQGTLNFEEFSVFYKMMSLRRDLYLLLLSYSDKKDHLTAEELAQFLRVEQKMNNVTPEYCLDIIQKFEVSEENKKQNVLGIEGFTSFMRSPACEVSNPLHRQVHQDMQQPLCHYFIASSHNTYLSGDQLLSQSRADMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLTSKILFRDVAETINKYAFIKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVSTGDPRQLPSPQDLKGKILVKGKKLPCSLGADAEEGEVSEEDSADEIEDDCKLKPCFSNGATQHQVESFIRTKLESLLKESQIRDKEDPDSFTVRALLKATHQSFSVNLKQNLDPKEGGKKSHGRSLMGNFSKHKRAAKAAAKAHSASDDEDGQQHPPGKELGQPHRLARRRKTVKLCRALSDLVVYTNSVAAQDIVDDGSTGNVLSFSETRAHQAVQQKAEQFMLYNQRQLTRVYPSAYRIDSSNFNPVPYWNVGCQLVALNYQSEGRVMQLNEAKFRVNGNCGYVLKPQQMCKGTFNPYSADPLPASPKKQLILKIISGQQLPKPPDSMLGDRGEIIDPFVEVEIIGLPVDCCKDQTRVVDDNGFNPVWEETLTFTIHMPEIALVRFLVWDHDPIGRDFVGQRTVAFSSLVPGYRHVYLEGLTEASIFVHIIINETYGKSKQLMGLRGLFSKAPKAGTAEASGHHVRKRSIGERILRRTASAPAKGRKKSKMGFLEAAEMKDSASEPADLKDKEGVLRRPNRPSQARPASMPVDRFLMVELPCPAEDTAQEAEGEDNTSANSDDNTNEKETSLKELGFPHSEQKSNASNLASQFKKENDQRDSTAACLVPPPQEQPEHLIFANGVAQANHLVDYQENNLSDGTVPLTQDSDSELPTEKLHHKNCADCKKEDDTKGSKEGKISLMGTSVSQSTEVENHKCDTKKSSAAPLSPSSAMCSESPDCHSTVALQDSDISHLIDEVSLSTESELDSAVSTLIGQLDGTDEQTPLPPVSSPHGSSSQTPRVGNAVPHVFAADLNSPCRHNFTPTKSNKSSLFSTPDTAMFSSLEEAEYSTYTVLHEASPASECKSHRALVCKKRLNSLESNLPSSSCSSSLSLLNANPKRNCATKCGPSWEAPEPASSFGSNSLVFEEVLGHPVPGEHSASSSLLELDGDRQELLVTAREYRREDMSQLASPVSLRQRQEPGHGGDRSSGSSSTGHGGDRSSGSSSTGGDRTSGSSSTSGDRTSGSSSTSGDRTSGSSSTGSSSTAAPCAAARHRSGTCGAAGSQLAVPACESAGGSWQQPSEKHRAAVCAPQAGSACPLRPGALPFPTHPAIQHSSPCKSKSLGDLTSEDISCNFESKYQYISRSFISSGLRDGKLAAMQGVRPHSTDALTEQLRRLLSPEQEDGREPLCPRQPDEDCPRALVRKLSSRSQSRVRNIASRARERQEAAGKPRPCGGSAVPGVVLRSKAPGPPLAANRHSTGSCIGRYLRGCPGERRGVPEGACSALQHGCGELQHGCGELHGCGELHGCGELPLPPGAQEQPEIYFLLRL
SIO_010081: PLCH1
subclass of: SO_0000673
so part of: PLCH1
location: complement(join(867778..870044,870825..871185,872975..873054,873449..873595,874092..874176,874597..874721,875246..875353,875445..875624,876236..876333,876966..877060,879969..880040,881142..881303,881883..881990,883478..883649,884523..884643,886163..886366,887573..887666,889540..889710,891180..891309,892531..892774,893103..893249,912325..912403))
location: region:867778-912403:-1
so has part: feature:912325-912403:-1:exon
so has part: feature:893103-893249:-1:exon
so has part: feature:892531-892774:-1:exon
so has part: feature:891180-891309:-1:exon
so has part: feature:889540-889710:-1:exon
so has part: feature:887573-887666:-1:exon
so has part: feature:886163-886366:-1:exon
so has part: feature:884523-884643:-1:exon
so has part: feature:883478-883649:-1:exon
so has part: feature:881883-881990:-1:exon
so has part: feature:881142-881303:-1:exon
so has part: feature:879969-880040:-1:exon
so has part: feature:876966-877060:-1:exon
so has part: feature:876236-876333:-1:exon
so has part: feature:875445-875624:-1:exon
so has part: feature:875246-875353:-1:exon
so has part: feature:874597-874721:-1:exon
so has part: feature:874092-874176:-1:exon
so has part: feature:873449-873595:-1:exon
so has part: feature:872975-873054:-1:exon
so has part: feature:870825-871185:-1:exon
so has part: feature:867778-870044:-1:exon

XP_030810488.1
type: Protein
SIO_000068: ncbiprotein

position:912403:-1
position: 912403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912325-912403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893103-893249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892531-892774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891180-891309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889540-889710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:887573-887666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:886163-886366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884523-884643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883478-883649:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:881883-881990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881142-881303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:879969-880040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:876966-877060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:876236-876333:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:875445-875624:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:875246-875353:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:874597-874721:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:874092-874176:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:873449-873595:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:872975-873054:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:870825-871185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867778-870044:-1:exon

C9H3orf33
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: C9H3orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(927627..933399)
location: region:927627-933399:-1
so has part: feature:927627-933399:-1:exon
subclass of: SO_0000010

115907008
type: Gene
SIO_000068: ncbigene

position:927627:-1
position: 927627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933399:-1
position: 933399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927627-933399:-1:exon

C9H3orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C9H3orf33
product: chromosome 9 C3orf33 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954629.1
SIO_010081: C9H3orf33
subclass of: SO_0000673
so part of: C9H3orf33
location: complement(join(927627..928760,929390..929550,930250..930403,933159..933218,933307..933399))
location: region:927627-933399:-1
so has part: feature:933307-933399:-1:exon
so has part: feature:933159-933218:-1:exon
so has part: feature:930250-930403:-1:exon
so has part: feature:929390-929550:-1:exon
so has part: feature:927627-928760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933307-933399:-1:exon

position:933307:-1
position: 933307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933159-933218:-1:exon

position:933159:-1
position: 933159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933218:-1
position: 933218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930250-930403:-1:exon

position:930250:-1
position: 930250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930403:-1
position: 930403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:929390-929550:-1:exon

position:929390:-1
position: 929390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929550:-1
position: 929550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:927627-928760:-1:exon

position:928760:-1
position: 928760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C9H3orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C9H3orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C3orf33 homolog
translation: MSERGGGGSERAALALARLSEWADAHLGLLRGLIAGAAVAGVLLLARSLRVTTKFTNPLEIPVEFVEKNVKLRGKLHHITEKGLEVEHIPISIPFISAIQRKWQPEGLLLIRLAGVELAAGGTAWLQRELLPKQPLWFQLLGRDSSALDCLVLVHKGGFFSMCLNEELLSQGLARAARIEGLPHHSRLYWKLHKRLLRAELKAVKKNKGIWKEQSYSERVQERISSNKFLQRLKQFVSWVRSSTER
SIO_010081: C9H3orf33
subclass of: SO_0000673
so part of: C9H3orf33
location: complement(join(928488..928760,929390..929550,930250..930403,933159..933218,933307..933399))
location: region:928488-933399:-1
so has part: feature:933307-933399:-1:exon
so has part: feature:933159-933218:-1:exon
so has part: feature:930250-930403:-1:exon
so has part: feature:929390-929550:-1:exon
so has part: feature:928488-928760:-1:exon

XP_030810489.1
type: Protein
SIO_000068: ncbiprotein

position:928488:-1
position: 928488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933307-933399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933159-933218:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930250-930403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929390-929550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:928488-928760:-1:exon

SLC33A1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC33A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(934875..945244)
location: region:934875-945244:-1
so has part: feature:934875-945244:-1:exon
subclass of: SO_0000010

115906818
type: Gene
SIO_000068: ncbigene

position:934875:-1
position: 934875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945244:-1
position: 945244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934875-945244:-1:exon

SLC33A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC33A1
product: solute carrier family 33 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954315.1
SIO_010081: SLC33A1
subclass of: SO_0000673
so part of: SLC33A1
location: complement(join(934875..936257,937886..938101,939361..939545,944506..945244))
location: region:934875-945244:-1
so has part: feature:944506-945244:-1:exon
so has part: feature:939361-939545:-1:exon
so has part: feature:937886-938101:-1:exon
so has part: feature:934875-936257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944506-945244:-1:exon

position:944506:-1
position: 944506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939361-939545:-1:exon

position:939361:-1
position: 939361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939545:-1
position: 939545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937886-938101:-1:exon

position:937886:-1
position: 937886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938101:-1
position: 938101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934875-936257:-1:exon

position:936257:-1
position: 936257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC33A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC33A1
product: solute carrier family 33 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954314.1
SIO_010081: SLC33A1
subclass of: SO_0000673
so part of: SLC33A1
location: complement(join(934884..936257,937886..938101,938844..938961,939361..939545,940167..940357,944506..945244))
location: region:934884-945244:-1
so has part: feature:944506-945244:-1:exon
so has part: feature:940167-940357:-1:exon
so has part: feature:939361-939545:-1:exon
so has part: feature:938844-938961:-1:exon
so has part: feature:937886-938101:-1:exon
so has part: feature:934884-936257:-1:exon

position:934884:-1
position: 934884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944506-945244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940167-940357:-1:exon

position:940167:-1
position: 940167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940357:-1
position: 940357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:939361-939545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938844-938961:-1:exon

position:938844:-1
position: 938844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938961:-1
position: 938961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:937886-938101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934884-936257:-1:exon

SLC33A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC33A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A transporter 1 isoform X2
translation: MAPAIAAEEGGRQRRAATRQHSLDLTGDPPPDGLPGDTEALLPAPARARGYRAELGSILLLLVLYVLQGIPLGLAGSVPLILQSKSASYTDQAFFSFVFWPFSLKLLWAPLVDAVYLRGFGRRKSWLVPTQYVLGLFMIYMSTQVDALLGDGHGRGPDVAALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESASFCNKYLRFEPQPRGIVTLSDWVFSSRCCNRTQTGGGGSPQGAPGSAGSSNGSSADHLASGYQQIHSGPPAPEHLLQSNALQITLYSMYVAIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECAGAQGHTCATAAATELCTAAGGSCVTALDGYYVESIICVILGFAWWFFLGPKFKKLQDEGQSSWKCKRSN
SIO_010081: SLC33A1
subclass of: SO_0000673
so part of: SLC33A1
location: complement(join(936090..936257,937886..938101,939361..939545,944506..945229))
location: region:936090-945229:-1
so has part: feature:944506-945229:-1:exon
so has part: feature:939361-939545:-1:exon
so has part: feature:937886-938101:-1:exon
so has part: feature:936090-936257:-1:exon

XP_030810175.1
type: Protein
SIO_000068: ncbiprotein

position:936090:-1
position: 936090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945229:-1
position: 945229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944506-945229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939361-939545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937886-938101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:936090-936257:-1:exon

SLC33A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC33A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A transporter 1 isoform X1
translation: MAPAIAAEEGGRQRRAATRQHSLDLTGDPPPDGLPGDTEALLPAPARARGYRAELGSILLLLVLYVLQGIPLGLAGSVPLILQSKSASYTDQAFFSFVFWPFSLKLLWAPLVDAVYLRGFGRRKSWLVPTQYVLGLFMIYMSTQVDALLGDGHGRGPDVAALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESASFCNKYLRFEPQPRGIVTLSDFLFFWGAVFLVTTTLVAFLKKENEELIPAKEETKGITDTYRLLFSIIKMPAVLTFCLLILTSKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLVISKYTAGPQPLNTFYKAMPYRLLLGLEFAFLVWWAPKVKHEGGFPVYYYAVVVLSYALHQITLYSMYVAIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECAGAQGHTCATAAATELCTAAGGSCVTALDGYYVESIICVILGFAWWFFLGPKFKKLQDEGQSSWKCKRSN
SIO_010081: SLC33A1
subclass of: SO_0000673
so part of: SLC33A1
location: complement(join(936090..936257,937886..938101,938844..938961,939361..939545,940167..940357,944506..945229))
location: region:936090-945229:-1
so has part: feature:944506-945229:-1:exon
so has part: feature:940167-940357:-1:exon
so has part: feature:939361-939545:-1:exon
so has part: feature:938844-938961:-1:exon
so has part: feature:937886-938101:-1:exon
so has part: feature:936090-936257:-1:exon

XP_030810174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:944506-945229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940167-940357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:939361-939545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938844-938961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937886-938101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936090-936257:-1:exon

GMPS
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GMPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 946349..975413
location: region:946349-975413:1
so has part: feature:946349-975413:1:exon
subclass of: SO_0000010

115906890
type: Gene
SIO_000068: ncbigene

position:946349:1
position: 946349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975413:1
position: 975413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946349-975413:1:exon

GMPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GMPS
product: guanine monophosphate synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954422.1
SIO_010081: GMPS
subclass of: SO_0000673
so part of: GMPS
location: join(946349..946477,951018..951199,954805..954919,956129..956226,957107..957210,957849..958042,958652..958817,960274..960425,960798..960971,961879..961984,962505..962620,963558..963683,965849..965964,967247..967377,969976..970148,972061..975413)
location: region:946349-975413:1
so has part: feature:946349-946477:1:exon
so has part: feature:951018-951199:1:exon
so has part: feature:954805-954919:1:exon
so has part: feature:956129-956226:1:exon
so has part: feature:957107-957210:1:exon
so has part: feature:957849-958042:1:exon
so has part: feature:958652-958817:1:exon
so has part: feature:960274-960425:1:exon
so has part: feature:960798-960971:1:exon
so has part: feature:961879-961984:1:exon
so has part: feature:962505-962620:1:exon
so has part: feature:963558-963683:1:exon
so has part: feature:965849-965964:1:exon
so has part: feature:967247-967377:1:exon
so has part: feature:969976-970148:1:exon
so has part: feature:972061-975413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946349-946477:1:exon

position:946477:1
position: 946477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:951018-951199:1:exon

position:951018:1
position: 951018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951199:1
position: 951199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:954805-954919:1:exon

position:954805:1
position: 954805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954919:1
position: 954919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:956129-956226:1:exon

position:956129:1
position: 956129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956226:1
position: 956226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:957107-957210:1:exon

position:957107:1
position: 957107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957210:1
position: 957210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:957849-958042:1:exon

position:957849:1
position: 957849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958042:1
position: 958042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:958652-958817:1:exon

position:958652:1
position: 958652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958817:1
position: 958817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:960274-960425:1:exon

position:960274:1
position: 960274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960425:1
position: 960425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:960798-960971:1:exon

position:960798:1
position: 960798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960971:1
position: 960971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:961879-961984:1:exon

position:961879:1
position: 961879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961984:1
position: 961984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:962505-962620:1:exon

position:962505:1
position: 962505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962620:1
position: 962620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:963558-963683:1:exon

position:963558:1
position: 963558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963683:1
position: 963683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:965849-965964:1:exon

position:965849:1
position: 965849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965964:1
position: 965964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:967247-967377:1:exon

position:967247:1
position: 967247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967377:1
position: 967377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:969976-970148:1:exon

position:969976:1
position: 969976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970148:1
position: 970148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:972061-975413:1:exon

position:972061:1
position: 972061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GMPS
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: GMPS
product: guanine monophosphate synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004060960.1
SIO_010081: GMPS
so part of: GMPS
location: join(946349..946477,951018..951199,954805..954919,956129..956226,957107..957210,957849..958042,958652..958817,960274..960425,960798..960971,961879..961984,962505..962620,963558..963683,965849..965964,967247..967377,969976..970148,972061..975080,975121..975413)
location: region:946349-975413:1
so has part: feature:946349-946477:1:exon
so has part: feature:951018-951199:1:exon
so has part: feature:954805-954919:1:exon
so has part: feature:956129-956226:1:exon
so has part: feature:957107-957210:1:exon
so has part: feature:957849-958042:1:exon
so has part: feature:958652-958817:1:exon
so has part: feature:960274-960425:1:exon
so has part: feature:960798-960971:1:exon
so has part: feature:961879-961984:1:exon
so has part: feature:962505-962620:1:exon
so has part: feature:963558-963683:1:exon
so has part: feature:965849-965964:1:exon
so has part: feature:967247-967377:1:exon
so has part: feature:969976-970148:1:exon
so has part: feature:972061-975080:1:exon
so has part: feature:975121-975413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946349-946477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951018-951199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954805-954919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956129-956226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957107-957210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:957849-958042:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:958652-958817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960274-960425:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960798-960971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:961879-961984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962505-962620:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963558-963683:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:965849-965964:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967247-967377:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:969976-970148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:972061-975080:1:exon

position:975080:1
position: 975080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:975121-975413:1:exon

position:975121:1
position: 975121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GMPS
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: GMPS
product: guanine monophosphate synthase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004060961.1
SIO_010081: GMPS
so part of: GMPS
location: join(946349..946477,951018..951199,954805..954919,956129..956226,957107..957210,957849..958042,958652..958817,960274..960425,960798..960971,961879..961984,962505..962620,963558..963683,965849..965964,967247..967377,969976..970148,972061..973267,973352..975413)
location: region:946349-975413:1
so has part: feature:946349-946477:1:exon
so has part: feature:951018-951199:1:exon
so has part: feature:954805-954919:1:exon
so has part: feature:956129-956226:1:exon
so has part: feature:957107-957210:1:exon
so has part: feature:957849-958042:1:exon
so has part: feature:958652-958817:1:exon
so has part: feature:960274-960425:1:exon
so has part: feature:960798-960971:1:exon
so has part: feature:961879-961984:1:exon
so has part: feature:962505-962620:1:exon
so has part: feature:963558-963683:1:exon
so has part: feature:965849-965964:1:exon
so has part: feature:967247-967377:1:exon
so has part: feature:969976-970148:1:exon
so has part: feature:972061-973267:1:exon
so has part: feature:973352-975413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946349-946477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951018-951199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954805-954919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956129-956226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957107-957210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:957849-958042:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:958652-958817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960274-960425:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960798-960971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:961879-961984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962505-962620:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963558-963683:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:965849-965964:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967247-967377:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:969976-970148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:972061-973267:1:exon

position:973267:1
position: 973267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:973352-975413:1:exon

position:973352:1
position: 973352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GMPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GMPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GMP synthase [glutamine-hydrolyzing]
translation: MALCNGDTKPENAGAEPKDGQHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIREQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSVREDGVFSITLDNTCSLFRGLQKEELVLLTHGDSVDKVADGFKVVAQSGNIIAGIANESKKLYGAQFHPEVSLTVNGKMILKNFLYDIAGCPGTFTVENRELQCIQDIKDKVGSSKVLVLLSGGVDSTVCTALLNRALNREQVIAVHIDNGFMRKRESQAVEEALRKLGIHVKVVNAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAEVIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRVLGRELGLPEELVSRHPFPGPGLAIRVICAEEPYVCKDFPETNNILKIVADFSASVKKPHTLLQRVKACTSEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDAPHWESLMFLARLIPRMCHNINRVVYVFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPIILTPLHFDRDPLQKQPSCQRSVVIRPFITSDFMTGIAATPGSEVPEEVVLKMVAEIKKIPGISRVMYDLTSKPPGTTEWE
SIO_010081: GMPS
subclass of: SO_0000673
so part of: GMPS
location: join(946451..946477,951018..951199,954805..954919,956129..956226,957107..957210,957849..958042,958652..958817,960274..960425,960798..960971,961879..961984,962505..962620,963558..963683,965849..965964,967247..967377,969976..970148,972061..972162)
location: region:946451-972162:1
so has part: feature:946451-946477:1:exon
so has part: feature:951018-951199:1:exon
so has part: feature:954805-954919:1:exon
so has part: feature:956129-956226:1:exon
so has part: feature:957107-957210:1:exon
so has part: feature:957849-958042:1:exon
so has part: feature:958652-958817:1:exon
so has part: feature:960274-960425:1:exon
so has part: feature:960798-960971:1:exon
so has part: feature:961879-961984:1:exon
so has part: feature:962505-962620:1:exon
so has part: feature:963558-963683:1:exon
so has part: feature:965849-965964:1:exon
so has part: feature:967247-967377:1:exon
so has part: feature:969976-970148:1:exon
so has part: feature:972061-972162:1:exon

XP_030810282.1
type: Protein
SIO_000068: ncbiprotein

position:946451:1
position: 946451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972162:1
position: 972162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946451-946477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951018-951199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954805-954919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956129-956226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957107-957210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:957849-958042:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:958652-958817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960274-960425:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960798-960971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:961879-961984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962505-962620:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963558-963683:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:965849-965964:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967247-967377:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:969976-970148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:972061-972162:1:exon

KCNAB1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KCNAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 998196..1040272
location: region:998196-1040272:1
so has part: feature:998196-1040272:1:exon
subclass of: SO_0000010

115906779
type: Gene
SIO_000068: ncbigene

position:998196:1
position: 998196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040272:1
position: 1040272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998196-1040272:1:exon

KCNAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KCNAB1
product: potassium voltage-gated channel subfamily A member regulatory beta subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954245.1
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(998196..998582,1016659..1016702,1024144..1024181,1025575..1025654,1026504..1026548,1027745..1027789,1028353..1028396,1031399..1031485,1034950..1035035,1035780..1035900,1036334..1036428,1037304..1037424,1038238..1038326,1038882..1040272)
location: region:998196-1040272:1
so has part: feature:998196-998582:1:exon
so has part: feature:1016659-1016702:1:exon
so has part: feature:1024144-1024181:1:exon
so has part: feature:1025575-1025654:1:exon
so has part: feature:1026504-1026548:1:exon
so has part: feature:1027745-1027789:1:exon
so has part: feature:1028353-1028396:1:exon
so has part: feature:1031399-1031485:1:exon
so has part: feature:1034950-1035035:1:exon
so has part: feature:1035780-1035900:1:exon
so has part: feature:1036334-1036428:1:exon
so has part: feature:1037304-1037424:1:exon
so has part: feature:1038238-1038326:1:exon
so has part: feature:1038882-1040272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998196-998582:1:exon

position:998582:1
position: 998582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016659-1016702:1:exon

position:1016659:1
position: 1016659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016702:1
position: 1016702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1024144-1024181:1:exon

position:1024144:1
position: 1024144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024181:1
position: 1024181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1025575-1025654:1:exon

position:1025575:1
position: 1025575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025654:1
position: 1025654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1026504-1026548:1:exon

position:1026504:1
position: 1026504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026548:1
position: 1026548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1027745-1027789:1:exon

position:1027745:1
position: 1027745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027789:1
position: 1027789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1028353-1028396:1:exon

position:1028353:1
position: 1028353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028396:1
position: 1028396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1031399-1031485:1:exon

position:1031399:1
position: 1031399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031485:1
position: 1031485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1034950-1035035:1:exon

position:1034950:1
position: 1034950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035035:1
position: 1035035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1035780-1035900:1:exon

position:1035780:1
position: 1035780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035900:1
position: 1035900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1036334-1036428:1:exon

position:1036334:1
position: 1036334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036428:1
position: 1036428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1037304-1037424:1:exon

position:1037304:1
position: 1037304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037424:1
position: 1037424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1038238-1038326:1:exon

position:1038238:1
position: 1038238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038326:1
position: 1038326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1038882-1040272:1:exon

position:1038882:1
position: 1038882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KCNAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-1 isoform X2
translation: MQVSIACTDHNLKRNGEDRLISKQNTTTPNVVNAARAKFRTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKEKIISEEGRKQQGKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQVLPKMTSHIVNEIDNILGNKPYSKKDYRS
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(998365..998582,1016659..1016702,1024144..1024181,1025575..1025654,1026504..1026548,1027745..1027789,1028353..1028396,1031399..1031485,1034950..1035035,1035780..1035900,1036334..1036428,1037304..1037424,1038238..1038326,1038882..1038971)
location: region:998365-1038971:1
so has part: feature:998365-998582:1:exon
so has part: feature:1016659-1016702:1:exon
so has part: feature:1024144-1024181:1:exon
so has part: feature:1025575-1025654:1:exon
so has part: feature:1026504-1026548:1:exon
so has part: feature:1027745-1027789:1:exon
so has part: feature:1028353-1028396:1:exon
so has part: feature:1031399-1031485:1:exon
so has part: feature:1034950-1035035:1:exon
so has part: feature:1035780-1035900:1:exon
so has part: feature:1036334-1036428:1:exon
so has part: feature:1037304-1037424:1:exon
so has part: feature:1038238-1038326:1:exon
so has part: feature:1038882-1038971:1:exon

XP_030810105.1
type: Protein
SIO_000068: ncbiprotein

position:998365:1
position: 998365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038971:1
position: 1038971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998365-998582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016659-1016702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024144-1024181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025575-1025654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026504-1026548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027745-1027789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028353-1028396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1031399-1031485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034950-1035035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035780-1035900:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036334-1036428:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1037304-1037424:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038238-1038326:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038882-1038971:1:exon

KCNAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KCNAB1
product: potassium voltage-gated channel subfamily A member regulatory beta subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954244.1
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(1014674..1014701,1016659..1016702,1024144..1024181,1025575..1025654,1026504..1026548,1027745..1027789,1028353..1028396,1031399..1031485,1034950..1035035,1035780..1035900,1036334..1036428,1037304..1037424,1038238..1038326,1038882..1040272)
location: region:1014674-1040272:1
so has part: feature:1014674-1014701:1:exon
so has part: feature:1016659-1016702:1:exon
so has part: feature:1024144-1024181:1:exon
so has part: feature:1025575-1025654:1:exon
so has part: feature:1026504-1026548:1:exon
so has part: feature:1027745-1027789:1:exon
so has part: feature:1028353-1028396:1:exon
so has part: feature:1031399-1031485:1:exon
so has part: feature:1034950-1035035:1:exon
so has part: feature:1035780-1035900:1:exon
so has part: feature:1036334-1036428:1:exon
so has part: feature:1037304-1037424:1:exon
so has part: feature:1038238-1038326:1:exon
so has part: feature:1038882-1040272:1:exon

position:1014674:1
position: 1014674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014674-1014701:1:exon

position:1014701:1
position: 1014701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016659-1016702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024144-1024181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025575-1025654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026504-1026548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027745-1027789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028353-1028396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1031399-1031485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034950-1035035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035780-1035900:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036334-1036428:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1037304-1037424:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038238-1038326:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038882-1040272:1:exon

KCNAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KCNAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-1 isoform X1
translation: MRYINLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKEKIISEEGRKQQGKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQVLPKMTSHIVNEIDNILGNKPYSKKDYRS
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(1014691..1014701,1016659..1016702,1024144..1024181,1025575..1025654,1026504..1026548,1027745..1027789,1028353..1028396,1031399..1031485,1034950..1035035,1035780..1035900,1036334..1036428,1037304..1037424,1038238..1038326,1038882..1038971)
location: region:1014691-1038971:1
so has part: feature:1014691-1014701:1:exon
so has part: feature:1016659-1016702:1:exon
so has part: feature:1024144-1024181:1:exon
so has part: feature:1025575-1025654:1:exon
so has part: feature:1026504-1026548:1:exon
so has part: feature:1027745-1027789:1:exon
so has part: feature:1028353-1028396:1:exon
so has part: feature:1031399-1031485:1:exon
so has part: feature:1034950-1035035:1:exon
so has part: feature:1035780-1035900:1:exon
so has part: feature:1036334-1036428:1:exon
so has part: feature:1037304-1037424:1:exon
so has part: feature:1038238-1038326:1:exon
so has part: feature:1038882-1038971:1:exon

XP_030810104.1
type: Protein
SIO_000068: ncbiprotein

position:1014691:1
position: 1014691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014691-1014701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016659-1016702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024144-1024181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025575-1025654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026504-1026548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027745-1027789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028353-1028396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1031399-1031485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034950-1035035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035780-1035900:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036334-1036428:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1037304-1037424:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038238-1038326:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038882-1038971:1:exon

SSR3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SSR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1042465..1045646)
location: region:1042465-1045646:-1
so has part: feature:1042465-1045646:-1:exon
subclass of: SO_0000010

115906761
type: Gene
SIO_000068: ncbigene

position:1042465:-1
position: 1042465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045646:-1
position: 1045646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042465-1045646:-1:exon

SSR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SSR3
product: signal sequence receptor subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 mRNAs, 30 ESTs, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954210.1
SIO_010081: SSR3
subclass of: SO_0000673
so part of: SSR3
location: complement(join(1042465..1042859,1043484..1043615,1044114..1044212,1044656..1044782,1045397..1045646))
location: region:1042465-1045646:-1
so has part: feature:1045397-1045646:-1:exon
so has part: feature:1044656-1044782:-1:exon
so has part: feature:1044114-1044212:-1:exon
so has part: feature:1043484-1043615:-1:exon
so has part: feature:1042465-1042859:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1045397-1045646:-1:exon

position:1045397:-1
position: 1045397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1044656-1044782:-1:exon

position:1044656:-1
position: 1044656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044782:-1
position: 1044782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1044114-1044212:-1:exon

position:1044114:-1
position: 1044114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044212:-1
position: 1044212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1043484-1043615:-1:exon

position:1043484:-1
position: 1043484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043615:-1
position: 1043615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1042465-1042859:-1:exon

position:1042859:-1
position: 1042859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SSR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit gamma
translation: MAPKGGPGGRQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLVQSAVLYSVMTLISTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDERILWKKNEVADYEATTFSIFYNNTLFLVLVIIASFFVLKNFNPTVNYILSISASSGLIALLSTGSK
SIO_010081: SSR3
subclass of: SO_0000673
so part of: SSR3
location: complement(join(1042793..1042859,1043484..1043615,1044114..1044212,1044656..1044782,1045397..1045535))
location: region:1042793-1045535:-1
so has part: feature:1045397-1045535:-1:exon
so has part: feature:1044656-1044782:-1:exon
so has part: feature:1044114-1044212:-1:exon
so has part: feature:1043484-1043615:-1:exon
so has part: feature:1042793-1042859:-1:exon

XP_030810070.1
type: Protein
SIO_000068: ncbiprotein

position:1042793:-1
position: 1042793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045535:-1
position: 1045535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045397-1045535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044656-1044782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044114-1044212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043484-1043615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042793-1042859:-1:exon

LOC115907149
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1045702..1050080
location: region:1045702-1050080:1
so has part: feature:1045702-1050080:1:exon
subclass of: SO_0000011

115907149
type: Gene
SIO_000068: ncbigene

position:1045702:1
position: 1045702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050080:1
position: 1050080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045702-1050080:1:exon

LOC115907149
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115907149
product: uncharacterized LOC115907149
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004060976.1
SIO_010081: LOC115907149
subclass of: SO_0000673
so part of: LOC115907149
location: join(1045702..1045950,1046670..1046813,1050014..1050080)
location: region:1045702-1050080:1
so has part: feature:1045702-1045950:1:exon
so has part: feature:1046670-1046813:1:exon
so has part: feature:1050014-1050080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1045702-1045950:1:exon

position:1045950:1
position: 1045950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1046670-1046813:1:exon

position:1046670:1
position: 1046670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046813:1
position: 1046813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1050014-1050080:1:exon

position:1050014:1
position: 1050014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIPARP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TIPARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057587..1071620
location: region:1057587-1071620:1
so has part: feature:1057587-1071620:1:exon
subclass of: SO_0000010

115906821
type: Gene
SIO_000068: ncbigene

position:1057587:1
position: 1057587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071620:1
position: 1071620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057587-1071620:1:exon

TIPARP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TIPARP
product: TCDD inducible poly(ADP-ribose) polymerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954318.1
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1057587..1057613,1057802..1058799,1066871..1067039,1067921..1068135,1070512..1070787,1070945..1071620)
location: region:1057587-1071620:1
so has part: feature:1057587-1057613:1:exon
so has part: feature:1057802-1058799:1:exon
so has part: feature:1066871-1067039:1:exon
so has part: feature:1067921-1068135:1:exon
so has part: feature:1070512-1070787:1:exon
so has part: feature:1070945-1071620:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057587-1057613:1:exon

position:1057613:1
position: 1057613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057802-1058799:1:exon

position:1057802:1
position: 1057802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058799:1
position: 1058799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066871-1067039:1:exon

position:1066871:1
position: 1066871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067039:1
position: 1067039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1067921-1068135:1:exon

position:1067921:1
position: 1067921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068135:1
position: 1068135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070512-1070787:1:exon

position:1070512:1
position: 1070512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070787:1
position: 1070787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070945-1071620:1:exon

position:1070945:1
position: 1070945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIPARP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TIPARP
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1068104..1068106,aa:OTHER)
product: LOW QUALITY PROTEIN: protein mono-ADP-ribosyltransferase TIPARP
translation: MCGERRSVGSWEALGRLKVIWREQSLCPMDTEPQPACVVPQAPCPAMKCSPSEDFSPQVRLPEKIPPVKPCFKKKQQVQKRLDTQTLRALRPIFTSLLGAGALDRVFVPRGQRGGHADLCEPAVKKTLDLGTSCPQTENNVTVLMPAAPDVQGQLPGARPSPGHPEQDVQSGEQGFSPETPGTAADNGNESFQDHPLHPSAGDGAACPLFPDKVLESYTSGLLQENSCPMQYNLTPSNKFSAGIFQDKSEEASLDLVFELLNQLQYHTHQEDGIEICVDFLQGTCVYGSDCPKHHTVLPYHWQVRRTATQRWQSVTNDSQEHLERLYCNPDNDKIKVKYRGQECWVDLNLMKFYESAEFDQMRRLSTASCPSSSSNCYTVWKYFCRDHFGWREYSEPVVRLIEEASCRGLLEVRFITWHNQYILNIKDGFQQNSCFAGSGRCAPPAAPLHAFQNDLQXNLLPSMPFLQTLGGSSAVPSPCPDPAAAHDLSPAAVTSPSFYPETWIGMDPAQDFIQVPVLKEDKSYRTIYNLFHKTVPETKYKILKILRVQNQFLWEKYKRKKEYMSKKMSGLDRIMNERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFARKASYSHNFSKRSPKGVHFMFLAKVLTGRYTVGNHTMRRPPPMEPGSITSDLYDSCVDNYFEPQIFVIFNDDQSYPYFIIQYEEVSSTVSI
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1057593..1057613,1057802..1058799,1066871..1067039,1067921..1068135,1070512..1070787,1070945..1071392)
location: region:1057593-1071392:1
so has part: feature:1057593-1057613:1:exon
so has part: feature:1057802-1058799:1:exon
so has part: feature:1066871-1067039:1:exon
so has part: feature:1067921-1068135:1:exon
so has part: feature:1070512-1070787:1:exon
so has part: feature:1070945-1071392:1:exon

XP_030810178.1
type: Protein
SIO_000068: ncbiprotein

position:1057593:1
position: 1057593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071392:1
position: 1071392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057593-1057613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057802-1058799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066871-1067039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067921-1068135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070512-1070787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070945-1071392:1:exon

LEKR1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LEKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1089067..1123270
location: region:1089067-1123270:1
so has part: feature:1089067-1123270:1:exon
subclass of: SO_0000010

115906908
type: Gene
SIO_000068: ncbigene

position:1089067:1
position: 1089067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123270:1
position: 1123270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089067-1123270:1:exon

LEKR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LEKR1
product: leucine, glutamate and lysine rich 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954451.1
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1089067..1089211,1098217..1098431,1102288..1102407,1102806..1102981,1103684..1103869,1112239..1112320,1113813..1113890,1114122..1114325,1115391..1115472,1118453..1118605,1119559..1119858,1121227..1123270)
location: region:1089067-1123270:1
so has part: feature:1089067-1089211:1:exon
so has part: feature:1098217-1098431:1:exon
so has part: feature:1102288-1102407:1:exon
so has part: feature:1102806-1102981:1:exon
so has part: feature:1103684-1103869:1:exon
so has part: feature:1112239-1112320:1:exon
so has part: feature:1113813-1113890:1:exon
so has part: feature:1114122-1114325:1:exon
so has part: feature:1115391-1115472:1:exon
so has part: feature:1118453-1118605:1:exon
so has part: feature:1119559-1119858:1:exon
so has part: feature:1121227-1123270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089067-1089211:1:exon

position:1089211:1
position: 1089211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1098217-1098431:1:exon

position:1098217:1
position: 1098217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098431:1
position: 1098431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1102288-1102407:1:exon

position:1102288:1
position: 1102288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102407:1
position: 1102407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1102806-1102981:1:exon

position:1102806:1
position: 1102806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102981:1
position: 1102981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1103684-1103869:1:exon

position:1103684:1
position: 1103684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103869:1
position: 1103869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1112239-1112320:1:exon

position:1112239:1
position: 1112239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112320:1
position: 1112320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1113813-1113890:1:exon

position:1113813:1
position: 1113813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113890:1
position: 1113890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1114122-1114325:1:exon

position:1114122:1
position: 1114122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114325:1
position: 1114325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1115391-1115472:1:exon

position:1115391:1
position: 1115391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115472:1
position: 1115472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1118453-1118605:1:exon

position:1118453:1
position: 1118453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118605:1
position: 1118605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1119559-1119858:1:exon

position:1119559:1
position: 1119559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119858:1
position: 1119858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1121227-1123270:1:exon

position:1121227:1
position: 1121227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LEKR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LEKR1
product: leucine, glutamate and lysine rich 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954452.1
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1089067..1089211,1098217..1098431,1102288..1102407,1102806..1102981,1112239..1112320,1113813..1113890,1114122..1114325,1115391..1115472,1118453..1118605,1119559..1119858,1121227..1123270)
location: region:1089067-1123270:1
so has part: feature:1089067-1089211:1:exon
so has part: feature:1098217-1098431:1:exon
so has part: feature:1102288-1102407:1:exon
so has part: feature:1102806-1102981:1:exon
so has part: feature:1112239-1112320:1:exon
so has part: feature:1113813-1113890:1:exon
so has part: feature:1114122-1114325:1:exon
so has part: feature:1115391-1115472:1:exon
so has part: feature:1118453-1118605:1:exon
so has part: feature:1119559-1119858:1:exon
so has part: feature:1121227-1123270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089067-1089211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1098217-1098431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102288-1102407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1102806-1102981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112239-1112320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1113813-1113890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1114122-1114325:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115391-1115472:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1118453-1118605:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1119559-1119858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1121227-1123270:1:exon

LEKR1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: LEKR1
product: leucine, glutamate and lysine rich 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004060962.1
SIO_010081: LEKR1
so part of: LEKR1
location: join(1089067..1089211,1098217..1098431,1102288..1102407,1102806..1102981,1103684..1103869,1113813..1113890,1114122..1114135)
location: region:1089067-1114135:1
so has part: feature:1089067-1089211:1:exon
so has part: feature:1098217-1098431:1:exon
so has part: feature:1102288-1102407:1:exon
so has part: feature:1102806-1102981:1:exon
so has part: feature:1103684-1103869:1:exon
so has part: feature:1113813-1113890:1:exon
so has part: feature:1114122-1114135:1:exon

position:1114135:1
position: 1114135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089067-1089211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1098217-1098431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102288-1102407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1102806-1102981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103684-1103869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1113813-1113890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1114122-1114135:1:exon

LEKR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LEKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-, glutamate- and lysine-rich protein 1 isoform X1
translation: MERRGPVHALPEEIRKMPRDQTVCKYCGVSYLTLHEFKVMEDKVKAMEKEIKVYKGSLEREQRLQAELQALHHDLERCRAESESKTERIKTLTVELKTKQEEMKTVKADLQYFQEEKEAAYKQSQVLRTTLEHHCSTLSKAVSLFPFIRSELDSIKEVISTNMENFAAMKEEIFRQIKAMSKEALTEIPKLNQRLAKSQRENECLQEKVKHLTEVADTVELKTQQLQTSLQQGNELQSRCRELQKETLDLTNQVETAGLQLQKVTAEMDHYKKLLLVKSTELDVCQNELKKIKYENGIAESRLTKELKEKEESLLVCQQVCKHLQDEVAEKERREEDLKRRTGRSESELETLKALLSQTEQEVLMLKQERELLKSRTEQLQETLRQKVQSEDSWRDKLEMDLAKGEARHKEAILKVREEARVELELERQKQQELITKYQREHEELQQKIPGLISSATKSLRMEMEILEKKLQDAQMKVAEKDGDKEKEIQSLKRLISELEFQLTMEKSNNESFLDKLRKEIKHKSDELEKLTQEKTQLIHSLSQVQEENSVLQDTVRRECEERFELTAALGRAREQVLELRRLSGALPGSPRSLPAGDLRLSGALGTARAAAAPARAGTAAAAPDPWSRPREGRPRRASPGAGSPPG
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1089164..1089211,1098217..1098431,1102288..1102407,1102806..1102981,1103684..1103869,1112239..1112320,1113813..1113890,1114122..1114325,1115391..1115472,1118453..1118605,1119559..1119858,1121227..1121526)
location: region:1089164-1121526:1
so has part: feature:1089164-1089211:1:exon
so has part: feature:1098217-1098431:1:exon
so has part: feature:1102288-1102407:1:exon
so has part: feature:1102806-1102981:1:exon
so has part: feature:1103684-1103869:1:exon
so has part: feature:1112239-1112320:1:exon
so has part: feature:1113813-1113890:1:exon
so has part: feature:1114122-1114325:1:exon
so has part: feature:1115391-1115472:1:exon
so has part: feature:1118453-1118605:1:exon
so has part: feature:1119559-1119858:1:exon
so has part: feature:1121227-1121526:1:exon

XP_030810311.1
type: Protein
SIO_000068: ncbiprotein

position:1089164:1
position: 1089164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121526:1
position: 1121526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089164-1089211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1098217-1098431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102288-1102407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1102806-1102981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103684-1103869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1112239-1112320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1113813-1113890:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114122-1114325:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115391-1115472:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1118453-1118605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1119559-1119858:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1121227-1121526:1:exon

LEKR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LEKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-, glutamate- and lysine-rich protein 1 isoform X2
translation: MERRGPVHALPEEIRKMPRDQTVCKYCGVSYLTLHEFKVMEDKVKAMEKEIKVYKGSLEREQRLQAELQALHHDLERCRAESESKTERIKTLTVELKTKQEEMKTVKADLQYFQEEKEAAYKQSQVLRTTLEHHCSTLSKAVSLFPFIRSELDSIKEVISTNMENFAAMKEEIFRQIKAMSKEALTDLTNQVETAGLQLQKVTAEMDHYKKLLLVKSTELDVCQNELKKIKYENGIAESRLTKELKEKEESLLVCQQVCKHLQDEVAEKERREEDLKRRTGRSESELETLKALLSQTEQEVLMLKQERELLKSRTEQLQETLRQKVQSEDSWRDKLEMDLAKGEARHKEAILKVREEARVELELERQKQQELITKYQREHEELQQKIPGLISSATKSLRMEMEILEKKLQDAQMKVAEKDGDKEKEIQSLKRLISELEFQLTMEKSNNESFLDKLRKEIKHKSDELEKLTQEKTQLIHSLSQVQEENSVLQDTVRRECEERFELTAALGRAREQVLELRRLSGALPGSPRSLPAGDLRLSGALGTARAAAAPARAGTAAAAPDPWSRPREGRPRRASPGAGSPPG
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1089164..1089211,1098217..1098431,1102288..1102407,1102806..1102981,1112239..1112320,1113813..1113890,1114122..1114325,1115391..1115472,1118453..1118605,1119559..1119858,1121227..1121526)
location: region:1089164-1121526:1
so has part: feature:1089164-1089211:1:exon
so has part: feature:1098217-1098431:1:exon
so has part: feature:1102288-1102407:1:exon
so has part: feature:1102806-1102981:1:exon
so has part: feature:1112239-1112320:1:exon
so has part: feature:1113813-1113890:1:exon
so has part: feature:1114122-1114325:1:exon
so has part: feature:1115391-1115472:1:exon
so has part: feature:1118453-1118605:1:exon
so has part: feature:1119559-1119858:1:exon
so has part: feature:1121227-1121526:1:exon

XP_030810312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1089164-1089211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1098217-1098431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102288-1102407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1102806-1102981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112239-1112320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1113813-1113890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1114122-1114325:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115391-1115472:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1118453-1118605:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1119559-1119858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1121227-1121526:1:exon

CCNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CCNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1129096..1141451)
location: region:1129096-1141451:-1
so has part: feature:1129096-1141451:-1:exon
subclass of: SO_0000010

115906949
type: Gene
SIO_000068: ncbigene

position:1129096:-1
position: 1129096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141451:-1
position: 1141451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129096-1141451:-1:exon

CCNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCNL1
product: cyclin L1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954538.1
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1129096..1129931,1130737..1130835,1130948..1131059,1132127..1132268,1132517..1132621,1132749..1132848,1134130..1134194,1134612..1134732,1140665..1140774,1140935..1141009,1141201..1141451))
location: region:1129096-1141451:-1
so has part: feature:1141201-1141451:-1:exon
so has part: feature:1140935-1141009:-1:exon
so has part: feature:1140665-1140774:-1:exon
so has part: feature:1134612-1134732:-1:exon
so has part: feature:1134130-1134194:-1:exon
so has part: feature:1132749-1132848:-1:exon
so has part: feature:1132517-1132621:-1:exon
so has part: feature:1132127-1132268:-1:exon
so has part: feature:1130948-1131059:-1:exon
so has part: feature:1130737-1130835:-1:exon
so has part: feature:1129096-1129931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1141201-1141451:-1:exon

position:1141201:-1
position: 1141201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140935-1141009:-1:exon

position:1140935:-1
position: 1140935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141009:-1
position: 1141009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1140665-1140774:-1:exon

position:1140665:-1
position: 1140665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140774:-1
position: 1140774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1134612-1134732:-1:exon

position:1134612:-1
position: 1134612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134732:-1
position: 1134732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1134130-1134194:-1:exon

position:1134130:-1
position: 1134130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134194:-1
position: 1134194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1132749-1132848:-1:exon

position:1132749:-1
position: 1132749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132848:-1
position: 1132848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1132517-1132621:-1:exon

position:1132517:-1
position: 1132517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132621:-1
position: 1132621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1132127-1132268:-1:exon

position:1132127:-1
position: 1132127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132268:-1
position: 1132268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1130948-1131059:-1:exon

position:1130948:-1
position: 1130948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131059:-1
position: 1131059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1130737-1130835:-1:exon

position:1130737:-1
position: 1130737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130835:-1
position: 1130835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1129096-1129931:-1:exon

position:1129931:-1
position: 1129931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCNL1
product: cyclin L1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954536.1
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1129096..1129931,1130948..1131059,1132127..1132268,1132517..1132621,1132749..1132848,1134130..1134194,1134612..1134732,1140665..1140774,1140935..1141009,1141201..1141425))
location: region:1129096-1141425:-1
so has part: feature:1141201-1141425:-1:exon
so has part: feature:1140935-1141009:-1:exon
so has part: feature:1140665-1140774:-1:exon
so has part: feature:1134612-1134732:-1:exon
so has part: feature:1134130-1134194:-1:exon
so has part: feature:1132749-1132848:-1:exon
so has part: feature:1132517-1132621:-1:exon
so has part: feature:1132127-1132268:-1:exon
so has part: feature:1130948-1131059:-1:exon
so has part: feature:1129096-1129931:-1:exon

position:1141425:-1
position: 1141425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141201-1141425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140935-1141009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140665-1140774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134612-1134732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134130-1134194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132749-1132848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1132517-1132621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132127-1132268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130948-1131059:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1129096-1129931:-1:exon

CCNL1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: CCNL1
product: cyclin L1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004060963.1
SIO_010081: CCNL1
so part of: CCNL1
location: complement(join(1129096..1129440,1129479..1129931,1130737..1130835,1130948..1131059,1132127..1132268,1132517..1132621,1132749..1132848,1134130..1134194,1134612..1134732,1140665..1140774,1140935..1141009,1141201..1141425))
location: region:1129096-1141425:-1
so has part: feature:1141201-1141425:-1:exon
so has part: feature:1140935-1141009:-1:exon
so has part: feature:1140665-1140774:-1:exon
so has part: feature:1134612-1134732:-1:exon
so has part: feature:1134130-1134194:-1:exon
so has part: feature:1132749-1132848:-1:exon
so has part: feature:1132517-1132621:-1:exon
so has part: feature:1132127-1132268:-1:exon
so has part: feature:1130948-1131059:-1:exon
so has part: feature:1130737-1130835:-1:exon
so has part: feature:1129479-1129931:-1:exon
so has part: feature:1129096-1129440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1141201-1141425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140935-1141009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140665-1140774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134612-1134732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134130-1134194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132749-1132848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1132517-1132621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132127-1132268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130948-1131059:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130737-1130835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1129479-1129931:-1:exon

position:1129479:-1
position: 1129479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1129096-1129440:-1:exon

position:1129440:-1
position: 1129440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCNL1
product: cyclin L1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954537.1
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1129096..1129931,1130737..1130835,1130948..1131059,1132127..1132268,1132517..1132621,1132749..1132848,1134130..1134194,1134612..1134732,1138780..1138852,1140665..1140774))
location: region:1129096-1140774:-1
so has part: feature:1140665-1140774:-1:exon
so has part: feature:1138780-1138852:-1:exon
so has part: feature:1134612-1134732:-1:exon
so has part: feature:1134130-1134194:-1:exon
so has part: feature:1132749-1132848:-1:exon
so has part: feature:1132517-1132621:-1:exon
so has part: feature:1132127-1132268:-1:exon
so has part: feature:1130948-1131059:-1:exon
so has part: feature:1130737-1130835:-1:exon
so has part: feature:1129096-1129931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140665-1140774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138780-1138852:-1:exon

position:1138780:-1
position: 1138780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138852:-1
position: 1138852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1134612-1134732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134130-1134194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132749-1132848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132517-1132621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1132127-1132268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130948-1131059:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130737-1130835:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1129096-1129931:-1:exon

CCNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CCNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-L1 isoform X1
translation: MQDGLDLQCETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRAKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICLTTLKLYTRKKPNYEFLDKEVEKRKMALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKVEEKSPVSVNTKTIKKEPEERQQTSKSPYNGYNNRRSLSGTYSSRSRSRSRSHSGSPRRHHNHGSPHTKAKHGREELKGSSRHGHKRKKSRSRSQSKSREHSEAAKKHRHERSHHRERRERSRSFERSHKGGKHHGSGRSGHSRHRR
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1129580..1129931,1130948..1131059,1132127..1132268,1132517..1132621,1132749..1132848,1134130..1134194,1134612..1134732,1140665..1140774,1140935..1141009,1141201..1141296))
location: region:1129580-1141296:-1
so has part: feature:1141201-1141296:-1:exon
so has part: feature:1140935-1141009:-1:exon
so has part: feature:1140665-1140774:-1:exon
so has part: feature:1134612-1134732:-1:exon
so has part: feature:1134130-1134194:-1:exon
so has part: feature:1132749-1132848:-1:exon
so has part: feature:1132517-1132621:-1:exon
so has part: feature:1132127-1132268:-1:exon
so has part: feature:1130948-1131059:-1:exon
so has part: feature:1129580-1129931:-1:exon

XP_030810396.1
type: Protein
SIO_000068: ncbiprotein

position:1129580:-1
position: 1129580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141296:-1
position: 1141296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141201-1141296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140935-1141009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140665-1140774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134612-1134732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134130-1134194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132749-1132848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1132517-1132621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132127-1132268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130948-1131059:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1129580-1129931:-1:exon

CCNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CCNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-L1 isoform X3
translation: MQDGLDLQCETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRAKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICLTTLKLYTRKKPNYEFLDKEVEKRKMALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKVEEKSPVSVNTKTIKKEPEERQQTSKSPYNGLRKESKRSRSSRSASRSRSRTKSRSRSHSPRRHYNNRRSLSGTYSSRSRSRSRSHSGSPRRHHNHGSPHTKAKHGREELKGSSRHGHKRKKSRSRSQSKSREHSEAAKKHRHERSHHRERRERSRSFERSHKGGKHHGSGRSGHSRHRR
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1129580..1129931,1130737..1130835,1130948..1131059,1132127..1132268,1132517..1132621,1132749..1132848,1134130..1134194,1134612..1134732,1140665..1140774,1140935..1141009,1141201..1141296))
location: region:1129580-1141296:-1
so has part: feature:1141201-1141296:-1:exon
so has part: feature:1140935-1141009:-1:exon
so has part: feature:1140665-1140774:-1:exon
so has part: feature:1134612-1134732:-1:exon
so has part: feature:1134130-1134194:-1:exon
so has part: feature:1132749-1132848:-1:exon
so has part: feature:1132517-1132621:-1:exon
so has part: feature:1132127-1132268:-1:exon
so has part: feature:1130948-1131059:-1:exon
so has part: feature:1130737-1130835:-1:exon
so has part: feature:1129580-1129931:-1:exon

XP_030810398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1141201-1141296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140935-1141009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140665-1140774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134612-1134732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134130-1134194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132749-1132848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1132517-1132621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132127-1132268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130948-1131059:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130737-1130835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1129580-1129931:-1:exon

CCNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CCNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-L1 isoform X2
translation: MKLSSWQQTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICLTTLKLYTRKKPNYEFLDKEVEKRKMALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKVEEKSPVSVNTKTIKKEPEERQQTSKSPYNGLRKESKRSRSSRSASRSRSRTKSRSRSHSPRRHYNNRRSLSGTYSSRSRSRSRSHSGSPRRHHNHGSPHTKAKHGREELKGSSRHGHKRKKSRSRSQSKSREHSEAAKKHRHERSHHRERRERSRSFERSHKGGKHHGSGRSGHSRHRR
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1129580..1129931,1130737..1130835,1130948..1131059,1132127..1132268,1132517..1132621,1132749..1132848,1134130..1134194,1134612..1134732,1138780..1138802))
location: region:1129580-1138802:-1
so has part: feature:1138780-1138802:-1:exon
so has part: feature:1134612-1134732:-1:exon
so has part: feature:1134130-1134194:-1:exon
so has part: feature:1132749-1132848:-1:exon
so has part: feature:1132517-1132621:-1:exon
so has part: feature:1132127-1132268:-1:exon
so has part: feature:1130948-1131059:-1:exon
so has part: feature:1130737-1130835:-1:exon
so has part: feature:1129580-1129931:-1:exon

XP_030810397.1
type: Protein
SIO_000068: ncbiprotein

position:1138802:-1
position: 1138802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138780-1138802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1134612-1134732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1134130-1134194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132749-1132848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132517-1132621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132127-1132268:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130948-1131059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130737-1130835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129580-1129931:-1:exon

VEPH1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: VEPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1157044..1216727)
location: region:1157044-1216727:-1
so has part: feature:1157044-1216727:-1:exon
subclass of: SO_0000010

115907009
type: Gene
SIO_000068: ncbigene

position:1157044:-1
position: 1157044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216727:-1
position: 1216727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157044-1216727:-1:exon

VEPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VEPH1
product: ventricular zone expressed PH domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954630.1
SIO_010081: VEPH1
subclass of: SO_0000673
so part of: VEPH1
location: complement(join(1157044..1157325,1157974..1158110,1163497..1163614,1166725..1166859,1168991..1169130,1176991..1177385,1178332..1178541,1183611..1183828,1187537..1187746,1189177..1189343,1203356..1203530,1205764..1205979,1206701..1206974,1210649..1210709,1216661..1216727))
location: region:1157044-1216727:-1
so has part: feature:1216661-1216727:-1:exon
so has part: feature:1210649-1210709:-1:exon
so has part: feature:1206701-1206974:-1:exon
so has part: feature:1205764-1205979:-1:exon
so has part: feature:1203356-1203530:-1:exon
so has part: feature:1189177-1189343:-1:exon
so has part: feature:1187537-1187746:-1:exon
so has part: feature:1183611-1183828:-1:exon
so has part: feature:1178332-1178541:-1:exon
so has part: feature:1176991-1177385:-1:exon
so has part: feature:1168991-1169130:-1:exon
so has part: feature:1166725-1166859:-1:exon
so has part: feature:1163497-1163614:-1:exon
so has part: feature:1157974-1158110:-1:exon
so has part: feature:1157044-1157325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1216661-1216727:-1:exon

position:1216661:-1
position: 1216661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210649-1210709:-1:exon

position:1210649:-1
position: 1210649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210709:-1
position: 1210709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206701-1206974:-1:exon

position:1206701:-1
position: 1206701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206974:-1
position: 1206974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1205764-1205979:-1:exon

position:1205764:-1
position: 1205764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205979:-1
position: 1205979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1203356-1203530:-1:exon

position:1203356:-1
position: 1203356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203530:-1
position: 1203530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1189177-1189343:-1:exon

position:1189177:-1
position: 1189177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189343:-1
position: 1189343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1187537-1187746:-1:exon

position:1187537:-1
position: 1187537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187746:-1
position: 1187746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1183611-1183828:-1:exon

position:1183611:-1
position: 1183611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183828:-1
position: 1183828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1178332-1178541:-1:exon

position:1178332:-1
position: 1178332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178541:-1
position: 1178541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1176991-1177385:-1:exon

position:1176991:-1
position: 1176991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177385:-1
position: 1177385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1168991-1169130:-1:exon

position:1168991:-1
position: 1168991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169130:-1
position: 1169130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1166725-1166859:-1:exon

position:1166725:-1
position: 1166725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166859:-1
position: 1166859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1163497-1163614:-1:exon

position:1163497:-1
position: 1163497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163614:-1
position: 1163614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1157974-1158110:-1:exon

position:1157974:-1
position: 1157974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158110:-1
position: 1158110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1157044-1157325:-1:exon

position:1157325:-1
position: 1157325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VEPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VEPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ventricular zone-expressed PH domain-containing protein homolog 1
translation: MHHLFGLVLAQKDLSRAGDLFSLEDAEIEGSLSEALEQIRIISSAADYQTNDNDQAVVEICITRITTAIRETASIERHGRALVALWESCLEHNLTPSGKDEDAPHAKIASDIMSCILQNYNRPPVMALAVPVAVKFLQRGNKELCRNMSSYLSLAAIAKAELLAEHTETIVRSVLQGNWMLLRVLPALYEKEPRPIRARLPELVAPMAQLDPPEQLHLLRLLHTVARKRELGVLRECLLFLFAHLRDPNHSEVILNILLEISSYEPAALAPFLPMLRETGESFPNLIGQTAKIFGAVGHLDEERARASLLYLVSQLANMEHSFHHLLLLEIKSLTDSFPSILGCQSRDIYRMSNSFSAIARLLARQLGTDGAAARMEKDPEAECPVPLDDLKSVVNSSEEDEKLQVKIQAFEEKINVDNSTPGSVRRYSLGQVSKEERKDMRFNRSKSLALHTLRVKGLSSEGGTDEDGGDIPAGISFSELCLSQEHQQEPFGLQPEAEHLGSCLLSHQSADHPQAGSLPEVSPEQALEGRAEAATGPVEQQDELHLHLKENLGKVKEFVMEMGRRIPIPEQCVIEDTVQGCVAKLFFSCPLKGHYCLYSKSSFTLVSQQPPLWIHIMFLFQQSLFAEPLSIQSSSVQVLKALWEKTQLKGTHSFETAMIQNTFPHQKDLESVQMHLQEVRFLDLFGYSEEAGAWQCFMCNNPEKAAGVNQDGQPLMEGKLKEKQVRWKFIKSWKTRYFTLAGNQLLFRRGKSKDDPDECPIELSKVQSVKVLPKKRRDRSLPRAFEIFTDSRSYVLKAKDEKNAEQWLQCLNVAVAQARHATRGQATSATVARPPPTCDPGATYL
SIO_010081: VEPH1
subclass of: SO_0000673
so part of: VEPH1
location: complement(join(1157044..1157325,1157974..1158110,1163497..1163614,1166725..1166859,1168991..1169130,1176991..1177385,1178332..1178541,1183611..1183828,1187537..1187746,1189177..1189343,1203356..1203530,1205764..1205979,1206701..1206838))
location: region:1157044-1206838:-1
so has part: feature:1206701-1206838:-1:exon
so has part: feature:1205764-1205979:-1:exon
so has part: feature:1203356-1203530:-1:exon
so has part: feature:1189177-1189343:-1:exon
so has part: feature:1187537-1187746:-1:exon
so has part: feature:1183611-1183828:-1:exon
so has part: feature:1178332-1178541:-1:exon
so has part: feature:1176991-1177385:-1:exon
so has part: feature:1168991-1169130:-1:exon
so has part: feature:1166725-1166859:-1:exon
so has part: feature:1163497-1163614:-1:exon
so has part: feature:1157974-1158110:-1:exon
so has part: feature:1157044-1157325:-1:exon

XP_030810490.1
type: Protein
SIO_000068: ncbiprotein

position:1206838:-1
position: 1206838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206701-1206838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205764-1205979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1203356-1203530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189177-1189343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1187537-1187746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183611-1183828:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1178332-1178541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1176991-1177385:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1168991-1169130:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1166725-1166859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163497-1163614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1157974-1158110:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1157044-1157325:-1:exon

PTX3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PTX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1194508..1200324
location: region:1194508-1200324:1
so has part: feature:1194508-1200324:1:exon
subclass of: SO_0000010

115907127
type: Gene
SIO_000068: ncbigene

position:1194508:1
position: 1194508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200324:1
position: 1200324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194508-1200324:1:exon

PTX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PTX3
product: pentraxin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954812.1
SIO_010081: PTX3
subclass of: SO_0000673
so part of: PTX3
location: join(1194508..1194753,1195230..1195751,1198922..1200324)
location: region:1194508-1200324:1
so has part: feature:1194508-1194753:1:exon
so has part: feature:1195230-1195751:1:exon
so has part: feature:1198922-1200324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194508-1194753:1:exon

position:1194753:1
position: 1194753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1195230-1195751:1:exon

position:1195230:1
position: 1195230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195751:1
position: 1195751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1198922-1200324:1:exon

position:1198922:1
position: 1198922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PTX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentraxin-related protein PTX3
translation: MLPRELLSLLTLLCAFRVSGSVVDEDDDYELMYVNLDNEIEGPAPATEEAASCDCQREHSKWDKLFIMLENSQMKENMMLQALDELPRLELQTLKAELSQLATTLAGTVATVTSHVVSQVEQVLLRSREQAEQARRLQESEQGKVLEHVLQLSHNVSARLGWLESAWHRRAEEQAQQTALQQDKQHGSRGDSPILSSLWKELQQTRAELRASQQWAAQHLLPAGCETAILFPMRSRKIFGSVHPTSGMALSSFTACIWLKVTEALDKTIVFSYGTRFNPYEIQLYLSRASAVLAVGSAQHKLAATNVVVPGKWLHLCGSWSSENGSASLWAQGELAASAWHVAGAHTIPDGGILQLGQEKNGCCVGGGFDEALAFSGKLTGFNLWDRVLSPAEVTAQSTGDTCGTRGNVVGWGVTEVLPHGGAQYVS
SIO_010081: PTX3
subclass of: SO_0000673
so part of: PTX3
location: join(1194606..1194753,1195230..1195751,1198922..1199535)
location: region:1194606-1199535:1
so has part: feature:1194606-1194753:1:exon
so has part: feature:1195230-1195751:1:exon
so has part: feature:1198922-1199535:1:exon

XP_030810672.1
type: Protein
SIO_000068: ncbiprotein

position:1194606:1
position: 1194606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199535:1
position: 1199535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194606-1194753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195230-1195751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198922-1199535:1:exon

LOC115907010
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1220769..1234918
location: region:1220769-1234918:1
so has part: feature:1220769-1234918:1:exon
subclass of: SO_0000010

115907010
type: Gene
SIO_000068: ncbigene

position:1220769:1
position: 1220769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234918:1
position: 1234918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220769-1234918:1:exon

LOC115907010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907010
product: lysosomal amino acid transporter 1 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_030954631.1
SIO_010081: LOC115907010
subclass of: SO_0000673
so part of: LOC115907010
location: join(1220769..1220798,1223459..1223673,1224792..1224886,1226131..1226173,1227102..1227194,1228096..1228281,1234820..1234918)
location: region:1220769-1234918:1
so has part: feature:1220769-1220798:1:exon
so has part: feature:1223459-1223673:1:exon
so has part: feature:1224792-1224886:1:exon
so has part: feature:1226131-1226173:1:exon
so has part: feature:1227102-1227194:1:exon
so has part: feature:1228096-1228281:1:exon
so has part: feature:1234820-1234918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1220769-1220798:1:exon

position:1220798:1
position: 1220798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1223459-1223673:1:exon

position:1223459:1
position: 1223459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223673:1
position: 1223673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1224792-1224886:1:exon

position:1224792:1
position: 1224792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224886:1
position: 1224886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1226131-1226173:1:exon

position:1226131:1
position: 1226131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226173:1
position: 1226173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1227102-1227194:1:exon

position:1227102:1
position: 1227102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227194:1
position: 1227194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1228096-1228281:1:exon

position:1228096:1
position: 1228096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228281:1
position: 1228281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1234820-1234918:1:exon

position:1234820:1
position: 1234820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115907010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907010
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1228240..1228242,aa:OTHER)
product: LOW QUALITY PROTEIN: lysosomal amino acid transporter 1 homolog
translation: MAAGRAGAASPGFAQRMFSVPNRIWGFARAANGGRKQLLGLELRAGVMAAQXALSASPAESRRLSRKGAPWIWHLLQECARDIVTAAFYENKDLIMISQFVYCKLKNQKVSKDKQSQPEEFGHSLDCGSSPDLTEMPAFICGSGSCVVLGSRFLQLCKNLQRRCTESAFYLLFALAMMGNCTCGLSLALKMPNPKSSWAFYFVHPLPXLIGSFGVLFLDILMWPKVTLRKLNMQSCPEQSLSSEQDVLDMSQP
SIO_010081: LOC115907010
subclass of: SO_0000673
so part of: LOC115907010
location: join(1220769..1220798,1223459..1223673,1224792..1224886,1226131..1226173,1227102..1227194,1228096..1228281,1234820..1234918)
location: region:1220769-1234918:1
so has part: feature:1220769-1220798:1:exon
so has part: feature:1223459-1223673:1:exon
so has part: feature:1224792-1224886:1:exon
so has part: feature:1226131-1226173:1:exon
so has part: feature:1227102-1227194:1:exon
so has part: feature:1228096-1228281:1:exon
so has part: feature:1234820-1234918:1:exon

XP_030810491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1220769-1220798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1223459-1223673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224792-1224886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1226131-1226173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1227102-1227194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1228096-1228281:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1234820-1234918:1:exon

SHOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SHOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1312034..1316980)
location: region:1312034-1316980:-1
so has part: feature:1312034-1316980:-1:exon
subclass of: SO_0000010

115907141
type: Gene
SIO_000068: ncbigene

position:1312034:-1
position: 1312034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316980:-1
position: 1316980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312034-1316980:-1:exon

SHOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SHOX2
product: short stature homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954829.1
SIO_010081: SHOX2
subclass of: SO_0000673
so part of: SHOX2
location: complement(join(1312034..1312490,1312572..1312660,1312746..1312803,1315111..1315319,1316342..1316980))
location: region:1312034-1316980:-1
so has part: feature:1316342-1316980:-1:exon
so has part: feature:1315111-1315319:-1:exon
so has part: feature:1312746-1312803:-1:exon
so has part: feature:1312572-1312660:-1:exon
so has part: feature:1312034-1312490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1316342-1316980:-1:exon

position:1316342:-1
position: 1316342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1315111-1315319:-1:exon

position:1315111:-1
position: 1315111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315319:-1
position: 1315319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1312746-1312803:-1:exon

position:1312746:-1
position: 1312746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312803:-1
position: 1312803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1312572-1312660:-1:exon

position:1312572:-1
position: 1312572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312660:-1
position: 1312660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1312034-1312490:-1:exon

position:1312490:-1
position: 1312490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SHOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short stature homeobox protein 2
translation: MEELTAFVSKSFDPKAKEKKELITYREVLESGPLRGGGGGPREPGGAAAEPGRGGHGQPAARPAGRSPPREPDAAAERAAEAATPKLSDVSPELKERKEDAKAMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAATQFEACRVAPYVNVGALRMPFQQVQAQLQLDSAVAHAHHHLHPHLAHAPYMMFPAPPFGLPLATLAESASAASVVAAAAAAKTTSKNSSIADLRLKAKKHAAALGL
SIO_010081: SHOX2
subclass of: SO_0000673
so part of: SHOX2
location: complement(join(1312239..1312490,1312572..1312660,1312746..1312803,1315111..1315319,1316342..1316609))
location: region:1312239-1316609:-1
so has part: feature:1316342-1316609:-1:exon
so has part: feature:1315111-1315319:-1:exon
so has part: feature:1312746-1312803:-1:exon
so has part: feature:1312572-1312660:-1:exon
so has part: feature:1312239-1312490:-1:exon

XP_030810689.1
type: Protein
SIO_000068: ncbiprotein

position:1312239:-1
position: 1312239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316609:-1
position: 1316609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316342-1316609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1315111-1315319:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1312746-1312803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1312572-1312660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312239-1312490:-1:exon

LOC115906714
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115906714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1318368..1322107
location: region:1318368-1322107:1
so has part: feature:1318368-1322107:1:exon
subclass of: SO_0000011

115906714
type: Gene
SIO_000068: ncbigene

position:1318368:1
position: 1318368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322107:1
position: 1322107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318368-1322107:1:exon

LOC115906714
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115906714
product: uncharacterized LOC115906714
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004060952.1
SIO_010081: LOC115906714
subclass of: SO_0000673
so part of: LOC115906714
location: join(1318368..1318434,1318925..1318967,1319357..1319550,1321967..1322107)
location: region:1318368-1322107:1
so has part: feature:1318368-1318434:1:exon
so has part: feature:1318925-1318967:1:exon
so has part: feature:1319357-1319550:1:exon
so has part: feature:1321967-1322107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1318368-1318434:1:exon

position:1318434:1
position: 1318434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1318925-1318967:1:exon

position:1318925:1
position: 1318925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318967:1
position: 1318967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1319357-1319550:1:exon

position:1319357:1
position: 1319357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319550:1
position: 1319550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1321967-1322107:1:exon

position:1321967:1
position: 1321967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSRC1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1342737..1415915
location: region:1342737-1415915:1
so has part: feature:1342737-1415915:1:exon
subclass of: SO_0000010

115907011
type: Gene
SIO_000068: ncbigene

position:1342737:1
position: 1342737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415915:1
position: 1415915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342737-1415915:1:exon

RSRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RSRC1
product: arginine and serine rich coiled-coil 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954632.1
SIO_010081: RSRC1
subclass of: SO_0000673
so part of: RSRC1
location: join(1342737..1342799,1342990..1343100,1343153..1343268,1364696..1364732,1376457..1376508,1399439..1399507,1412321..1412427,1413257..1413403,1414142..1415915)
location: region:1342737-1415915:1
so has part: feature:1342737-1342799:1:exon
so has part: feature:1342990-1343100:1:exon
so has part: feature:1343153-1343268:1:exon
so has part: feature:1364696-1364732:1:exon
so has part: feature:1376457-1376508:1:exon
so has part: feature:1399439-1399507:1:exon
so has part: feature:1412321-1412427:1:exon
so has part: feature:1413257-1413403:1:exon
so has part: feature:1414142-1415915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342737-1342799:1:exon

position:1342799:1
position: 1342799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1342990-1343100:1:exon

position:1342990:1
position: 1342990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343100:1
position: 1343100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1343153-1343268:1:exon

position:1343153:1
position: 1343153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343268:1
position: 1343268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1364696-1364732:1:exon

position:1364696:1
position: 1364696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364732:1
position: 1364732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1376457-1376508:1:exon

position:1376457:1
position: 1376457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376508:1
position: 1376508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1399439-1399507:1:exon

position:1399439:1
position: 1399439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399507:1
position: 1399507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1412321-1412427:1:exon

position:1412321:1
position: 1412321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412427:1
position: 1412427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1413257-1413403:1:exon

position:1413257:1
position: 1413257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413403:1
position: 1413403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1414142-1415915:1:exon

position:1414142:1
position: 1414142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/Arginine-related protein 53
translation: MSLFYQDPSAPGVSVVVQVMDVAVVGSAALLQPQQREVRPQENPQCVPVFLQIIVICEGASAGPTASSRGRPRDKDKDKAKDKGKGKEKEIHGTKAGDSANIKAGLEHLTPAEQAKARLQLVLEAAAKADEALKAKERSEEEAKRRKEEDQATLLDQVKRVKEIEAIESDAFVPQTFRSSKEVKKSAEPPELHQEPVNVGAGATEAAAAEKEPPAANMPTAIKYQDDNSLAHPNLFMEKAEAEEKWFQRLVALRQERLMGSPVA
SIO_010081: RSRC1
subclass of: SO_0000673
so part of: RSRC1
location: join(1342737..1342799,1342990..1343100,1343153..1343268,1364696..1364732,1376457..1376508,1399439..1399507,1412321..1412427,1413257..1413403,1414142..1414234)
location: region:1342737-1414234:1
so has part: feature:1342737-1342799:1:exon
so has part: feature:1342990-1343100:1:exon
so has part: feature:1343153-1343268:1:exon
so has part: feature:1364696-1364732:1:exon
so has part: feature:1376457-1376508:1:exon
so has part: feature:1399439-1399507:1:exon
so has part: feature:1412321-1412427:1:exon
so has part: feature:1413257-1413403:1:exon
so has part: feature:1414142-1414234:1:exon

XP_030810492.1
type: Protein
SIO_000068: ncbiprotein

position:1414234:1
position: 1414234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342737-1342799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1342990-1343100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1343153-1343268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364696-1364732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1376457-1376508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399439-1399507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412321-1412427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1413257-1413403:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414142-1414234:1:exon

MLF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1423795..1436285
location: region:1423795-1436285:1
so has part: feature:1423795-1436285:1:exon
subclass of: SO_0000010

115906708
type: Gene
SIO_000068: ncbigene

position:1423795:1
position: 1423795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436285:1
position: 1436285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423795-1436285:1:exon

MLF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MLF1
product: myeloid leukemia factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954092.1
SIO_010081: MLF1
subclass of: SO_0000673
so part of: MLF1
location: join(1423795..1423910,1428338..1428512,1430925..1430969,1431796..1431885,1432194..1432322,1433778..1433937,1434201..1434333,1434482..1436285)
location: region:1423795-1436285:1
so has part: feature:1423795-1423910:1:exon
so has part: feature:1428338-1428512:1:exon
so has part: feature:1430925-1430969:1:exon
so has part: feature:1431796-1431885:1:exon
so has part: feature:1432194-1432322:1:exon
so has part: feature:1433778-1433937:1:exon
so has part: feature:1434201-1434333:1:exon
so has part: feature:1434482-1436285:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1423795-1423910:1:exon

position:1423910:1
position: 1423910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1428338-1428512:1:exon

position:1428338:1
position: 1428338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428512:1
position: 1428512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1430925-1430969:1:exon

position:1430925:1
position: 1430925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430969:1
position: 1430969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1431796-1431885:1:exon

position:1431796:1
position: 1431796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431885:1
position: 1431885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1432194-1432322:1:exon

position:1432194:1
position: 1432194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432322:1
position: 1432322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1433778-1433937:1:exon

position:1433778:1
position: 1433778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433937:1
position: 1433937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1434201-1434333:1:exon

position:1434201:1
position: 1434201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434333:1
position: 1434333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1434482-1436285:1:exon

position:1434482:1
position: 1434482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MLF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MLF1
product: myeloid leukemia factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954093.1
SIO_010081: MLF1
subclass of: SO_0000673
so part of: MLF1
location: join(1423795..1423910,1428338..1428512,1431796..1431885,1432194..1432322,1433778..1433937,1434201..1434333,1434482..1436285)
location: region:1423795-1436285:1
so has part: feature:1423795-1423910:1:exon
so has part: feature:1428338-1428512:1:exon
so has part: feature:1431796-1431885:1:exon
so has part: feature:1432194-1432322:1:exon
so has part: feature:1433778-1433937:1:exon
so has part: feature:1434201-1434333:1:exon
so has part: feature:1434482-1436285:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1423795-1423910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428338-1428512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1431796-1431885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1432194-1432322:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1433778-1433937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434201-1434333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434482-1436285:1:exon

MLF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X1
translation: MFGGLGRCFEDDPFFRDPFAAHHEHMRQVMRNFSEPFGRDPLLSLPEGGERPAERRAGGRAQQDLQVATRGPRRATSFSLMPFAGFGRGWDADFMDPFSAMDRMMSNMRNNMLEMHRKFDDLSIQPEGHSFSSSSMMTYSRVGDEPPKVFQATTQTRTAPGGVKETRKALKDSESGLEKISVGHHIQDRAHVIRRSKNSKTGDEEMNQEFINLDESEAGTFDEEWQREIMKFRPCRSRAAVEASRSRSAHYSPREGGSRREKPLGAPGSRVPRDSLEALSVKGTPVPLKGSRN
SIO_010081: MLF1
subclass of: SO_0000673
so part of: MLF1
location: join(1423864..1423910,1428338..1428512,1430925..1430969,1431796..1431885,1432194..1432322,1433778..1433937,1434201..1434333,1434482..1434584)
location: region:1423864-1434584:1
so has part: feature:1423864-1423910:1:exon
so has part: feature:1428338-1428512:1:exon
so has part: feature:1430925-1430969:1:exon
so has part: feature:1431796-1431885:1:exon
so has part: feature:1432194-1432322:1:exon
so has part: feature:1433778-1433937:1:exon
so has part: feature:1434201-1434333:1:exon
so has part: feature:1434482-1434584:1:exon

XP_030809952.1
type: Protein
SIO_000068: ncbiprotein

position:1423864:1
position: 1423864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434584:1
position: 1434584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423864-1423910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428338-1428512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1430925-1430969:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1431796-1431885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432194-1432322:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1433778-1433937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434201-1434333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1434482-1434584:1:exon

MLF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X2
translation: MFGGLGRCFEDDPFFRDPFAAHHEHMRQVMRNFSEPFGRDPLLSLPEGGERPAERRAGGRAQQDLQVATRGPRRWDADFMDPFSAMDRMMSNMRNNMLEMHRKFDDLSIQPEGHSFSSSSMMTYSRVGDEPPKVFQATTQTRTAPGGVKETRKALKDSESGLEKISVGHHIQDRAHVIRRSKNSKTGDEEMNQEFINLDESEAGTFDEEWQREIMKFRPCRSRAAVEASRSRSAHYSPREGGSRREKPLGAPGSRVPRDSLEALSVKGTPVPLKGSRN
SIO_010081: MLF1
subclass of: SO_0000673
so part of: MLF1
location: join(1423864..1423910,1428338..1428512,1431796..1431885,1432194..1432322,1433778..1433937,1434201..1434333,1434482..1434584)
location: region:1423864-1434584:1
so has part: feature:1423864-1423910:1:exon
so has part: feature:1428338-1428512:1:exon
so has part: feature:1431796-1431885:1:exon
so has part: feature:1432194-1432322:1:exon
so has part: feature:1433778-1433937:1:exon
so has part: feature:1434201-1434333:1:exon
so has part: feature:1434482-1434584:1:exon

XP_030809953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1423864-1423910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428338-1428512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1431796-1431885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1432194-1432322:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1433778-1433937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434201-1434333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434482-1434584:1:exon

GFM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GFM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1437096..1453792
location: region:1437096-1453792:1
so has part: feature:1437096-1453792:1:exon
subclass of: SO_0000010

115906698
type: Gene
SIO_000068: ncbigene

position:1437096:1
position: 1437096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453792:1
position: 1453792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437096-1453792:1:exon

GFM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GFM1
product: G elongation factor mitochondrial 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954077.1
SIO_010081: GFM1
subclass of: SO_0000673
so part of: GFM1
location: join(1437096..1437253,1437868..1438020,1438321..1438453,1438887..1439091,1439770..1439886,1440382..1440532,1440813..1440967,1441755..1441839,1442923..1443060,1443532..1443633,1443723..1443779,1444101..1444238,1444926..1445008,1450521..1450684,1451463..1451607,1452396..1452556,1453062..1453115,1453378..1453792)
location: region:1437096-1453792:1
so has part: feature:1437096-1437253:1:exon
so has part: feature:1437868-1438020:1:exon
so has part: feature:1438321-1438453:1:exon
so has part: feature:1438887-1439091:1:exon
so has part: feature:1439770-1439886:1:exon
so has part: feature:1440382-1440532:1:exon
so has part: feature:1440813-1440967:1:exon
so has part: feature:1441755-1441839:1:exon
so has part: feature:1442923-1443060:1:exon
so has part: feature:1443532-1443633:1:exon
so has part: feature:1443723-1443779:1:exon
so has part: feature:1444101-1444238:1:exon
so has part: feature:1444926-1445008:1:exon
so has part: feature:1450521-1450684:1:exon
so has part: feature:1451463-1451607:1:exon
so has part: feature:1452396-1452556:1:exon
so has part: feature:1453062-1453115:1:exon
so has part: feature:1453378-1453792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1437096-1437253:1:exon

position:1437253:1
position: 1437253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1437868-1438020:1:exon

position:1437868:1
position: 1437868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438020:1
position: 1438020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1438321-1438453:1:exon

position:1438321:1
position: 1438321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438453:1
position: 1438453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438887-1439091:1:exon

position:1438887:1
position: 1438887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439091:1
position: 1439091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1439770-1439886:1:exon

position:1439770:1
position: 1439770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439886:1
position: 1439886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1440382-1440532:1:exon

position:1440382:1
position: 1440382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440532:1
position: 1440532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1440813-1440967:1:exon

position:1440813:1
position: 1440813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440967:1
position: 1440967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1441755-1441839:1:exon

position:1441755:1
position: 1441755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441839:1
position: 1441839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1442923-1443060:1:exon

position:1442923:1
position: 1442923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443060:1
position: 1443060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1443532-1443633:1:exon

position:1443532:1
position: 1443532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443633:1
position: 1443633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1443723-1443779:1:exon

position:1443723:1
position: 1443723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443779:1
position: 1443779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1444101-1444238:1:exon

position:1444101:1
position: 1444101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444238:1
position: 1444238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1444926-1445008:1:exon

position:1444926:1
position: 1444926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445008:1
position: 1445008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1450521-1450684:1:exon

position:1450521:1
position: 1450521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450684:1
position: 1450684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1451463-1451607:1:exon

position:1451463:1
position: 1451463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451607:1
position: 1451607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1452396-1452556:1:exon

position:1452396:1
position: 1452396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452556:1
position: 1452556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1453062-1453115:1:exon

position:1453062:1
position: 1453062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453115:1
position: 1453115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1453378-1453792:1:exon

position:1453378:1
position: 1453378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GFM1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: elongation factor G, mitochondrial
translation: MLRVLRAGLAPGRPQHIQLLLTSCRHCSSGVLPNERIRNIGISAHIDSGKTTLTERILFYTGRIAQMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDTNINIIDTPGHVDFTIEVERSLRVLDGAILVLCAVGGVQCQTITVNRQMKRYNVPFLTFINKLDRMGSNPARAVQQLRSKLKHNAAFVQIPIGLEGNFKGIIDLIEEKAIYFDGALGQTLRVEEIPAELRAEAAERRRELIECVANADELLGELFLEEKIPTAAQLKLAIRRATLQKSFTPVLVGSALKNKGVQPLLDAVLEYLPNPSEVENYALLNQGDSQDQTKFLLNSARDDSQPFIGLAFKLEAGKFGQLTYVRVYQGMLKKSDYIYNTRTGKRVRVQRLVRMHSDNMEDVNEVYAGDICALFGIDCASGDTFTDKTSTDISMESIHVPDPVISVAMKPSNKNDLDKFSKGLGRFTREDPTFRIHFDEESKETIVSGMGELHLEIYAQRMEREYGCPCTMGKPKVSFRENISAPVPFEFTHKKQSGGAGQYGKVIGVLEPLEPEDFTKLEFEDRTIGTNIPKQFVPAVEKGFRDACEKGLLSGHRISGVRFVLEDGAHHMVDSNEISFIRAGEGALKQAMENAAVRILEPIMAVEVVAPVEFQGAVIAGINRRHGVITGQDGSEGYFTLYAEVPLNDMFGYATELRSCTEGKGEYTMEYSKYHPCSASTQEEIINKYLEATGRLPAKKGKAKS
SIO_010081: GFM1
subclass of: SO_0000673
so part of: GFM1
location: join(1437200..1437253,1437868..1438020,1438321..1438453,1438887..1439091,1439770..1439886,1440382..1440532,1440813..1440967,1441755..1441839,1442923..1443060,1443532..1443633,1443723..1443779,1444101..1444238,1444926..1445008,1450521..1450684,1451463..1451607,1452396..1452556,1453062..1453115,1453378..1453509)
location: region:1437200-1453509:1
so has part: feature:1437200-1437253:1:exon
so has part: feature:1437868-1438020:1:exon
so has part: feature:1438321-1438453:1:exon
so has part: feature:1438887-1439091:1:exon
so has part: feature:1439770-1439886:1:exon
so has part: feature:1440382-1440532:1:exon
so has part: feature:1440813-1440967:1:exon
so has part: feature:1441755-1441839:1:exon
so has part: feature:1442923-1443060:1:exon
so has part: feature:1443532-1443633:1:exon
so has part: feature:1443723-1443779:1:exon
so has part: feature:1444101-1444238:1:exon
so has part: feature:1444926-1445008:1:exon
so has part: feature:1450521-1450684:1:exon
so has part: feature:1451463-1451607:1:exon
so has part: feature:1452396-1452556:1:exon
so has part: feature:1453062-1453115:1:exon
so has part: feature:1453378-1453509:1:exon

XP_030809937.1
type: Protein
SIO_000068: ncbiprotein

position:1437200:1
position: 1437200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453509:1
position: 1453509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437200-1437253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437868-1438020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438321-1438453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438887-1439091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439770-1439886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440382-1440532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440813-1440967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1441755-1441839:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442923-1443060:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443532-1443633:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1443723-1443779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444101-1444238:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1444926-1445008:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1450521-1450684:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1451463-1451607:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1452396-1452556:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1453062-1453115:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1453378-1453509:1:exon

LXN
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1445189..1450102)
location: region:1445189-1450102:-1
so has part: feature:1445189-1450102:-1:exon
subclass of: SO_0000010

115906710
type: Gene
SIO_000068: ncbigene

position:1445189:-1
position: 1445189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450102:-1
position: 1450102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445189-1450102:-1:exon

LXN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LXN
product: latexin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954096.1
SIO_010081: LXN
subclass of: SO_0000673
so part of: LXN
location: complement(join(1445189..1445745,1446367..1446429,1447499..1447635,1448189..1448363,1448820..1448882,1449972..1450102))
location: region:1445189-1450102:-1
so has part: feature:1449972-1450102:-1:exon
so has part: feature:1448820-1448882:-1:exon
so has part: feature:1448189-1448363:-1:exon
so has part: feature:1447499-1447635:-1:exon
so has part: feature:1446367-1446429:-1:exon
so has part: feature:1445189-1445745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1449972-1450102:-1:exon

position:1449972:-1
position: 1449972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1448820-1448882:-1:exon

position:1448820:-1
position: 1448820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448882:-1
position: 1448882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1448189-1448363:-1:exon

position:1448189:-1
position: 1448189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448363:-1
position: 1448363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1447499-1447635:-1:exon

position:1447499:-1
position: 1447499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447635:-1
position: 1447635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1446367-1446429:-1:exon

position:1446367:-1
position: 1446367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446429:-1
position: 1446429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1445189-1445745:-1:exon

position:1445745:-1
position: 1445745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LXN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: latexin
translation: MELPPGHFSASRAAAVAVEYLRYLRGGPGSGLRLRELRRARRQDIDDVGHKYCLELELEDVLDKDRTVNCTAEVLYPLGSKTSAPDVQLTVQGELRSTEEADKEFYNRIRSLEKELVAENIPDSHGNVPPELEPIHLLAWVASGYVIWQNSTENTKFHLAQVKHVKQVKRSDEDLQFDFVVLLHEMVSQEVLPWEVTLLWHPQRGARVPQSHAAGAGSS
SIO_010081: LXN
subclass of: SO_0000673
so part of: LXN
location: complement(join(1445653..1445745,1446367..1446429,1447499..1447635,1448189..1448363,1448820..1448882,1449972..1450100))
location: region:1445653-1450100:-1
so has part: feature:1449972-1450100:-1:exon
so has part: feature:1448820-1448882:-1:exon
so has part: feature:1448189-1448363:-1:exon
so has part: feature:1447499-1447635:-1:exon
so has part: feature:1446367-1446429:-1:exon
so has part: feature:1445653-1445745:-1:exon

XP_030809956.1
type: Protein
SIO_000068: ncbiprotein

position:1445653:-1
position: 1445653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450100:-1
position: 1450100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449972-1450100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448820-1448882:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1448189-1448363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1447499-1447635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446367-1446429:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1445653-1445745:-1:exon

LOC115906709
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115906709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1456050..1463493)
location: region:1456050-1463493:-1
so has part: feature:1456050-1463493:-1:exon
subclass of: SO_0000010

115906709
type: Gene
SIO_000068: ncbigene

position:1456050:-1
position: 1456050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463493:-1
position: 1463493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456050-1463493:-1:exon

LOC115906709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115906709
product: ovocalyxin-32-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954094.1
SIO_010081: LOC115906709
subclass of: SO_0000673
so part of: LOC115906709
location: complement(join(1456050..1456620,1456709..1456771,1457414..1457550,1458187..1458361,1459148..1459210,1463210..1463493))
location: region:1456050-1463493:-1
so has part: feature:1463210-1463493:-1:exon
so has part: feature:1459148-1459210:-1:exon
so has part: feature:1458187-1458361:-1:exon
so has part: feature:1457414-1457550:-1:exon
so has part: feature:1456709-1456771:-1:exon
so has part: feature:1456050-1456620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1463210-1463493:-1:exon

position:1463210:-1
position: 1463210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1459148-1459210:-1:exon

position:1459148:-1
position: 1459148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459210:-1
position: 1459210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1458187-1458361:-1:exon

position:1458187:-1
position: 1458187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458361:-1
position: 1458361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1457414-1457550:-1:exon

position:1457414:-1
position: 1457414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457550:-1
position: 1457550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1456709-1456771:-1:exon

position:1456709:-1
position: 1456709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456771:-1
position: 1456771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1456050-1456620:-1:exon

position:1456620:-1
position: 1456620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115906709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115906709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ovocalyxin-32-like
translation: MPGLRALPGLRASPPAFLLLLALALPRGSLAVQQLEPGSRSAAAAARVALQYRNFKAGSLGGLRVLGHVRKATLKNIPESGHKYYLQFSTEDYRTGEDAGNCLATVLFPKKKSRPVVSIKCSHTKDQKEIQEEDNKFYQRIRHLSKPIIANNIPDSYGNIEPALEPVWALAVAGSSSIVWEKSTETLAYFLAQVKSVRQWIRKDDFVEFDYTVLLHEMPTQEIISCHMRLTWLPGQPLKVKHFCAPEGHGAEQGSGAEAGSAAGPAAEKGASF
SIO_010081: LOC115906709
subclass of: SO_0000673
so part of: LOC115906709
location: complement(join(1456462..1456620,1456709..1456771,1457414..1457550,1458187..1458361,1459148..1459210,1463210..1463434))
location: region:1456462-1463434:-1
so has part: feature:1463210-1463434:-1:exon
so has part: feature:1459148-1459210:-1:exon
so has part: feature:1458187-1458361:-1:exon
so has part: feature:1457414-1457550:-1:exon
so has part: feature:1456709-1456771:-1:exon
so has part: feature:1456462-1456620:-1:exon

XP_030809954.1
type: Protein
SIO_000068: ncbiprotein

position:1456462:-1
position: 1456462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463434:-1
position: 1463434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463210-1463434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1459148-1459210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1458187-1458361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1457414-1457550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1456709-1456771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1456462-1456620:-1:exon

MFSD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MFSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1481358..1491184
location: region:1481358-1491184:1
so has part: feature:1481358-1491184:1:exon
subclass of: SO_0000010

115906699
type: Gene
SIO_000068: ncbigene

position:1481358:1
position: 1481358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1491184:1
position: 1491184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481358-1491184:1:exon

MFSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MFSD1
product: major facilitator superfamily domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954078.1
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481358..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489027,1490311..1490557)
location: region:1481358-1490557:1
so has part: feature:1481358-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489027:1:exon
so has part: feature:1490311-1490557:1:exon

position:1490557:1
position: 1490557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481358-1481500:1:exon

position:1481500:1
position: 1481500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

position:1481591:1
position: 1481591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481643:1
position: 1481643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

position:1482025:1
position: 1482025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482137:1
position: 1482137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

position:1482550:1
position: 1482550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482592:1
position: 1482592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

position:1483025:1
position: 1483025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483092:1
position: 1483092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

position:1483445:1
position: 1483445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483553:1
position: 1483553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

position:1483995:1
position: 1483995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484097:1
position: 1484097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

position:1484765:1
position: 1484765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484863:1
position: 1484863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

position:1485372:1
position: 1485372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1485483:1
position: 1485483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

position:1485947:1
position: 1485947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486003:1
position: 1486003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

position:1486514:1
position: 1486514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486670:1
position: 1486670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

position:1487433:1
position: 1487433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487530:1
position: 1487530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

position:1488261:1
position: 1488261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488373:1
position: 1488373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

position:1488764:1
position: 1488764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488811:1
position: 1488811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489027:1:exon

position:1488967:1
position: 1488967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1489027:1
position: 1489027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1490311-1490557:1:exon

position:1490311:1
position: 1490311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MFSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MFSD1
product: major facilitator superfamily domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954079.1
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481359..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489027,1490311..1490425,1490651..1491184)
location: region:1481359-1491184:1
so has part: feature:1481359-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489027:1:exon
so has part: feature:1490311-1490425:1:exon
so has part: feature:1490651-1491184:1:exon

position:1481359:1
position: 1481359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481359-1481500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489027:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1490311-1490425:1:exon

position:1490425:1
position: 1490425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1490651-1491184:1:exon

position:1490651:1
position: 1490651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MFSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MFSD1
product: major facilitator superfamily domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954081.1
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481364..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489031)
location: region:1481364-1489031:1
so has part: feature:1481364-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489031:1:exon

position:1481364:1
position: 1481364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1489031:1
position: 1489031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481364-1481500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489031:1:exon

MFSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MFSD1
product: major facilitator superfamily domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954080.1
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481365..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489027,1489493..1490118)
location: region:1481365-1490118:1
so has part: feature:1481365-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489027:1:exon
so has part: feature:1489493-1490118:1:exon

position:1481365:1
position: 1481365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490118:1
position: 1490118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481365-1481500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489027:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1489493-1490118:1:exon

position:1489493:1
position: 1489493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MFSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MFSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 1 isoform X2
translation: MCFLGFGSYFCYDNPAALQTQVQRDMKVNTAQFMALYAWYSWPNVVLCFFGGFLIDRVFGIRLGTVIFSIFVCAGQVVFALGALFNTFWLMEVGRFIFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNIMGWIYSRVQDLLGYAGPSTLGLALLIGGVTCVFSLSCALILAYLDRRAERLLCKEQGKTGEVIKLTDVKDFSLSLWLIFVICVCYYAAVFPFIGLGKVFFIEKFRFSPQEASAINSIVYIISAPMSPVFGLLVDKVGKNIIWVLCAVVTTLASHIMLAFTFWNPWIAMCLLGVAYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVIAIAAGMILDTRGYLFLEVFFSACVCLSLLAVVMLYFVNHLTGGDLNWSAKKRAKLQKAAASEAEEQERLRRQNEDDLAKLLPKADAFSLRNKYLSKLGAQLPAHCSSCFSTLAHRSVLK
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481482..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489027,1490311..1490425,1490651..1490710)
location: region:1481482-1490710:1
so has part: feature:1481482-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489027:1:exon
so has part: feature:1490311-1490425:1:exon
so has part: feature:1490651-1490710:1:exon

XP_030809939.1
type: Protein
SIO_000068: ncbiprotein

position:1481482:1
position: 1481482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490710:1
position: 1490710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481482-1481500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489027:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1490311-1490425:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1490651-1490710:1:exon

MFSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MFSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 1 isoform X1
translation: MCFLGFGSYFCYDNPAALQTQVQRDMKVNTAQFMALYAWYSWPNVVLCFFGGFLIDRVFGIRLGTVIFSIFVCAGQVVFALGALFNTFWLMEVGRFIFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNIMGWIYSRVQDLLGYAGPSTLGLALLIGGVTCVFSLSCALILAYLDRRAERLLCKEQGKTGEVIKLTDVKDFSLSLWLIFVICVCYYAAVFPFIGLGKVFFIEKFRFSPQEASAINSIVYIISAPMSPVFGLLVDKVGKNIIWVLCAVVTTLASHIMLAFTFWNPWIAMCLLGVAYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVIAIAAGMILDTRGYLFLEVFFSACVCLSLLAVVMLYFVNHLTGGDLNWSAKKRAKLQKAAASEAEEQERLRRQNEDDLAKLLPKADAFSLRNKYLSKLGAQVSLTGAHRQFKTRIIRGLFKEFGWF
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481482..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489027,1490311..1490503)
location: region:1481482-1490503:1
so has part: feature:1481482-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489027:1:exon
so has part: feature:1490311-1490503:1:exon

XP_030809938.1
type: Protein
SIO_000068: ncbiprotein

position:1490503:1
position: 1490503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481482-1481500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489027:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1490311-1490503:1:exon

MFSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MFSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 1 isoform X3
translation: MCFLGFGSYFCYDNPAALQTQVQRDMKVNTAQFMALYAWYSWPNVVLCFFGGFLIDRVFGIRLGTVIFSIFVCAGQVVFALGALFNTFWLMEVGRFIFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNIMGWIYSRVQDLLGYAGPSTLGLALLIGGVTCVFSLSCALILAYLDRRAERLLCKEQGKTGEVIKLTDVKDFSLSLWLIFVICVCYYAAVFPFIGLGKVFFIEKFRFSPQEASAINSIVYIISAPMSPVFGLLVDKVGKNIIWVLCAVVTTLASHIMLAFTFWNPWIAMCLLGVAYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVIAIAAGMILDTRGYLFLEVFFSACVCLSLLAVVMLYFVNHLTGGDLNWSAKKRAKLQKAAASEKES
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481482..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489027,1489493..1489505)
location: region:1481482-1489505:1
so has part: feature:1481482-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489027:1:exon
so has part: feature:1489493-1489505:1:exon

XP_030809940.1
type: Protein
SIO_000068: ncbiprotein

position:1489505:1
position: 1489505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481482-1481500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489027:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1489493-1489505:1:exon

MFSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MFSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 1 isoform X4
translation: MCFLGFGSYFCYDNPAALQTQVQRDMKVNTAQFMALYAWYSWPNVVLCFFGGFLIDRVFGIRLGTVIFSIFVCAGQVVFALGALFNTFWLMEVGRFIFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNIMGWIYSRVQDLLGYAGPSTLGLALLIGGVTCVFSLSCALILAYLDRRAERLLCKEQGKTGEVIKLTDVKDFSLSLWLIFVICVCYYAAVFPFIGLGKVFFIEKFRFSPQEASAINSIVYIISAPMSPVFGLLVDKVGKNIIWVLCAVVTTLASHIMLAFTFWNPWIAMCLLGVAYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVIAIAAGMILDTRGYLFLEVFFSACVCLSLLAVVMLYFVNHLTGGDLNWSAKKRAKLQKAAASE
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1481482..1481500,1481591..1481643,1482025..1482137,1482550..1482592,1483025..1483092,1483445..1483553,1483995..1484097,1484765..1484863,1485372..1485483,1485947..1486003,1486514..1486670,1487433..1487530,1488261..1488373,1488764..1488811,1488967..1489031)
location: region:1481482-1489031:1
so has part: feature:1481482-1481500:1:exon
so has part: feature:1481591-1481643:1:exon
so has part: feature:1482025-1482137:1:exon
so has part: feature:1482550-1482592:1:exon
so has part: feature:1483025-1483092:1:exon
so has part: feature:1483445-1483553:1:exon
so has part: feature:1483995-1484097:1:exon
so has part: feature:1484765-1484863:1:exon
so has part: feature:1485372-1485483:1:exon
so has part: feature:1485947-1486003:1:exon
so has part: feature:1486514-1486670:1:exon
so has part: feature:1487433-1487530:1:exon
so has part: feature:1488261-1488373:1:exon
so has part: feature:1488764-1488811:1:exon
so has part: feature:1488967-1489031:1:exon

XP_030809941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1481482-1481500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481591-1481643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482025-1482137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482550-1482592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1483025-1483092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483445-1483553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483995-1484097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484765-1484863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485372-1485483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485947-1486003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486514-1486670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1487433-1487530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488261-1488373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1488764-1488811:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1488967-1489031:1:exon

LOC115906703
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115906703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1513189..1596205
location: region:1513189-1596205:1
so has part: feature:1513189-1596205:1:exon
subclass of: SO_0000010

115906703
type: Gene
SIO_000068: ncbigene

position:1513189:1
position: 1513189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596205:1
position: 1596205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513189-1596205:1:exon

LOC115906703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115906703
product: schwannomin-interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 18 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954085.1
SIO_010081: LOC115906703
subclass of: SO_0000673
so part of: LOC115906703
location: join(1513189..1513307,1527108..1527172,1527999..1528079,1530474..1530663,1559832..1560296,1590147..1590265,1592280..1592397,1593119..1593316,1594019..1594142,1594384..1594477,1595589..1596205)
location: region:1513189-1596205:1
so has part: feature:1513189-1513307:1:exon
so has part: feature:1527108-1527172:1:exon
so has part: feature:1527999-1528079:1:exon
so has part: feature:1530474-1530663:1:exon
so has part: feature:1559832-1560296:1:exon
so has part: feature:1590147-1590265:1:exon
so has part: feature:1592280-1592397:1:exon
so has part: feature:1593119-1593316:1:exon
so has part: feature:1594019-1594142:1:exon
so has part: feature:1594384-1594477:1:exon
so has part: feature:1595589-1596205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1513189-1513307:1:exon

position:1513307:1
position: 1513307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1527108-1527172:1:exon

position:1527108:1
position: 1527108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527172:1
position: 1527172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1527999-1528079:1:exon

position:1527999:1
position: 1527999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528079:1
position: 1528079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1530474-1530663:1:exon

position:1530474:1
position: 1530474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1530663:1
position: 1530663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1559832-1560296:1:exon

position:1559832:1
position: 1559832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560296:1
position: 1560296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1590147-1590265:1:exon

position:1590147:1
position: 1590147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590265:1
position: 1590265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1592280-1592397:1:exon

position:1592280:1
position: 1592280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592397:1
position: 1592397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1593119-1593316:1:exon

position:1593119:1
position: 1593119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593316:1
position: 1593316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1594019-1594142:1:exon

position:1594019:1
position: 1594019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594142:1
position: 1594142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1594384-1594477:1:exon

position:1594384:1
position: 1594384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594477:1
position: 1594477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1595589-1596205:1:exon

position:1595589:1
position: 1595589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115906703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115906703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQCJ-SCHIP1 readthrough transcript protein isoform X1
translation: MRLEELRRLQHTLEQVNDGKDSLQSHQLTMDEENNIQEYPINLQPLESKVKIIQRAWREHLQRQDLSPSPELRDKGSPSSASPTSPVSPMSPRSPASGKMSRSVSMNTFSDSSTPDSREDGMDLGSDAGSSRSSSESNSSKATPCSEGKSSPSPSSLDLAALEDSEEEEEEEEDGGSPPSPPRCPAAHGRRCGPAAAAARRCPRPRPPPRSDPAQRRRGAAAGPGGRRSAGARPPRDPQPPAMDWAALERHLAGLQCREQERKARASPASAQKNERESIRQKLALGSFFDDGPGLYTSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDGDDSKTETSLDTPLSPMSKQSSSYSDRDTTEEESESLDDMDFLSRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQDAMLVDIEDLTRHAESQQKHLAEKMPAK
SIO_010081: LOC115906703
subclass of: SO_0000673
so part of: LOC115906703
location: join(1513299..1513307,1527108..1527172,1527999..1528079,1530474..1530663,1559832..1560296,1590147..1590265,1592280..1592397,1593119..1593316,1594019..1594142,1594384..1594477,1595589..1595640)
location: region:1513299-1595640:1
so has part: feature:1513299-1513307:1:exon
so has part: feature:1527108-1527172:1:exon
so has part: feature:1527999-1528079:1:exon
so has part: feature:1530474-1530663:1:exon
so has part: feature:1559832-1560296:1:exon
so has part: feature:1590147-1590265:1:exon
so has part: feature:1592280-1592397:1:exon
so has part: feature:1593119-1593316:1:exon
so has part: feature:1594019-1594142:1:exon
so has part: feature:1594384-1594477:1:exon
so has part: feature:1595589-1595640:1:exon

XP_030809945.1
type: Protein
SIO_000068: ncbiprotein

position:1513299:1
position: 1513299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595640:1
position: 1595640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513299-1513307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527108-1527172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1527999-1528079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1530474-1530663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559832-1560296:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1590147-1590265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1592280-1592397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1593119-1593316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1594019-1594142:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1594384-1594477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1595589-1595640:1:exon

LOC115906703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115906703
product: schwannomin-interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 15 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954087.1
SIO_010081: LOC115906703
subclass of: SO_0000673
so part of: LOC115906703
location: join(1579394..1579604,1590147..1590265,1592280..1592397,1593119..1593316,1594019..1594142,1594384..1594477,1595589..1596205)
location: region:1579394-1596205:1
so has part: feature:1579394-1579604:1:exon
so has part: feature:1590147-1590265:1:exon
so has part: feature:1592280-1592397:1:exon
so has part: feature:1593119-1593316:1:exon
so has part: feature:1594019-1594142:1:exon
so has part: feature:1594384-1594477:1:exon
so has part: feature:1595589-1596205:1:exon

position:1579394:1
position: 1579394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579394-1579604:1:exon

position:1579604:1
position: 1579604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1590147-1590265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1592280-1592397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593119-1593316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594019-1594142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594384-1594477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595589-1596205:1:exon

LOC115906703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115906703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: schwannomin-interacting protein 1 isoform X3
translation: MVHQENCSYQAQKNERESIRQKLALGSFFDDGPGLYTSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDGDDSKTETSLDTPLSPMSKQSSSYSDRDTTEEESESLDDMDFLSRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQDAMLVDIEDLTRHAESQQKHLAEKMPAK
SIO_010081: LOC115906703
subclass of: SO_0000673
so part of: LOC115906703
location: join(1579575..1579604,1590147..1590265,1592280..1592397,1593119..1593316,1594019..1594142,1594384..1594477,1595589..1595640)
location: region:1579575-1595640:1
so has part: feature:1579575-1579604:1:exon
so has part: feature:1590147-1590265:1:exon
so has part: feature:1592280-1592397:1:exon
so has part: feature:1593119-1593316:1:exon
so has part: feature:1594019-1594142:1:exon
so has part: feature:1594384-1594477:1:exon
so has part: feature:1595589-1595640:1:exon

XP_030809947.1
type: Protein
SIO_000068: ncbiprotein

position:1579575:1
position: 1579575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579575-1579604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590147-1590265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1592280-1592397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593119-1593316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594019-1594142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594384-1594477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595589-1595640:1:exon

LOC115906703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115906703
product: schwannomin-interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954086.1
SIO_010081: LOC115906703
subclass of: SO_0000673
so part of: LOC115906703
location: join(1586162..1586375,1590147..1590265,1592280..1592397,1593119..1593316,1594019..1594142,1594384..1594477,1595589..1596011)
location: region:1586162-1596011:1
so has part: feature:1586162-1586375:1:exon
so has part: feature:1590147-1590265:1:exon
so has part: feature:1592280-1592397:1:exon
so has part: feature:1593119-1593316:1:exon
so has part: feature:1594019-1594142:1:exon
so has part: feature:1594384-1594477:1:exon
so has part: feature:1595589-1596011:1:exon

position:1586162:1
position: 1586162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596011:1
position: 1596011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586162-1586375:1:exon

position:1586375:1
position: 1586375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1590147-1590265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1592280-1592397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593119-1593316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594019-1594142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594384-1594477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595589-1596011:1:exon

LOC115906703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115906703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: schwannomin-interacting protein 1 isoform X2
translation: MQREPGAGQMSRERDDGMGDVIRKASPPPAEGSYKKAQKNERESIRQKLALGSFFDDGPGLYTSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDGDDSKTETSLDTPLSPMSKQSSSYSDRDTTEEESESLDDMDFLSRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQDAMLVDIEDLTRHAESQQKHLAEKMPAK
SIO_010081: LOC115906703
subclass of: SO_0000673
so part of: LOC115906703
location: join(1586268..1586375,1590147..1590265,1592280..1592397,1593119..1593316,1594019..1594142,1594384..1594477,1595589..1595640)
location: region:1586268-1595640:1
so has part: feature:1586268-1586375:1:exon
so has part: feature:1590147-1590265:1:exon
so has part: feature:1592280-1592397:1:exon
so has part: feature:1593119-1593316:1:exon
so has part: feature:1594019-1594142:1:exon
so has part: feature:1594384-1594477:1:exon
so has part: feature:1595589-1595640:1:exon

XP_030809946.1
type: Protein
SIO_000068: ncbiprotein

position:1586268:1
position: 1586268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586268-1586375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590147-1590265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1592280-1592397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593119-1593316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594019-1594142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594384-1594477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595589-1595640:1:exon

CARD8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CARD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1611782..1622417)
location: region:1611782-1622417:-1
so has part: feature:1611782-1622417:-1:exon
subclass of: SO_0000010

115907013
type: Gene
SIO_000068: ncbigene

position:1611782:-1
position: 1611782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622417:-1
position: 1622417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611782-1622417:-1:exon

CARD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CARD8
product: caspase recruitment domain family member 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954633.1
SIO_010081: CARD8
subclass of: SO_0000673
so part of: CARD8
location: complement(join(1611782..1611993,1612503..1612586,1612673..1612726,1613424..1613562,1613794..1613928,1614973..1615223,1615975..1616195,1617214..1617263,1617378..1617421,1617514..1617561,1619055..1619105,1619607..1619669,1620405..1620436,1622330..1622417))
location: region:1611782-1622417:-1
so has part: feature:1622330-1622417:-1:exon
so has part: feature:1620405-1620436:-1:exon
so has part: feature:1619607-1619669:-1:exon
so has part: feature:1619055-1619105:-1:exon
so has part: feature:1617514-1617561:-1:exon
so has part: feature:1617378-1617421:-1:exon
so has part: feature:1617214-1617263:-1:exon
so has part: feature:1615975-1616195:-1:exon
so has part: feature:1614973-1615223:-1:exon
so has part: feature:1613794-1613928:-1:exon
so has part: feature:1613424-1613562:-1:exon
so has part: feature:1612673-1612726:-1:exon
so has part: feature:1612503-1612586:-1:exon
so has part: feature:1611782-1611993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1622330-1622417:-1:exon

position:1622330:-1
position: 1622330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1620405-1620436:-1:exon

position:1620405:-1
position: 1620405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620436:-1
position: 1620436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1619607-1619669:-1:exon

position:1619607:-1
position: 1619607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619669:-1
position: 1619669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1619055-1619105:-1:exon

position:1619055:-1
position: 1619055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619105:-1
position: 1619105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1617514-1617561:-1:exon

position:1617514:-1
position: 1617514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617561:-1
position: 1617561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1617378-1617421:-1:exon

position:1617378:-1
position: 1617378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617421:-1
position: 1617421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1617214-1617263:-1:exon

position:1617214:-1
position: 1617214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617263:-1
position: 1617263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1615975-1616195:-1:exon

position:1615975:-1
position: 1615975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616195:-1
position: 1616195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1614973-1615223:-1:exon

position:1614973:-1
position: 1614973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615223:-1
position: 1615223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1613794-1613928:-1:exon

position:1613794:-1
position: 1613794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613928:-1
position: 1613928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1613424-1613562:-1:exon

position:1613424:-1
position: 1613424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613562:-1
position: 1613562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1612673-1612726:-1:exon

position:1612673:-1
position: 1612673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612726:-1
position: 1612726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1612503-1612586:-1:exon

position:1612503:-1
position: 1612503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612586:-1
position: 1612586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1611782-1611993:-1:exon

position:1611993:-1
position: 1611993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CARD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CARD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 8
translation: MSGPAPEPDSGAESLSSDEKEVTPNGVEGSSGSGSAEEQPEGEASSEDSSSSSSEEESDEEQEEKESPPYCNESGGSCLAPCEHCRNENDQKEQVTPRRLAGGQFMVQLEAEGSYQCSSTGLIFEVTGRARITYSLLSWSKYAQLVQPPWIVGGPLFDVRCSAPGALRCIQFPHCLCLGGQGAAVAFKVLHIKGGGVAIEPSAEFSASHVKWVVSSLSPVGPLIHSQEPLQYHGAVILYKAIDEHPSLSFWVYLATNNDSFIKDISKAVKHSKRKFVQIEKPPVCQKLLQEGKKYRLICEPEAEITPEEIEFVDGSLLKLKSYFEVYLEKPDDFTLSLVEQDSDETVWKAKLRERDWIHYEQNKNEQKRSTGSVKRRKPALSILEEEGLHSKKQKTGGTADEMGAKSLTDQQLLVIAKLLDRHWREMAIECLQMERRHRTSPGGPTMSAGEGNRVSIRAHGGRRGAGKTT
SIO_010081: CARD8
subclass of: SO_0000673
so part of: CARD8
location: complement(join(1611782..1611993,1612503..1612586,1612673..1612726,1613424..1613562,1613794..1613928,1614973..1615223,1615975..1616195,1617214..1617263,1617378..1617421,1617514..1617561,1619055..1619105,1619607..1619669,1620405..1620436,1622330..1622358))
location: region:1611782-1622358:-1
so has part: feature:1622330-1622358:-1:exon
so has part: feature:1620405-1620436:-1:exon
so has part: feature:1619607-1619669:-1:exon
so has part: feature:1619055-1619105:-1:exon
so has part: feature:1617514-1617561:-1:exon
so has part: feature:1617378-1617421:-1:exon
so has part: feature:1617214-1617263:-1:exon
so has part: feature:1615975-1616195:-1:exon
so has part: feature:1614973-1615223:-1:exon
so has part: feature:1613794-1613928:-1:exon
so has part: feature:1613424-1613562:-1:exon
so has part: feature:1612673-1612726:-1:exon
so has part: feature:1612503-1612586:-1:exon
so has part: feature:1611782-1611993:-1:exon

XP_030810493.1
type: Protein
SIO_000068: ncbiprotein

position:1622358:-1
position: 1622358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622330-1622358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1620405-1620436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1619607-1619669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1619055-1619105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1617514-1617561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1617378-1617421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1617214-1617263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1615975-1616195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1614973-1615223:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1613794-1613928:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1613424-1613562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1612673-1612726:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1612503-1612586:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1611782-1611993:-1:exon

IFT80
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: IFT80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1638377..1665871)
location: region:1638377-1665871:-1
so has part: feature:1638377-1665871:-1:exon
subclass of: SO_0000010

115906697
type: Gene
SIO_000068: ncbigene

position:1638377:-1
position: 1638377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665871:-1
position: 1665871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1638377-1665871:-1:exon

IFT80
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: IFT80
product: intraflagellar transport 80, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954075.1
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1638377..1639431,1641730..1641853,1642884..1643056,1643140..1643229,1645166..1645337,1645742..1645889,1646266..1646401,1646814..1646878,1647443..1647606,1648091..1648165,1648735..1648853,1650329..1650508,1653499..1653636,1655349..1655438,1655765..1655874,1659136..1659204,1660998..1661108,1663673..1663894,1664472..1664548,1665654..1665871))
location: region:1638377-1665871:-1
so has part: feature:1665654-1665871:-1:exon
so has part: feature:1664472-1664548:-1:exon
so has part: feature:1663673-1663894:-1:exon
so has part: feature:1660998-1661108:-1:exon
so has part: feature:1659136-1659204:-1:exon
so has part: feature:1655765-1655874:-1:exon
so has part: feature:1655349-1655438:-1:exon
so has part: feature:1653499-1653636:-1:exon
so has part: feature:1650329-1650508:-1:exon
so has part: feature:1648735-1648853:-1:exon
so has part: feature:1648091-1648165:-1:exon
so has part: feature:1647443-1647606:-1:exon
so has part: feature:1646814-1646878:-1:exon
so has part: feature:1646266-1646401:-1:exon
so has part: feature:1645742-1645889:-1:exon
so has part: feature:1645166-1645337:-1:exon
so has part: feature:1643140-1643229:-1:exon
so has part: feature:1642884-1643056:-1:exon
so has part: feature:1641730-1641853:-1:exon
so has part: feature:1638377-1639431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1665654-1665871:-1:exon

position:1665654:-1
position: 1665654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1664472-1664548:-1:exon

position:1664472:-1
position: 1664472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664548:-1
position: 1664548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1663673-1663894:-1:exon

position:1663673:-1
position: 1663673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663894:-1
position: 1663894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1660998-1661108:-1:exon

position:1660998:-1
position: 1660998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661108:-1
position: 1661108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1659136-1659204:-1:exon

position:1659136:-1
position: 1659136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659204:-1
position: 1659204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1655765-1655874:-1:exon

position:1655765:-1
position: 1655765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655874:-1
position: 1655874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1655349-1655438:-1:exon

position:1655349:-1
position: 1655349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655438:-1
position: 1655438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1653499-1653636:-1:exon

position:1653499:-1
position: 1653499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1653636:-1
position: 1653636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1650329-1650508:-1:exon

position:1650329:-1
position: 1650329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1650508:-1
position: 1650508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1648735-1648853:-1:exon

position:1648735:-1
position: 1648735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648853:-1
position: 1648853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1648091-1648165:-1:exon

position:1648091:-1
position: 1648091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648165:-1
position: 1648165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1647443-1647606:-1:exon

position:1647443:-1
position: 1647443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647606:-1
position: 1647606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1646814-1646878:-1:exon

position:1646814:-1
position: 1646814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646878:-1
position: 1646878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1646266-1646401:-1:exon

position:1646266:-1
position: 1646266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646401:-1
position: 1646401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1645742-1645889:-1:exon

position:1645742:-1
position: 1645742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1645889:-1
position: 1645889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1645166-1645337:-1:exon

position:1645166:-1
position: 1645166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1645337:-1
position: 1645337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1643140-1643229:-1:exon

position:1643140:-1
position: 1643140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643229:-1
position: 1643229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1642884-1643056:-1:exon

position:1642884:-1
position: 1642884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643056:-1
position: 1643056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1641730-1641853:-1:exon

position:1641730:-1
position: 1641730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641853:-1
position: 1641853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1638377-1639431:-1:exon

position:1639431:-1
position: 1639431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFT80
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: IFT80
product: intraflagellar transport 80, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030954076.1
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1638377..1639431,1641730..1641853,1642884..1643056,1643140..1643229,1645166..1645337,1645742..1645889,1646266..1646401,1646814..1646878,1647443..1647606,1648091..1648165,1648735..1648853,1650329..1650508,1653499..1653636,1655349..1655438,1655765..1655874,1659136..1659204,1660998..1661108,1663673..1663894,1664472..1664548,1664696..1664732))
location: region:1638377-1664732:-1
so has part: feature:1664696-1664732:-1:exon
so has part: feature:1664472-1664548:-1:exon
so has part: feature:1663673-1663894:-1:exon
so has part: feature:1660998-1661108:-1:exon
so has part: feature:1659136-1659204:-1:exon
so has part: feature:1655765-1655874:-1:exon
so has part: feature:1655349-1655438:-1:exon
so has part: feature:1653499-1653636:-1:exon
so has part: feature:1650329-1650508:-1:exon
so has part: feature:1648735-1648853:-1:exon
so has part: feature:1648091-1648165:-1:exon
so has part: feature:1647443-1647606:-1:exon
so has part: feature:1646814-1646878:-1:exon
so has part: feature:1646266-1646401:-1:exon
so has part: feature:1645742-1645889:-1:exon
so has part: feature:1645166-1645337:-1:exon
so has part: feature:1643140-1643229:-1:exon
so has part: feature:1642884-1643056:-1:exon
so has part: feature:1641730-1641853:-1:exon
so has part: feature:1638377-1639431:-1:exon

position:1664732:-1
position: 1664732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664696-1664732:-1:exon

position:1664696:-1
position: 1664696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1664472-1664548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1663673-1663894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1660998-1661108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1659136-1659204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655765-1655874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1655349-1655438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1653499-1653636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1650329-1650508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1648735-1648853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1648091-1648165:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1647443-1647606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646814-1646878:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1646266-1646401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1645742-1645889:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1645166-1645337:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1643140-1643229:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1642884-1643056:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1641730-1641853:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1638377-1639431:-1:exon

IFT80
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: IFT80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 80 homolog
translation: MRLKTSLLKEPKHKDLVSCVGWTTADELFSCSDDHQIMKWNPVTSETTRVLKLPDDVYPLDLHWFPRGIGGKKQSQAESFVLTSSDGKFHLISKLGRVEKSVEAHFGAVLAGRWNYEGTALVTVGEDGQVKIWSKSGMLRSTLAQQGTPVYSVSWAPDSDKVLYTSGQQLIIKPLQPNAKVLQWKAHDGLILKTDWNSVNDLILSAGEDCRYKVWDSFGRVLYNSQPHEYPITAIAWALDGELFAVGSFNTLRLCDKTGWSYALEKPNTGSIFAISWSIDGTQLAGACGNGQVIFAHVVEQHWEWQNFQITLIKRRTMKVHNVINDAVDLLEFRDRVIKASLNYGYLVVSTSLQCYVFSTRNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGLYLYSYEGRLISSPKYPGMRTDILNALTVSLSNDTLAVKDKADEKVIYIFEALSGKPLGDGKPLTHKTEIVEIALDQKGLTSERKIAFIDKNRDLFITSVKRFGKEQKIVKIGTMVQSLAWNDSCNILCGIQDSRFTVWYYPNTVYVDKDLLPKTLYEKDASEFSKSPQIVSFVGNQVTIRRADGSLVHLHISPYPAILHGHVSSSRWQDGLRLCRFVKDQTLWACLAAMAVASKDMSTAEIAYAAIGEIDKVQYINSIKELPSKESRLAHMLLFSGNCQEAETLLLQAGLVYQAIQININLYNWERALELAVKHRTHVDTVLAYRQKFLEDFGKKETNQRFLQYAEGLEVDWNKIKAKIEMEIAKERERAAASAAGRSSVTVQQ
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1639318..1639431,1641730..1641853,1642884..1643056,1643140..1643229,1645166..1645337,1645742..1645889,1646266..1646401,1646814..1646878,1647443..1647606,1648091..1648165,1648735..1648853,1650329..1650508,1653499..1653636,1655349..1655438,1655765..1655874,1659136..1659204,1660998..1661108,1663673..1663894,1664472..1664508))
location: region:1639318-1664508:-1
so has part: feature:1664472-1664508:-1:exon
so has part: feature:1663673-1663894:-1:exon
so has part: feature:1660998-1661108:-1:exon
so has part: feature:1659136-1659204:-1:exon
so has part: feature:1655765-1655874:-1:exon
so has part: feature:1655349-1655438:-1:exon
so has part: feature:1653499-1653636:-1:exon
so has part: feature:1650329-1650508:-1:exon
so has part: feature:1648735-1648853:-1:exon
so has part: feature:1648091-1648165:-1:exon
so has part: feature:1647443-1647606:-1:exon
so has part: feature:1646814-1646878:-1:exon
so has part: feature:1646266-1646401:-1:exon
so has part: feature:1645742-1645889:-1:exon
so has part: feature:1645166-1645337:-1:exon
so has part: feature:1643140-1643229:-1:exon
so has part: feature:1642884-1643056:-1:exon
so has part: feature:1641730-1641853:-1:exon
so has part: feature:1639318-1639431:-1:exon

XP_030809935.1
type: Protein
SIO_000068: ncbiprotein

position:1639318:-1
position: 1639318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664508:-1
position: 1664508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664472-1664508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1663673-1663894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660998-1661108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1659136-1659204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655765-1655874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655349-1655438:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1653499-1653636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1650329-1650508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1648735-1648853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1648091-1648165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1647443-1647606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646814-1646878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646266-1646401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1645742-1645889:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1645166-1645337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1643140-1643229:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1642884-1643056:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1641730-1641853:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1639318-1639431:-1:exon

IFT80
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: IFT80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 80 homolog
translation: MRLKTSLLKEPKHKDLVSCVGWTTADELFSCSDDHQIMKWNPVTSETTRVLKLPDDVYPLDLHWFPRGIGGKKQSQAESFVLTSSDGKFHLISKLGRVEKSVEAHFGAVLAGRWNYEGTALVTVGEDGQVKIWSKSGMLRSTLAQQGTPVYSVSWAPDSDKVLYTSGQQLIIKPLQPNAKVLQWKAHDGLILKTDWNSVNDLILSAGEDCRYKVWDSFGRVLYNSQPHEYPITAIAWALDGELFAVGSFNTLRLCDKTGWSYALEKPNTGSIFAISWSIDGTQLAGACGNGQVIFAHVVEQHWEWQNFQITLIKRRTMKVHNVINDAVDLLEFRDRVIKASLNYGYLVVSTSLQCYVFSTRNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGLYLYSYEGRLISSPKYPGMRTDILNALTVSLSNDTLAVKDKADEKVIYIFEALSGKPLGDGKPLTHKTEIVEIALDQKGLTSERKIAFIDKNRDLFITSVKRFGKEQKIVKIGTMVQSLAWNDSCNILCGIQDSRFTVWYYPNTVYVDKDLLPKTLYEKDASEFSKSPQIVSFVGNQVTIRRADGSLVHLHISPYPAILHGHVSSSRWQDGLRLCRFVKDQTLWACLAAMAVASKDMSTAEIAYAAIGEIDKVQYINSIKELPSKESRLAHMLLFSGNCQEAETLLLQAGLVYQAIQININLYNWERALELAVKHRTHVDTVLAYRQKFLEDFGKKETNQRFLQYAEGLEVDWNKIKAKIEMEIAKERERAAASAAGRSSVTVQQ
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1639318..1639431,1641730..1641853,1642884..1643056,1643140..1643229,1645166..1645337,1645742..1645889,1646266..1646401,1646814..1646878,1647443..1647606,1648091..1648165,1648735..1648853,1650329..1650508,1653499..1653636,1655349..1655438,1655765..1655874,1659136..1659204,1660998..1661108,1663673..1663894,1664472..1664508))
location: region:1639318-1664508:-1
so has part: feature:1664472-1664508:-1:exon
so has part: feature:1663673-1663894:-1:exon
so has part: feature:1660998-1661108:-1:exon
so has part: feature:1659136-1659204:-1:exon
so has part: feature:1655765-1655874:-1:exon
so has part: feature:1655349-1655438:-1:exon
so has part: feature:1653499-1653636:-1:exon
so has part: feature:1650329-1650508:-1:exon
so has part: feature:1648735-1648853:-1:exon
so has part: feature:1648091-1648165:-1:exon
so has part: feature:1647443-1647606:-1:exon
so has part: feature:1646814-1646878:-1:exon
so has part: feature:1646266-1646401:-1:exon
so has part: feature:1645742-1645889:-1:exon
so has part: feature:1645166-1645337:-1:exon
so has part: feature:1643140-1643229:-1:exon
so has part: feature:1642884-1643056:-1:exon
so has part: feature:1641730-1641853:-1:exon
so has part: feature:1639318-1639431:-1:exon

XP_030809936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1664472-1664508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1663673-1663894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660998-1661108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1659136-1659204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655765-1655874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655349-1655438:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1653499-1653636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1650329-1650508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1648735-1648853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1648091-1648165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1647443-1647606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646814-1646878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646266-1646401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1645742-1645889:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1645166-1645337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1643140-1643229:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1642884-1643056:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1641730-1641853:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1639318-1639431:-1:exon

SMC4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1666376..1694503
location: region:1666376-1694503:1
so has part: feature:1666376-1694503:1:exon
subclass of: SO_0000010

115906696
type: Gene
SIO_000068: ncbigene

position:1666376:1
position: 1666376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694503:1
position: 1694503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666376-1694503:1:exon

SMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMC4
product: structural maintenance of chromosomes 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954071.1
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1666376..1666495,1668739..1668934,1670025..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694503)
location: region:1666376-1694503:1
so has part: feature:1666376-1666495:1:exon
so has part: feature:1668739-1668934:1:exon
so has part: feature:1670025-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666376-1666495:1:exon

position:1666495:1
position: 1666495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1668739-1668934:1:exon

position:1668739:1
position: 1668739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668934:1
position: 1668934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1670025-1670203:1:exon

position:1670025:1
position: 1670025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670203:1
position: 1670203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1670757-1670948:1:exon

position:1670757:1
position: 1670757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670948:1
position: 1670948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1672495-1672671:1:exon

position:1672495:1
position: 1672495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672671:1
position: 1672671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1682461-1682625:1:exon

position:1682461:1
position: 1682461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682625:1
position: 1682625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1683687-1683814:1:exon

position:1683687:1
position: 1683687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683814:1
position: 1683814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1684028-1684168:1:exon

position:1684028:1
position: 1684028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684168:1
position: 1684168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1684884-1685034:1:exon

position:1684884:1
position: 1684884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685034:1
position: 1685034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1685339-1685503:1:exon

position:1685339:1
position: 1685339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685503:1
position: 1685503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1686221-1686454:1:exon

position:1686221:1
position: 1686221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686454:1
position: 1686454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1687022-1687207:1:exon

position:1687022:1
position: 1687022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687207:1
position: 1687207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1687736-1687897:1:exon

position:1687736:1
position: 1687736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687897:1
position: 1687897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1688034-1688259:1:exon

position:1688034:1
position: 1688034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688259:1
position: 1688259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1688357-1688436:1:exon

position:1688357:1
position: 1688357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688436:1
position: 1688436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1689084-1689236:1:exon

position:1689084:1
position: 1689084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689236:1
position: 1689236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1689339-1689465:1:exon

position:1689339:1
position: 1689339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689465:1
position: 1689465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1690098-1690287:1:exon

position:1690098:1
position: 1690098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690287:1
position: 1690287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1690789-1690933:1:exon

position:1690789:1
position: 1690789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690933:1
position: 1690933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1691512-1691685:1:exon

position:1691512:1
position: 1691512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691685:1
position: 1691685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1692138-1692320:1:exon

position:1692138:1
position: 1692138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692320:1
position: 1692320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1692868-1693100:1:exon

position:1692868:1
position: 1692868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693100:1
position: 1693100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1693476-1693659:1:exon

position:1693476:1
position: 1693476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693659:1
position: 1693659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1694212-1694503:1:exon

position:1694212:1
position: 1694212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMC4
product: structural maintenance of chromosomes 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954074.1
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1666376..1666495,1668739..1668934,1670028..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694503)
location: region:1666376-1694503:1
so has part: feature:1666376-1666495:1:exon
so has part: feature:1668739-1668934:1:exon
so has part: feature:1670028-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666376-1666495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668739-1668934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670028-1670203:1:exon

position:1670028:1
position: 1670028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1670757-1670948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1672495-1672671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1682461-1682625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1683687-1683814:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684028-1684168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684884-1685034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1685339-1685503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686221-1686454:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687022-1687207:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1687736-1687897:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688034-1688259:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688357-1688436:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689084-1689236:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689339-1689465:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690098-1690287:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1690789-1690933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1691512-1691685:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1692138-1692320:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1692868-1693100:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1693476-1693659:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1694212-1694503:1:exon

SMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMC4
product: structural maintenance of chromosomes 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030954073.1
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1666403..1666495,1668744..1668934,1670025..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694503)
location: region:1666403-1694503:1
so has part: feature:1666403-1666495:1:exon
so has part: feature:1668744-1668934:1:exon
so has part: feature:1670025-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694503:1:exon

position:1666403:1
position: 1666403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666403-1666495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668744-1668934:1:exon

position:1668744:1
position: 1668744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1670025-1670203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1670757-1670948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1672495-1672671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1682461-1682625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1683687-1683814:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684028-1684168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684884-1685034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1685339-1685503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686221-1686454:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687022-1687207:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1687736-1687897:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688034-1688259:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688357-1688436:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689084-1689236:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689339-1689465:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690098-1690287:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1690789-1690933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1691512-1691685:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1692138-1692320:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1692868-1693100:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1693476-1693659:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1694212-1694503:1:exon

SMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMC4
product: structural maintenance of chromosomes 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030954072.1
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1667664..1668140,1668739..1668934,1670025..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694503)
location: region:1667664-1694503:1
so has part: feature:1667664-1668140:1:exon
so has part: feature:1668739-1668934:1:exon
so has part: feature:1670025-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694503:1:exon

position:1667664:1
position: 1667664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667664-1668140:1:exon

position:1668140:1
position: 1668140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1668739-1668934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670025-1670203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1670757-1670948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1672495-1672671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1682461-1682625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1683687-1683814:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684028-1684168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684884-1685034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1685339-1685503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686221-1686454:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687022-1687207:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1687736-1687897:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688034-1688259:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688357-1688436:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689084-1689236:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689339-1689465:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690098-1690287:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1690789-1690933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1691512-1691685:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1692138-1692320:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1692868-1693100:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1693476-1693659:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1694212-1694503:1:exon

SMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structural maintenance of chromosomes protein 4 isoform X1
translation: MEGEQPTGTVPGKSTKTSTAARGKGREPLEESSMDMEVENEGTREPGKEPPQAASDEVVDNRSLEEILGSIPPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDIPSCSVEVHFQKITDKEGDDYEVIPDSKFCVSRTAYRDNSSTYYINGKKKTFRDVGMLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIRTLCRRVELLNEQRGEKLNRAKLVEKEKDALEEDKNKAIEFLCLENQIFKEKNQMCQYYIHDLKKRINDLEMQKEKINEETKSINEKSSKLAEETKTKNKALKELEKKYNKITKFIEENKEKFTQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSTSAKAIEDTTAKKELLAKAKDKEEAKLRQVLASLQEETKGIQKEKEGKEKELMEFSKEVTESRSNMEIAQSELELYLSKYNSALARLSQAQEALGSTSSTLKERKAAIKDIAGKLPQAEQQLKEKENALEKLGREESGAKDLVRNLRRKVEEAKSSLAQSRSRGKVLEALLQQKKCGNIPGLYGRLGDLGAIDDKYDVAISSSCGALDHIVVDTIDTAQACVNFLKAGGIGVATFIALDKMAVWEKKTQKIPTPENVPRLFDLVKVEDPKVRLAFYFALRDTLVAKNLEEATRIAFQKEKRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVMDISEEEISKMESQLQRDSKRAVQCEEEKSQLEEAIKKLQQDIREMRNTSEKYTASIQGFSEQEIDLKNQIKELEANVTAAAPDKTKQKELEKVLDGYKKDYERVAQKAGKMEEEVKRLHQLIMDTNNQKLKAQQDKIDKIDKEMDECSSAITKAQVAAKTADRNLKKSEEALQRTEKEMEENEKEMKKLTAEMTTLEDKATEVMNECKQAEEALPAVQEEKKNLLQEMKTIQDAEHALQSEALSIKLKIEQIDGHISTHQGKVKYWQKEISKLSLHAIEGEAPEQLRVLSEEELEALQEPDVLSKRIALLEAQQHQLRPNLGAIAEYRRKEELYLKHVEELDNITSERDKFREAFEQLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIYKTQNTTKSVATNPKILALKGLEELGLPACSVAER
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1668778..1668934,1670025..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694400)
location: region:1668778-1694400:1
so has part: feature:1668778-1668934:1:exon
so has part: feature:1670025-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694400:1:exon

XP_030809931.1
type: Protein
SIO_000068: ncbiprotein

position:1668778:1
position: 1668778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694400:1
position: 1694400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668778-1668934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1670025-1670203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670757-1670948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672495-1672671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1682461-1682625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1683687-1683814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1684028-1684168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684884-1685034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1685339-1685503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686221-1686454:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1687022-1687207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687736-1687897:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1688034-1688259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688357-1688436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1689084-1689236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689339-1689465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1690098-1690287:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690789-1690933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1691512-1691685:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1692138-1692320:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1692868-1693100:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1693476-1693659:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1694212-1694400:1:exon

SMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structural maintenance of chromosomes protein 4 isoform X1
translation: MEGEQPTGTVPGKSTKTSTAARGKGREPLEESSMDMEVENEGTREPGKEPPQAASDEVVDNRSLEEILGSIPPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDIPSCSVEVHFQKITDKEGDDYEVIPDSKFCVSRTAYRDNSSTYYINGKKKTFRDVGMLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIRTLCRRVELLNEQRGEKLNRAKLVEKEKDALEEDKNKAIEFLCLENQIFKEKNQMCQYYIHDLKKRINDLEMQKEKINEETKSINEKSSKLAEETKTKNKALKELEKKYNKITKFIEENKEKFTQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSTSAKAIEDTTAKKELLAKAKDKEEAKLRQVLASLQEETKGIQKEKEGKEKELMEFSKEVTESRSNMEIAQSELELYLSKYNSALARLSQAQEALGSTSSTLKERKAAIKDIAGKLPQAEQQLKEKENALEKLGREESGAKDLVRNLRRKVEEAKSSLAQSRSRGKVLEALLQQKKCGNIPGLYGRLGDLGAIDDKYDVAISSSCGALDHIVVDTIDTAQACVNFLKAGGIGVATFIALDKMAVWEKKTQKIPTPENVPRLFDLVKVEDPKVRLAFYFALRDTLVAKNLEEATRIAFQKEKRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVMDISEEEISKMESQLQRDSKRAVQCEEEKSQLEEAIKKLQQDIREMRNTSEKYTASIQGFSEQEIDLKNQIKELEANVTAAAPDKTKQKELEKVLDGYKKDYERVAQKAGKMEEEVKRLHQLIMDTNNQKLKAQQDKIDKIDKEMDECSSAITKAQVAAKTADRNLKKSEEALQRTEKEMEENEKEMKKLTAEMTTLEDKATEVMNECKQAEEALPAVQEEKKNLLQEMKTIQDAEHALQSEALSIKLKIEQIDGHISTHQGKVKYWQKEISKLSLHAIEGEAPEQLRVLSEEELEALQEPDVLSKRIALLEAQQHQLRPNLGAIAEYRRKEELYLKHVEELDNITSERDKFREAFEQLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIYKTQNTTKSVATNPKILALKGLEELGLPACSVAER
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1668778..1668934,1670025..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694400)
location: region:1668778-1694400:1
so has part: feature:1668778-1668934:1:exon
so has part: feature:1670025-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694400:1:exon

XP_030809932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1668778-1668934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1670025-1670203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670757-1670948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672495-1672671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1682461-1682625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1683687-1683814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1684028-1684168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684884-1685034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1685339-1685503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686221-1686454:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1687022-1687207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687736-1687897:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1688034-1688259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688357-1688436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1689084-1689236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689339-1689465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1690098-1690287:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690789-1690933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1691512-1691685:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1692138-1692320:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1692868-1693100:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1693476-1693659:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1694212-1694400:1:exon

SMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structural maintenance of chromosomes protein 4 isoform X1
translation: MEGEQPTGTVPGKSTKTSTAARGKGREPLEESSMDMEVENEGTREPGKEPPQAASDEVVDNRSLEEILGSIPPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDIPSCSVEVHFQKITDKEGDDYEVIPDSKFCVSRTAYRDNSSTYYINGKKKTFRDVGMLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIRTLCRRVELLNEQRGEKLNRAKLVEKEKDALEEDKNKAIEFLCLENQIFKEKNQMCQYYIHDLKKRINDLEMQKEKINEETKSINEKSSKLAEETKTKNKALKELEKKYNKITKFIEENKEKFTQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSTSAKAIEDTTAKKELLAKAKDKEEAKLRQVLASLQEETKGIQKEKEGKEKELMEFSKEVTESRSNMEIAQSELELYLSKYNSALARLSQAQEALGSTSSTLKERKAAIKDIAGKLPQAEQQLKEKENALEKLGREESGAKDLVRNLRRKVEEAKSSLAQSRSRGKVLEALLQQKKCGNIPGLYGRLGDLGAIDDKYDVAISSSCGALDHIVVDTIDTAQACVNFLKAGGIGVATFIALDKMAVWEKKTQKIPTPENVPRLFDLVKVEDPKVRLAFYFALRDTLVAKNLEEATRIAFQKEKRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVMDISEEEISKMESQLQRDSKRAVQCEEEKSQLEEAIKKLQQDIREMRNTSEKYTASIQGFSEQEIDLKNQIKELEANVTAAAPDKTKQKELEKVLDGYKKDYERVAQKAGKMEEEVKRLHQLIMDTNNQKLKAQQDKIDKIDKEMDECSSAITKAQVAAKTADRNLKKSEEALQRTEKEMEENEKEMKKLTAEMTTLEDKATEVMNECKQAEEALPAVQEEKKNLLQEMKTIQDAEHALQSEALSIKLKIEQIDGHISTHQGKVKYWQKEISKLSLHAIEGEAPEQLRVLSEEELEALQEPDVLSKRIALLEAQQHQLRPNLGAIAEYRRKEELYLKHVEELDNITSERDKFREAFEQLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIYKTQNTTKSVATNPKILALKGLEELGLPACSVAER
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1668778..1668934,1670025..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694400)
location: region:1668778-1694400:1
so has part: feature:1668778-1668934:1:exon
so has part: feature:1670025-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694400:1:exon

XP_030809933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1668778-1668934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1670025-1670203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670757-1670948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672495-1672671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1682461-1682625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1683687-1683814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1684028-1684168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684884-1685034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1685339-1685503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686221-1686454:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1687022-1687207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687736-1687897:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1688034-1688259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688357-1688436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1689084-1689236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689339-1689465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1690098-1690287:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690789-1690933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1691512-1691685:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1692138-1692320:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1692868-1693100:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1693476-1693659:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1694212-1694400:1:exon

SMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structural maintenance of chromosomes protein 4 isoform X2
translation: MEGEQPTGTVPGKSTKTSTAARGKGREPLEESSMDMEVENEGTREPGKEPPQASDEVVDNRSLEEILGSIPPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDIPSCSVEVHFQKITDKEGDDYEVIPDSKFCVSRTAYRDNSSTYYINGKKKTFRDVGMLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIRTLCRRVELLNEQRGEKLNRAKLVEKEKDALEEDKNKAIEFLCLENQIFKEKNQMCQYYIHDLKKRINDLEMQKEKINEETKSINEKSSKLAEETKTKNKALKELEKKYNKITKFIEENKEKFTQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSTSAKAIEDTTAKKELLAKAKDKEEAKLRQVLASLQEETKGIQKEKEGKEKELMEFSKEVTESRSNMEIAQSELELYLSKYNSALARLSQAQEALGSTSSTLKERKAAIKDIAGKLPQAEQQLKEKENALEKLGREESGAKDLVRNLRRKVEEAKSSLAQSRSRGKVLEALLQQKKCGNIPGLYGRLGDLGAIDDKYDVAISSSCGALDHIVVDTIDTAQACVNFLKAGGIGVATFIALDKMAVWEKKTQKIPTPENVPRLFDLVKVEDPKVRLAFYFALRDTLVAKNLEEATRIAFQKEKRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVMDISEEEISKMESQLQRDSKRAVQCEEEKSQLEEAIKKLQQDIREMRNTSEKYTASIQGFSEQEIDLKNQIKELEANVTAAAPDKTKQKELEKVLDGYKKDYERVAQKAGKMEEEVKRLHQLIMDTNNQKLKAQQDKIDKIDKEMDECSSAITKAQVAAKTADRNLKKSEEALQRTEKEMEENEKEMKKLTAEMTTLEDKATEVMNECKQAEEALPAVQEEKKNLLQEMKTIQDAEHALQSEALSIKLKIEQIDGHISTHQGKVKYWQKEISKLSLHAIEGEAPEQLRVLSEEELEALQEPDVLSKRIALLEAQQHQLRPNLGAIAEYRRKEELYLKHVEELDNITSERDKFREAFEQLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIYKTQNTTKSVATNPKILALKGLEELGLPACSVAER
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1668778..1668934,1670028..1670203,1670757..1670948,1672495..1672671,1682461..1682625,1683687..1683814,1684028..1684168,1684884..1685034,1685339..1685503,1686221..1686454,1687022..1687207,1687736..1687897,1688034..1688259,1688357..1688436,1689084..1689236,1689339..1689465,1690098..1690287,1690789..1690933,1691512..1691685,1692138..1692320,1692868..1693100,1693476..1693659,1694212..1694400)
location: region:1668778-1694400:1
so has part: feature:1668778-1668934:1:exon
so has part: feature:1670028-1670203:1:exon
so has part: feature:1670757-1670948:1:exon
so has part: feature:1672495-1672671:1:exon
so has part: feature:1682461-1682625:1:exon
so has part: feature:1683687-1683814:1:exon
so has part: feature:1684028-1684168:1:exon
so has part: feature:1684884-1685034:1:exon
so has part: feature:1685339-1685503:1:exon
so has part: feature:1686221-1686454:1:exon
so has part: feature:1687022-1687207:1:exon
so has part: feature:1687736-1687897:1:exon
so has part: feature:1688034-1688259:1:exon
so has part: feature:1688357-1688436:1:exon
so has part: feature:1689084-1689236:1:exon
so has part: feature:1689339-1689465:1:exon
so has part: feature:1690098-1690287:1:exon
so has part: feature:1690789-1690933:1:exon
so has part: feature:1691512-1691685:1:exon
so has part: feature:1692138-1692320:1:exon
so has part: feature:1692868-1693100:1:exon
so has part: feature:1693476-1693659:1:exon
so has part: feature:1694212-1694400:1:exon

XP_030809934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1668778-1668934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1670028-1670203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670757-1670948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672495-1672671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1682461-1682625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1683687-1683814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1684028-1684168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684884-1685034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1685339-1685503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686221-1686454:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1687022-1687207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687736-1687897:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1688034-1688259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688357-1688436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1689084-1689236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689339-1689465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1690098-1690287:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690789-1690933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1691512-1691685:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1692138-1692320:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1692868-1693100:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1693476-1693659:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1694212-1694400:1:exon

LOC115907014
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1692043..>1697123)
location: region:1692043-1697123:-1
so has part: feature:1692043-1697123:-1:exon
subclass of: SO_0000010

115907014
type: Gene
SIO_000068: ncbigene

position:1692043:-1
position: 1692043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697123:-1
position: 1697123
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692043-1697123:-1:exon

LOC115907014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907014
product: uncharacterized LOC115907014
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954634.1
SIO_010081: LOC115907014
subclass of: SO_0000673
so part of: LOC115907014
location: complement(join(1692043..1695627,1696437..>1697123))
location: region:1692043-1697123:-1
so has part: feature:1696437-1697123:-1:exon
so has part: feature:1692043-1695627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1696437-1697123:-1:exon

position:1696437:-1
position: 1696437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1692043-1695627:-1:exon

position:1695627:-1
position: 1695627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115907014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907014
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC115907014
translation: GSGPVSVLPRSGVSSALPSPEPRSDSCRWHRGTFPLSSAIAAPQTALLPAEGGTLRARPFPQFRRCSPSLSSARSRPRSRHCHLRAVAVTERGGESGSIAEQRSPEWFHRGEEGHGAAPSPGGAPRSGSIARRSSREGAEGPRQPEGPGPVSAALPGHRGVGAAFLVFQLVAVAVTRRVQAWIPLAVIRRFRVWIPLPAHRCPCPELPGTARAVLLALAPLPGLCGTEQGERGAVLQHFKDLGGTLEHKKAVLLSVLDELDSHISEKYHPLMEEVEILKLGVSELKELHPALQKEESLLLFLEKMNELQXVAPPGPVEIHAGMEKVLQDTWSATEIGQVHRIHTPELHLAHNSNSSICTLGCCY
SIO_010081: LOC115907014
subclass of: SO_0000673
so part of: LOC115907014
location: complement(join(1695220..1695627,1696437..>1697123))
location: region:1695220-1697123:-1
so has part: feature:1696437-1697123:-1:exon
so has part: feature:1695220-1695627:-1:exon

XP_030810494.1
type: Protein
SIO_000068: ncbiprotein

position:1695220:-1
position: 1695220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1696437-1697123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1695220-1695627:-1:exon

KPNA4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KPNA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1699800..1721084)
location: region:1699800-1721084:-1
so has part: feature:1699800-1721084:-1:exon
subclass of: SO_0000010

115906701
type: Gene
SIO_000068: ncbigene

position:1699800:-1
position: 1699800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721084:-1
position: 1721084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1699800-1721084:-1:exon

KPNA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KPNA4
product: karyopherin subunit alpha 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 51 ESTs, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954082.1
SIO_010081: KPNA4
subclass of: SO_0000673
so part of: KPNA4
location: complement(join(1699800..1701714,1702679..1702773,1703488..1703650,1704236..1704307,1705105..1705209,1706517..1706645,1706828..1706959,1708852..1708896,1708986..1709155,1710509..1710595,1712213..1712298,1712381..1712476,1713172..1713224,1713304..1713333,1713421..1713510,1714102..1714146,1720905..1721084))
location: region:1699800-1721084:-1
so has part: feature:1720905-1721084:-1:exon
so has part: feature:1714102-1714146:-1:exon
so has part: feature:1713421-1713510:-1:exon
so has part: feature:1713304-1713333:-1:exon
so has part: feature:1713172-1713224:-1:exon
so has part: feature:1712381-1712476:-1:exon
so has part: feature:1712213-1712298:-1:exon
so has part: feature:1710509-1710595:-1:exon
so has part: feature:1708986-1709155:-1:exon
so has part: feature:1708852-1708896:-1:exon
so has part: feature:1706828-1706959:-1:exon
so has part: feature:1706517-1706645:-1:exon
so has part: feature:1705105-1705209:-1:exon
so has part: feature:1704236-1704307:-1:exon
so has part: feature:1703488-1703650:-1:exon
so has part: feature:1702679-1702773:-1:exon
so has part: feature:1699800-1701714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1720905-1721084:-1:exon

position:1720905:-1
position: 1720905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1714102-1714146:-1:exon

position:1714102:-1
position: 1714102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714146:-1
position: 1714146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1713421-1713510:-1:exon