Ogataea parapolymorpha DL-1 chromosome IV, whole genome shotgun sequence.
Ogataea parapolymorpha DL-1 (Hansenula polymorpha DL-1)
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea.
Genome sequence of the methylotrophic yeast Hansenula polymorpha DL1
Submitted (14-SEP-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (25-OCT-2013) Lab of Molecular Cloning, Centre 'Bioengineering' RAS, Prosp. 60-let Oktyabrya, bld. 7-1, Moscow 117312, Russia
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM002303.\nSource DNA available from Prof. O.A. Dontsova, Moscow State\nUniversity, Moscow, Russia.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.0\nAssembly Name :: Hansenula_2\nGenome Coverage :: 49.0x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##
Fungal transcriptional regulatory protein
Salicylate hydroxylase (Salicylate 1-monooxygenase)
Universal stress protein A family protein
Mitochondrial import inner membrane translocase subunit TIM22
Abundant subunit of the nuclear pore complex (NPC)
U3 small nucleolar RNA-associated protein
Adenylyltransferase and sulfurtransferase UBA4
U3 snoRNP protein involved in maturation of pre-18S rRNA
putative ribosomal RNA processing protein (10)
ubiquitin carboxyl-terminal hydrolase 25/28
Vacuolar protein sorting-associated protein 74
Mitochondrial respiratory chain complexes assembly protein AFG3
checkpoint serine/threonine-protein kinase
Vacuolar protein sorting-associated protein 27
Mitochondrial 3-hydroxyacyl-thioester dehydratase involved in fatty acid biosynthesis
Karyopherin involved in nuclear import and export
Protein integral to the mitochondrial membrane
Glycosylphosphatidylinositol anchor biosynthesis protein 11
Beta subunit of the CAAX farnesyltransferase (FTase)
Diacetyl reductase [(R)-acetoin forming]
Transport protein particle (TRAPP) complex subunit
N-terminal acetyltransferase complex ARD1 subunit (Arrest-defective protein 1)
Vacuolar protein sorting-associated protein 29
putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase
Serine/threonine-protein phosphatase 2A activator 2
RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB1
Mitochondrial inner membrane protein required for assembly of the cytochrome c oxidase complex
putative succinate-semialdehyde dehydrogenase
Cytosolic Fe-S cluster assembly factor CFD1
flavin-containing monooxygenase FMO GS-OX
putative phosphomethylpyrimidine kinase 2
SSF2 high copy suppressor of G beta subunit temperature sensitive mutation
Pre-mRNA-splicing ATP-dependent RNA helicase prp28
Mitochondrial import inner membrane translocase subunit TIM10
Cytochrome c1 heme lyase, involved in maturation of cytochrome c1
60S ribosomal protein L44, mitochondrial
Mitochondrial methionyl-tRNA synthetase (MetRS)
DNA polymerase III (delta) subunit, essential for cell viability
Eukaryotic translation initiation factor 5A-2
Small subunit of the clathrin-associated adaptor complex AP-2
Ubiquitin-specific protease that deubiquitinates ubiquitin-protein moieties
Signal recognition particle subunit SRP54
Protein component of the H/ACA snoRNP pseudouridylase complex
geranylgeranyl transferase type-1 subunit beta
Protein of unknown function, copurifies with late Golgi vesicles containing the v-SNARE Tlg2p
Ribonucleoside-diphosphate reductase small chain 1
putative serine/threonine-protein kinase
54S ribosomal protein L17, mitochondrial
Chromatin structure-remodeling complex protein RSC58
Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP
Protein involved in the inositol acylation of glucosaminyl phosphatidylinositol (GlcN-PI)
V-type proton ATPase catalytic subunit A
Serine/threonine-protein phosphatase PP1-1
Succinate-semialdehyde dehydrogenase [NADP(+)]
Alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Subunit of the RNA polymerase II mediator complex
ER localized, heme-binding peroxidase involved in the degradation of heme
Serine/threonine protein phosphatase Z, isoform of Ppz2p
class E vacuolar-protein sorting and endocytosis factor
54S ribosomal protein L36, mitochondrial
JmjC domain family histone demethylase specific for H3-K36
Subunit of the eukaryotic translation initiation factor 3 (eIF3)
U3 small nucleolar ribonucleoprotein IMP4
Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex
Protein transport protein SEC61 subunit alpha
Protein involved in negative regulation of transcription of iron regulon
Specialized J-protein that functions with Hsp70 in Fe-S cluster biogenesis in mitochondria
Nucleolar pre-ribosomal-associated protein 1
U6 snRNA-associated Sm-like protein LSm5
mitochondrial 37S ribosomal protein MRPS28
Glycerol-3-phosphate dehydrogenase [NAD(+)]
Presequence translocase-associated motor subunit
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61
putative mannosyltransferase involved in protein glycosylation
WD repeat protein required for ubiquitin-mediated protein degradation
Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex)
40S ribosomal protein MRP2, mitochondrial
NEDD8-activating enzyme E1 regulatory subunit
Bud-specific protein with a potential role in membrane trafficking
MOSC domain-containing protein 1, mitochondrial
putative membrane protein of unknown function involved in Mn2+ homeostasis
NADH-ubiquinone oxidoreductase subunit, mitochondrial
Actin cytoskeleton-regulatory complex protein END3
Vacuolar ATPase assembly integral membrane protein VPH2
pH-response transcription factor pacC/RIM101
Cell wall integrity and stress response component 4
Ran (Ras-related nuclear protein) /TC4 subfamily of small GTPases
Heme-binding protein involved in regulation of cytochrome P450 protein Erg11p
1-phosphatidylinositol phosphodiesterase
Translation initiation factor eIF-2B subunit beta
Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
Inorganic pyrophosphatase, mitochondrial
Glycerol-3-phosphate O-acyltransferase 1
Phosphatidylinositol-3-phosphate-binding protein 2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3
ABC transporter ATP-binding protein ARB1
Transcriptional regulatory protein SAP30
Protein involved in ER-to-Golgi transport
Mitochondrial DNA replication protein YHM2
omega-6 fatty acid desaturase (delta-12 desaturase)
putative vesicle-mediated transport protein Vid24
Sporulation-specific mitogen-activated protein kinase SMK1
Myristoylated serine/threonine protein kinase involved in vacuolar protein sorting
putative aldehyde dehydrogenase-like protein
Dynein heavy chain, cytoplasmic, cytosolic
Type II phosphatidylinositol 4-kinase that binds Las17p
mitochondrial import inner membrane translocase subunit TIM23
Permeases of the drug/metabolite transporter (DMT) superfamily
Essential protein involved in the TOR signaling pathway
Regulatory subunit of trehalose-6-phosphate synthase/phosphatase complex
Chromatin modification-related protein EAF6
putative purine nucleoside phosphorylase
One of three possible beta-subunits of the Snf1 kinase complex
Isocitrate dehydrogenase [NADP], mitochondrial
Trimethyl guanosine synthase, conserved nucleolar methyl transferase
Protein kinase implicated in activation of the plasma membrane H(+)-ATPase Pma1p
eukaryotic translation initiation factor 3
Triacylglycerol lipase involved in triacylglycerol mobilization and degradation
Coronin, cortical actin cytoskeletal component
U3 small nucleolar RNA-associated protein 4
synovial apoptosis inhibitor 1, synoviolin
kynurenine--oxoglutarate transaminase BNA3
RNA binding protein that negatively regulates growth rate
4-hydroxybenzoate polyprenyltransferase, mitochondrial
Nuclear pore protein involved in nuclear export of pre-tRNA
54S ribosomal protein L27, mitochondrial
DNA-directed RNA polymerase I subunit A12
Integral inner mitochondrial membrane protein
Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate
putative sterigmatocystin biosynthesis protein stcT
Mitochondrial iron transporter of the mitochondrial carrier family (MCF)
Peptide-N4-(N-acetyl-beta- glucosaminyl)asparagine amidase A
GPI inositol deacylase of the ER that negatively regulates COPII vesicle formation
Mitochondrial distribution and morphology protein 35
CCR4-NOT complex associated factor Caf16p
Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SAL
Carnitine O-acetyltransferase, mitochondrial
Vacuolar membrane protein that transits through the biosynthetic vacuolar protein sorting pathway
Elongation factor 2 (EF-2), also encoded by EFT1
Diadenosine 5',5''-P1,P4-tetraphosphate phosphorylase II (AP4A phosphorylase)
Mitochondrial outer membrane protein IML2
putative mitochondrial dynamin GTPase (Msp1)
Mediator of RNA polymerase II transcription subunit 22
tRNA (uracil(54)-C(5))-methyltransferase
Long-chain base-1-phosphate phosphatase with specificity for dihydrosphingosine-1-phosphate
LETM1 domain-containing protein YLH47, mitochondrial
Deoxyuridine 5'-triphosphate nucleotidohydrolase
Nitrogen catabolite repression transcriptional regulator
Inositol phosphorylceramide synthase catalytic subunit AUR1
Dihydrolipoamide dehydrogenase (E3)-binding protein (E3BP)
Protein involved in the nuclear export of pre-ribosomes
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial
Transcription initiation factor TFIID subunit 14
Guanine nucleotide-binding protein subunit beta
Mitochondrial import inner membrane translocase subunit TIM13
Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair
Maintenance of mitochondrial morphology protein 1
TFIIF (Transcription Factor II) largest subunit
flavonol synthase/flavanone 3-hydroxylase