Ogataea parapolymorpha DL-1 chromosome VII, whole genome shotgun sequence.
Ogataea parapolymorpha DL-1 (Hansenula polymorpha DL-1)
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea.
Genome sequence of the methylotrophic yeast Hansenula polymorpha DL1
Submitted (14-SEP-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (25-OCT-2013) Lab of Molecular Cloning, Centre 'Bioengineering' RAS, Prosp. 60-let Oktyabrya, bld. 7-1, Moscow 117312, Russia
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM002306.\nSource DNA available from Prof. O.A. Dontsova, Moscow State\nUniversity, Moscow, Russia.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.0\nAssembly Name :: Hansenula_2\nGenome Coverage :: 49.0x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##
Glycine/D-amino acid oxidases (deaminating)
D-aninoacid oxidase, FAD dependent oxidoreductase
mitotic spindle checkpoint component mad2
Alpha subunit of Type II geranylgeranyltransferase
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
DNA-directed RNA polymerase III subunit RPC8
RNA polymerase II transcription factor B subunit 3
L-aminoadipate-semialdehyde dehydrogenase large subunit
Regulation of nuclear pre-mRNA domain-containing protein 2
Histidine biosynthesis trifunctional protein
putative mitochondrial outer membrane protein
ADP-ribosylation factor GTPase-activating protein GLO3
subunit of ER protein- translocation complex
Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine
Superoxide dismutase [Mn], mitochondrial
putative aldehyde dehydrogenase-like protein
putative mitochondrial transport protein
Serine/threonine kinase and DNA damage checkpoint effector
Subunit of a complex with Rad50p and Xrs2p (MRX complex)
Protein involved in the regulation of cell wall synthesis
Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex
Vacuolar protein sorting-associated protein 53
Acetolactate synthase catalytic subunit, mitochondrial
54S ribosomal protein L35, mitochondrial
DNA polymerase epsilon catalytic subunit A
U3 small nucleolar RNA-associated protein MPP10
Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A
member of the Gal4p family of zinc cluster proteins
Asparagine-rich zinc finger protein AZF1
DNA-directed RNA polymerase III subunit C19
Carboxypeptidase Y inhibitor, function requires acetylation by the NatB N-terminal acetyltransferase
Transcription factor of the Forkhead/HNF3 family
KIN2 Serine/threonine protein kinase involved in regulation of exocytosis
26S proteasome non-ATPase regulatory subunit 8
SH3 domain protein implicated in the regulation of actin polymerization
ABC transporter ATP-binding protein/permease PDR18
Ubiquinone biosynthesis monooxygenase COQ6
Subunit of the anaphase-promoting complex/cyclosome (APC/C)
translation initiation factor eIF-3 subunit 10
Cell wall protein that contains a putative GPI-attachment site
type-III integral membrane protein of unknown function
Vacuolar membrane-associated protein IML1
putative mannosyltransferase involved in protein glycosylation
ATP synthase subunit alpha, mitochondrial
Cyclin associated with protein kinase Kin28p
DNA-directed RNA polymerase III subunit C4
Component of the small (ribosomal) subunit (SSU) processosome required for pre-18S rRNa processing
Protein involved in nutritional control of the cell cycle
Biotin:apoprotein ligase, covalently modifies proteins with the addition of biotin
DNA-directed RNA polymerase II subunit RPB1
component of the COPII coat of ER-Golgi vesicles
putative phospholipid-transporting ATPase
Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC)
Cytochrome c1, heme protein, mitochondrial
protein disulfide isomerase family A, member 6
N-(5'-phosphoribosyl)anthranilate isomerase
Repressor of RNA polymerase III transcription MAF1
D-arabinose dehydrogenase [NAD(P)+] heavy chain
C-1-tetrahydrofolate synthase, mitochondrial
Protein required for transport of flavin adenine dinucleotide (FAD)
Polyphosphatidylinositol phosphatase INP53
Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p
Mitochondrial tRNA-specific 2-thiouridylase 1
eukaryotic translation initiation factor 5
F-box protein component of the SCF ubiquitin-ligase complex
Flavin-linked sulfhydryl oxidase localized to the endoplasmic reticulum lumen
Protein that interacts physically and genetically with Tap42p, which regulates protein phosphatase 2
Vacuolar import and degradation protein 27
Mediator of RNA polymerase II transcription subunit 5
putative HTH La-type RNA-binding protein
Inorganic phosphate transport protein PHO88
Molybdenum cofactor biosynthesis protein 1
Molybdenum cofactor biosynthesis protein
Glucose-insensitive transcription protein 7
Inositol polyphosphate multikinase (IPMK)
Hydroxyacylglutathione hydrolase, cytoplasmic isozyme
Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity
Transcription initiation factor TFIID subunit 6
Protein phosphatase PP2A regulatory subunit A
Mannose 6-phosphate receptor-like protein 1
Nucleotide excision repair factor NEF2, RAD4/CUT5 component
Ribosomal RNA methyltransferase MRM2, mitochondrial
putative GTPase involved in 60S ribosomal subunit biogenesis
Transcription initiation factor TFIID, subunit TAF1
DNA polymerase alpha-associated DNA helicase A
Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4
electron transfer flavoprotein subunit alpha, mitochondrial
Chromatin structure-remodeling complex subunit RSC1
V-type proton ATPase proteolipid subunit
GEF1 Chloride channel localized to late- or post-Golgi vesicles involved in iron metabolism
Cytochrome b-c1 complex subunit Rieske, mitochondrial
Nucleolar pre-ribosomal-associated protein 2
Component of the TOM (translocase of outer membrane) complex
NADH-ubiquinone oxidoreductase subunit, mitochondrial
Multistep regulator of cAMP-PKA signaling
Mitochondrial respiratory chain complexes assembly protein YTA12
Vacuolar protein sorting-associated protein 1
Subunit of the RNA polymerase II mediator complex
Asparagine synthetase [glutamine-hydrolyzing] 1
Ser-Thr protein kinase, member (with Ark1p and Prk1p) of the Ark kinase family
Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p)
NADPH-dependent alpha-keto amide reductase
External NADH-ubiquinone oxidoreductase 1, mitochondrial
RRP14 Required for normal pre-rRNA Processing, Protein required for cell viability
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
Arginine/alanine aminopeptidase, overproduction stimulates glycogen accumulation
UBX (ubiquitin regulatory X) domain-containing protein
Small subunit of the clathrin-associated adaptor complex AP-1
Mediator of RNA polymerase II transcription subunit 8
Essential protein possibly involved in secretion
putative low-temperature viability protein
D-lactate dehydrogenase [cytochrome] 2, mitochondrial
CDP-diacylglycerol--serineO- phosphatidyltransferase
Mitochondrial inner membrane protein required for assembly of cytochrome c oxidase (complex IV)
One of five related septins (Cdc3p, Cdc10p, Cdc11p, Cdc12p, Shs1p)
Serine/threonine-protein phosphatase 4 regulatory subunit 3
Peroxisomal 2,4-dienoyl-CoA reductase SPS19
Protein involved in bud site selection during bipolar budding
Carbamoyl-phosphate synthase arginine-specific large chain
Guanine nucleotide-binding protein alpha-3 subunit
Ketol-acid reductoisomerase, mitochondrial
Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase
oligosaccharyltransferase complex subunit epsilon
putative tyrosine-protein phosphatase OCA1
Vacuolar transporter, exports large neutral amino acids from the vacuole
DNA polymerase alpha catalytic subunit A
Choline/ethanolaminephosphotransferase 1
Mitochondrial import receptor subunit TOM22
H/ACA ribonucleoprotein complex non-core subunit NAF1
DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA
phosphatidylinositol 4-phosphate 5-kinase MSS4
Single-strand telomeric DNA-binding protein GBP2
histone-lysine N-methyltransferase SETD1
NADH dehydrogenase (ubiquinone) Fe-S protein 4
putative transcription factor containing a zinc finger
Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p
Vacuolar import and degradation protein 30
Nicotinamide/nicotinate mononucleotide adenylyltransferase
Branched-chain-amino-acid aminotransferase, mitochondrial
Ras-related C3 botulinum toxin substrate 1
Histone acetyltransferase type B subunit 2
54S ribosomal protein IMG1, mitochondrial
Acyl-CoA:sterol acyltransferase, isozyme of Are1p
Mitochondrial inner membrane protease ATP23
Eukaryotic translation initiation factor 3 subunit G
Vacuolar membrane protein involved in vacuolar polyphosphate accumulation
DNA-directed RNA polymerase I subunit RPA2
37S ribosomal protein S16, mitochondrial
mannan polymerase II complex ANP1 subunit
Equilibrative nucleoside transporter protein
Pentatricopeptide repeat-containing protein PET309, mitochondrial
Dehydrodolichyl diphosphate synthase SRT1
Phosphoribosylformylglycinamidine synthase
MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway
Dipeptidyl aminopeptidase, Golgi integral membrane protein
DNA-directed RNA polymerase II subunit H
Phosphatidylinositol transfer protein PDR16
Membrane protein involved in Golgi transport
threonine dehydrogenase/Zn-dependent dehydrogenase-like protein
putative mitochondrial integral membrane protein
Translation initiation factor eIF-2B subunit alpha
Ribosome-releasing factor 2, mitochondrial
Protein kinase involved in the response to oxidative and osmotic stress
Nuclear polyadenylated RNA-binding protein 3
Mitochondrial protein involved in protein import into the mitochondrial matrix
Cyclin-dependent kinases regulatory subunit
TFIID subunit, involved in RNA polymerase II transcription initiation
Polyadenylate-binding protein, cytoplasmic and nuclear
Protein involved in iron metabolism in mitochondria
Mediator of RNA polymerase II transcription subunit 16
Ubiquitin-specific protease that may play a role in ubiquitin precursor processing
Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p)
Mitochondrial ribosomal protein of the small subunit
Tethering factor for nuclear proteasome STS1
Catalytic subunit of DNA polymerase zeta, which is involved in DNA repair and translesion synthesis
Succinate dehydrogenase assembly factor 2, mitochondrial
Constituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p
Nucleolar protein, forms a complex with Noc4p
putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
Transcription initiation factor TFIID subunit 8
GPI ethanolamine phosphate transferase 1
Subunit of both RNase MRP and nuclear RNase P
CDP-diacylglycerol--inositol 3-phosphatidyltransferase
General transcriptional co-repressor, acts together with Tup1p
TATA-binding protein-associated factor MOT1
Polyamine oxidase, converts spermine to spermidine
Mitochondrial ATP-binding protein, possibly a mitochondrial chaperone with non-proteolytic function
Protein required for beta-1,6 glucan biosynthesis
U3 small nucleolar RNA-associated protein 15
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
Beta-glucan synthesis-associated protein KRE6
member of a family of enoyl-CoA hydratase/isomerases
DDK (Dbf4-dependent kinase) catalytic subunit
Endoplasmic reticulum vesicle protein 25
Mediator of RNA polymerase II transcription subunit 13
putative glutamine amidotransferase-like protein