Caballeronia zhejiangensis strain A33_M4_a plasmid p2, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Caballeronia.
Prevalence and functional effects of a genomic island for insect symbiosis within Burkholderiaceae
Submitted (22-SEP-2021) Biology Department, University of Texas at Arlington, 501 S. Nedderman Dr., Arlington, TX 76019, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP084288.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2020\nAssembly Method :: SPAdes v. 3.13.0; Unicycler v. 2.4.8-beta\nAssembly Name :: A33_M4_a\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/27/2023 07:38:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,968\nCDSs (total) :: 6,881\nGenes (coding) :: 6,744\nCDSs (with protein) :: 6,744\nGenes (RNA) :: 87\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 65\nncRNAs :: 4\nPseudo Genes (total) :: 137\nCDSs (without protein) :: 137\nPseudo Genes (ambiguous residues) :: 0 of 137\nPseudo Genes (frameshifted) :: 49 of 137\nPseudo Genes (incomplete) :: 101 of 137\nPseudo Genes (internal stop) :: 15 of 137\nPseudo Genes (multiple problems) :: 25 of 137\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_008345419.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007742159.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018435874.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018435873.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018435872.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008345411.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011493346.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018435878.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016347213.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347214.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016347215.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006754629.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345403.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584352.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007742061.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007182669.1
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008345399.1
COORDINATES: similar to AA sequence:RefSeq:WP_013698920.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250501.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341820.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345394.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250498.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052074.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007584280.1
COORDINATES: similar to AA sequence:RefSeq:WP_008494428.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_020070906.1
COORDINATES: similar to AA sequence:RefSeq:WP_008353371.1
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
flagellar transcriptional regulator FlhD
COORDINATES: similar to AA sequence:RefSeq:WP_017775414.1
flagellar transcriptional regulator FlhC
COORDINATES: protein motif:HMM:NF023304.2
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0042546 - cell wall biogenesis [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011551918.1
COORDINATES: protein motif:HMM:NF012337.2
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: protein motif:HMM:NF021456.2
COORDINATES: protein motif:HMM:TIGR02270.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012745700.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194080.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194081.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194082.1
COORDINATES: similar to AA sequence:RefSeq:WP_014530380.1
COORDINATES: similar to AA sequence:RefSeq:WP_006471747.1
taurine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017235498.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015411 - ABC-type taurine transporter transporter activity [Evidence IEA]; GO:0030977 - taurine binding [Evidence IEA]
GO:0015734 - taurine transport [Evidence IEA]
taurine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007742969.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013689480.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774088.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017777470.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774178.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404496.1
COORDINATES: similar to AA sequence:RefSeq:WP_018434951.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422255.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345364.1
carbamoyltransferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012404492.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341535.1
COORDINATES: similar to AA sequence:RefSeq:WP_020068323.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774167.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973098.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018422230.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193789.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691327.1
COORDINATES: similar to AA sequence:RefSeq:WP_013435259.1
GO:0009279 - cell outer membrane [Evidence IEA]
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006999951.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920165.1
COORDINATES: similar to AA sequence:RefSeq:WP_009044257.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345350.1
COORDINATES: similar to AA sequence:RefSeq:WP_018268267.1
COORDINATES: similar to AA sequence:RefSeq:WP_012363305.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014251856.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF020090.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014251861.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018422692.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006028959.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014193029.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014193028.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012426578.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094282.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012404795.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253255.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347351.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347352.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347353.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345333.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347355.1
COORDINATES: similar to AA sequence:RefSeq:WP_014900442.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016347357.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008343233.1
GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016346935.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919038.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345326.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699307.1
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016347173.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070856.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047669.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013088404.1
GO:0006865 - amino acid transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016347169.1
COORDINATES: similar to AA sequence:RefSeq:WP_013088402.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016347014.1
COORDINATES: similar to AA sequence:RefSeq:WP_014897046.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194078.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345315.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013094417.1
COORDINATES: similar to AA sequence:RefSeq:WP_012367235.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014193667.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194073.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_007742662.1
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_016347160.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016347393.1
GO:0016787 - hydrolase activity [Evidence IEA]
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012402455.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252875.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046641.1
COORDINATES: protein motif:HMM:NF025663.2
ATP-grasp fold amidoligase family protein
COORDINATES: protein motif:HMM:NF013502.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006759807.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423979.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345892.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092801.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092802.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345887.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405077.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014194090.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347399.1
COORDINATES: similar to AA sequence:RefSeq:WP_019661600.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067786.1
COORDINATES: similar to AA sequence:RefSeq:WP_016348351.1
COORDINATES: similar to AA sequence:RefSeq:WP_010090131.1
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
2-methylaconitate cis-trans isomerase PrpF
COORDINATES: similar to AA sequence:RefSeq:WP_020201628.1
GO:0047456 - 2-methylisocitrate dehydratase activity [Evidence IEA]
Fe/S-dependent 2-methylisocitrate dehydratase AcnD
COORDINATES: similar to AA sequence:RefSeq:WP_008345871.1
GO:0050440 - 2-methylcitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345869.1
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007176478.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
propionate catabolism operon regulatory protein PrpR
COORDINATES: similar to AA sequence:RefSeq:WP_013587945.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400438.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050994.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741897.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345860.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008919790.1
COORDINATES: similar to AA sequence:RefSeq:WP_008963758.1
aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008919788.1
COORDINATES: similar to AA sequence:RefSeq:WP_007590210.1
aromatic/alkene monooxygenase hydroxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008919786.1
COORDINATES: similar to AA sequence:RefSeq:WP_006206780.1
COORDINATES: similar to AA sequence:RefSeq:WP_011812092.1
COORDINATES: similar to AA sequence:RefSeq:WP_011812091.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741931.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014250457.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491759.1
COORDINATES: protein motif:HMM:NF020918.2
COORDINATES: similar to AA sequence:RefSeq:WP_018098581.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498988.1
COORDINATES: similar to AA sequence:RefSeq:WP_014251941.1
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system Vgr family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004633909.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013316176.1
COORDINATES: similar to AA sequence:RefSeq:WP_017423104.1
COORDINATES: similar to AA sequence:RefSeq:WP_013577896.1
type VI secretion system tube protein TssD
COORDINATES: similar to AA sequence:RefSeq:WP_018433201.1
GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013093743.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920460.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012492992.1
secretin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014191492.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013089031.1
cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
COORDINATES: similar to AA sequence:RefSeq:WP_006028956.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
cellulose synthase complex periplasmic endoglucanase BcsZ
COORDINATES: similar to AA sequence:RefSeq:WP_008345799.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0030244 - cellulose biosynthetic process [Evidence IEA]
cellulose synthase subunit BcsC-related outer membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_018418588.1
COORDINATES: similar to AA sequence:RefSeq:WP_013089035.1
COORDINATES: similar to AA sequence:RefSeq:WP_017332632.1
GO:0090540 - bacterial cellulose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009896062.1
GO:0016760 - cellulose synthase (UDP-forming) activity [Evidence IEA]; GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
GO:0030244 - cellulose biosynthetic process [Evidence IEA]; GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
UDP-forming cellulose synthase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004549777.1
GO:0005575 - cellular_component [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018418583.1
COORDINATES: similar to AA sequence:RefSeq:WP_004881331.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428775.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_008345779.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347303.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347302.1
COORDINATES: similar to AA sequence:RefSeq:WP_008347413.1
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_018425226.1
COORDINATES: similar to AA sequence:RefSeq:WP_007736377.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345769.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052083.1
COORDINATES: similar to AA sequence:RefSeq:WP_006558856.1
COORDINATES: similar to AA sequence:RefSeq:WP_006479795.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008345762.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341541.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011493347.1
COORDINATES: similar to AA sequence:RefSeq:WP_016355206.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253124.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253125.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253126.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014253145.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253143.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404068.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253127.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013541427.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253129.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253130.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253131.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345744.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014253133.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481271.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253146.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253147.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253148.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973064.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432735.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008920862.1
MSMEG_0572 family nitrogen starvation response protein
COORDINATES: similar to AA sequence:RefSeq:WP_007181139.1
GO:0000257 - nitrilase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345724.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013343234.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250374.1
sll0787 family AIR synthase-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_008345717.1
MSMEG_0570 family nitrogen starvation response protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250376.1
MSMEG_0569 family flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014250377.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250378.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013594.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923894.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014193037.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660310.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013341490.1
COORDINATES: similar to AA sequence:RefSeq:WP_014191476.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_017455304.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690792.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493349.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493348.1
GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005913090.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052203.1
COORDINATES: similar to AA sequence:RefSeq:WP_007750611.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404799.1
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_016347205.1
COORDINATES: similar to AA sequence:RefSeq:WP_013688885.1
COORDINATES: similar to AA sequence:RefSeq:WP_009973414.1
COORDINATES: similar to AA sequence:RefSeq:WP_015876440.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_009771457.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012404274.1
COORDINATES: similar to AA sequence:RefSeq:WP_017423657.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345663.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252091.1
CGNR zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094374.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253157.1
COORDINATES: similar to AA sequence:RefSeq:WP_018424935.1
COORDINATES: similar to AA sequence:RefSeq:WP_019952797.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193131.1
COORDINATES: similar to AA sequence:RefSeq:WP_006221843.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046936.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014193621.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051045.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006497969.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051043.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051042.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051041.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008345636.1
COORDINATES: similar to AA sequence:RefSeq:WP_016348513.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769758.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016348511.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345630.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016348509.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009238980.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336795.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345623.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_018424392.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008967265.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345617.1
amino acid ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011924651.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739954.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007586663.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739952.1
GO:0018822 - nitrile hydratase activity [Evidence IEA]
GO:0050898 - nitrile metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007739951.1
COORDINATES: similar to AA sequence:RefSeq:WP_019648856.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739949.1
COORDINATES: similar to AA sequence:RefSeq:WP_017329175.1
COORDINATES: similar to AA sequence:RefSeq:WP_015421780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345596.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070968.1
GO:0022841 - potassium ion leak channel activity [Evidence IEA]
GO:0071805 - potassium ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013338235.1
COORDINATES: similar to AA sequence:RefSeq:WP_012079943.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250408.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051501.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250410.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016348356.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006051504.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017231441.1
COORDINATES: similar to AA sequence:RefSeq:WP_006749778.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345576.1
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_020185120.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013338254.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047978.1
COORDINATES: similar to AA sequence:RefSeq:WP_015001591.1
COORDINATES: similar to AA sequence:RefSeq:WP_005664245.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052111.1
COORDINATES: similar to AA sequence:RefSeq:WP_006416577.1
COORDINATES: protein motif:HMM:NF019604.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009798030.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974732.1
COORDINATES: similar to AA sequence:RefSeq:WP_012484078.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019452110.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733563.1
LssY C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019452108.1
COORDINATES: similar to AA sequence:RefSeq:WP_007590013.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405301.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193252.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193251.1
urea carboxylase-associated family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014193250.1
COORDINATES: similar to AA sequence:RefSeq:WP_009915882.1
COORDINATES: similar to AA sequence:RefSeq:WP_006028110.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345528.1
COORDINATES: similar to AA sequence:RefSeq:WP_007749287.1
COORDINATES: similar to AA sequence:RefSeq:WP_009240262.1
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_007733814.1
COORDINATES: similar to AA sequence:RefSeq:WP_020068006.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016347366.1
COORDINATES: similar to AA sequence:RefSeq:WP_006766050.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066767.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341027.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341703.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345511.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008651299.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774880.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404412.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049695.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013587292.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343367.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432670.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015001757.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003964309.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345488.1
COORDINATES: protein motif:HMM:NF004282.0
GO:0031177 - phosphopantetheine binding [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
non-ribosomal peptide synthase/polyketide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014193649.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193650.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193651.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006910239.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014250476.1
COORDINATES: similar to AA sequence:RefSeq:WP_020069046.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193030.1
COORDINATES: protein motif:HMM:NF025069.2
COORDINATES: similar to AA sequence:RefSeq:WP_013341546.1
GO:0015267 - channel activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF020037.2
COORDINATES: similar to AA sequence:RefSeq:WP_011633120.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012653177.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345461.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010685612.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493345.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193744.1
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
SfnB family sulfur acquisition oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014193746.1
COORDINATES: similar to AA sequence:RefSeq:WP_003182033.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345455.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014193472.1
5-guanidino-2-oxopentanoate decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_014193473.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193474.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405468.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014193476.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177023.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193478.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193479.1
COORDINATES: similar to AA sequence:RefSeq:WP_013091586.1
COORDINATES: similar to AA sequence:RefSeq:NP_308718.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093425.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013581730.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252746.1
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008920256.1
COORDINATES: similar to AA sequence:RefSeq:WP_016348695.1
COORDINATES: similar to AA sequence:RefSeq:WP_013587867.1
COORDINATES: similar to AA sequence:RefSeq:WP_016348697.1
COORDINATES: similar to AA sequence:RefSeq:WP_016348698.1
COORDINATES: similar to AA sequence:RefSeq:WP_018437013.1
COORDINATES: similar to AA sequence:RefSeq:WP_014251910.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012733814.1