Gemmatirosa kalamazoonensis strain KBS708 chromosome, complete genome.
Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatirosa.
Genome Sequence and Methylome of Soil Bacterium Gemmatirosa kalamazoonensis KBS708T, a Member of the Rarely Cultivated Gemmatimonadetes Phylum
Submitted (23-DEC-2013) Department of Biosystems Engineering & Soil Science, University of Tennessee, 2506 EJ Chapman Drive, Knoxville, TN 37996, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP007128.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Assembly-Data-START##\nAssembly Method :: Hierarchical Genome Assembly Process v.\n 2013\nCoverage :: 118\nSequencing Technology :: 454; Illumina; PacBio\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/18/2022 14:48:47\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 6,447\nCDSs (total) :: 6,388\nGenes (coding) :: 6,323\nCDSs (with protein) :: 6,323\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 65\nCDSs (without protein) :: 65\nPseudo Genes (ambiguous residues) :: 0 of 65\nPseudo Genes (frameshifted) :: 9 of 65\nPseudo Genes (incomplete) :: 59 of 65\nPseudo Genes (internal stop) :: 0 of 65\nPseudo Genes (multiple problems) :: 3 of 65\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Gemmatirosa kalamazoonensis
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012422.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF040238.1
COORDINATES: protein motif:HMM:NF024139.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: protein motif:HMM:NF012798.2
integrase arm-type DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013440.2
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: protein motif:HMM:NF016154.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681885.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF014567.2
hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF013502.2
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF013918.2
sulfoxide reductase heme-binding subunit YedZ
COORDINATES: similar to AA sequence:RefSeq:WP_012681870.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: protein motif:HMM:TIGR00614.1
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:TIGR03562.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF025714.2
COORDINATES: protein motif:HMM:NF014688.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681864.1
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: protein motif:HMM:NF012904.2
GO:0016829 - lyase activity [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: protein motif:HMM:TIGR00378.1
GO:0015368 - calcium:cation antiporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: protein motif:HMM:NF013560.2
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:TIGR00257.1
COORDINATES: similar to AA sequence:RefSeq:WP_010951720.1
acyl-CoA dehydrogenase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF019403.2
heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009872258.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015895566.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF033480.1
bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
COORDINATES: protein motif:HMM:NF017835.2
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:TIGR02595.1
PEP-CTERM sorting domain-containing protein
GAF domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: protein motif:HMM:NF012907.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024295.2
COORDINATES: similar to AA sequence:RefSeq:WP_010967405.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF014606.2
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:TIGR00696.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: similar to AA sequence:RefSeq:WP_003113510.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: protein motif:HMM:TIGR01777.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF024242.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681856.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681854.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681853.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681851.1
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681848.1
COORDINATES: protein motif:HMM:NF016223.2
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:TIGR00208.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF012874.2
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: protein motif:HMM:NF025885.2
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012683583.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF017464.2
COORDINATES: protein motif:HMM:TIGR01395.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:NF014143.2
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00207.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: protein motif:HMM:TIGR01026.1
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: protein motif:HMM:NF025230.2
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: protein motif:HMM:NF014235.2
FliM/FliN family flagellar motor switch protein
COORDINATES: protein motif:HMM:TIGR02480.1
COORDINATES: protein motif:HMM:NF009438.0
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:TIGR00099.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01352.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681807.1
COORDINATES: protein motif:HMM:NF013478.2
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:TIGR01398.1
COORDINATES: protein motif:HMM:NF012662.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF005413.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:TIGR03434.1
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681795.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: protein motif:HMM:NF014195.2
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:NF014206.2
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:NF014638.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681786.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:TIGR03433.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF024810.2
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681782.1
COORDINATES: protein motif:HMM:NF028272.2
COORDINATES: protein motif:HMM:NF017353.2
COORDINATES: protein motif:HMM:NF039587.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF015898.2
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF015506.2
COORDINATES: protein motif:HMM:NF019335.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:NF025887.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF025601.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894993.1
COORDINATES: protein motif:HMM:NF025895.2
COORDINATES: protein motif:HMM:NF013206.2
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: protein motif:HMM:NF024867.2
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013843.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF014375.2
COORDINATES: protein motif:HMM:NF012712.2
COORDINATES: protein motif:HMM:NF015925.2
ectonucleotide pyrophosphatase/phosphodiesterase
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:NF019350.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: protein motif:HMM:NF017496.2
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:NF017451.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681549.1
COORDINATES: protein motif:HMM:NF027890.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024854.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:TIGR03075.1
PQQ-dependent dehydrogenase, methanol/ethanol family
COORDINATES: protein motif:HMM:NF024834.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02866.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02891.1
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF016041.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894960.1
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: protein motif:HMM:NF016150.2
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF012926.2
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF021982.2
COORDINATES: protein motif:HMM:NF007695.0
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF012993.2
COORDINATES: protein motif:HMM:NF013460.2
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895578.1
COORDINATES: protein motif:HMM:NF025774.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF025004.2
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: protein motif:HMM:NF012935.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682923.1
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:NF017853.2
COORDINATES: protein motif:HMM:NF013276.2
GO:0030599 - pectinesterase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF012516.2
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024799.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF025851.2
COORDINATES: protein motif:HMM:NF024863.2
TonB-dependent receptor plug domain-containing protein
COORDINATES: protein motif:HMM:NF014237.2
COORDINATES: protein motif:HMM:NF019592.2
RagB/SusD family nutrient uptake outer membrane protein
COORDINATES: protein motif:HMM:TIGR04056.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF012961.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
GO:0016021 - integral component of membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: protein motif:HMM:NF024910.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011089469.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF027479.2
COORDINATES: protein motif:HMM:NF002091.0
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011575334.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: protein motif:HMM:NF019113.2
COORDINATES: protein motif:HMM:NF021041.2
GO:0030570 - pectate lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF004325.0
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF002969.0
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001199390.1
COORDINATES: protein motif:HMM:TIGR02604.1
COORDINATES: protein motif:HMM:NF002794.0
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015895119.1
COORDINATES: protein motif:HMM:NF006129.0
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
thiamine pyrophosphate-requiring protein
COORDINATES: protein motif:HMM:NF012593.2
dicarboxylate/amino acid:cation symporter
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:TIGR03971.1
mycofactocin-coupled SDR family oxidoreductase
COORDINATES: protein motif:HMM:NF017077.2
COORDINATES: protein motif:HMM:TIGR02376.1
GO:0050421 - nitrite reductase (NO-forming) activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF016303.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF012343.2
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF015431.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682851.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683001.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683000.1
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: protein motif:HMM:NF013237.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:NF014342.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016330.2
SWIM zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681734.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039835.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894861.1
von Willebrand factor type A domain-containing protein
COORDINATES: protein motif:HMM:NF025092.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:NF019265.2
COORDINATES: similar to AA sequence:RefSeq:WP_003127365.1
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: protein motif:HMM:NF014658.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013736.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF021637.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681660.1
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF023621.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683615.1
GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894141.1
COORDINATES: protein motif:HMM:NF015859.2
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_001990088.1
COORDINATES: protein motif:HMM:NF040269.1
COORDINATES: protein motif:HMM:NF016265.2
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681656.1
COORDINATES: protein motif:HMM:NF013592.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_012872293.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF012478.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF014307.2
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: protein motif:HMM:NF024179.2
COORDINATES: protein motif:HMM:NF006942.0
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012682404.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682408.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681508.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681509.1
COORDINATES: protein motif:HMM:NF004799.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014795.2
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF037979.1
COORDINATES: similar to AA sequence:RefSeq:WP_086896509.1
GO:0004803 - transposase activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682461.1
COORDINATES: protein motif:HMM:NF036911.2
protein-glutamine glutaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682718.1
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: protein motif:HMM:NF023174.2
COORDINATES: protein motif:HMM:NF024822.2
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: protein motif:HMM:NF018436.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682615.1
COORDINATES: protein motif:HMM:NF014026.2
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014386.2
cytochrome d ubiquinol oxidase subunit II
COORDINATES: protein motif:HMM:NF013791.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682399.1
COORDINATES: protein motif:HMM:NF016994.2
COORDINATES: protein motif:HMM:TIGR03805.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF006596.0
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894369.1
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: protein motif:HMM:NF027232.2
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: protein motif:HMM:NF014505.2
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: protein motif:HMM:NF013561.2
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF024865.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682659.1
COORDINATES: protein motif:HMM:TIGR02772.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
GDCCVxC domain-containing (seleno)protein
COORDINATES: protein motif:HMM:NF021465.2
COORDINATES: protein motif:HMM:NF017771.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_003243237.1
COORDINATES: protein motif:HMM:NF018038.2
COORDINATES: protein motif:HMM:NF025160.2
COORDINATES: protein motif:HMM:TIGR02913.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: protein motif:HMM:NF017505.2
COORDINATES: protein motif:HMM:TIGR02999.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF016668.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF038403.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
permease prefix domain 1-containing protein
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681738.1
COORDINATES: protein motif:HMM:NF012200.0
choice-of-anchor D domain-containing protein
COORDINATES: protein motif:HMM:NF016430.2
COORDINATES: protein motif:HMM:NF013989.2
COORDINATES: protein motif:HMM:NF015735.2
COORDINATES: protein motif:HMM:NF014867.2
COORDINATES: protein motif:HMM:NF040341.1
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: protein motif:HMM:NF024922.2
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: protein motif:HMM:NF024844.2
COORDINATES: protein motif:HMM:NF036876.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895456.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF015658.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683695.1
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF009005.0
COORDINATES: similar to AA sequence:RefSeq:WP_012321778.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894958.1
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:TIGR01845.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895439.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF021788.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF004079.0
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: protein motif:HMM:NF005994.0
formylglycine-generating enzyme family protein
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016413.2
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF009750.0
GO:0047559 - 3-dehydro-L-gulonate 2-dehydrogenase activity [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006799.0
COORDINATES: protein motif:HMM:NF019309.2
COORDINATES: protein motif:HMM:NF012863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894351.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018305.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00027.1
COORDINATES: protein motif:HMM:NF013695.2
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014346.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894728.1
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF014896.2
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:NF022588.2
COORDINATES: protein motif:HMM:TIGR01528.1
GO:0015663 - nicotinamide mononucleotide transmembrane transporter activity [Evidence IEA]
GO:0015890 - nicotinamide mononucleotide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF007161.0
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
decarboxylating 6-phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00871.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683676.1
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894604.1
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:NF015438.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013766.2
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF012387.2
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF027610.2
COORDINATES: protein motif:HMM:NF019157.2
tannase/feruloyl esterase family alpha/beta hydrolase
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:TIGR04256.1
COORDINATES: protein motif:HMM:NF013222.2
methylated-DNA--[protein]-cysteine S-methyltransferase
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: protein motif:HMM:NF016207.2
FMN-binding negative transcriptional regulator
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF014476.2
COORDINATES: protein motif:HMM:NF016840.2
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681544.1
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: protein motif:HMM:NF019590.2
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: protein motif:HMM:NF019301.2
COORDINATES: protein motif:HMM:NF012503.2
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001251544.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF014950.2
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:TIGR03118.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF025013.2
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:NF024860.2
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF012936.2
COORDINATES: protein motif:HMM:NF005548.0
COORDINATES: similar to AA sequence:RefSeq:WP_012682135.1
COORDINATES: protein motif:HMM:NF024753.2
pyrroloquinoline quinone-dependent dehydrogenase
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895702.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF002528.0
COORDINATES: similar to AA sequence:RefSeq:WP_015895716.1
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: protein motif:HMM:NF013123.2
COORDINATES: protein motif:HMM:NF025006.2
COORDINATES: protein motif:HMM:NF016952.2
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015895725.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895539.1
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: protein motif:HMM:NF015530.2
COORDINATES: protein motif:HMM:TIGR04019.1
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
bacillithiol system redox-active protein YtxJ
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF006874.0
There are 14 genes on the gvp gene cluster in halophilic archaea. The product of gvpA is a structural component of gas vesicles, which provide buoyancy to cells and promote flotation. It has been reported that the products of gvpAO and gvpFGJKLM represent the minimal set required for gas vesicle formation in halophilic archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012944.2
COORDINATES: protein motif:HMM:NF016977.2
COORDINATES: protein motif:HMM:NF018129.2
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: protein motif:HMM:NF016976.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013714.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681551.1
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: protein motif:HMM:NF024911.2
COORDINATES: protein motif:HMM:NF012995.2
COORDINATES: protein motif:HMM:NF025091.2
isocitrate lyase/phosphoenolpyruvate mutase family protein
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF018648.2
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:NF039620.1
COORDINATES: protein motif:HMM:NF023266.2
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: protein motif:HMM:NF025698.2
COORDINATES: protein motif:HMM:TIGR00733.1
GO:0035673 - oligopeptide transmembrane transporter activity [Evidence IEA]
GO:0006857 - oligopeptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018446.2
GO:0005267 - potassium channel activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895079.1
COORDINATES: protein motif:HMM:NF016152.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895167.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682299.1
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024700.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012975.2
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895713.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015895714.1
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF013618.2
transglycosylase SLT domain-containing protein
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF013424.2
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:NF019225.2
COORDINATES: protein motif:HMM:NF028169.2
TetR-like C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019351.2
GO:0005507 - copper ion binding [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: protein motif:HMM:NF012417.2
COORDINATES: protein motif:HMM:NF020498.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895356.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF015535.2
COORDINATES: protein motif:HMM:NF013955.2
COORDINATES: protein motif:HMM:NF037749.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF018455.2
COORDINATES: protein motif:HMM:NF040444.1
COORDINATES: protein motif:HMM:NF013340.2
GO:0005575 - cellular_component [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: protein motif:HMM:NF013228.2
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015895737.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021501.2
COORDINATES: protein motif:HMM:NF024045.2
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:TIGR03593.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004933881.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015895744.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00663.1
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:TIGR02246.1
COORDINATES: similar to AA sequence:RefSeq:WP_004153945.1
COORDINATES: protein motif:HMM:NF017007.2
COORDINATES: protein motif:HMM:NF014428.2
COORDINATES: protein motif:HMM:NF033105.1
COORDINATES: similar to AA sequence:RefSeq:WP_001199192.1
AAC(3)-VI family aminoglycoside N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015894973.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894118.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00521
SAM riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF002537.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
COORDINATES: protein motif:HMM:NF013259.2
COORDINATES: protein motif:HMM:NF007922.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0043115 - precorrin-2 dehydrogenase activity [Evidence IEA]; GO:0051266 - sirohydrochlorin ferrochelatase activity [Evidence IEA]; GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025167.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894121.1
COORDINATES: protein motif:HMM:NF012869.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682317.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894117.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681605.1
COORDINATES: protein motif:HMM:NF025037.2
COORDINATES: protein motif:HMM:NF013360.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016641 - oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF012925.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682183.1
ribonuclease H-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015895555.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF015764.2
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682570.1
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682566.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683449.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
Derived by automated computational analysis using gene prediction method: cmsearch.
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681497.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040439.1
COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681501.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681504.1
COORDINATES: protein motif:HMM:NF013586.2
GO:0008233 - peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: protein motif:HMM:TIGR00136.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003097243.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681516.1
COORDINATES: protein motif:HMM:NF013909.2
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: protein motif:HMM:NF028235.2
COORDINATES: protein motif:HMM:NF017263.2
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: similar to AA sequence:RefSeq:WP_002415999.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00711.1
DHA2 family efflux MFS transporter permease subunit
COORDINATES: protein motif:HMM:NF036520.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681526.1
COORDINATES: protein motif:HMM:NF013253.2
GO:0045203 - integral component of cell outer membrane [Evidence IEA]
GO:0071702 - organic substance transport [Evidence IEA]
SusC/RagA family TonB-linked outer membrane protein
COORDINATES: protein motif:HMM:NF015893.2
COORDINATES: protein motif:HMM:TIGR02352.1
GO:0016647 - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor [Evidence IEA]
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681539.1
COORDINATES: protein motif:HMM:NF025183.2
COORDINATES: protein motif:HMM:NF012945.2
COORDINATES: protein motif:HMM:NF037170.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895064.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895063.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681618.1
GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681623.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_012681624.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681625.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_012681626.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681627.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012681628.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681630.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1
COORDINATES: protein motif:HMM:NF024864.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: protein motif:HMM:TIGR00629.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: protein motif:HMM:NF013252.2
COORDINATES: protein motif:HMM:NF027952.2
COORDINATES: protein motif:HMM:NF012282.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681634.1
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681638.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012683675.1
COORDINATES: protein motif:HMM:NF025701.2
protease complex subunit PrcB family protein
glycogen-binding domain-containing protein
COORDINATES: protein motif:HMM:NF027875.2
isoamylase early set domain-containing protein
COORDINATES: protein motif:HMM:NF006560.0
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682722.1
COORDINATES: protein motif:HMM:NF024829.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015895547.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681645.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF001770.0
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01529.1
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014793.2
Asd/ArgC dimerization domain-containing protein
COORDINATES: protein motif:HMM:NF012899.2
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002325.0
COORDINATES: protein motif:HMM:NF024701.2
COORDINATES: similar to AA sequence:RefSeq:WP_003228292.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681890.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681889.1
peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020496.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_015895105.1
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: protein motif:HMM:NF024759.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894782.1
DPP IV N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01313.1
COORDINATES: protein motif:HMM:NF021357.2
COORDINATES: protein motif:HMM:NF015866.2
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF019307.2
peptidase dimerization domain-containing protein
COORDINATES: protein motif:HMM:NF017015.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895572.1
GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF024857.2
COORDINATES: protein motif:HMM:NF020083.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF001924.0
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894989.1
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:TIGR02149.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002772.0
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: protein motif:HMM:NF019260.2
COORDINATES: protein motif:HMM:NF013915.2
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF024498.2
thioredoxin fold domain-containing protein
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF023828.2
COORDINATES: protein motif:HMM:NF016921.2
COORDINATES: protein motif:HMM:NF024180.2
CHAT domain-containing tetratricopeptide repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894235.1
GO:0003924 - GTPase activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF013354.2
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF024758.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895554.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894474.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894475.1
COORDINATES: protein motif:HMM:NF003642.0
COORDINATES: similar to AA sequence:RefSeq:WP_000651584.1
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:NF025210.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894193.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015894192.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015894191.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894785.1
COORDINATES: protein motif:HMM:NF007214.0
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024436.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895103.1
COORDINATES: protein motif:HMM:NF039679.1
COORDINATES: protein motif:HMM:NF025702.2
COORDINATES: protein motif:HMM:NF006006.0
COORDINATES: protein motif:HMM:NF017760.2
outer membrane lipoprotein-sorting protein
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: protein motif:HMM:NF038402.1
COORDINATES: protein motif:HMM:NF017758.2
COORDINATES: protein motif:HMM:NF004837.0
COORDINATES: protein motif:HMM:NF012699.2
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002340613.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: protein motif:HMM:NF011964.0
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
COORDINATES: protein motif:HMM:NF021385.2
COORDINATES: protein motif:HMM:NF018647.2
COORDINATES: protein motif:HMM:NF021509.2
COORDINATES: protein motif:HMM:NF025793.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015895597.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03008.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682564.1
COORDINATES: similar to AA sequence:RefSeq:WP_003243944.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895719.1
GO:0000700 - mismatch base pair DNA N-glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013869.2
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
large-conductance mechanosensitive channel protein MscL
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF018743.2
COORDINATES: protein motif:HMM:NF013927.2
COORDINATES: protein motif:HMM:NF025607.2
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894698.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895603.1
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682857.1
GO:0004795 - threonine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00657.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895691.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017370549.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016854.2
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: protein motif:HMM:NF014850.2
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894111.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013300.2
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039409.1
COORDINATES: protein motif:HMM:NF016817.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: protein motif:HMM:NF023520.2
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:TIGR00104.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: protein motif:HMM:NF012471.2
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037968.1
COORDINATES: protein motif:HMM:NF017984.2
winged helix DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF022963.2
COORDINATES: protein motif:HMM:NF025392.2
COORDINATES: similar to AA sequence:RefSeq:WP_008437347.1
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system prevent-host-death family antitoxin
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015895406.1
COORDINATES: protein motif:HMM:NF025029.2
murein L,D-transpeptidase catalytic domain family protein
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF014758.2
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF013134.2
xanthine dehydrogenase family protein subunit M
COORDINATES: protein motif:HMM:NF012787.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF019473.2
COORDINATES: protein motif:HMM:NF012656.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683713.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895402.1
COORDINATES: protein motif:HMM:NF025679.2
COORDINATES: protein motif:HMM:NF013613.2
COORDINATES: protein motif:HMM:NF021596.2
COORDINATES: protein motif:HMM:NF013126.2
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR01488.1
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: protein motif:HMM:TIGR01327.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: protein motif:HMM:NF013594.2
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015049.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF015817.2
DbpA RNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895396.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF014713.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895388.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: similar to AA sequence:RefSeq:WP_015894494.1
COORDINATES: protein motif:HMM:NF025150.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681566.1
COORDINATES: protein motif:HMM:NF027716.2
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681749.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681884.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:TIGR00976.1
COORDINATES: protein motif:HMM:NF013132.2
DASS family sodium-coupled anion symporter
COORDINATES: protein motif:HMM:NF016143.2
COORDINATES: protein motif:HMM:TIGR04265.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF024091.2
methanol/ethanol family PQQ-dependent dehydrogenase
COORDINATES: protein motif:HMM:NF013397.2
formate/nitrite transporter family protein
COORDINATES: protein motif:HMM:NF012575.2
COORDINATES: protein motif:HMM:NF015747.2
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: protein motif:HMM:TIGR04555.1
GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039689.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF023327.2
COORDINATES: protein motif:HMM:NF013491.2
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013226.2
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF012355.2
COORDINATES: protein motif:HMM:NF024304.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682336.1
COORDINATES: protein motif:HMM:NF019430.2
GO:0042597 - periplasmic space [Evidence IEA]
Spy/CpxP family protein refolding chaperone
COORDINATES: protein motif:HMM:NF012705.2
phytoene/squalene synthase family protein
COORDINATES: protein motif:HMM:NF016155.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894219.1
GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00937.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024515.2
COORDINATES: similar to AA sequence:RefSeq:WP_010948715.1
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:NF006189.0
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: protein motif:HMM:NF013173.2
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015177.2
COORDINATES: protein motif:HMM:NF017964.2
glycogen debranching enzyme N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012455.2
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: protein motif:HMM:NF028222.2
COORDINATES: protein motif:HMM:NF021996.2
COORDINATES: protein motif:HMM:NF038123.1
COORDINATES: protein motif:HMM:NF021530.2
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF019640.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF012630.2
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012271.2
fibronectin type III domain-containing protein
COORDINATES: protein motif:HMM:TIGR00018.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001452.0
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015895558.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895231.1
COORDINATES: similar to AA sequence:RefSeq:WP_000097072.1
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF007849.0
GO:0008672 - 2-dehydro-3-deoxyglucarate aldolase activity [Evidence IEA]
GO:0019394 - glucarate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01505.1
GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]
GO:0019580 - galactarate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03248.1
GO:0008867 - galactarate dehydratase activity [Evidence IEA]
GO:0046392 - galactarate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002011282.1
COORDINATES: protein motif:HMM:TIGR00030.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003723180.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF019352.2
COORDINATES: similar to AA sequence:RefSeq:WP_011881614.1
COORDINATES: protein motif:HMM:NF012335.2
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR00915.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011239965.1
carbohydrate binding family 9 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682012.1
COORDINATES: protein motif:HMM:NF024884.2
COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894713.1
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF013109.2
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01250.1
COORDINATES: protein motif:HMM:NF019459.2
COORDINATES: protein motif:HMM:TIGR02402.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
malto-oligosyltrehalose trehalohydrolase
COORDINATES: protein motif:HMM:NF024934.2
COORDINATES: protein motif:HMM:NF021778.2
beta-propeller fold lactonase family protein
COORDINATES: protein motif:HMM:TIGR03871.1
quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF021214.2
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_128082387.1
COORDINATES: protein motif:HMM:NF018649.2
COORDINATES: protein motif:HMM:NF020382.2
COORDINATES: protein motif:HMM:NF018332.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894501.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:NF014582.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002336979.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007271086.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:TIGR02824.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894901.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF039204.1
leishmanolysin-related zinc metalloendopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_015894460.1
COORDINATES: protein motif:HMM:NF014675.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895423.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894895.1
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894367.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894366.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008538150.1
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:TIGR00654.1
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:TIGR01236.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]
GO:0006562 - proline catabolic process [Evidence IEA]
L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF012722.2
COORDINATES: protein motif:HMM:TIGR00587.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894881.1
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894877.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894876.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894875.1
COORDINATES: protein motif:HMM:NF018980.2
COORDINATES: protein motif:HMM:NF023697.2
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894864.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF022142.2
COORDINATES: protein motif:HMM:TIGR01994.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894843.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894841.1
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894839.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894838.1
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:NF025418.2
COORDINATES: protein motif:HMM:NF027640.2
COORDINATES: protein motif:HMM:NF012989.2
COORDINATES: protein motif:HMM:NF014087.2
COORDINATES: protein motif:HMM:NF013283.2
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894833.1
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894827.1
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:NF019127.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894819.1
COORDINATES: protein motif:HMM:NF014500.2
COORDINATES: similar to AA sequence:RefSeq:WP_000151261.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:TIGR00004.1
COORDINATES: protein motif:HMM:TIGR00066.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022623.2
COORDINATES: protein motif:HMM:NF013923.2
COORDINATES: protein motif:HMM:TIGR03178.1
GO:0004038 - allantoinase activity [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0000256 - allantoin catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02961.1
GO:0004037 - allantoicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010372.0
GO:0019628 - urate catabolic process [Evidence IEA]
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
COORDINATES: protein motif:HMM:TIGR02962.1
COORDINATES: protein motif:HMM:NF017945.2
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: protein motif:HMM:NF017050.2
COORDINATES: protein motif:HMM:NF019013.2
alpha/beta hydrolase fold domain-containing protein
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_013913729.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894490.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894729.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894723.1
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:NF025585.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:TIGR01755.1
GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012686.2
aminoglycoside phosphotransferase family protein
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF005686.0
COORDINATES: protein motif:HMM:NF015559.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894363.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_012683574.1
COORDINATES: protein motif:HMM:NF025680.2
COORDINATES: protein motif:HMM:NF027805.2
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF012931.2
COORDINATES: protein motif:HMM:NF014852.2
COORDINATES: protein motif:HMM:TIGR00831.1
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF036967.2
COORDINATES: protein motif:HMM:TIGR02100.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681581.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: protein motif:HMM:NF019229.2
COORDINATES: protein motif:HMM:NF016240.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682758.1
COORDINATES: protein motif:HMM:NF008823.0
COORDINATES: protein motif:HMM:NF040501.1
arsenic resistance N-acetyltransferase ArsN2
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895021.1
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: protein motif:HMM:NF014544.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894495.1
COORDINATES: similar to AA sequence:RefSeq:WP_010953379.1
COORDINATES: protein motif:HMM:NF037716.2
COORDINATES: protein motif:HMM:NF014664.2
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003477.0
COORDINATES: protein motif:HMM:NF018431.2
COORDINATES: protein motif:HMM:NF037510.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF019344.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894674.1
nucleoside triphosphate pyrophosphohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681917.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681918.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681919.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681920.1
BMP family ABC transporter substrate-binding protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF028519.2
COORDINATES: protein motif:HMM:NF005701.0
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006879.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681926.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF019095.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681928.1
GO:0004334 - fumarylacetoacetase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681934.1
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:NF006886.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681938.1
COORDINATES: protein motif:HMM:TIGR02074.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012981.2
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683704.1
COORDINATES: protein motif:HMM:NF008730.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01317.1
pre-peptidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681943.1
COORDINATES: protein motif:HMM:NF020390.2
COORDINATES: protein motif:HMM:NF009381.0
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02170.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012681951.1
COORDINATES: protein motif:HMM:NF012304.2
COORDINATES: protein motif:HMM:TIGR01910.1
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR00685.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681965.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681969.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF017373.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681973.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681989.1
COORDINATES: protein motif:HMM:NF027964.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_012681994.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681995.1
COORDINATES: protein motif:HMM:NF015582.2
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:TIGR01796.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012998.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682005.1
COORDINATES: protein motif:HMM:NF013292.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682007.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682017.1
COORDINATES: protein motif:HMM:NF036525.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682023.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682024.1
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894946.1
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682029.1
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: protein motif:HMM:NF024948.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682044.1
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_020801803.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682047.1
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012682048.1
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: similar to AA sequence:RefSeq:WP_003807115.1
COORDINATES: similar to AA sequence:RefSeq:WP_003807114.1
COORDINATES: protein motif:HMM:NF021254.2
exosortase/archaeosortase family protein
COORDINATES: protein motif:HMM:NF023410.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682073.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: similar to AA sequence:RefSeq:WP_005837264.1
COORDINATES: similar to AA sequence:RefSeq:WP_010969031.1
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: protein motif:HMM:NF023403.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894995.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682060.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:TIGR01686.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682075.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682082.1
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: protein motif:HMM:NF014774.2
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: similar to AA sequence:RefSeq:WP_012682089.1
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682093.1
GO:0008817 - cob(I)yrinic acid a,c-diamide adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF008400.0
GO:0004106 - chorismate mutase activity [Evidence IEA]; GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0046417 - chorismate metabolic process [Evidence IEA]; GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
bifunctional chorismate mutase/prephenate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012682094.1
COORDINATES: protein motif:HMM:NF013625.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682095.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: protein motif:HMM:TIGR00147.1
GO:0001727 - lipid kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894236.1
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:TIGR03723.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_012682110.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015734.2
COORDINATES: protein motif:HMM:TIGR00563.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF001159.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014725.2
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682116.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682117.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_012682118.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_015894937.1
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_012682123.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_012682124.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF020249.2
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682130.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682132.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025692.2
COORDINATES: protein motif:HMM:TIGR00149.1
secondary thiamine-phosphate synthase enzyme YjbQ
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF002003.0
GO:0003905 - alkylbase DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682145.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682146.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: protein motif:HMM:NF022137.2
class I SAM-dependent rRNA methyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015607.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682156.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682199.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682200.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682203.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01146.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682205.1
COORDINATES: protein motif:HMM:NF014838.2
COORDINATES: protein motif:HMM:NF016311.2
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF015944.2
COORDINATES: protein motif:HMM:NF024181.2
SusD/RagB family nutrient-binding outer membrane lipoprotein
COORDINATES: protein motif:HMM:TIGR00398.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF041131.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: similar to AA sequence:RefSeq:WP_012682225.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: protein motif:HMM:NF005298.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021535.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF010925.0
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01350.1
COORDINATES: protein motif:HMM:TIGR01349.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]; GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012682238.1
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
pyruvate dehydrogenase complex E1 component subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012682239.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:NF004019.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021576.2
COORDINATES: protein motif:HMM:TIGR00924.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682246.1
COORDINATES: similar to AA sequence:RefSeq:WP_017953349.1
peptide ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015084.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682252.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: protein motif:HMM:NF002270.0
COORDINATES: protein motif:HMM:NF002879.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682257.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682260.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: protein motif:HMM:NF039824.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682268.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682269.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: protein motif:HMM:NF024821.2
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: protein motif:HMM:NF014845.2
COORDINATES: protein motif:HMM:NF005932.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682282.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682302.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: protein motif:HMM:NF017103.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012682305.1
COORDINATES: protein motif:HMM:NF013215.2
COORDINATES: protein motif:HMM:NF018684.2
COORDINATES: protein motif:HMM:NF013152.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895474.1
COORDINATES: protein motif:HMM:NF015146.2
COORDINATES: protein motif:HMM:NF015085.2
COORDINATES: protein motif:HMM:NF027651.2
COORDINATES: protein motif:HMM:NF015853.2
cytochrome c-type biogenesis protein CcmH
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895432.1
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682318.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012682319.1
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012682322.1
COORDINATES: protein motif:HMM:NF019375.2
COORDINATES: protein motif:HMM:TIGR00435.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682337.1
COORDINATES: protein motif:HMM:TIGR00964.1
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00922.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
COORDINATES: similar to AA sequence:RefSeq:WP_001074622.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002854784.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682344.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012682345.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_012682348.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682349.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682359.1
COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682361.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
COORDINATES: protein motif:HMM:TIGR03953.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682364.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682365.1
COORDINATES: similar to AA sequence:RefSeq:WP_009001861.1
COORDINATES: similar to AA sequence:RefSeq:WP_001148024.1
COORDINATES: similar to AA sequence:RefSeq:WP_006784436.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1
COORDINATES: similar to AA sequence:RefSeq:WP_000855718.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628116.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682373.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682374.1
COORDINATES: similar to AA sequence:RefSeq:WP_004924130.1
COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1
COORDINATES: similar to AA sequence:RefSeq:WP_008372550.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682378.1
COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1
COORDINATES: protein motif:HMM:TIGR01308.1
COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682382.1
COORDINATES: protein motif:HMM:NF001381.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682384.1
COORDINATES: protein motif:HMM:TIGR02024.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682390.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682392.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682396.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04018.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
YpdA family putative bacillithiol disulfide reductase
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682398.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013046.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF025420.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682419.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682424.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: protein motif:HMM:NF007148.0
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682431.1
vitamin B12-dependent ribonucleotide reductase
cupredoxin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015895661.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682592.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682593.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682596.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF013384.2
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:TIGR02397.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682602.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682603.1
COORDINATES: protein motif:HMM:NF015232.2
COORDINATES: protein motif:HMM:NF012255.2
COORDINATES: protein motif:HMM:NF013250.2
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00200.1
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: protein motif:HMM:TIGR00420.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
GO:0004061 - arylformamidase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: protein motif:HMM:NF015272.2
GO:0020037 - heme binding [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
tryptophan 2,3-dioxygenase family protein
COORDINATES: protein motif:HMM:TIGR04001.1
GO:0019213 - deacetylase activity [Evidence IEA]
bacillithiol biosynthesis deacetylase BshB1
COORDINATES: similar to AA sequence:RefSeq:WP_015895284.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682632.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682635.1
COORDINATES: protein motif:HMM:NF012876.2
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682655.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682657.1
COORDINATES: protein motif:HMM:NF003819.0
YajQ family cyclic di-GMP-binding protein
COORDINATES: protein motif:HMM:TIGR01125.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: protein motif:HMM:NF024779.2
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682670.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682673.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF017902.2
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF015510.2
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_012682680.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682691.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682692.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682694.1
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682697.1
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682708.1
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:TIGR00374.1
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682736.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682739.1
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012682741.1
COORDINATES: protein motif:HMM:NF024703.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682746.1
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00464.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022481.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682768.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:TIGR01662.1
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: protein motif:HMM:NF004349.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682774.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017936.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682778.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682780.1
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682781.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682782.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682784.1
COORDINATES: protein motif:HMM:TIGR04138.1
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00530.1
COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF012760.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894361.1
COORDINATES: protein motif:HMM:NF021082.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683551.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683550.1
COORDINATES: protein motif:HMM:NF013593.2
COORDINATES: protein motif:HMM:NF025946.2
COORDINATES: protein motif:HMM:NF013442.2
GO:0004474 - malate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01722.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682881.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01241.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00159.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012361.2
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013427.2
TraR/DksA family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290481.1
COORDINATES: protein motif:HMM:NF016398.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF025690.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682899.1
COORDINATES: protein motif:HMM:NF012529.2
CheB methylesterase domain-containing protein
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: protein motif:HMM:TIGR00006.1
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF013100.2
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF001126.0
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_012682914.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:NF013279.2
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: protein motif:HMM:NF016027.2
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:TIGR01174.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682928.1
COORDINATES: protein motif:HMM:NF039309.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682931.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682936.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682939.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF016071.2
COORDINATES: protein motif:HMM:TIGR01574.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: similar to AA sequence:RefSeq:WP_012682945.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682946.1
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682956.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682957.1
COORDINATES: protein motif:HMM:TIGR00878.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: protein motif:HMM:NF006767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682962.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_012682963.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF014534.2
HPF/RaiA family ribosome-associated protein
COORDINATES: protein motif:HMM:TIGR00679.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: protein motif:HMM:NF015769.2
COORDINATES: protein motif:HMM:NF015566.2
COORDINATES: protein motif:HMM:NF015570.2
PTS system mannose/fructose/sorbose family transporter subunit IID
COORDINATES: similar to AA sequence:RefSeq:WP_012682971.1
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012682973.1
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682981.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683003.1
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_012683004.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012683005.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683008.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683013.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683014.1
COORDINATES: protein motif:HMM:TIGR00585.2
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_012683021.1
GO:0071793 - bacillithiol biosynthetic process [Evidence IEA]
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
COORDINATES: protein motif:HMM:NF014703.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014919.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683024.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683025.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR03991.1
COORDINATES: similar to AA sequence:RefSeq:WP_000884181.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:TIGR00132.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_012683037.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012683040.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: protein motif:HMM:TIGR01953.1
COORDINATES: protein motif:HMM:NF013417.2
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003163304.1
COORDINATES: protein motif:HMM:TIGR00487.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683046.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683052.1
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683059.1
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012683060.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00042.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015899.2
COORDINATES: protein motif:HMM:NF033709.1
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:TIGR02098.1
COORDINATES: protein motif:HMM:TIGR00020.2
GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683068.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683070.1
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: protein motif:HMM:NF012443.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683073.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:NF002060.0
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:NF009667.0
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]; GO:0009245 - lipid A biosynthetic process [Evidence IEA]
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_012683078.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015961.2
COORDINATES: protein motif:HMM:NF014645.2
COORDINATES: similar to AA sequence:RefSeq:WP_010902870.1
COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF021586.2
bacillithiol biosynthesis cysteine-adding enzyme BshC
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF001824.0
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006050.0
COORDINATES: protein motif:HMM:TIGR00299.1
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:NF016354.2
COORDINATES: protein motif:HMM:TIGR03594.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00023.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_012683092.1
NAD(P)-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683095.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF012911.2
COORDINATES: protein motif:HMM:NF002636.0
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683101.1
COORDINATES: protein motif:HMM:NF021126.2
COORDINATES: protein motif:HMM:TIGR02395.1
COORDINATES: protein motif:HMM:TIGR04406.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR04409.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter periplasmic protein LptC
COORDINATES: similar to AA sequence:RefSeq:WP_012683110.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:TIGR01670.1
COORDINATES: protein motif:HMM:NF003543.0
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683113.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003952.0
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012683115.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683117.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:TIGR02225.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683120.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012683121.1
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03700.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683124.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683125.1
COORDINATES: similar to AA sequence:RefSeq:WP_002442508.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: protein motif:HMM:TIGR00128.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683128.1
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683130.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: protein motif:HMM:NF001908.0
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683134.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683135.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: protein motif:HMM:NF015644.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683137.1
COORDINATES: protein motif:HMM:TIGR01770.1
COORDINATES: protein motif:HMM:TIGR01972.1
COORDINATES: protein motif:HMM:NF005141.0
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683141.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683143.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683144.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:NF024900.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683146.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:TIGR01958.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_012683148.1
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683150.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683151.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683152.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683156.1
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012683157.1
fumarate reductase/succinate dehydrogenase flavoprotein subunit
COORDINATES: protein motif:HMM:TIGR02046.1
succinate dehydrogenase cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012683159.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_012683163.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683164.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: protein motif:HMM:NF012349.2
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001036337.1
COORDINATES: similar to AA sequence:RefSeq:WP_011897301.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF020090.2
low molecular weight protein arginine phosphatase
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012683174.1
COORDINATES: protein motif:HMM:TIGR00665.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF013365.2
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_012683178.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: protein motif:HMM:NF002074.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00183.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: similar to AA sequence:RefSeq:WP_000944957.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683188.1
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683190.1
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683194.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683195.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683196.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683197.1
cobalamin B12-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00641.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683199.1
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:NF015436.2
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683203.1
COORDINATES: protein motif:HMM:NF001750.0
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF024791.2
LytR C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013456.2
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:TIGR00526.1
COORDINATES: protein motif:HMM:NF012511.2
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683212.1
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: protein motif:HMM:NF012444.2
indole-3-glycerol phosphate synthase TrpC
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013116.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683220.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683221.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF003685.0
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
phosphatidylserine decarboxylase family protein
phosphatidylcholine/phosphatidylserine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012683224.1
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: similar to AA sequence:RefSeq:WP_000666779.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:NF024845.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683226.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: similar to AA sequence:RefSeq:WP_012683227.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01828.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_018281842.1
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000743900.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001040954.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012683245.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: protein motif:HMM:TIGR02210.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:NF016019.2
COORDINATES: protein motif:HMM:NF016011.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683250.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683251.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683253.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012683254.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683259.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683261.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683262.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683263.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00116.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683265.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683266.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683267.1
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012683271.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012683272.1
COORDINATES: protein motif:HMM:NF024965.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683278.1
COORDINATES: protein motif:HMM:TIGR00017.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012683280.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012683281.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:TIGR00036.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: protein motif:HMM:NF006570.0
COORDINATES: similar to AA sequence:RefSeq:WP_012683284.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016024.2
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF003933.0
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683359.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_012683360.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: protein motif:HMM:TIGR00472.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683364.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012683365.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683366.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683367.1
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683370.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:NF013665.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01510.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF037628.2
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020977.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683384.1
histidine triad nucleotide-binding protein
COORDINATES: protein motif:HMM:TIGR00046.1
GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF008035.0
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683391.1
COORDINATES: protein motif:HMM:NF017864.2
COORDINATES: protein motif:HMM:TIGR00056.1
COORDINATES: protein motif:HMM:NF018010.2
COORDINATES: protein motif:HMM:NF025179.2
COORDINATES: protein motif:HMM:TIGR03025.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_046551259.1
COORDINATES: protein motif:HMM:TIGR03570.1
COORDINATES: protein motif:HMM:NF025627.2
GO:0004062 - aryl sulfotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683396.1
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683398.1
replication-associated recombination protein A
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01221.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF008726.1
COORDINATES: protein motif:HMM:NF012913.2
COORDINATES: protein motif:HMM:NF024969.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039343.1
COORDINATES: protein motif:HMM:TIGR00344.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_007024189.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014119.2
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: protein motif:HMM:NF015962.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683412.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00531.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683416.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:NF014470.2
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:NF025572.2
COORDINATES: protein motif:HMM:TIGR01224.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683425.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683426.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF024915.2
COORDINATES: protein motif:HMM:TIGR02802.1
peptidoglycan-associated lipoprotein Pal
COORDINATES: protein motif:HMM:NF024503.2
TonB C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012683435.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683437.1
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - ribosomal protein S5-alanine alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_012683442.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00691.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: protein motif:HMM:NF009538.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR03302.1
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_012683453.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683454.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683457.1
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012683459.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683460.1
COORDINATES: similar to AA sequence:RefSeq:WP_017042856.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF003513.0
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012683463.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007603045.1
COORDINATES: similar to AA sequence:RefSeq:WP_010262446.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
COORDINATES: protein motif:HMM:NF001273.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003564285.1
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683473.1
COORDINATES: protein motif:HMM:NF025046.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683475.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683476.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:TIGR02927.1
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
COORDINATES: protein motif:HMM:NF006667.0
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF012880.2
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012683486.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683490.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_012683491.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00813.1
COORDINATES: protein motif:HMM:NF013986.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894297.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683494.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683495.1
COORDINATES: similar to AA sequence:RefSeq:WP_012682533.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683502.1
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF023249.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683524.1
COORDINATES: protein motif:HMM:NF012602.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF025875.2
COORDINATES: protein motif:HMM:NF012428.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF013256.2
COORDINATES: similar to AA sequence:RefSeq:WP_012682483.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398583.1
COORDINATES: protein motif:HMM:NF003763.0
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021466.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683541.1
COORDINATES: protein motif:HMM:NF014015.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683543.1
COORDINATES: protein motif:HMM:NF014862.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683546.1
COORDINATES: protein motif:HMM:TIGR02289.1
COORDINATES: protein motif:HMM:NF024879.2
glycine zipper domain-containing protein
COORDINATES: protein motif:HMM:NF008913.0
GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012683600.1
COORDINATES: similar to AA sequence:RefSeq:WP_003900322.1
COORDINATES: similar to AA sequence:RefSeq:WP_012681506.1
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683608.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683611.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006570 - tyrosine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683612.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012682551.1
phenylacetic acid degradation bifunctional protein PaaZ
COORDINATES: similar to AA sequence:RefSeq:WP_012682550.1
transferase hexapeptide repeat family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001206197.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00369.1
GO:0010124 - phenylacetate catabolic process [Evidence IEA]
hydroxyphenylacetyl-CoA thioesterase PaaI
COORDINATES: similar to AA sequence:RefSeq:WP_012682547.1
GO:0070403 - NAD+ binding [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF006009.0
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG
COORDINATES: similar to AA sequence:RefSeq:WP_012682545.1
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001189201.1
phenylacetate-CoA oxygenase subunit PaaJ
COORDINATES: similar to AA sequence:RefSeq:WP_012681755.1
phenylacetate-CoA oxygenase subunit PaaC
COORDINATES: similar to AA sequence:RefSeq:WP_003857353.1
1,2-phenylacetyl-CoA epoxidase subunit B
COORDINATES: protein motif:HMM:NF010350.0
GO:0097266 - phenylacetyl-CoA 1,2-epoxidase activity [Evidence IEA]
1,2-phenylacetyl-CoA epoxidase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_012682542.1
COORDINATES: protein motif:HMM:NF006829.0
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012683620.1
COORDINATES: protein motif:HMM:NF021445.2
COORDINATES: protein motif:HMM:TIGR02032.1
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683633.1
COORDINATES: protein motif:HMM:TIGR01420.1
type IV pilus twitching motility protein PilT
COORDINATES: protein motif:HMM:NF016084.2
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF025002.2
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683641.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683649.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF037183.2
permease-like cell division protein FtsX
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:TIGR00914.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_000344297.1
COORDINATES: protein motif:HMM:NF019149.2
COORDINATES: protein motif:HMM:NF037501.2
Swt1 family HEPN domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002443355.1
COORDINATES: similar to AA sequence:RefSeq:WP_012683655.1
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_012682472.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: protein motif:HMM:NF001503.0
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: similar to AA sequence:RefSeq:WP_003021871.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_012683708.1
GO:0034028 - 5-(carboxyamino)imidazole ribonucleotide synthase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004082978.1
COORDINATES: protein motif:HMM:NF012309.2
COORDINATES: protein motif:HMM:NF019845.2
glutathione-dependent formaldehyde dehydrogenase
COORDINATES: protein motif:HMM:TIGR01382.1
COORDINATES: protein motif:HMM:NF023125.2
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_000094141.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF024846.2
COORDINATES: protein motif:HMM:TIGR01561.1
COORDINATES: protein motif:HMM:TIGR02094.1
COORDINATES: protein motif:HMM:TIGR02401.1
GO:0047470 - (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00217.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894521.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02456.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023324.2
alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase
COORDINATES: protein motif:HMM:NF000595.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894107.1
COORDINATES: protein motif:HMM:TIGR00088.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015894145.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894158.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016196.2
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894165.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013155.2
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014871.2
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894169.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894170.1
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894183.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894184.1
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894186.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894187.1
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894221.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_015894222.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: protein motif:HMM:TIGR03598.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:NF019241.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:TIGR00564.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: protein motif:HMM:NF018047.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894231.1
COORDINATES: similar to AA sequence:RefSeq:WP_015293283.1
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: protein motif:HMM:NF022100.2
COORDINATES: protein motif:HMM:NF017970.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894238.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:TIGR03990.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894242.1
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013328.2
COORDINATES: protein motif:HMM:TIGR02453.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894249.1
COORDINATES: protein motif:HMM:TIGR01475.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
putative 4-hydroxybenzoate polyprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015894251.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
ubiquinone/menaquinone biosynthesis methyltransferase
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_015894261.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894262.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: protein motif:HMM:NF019896.2
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015894269.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit alpha/FixB family protein
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894282.1
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894288.1
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_001259563.1
COORDINATES: protein motif:HMM:NF016234.2
COORDINATES: protein motif:HMM:NF012439.2
COORDINATES: protein motif:HMM:TIGR01144.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:NF012347.2
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF024102.2
BsuPI-related putative proteinase inhibitor
COORDINATES: similar to AA sequence:RefSeq:WP_015894305.1
COORDINATES: protein motif:HMM:NF013183.2
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894310.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF027567.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894311.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894312.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000550088.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_015894316.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001399.0
COORDINATES: similar to AA sequence:RefSeq:WP_015894319.1
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: protein motif:HMM:NF024966.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894320.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF016264.2
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894323.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012485.2
COORDINATES: protein motif:HMM:NF016253.2
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:TIGR01175.1
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: similar to AA sequence:RefSeq:WP_180375739.1
COORDINATES: protein motif:HMM:NF006718.0
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
penicillin-binding protein activator LpoB
COORDINATES: protein motif:HMM:NF025614.2
CPXCG motif-containing cysteine-rich protein
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF013633.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894350.1
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: similar to AA sequence:RefSeq:WP_012683588.1
COORDINATES: protein motif:HMM:TIGR02779.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013179.2
COORDINATES: protein motif:HMM:NF019850.2
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:TIGR02822.1
COORDINATES: protein motif:HMM:TIGR01783.1
GO:0015343 - siderophore transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF026221.2
GO:0009341 - beta-galactosidase complex [Evidence IEA]
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021505.2
COORDINATES: protein motif:HMM:NF026092.2
COORDINATES: protein motif:HMM:NF005495.0
COORDINATES: protein motif:HMM:NF009131.0
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024215.2
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_015895415.1
COORDINATES: protein motif:HMM:NF000584.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: protein motif:HMM:TIGR00022.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894731.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
alpha-D-glucose phosphate-specific phosphoglucomutase
COORDINATES: protein motif:HMM:NF019339.2
COORDINATES: protein motif:HMM:NF018951.2
COORDINATES: protein motif:HMM:NF012956.2
COORDINATES: protein motif:HMM:NF016563.2
COORDINATES: protein motif:HMM:NF021512.2
COORDINATES: protein motif:HMM:NF024126.2
COORDINATES: protein motif:HMM:NF024764.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894457.1
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF022603.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895121.1
FHA domain-containing serine/threonine-protein kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012682466.1
COORDINATES: protein motif:HMM:NF013488.2
COORDINATES: protein motif:HMM:NF025227.2
COORDINATES: protein motif:HMM:NF012973.2
FHIPEP family type III secretion protein
COORDINATES: protein motif:HMM:NF015863.2
PepSY-associated TM helix domain-containing protein
COORDINATES: protein motif:HMM:NF025687.2
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894379.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894380.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894381.1
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR04189.1
COORDINATES: protein motif:HMM:NF014460.2
COORDINATES: protein motif:HMM:NF014665.2
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894392.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF014049.2
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894402.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894403.1
COORDINATES: protein motif:HMM:NF013725.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF015344.2
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894411.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: protein motif:HMM:NF014705.2
COORDINATES: protein motif:HMM:TIGR00236.1
COORDINATES: protein motif:HMM:TIGR04390.1
YaiO family outer membrane beta-barrel protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682355.1
COORDINATES: similar to AA sequence:RefSeq:WP_170844367.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012683236.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894438.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894439.1
COORDINATES: protein motif:HMM:NF022400.2
COORDINATES: protein motif:HMM:TIGR03916.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:NF036806.2
COORDINATES: protein motif:HMM:NF012922.2
COORDINATES: protein motif:HMM:NF016056.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894447.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894448.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894449.1
COORDINATES: protein motif:HMM:NF012457.2
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: protein motif:HMM:NF025049.2
COORDINATES: similar to AA sequence:RefSeq:WP_015895553.1
COORDINATES: protein motif:HMM:NF019499.2
vitamin K epoxide reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012682700.1
COORDINATES: similar to AA sequence:RefSeq:WP_015895416.1
COORDINATES: protein motif:HMM:NF000818.0
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_015894404.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012964.2
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00562.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018066.2
acetoacetate decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012681663.1
COORDINATES: protein motif:HMM:NF012588.2
COORDINATES: protein motif:HMM:TIGR02946.1
wax ester/triacylglycerol synthase family O-acyltransferase
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004526.0
COORDINATES: protein motif:HMM:NF016894.2
COORDINATES: protein motif:HMM:NF006600.0
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
COORDINATES: protein motif:HMM:NF010624.0
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - cellular amino acid catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012272.2
COORDINATES: protein motif:HMM:NF023569.2
COORDINATES: protein motif:HMM:NF025625.2
COORDINATES: protein motif:HMM:NF022019.2
COORDINATES: protein motif:HMM:NF023726.2
COORDINATES: protein motif:HMM:NF020811.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF022150.2
COORDINATES: protein motif:HMM:NF005214.0
COORDINATES: similar to AA sequence:RefSeq:WP_015894506.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:NF021486.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894510.1
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894512.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894513.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894515.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014193.2
helix-turn-helix domain-containing GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015894523.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015894525.1
COORDINATES: protein motif:HMM:NF036772.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894540.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_003113240.1
COORDINATES: protein motif:HMM:NF016130.2
COORDINATES: protein motif:HMM:TIGR01970.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020442.2
COORDINATES: protein motif:HMM:NF019040.2
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: protein motif:HMM:NF040576.1
COORDINATES: protein motif:HMM:NF015867.2
COORDINATES: protein motif:HMM:NF023444.2
GO:0015627 - type II protein secretion system complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF013722.2
COORDINATES: protein motif:HMM:NF016141.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894566.1
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894567.1
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: protein motif:HMM:NF027482.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894569.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: protein motif:HMM:NF018984.2
CGNR zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015894575.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894579.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006421.0
COORDINATES: similar to AA sequence:RefSeq:WP_015894581.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894588.1
COORDINATES: protein motif:HMM:NF012601.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894596.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014851.2
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: protein motif:HMM:NF008724.0
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025637.2
HNH endonuclease signature motif containing protein
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:NF027637.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894608.1
dehydrogenase E1 component subunit alpha/beta
COORDINATES: protein motif:HMM:NF025729.2
COORDINATES: similar to AA sequence:RefSeq:WP_015894615.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894620.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894621.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894624.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894633.1
COORDINATES: protein motif:HMM:TIGR00858.1
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004624.0
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894654.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894656.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001753.0
COORDINATES: protein motif:HMM:NF008629.1
GO:0004519 - endonuclease activity [Evidence IEA]
cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015576101.1
COORDINATES: protein motif:HMM:TIGR01312.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02631.1
GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019130.2
alpha-glucuronidase family glycosyl hydrolase
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: protein motif:HMM:NF027309.2
COORDINATES: protein motif:HMM:NF012551.2
COORDINATES: protein motif:HMM:TIGR00792.1
COORDINATES: protein motif:HMM:NF015585.2
beta galactosidase jelly roll domain-containing protein
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: protein motif:HMM:NF027814.2
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_015894664.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894667.1
COORDINATES: similar to AA sequence:RefSeq:WP_015894668.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013395.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015894669.1
glycerol-3-phosphate dehydrogenase/oxidase