Gemmatirosa kalamazoonensis strain KBS708 extrachromosomal.
type: Entry
definition: Gemmatirosa kalamazoonensis strain KBS708 extrachromosomal.
sequence version: NZ_CP007127.1
sequence date: 2022-09-18
sequence: sequence
division: CON
label: NZ_CP007127.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02641636
keyword: RefSeq
source: Gemmatirosa kalamazoonensis
organism: Gemmatirosa kalamazoonensis
taxonomy: Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatirosa.
reference: 1
references: 24699952
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP007127.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Assembly-Data-START##\nAssembly Method :: Hierarchical Genome Assembly Process v.\n 2013\nCoverage :: 118\nSequencing Technology :: 454; Illumina; PacBio\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/18/2022 14:48:47\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 6,447\nCDSs (total) :: 6,388\nGenes (coding) :: 6,323\nCDSs (with protein) :: 6,323\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 65\nCDSs (without protein) :: 65\nPseudo Genes (ambiguous residues) :: 0 of 65\nPseudo Genes (frameshifted) :: 9 of 65\nPseudo Genes (incomplete) :: 59 of 65\nPseudo Genes (internal stop) :: 0 of 65\nPseudo Genes (multiple problems) :: 3 of 65\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000353
sequence length: 20952
topology: circular
so has quality: SO_0000988
location: 1..20952
location: region:1-20952:1
RO_0002162: 861299

NZ_CP007127
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02641636
type: BioSample
SIO_000068: biosample

1
title: Genome Sequence and Methylome of Soil Bacterium Gemmatirosa kalamazoonensis KBS708T, a Member of the Rarely Cultivated Gemmatimonadetes Phylum
author: Debruyn, J.M.
author: Radosevich, M.
author: Wommack, K.E.
author: Polson, S.W.
author: Hauser, L.J.
author: Fawaz, M.N.
author: Korlach, J.
author: Tsai, Y.C.
journal: Genome Announc 2 (2), e00226-14 (2014)
pubmed: 24699952
comments: Publication Status: Online-Only

24699952
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: DeBruyn, J.M.
author: Radosevich, M.
author: Wommack, K.Eric.
author: Polson, S.
author: Hauser, L.J.
author: Fawaz, M.N.
author: Korlach, J.
author: Tsai, Y.-C.
journal: Submitted (23-DEC-2013) Department of Biosystems Engineering & Soil Science, University of Tennessee, 2506 EJ Chapman Drive, Knoxville, TN 37996, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20952:1
position: 20952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20952:1:source
so part of: sequence
organism: Gemmatirosa kalamazoonensis
mol type: genomic DNA
strain: KBS708
culture collection: ATCC:BAA-2150
type material: type strain of Gemmatirosa kalamazoonensis
note: extrachromosomal phage-like extrachromosal element

861299
type: Taxonomy
SIO_000068: taxonomy

J421_RS31895
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS31895
so part of: sequence
location: join(20758..20952,1..291)
location: region:1-20952:1
so has part: feature:20758-20952:1:exon
so has part: feature:1-291:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:20758-20952:1:exon

position:20758:1
position: 20758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-291:1:exon

position:291:1
position: 291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

J421_RS31895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS31895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFVSGRASVGMVGRSSVGRSWEGPEPDYANLGRRQPRCKSLRPNDPDTDPTGPACLTLLAEWIVEPLLDGRCSGGIERLWEELSDEELYVFITAGFRRELILLNRAPDMQRARQVGAATPADLRTHVPLWDATTFRLEEAQRAVSAASRQRGGARNRRSR
SIO_010081: J421_RS31895
subclass of: SO_0000673
so part of: J421_RS31895
location: join(20758..20952,1..291)
location: region:1-20952:1
so has part: feature:20758-20952:1:exon
so has part: feature:1-291:1:exon

WP_158508614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20758-20952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-291:1:exon

J421_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00010
old locus tag: J421_0001
so part of: sequence
location: complement(298..597)
location: region:298-597:-1
so has part: feature:298-597:-1:exon
subclass of: SO_0000010

position:298:-1
position: 298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597:-1
position: 597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298-597:-1:exon

J421_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00010
old locus tag: J421_0001
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRHETDPMECEARGVYVARLRVGGRVRVVAMGHDGELVAECYVAPCADVWPAIDALRTVLDTLDPPRRPALGVVRGCADASCRARRRAAAHALSLVGR
SIO_010081: J421_RS00010
subclass of: SO_0000673
so part of: J421_RS00010
location: complement(298..597)
location: region:298-597:-1
so has part: feature:298-597:-1:exon

WP_025409130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298-597:-1:exon

J421_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00015
old locus tag: J421_0002
so part of: sequence
location: complement(591..872)
location: region:591-872:-1
so has part: feature:591-872:-1:exon
subclass of: SO_0000010

position:591:-1
position: 591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872:-1
position: 872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591-872:-1:exon

J421_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00015
old locus tag: J421_0002
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPALTVSRGAPTLAAAAGRERGGELLERGVYLAPYLRDGRPVLLAIDDAGELRAARTVPADWPLVRAIGALEAQLERIAPSRAPRRVELVVC
SIO_010081: J421_RS00015
subclass of: SO_0000673
so part of: J421_RS00015
location: complement(591..872)
location: region:591-872:-1
so has part: feature:591-872:-1:exon

WP_148306063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591-872:-1:exon

J421_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00020
old locus tag: J421_0003
so part of: sequence
location: complement(869..1249)
location: region:869-1249:-1
so has part: feature:869-1249:-1:exon
subclass of: SO_0000010

position:869:-1
position: 869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249:-1
position: 1249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869-1249:-1:exon

J421_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00020
old locus tag: J421_0003
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRALTLSRDGASARFGHAPRARRAPTAPTAPSVPPTSFAPFASLGPIVLRAECAICGPFAAAPGDLILVRPGAGRPVVLQRELPEDYAALRSLVAGGALNALETSPTEAARVLRVLALSVQETDR
SIO_010081: J421_RS00020
subclass of: SO_0000673
so part of: J421_RS00020
location: complement(869..1249)
location: region:869-1249:-1
so has part: feature:869-1249:-1:exon

WP_025409132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:869-1249:-1:exon

J421_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00025
old locus tag: J421_0004
so part of: sequence
location: complement(1246..1452)
location: region:1246-1452:-1
so has part: feature:1246-1452:-1:exon
subclass of: SO_0000010

position:1246:-1
position: 1246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452:-1
position: 1452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246-1452:-1:exon

J421_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00025
old locus tag: J421_0004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRALLRLTTSAPASPARLSQGTYVVAKDLPAAGLQRGDRILVSPRGRVSLLRTITVEQLALAVQETDR
SIO_010081: J421_RS00025
subclass of: SO_0000673
so part of: J421_RS00025
location: complement(1246..1452)
location: region:1246-1452:-1
so has part: feature:1246-1452:-1:exon

WP_025409133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1246-1452:-1:exon

J421_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00030
old locus tag: J421_0005
so part of: sequence
location: complement(1454..1807)
location: region:1454-1807:-1
so has part: feature:1454-1807:-1:exon
subclass of: SO_0000010

position:1454:-1
position: 1454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807:-1
position: 1807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1454-1807:-1:exon

J421_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00030
old locus tag: J421_0005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTPPAVPTIADVERELLAEFGPYHIGPIYYASADDAARARRLEAERRVAHAARVAAYLASHPRDCVWCGAPIGAAPFTMVGLEPMHVGRCQDQFHALAYGNDGDEHGVDALELEAA
SIO_010081: J421_RS00030
subclass of: SO_0000673
so part of: J421_RS00030
location: complement(1454..1807)
location: region:1454-1807:-1
so has part: feature:1454-1807:-1:exon

WP_025409134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1454-1807:-1:exon

J421_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00035
old locus tag: J421_0006
so part of: sequence
location: 2011..2232
location: region:2011-2232:1
so has part: feature:2011-2232:1:exon
subclass of: SO_0000010

position:2011:1
position: 2011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2232:1
position: 2232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2011-2232:1:exon

J421_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00035
old locus tag: J421_0006
inference: COORDINATES: protein motif:HMM:NF024835.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIRFRLREVREQRELTQLELAERVGVRQATISDLETGRAKTLRLTLLDALCNALQAEPAELIEYDPPKRRKSA
SIO_010081: J421_RS00035
subclass of: SO_0000673
so part of: J421_RS00035
location: 2011..2232
location: region:2011-2232:1
so has part: feature:2011-2232:1:exon

WP_025409135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2011-2232:1:exon

J421_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00040
old locus tag: J421_0007
so part of: sequence
location: 2251..2520
location: region:2251-2520:1
so has part: feature:2251-2520:1:exon
subclass of: SO_0000010

position:2251:1
position: 2251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520:1
position: 2520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2251-2520:1:exon

J421_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00040
old locus tag: J421_0007
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRYALEIYEPGTTQDVLVYFESDTPFQAISRGDLLGAGAWGGSGYNLGDMLRVVGIEHIVIESSPAPMHKVCVFTENVDDGRAARRGQ
SIO_010081: J421_RS00040
subclass of: SO_0000673
so part of: J421_RS00040
location: 2251..2520
location: region:2251-2520:1
so has part: feature:2251-2520:1:exon

WP_025409136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2251-2520:1:exon

J421_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00045
old locus tag: J421_0008
so part of: sequence
location: 2547..2825
location: region:2547-2825:1
so has part: feature:2547-2825:1:exon
subclass of: SO_0000010

position:2547:1
position: 2547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2825:1
position: 2825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2547-2825:1:exon

J421_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00045
old locus tag: J421_0008
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDAADGRRDRWSARVMAVAAARLELLGADRDALRATPCDALAAEAERLAALVILEHGRDAAHALQLLDVLRELVHRLATEPAQAAPLRRSA
SIO_010081: J421_RS00045
subclass of: SO_0000673
so part of: J421_RS00045
location: 2547..2825
location: region:2547-2825:1
so has part: feature:2547-2825:1:exon

WP_148306064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2547-2825:1:exon

J421_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00050
old locus tag: J421_0009
so part of: sequence
location: 2822..3964
location: region:2822-3964:1
so has part: feature:2822-3964:1:exon
subclass of: SO_0000010

position:2822:1
position: 2822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3964:1
position: 3964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2822-3964:1:exon

J421_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00050
old locus tag: J421_0009
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPRAVPSIGSADDVLRYMARALEARGEPLGLNARVDFEPLFAAFRAGDLPHFMVHFDNAERAHGWIQHIPGSGLQVQFTPRGFERVGHLVMPARDVEIAARVAADRFAEALAALPAELKALQASETRVGMLHSGRHTLGATRLVEEAAERGFRAALEAWLQVLRRRSIEPSAELVATIVASIGDAFDASEPTLRHPFVSLERLGRLLRAPDAILADAKAKGLAFIQSELSLEAIAPGAPAESHRAPNASLSAGDHNISLVIHGDVGVVQAGAGAQASVTMQPDALDALRDSLEQLRGLLEAQESDAGSEGSTSMVGPIKETVDAAIVESRKPTPNPITMRGLLVGIATAVQTIGAAPQAYELARLAARHFGVELPQLH
SIO_010081: J421_RS00050
subclass of: SO_0000673
so part of: J421_RS00050
location: 2822..3964
location: region:2822-3964:1
so has part: feature:2822-3964:1:exon

WP_148306065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2822-3964:1:exon

J421_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00055
old locus tag: J421_0010
so part of: sequence
location: complement(4050..4355)
location: region:4050-4355:-1
so has part: feature:4050-4355:-1:exon
subclass of: SO_0000010

position:4050:-1
position: 4050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4355:-1
position: 4355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050-4355:-1:exon

J421_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00055
old locus tag: J421_0010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTPNVPDVADLPDHVRHELQRIATDPPEVHAPELNAAGAALWNVYRDFKTRRDGRAFAAEFTDHRGTKQVIRGSSYGELYRRAARRYLGMSDDGAADSRA
SIO_010081: J421_RS00055
subclass of: SO_0000673
so part of: J421_RS00055
location: complement(4050..4355)
location: region:4050-4355:-1
so has part: feature:4050-4355:-1:exon

WP_148306066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4050-4355:-1:exon

J421_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00060
old locus tag: J421_0011
so part of: sequence
location: complement(4386..5795)
location: region:4386-5795:-1
so has part: feature:4386-5795:-1:exon
subclass of: SO_0000010

position:4386:-1
position: 4386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5795:-1
position: 5795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4386-5795:-1:exon

J421_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00060
old locus tag: J421_0011
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase arm-type DNA-binding domain-containing protein
translation: MPTLARPLTKRTIDATAPQPSRDVFLWDGGDGAVKGFGLRVRPSGRKTFVFQYDDVGGRTRRLTLGEFGPMTVDQARAAARDAYAAAVAARRDPAVRDPATRAKAAKVEARAERLAPTVRDLATRYLEDRARKGKRARTIAQFTDIVERLIAPKLGARKLQDVTRRDVAQLHHELGDRPYMANRVLTVLHAMFAYAEREELRPAHTNPAAHIERYPERSRARGVPDAQYAAIGTALRRAAADGLRLPPELRAPSQRPAVAKRAAREAAGLKVRPVRPTPWDPRLVALFRFLALSGWRESEARALRWADVDLARGVATLQETKSGKSVRPLGAAAIAVLRGLEADAGSPYVFPGARPVTPARPARPRSRPGTEWAIVRHAAGLGMAKDGALTLHGLRHGFTTVARGLGYGDHVIAVLIGHTVGSTMTSRYGAVPDVLVRKAADDVAREIAALLDADLTPAKVLPITRREA
SIO_010081: J421_RS00060
subclass of: SO_0000673
so part of: J421_RS00060
location: complement(4386..5795)
location: region:4386-5795:-1
so has part: feature:4386-5795:-1:exon

WP_025409140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4386-5795:-1:exon

J421_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00065
old locus tag: J421_0012
so part of: sequence
location: complement(6006..6209)
location: region:6006-6209:-1
so has part: feature:6006-6209:-1:exon
subclass of: SO_0000010

position:6006:-1
position: 6006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6209:-1
position: 6209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006-6209:-1:exon

J421_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00065
old locus tag: J421_0012
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFLSPADLDALIYALLTRSQLAEDERRALILELVSRRRTGETGARPSHDLPKSAATLDSPNGPSRK
SIO_010081: J421_RS00065
subclass of: SO_0000673
so part of: J421_RS00065
location: complement(6006..6209)
location: region:6006-6209:-1
so has part: feature:6006-6209:-1:exon

WP_025409141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6006-6209:-1:exon

J421_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00070
old locus tag: J421_0013
so part of: sequence
location: complement(6323..9397)
location: region:6323-9397:-1
so has part: feature:6323-9397:-1:exon
subclass of: SO_0000010

position:6323:-1
position: 6323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9397:-1
position: 9397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6323-9397:-1:exon

J421_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00070
old locus tag: J421_0013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVVAGPGIAFAIDSRPAEEGRDRVVRAFSDIQGGARSAASGVDQANNALNNLGAGGSRASTATRGAADGLGKLSAAGAGASNTALSLTHAFNGLAASSLGLNQSLGTLAGNLLPFAIGQTATAGVLLGVTAMARAWDAYSESADRAAKATKEAAEKMQQSIDNLVNSGSFEKLAQQYRDATLGTRAHGGADGLNALVASRAQLEAERARLRQKTAGQGAFSAGEDLAGVQNLGDPTVSRIKSLTSAIDAIDQKIIAASAQAEQAYQAIFNPNNGLTTAERGLPIVVTAKSLTAEYREHKKELKEIADTIKRYDEGLKKIAADEERVRAADRRKAAGVLNDNALDASIAKDLRTVGEQRRAFEASINADAQHALGLMSTTLLQSFDETLDQLAGGPFYRSVANGLADAVGQGVVRGLETGTLGGREFWQSIGHMGEQLVGDALQRALSKVSKADVGKYGGAALAGGFAGYGIGYGTGNAAEGFVGGAVGGALTGASVGGVPGAVVGGLVGALAGLTGAHRKAQEAAEAMARAQEAYVANFESFDRAMRGTGTALEDAQAAIRAQADKLRADAAEVFKGSAFRDNQALIASKTNAITAAEAAGLQRNALEFAQSKFDFFEQQRAEQLRLRGLAEEADAIERQVANTKELADAIKLYGADVRDTVLATQQAREEERRKQEAAAAEAARAQAFEDERAREFQRGADAAANATRDKQAADAERDRAKSLEDYNRASREDLHYRQLVAQGRTAEADAYQRRIHDERELGDAILHGADAATQAEIIYTEAMEAQAAATKRAADAARAAAAAESSLASSRLDLLAQRNGALGIDPTLGLQQQAALAMLNGNAARALDGANIADPASLTSAIDAWLKEALDPARLGQADQDTLNDLRDTASTLLNLRSAAKALGGNAGLAGFQAAGGLSVQHSDVIKDSLASAFTGFSVSQANESNGLARTANAYLLRIADNTDALKFFDGFTSGWTGELTVTVRAAPGTGRDSRQIVDELDRRLNGRLRMQERAGGRSSIT
SIO_010081: J421_RS00070
subclass of: SO_0000673
so part of: J421_RS00070
location: complement(6323..9397)
location: region:6323-9397:-1
so has part: feature:6323-9397:-1:exon

WP_025409142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6323-9397:-1:exon

J421_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00075
old locus tag: J421_0014
so part of: sequence
location: complement(9409..10047)
location: region:9409-10047:-1
so has part: feature:9409-10047:-1:exon
subclass of: SO_0000010

position:9409:-1
position: 9409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10047:-1
position: 10047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9409-10047:-1:exon

J421_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00075
old locus tag: J421_0014
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTTHPAGTDAGQSSPIDVDERRSAAADALSAARAELARRELLLKQAAAAVGAAERRADVAVLDPSTDHAAVSELAAAQARHTTLARTVEQARVAVERAATYQTRVEQAAVYARAAQVGEAILADAAHVADAMAALDAALGAVDAHVAELARIIGSRPGDSQVPHQLAKQLRTTPAARVVAYARDAMAHLRGTIAAQAHFPPVPSAPVPNSN
SIO_010081: J421_RS00075
subclass of: SO_0000673
so part of: J421_RS00075
location: complement(9409..10047)
location: region:9409-10047:-1
so has part: feature:9409-10047:-1:exon

WP_025409143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9409-10047:-1:exon

J421_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00080
old locus tag: J421_0015
so part of: sequence
location: complement(10062..10451)
location: region:10062-10451:-1
so has part: feature:10062-10451:-1:exon
subclass of: SO_0000010

position:10062:-1
position: 10062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10451:-1
position: 10451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10062-10451:-1:exon

J421_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00080
old locus tag: J421_0015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDSDIWAGWSGEERAEYSRVLRTGGVTSADAYARSVTERLEEQARTADATAARAAELERIRSGGRPAAVNPRDVVAMSKYMGEIGRGEIAIREDAPLLSDPAARRSCSRRDMGQYIDEIARGEIIVTD
SIO_010081: J421_RS00080
subclass of: SO_0000673
so part of: J421_RS00080
location: complement(10062..10451)
location: region:10062-10451:-1
so has part: feature:10062-10451:-1:exon

WP_025409144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10062-10451:-1:exon

J421_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00085
old locus tag: J421_0016
so part of: sequence
location: complement(10550..10915)
location: region:10550-10915:-1
so has part: feature:10550-10915:-1:exon
subclass of: SO_0000010

position:10550:-1
position: 10550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10915:-1
position: 10915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10550-10915:-1:exon

J421_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00085
old locus tag: J421_0016
inference: COORDINATES: protein motif:HMM:NF012422.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MPTRAVVELRRPLTPAQTRVLELLVEAPGYKIIADTLGCSKRTVREHIAAIAATLPEDFAPSGQPKERATLYAMRVWALEQIARARAARRGRRRQHVKKSPAESSNLYRASRLVPLSRGPP
SIO_010081: J421_RS00085
subclass of: SO_0000673
so part of: J421_RS00085
location: complement(10550..10915)
location: region:10550-10915:-1
so has part: feature:10550-10915:-1:exon

WP_025409145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10550-10915:-1:exon

J421_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00090
old locus tag: J421_0017
so part of: sequence
location: complement(10917..11144)
location: region:10917-11144:-1
so has part: feature:10917-11144:-1:exon
subclass of: SO_0000010

position:10917:-1
position: 10917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11144:-1
position: 11144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10917-11144:-1:exon

J421_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00090
old locus tag: J421_0017
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTERELAAYRDRLCAADTVADVERLLAELSELSELSALLGDAPAVRVLRQEADEWRAFLWQLHGPRGHGLRGAQG
SIO_010081: J421_RS00090
subclass of: SO_0000673
so part of: J421_RS00090
location: complement(10917..11144)
location: region:10917-11144:-1
so has part: feature:10917-11144:-1:exon

WP_025409146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10917-11144:-1:exon

J421_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00095
old locus tag: J421_0018
so part of: sequence
location: complement(11141..11557)
location: region:11141-11557:-1
so has part: feature:11141-11557:-1:exon
subclass of: SO_0000010

position:11141:-1
position: 11141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11557:-1
position: 11557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11141-11557:-1:exon

J421_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00095
old locus tag: J421_0018
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRRFENLRKPQIGSQNVIKPHIAHDSAESGETAPEASGAPRKTALHEHRLLSAEALARAMATAGLSLAQVLQATARRGLNAFTPLNTAVRWKTDAYVRADVLEALSELLHVPKPFLSPQIRRWDAEDYARARGRRGA
SIO_010081: J421_RS00095
subclass of: SO_0000673
so part of: J421_RS00095
location: complement(11141..11557)
location: region:11141-11557:-1
so has part: feature:11141-11557:-1:exon

WP_148306067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11141-11557:-1:exon

J421_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00100
old locus tag: J421_0019
so part of: sequence
location: complement(11833..13224)
location: region:11833-13224:-1
so has part: feature:11833-13224:-1:exon
subclass of: SO_0000010

position:11833:-1
position: 11833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13224:-1
position: 13224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11833-13224:-1:exon

J421_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00100
old locus tag: J421_0019
inference: COORDINATES: protein motif:HMM:NF040238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5906 domain-containing protein
translation: MTARHRPPLLVEGERAARDIGRMNGRAGVRTIRPVDPLITEFNATHAVVLVGGEPAVLCEEAGRDGRPTVRLLSVRAFREWLRPRRADVDRWLASRDRREYPRGVVFEPDAEIAGAFNLWRGFAVEPDPAPHPEERCARFLEHLYENICQSDERLFEWVVGWLAQIVQSPRTKLGTSLFLRGKQGTGKTKVGEAMRRLLGRHYMLVSDPRYVVGRFNAHLESLLLLHADEAFFAGDPTAVGRLKDLVTGHEQVVERKGREPVVVSNYVRLLGTADSVWVVPANERERRFAVIDVGDAHERDFPYFAAIDRELDAGGASALLAYLLAYDLSALQLRQIPETPALIDQKVRSLAPEAAWWLDVLKRGELPASRFRDGRTCEVSRLVDDYIEHAQRRGTPRRASEVVLGGFLSKQVPGVERVRRTAPDGTRPWAYVFPSLAECRQTAPATFRGWNDPAADWKPADG
SIO_010081: J421_RS00100
subclass of: SO_0000673
so part of: J421_RS00100
location: complement(11833..13224)
location: region:11833-13224:-1
so has part: feature:11833-13224:-1:exon

WP_148306068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11833-13224:-1:exon

J421_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00105
old locus tag: J421_0020
so part of: sequence
location: complement(13221..13493)
location: region:13221-13493:-1
so has part: feature:13221-13493:-1:exon
subclass of: SO_0000010

position:13221:-1
position: 13221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13493:-1
position: 13493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13221-13493:-1:exon

J421_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00105
old locus tag: J421_0020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARRTEGSRVTPRQRPRLLGALALWRRELAAGTRTMATEDALAQAARCEATALECFADGDQATAQRMLERAAARLIQHRAAVREAIGRPA
SIO_010081: J421_RS00105
subclass of: SO_0000673
so part of: J421_RS00105
location: complement(13221..13493)
location: region:13221-13493:-1
so has part: feature:13221-13493:-1:exon

WP_025409149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13221-13493:-1:exon

J421_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00110
old locus tag: J421_0021
so part of: sequence
location: complement(13495..13761)
location: region:13495-13761:-1
so has part: feature:13495-13761:-1:exon
subclass of: SO_0000010

position:13495:-1
position: 13495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13761:-1
position: 13761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13495-13761:-1:exon

J421_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00110
old locus tag: J421_0021
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MPERSDSNKPPAAAAPYTPAVLLTEIDLAQLLGVKPATLRDWRVDGRGPVFVQLGRRVRYRPADVDRWLDEQTRRSTSDPGPRRRRSA
SIO_010081: J421_RS00110
subclass of: SO_0000673
so part of: J421_RS00110
location: complement(13495..13761)
location: region:13495-13761:-1
so has part: feature:13495-13761:-1:exon

WP_025409150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13495-13761:-1:exon

J421_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00115
old locus tag: J421_0022
so part of: sequence
location: complement(13846..14121)
location: region:13846-14121:-1
so has part: feature:13846-14121:-1:exon
subclass of: SO_0000010

position:13846:-1
position: 13846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14121:-1
position: 14121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13846-14121:-1:exon

J421_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00115
old locus tag: J421_0022
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRATTPKPPATSPRDERVPFPRACMMLRLSRDQVMHRLAIGELQGGKELSRWFVTRASIERMLAEGRNTSLRPRPNDRADDRERPRRPAA
SIO_010081: J421_RS00115
subclass of: SO_0000673
so part of: J421_RS00115
location: complement(13846..14121)
location: region:13846-14121:-1
so has part: feature:13846-14121:-1:exon

WP_148306069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13846-14121:-1:exon

J421_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00120
old locus tag: J421_0023
so part of: sequence
location: 14215..15288
location: region:14215-15288:1
so has part: feature:14215-15288:1:exon
subclass of: SO_0000010

position:14215:1
position: 14215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15288:1
position: 15288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14215-15288:1:exon

J421_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00120
old locus tag: J421_0023
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRQSSPASRTPPARRTRVTEYEIADRRRLATILRESIVERGLRTLEEAAQLAGTTKATLSFLLNEKPGALRETTLRGLLELVPEARHSELRDTLLSPFERGLEAVHGAWMARELLPRGVAAYDETPPVLAVWQPDGVHLVAGRGFELLEAAARLWPVPFAIADEDGTVAPRWFSWWMADYAHLMLRLGRIPRVVDATRRFERALIARQHIPASARGQFVRALEGGEDVDASGADETKLDRLRSGHSSSGWRAHHAWIRVLEPLLDGRCSGGIERLWEELSDEELYVFITAGFRRELILLNRAPDMQRARQVGAATPADLRTHVPLWDATTFRLEEAQRAVSAASRQRGGARNRRSR
SIO_010081: J421_RS00120
subclass of: SO_0000673
so part of: J421_RS00120
location: 14215..15288
location: region:14215-15288:1
so has part: feature:14215-15288:1:exon

WP_148306070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14215-15288:1:exon

J421_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00125
old locus tag: J421_0024
so part of: sequence
location: complement(15295..15594)
location: region:15295-15594:-1
so has part: feature:15295-15594:-1:exon
subclass of: SO_0000010

position:15295:-1
position: 15295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15594:-1
position: 15594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15295-15594:-1:exon

J421_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00125
old locus tag: J421_0024
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRHETDPMECEARGVYVARLRVGGRVRVVAMGHDGELVAECYVAPCADVWPAIDALRTVLDTLDPPRRPALGVVRGCADASCRARRRAAAHALSLVGR
SIO_010081: J421_RS00125
subclass of: SO_0000673
so part of: J421_RS00125
location: complement(15295..15594)
location: region:15295-15594:-1
so has part: feature:15295-15594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15295-15594:-1:exon

J421_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00130
old locus tag: J421_0025
so part of: sequence
location: complement(15588..15869)
location: region:15588-15869:-1
so has part: feature:15588-15869:-1:exon
subclass of: SO_0000010

position:15588:-1
position: 15588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15869:-1
position: 15869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15588-15869:-1:exon

J421_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00130
old locus tag: J421_0025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPALTVSRGAPTLAAAAGRERGGELLERGVYLAPYLRDGRPVLLAIDDAGELRAARTVPADWPLVRAIGALEAQLERIAPSRAPRRVELVVC
SIO_010081: J421_RS00130
subclass of: SO_0000673
so part of: J421_RS00130
location: complement(15588..15869)
location: region:15588-15869:-1
so has part: feature:15588-15869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15588-15869:-1:exon

J421_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00135
old locus tag: J421_0026
so part of: sequence
location: complement(15866..16246)
location: region:15866-16246:-1
so has part: feature:15866-16246:-1:exon
subclass of: SO_0000010

position:15866:-1
position: 15866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16246:-1
position: 16246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16246:-1:exon

J421_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00135
old locus tag: J421_0026
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRALTLSRDGASARFGHAPRARRAPTAPTAPSVPPTSFAPFASLGPIVLRAECAICGPFAAAPGDLILVRPGAGRPVVLQRELPEDYAALRSLVAGGALNALETSPTEAARVLRVLALSVQETDR
SIO_010081: J421_RS00135
subclass of: SO_0000673
so part of: J421_RS00135
location: complement(15866..16246)
location: region:15866-16246:-1
so has part: feature:15866-16246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16246:-1:exon

J421_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00140
old locus tag: J421_0027
so part of: sequence
location: complement(16243..16449)
location: region:16243-16449:-1
so has part: feature:16243-16449:-1:exon
subclass of: SO_0000010

position:16243:-1
position: 16243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16449:-1
position: 16449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16243-16449:-1:exon

J421_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00140
old locus tag: J421_0027
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRALLRLTTSAPASPARLSQGTYVVAKDLPAAGLQRGDRILVSPRGRVSLLRTITVEQLALAVQETDR
SIO_010081: J421_RS00140
subclass of: SO_0000673
so part of: J421_RS00140
location: complement(16243..16449)
location: region:16243-16449:-1
so has part: feature:16243-16449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16243-16449:-1:exon

J421_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00145
old locus tag: J421_0028
so part of: sequence
location: complement(16451..16804)
location: region:16451-16804:-1
so has part: feature:16451-16804:-1:exon
subclass of: SO_0000010

position:16451:-1
position: 16451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16804:-1
position: 16804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16451-16804:-1:exon

J421_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00145
old locus tag: J421_0028
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTPPAVPTIADVERELLAEFGPYHIGPIYYASADDAARARRLEAERRVAHAARVAAYLASHPRDCVWCGAPIGAAPFTMVGLEPMHVGRCQDQFHALAYGNDGDEHGVDALELEAA
SIO_010081: J421_RS00145
subclass of: SO_0000673
so part of: J421_RS00145
location: complement(16451..16804)
location: region:16451-16804:-1
so has part: feature:16451-16804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16451-16804:-1:exon

J421_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00150
old locus tag: J421_0029
so part of: sequence
location: 17008..17229
location: region:17008-17229:1
so has part: feature:17008-17229:1:exon
subclass of: SO_0000010

position:17008:1
position: 17008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17229:1
position: 17229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17008-17229:1:exon

J421_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00150
old locus tag: J421_0029
inference: COORDINATES: protein motif:HMM:NF024835.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIRFRLREVREQRELTQLELAERVGVRQATISDLETGRAKTLRLTLLDALCNALQAEPAELIEYDPPKRRKSA
SIO_010081: J421_RS00150
subclass of: SO_0000673
so part of: J421_RS00150
location: 17008..17229
location: region:17008-17229:1
so has part: feature:17008-17229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17008-17229:1:exon

J421_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00155
old locus tag: J421_0030
so part of: sequence
location: 17248..17517
location: region:17248-17517:1
so has part: feature:17248-17517:1:exon
subclass of: SO_0000010

position:17248:1
position: 17248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17517:1
position: 17517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17248-17517:1:exon

J421_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00155
old locus tag: J421_0030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRYALEIYEPGTTQDVLVYFESDTPFQAISRGDLLGAGAWGGSGYNLGDMLRVVGIEHIVIESSPAPMHKVCVFTENVDDGRAARRGQ
SIO_010081: J421_RS00155
subclass of: SO_0000673
so part of: J421_RS00155
location: 17248..17517
location: region:17248-17517:1
so has part: feature:17248-17517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17248-17517:1:exon

J421_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00160
old locus tag: J421_0031
so part of: sequence
location: 17544..17822
location: region:17544-17822:1
so has part: feature:17544-17822:1:exon
subclass of: SO_0000010

position:17544:1
position: 17544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17822:1
position: 17822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17544-17822:1:exon

J421_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00160
old locus tag: J421_0031
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDAADGRRDRWSARVMAVAAARLELLGADRDALRATPCDALAAEAERLAALVILEHGRDAAHALQLLDVLRELVHRLATEPAQAAPLRRSA
SIO_010081: J421_RS00160
subclass of: SO_0000673
so part of: J421_RS00160
location: 17544..17822
location: region:17544-17822:1
so has part: feature:17544-17822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17544-17822:1:exon

J421_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00165
old locus tag: J421_0032
so part of: sequence
location: 17819..18961
location: region:17819-18961:1
so has part: feature:17819-18961:1:exon
subclass of: SO_0000010

position:17819:1
position: 17819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18961:1
position: 18961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17819-18961:1:exon

J421_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00165
old locus tag: J421_0032
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPRAVPSIGSADDVLRYMARALEARGEPLGLNARVDFEPLFAAFRAGDLPHFMVHFDNAERAHGWIQHIPGSGLQVQFTPRGFERVGHLVMPARDVEIAARVAADRFAEALAALPAELKALQASETRVGMLHSGRHTLGATRLVEEAAERGFRAALEAWLQVLRRRSIEPSAELVATIVASIGDAFDASEPTLRHPFVSLERLGRLLRAPDAILADAKAKGLAFIQSELSLEAIAPGAPAESHRAPNASLSAGDHNISLVIHGDVGVVQAGAGAQASVTMQPDALDALRDSLEQLRGLLEAQESDAGSEGSTSMVGPIKETVDAAIVESRKPTPNPITMRGLLVGIATAVQTIGAAPQAYELARLAARHFGVELPQLH
SIO_010081: J421_RS00165
subclass of: SO_0000673
so part of: J421_RS00165
location: 17819..18961
location: region:17819-18961:1
so has part: feature:17819-18961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17819-18961:1:exon

J421_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00170
old locus tag: J421_0033
so part of: sequence
location: complement(19047..19352)
location: region:19047-19352:-1
so has part: feature:19047-19352:-1:exon
subclass of: SO_0000010

position:19047:-1
position: 19047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19352:-1
position: 19352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19047-19352:-1:exon

J421_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00170
old locus tag: J421_0033
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTPNVPDVADLPDHVRHELQRIATDPPEVHAPELNAAGAALWNVYRDFKTRRDGRAFAAEFTDHRGTKQVIRGSSYGELYRRAARRYLGMSDDGAADSRA
SIO_010081: J421_RS00170
subclass of: SO_0000673
so part of: J421_RS00170
location: complement(19047..19352)
location: region:19047-19352:-1
so has part: feature:19047-19352:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19047-19352:-1:exon

J421_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 861299
locus tag: J421_RS00175
old locus tag: J421_0034
so part of: sequence
location: complement(19383..20792)
location: region:19383-20792:-1
so has part: feature:19383-20792:-1:exon
subclass of: SO_0000010

position:19383:-1
position: 19383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20792:-1
position: 20792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19383-20792:-1:exon

J421_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861299
locus tag: J421_RS00175
old locus tag: J421_0034
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase arm-type DNA-binding domain-containing protein
translation: MPTLARPLTKRTIDATAPQPSRDVFLWDGGDGAVKGFGLRVRPSGRKTFVFQYDDVGGRTRRLTLGEFGPMTVDQARAAARDAYAAAVAARRDPAVRDPATRAKAAKVEARAERLAPTVRDLATRYLEDRARKGKRARTIAQFTDIVERLIAPKLGARKLQDVTRRDVAQLHHELGDRPYMANRVLTVLHAMFAYAEREELRPAHTNPAAHIERYPERSRARGVPDAQYAAIGTALRRAAADGLRLPPELRAPSQRPAVAKRAAREAAGLKVRPVRPTPWDPRLVALFRFLALSGWRESEARALRWADVDLARGVATLQETKSGKSVRPLGAAAIAVLRGLEADAGSPYVFPGARPVTPARPARPRSRPGTEWAIVRHAAGLGMAKDGALTLHGLRHGFTTVARGLGYGDHVIAVLIGHTVGSTMTSRYGAVPDVLVRKAADDVAREIAALLDADLTPAKVLPITRREA
SIO_010081: J421_RS00175
subclass of: SO_0000673
so part of: J421_RS00175
location: complement(19383..20792)
location: region:19383-20792:-1
so has part: feature:19383-20792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19383-20792:-1:exon