Sphingobium indicum B90A plasmid pSRL3, complete sequence.
type: Entry
definition: Sphingobium indicum B90A plasmid pSRL3, complete sequence.
sequence version: NZ_CP013073.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP013073.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02471717
keyword: RefSeq
source: Sphingobium indicum B90A
organism: Sphingobium indicum B90A
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.
reference: 1
references: 22843598
reference: 2
reference: 3
reference: 4
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP013073.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. unspecified\nGenome Coverage :: 397x\nSequencing Technology :: SMRT\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 02:59:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,833\nCDSs (total) :: 3,772\nGenes (coding) :: 3,710\nCDSs (with protein) :: 3,710\nGenes (RNA) :: 61\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 3\nPseudo Genes (total) :: 62\nCDSs (without protein) :: 62\nPseudo Genes (ambiguous residues) :: 0 of 62\nPseudo Genes (frameshifted) :: 20 of 62\nPseudo Genes (incomplete) :: 46 of 62\nPseudo Genes (internal stop) :: 5 of 62\nPseudo Genes (multiple problems) :: 8 of 62\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 43761
topology: circular
so has quality: SO_0000988
location: 1..43761
location: region:1-43761:1
RO_0002162: 861109

NZ_CP013073
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02471717
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Sphingobium indicum B90A, a hexachlorocyclohexane-degrading bacterium
author: Anand, S.
author: Sangwan, N.
author: Lata, P.
author: Kaur, J.
author: Dua, A.
author: Singh, A.K.
author: Verma, M.
author: Khurana, J.P.
author: Khurana, P.
author: Mathur, S.
author: Lal, R.
journal: J Bacteriol
volume: 194
issue: 16
pages: 4471-4472
year: 2012
pubmed: 22843598

22843598
type: PubMed
SIO_000068: pubmed

2
title: Complete Genome Sequence of Sphingobium indicum B90A
author: Verma, H.
author: Kumar, R.
author: Bajaj, A.
author: Rani, P.
author: Lal, R.
journal: Unpublished

3
title: Direct Submission
author: Verma, H.
author: Kumar, R.
author: Bajaj, A.
author: Rani, P.
author: Lal, R.
journal: Submitted (28-OCT-2015) Department of Zoology, University of Delhi, Room no. 115, Molecular Biology Laboratory, Department of Zoology, University of Delhi, Delhi, Delhi 110007, India

4
title: Direct Submission
author: Lal, R.
author: Anand, S.
author: Lata, P.
author: Sangwan, N.
author: Kaur, J.
author: Dua, A.
author: Singh, A.K.
author: Verma, M.
author: Khurana, J.P.
author: Khurana, P.
author: Raghuvanshi, S.
journal: Submitted (17-MAY-2012) Molecular Biology Laboratory, Department of Zoology, University of Delhi, Delhi, Delhi 110007, India

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43761:1
position: 43761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43761:1:source
so part of: sequence
organism: Sphingobium indicum B90A
mol type: genomic DNA
strain: B90A
isolation source: sugarcane rhizosphere soil
culture collection: MTCC:6364
type material: type strain of Sphingobium indicum
plasmid: pSRL3
country: India: Cuttack

861109
type: Taxonomy
SIO_000068: taxonomy

SIDU_RS18780
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18780
old locus tag: SIDU_18440
so part of: sequence
location: 1..1113
location: region:1-1113:1
so has part: feature:1-1113:1:exon
subclass of: SO_0000010

position:1113:1
position: 1113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1113:1:exon

SIDU_RS18780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18780
old locus tag: SIDU_18440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008832586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTIDPSPSLFDAPIAAPVSAVDGDDRTPLLPVRHPNQDLFICDVLDAIPKDDMASMEHPVFSLSTKPDNRTRRYEHNGNVIEIIPSGKGLATIHDKDILIYCISQLVAKMNQGEQPSRTVRLQAYDMLVATNRQTSGEGYRLMADALTRLRGTTVRTNIQTGGVEETRIFGLIEEAKITRKTFDGRMLDLEITLSDWVYRSVISKNVLTLHRDYFRLRKPFERRMYELARKHCGVKDEWKIGLELLQKKCGSNSPLRVFRALVKKVCEHDADHGHFPDYAVTMDDDVILFRNRSGLKSKPDPVASAGDDAPYIDPETMHDAKTAAPGYDVYALYDEWVSWWHDMGKPELKSPAGAFLGFCKKRHERKPLR
SIO_010081: SIDU_RS18780
subclass of: SO_0000673
so part of: SIDU_RS18780
location: 1..1113
location: region:1-1113:1
so has part: feature:1-1113:1:exon

WP_007686147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1113:1:exon

SIDU_RS18785
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18785
old locus tag: SIDU_18445
so part of: sequence
location: complement(1177..1491)
location: region:1177-1491:-1
so has part: feature:1177-1491:-1:exon
subclass of: SO_0000010

position:1177:-1
position: 1177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491:-1
position: 1491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177-1491:-1:exon

SIDU_RS18785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18785
old locus tag: SIDU_18445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013041578.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRKGSLLALRDRDAAPAPAMVEPEGRAAAPIARGTGAGSGSGSSSNPVAPSRQGKKAMTGYFSPEMSFAMHMTARKHGMSLQDAMAEAFNDWLRKMGESPVGK
SIO_010081: SIDU_RS18785
subclass of: SO_0000673
so part of: SIDU_RS18785
location: complement(1177..1491)
location: region:1177-1491:-1
so has part: feature:1177-1491:-1:exon

WP_007686146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1177-1491:-1:exon

SIDU_RS18790
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18790
old locus tag: SIDU_18450
so part of: sequence
location: complement(1488..2141)
location: region:1488-2141:-1
so has part: feature:1488-2141:-1:exon
subclass of: SO_0000010

position:1488:-1
position: 1488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141:-1
position: 2141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1488-2141:-1:exon

SIDU_RS18790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18790
old locus tag: SIDU_18450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012554518.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MPTIAIISQKGGAGKTTLALHLAAAAEDSGHTALVIDVDPQATASQWAAWRQDAPPVVIDSAPPRLAAKIEQATGQGAAFIVIDTPPHADSAASAAVEAADLVLIPCRPSAFDLAAIKTTASLVKMRGKPAFVIFTAGSPTAPRMYDEAAQLVQDYGLDACPHHIADRAAFRHAAAEGKTAMEIEPSGKAADEVRQLYKWTCEHVNMQASRKRRANA
SIO_010081: SIDU_RS18790
subclass of: SO_0000673
so part of: SIDU_RS18790
location: complement(1488..2141)
location: region:1488-2141:-1
so has part: feature:1488-2141:-1:exon

WP_007686145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1488-2141:-1:exon

SIDU_RS19560
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS19560
pseudo: true
so part of: sequence
location: complement(2268..>2399)
location: region:2268-2399:-1
so has part: feature:2268-2399:-1:exon
subclass of: SO_0000010

position:2268:-1
position: 2268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399:-1
position: 2399
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2268-2399:-1:exon

SIDU_RS19560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS19560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008831324.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcription elongation protein SprT
SIO_010081: SIDU_RS19560
subclass of: SO_0000673
so part of: SIDU_RS19560
location: complement(2268..>2399)
location: region:2268-2399:-1
so has part: feature:2268-2399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2268-2399:-1:exon

SIDU_RS18795
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18795
old locus tag: SIDU_18455
so part of: sequence
location: complement(2429..5377)
location: region:2429-5377:-1
so has part: feature:2429-5377:-1:exon
subclass of: SO_0000010

position:2429:-1
position: 2429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5377:-1
position: 5377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2429-5377:-1:exon

SIDU_RS18795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18795
old locus tag: SIDU_18455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011950672.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPGRIPMTTRQRAALLMLPDDEAAIVKHYSLSGEDMTAIDTARTPATRLGYALQLCCLRYPGRHLRHGELLPAVMLDHIAEQVGVDAKVIADFARRTPTRYDQLAAIKTRFGFSDLSRPHRVELRTWLTNEAASIIDGRALLGRLLDEMRARRIVIPGVSVVERMAAEAIHQAETDLVAAIDGGLGHEMRQQLDALIDDKVHDRQSRLSWLREPEPRVASASLLEIVEKITLIRGTGISAFSPDVRHEPRLGQFAREGVRYTAQAFQQMRPARRRVVLLATLRELEATLTDAAIDMFIALVGRAHLRARKRLEQRVAVSGREGRERMLRIARVLEAISQAARAGGDVAAAVDAVASLDIIDADAAIIRRTASPHRNEVLDEIAAEYRAFKRMGPSFVRAFDFQGRAGMQPLRDAMAILADLDGDWRRALPDDVPLGHVEHRWRRHVMTAGGIDRTHWEMATYSALSNALASGGIWVPTARVHRALSVLLAPPASPVPKPAFSLGDPHAWLDERAARLDSALREVARDLDKRDPPLFAGERLRFPKDPKEDPGQDEGRQLALTCYGMVPATRITDVLSQVQRWTGFIQHFGHVSTGLPPADERAFLATLIAEATNLGLSRMAEVCGVASRRALLRMQTWHMREETFRAALASLTDAIHAEPLAAWFGSGHRASADGQAYYLGGAGEAGGTVNAHYGRDPVVKIYTTITDRYAPLHQTVIAGTAGEAIHALDGILGHESSADITALHTDGGGVSDIVFAVMHLLGLDFEPRIPRLSDRQLYGFEPARRYGRLAPLFGRRLGRDLIVSHWAEIAEVIAAMRDRTVTPSLILKKLSAYRQQNSLAAALREVGRIERTLFTLRWFDDTDLRRTVTAELNKGEARNSLARAVAFHRLGRFRDRGLENQQTRAAALNLVTAAIILFNCRYLGRAVDELRHRGTPVDPAMLSRLSPLGWDRINLTGDYIWSESLDLDADGLMPLLIKPLP
SIO_010081: SIDU_RS18795
subclass of: SO_0000673
so part of: SIDU_RS18795
location: complement(2429..5377)
location: region:2429-5377:-1
so has part: feature:2429-5377:-1:exon

WP_233431824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2429-5377:-1:exon

SIDU_RS18800
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18800
old locus tag: SIDU_18460
so part of: sequence
location: 5506..6099
location: region:5506-6099:1
so has part: feature:5506-6099:1:exon
subclass of: SO_0000010

position:5506:1
position: 5506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6099:1
position: 6099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506-6099:1:exon

SIDU_RS18800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18800
old locus tag: SIDU_18460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007683474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTRAPYLIGYARVSKGDEQSNAAQRRALDAAGCRRVFEEIASGGRWDRPKLLEMIGQLRDSDVVVVWKLDRLSRSLKDLLHIMERIEAAGAGFRSLTEAIDTTTAAGRMMMQMVGSFAEFERAMIRERTSAGLAQARAEGRIGGRRRKLGEKQRREIAESVISGRKSGAEMARLYHVSEPTVSRIVAAHRQTMELPA
SIO_010081: SIDU_RS18800
subclass of: SO_0000673
so part of: SIDU_RS18800
location: 5506..6099
location: region:5506-6099:1
so has part: feature:5506-6099:1:exon

WP_007683474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5506-6099:1:exon

SIDU_RS18805
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18805
old locus tag: SIDU_18465
so part of: sequence
location: 6096..7457
location: region:6096-7457:1
so has part: feature:6096-7457:1:exon
subclass of: SO_0000010

position:6096:1
position: 6096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7457:1
position: 7457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6096-7457:1:exon

SIDU_RS18805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18805
old locus tag: SIDU_18465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007683476.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRGHDLTGLMKFATRPEWADDLHDALDDHLGPVLTQFDIDSDELPGIIGDHWAMTLWGCAFEDLVTRVFEPDGRNIVDEYLKRRGWNEAGPNKLYMRALKTSVMSVYEVSAIEPGVGFLARDLIRGGDPVQVRERTASRTLGPWDRIGVRIIPVSGHRILAGGLLSFTAEATSALLEALRLGQGKRGPRAKLVIDDDQLRDLAPLISMVWLFDILPRMLEPVAIPTLHNADGEEVVFHRVRFPFTRGTTQALIGDRLDTVPALQRETSHFWNWLGTRTKQGKKGTGQMAWGVSMEDGTPVLGNLELKGRALILSVTSAERAERGVALVTQALGALVGTPLTEIETIEQAMAARQEGRTVSEPAPDIPVEVATPLVHGMLDRQYRTLLDEPVPMLGDKTPRQCAGSKAGRDQLATWLKHLENLSGRHADIDDPMATYDFGWIWQELGIEELRR
SIO_010081: SIDU_RS18805
subclass of: SO_0000673
so part of: SIDU_RS18805
location: 6096..7457
location: region:6096-7457:1
so has part: feature:6096-7457:1:exon

WP_007683476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6096-7457:1:exon

SIDU_RS18810
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18810
old locus tag: SIDU_18470
so part of: sequence
location: complement(7584..8255)
location: region:7584-8255:-1
so has part: feature:7584-8255:-1:exon
subclass of: SO_0000010

position:7584:-1
position: 7584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8255:-1
position: 8255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7584-8255:-1:exon

SIDU_RS18810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18810
old locus tag: SIDU_18470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008831324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT-like domain-containing protein
translation: MEQDNRESWLNRVAAGMAPLFAALDAPLPARIRVAIGFTSSGRKGKAIGECWDNRLSADGHFEIFIRPDLAHAPDAMPAQIAAILAHELVHAAVGIPAGHGKAFKRIALGLGLVGPMRATTPGEAFLAAVAPILDAVGPLPHARLDTDGESTAPKKQKTRMLKCECATCGYTGPCALFGHRFTVGELEGRRRQLLCQGLRYVSRRGHTKRPAQRPAIVLGEDA
SIO_010081: SIDU_RS18810
subclass of: SO_0000673
so part of: SIDU_RS18810
location: complement(7584..8255)
location: region:7584-8255:-1
so has part: feature:7584-8255:-1:exon

WP_233431923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7584-8255:-1:exon

SIDU_RS18815
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18815
old locus tag: SIDU_18475
so part of: sequence
location: 8670..8951
location: region:8670-8951:1
so has part: feature:8670-8951:1:exon
subclass of: SO_0000010

position:8670:1
position: 8670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8951:1
position: 8951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8670-8951:1:exon

SIDU_RS18815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18815
old locus tag: SIDU_18475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017503755.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAATAFVRARIDETLKDEAAAVLAELGLTVSDVVRMTLTRVAKDHALPFELKVPNAETRAAIESSRATMKARRARFTDPKELFDALDQEARQQ
SIO_010081: SIDU_RS18815
subclass of: SO_0000673
so part of: SIDU_RS18815
location: 8670..8951
location: region:8670-8951:1
so has part: feature:8670-8951:1:exon

WP_007685985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8670-8951:1:exon

SIDU_RS18820
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18820
old locus tag: SIDU_18480
so part of: sequence
location: 8920..9240
location: region:8920-9240:1
so has part: feature:8920-9240:1:exon
subclass of: SO_0000010

position:8920:1
position: 8920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9240:1
position: 9240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8920-9240:1:exon

SIDU_RS18820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18820
old locus tag: SIDU_18480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MPSTKKPASSKRASFPREASYEKRFVKDWERLSRSGRYNMNQLKEAMMLLIANDAPLGPEWLDHALKGDWSDHRECHIGGDFLLIYTIEGNLVNFVRAGTHSELFE
SIO_010081: SIDU_RS18820
subclass of: SO_0000673
so part of: SIDU_RS18820
location: 8920..9240
location: region:8920-9240:1
so has part: feature:8920-9240:1:exon

WP_007685988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8920-9240:1:exon

SIDU_RS18825
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18825
old locus tag: SIDU_18485
so part of: sequence
location: 9276..9695
location: region:9276-9695:1
so has part: feature:9276-9695:1:exon
subclass of: SO_0000010

position:9276:1
position: 9276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9695:1
position: 9695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9276-9695:1:exon

SIDU_RS18825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18825
old locus tag: SIDU_18485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MNADDMKVETFACVFDAIADTPEEATELRTRADLMRGITARVKSWDVPLGEAAKRLGLTPPRLNDLLRGKFNRFSLDDLMTAATAAGIAPPAPRKSSWDDLRGIVKGNGARFTIEEINDAIAEAGAAAGMAGMNDHDGD
SIO_010081: SIDU_RS18825
subclass of: SO_0000673
so part of: SIDU_RS18825
location: 9276..9695
location: region:9276-9695:1
so has part: feature:9276-9695:1:exon

WP_007685989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9276-9695:1:exon

SIDU_RS18830
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18830
old locus tag: SIDU_18490
so part of: sequence
location: 9747..9908
location: region:9747-9908:1
so has part: feature:9747-9908:1:exon
subclass of: SO_0000010

position:9747:1
position: 9747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9908:1
position: 9908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9747-9908:1:exon

SIDU_RS18830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18830
old locus tag: SIDU_18490
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRQESGLSQAGFARLLWAHKRTVQRWEAGTMRPTGAALALLTLVKRRGIQILT
SIO_010081: SIDU_RS18830
subclass of: SO_0000673
so part of: SIDU_RS18830
location: 9747..9908
location: region:9747-9908:1
so has part: feature:9747-9908:1:exon

WP_015449421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9747-9908:1:exon

SIDU_RS19565
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS19565
so part of: sequence
location: complement(10148..10717)
location: region:10148-10717:-1
so has part: feature:10148-10717:-1:exon
subclass of: SO_0000010

position:10148:-1
position: 10148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10717:-1
position: 10717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10148-10717:-1:exon

SIDU_RS19565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS19565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRHLTAASLSIVSLLSACSASAERRLEGRVFDIPRANDISDNDKPFFLPALDPSDGFSFYLNPSASLPERNLVGVASKKRMCARAAGTEALVNSTVCASRPLSWRGRTLRKVSDGVFWTYQLPAEAGQKRPPSLASCSAMGGGSRPGLCTANLPYDNLVLTIHFRDNQVGSLQALYDQSVASLRKWER
SIO_010081: SIDU_RS19565
subclass of: SO_0000673
so part of: SIDU_RS19565
location: complement(10148..10717)
location: region:10148-10717:-1
so has part: feature:10148-10717:-1:exon

WP_062121710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10148-10717:-1:exon

SIDU_RS18835
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18835
old locus tag: SIDU_18495
so part of: sequence
location: complement(10818..11795)
location: region:10818-11795:-1
so has part: feature:10818-11795:-1:exon
subclass of: SO_0000010

position:10818:-1
position: 10818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11795:-1
position: 11795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10818-11795:-1:exon

SIDU_RS18835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18835
old locus tag: SIDU_18495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MLADVQSSYGLARPFQGVGNFETEHQRNLVREVCAAVQTGRLIVVSGLVGSGKTHLLRRIEDELARAGKVAVAKSLAVDKRRTSLPSLIEALFYDLSPGDRAQVKIPKQAERRERDLRDIMRKGKRPVVLVVDEAHDLHHKTLTGLKRLMEVVADAGVLLSVLLVGHPRLRNDLRRPQMEEIGYRTTTFDYEGIGAERRDYVAWLLGACAAEGVKVADLMNEDAIDLIAERLRTPLQIEMHLTLAFEQGFRFAAKPVTAEIVEQVLSRAIDDLEPTLTRNGYDAGALASQLNTRPSDIRAFLAGTLDAEHTRDLTERLREAGVPI
SIO_010081: SIDU_RS18835
subclass of: SO_0000673
so part of: SIDU_RS18835
location: complement(10818..11795)
location: region:10818-11795:-1
so has part: feature:10818-11795:-1:exon

WP_007685991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10818-11795:-1:exon

SIDU_RS18840
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18840
old locus tag: SIDU_18500
so part of: sequence
location: complement(11795..13447)
location: region:11795-13447:-1
so has part: feature:11795-13447:-1:exon
subclass of: SO_0000010

position:13447:-1
position: 13447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11795-13447:-1:exon

SIDU_RS18840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18840
old locus tag: SIDU_18500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS481 family transposase
translation: MADRAKRPPGEALIDLRRRLSLLPPRDPGRTEIIARAAEAYGISIWTLYRALRELNRPKSVRRSDHGATRVAPQAEMERYAEIVAALKIRTTNKKGRHVSTARAIEFLETDGVETPEGLVKVAPGLLKRATIDRLLRSSGLDYARVTRPHAAVRFQARRSNELWHFDMSPSDLKQVEAPLWIEQGRGKPTLMLFSAVDDCSGVVYQEYRSVYGEDAESALRFLFNAFAAKPEPELPFQGLPVTIYMDNGPVSRSRVFQSVMGSLGVRVLTHLPPKADDRHTAARAKGKVERPFRTVKEVHETLYHFHKPKDEAEANLWMRRALVTYNNGDHRSEPHARIEHWLRHLPGDGVRAMCSWERFCAFAREPERRTVAGDATVSVEGASYEVEPELAGETVTLLWGLFDQQLFVEHDGKRHGPYEPSRGAVPLYRYRKYQKSRAEERLDKVVRLADQLGLPRATVTGGDRPLPSLPPSTAGLAVRQTPFPEPAVETAYPTGLAARHAIVDQLRRPLGSLPEADRAFIDALLGETLDKTIIADRIRERFQSRRGTS
SIO_010081: SIDU_RS18840
subclass of: SO_0000673
so part of: SIDU_RS18840
location: complement(11795..13447)
location: region:11795-13447:-1
so has part: feature:11795-13447:-1:exon

WP_007685992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11795-13447:-1:exon

SIDU_RS18845
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18845
old locus tag: SIDU_18505
so part of: sequence
location: complement(13440..14036)
location: region:13440-14036:-1
so has part: feature:13440-14036:-1:exon
subclass of: SO_0000010

position:13440:-1
position: 13440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14036:-1
position: 14036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13440-14036:-1:exon

SIDU_RS18845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18845
old locus tag: SIDU_18505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRVGYARVSTSDQNPELQLDALRRAGCERVFTEKASGARDDRPELARILEDVLRAGDTLVVWKLDRLARSLKKLIATAEDLEREKIGLVSLTESIDTTTPGGMLTFHVFGAIAQFERALIRERTTAGLVEARRQGRKGGRPSAMRPSDVAAARAMMKEGTLPVRDIAKRMGVSVATLYRYAGKRGSGASIKEAATAHG
SIO_010081: SIDU_RS18845
subclass of: SO_0000673
so part of: SIDU_RS18845
location: complement(13440..14036)
location: region:13440-14036:-1
so has part: feature:13440-14036:-1:exon

WP_007685993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13440-14036:-1:exon

SIDU_RS18850
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18850
old locus tag: SIDU_18510
so part of: sequence
location: 14202..14894
location: region:14202-14894:1
so has part: feature:14202-14894:1:exon
subclass of: SO_0000010

position:14202:1
position: 14202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14894:1
position: 14894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14202-14894:1:exon

SIDU_RS18850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18850
old locus tag: SIDU_18510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQVLDTVGWVGDGDDTDFFLAIERTFDLRLRSNLPWTTFGEVRDHVVAHVAAYSGGGTTCATQMTFYRLRRALGLGRHVGPDAPLAPLIGGKLRQAFSDLEADTDLKMPATRAGWLGIVSGLCFAVAVAILAFTTLAPPLRIFAAGASAYAGLWLRHLDRRRLPRRCDTIGDLARLVTEQNRGRLARDGARLTAPEIWRIIQQLAAEESGIDPDLIGSETTFFRAKVRAA
SIO_010081: SIDU_RS18850
subclass of: SO_0000673
so part of: SIDU_RS18850
location: 14202..14894
location: region:14202-14894:1
so has part: feature:14202-14894:1:exon

WP_007685994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14202-14894:1:exon

SIDU_RS18860
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18860
old locus tag: SIDU_18520
so part of: sequence
location: 15577..16116
location: region:15577-16116:1
so has part: feature:15577-16116:1:exon
subclass of: SO_0000010

position:15577:1
position: 15577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16116:1
position: 16116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15577-16116:1:exon

SIDU_RS18860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18860
old locus tag: SIDU_18520
inference: COORDINATES: protein motif:HMM:NF039236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: vanillate O-demethylase oxygenase
translation: MGKRHVFQDGDTVWSNVSHPNDFISDIMNNMFNSHGKRFDAWTDVQWTAPGSMSLLSYYAEPGTPKEDGHMHTSIHVMTPESPDTTHYFWAFGRDIHPDNEEFSAKLRAGIEYAFEEEDKPMIALQQAQVGDRDIMSMRPVLLAGDAGAVRARRMLRKLIAQEQSNGEEASDQKQSVDA
SIO_010081: SIDU_RS18860
subclass of: SO_0000673
so part of: SIDU_RS18860
location: 15577..16116
location: region:15577-16116:1
so has part: feature:15577-16116:1:exon

WP_257721833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15577-16116:1:exon

SIDU_RS18865
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18865
old locus tag: SIDU_18525
so part of: sequence
location: 16308..18863
location: region:16308-18863:1
so has part: feature:16308-18863:1:exon
subclass of: SO_0000010

position:16308:1
position: 16308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18863:1
position: 18863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16308-18863:1:exon

SIDU_RS18865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18865
old locus tag: SIDU_18525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685998.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MKNRIKIGLMLGTAGALGWTPAYAQAPAEAQIAPALPQAVAPAQAESTDPASNVGIGDIVVTAQRRAENVQQVPIAVAAFSGAALQEKGVDNVSQLANLTPGVQLSSTSQIFSSPSMLSGFIRGIGQDDFALNFDPGVGTYVDGVYLARTAGSNVDLLDVERIEILKGPQGTLFGRNTIGGAISVVTRKPTDDFSVMGQVSGGRFNRIDVGGVINIPIVEGKLKSSIAFSSKNRNAWQKRIPFPGAAGFASDPSEAFQQIDYTSRTAAGGISEQGVRGKLLWNATNAIDVTLEGDYLNSETSASPSTLLGTRSTVLSPAGTPVDADGNGVPDSTLAGLYNTCISLPESVLGAIGLGGACGPRAGGLPAIAGANADADPTNSRLPIDNRFVTGSLNRGYGTGINFTNTRNFGFTGTVDIDLGGPALKSITAYRNLDTRFGQDLDNSPVVGFEGSFRVKQHQFSEELQLSGKAFNDKLDYLVGAYYFSEGGRESEDVAFPGGLLQIVGNYRFNTKSYALFTHLNYRVNDLIGITLGGRYTKEDKTLVGSQRDLNMLLTKLGTPAFLFPDPTDLSQFYPTGEQKLSFSNVSPRVGIELHPTERIMLYGSFSKGFKSGGWTTRVAAPVPPDPTKPADKQAPSFNPEKADTFEIGFKSQLFDRMLQVNAAAFYTDYKGIQIQIQRGIGASFENAGNARIKGFEVETIFAPSRVFRVSASAGYIDAYYRRINDPSGTITLASRLPRVPKWTATLSPEFNVFLANEGRVTLRADYSYKSTMAADAENTPELFSGNVSLVNASLTYSAPGDDWSLAIGGNNVFNKRYIANGVNQLNGAGLLSAVPNRPSEYYATLRFKF
SIO_010081: SIDU_RS18865
subclass of: SO_0000673
so part of: SIDU_RS18865
location: 16308..18863
location: region:16308-18863:1
so has part: feature:16308-18863:1:exon

WP_007685998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16308-18863:1:exon

SIDU_RS18870
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18870
old locus tag: SIDU_18530
so part of: sequence
location: complement(18958..19836)
location: region:18958-19836:-1
so has part: feature:18958-19836:-1:exon
subclass of: SO_0000010

position:18958:-1
position: 18958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19836:-1
position: 19836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18958-19836:-1:exon

SIDU_RS18870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18870
old locus tag: SIDU_18530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013041683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MLLDALLKRHSVSAAARELDLPQPTASHGLARLRKALGDPLLVRARDGMEPTPRAEAIAGVVQQLLELRRDLAEGGQTFSPDRLKREFIIAGSDIAHLVVLTALHSAARFEAPHTSYRALTLSGDEMVSALETGHVDIAVGAYPSLVAGIKTQRLYQEEYLCFGKEGHPFIKSGETDDFMAADHIVVSTKGMAHAHRAVERALLDKIHPDRIRIVASSFLVALAACFESDLILTAPARVIGRLAEVYGLRAVRPPILMEAFEVRQYWHARNQDDPPHRWLRQLLHKVLSARM
SIO_010081: SIDU_RS18870
subclass of: SO_0000673
so part of: SIDU_RS18870
location: complement(18958..19836)
location: region:18958-19836:-1
so has part: feature:18958-19836:-1:exon

WP_233431924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18958-19836:-1:exon

SIDU_RS18875
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
gene: linE
locus tag: SIDU_RS18875
old locus tag: SIDU_18535
so part of: sequence
location: 20001..20966
location: region:20001-20966:1
so has part: feature:20001-20966:1:exon
subclass of: SO_0000010

position:20001:1
position: 20001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20966:1
position: 20966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20001-20966:1:exon

SIDU_RS18875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
gene: linE
locus tag: SIDU_RS18875
old locus tag: SIDU_18535
EC number: 1.13.11.66
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686007.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chlorohydroquinone/hydroquinone 1,2-dioxygenase
translation: MMQLPERVEGLHHITVATGSAQGDVDLLVKTLGQRLVKKTMFYDGARPVYHLYFGNELGEPGTLYTTFPVRQAGYTGKRGAGQISAVSYNAPVGTLSWWQEHLIKRAVTVSEVRERFGQKYLSFEHPDCGVGFEIIEQDTDGQFEPWDSPYVPKEVALRGFHSWTATLNRNEEMDSFMRNAWNLKPQGRDGNYQRYAFGNGGAAKVLDVYIDEDERPGTWALGEGQVHHAAFEVADLDVQAALKFDVEGLGYTDFSDRKHRGYFESIYVRTPGGVLFEASVTLGFTHDESPEKLGSEVKVAPQLEGVKDELLRTMNDPIVI
SIO_010081: SIDU_RS18875
subclass of: SO_0000673
so part of: SIDU_RS18875
location: 20001..20966
location: region:20001-20966:1
so has part: feature:20001-20966:1:exon

WP_007686007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20001-20966:1:exon

SIDU_RS18880
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18880
old locus tag: SIDU_18540
so part of: sequence
location: 21001..21801
location: region:21001-21801:1
so has part: feature:21001-21801:1:exon
subclass of: SO_0000010

position:21001:1
position: 21001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21801:1
position: 21801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21001-21801:1:exon

SIDU_RS18880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18880
old locus tag: SIDU_18540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013041682.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MWRHRAVNSRNGARIGVHTTGLPSGEPILLLSSLLADWRSWNDVAGRLPSGVYAITMDLRGHGTSSPSAGDYSLAELAADVLNVMDNLAFARVHLVGTSVGSMVAQYLGATAGHRLISLTLVAAGSLVPEPAWPIWDKRVAAVRSGGLITQVPIVYPAWFSGAVDQGLLDLAESMILATTVAGFTGAVAAIKGHDARSLLPQVETPTLVIAGANDAAVPPEAVRATAALIPGAAFEVVTGAAHQVAMQHPVAFADRLCRHIAGAPR
SIO_010081: SIDU_RS18880
subclass of: SO_0000673
so part of: SIDU_RS18880
location: 21001..21801
location: region:21001-21801:1
so has part: feature:21001-21801:1:exon

WP_218847786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21001-21801:1:exon

SIDU_RS18885
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18885
old locus tag: SIDU_18545
so part of: sequence
location: 21798..22514
location: region:21798-22514:1
so has part: feature:21798-22514:1:exon
subclass of: SO_0000010

position:21798:1
position: 21798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22514:1
position: 22514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21798-22514:1:exon

SIDU_RS18885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18885
old locus tag: SIDU_18545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686010.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: esterase
translation: MTFSPEGPYGTIVTGPPVEQANAAIILLHGRGQRAQAMLELARQLDLPSVAWLALQAPAGAWYSPKYDGFDPDGDRSVADACTALAEISSRLEAAWVALDRQGIVGFSQGACLASHFMWCGAAKMGFLGSLTGSLPGFELPTAPVEPRFTGLKAIFTGGLNDDWVKAEHVRETAERFRLSGADVGEYIQPIKDHGIGADEIALLRDTLIARFELNPPVPTRGPRHQPLVPQSTPSLTD
SIO_010081: SIDU_RS18885
subclass of: SO_0000673
so part of: SIDU_RS18885
location: 21798..22514
location: region:21798-22514:1
so has part: feature:21798-22514:1:exon

WP_007686010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21798-22514:1:exon

SIDU_RS18890
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18890
old locus tag: SIDU_18550
so part of: sequence
location: 22522..23154
location: region:22522-23154:1
so has part: feature:22522-23154:1:exon
subclass of: SO_0000010

position:22522:1
position: 22522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23154:1
position: 23154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22522-23154:1:exon

SIDU_RS18890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18890
old locus tag: SIDU_18550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686013.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YciI family protein
translation: MLFSVITTISPEKLAERTAAIPAHRAYLASHTASILAVGTTFAEGGDLVGSTYLVDVDDWNAARAFIAEDPMTVSGARQSIDILEWRMGGFDRRYPWQGANVERQDAAHQSLNKEGVSAAPQPSLRTRHLRVLLLITTLAPLVALVNILLGDTIAHLPVLLRSFLVVGLVVPAATYVALPLLTGLARCVGQERRESSPAIRPPAEHTHST
SIO_010081: SIDU_RS18890
subclass of: SO_0000673
so part of: SIDU_RS18890
location: 22522..23154
location: region:22522-23154:1
so has part: feature:22522-23154:1:exon

WP_007686013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22522-23154:1:exon

SIDU_RS18895
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
gene: linD
locus tag: SIDU_RS18895
old locus tag: SIDU_18555
so part of: sequence
location: 23214..24254
location: region:23214-24254:1
so has part: feature:23214-24254:1:exon
subclass of: SO_0000010

position:23214:1
position: 23214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24254:1
position: 24254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23214-24254:1:exon

SIDU_RS18895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
gene: linD
locus tag: SIDU_RS18895
old locus tag: SIDU_18555
EC number: 2.5.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013035740.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,5-dichlorohydroquinone reductive dechlorinase
translation: MSADTETLARKVREEVIKPEQSTLISPDRQSPSLLRREATVEPRFELFHFVFSVCSQKVRGTLMEKGVTFGSNELTILPPQSENYCPQYVRLRLRSEAAAKHRPVSSFTGQSSVDSEGFDPLVVPTLVDHETGRILADSKAICLYLCDALSGGTDLLPADIREAVLKQVQLADTTPHVALLYGADPDGDRRPESMQAVMPGIHAHKIDAVRRNIPLADGDPLLLEAYQHKIVKEEAAASFVINEPQMRTAISKAEQLVTDLDRDLGASTGPWLFGDRFTLADLFWAVSLYRFLWLGYSGFWKDGAGKPRVEAYANRLFARPSVKDAIIQWPGHPPSENVIHLLSNA
SIO_010081: SIDU_RS18895
subclass of: SO_0000673
so part of: SIDU_RS18895
location: 23214..24254
location: region:23214-24254:1
so has part: feature:23214-24254:1:exon

WP_031293069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23214-24254:1:exon

SIDU_RS19570
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS19570
pseudo: true
so part of: sequence
location: complement(24460..>24564)
location: region:24460-24564:-1
so has part: feature:24460-24564:-1:exon
subclass of: SO_0000010

position:24460:-1
position: 24460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24564:-1
position: 24564
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24460-24564:-1:exon

SIDU_RS19570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS19570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: SIDU_RS19570
subclass of: SO_0000673
so part of: SIDU_RS19570
location: complement(24460..>24564)
location: region:24460-24564:-1
so has part: feature:24460-24564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24460-24564:-1:exon

SIDU_RS18910
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18910
so part of: sequence
location: 24658..25422
location: region:24658-25422:1
so has part: feature:24658-25422:1:exon
subclass of: SO_0000010

position:24658:1
position: 24658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25422:1
position: 25422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24658-25422:1:exon

SIDU_RS18910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS6100 family transposase
translation: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLDKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
SIO_010081: SIDU_RS18910
subclass of: SO_0000673
so part of: SIDU_RS18910
location: 24658..25422
location: region:24658-25422:1
so has part: feature:24658-25422:1:exon

WP_015449415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24658-25422:1:exon

SIDU_RS19715
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS19715
old locus tag: SIDU_18565
so part of: sequence
location: 25538..25687
location: region:25538-25687:1
so has part: feature:25538-25687:1:exon
subclass of: SO_0000010

position:25538:1
position: 25538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25687:1
position: 25687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25538-25687:1:exon

SIDU_RS19715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS19715
old locus tag: SIDU_18565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTNIVEGQSVMLATLNTFAAIVMCFAVAAALIWLAPKPKGPIDTNAGH
SIO_010081: SIDU_RS19715
subclass of: SO_0000673
so part of: SIDU_RS19715
location: 25538..25687
location: region:25538-25687:1
so has part: feature:25538-25687:1:exon

WP_158514642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25538-25687:1:exon

SIDU_RS18920
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18920
old locus tag: SIDU_18570
so part of: sequence
location: 25730..26440
location: region:25730-26440:1
so has part: feature:25730-26440:1:exon
subclass of: SO_0000010

position:25730:1
position: 25730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26440:1
position: 26440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25730-26440:1:exon

SIDU_RS18920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18920
old locus tag: SIDU_18570
inference: COORDINATES: protein motif:HMM:NF025605.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MSNKEGAAIRPVAQSSRRAERKEERRRLLIAAARSVFHEKGFAAATIDDIMARTGGSRGTLYGHFDGKLALFEAIVEEEAERFAQAVTETIAPAASGDLDAMAERLIAVATSEETIDLLRMVIAERQHYPGIGEIYRQIVPRIQAWMRRMFREQTGASFCRDEAASDFLADMFLAIVLADTQMGILTGITGDRLDKTHLIRTRQRLKALLALRDHLGADRLSELAALAQQDIEDGR
SIO_010081: SIDU_RS18920
subclass of: SO_0000673
so part of: SIDU_RS18920
location: 25730..26440
location: region:25730-26440:1
so has part: feature:25730-26440:1:exon

WP_007686175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25730-26440:1:exon

SIDU_RS18925
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18925
old locus tag: SIDU_18575
so part of: sequence
location: 26430..26912
location: region:26430-26912:1
so has part: feature:26430-26912:1:exon
subclass of: SO_0000010

position:26430:1
position: 26430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26912:1
position: 26912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26430-26912:1:exon

SIDU_RS18925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18925
old locus tag: SIDU_18575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADECIADWEVISARIHDLWVDRLDNYDRAMRGDLHDIGILVRDEFALGDRKAEQAITRWTAENRPRSLLNAQWQRFRTAMQDRWEPQTPFDPDNRDDLNAARNLVIHDIDELLNRMIEHYRLTETTAAVQVNDWLNLVRVLTENQPRKRLSPRWTRSPQ
SIO_010081: SIDU_RS18925
subclass of: SO_0000673
so part of: SIDU_RS18925
location: 26430..26912
location: region:26430-26912:1
so has part: feature:26430-26912:1:exon

WP_007686174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26430-26912:1:exon

SIDU_RS18930
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18930
old locus tag: SIDU_18580
so part of: sequence
location: 26909..27715
location: region:26909-27715:1
so has part: feature:26909-27715:1:exon
subclass of: SO_0000010

position:26909:1
position: 26909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27715:1
position: 27715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26909-27715:1:exon

SIDU_RS18930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18930
old locus tag: SIDU_18580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MNEIKEPVMNISETVPMERRRAIVVGAAGGIGSDICRRMALEGYRVVVADYNEDRAREVLRTLAGEGHDVSVFDVTKDRAVDAAFDSIEADGPASVLVVASGGAPVNPDNPHPNIATTATEDWNRGIALNLSGVFFCIRKFAQLRLARPLEHSRIITMTSGTGQLAVSPANPAYVASKAALIGLTRQVAYDLAHANITVNTIAPGVVGTPEFYRNTSEEFRAQTARSALLNRLGTPEEVGFGVVFLASPQASYITGTTLDINGGAHMH
SIO_010081: SIDU_RS18930
subclass of: SO_0000673
so part of: SIDU_RS18930
location: 26909..27715
location: region:26909-27715:1
so has part: feature:26909-27715:1:exon

WP_007686172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26909-27715:1:exon

SIDU_RS18935
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18935
old locus tag: SIDU_18585
so part of: sequence
location: 27766..29055
location: region:27766-29055:1
so has part: feature:27766-29055:1:exon
subclass of: SO_0000010

position:27766:1
position: 27766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29055:1
position: 29055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27766-29055:1:exon

SIDU_RS18935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18935
old locus tag: SIDU_18585
EC number: 1.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686170.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MSPRKNILIVGGGVAGLDLAGQLAGAPAKRLGLDIRLIDREPAHVWKPMLHTIAAGTADTGANQTAYLVQAQQRGFRFEMGEVMAVDRAAKQVLLAPLVVDGAEILPARSLPYDKLVLAAGSRANDFGTPGVVEHCMTIDCRREAIAFSERLRVAMLQAIASNDHLSIAIVGAGATGVELASELVRLADVLEQHGASGARSGLKIYLIESQPRILGPFPERVAHAAHTVLESLGIEVLTQARVLAGDADGFQLADGRRIEASIKLWAAGVRAPEFVAAIDGLDHSRLGQVIVNPNLATPNDPDIFALGDCASVMLPDRESPLPTTAQAAYQQSVYLGRTLPTILEGKPVPPFRYHDFGSLVSLGGYDAYGTLGRFGLFRGGFLHGRMAQLGHALLYRRHQARIYGPVRGSLLWLADTLDTSVRRRERLA
SIO_010081: SIDU_RS18935
subclass of: SO_0000673
so part of: SIDU_RS18935
location: 27766..29055
location: region:27766-29055:1
so has part: feature:27766-29055:1:exon

WP_007686170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27766-29055:1:exon

SIDU_RS20160
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS20160
so part of: sequence
location: 29057..30265
location: region:29057-30265:1
so has part: feature:29057-30265:1:exon
subclass of: SO_0000010

position:29057:1
position: 29057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30265:1
position: 30265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29057-30265:1:exon

SIDU_RS20160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS20160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018075411.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004620 - phospholipase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase A
translation: MGRLHQRSCLILGAFWLVLPGTVWASPPDMEVLLTGQVETDASGEQVVALRFLNRTDRQEILALPDRIEAKVRQENRERTLLLARANDTEPHLAIDAHGFGQAHYRLPANEPLVRAMVSIPAWSTQEVVLAPIVKTATHEAENRSNPNAPILPPPPTDRKAGNAFVDNLDLYEPIYAVYGPGTDSEARIQLSFKYRLFGASANSQTSSNWRDGLYLAYTQRMFWDLESKSSPFRNIDFQPELIYITPTVGLTGDIAMTVQAGIRHESNGRDGPQSRSINSIYIAPMATLPIAGDYRLTFAPRLSLYVGNKSDNPDIVHYRGHAGLFMEVGEDNGLRLSTSTRFNFGSGKGAVNADLSYPLPRLLGGGPDLYLFAQSFYGYGENLLDYNRRTRRLRIGVALVR
SIO_010081: SIDU_RS20160
subclass of: SO_0000673
so part of: SIDU_RS20160
location: 29057..30265
location: region:29057-30265:1
so has part: feature:29057-30265:1:exon

WP_231923484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29057-30265:1:exon

SIDU_RS18950
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18950
old locus tag: SIDU_18600
so part of: sequence
location: complement(30313..31050)
location: region:30313-31050:-1
so has part: feature:30313-31050:-1:exon
subclass of: SO_0000010

position:30313:-1
position: 30313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31050:-1
position: 31050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30313-31050:-1:exon

SIDU_RS18950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18950
old locus tag: SIDU_18600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6118 family protein
translation: MMDEDEYREPDAGDDPALAFARVEDRLASVHGEVGLLRAAIAGLAATRESIEIPDYEPTLARTEKVLGVLVQQIDPIAKSPLLSMTPHNMAGEIVSAALHARREDQRLIAEARTGLDQAAREVGNRLASARRGDVQNRWLIGTGLGGAALGMLLYAALAGPVARMMPASWHWPERRAMHALGEPTMWDAGQRLMQTAAPESWALIVAASPLVDGNREAVQKCREQADKAKKPVRCTIEVRPDGGR
SIO_010081: SIDU_RS18950
subclass of: SO_0000673
so part of: SIDU_RS18950
location: complement(30313..31050)
location: region:30313-31050:-1
so has part: feature:30313-31050:-1:exon

WP_007686165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30313-31050:-1:exon

SIDU_RS18955
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
gene: traA
locus tag: SIDU_RS18955
old locus tag: SIDU_18605
so part of: sequence
location: complement(31058..34189)
location: region:31058-34189:-1
so has part: feature:31058-34189:-1:exon
subclass of: SO_0000010

position:31058:-1
position: 31058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34189:-1
position: 34189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31058-34189:-1:exon

SIDU_RS18955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
gene: traA
locus tag: SIDU_RS18955
old locus tag: SIDU_18605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015449240.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHFSAKVISRANGSSAVASAAYRAAERLHDDRLGRDHDFSNKAGVVHSEIMLPEGTPERLNDRATLWNEVEAGEKRKDAQLAREVEFSIPRELDQKEGIRLARDFVEKQFVERGMVADMNVHWDLGKDGQSKPHAHVMLSMREVGLEGFGQKVREWNSTALLQEWREAWADHVNERLAELDIDARIDHRSYEAQGIELEPQHKIGPAASRMPEQGLEAERVEDHARIARENGEKIIANPQIALDAITRQQATFTRRDLAQFAFRHSDGKDQFDQVMSAVRTSPELVALGKDGRGEDRFTSREMIDTEQRLERAGYGLADRAGHGLPAASKMGGRDTAERVGLALGSQQKDALAHITGKNDLAIVVGYAGTGKSTMLGVARDEWERAGYQVRGAALSGIAAEGLEGGSGIASRTIASMEYQWEQGRELLGPRDVLVIDEAGMIGTRQMERVLSEAERAGAKVILVGDAEQLQAIEAGAAFRSLAERYGAAEISDVRRQHEDWQKDATRALATGRTGEAIHAYAEHGMVHAAETREAARESLVEGWDRARIADPDKTRIILTHTNAEVRDLNLAARDRLRDAGELGQDVRVSAERGAREFATGDRIMFLKNDRGLGVKNGTLGKVERVSPDSMAVKLDDGRQVAFDLKDYAHVDHGYAATIHKSQGVTVDRAHVLATPGMDRHSAYVALSRHRDGVQLHYGRDDFADDRRLVRTLSRERAKDMASDYPMYRDRDAEAQSFADRRGLSGEIRVADAPERKGVEILAPRAGTSRQMGEDSRTPDIGGDRGAGEAKAAAERQSRRGMFDGLKLSAAPVKAAEPAQGAKEKPAPKRGMFDGLKLPQRTPTPEPAKELPARAEQGQDRDFRRAVERASRSAEAVLQARASGGPVLEHQKVALERAVQALDTLRPRASDDMAEAMKRDSGLLREAAAGRSGPMIEAIRQEARVRADPNLRADRFVERWQQLSQDRDRLYRAGDMAGRKTLGQEMAGMAKSLERDPQVESILRGRTRELGLEIGMSPGRELGRELSRGLGISHDRGLSR
SIO_010081: SIDU_RS18955
subclass of: SO_0000673
so part of: SIDU_RS18955
location: complement(31058..34189)
location: region:31058-34189:-1
so has part: feature:31058-34189:-1:exon

WP_007686163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31058-34189:-1:exon

SIDU_RS18960
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18960
old locus tag: SIDU_18610
so part of: sequence
location: 34364..34669
location: region:34364-34669:1
so has part: feature:34364-34669:1:exon
subclass of: SO_0000010

position:34364:1
position: 34364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34669:1
position: 34669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34364-34669:1:exon

SIDU_RS18960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18960
old locus tag: SIDU_18610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686162.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MRKVRDYDAELKALGDKARALKAKKVQQLGELVTSTGADALDLDVLAGVLLAAVESASADEKEAWRAKGSAFFQGRGRKAGRSTGGNAGGGSKTGAGETQG
SIO_010081: SIDU_RS18960
subclass of: SO_0000673
so part of: SIDU_RS18960
location: 34364..34669
location: region:34364-34669:1
so has part: feature:34364-34669:1:exon

WP_007686162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34364-34669:1:exon

SIDU_RS18965
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18965
old locus tag: SIDU_18615
so part of: sequence
location: 34707..34925
location: region:34707-34925:1
so has part: feature:34707-34925:1:exon
subclass of: SO_0000010

position:34707:1
position: 34707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34925:1
position: 34925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34707-34925:1:exon

SIDU_RS18965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18965
old locus tag: SIDU_18615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MARRERTRHLIELGGLVQKAGLVELADDDRATLYGALLELAAKAREDRDRLMLWKRRGKRAFDAEAEGRDAP
SIO_010081: SIDU_RS18965
subclass of: SO_0000673
so part of: SIDU_RS18965
location: 34707..34925
location: region:34707-34925:1
so has part: feature:34707-34925:1:exon

WP_007686160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34707-34925:1:exon

SIDU_RS18970
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18970
old locus tag: SIDU_18620
so part of: sequence
location: 34922..35203
location: region:34922-35203:1
so has part: feature:34922-35203:1:exon
subclass of: SO_0000010

position:34922:1
position: 34922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35203:1
position: 35203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34922-35203:1:exon

SIDU_RS18970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18970
old locus tag: SIDU_18620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004213319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRLDVEAIRAQVRALDFTRGTPAEVALWREDDADARANLAIEGMDLDLAEHALFDMLREESVPPPLATAIVLKLLDHPDADPTLAISPATIG
SIO_010081: SIDU_RS18970
subclass of: SO_0000673
so part of: SIDU_RS18970
location: 34922..35203
location: region:34922-35203:1
so has part: feature:34922-35203:1:exon

WP_007686159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34922-35203:1:exon

SIDU_RS18975
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18975
old locus tag: SIDU_18625
so part of: sequence
location: 35200..36135
location: region:35200-36135:1
so has part: feature:35200-36135:1:exon
subclass of: SO_0000010

position:35200:1
position: 35200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36135:1
position: 36135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35200-36135:1:exon

SIDU_RS18975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18975
old locus tag: SIDU_18625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MTMRTGLDHLPAVKRRELERVARVLFDEFEDAVKTKLSDKRKGGRILKLILFGSYARGDWVEDRASGYISDYDLLVVVNADTFTDLQTWWAVADDHLVRELTVTRHLATPVNFIVHSLMDVNDQLARGRPFFADIARDGIALYEAPGQALAVPRQLDAQERHAEALRHRDHWFPLAAHALKLARDSIADGVPRDAAFMLHQAVERVYNAVLLVLTLYAPKSHRLGILRSLAENLDPRLIEAWPRDTRAARRHFAQLQRAYVEARYSHAYEITADELAWLVDRVKHLHTIAGAICAEHLAGDDTPEKSPADE
SIO_010081: SIDU_RS18975
subclass of: SO_0000673
so part of: SIDU_RS18975
location: 35200..36135
location: region:35200-36135:1
so has part: feature:35200-36135:1:exon

WP_007686157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35200-36135:1:exon

SIDU_RS18980
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18980
old locus tag: SIDU_18630
so part of: sequence
location: 36128..36400
location: region:36128-36400:1
so has part: feature:36128-36400:1:exon
subclass of: SO_0000010

position:36128:1
position: 36128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36400:1
position: 36400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36128-36400:1:exon

SIDU_RS18980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18980
old locus tag: SIDU_18630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686155.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin VbhA family protein
translation: MNEHPISDDERARRQKAIDFARTNIELSGFALSPGMAALGVRFVAGELSESEYIAAALAHANSLPASAPAQDYFASLAELEAAWEARDRP
SIO_010081: SIDU_RS18980
subclass of: SO_0000673
so part of: SIDU_RS18980
location: 36128..36400
location: region:36128-36400:1
so has part: feature:36128-36400:1:exon

WP_007686155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36128-36400:1:exon

SIDU_RS18985
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18985
old locus tag: SIDU_18635
so part of: sequence
location: 36446..38122
location: region:36446-38122:1
so has part: feature:36446-38122:1:exon
subclass of: SO_0000010

position:36446:1
position: 36446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38122:1
position: 38122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36446-38122:1:exon

SIDU_RS18985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18985
old locus tag: SIDU_18635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013038680.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MEWFRQLGRAIRNLARIARTNPIWAITALVVSPVALIRHLFGVLVLFLITALVLGLGVPLILGKLLGLPRDSNIYQIVMMLTGLVIFLVTLRALFQPLILRYGGPAGDDTHGSARFATDRETKPLAQNGDGLLIGRDRKSGKLLRYAGPSHLLTIAPTRTGKGVGTIIPNLLDYPGSVICIDPKGENARITARHRARFGPVHVLDPFGVTGIASAAFNPLDRLDPAGLDLADDAMTLADALVYDAPGEAGEAHWNEEAKALIAGILLWVACDPQAQGQDRTLEALRDCLTFAPDNFQRMLREMSRSTQARGLIARAANRHLGKSDREAAGVLSAAQRHTHFLDSPRMSAVLGRSDFTFADVKAQPTTVYLVLPPDRLATYARWLRLMLAQGLTDLARAPASPARPVLFLLDEFAALGRLEPVERAMGLMAGYGIQLWPILQDVHQLRALYERRAGTFLSNAGVLQIFGVNDHDSAKLVSDLLGQETVVFETMSRAIDAEETGISFGSQHVARPLLTPDEVRTMPANLELLFLAGQRPIVATKLAYYADREFAGRFDKP
SIO_010081: SIDU_RS18985
subclass of: SO_0000673
so part of: SIDU_RS18985
location: 36446..38122
location: region:36446-38122:1
so has part: feature:36446-38122:1:exon

WP_007686152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36446-38122:1:exon

SIDU_RS18990
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18990
old locus tag: SIDU_18640
so part of: sequence
location: 38199..38630
location: region:38199-38630:1
so has part: feature:38199-38630:1:exon
subclass of: SO_0000010

position:38199:1
position: 38199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38630:1
position: 38630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38199-38630:1:exon

SIDU_RS18990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18990
old locus tag: SIDU_18640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017501681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQRVIDLWDRLMAYGESGSAPLPAIRDEVLELHAAITDEESRLGLMRIFNLVCDLVAVHLQETNGNVEAFAQHRQGQIWMFLRAECLVDGVLDRDRLRYVTGREVQAGRMTEDDPLRRYALGDDSAFDGLMAAPPPQKRTRH
SIO_010081: SIDU_RS18990
subclass of: SO_0000673
so part of: SIDU_RS18990
location: 38199..38630
location: region:38199-38630:1
so has part: feature:38199-38630:1:exon

WP_007686151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38199-38630:1:exon

SIDU_RS18995
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS18995
old locus tag: SIDU_18645
so part of: sequence
location: complement(39141..39671)
location: region:39141-39671:-1
so has part: feature:39141-39671:-1:exon
subclass of: SO_0000010

position:39141:-1
position: 39141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39671:-1
position: 39671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39141-39671:-1:exon

SIDU_RS18995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS18995
old locus tag: SIDU_18645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686150.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MMMTGAPIKLTQADAADVADLYNRCSDYFLLQDGAAPTLDDARELFSDVPPEKSAHNQAVLGWKGPGGLYAIAAILRDYPRDGTWYLGFMIVDAAQRGRGVGRSIYSTVESWAAARGATEIRLAVLEANEAAERFWRSLGFIEYRRVGPDTFKMRSHRRIELSRRLSGATVEGSNK
SIO_010081: SIDU_RS18995
subclass of: SO_0000673
so part of: SIDU_RS18995
location: complement(39141..39671)
location: region:39141-39671:-1
so has part: feature:39141-39671:-1:exon

WP_007686150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39141-39671:-1:exon

SIDU_RS19000
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS19000
old locus tag: SIDU_18650
so part of: sequence
location: complement(39668..40288)
location: region:39668-40288:-1
so has part: feature:39668-40288:-1:exon
subclass of: SO_0000010

position:39668:-1
position: 39668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40288:-1
position: 40288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39668-40288:-1:exon

SIDU_RS19000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS19000
old locus tag: SIDU_18650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSKADGSQSLDLQHDALRAAGVEPGNIYDDRASGSRDDRPGLAACLKSLRDGDVLIVWKLDRLGRTLTHLVSTVQNLSDRGIGLRVLTGKGAQIDTTTPSGRMVFGIFATLAEFERDMIRERTMAGLAAARARGRKGGRKFALSKAQVRLAQAAMAQRDTSVSDLCKELGIERVTLYRYVGPNGELRDYGQRALAAKTR
SIO_010081: SIDU_RS19000
subclass of: SO_0000673
so part of: SIDU_RS19000
location: complement(39668..40288)
location: region:39668-40288:-1
so has part: feature:39668-40288:-1:exon

WP_007686149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39668-40288:-1:exon

SIDU_RS19005
type: Gene
subclass of: SO_0000704
RO_0002162: 861109
locus tag: SIDU_RS19005
old locus tag: SIDU_18655
so part of: sequence
location: 40414..43305
location: region:40414-43305:1
so has part: feature:40414-43305:1:exon
subclass of: SO_0000010

position:40414:1
position: 40414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43305:1
position: 43305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40414-43305:1:exon

SIDU_RS19005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 861109
locus tag: SIDU_RS19005
old locus tag: SIDU_18655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512303.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRVTLTDRQREALLHLPVDQGELLRHYTLSDEDLGHIRQRRRAHNRFGFALQLCVLRYPGRVLAPGELIPAQVSDFIAAQLGLTSDDLLLYAAREETRHEHLADLRRIYGYRSFSGRGARDLREWIAREAEAATSNEDLARRFVAECRRTRTILPGSSTIERLCADALVEAERRIEDLIAHRITPTLSENLAHLLEDTVDGRVTRFVWLRQFEVGANSAAANRLMDRLEYLQRFDLPADLLDGVPAHRVTRLRRQGERYYADGMRDLPEDRRLAILAVCTLEWRSSLADVIVETHDRIVGRLYRASERLCNTRIADEKAAVRDTLKSFAEIGGALLGAQDDGTALDGIIATGPGWERFRTLVATASALTNVLAADPLSRVLDGYHRFRLYAPRMLRLLDMQAAPIATPLLAAVAMLRNGIKVDPPVDFLRPNSKWHRHLRAEPSGDHRLWEIAVLFHIRDAFRSGDIWLAGSRRYGDLKQLLVPPQAIEQTARLAVPLRPGEWLAERRARLDTRLKEFGRAARTGTIPGGIIENGKLHIDKLRADTPEGAEDLVLDLYQQLPPARITDLLLEVDERTGFSEAFTHLRTGAPCSDRIGLMNVLLAEGVNLGLRKMAAATNTHSFWELLRIARWHVEGSAYDRALAMIVEAHAALPMAAFWGQGQSASSDGQFFLATEQGEAMNLINAKYGNVPGLKGYSHVSDQYAPFATQVIPATVSEAPYILDGLLMNDAGRRVRQHFADTGGFTDHVFAACALLGYRFAPRIRDLPQKRLYAFTPNATPANVRALVGGKINEPLIERNWPDILRIMATIAAGIVAPSQILRKLASYPRQNELALALREVGRIERTLFMIDWILDAGLQRQAQIGLNKGEAHHALKRAISFHRRGEIRDRSGEGQHYRIAGMNLLAAIIIFWNTMKLGEVVNTRAASGTHIEPDLLAHVSPLGWEHINLTGEYRWPKSLA
SIO_010081: SIDU_RS19005
subclass of: SO_0000673
so part of: SIDU_RS19005
location: 40414..43305
location: region:40414-43305:1
so has part: feature:40414-43305:1:exon

WP_007686148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40414-43305:1:exon