Chlamydia pecorum strain DBDeUG_2018 plasmid pCpecDBDeUG_2018, complete sequence.
Chlamydia pecorum (Chlamydophila pecorum)
Bacteria; Chlamydiota; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.
Completing the Genome Sequence of Chlamydia pecorum Strains MC/MarsBar and DBDeUG: New Insights into This Enigmatic Koala (Phascolarctos cinereus) Pathogen
Submitted (26-JUL-2021) Chlamydia Research Group, University of the Sunshine Coast, Sippy Downs Drive, Sippy Downs, QLD 4556, Australia
REFSEQ INFORMATION: The reference sequence is identical to\nCP080402.1.\nBacteria and source DNA available from Chlamydia pecorum.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 11-JUL-2021\nAssembly Method :: Velvet v. 1.2.10\nAssembly Name :: DBDeUG_2018_F_ST69\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 3703.1x\nSequencing Technology :: Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/15/2022 04:45:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 992\nCDSs (total) :: 948\nGenes (coding) :: 947\nCDSs (with protein) :: 947\nGenes (RNA) :: 44\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 38\nncRNAs :: 3\nPseudo Genes (total) :: 1\nCDSs (without protein) :: 1\nPseudo Genes (ambiguous residues) :: 0 of 1\nPseudo Genes (frameshifted) :: 1 of 1\nPseudo Genes (incomplete) :: 0 of 1\nPseudo Genes (internal stop) :: 0 of 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012718315.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020358470.1
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014951478.1
COORDINATES: similar to AA sequence:RefSeq:WP_014951470.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209817.1
COORDINATES: similar to AA sequence:RefSeq:WP_014518306.1
COORDINATES: similar to AA sequence:RefSeq:WP_006343673.1