Sceloporus undulatus isolate JIND9_A2432 ecotype Alabama chromosome 11, SceUnd_v1.1, whole genome shotgun sequence.
type: Entry
definition: Sceloporus undulatus isolate JIND9_A2432 ecotype Alabama chromosome 11, SceUnd_v1.1, whole genome shotgun sequence.
sequence version: NC_056532.1
sequence date: 2021-07-19
sequence: sequence
division: CON
label: NC_056532.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA746303
dblink: SAMN14373011
keyword: WGS
keyword: RefSeq
source: Sceloporus undulatus (fence lizard)
organism: Sceloporus undulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM032829.1.\nAssembly name: SceUnd_v1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Auburn University on\n2021/07/08. The original whole-genome shotgun project has the\naccession JAGXEY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Auburn University\nAssembly Date :: 01-AUG-2017\nAssembly Method :: SuperNova v. 2016; HiRise v. August 2017;\n PBJelly v. September 2017\nAssembly Name :: SceUnd_v1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 4859.0x\nSequencing Technology :: Illumina HiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Sceloporus undulatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12783370
topology: linear
so has quality: SO_0000987
location: 1..12783370
location: region:1-12783370:1
RO_0002162: 8520

NC_056532
type: RefSeq
SIO_000068: refseq

PRJNA746303
type: BioProject
SIO_000068: bioproject

SAMN14373011
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12783370:1
position: 12783370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12783370:1:source
so part of: sequence
organism: Sceloporus undulatus
mol type: genomic DNA
isolate: JIND9_A2432
isolation source: the sample came from two individuals: brain sample from one juvenile (IND9) and blood, liver, muscle, tail, brain samples from one adult (Adult2432)
chromosome: 11
sex: male
ecotype: Alabama
country: USA
lat lon: 31.0915 N 86.5454 W
collection date: 2016-08-14/2017-04-26

8520
type: Taxonomy
SIO_000068: taxonomy

LOC121916963
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9427..22946)
location: region:9427-22946:-1
so has part: feature:9427-22946:-1:exon
subclass of: SO_0000010

121916963
type: Gene
SIO_000068: ncbigene

position:9427:-1
position: 9427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22946:-1
position: 22946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9427-22946:-1:exon

LOC121916963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916963
product: WSC domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442555.1
SIO_010081: LOC121916963
subclass of: SO_0000673
so part of: LOC121916963
location: complement(join(9427..10325,12526..12726,14050..14214,14754..14931,22935..22946))
location: region:9427-22946:-1
so has part: feature:22935-22946:-1:exon
so has part: feature:14754-14931:-1:exon
so has part: feature:14050-14214:-1:exon
so has part: feature:12526-12726:-1:exon
so has part: feature:9427-10325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22935-22946:-1:exon

position:22935:-1
position: 22935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14754-14931:-1:exon

position:14754:-1
position: 14754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14931:-1
position: 14931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14050-14214:-1:exon

position:14050:-1
position: 14050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14214:-1
position: 14214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12526-12726:-1:exon

position:12526:-1
position: 12526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12726:-1
position: 12726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9427-10325:-1:exon

position:10325:-1
position: 10325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WSC domain-containing protein 1-like
translation: MQAQEFPLAVIRGPQCHCGFPTIHFPLGNNSDKSLCIVSQNASSVAKISREEDYRLVYQTPVQDTRCTDRRFLPTKSKAFVALSSFPGAGNTWVRHLIEHATGFYTGSYYFDGTLYNKGFKGEKDHWRSRRTICVKTHESGKKEIEMFDSAILLIRNPYKSLVAEFNRKCAGHLGYATDRNWKSKEWPEFVNSYASWWASHVLDWLKYGKHLLVIHYEDLKQALLPKLKEIVAFLNITVTEDRLFCVENNRDGNFKRSGAWQKTFEPFTKEMKELINTYIVTVDKALKERNFIGLPKEYLPR
SIO_010081: LOC121916963
subclass of: SO_0000673
so part of: LOC121916963
location: complement(join(9973..10325,12526..12726,14050..14214,14754..14931,22935..22946))
location: region:9973-22946:-1
so has part: feature:22935-22946:-1:exon
so has part: feature:14754-14931:-1:exon
so has part: feature:14050-14214:-1:exon
so has part: feature:12526-12726:-1:exon
so has part: feature:9973-10325:-1:exon

XP_042298489.1
type: Protein
SIO_000068: ncbiprotein

position:9973:-1
position: 9973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22935-22946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14754-14931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14050-14214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12526-12726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9973-10325:-1:exon

LOC121916964
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(421719..438796)
location: region:421719-438796:-1
so has part: feature:421719-438796:-1:exon
subclass of: SO_0000010

121916964
type: Gene
SIO_000068: ncbigene

position:421719:-1
position: 421719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438796:-1
position: 438796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421719-438796:-1:exon

LOC121916964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916964
product: polypeptide N-acetylgalactosaminyltransferase 17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442556.1
SIO_010081: LOC121916964
subclass of: SO_0000673
so part of: LOC121916964
location: complement(join(421719..421803,427097..427296,428405..428500,429961..430098,438626..438796))
location: region:421719-438796:-1
so has part: feature:438626-438796:-1:exon
so has part: feature:429961-430098:-1:exon
so has part: feature:428405-428500:-1:exon
so has part: feature:427097-427296:-1:exon
so has part: feature:421719-421803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438626-438796:-1:exon

position:438626:-1
position: 438626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429961-430098:-1:exon

position:429961:-1
position: 429961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430098:-1
position: 430098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428405-428500:-1:exon

position:428405:-1
position: 428405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428500:-1
position: 428500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:427097-427296:-1:exon

position:427097:-1
position: 427097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427296:-1
position: 427296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:421719-421803:-1:exon

position:421803:-1
position: 421803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 17-like
translation: MKVLTPTQTQCVSKGPPGPFVIYADIFIVLCGSRLAVMSFRNGSGRGPVEGCGTVAANPGIDIGDVSERKALRKTLKCKNFQWYLDHVYPEMRRYNNTIAYGELRNNKVKDVCLDQGPQENHTAILYPCHGWGPQLARYTKEGFLHLGALGTTVLLPDTRCLVDNMKSRFPQLLDCDKVKSSLHKRWNFIQVLYRFYTFSQRQLPPFLNILLGYELQAYMKEGETNSTD
SIO_010081: LOC121916964
subclass of: SO_0000673
so part of: LOC121916964
location: complement(join(421719..421803,427097..427296,428405..428500,429961..430098,438626..438796))
location: region:421719-438796:-1
so has part: feature:438626-438796:-1:exon
so has part: feature:429961-430098:-1:exon
so has part: feature:428405-428500:-1:exon
so has part: feature:427097-427296:-1:exon
so has part: feature:421719-421803:-1:exon

XP_042298490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438626-438796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429961-430098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428405-428500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427097-427296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:421719-421803:-1:exon

LOC121916965
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(520095..562095)
location: region:520095-562095:-1
so has part: feature:520095-562095:-1:exon
subclass of: SO_0000010

121916965
type: Gene
SIO_000068: ncbigene

position:520095:-1
position: 520095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562095:-1
position: 562095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520095-562095:-1:exon

LOC121916965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916965
product: autism susceptibility gene 2 protein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442558.1
SIO_010081: LOC121916965
subclass of: SO_0000673
so part of: LOC121916965
location: complement(join(520095..523402,525241..525463,536960..537043,540082..540159,548098..548156,548418..548510,550597..550641,555268..555488,558117..558409,559010..559475,562020..562095))
location: region:520095-562095:-1
so has part: feature:562020-562095:-1:exon
so has part: feature:559010-559475:-1:exon
so has part: feature:558117-558409:-1:exon
so has part: feature:555268-555488:-1:exon
so has part: feature:550597-550641:-1:exon
so has part: feature:548418-548510:-1:exon
so has part: feature:548098-548156:-1:exon
so has part: feature:540082-540159:-1:exon
so has part: feature:536960-537043:-1:exon
so has part: feature:525241-525463:-1:exon
so has part: feature:520095-523402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562020-562095:-1:exon

position:562020:-1
position: 562020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559010-559475:-1:exon

position:559010:-1
position: 559010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559475:-1
position: 559475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558117-558409:-1:exon

position:558117:-1
position: 558117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558409:-1
position: 558409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555268-555488:-1:exon

position:555268:-1
position: 555268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555488:-1
position: 555488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550597-550641:-1:exon

position:550597:-1
position: 550597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550641:-1
position: 550641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:548418-548510:-1:exon

position:548418:-1
position: 548418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548510:-1
position: 548510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:548098-548156:-1:exon

position:548098:-1
position: 548098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548156:-1
position: 548156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540082-540159:-1:exon

position:540082:-1
position: 540082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540159:-1
position: 540159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:536960-537043:-1:exon

position:536960:-1
position: 536960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537043:-1
position: 537043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:525241-525463:-1:exon

position:525241:-1
position: 525241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525463:-1
position: 525463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:520095-523402:-1:exon

position:523402:-1
position: 523402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916965
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: autism susceptibility gene 2 protein-like
translation: MAPTRCQHRGTRRQNTPPSIPALQADTDLVVGALKENEDQDARTLSAPKISGLERSQERSQDSDKDPLLDPVVPQNLCPQVSQPFVPPHLESSLETHSPIPAVIQRSEPSRSSQPEAPQKLQTSEVAQHPTTPPSQIQRPLRPPSPGHQNLPSSQLRPPSCSLAQQLSGYNSSSLSINSLSSSRSSTPAKTQLPPPPPPPPPPPPLPPPHIAHHTSASPFPLSLPNHNPLHTFPPTLQPPPHSHHPNMFAPPTALPPPPPLTSGTLQVPGHPAGSAYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPSAIMPTPAPPMFDKYPTKVDPFYRHSLFHSYPPAVSGIXPMIPPTXPFGSLQGAFNPRRRGHDVFAAPRGCLERPFHGAAHHTGPPFGHPPHHSNFLNPAAHLETFNRPTTFTSLAAVSSNAFGGLGNPAVTPNAMFSHKECPSIQSFNNPHEPWNRLHRTPPSFPTPPPWLKPGELERSTSAAAHERDRDLDKGDSSLNKDDKERESMEKRHSRHPSPAPIHSVNSLGHSRSSAEQIRSHLNPEVREKEKNKERERDHSESRKDTSIDEHKVKDNYISDKDSLTHENRPLEESKQASRVSSPYTRPPVVENTRPNSTSSRDAEKKTEPAYENLKKSSEIKVKEERKEDHDIPPEPSQPHRPPEQPPPVPTSNVHSAPLVSMPMTVGVTGIHPMNSISGLDRTRLMTPFMGISPVPGGERFPYPSFHWDPMRDAYRDLDIHRRDPLGREFLLRSDPLHRLSAPRLYEAERTFRDREPHDYNHHHHALSVDPRREHERGAHLDERERLHMLREDYEHVRLHSVHQAALDGHLPHPGLIAPGLPSMHYPRVSPTSGLPNGILNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSTEMRDRPPSHTLKDIEAR
SIO_010081: LOC121916965
subclass of: SO_0000673
so part of: LOC121916965
location: complement(join(522184..523402,525241..525463,536960..537043,540082..540159,548098..548156,548418..548510,550597..550641,555268..555488,558117..558409,559010..559475,562020..562095))
location: region:522184-562095:-1
so has part: feature:562020-562095:-1:exon
so has part: feature:559010-559475:-1:exon
so has part: feature:558117-558409:-1:exon
so has part: feature:555268-555488:-1:exon
so has part: feature:550597-550641:-1:exon
so has part: feature:548418-548510:-1:exon
so has part: feature:548098-548156:-1:exon
so has part: feature:540082-540159:-1:exon
so has part: feature:536960-537043:-1:exon
so has part: feature:525241-525463:-1:exon
so has part: feature:522184-523402:-1:exon

XP_042298492.1
type: Protein
SIO_000068: ncbiprotein

position:522184:-1
position: 522184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562020-562095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559010-559475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558117-558409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555268-555488:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550597-550641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548418-548510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548098-548156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540082-540159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536960-537043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525241-525463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522184-523402:-1:exon

LOC121916876
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(873909..1260542)
location: region:873909-1260542:-1
so has part: feature:873909-1260542:-1:exon
subclass of: SO_0000010

121916876
type: Gene
SIO_000068: ncbigene

position:873909:-1
position: 873909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260542:-1
position: 1260542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873909-1260542:-1:exon

LOC121916876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916876
product: autism susceptibility gene 2 protein homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442407.1
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(873909..874140,999544..999579,1032994..1033095,1145288..1145497,1259989..1260542))
location: region:873909-1260542:-1
so has part: feature:1259989-1260542:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:873909-874140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260542:-1:exon

position:1259989:-1
position: 1259989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

position:1145288:-1
position: 1145288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145497:-1
position: 1145497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

position:1032994:-1
position: 1032994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033095:-1
position: 1033095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

position:999544:-1
position: 999544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999579:-1
position: 999579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:873909-874140:-1:exon

position:874140:-1
position: 874140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein homolog isoform X2
translation: MDPSSLLCSGGFRQKRRSRSQRDHRRHRRRRLEGCKGGFQAEDGGAGAAEAPLPPRSPRPLGHRRHRRRRRPPSLFSSSSSSCSSSSSSGSEPDPPGPLLGPPPRPLAPRPRPPRRKRRQSSSPEEDIIDGFAMASFVSFEALEKDVPVKPVDPVESHQNPLEKKKRNMLSNGLLYHLKKNRPHRHRYGSDRENDRNLCQHLRKRKKLLKGLRQLNPSQNGCRDSDSESASGESKEFQRSSSRERLSDTSASSSLGTGYFIQLTHENNGRCLRGDHQRKRTPFLHPTFQMRSEGRKSICR
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(874018..874140,999544..999579,1032994..1033095,1145288..1145497,1259989..1260420))
location: region:874018-1260420:-1
so has part: feature:1259989-1260420:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:874018-874140:-1:exon

XP_042298341.1
type: Protein
SIO_000068: ncbiprotein

position:874018:-1
position: 874018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260420:-1
position: 1260420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874018-874140:-1:exon

LOC121916876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916876
product: autism susceptibility gene 2 protein homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442406.1
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(914454..914936,999544..999579,1032994..1033095,1145288..1145497,1259989..1260542))
location: region:914454-1260542:-1
so has part: feature:1259989-1260542:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:914454-914936:-1:exon

position:914454:-1
position: 914454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914454-914936:-1:exon

position:914936:-1
position: 914936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein homolog isoform X1
translation: MDPSSLLCSGGFRQKRRSRSQRDHRRHRRRRLEGCKGGFQAEDGGAGAAEAPLPPRSPRPLGHRRHRRRRRPPSLFSSSSSSCSSSSSSGSEPDPPGPLLGPPPRPLAPRPRPPRRKRRQSSSPEEDIIDGFAMASFVSFEALEKDVPVKPVDPVESHQNPLEKKKRNMLSNGLLYHLKKNRPHRHRYGSDRENDRNLCQHLRKRKKLLKGLRQLNPSQNGCRDSDSESASGESKEFQRSSSRERLSDTSASSSLGTGYFGLAKEQCALRGWMRNVSSFCKGNNTSHKAPQIPNGIYPVHTAWTQCGLWPDVYICPDYRRHWCTDHEEMFLFAHMYTYMLYSRSAMQGSSALRPCY
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(914646..914936,999544..999579,1032994..1033095,1145288..1145497,1259989..1260420))
location: region:914646-1260420:-1
so has part: feature:1259989-1260420:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:914646-914936:-1:exon

XP_042298340.1
type: Protein
SIO_000068: ncbiprotein

position:914646:-1
position: 914646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914646-914936:-1:exon

LOC121916876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916876
product: autism susceptibility gene 2 protein homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_042442410.1
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(914794..915009,999544..999579,1032994..1033095,1145288..1145497,1259989..1260542))
location: region:914794-1260542:-1
so has part: feature:1259989-1260542:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:914794-915009:-1:exon

position:914794:-1
position: 914794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914794-915009:-1:exon

position:915009:-1
position: 915009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein homolog isoform X5
translation: MDPSSLLCSGGFRQKRRSRSQRDHRRHRRRRLEGCKGGFQAEDGGAGAAEAPLPPRSPRPLGHRRHRRRRRPPSLFSSSSSSCSSSSSSGSEPDPPGPLLGPPPRPLAPRPRPPRRKRRQSSSPEEDIIDGFAMASFVSFEALEKDVPVKPVDPVESHQNPLEKKKRNMLSNGLLYHLKKNRPHRHRYGSDRENDRNLCQHLRKRKKLLKGLRQLNPSQNGCRDSDSESASGESKEFQRSSSRERLSDTSASSSLGTGYFDTF
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(914998..915009,999544..999579,1032994..1033095,1145288..1145497,1259989..1260420))
location: region:914998-1260420:-1
so has part: feature:1259989-1260420:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:914998-915009:-1:exon

XP_042298344.1
type: Protein
SIO_000068: ncbiprotein

position:914998:-1
position: 914998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914998-915009:-1:exon

LOC121916876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916876
product: autism susceptibility gene 2 protein homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442408.1
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(929822..929942,999544..999579,1032994..1033095,1145288..1145497,1259989..1260542))
location: region:929822-1260542:-1
so has part: feature:1259989-1260542:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:929822-929942:-1:exon

position:929822:-1
position: 929822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929822-929942:-1:exon

position:929942:-1
position: 929942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein homolog isoform X3
translation: MDPSSLLCSGGFRQKRRSRSQRDHRRHRRRRLEGCKGGFQAEDGGAGAAEAPLPPRSPRPLGHRRHRRRRRPPSLFSSSSSSCSSSSSSGSEPDPPGPLLGPPPRPLAPRPRPPRRKRRQSSSPEEDIIDGFAMASFVSFEALEKDVPVKPVDPVESHQNPLEKKKRNMLSNGLLYHLKKNRPHRHRYGSDRENDRNLCQHLRKRKKLLKGLRQLNPSQNGCRDSDSESASGESKEFQRSSSRERLSDTSASSSLGTGYFRSKTKSEPIGSPGTSGSRMLSSCKKKTSI
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(929853..929942,999544..999579,1032994..1033095,1145288..1145497,1259989..1260420))
location: region:929853-1260420:-1
so has part: feature:1259989-1260420:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:929853-929942:-1:exon

XP_042298342.1
type: Protein
SIO_000068: ncbiprotein

position:929853:-1
position: 929853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929853-929942:-1:exon

LOC121916876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916876
product: autism susceptibility gene 2 protein homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442409.1
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(964839..964922,999544..999579,1032994..1033095,1145288..1145497,1259989..1260542))
location: region:964839-1260542:-1
so has part: feature:1259989-1260542:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:964839-964922:-1:exon

position:964839:-1
position: 964839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964839-964922:-1:exon

position:964922:-1
position: 964922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein homolog isoform X4
translation: MDPSSLLCSGGFRQKRRSRSQRDHRRHRRRRLEGCKGGFQAEDGGAGAAEAPLPPRSPRPLGHRRHRRRRRPPSLFSSSSSSCSSSSSSGSEPDPPGPLLGPPPRPLAPRPRPPRRKRRQSSSPEEDIIDGFAMASFVSFEALEKDVPVKPVDPVESHQNPLEKKKRNMLSNGLLYHLKKNRPHRHRYGSDRENDRNLCQHLRKRKKLLKGLRQLNPSQNGCRDSDSESASGESKEFQRSSSRERLSDTSASSSLGTGYFLGTISIKRKATSEGGEGRKTQN
SIO_010081: LOC121916876
subclass of: SO_0000673
so part of: LOC121916876
location: complement(join(964854..964922,999544..999579,1032994..1033095,1145288..1145497,1259989..1260420))
location: region:964854-1260420:-1
so has part: feature:1259989-1260420:-1:exon
so has part: feature:1145288-1145497:-1:exon
so has part: feature:1032994-1033095:-1:exon
so has part: feature:999544-999579:-1:exon
so has part: feature:964854-964922:-1:exon

XP_042298343.1
type: Protein
SIO_000068: ncbiprotein

position:964854:-1
position: 964854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259989-1260420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145288-1145497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032994-1033095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999544-999579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964854-964922:-1:exon

LOC121916966
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1424084..1430496
location: region:1424084-1430496:1
so has part: feature:1424084-1430496:1:exon
subclass of: SO_0000010

121916966
type: Gene
SIO_000068: ncbigene

position:1424084:1
position: 1424084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430496:1
position: 1430496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424084-1430496:1:exon

LOC121916966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916966
product: CAP-Gly domain-containing linker protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442559.1
SIO_010081: LOC121916966
subclass of: SO_0000673
so part of: LOC121916966
location: join(1424084..1425411,1427284..1427341,1428038..1428121,1430423..1430496)
location: region:1424084-1430496:1
so has part: feature:1424084-1425411:1:exon
so has part: feature:1427284-1427341:1:exon
so has part: feature:1428038-1428121:1:exon
so has part: feature:1430423-1430496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1424084-1425411:1:exon

position:1425411:1
position: 1425411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427284-1427341:1:exon

position:1427284:1
position: 1427284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427341:1
position: 1427341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1428038-1428121:1:exon

position:1428038:1
position: 1428038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428121:1
position: 1428121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1430423-1430496:1:exon

position:1430423:1
position: 1430423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121916966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAP-Gly domain-containing linker protein 2-like
translation: MGLMDNWKSKLDTLASDHQKSLEDLKATLNTGPDTQHKEIVELKAVVESIKMEHQLELENLKAKHDIEMAVHVKEKESLKLKLQEAKDEVEENNNNWKTQLETKTNQHLVEIQALKDKCRDADLRVHELEKLHSDYKDQAQAIAFLKEQVSLAEKKMLDYETQKPESQSKQEIQRLQETILVLENKLQSMEPLHPSQHANMIETNDISEEKIKMKQTMEDLQDKLSKKDKEVSSLVSQTDTLRTQVSEIPNFMSSQVILDFNSQKPSAKRG
SIO_010081: LOC121916966
subclass of: SO_0000673
so part of: LOC121916966
location: join(1424812..1425411,1427284..1427341,1428038..1428121,1430423..1430496)
location: region:1424812-1430496:1
so has part: feature:1424812-1425411:1:exon
so has part: feature:1427284-1427341:1:exon
so has part: feature:1428038-1428121:1:exon
so has part: feature:1430423-1430496:1:exon

XP_042298493.1
type: Protein
SIO_000068: ncbiprotein

position:1424812:1
position: 1424812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424812-1425411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427284-1427341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428038-1428121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430423-1430496:1:exon

LOC121916967
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1449367..1455515
location: region:1449367-1455515:1
so has part: feature:1449367-1455515:1:exon
subclass of: SO_0000010

121916967
type: Gene
SIO_000068: ncbigene

position:1449367:1
position: 1449367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455515:1
position: 1455515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449367-1455515:1:exon

LOC121916967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916967
product: neutrophil cytosol factor 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442560.1
SIO_010081: LOC121916967
subclass of: SO_0000673
so part of: LOC121916967
location: join(1449367..1449778,1451259..1451343,1452522..1452595,1453219..1453381,1455389..1455515)
location: region:1449367-1455515:1
so has part: feature:1449367-1449778:1:exon
so has part: feature:1451259-1451343:1:exon
so has part: feature:1452522-1452595:1:exon
so has part: feature:1453219-1453381:1:exon
so has part: feature:1455389-1455515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1449367-1449778:1:exon

position:1449778:1
position: 1449778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1451259-1451343:1:exon

position:1451259:1
position: 1451259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451343:1
position: 1451343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452522-1452595:1:exon

position:1452522:1
position: 1452522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452595:1
position: 1452595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1453219-1453381:1:exon

position:1453219:1
position: 1453219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453381:1
position: 1453381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1455389-1455515:1:exon

position:1455389:1
position: 1455389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121916967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916967
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neutrophil cytosol factor 1-like
translation: MGDSRAYIRHIELLGFEKRFFPSQHYVYMFLVKWHDLTEKVVYRKFTEIYEFHVKNSEEMFPIESGXINVENRIIPHLPAPRWFDTNRSPKKTKHALRYSSALINLPRKISRCEHVLNFFRVKPDDLNPPTAGQAPDSTAFGRSLSHRASSLCITGPIILQDYPAIADYEEELQH
SIO_010081: LOC121916967
subclass of: SO_0000673
so part of: LOC121916967
location: join(1449701..1449778,1451259..1451343,1452522..1452595,1453219..1453381,1455389..1455515)
location: region:1449701-1455515:1
so has part: feature:1449701-1449778:1:exon
so has part: feature:1451259-1451343:1:exon
so has part: feature:1452522-1452595:1:exon
so has part: feature:1453219-1453381:1:exon
so has part: feature:1455389-1455515:1:exon

XP_042298494.1
type: Protein
SIO_000068: ncbiprotein

position:1449701:1
position: 1449701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449701-1449778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451259-1451343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1452522-1452595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453219-1453381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455389-1455515:1:exon

CASTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1459534..1488009
location: region:1459534-1488009:1
so has part: feature:1459534-1488009:1:exon
subclass of: SO_0000010

121916968
type: Gene
SIO_000068: ncbigene

position:1459534:1
position: 1459534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488009:1
position: 1488009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459534-1488009:1:exon

CASTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: CASTOR2
product: cytosolic arginine sensor for mTORC1 subunit 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442561.1
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(1459534..1459577,1465230..1465300,1479772..1479965,1480937..1481069,1481452..1481575,1482272..1482382,1483434..1483516,1484624..1484718,1486977..1488009)
location: region:1459534-1488009:1
so has part: feature:1459534-1459577:1:exon
so has part: feature:1465230-1465300:1:exon
so has part: feature:1479772-1479965:1:exon
so has part: feature:1480937-1481069:1:exon
so has part: feature:1481452-1481575:1:exon
so has part: feature:1482272-1482382:1:exon
so has part: feature:1483434-1483516:1:exon
so has part: feature:1484624-1484718:1:exon
so has part: feature:1486977-1488009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1459534-1459577:1:exon

position:1459577:1
position: 1459577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1465230-1465300:1:exon

position:1465230:1
position: 1465230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465300:1
position: 1465300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479772-1479965:1:exon

position:1479772:1
position: 1479772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479965:1
position: 1479965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1480937-1481069:1:exon

position:1480937:1
position: 1480937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481069:1
position: 1481069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1481452-1481575:1:exon

position:1481452:1
position: 1481452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481575:1
position: 1481575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1482272-1482382:1:exon

position:1482272:1
position: 1482272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482382:1
position: 1482382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1483434-1483516:1:exon

position:1483434:1
position: 1483434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483516:1
position: 1483516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1484624-1484718:1:exon

position:1484624:1
position: 1484624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484718:1
position: 1484718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1486977-1488009:1:exon

position:1486977:1
position: 1486977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CASTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic arginine sensor for mTORC1 subunit 2
translation: MDPSYEVQIPSNPVRCKFFSLTETPEDYTIIVDEEGFLELPSSEHLSVADATWLALNVVSGGGSFSSSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPLAMHTLASEFTILRVVNGETVAADSFGITNGFMKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPSVATLLMDVMFYSNGVKESAAANEDSGHIRFFSFSLIEGYISLVMDVQTQKRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVINALQVSQAEKH
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(1459534..1459577,1465230..1465300,1479772..1479965,1480937..1481069,1481452..1481575,1482272..1482382,1483434..1483516,1484624..1484718,1486977..1487042)
location: region:1459534-1487042:1
so has part: feature:1459534-1459577:1:exon
so has part: feature:1465230-1465300:1:exon
so has part: feature:1479772-1479965:1:exon
so has part: feature:1480937-1481069:1:exon
so has part: feature:1481452-1481575:1:exon
so has part: feature:1482272-1482382:1:exon
so has part: feature:1483434-1483516:1:exon
so has part: feature:1484624-1484718:1:exon
so has part: feature:1486977-1487042:1:exon

XP_042298495.1
type: Protein
SIO_000068: ncbiprotein

position:1487042:1
position: 1487042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459534-1459577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465230-1465300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479772-1479965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1480937-1481069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1481452-1481575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1482272-1482382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1483434-1483516:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484624-1484718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1486977-1487042:1:exon

RCC1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1488778..1501880)
location: region:1488778-1501880:-1
so has part: feature:1488778-1501880:-1:exon
subclass of: SO_0000010

121916945
type: Gene
SIO_000068: ncbigene

position:1488778:-1
position: 1488778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501880:-1
position: 1501880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1488778-1501880:-1:exon

RCC1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: RCC1L
product: RCC1 like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442523.1
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(1488778..1490435,1491063..1491148,1492869..1493042,1493703..1493787,1494322..1494503,1495904..1495988,1496922..1496973,1497474..1497540,1499480..1499608,1500921..1501050,1501506..1501880))
location: region:1488778-1501880:-1
so has part: feature:1501506-1501880:-1:exon
so has part: feature:1500921-1501050:-1:exon
so has part: feature:1499480-1499608:-1:exon
so has part: feature:1497474-1497540:-1:exon
so has part: feature:1496922-1496973:-1:exon
so has part: feature:1495904-1495988:-1:exon
so has part: feature:1494322-1494503:-1:exon
so has part: feature:1493703-1493787:-1:exon
so has part: feature:1492869-1493042:-1:exon
so has part: feature:1491063-1491148:-1:exon
so has part: feature:1488778-1490435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1501506-1501880:-1:exon

position:1501506:-1
position: 1501506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1500921-1501050:-1:exon

position:1500921:-1
position: 1500921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501050:-1
position: 1501050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1499480-1499608:-1:exon

position:1499480:-1
position: 1499480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499608:-1
position: 1499608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1497474-1497540:-1:exon

position:1497474:-1
position: 1497474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497540:-1
position: 1497540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1496922-1496973:-1:exon

position:1496922:-1
position: 1496922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496973:-1
position: 1496973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1495904-1495988:-1:exon

position:1495904:-1
position: 1495904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495988:-1
position: 1495988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1494322-1494503:-1:exon

position:1494322:-1
position: 1494322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494503:-1
position: 1494503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1493703-1493787:-1:exon

position:1493703:-1
position: 1493703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493787:-1
position: 1493787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1492869-1493042:-1:exon

position:1492869:-1
position: 1492869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493042:-1
position: 1493042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1491063-1491148:-1:exon

position:1491063:-1
position: 1491063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491148:-1
position: 1491148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1488778-1490435:-1:exon

position:1490435:-1
position: 1490435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1-like G exchanging factor-like protein
translation: MALLSVPLRRPWPLRAALGPWRGLSEAAGRRRSARELQEAEAGAPVYRYAGQQPKRRGRVFVWGFCFSGALGLPSFVAPDAGMRPRRVQPVPCRLETEEKISSAACGYGFTLLSSRTTDVTKVWGMGLNKDSQIGFHQSRRERTKGYEYVLKPSPVPLPLDKPQQTRVSQVSCGRAHSLVLTDTEGVFSMGNNSYGQCGRKVIEGEVYSDSQIINRLQEFEDRVVQVACGQDHSLFRTERGDVYSCGWGADGQTGLGHYNIVSTPTKLRGDIAGVRISQVATYGDCCLAVSEDGELFGWGNSEYLQLASVTESTQVNVPRHLPFKVGRVKEAACGGTVNALLNEEGHVFVWGYGILGKGPKLMETAVPEMIPPSLFGLSDFNPDVCVARIRCGLGQFAAVTNRGELFVWGKNVRGCLGIGRMEDQYFPWRVTLPGEVTDVACGVDHMVTLVKSFI
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(1490358..1490435,1491063..1491148,1492869..1493042,1493703..1493787,1494322..1494503,1495904..1495988,1496922..1496973,1497474..1497540,1499480..1499608,1500921..1501050,1501506..1501805))
location: region:1490358-1501805:-1
so has part: feature:1501506-1501805:-1:exon
so has part: feature:1500921-1501050:-1:exon
so has part: feature:1499480-1499608:-1:exon
so has part: feature:1497474-1497540:-1:exon
so has part: feature:1496922-1496973:-1:exon
so has part: feature:1495904-1495988:-1:exon
so has part: feature:1494322-1494503:-1:exon
so has part: feature:1493703-1493787:-1:exon
so has part: feature:1492869-1493042:-1:exon
so has part: feature:1491063-1491148:-1:exon
so has part: feature:1490358-1490435:-1:exon

XP_042298457.1
type: Protein
SIO_000068: ncbiprotein

position:1490358:-1
position: 1490358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501805:-1
position: 1501805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501506-1501805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1500921-1501050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499480-1499608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1497474-1497540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496922-1496973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1495904-1495988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494322-1494503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1493703-1493787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1492869-1493042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1491063-1491148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1490358-1490435:-1:exon

RCC1L
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8520
gene: RCC1L
product: RCC1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_006100931.1
SIO_010081: RCC1L
so part of: RCC1L
location: complement(join(1491063..1491148,1492869..1493042,1493703..1493787,1494322..1494503,1495792..1495988,1496922..1496973,1497474..1497540,1499480..1499608,1500921..1501050,1501506..1501880))
location: region:1491063-1501880:-1
so has part: feature:1501506-1501880:-1:exon
so has part: feature:1500921-1501050:-1:exon
so has part: feature:1499480-1499608:-1:exon
so has part: feature:1497474-1497540:-1:exon
so has part: feature:1496922-1496973:-1:exon
so has part: feature:1495792-1495988:-1:exon
so has part: feature:1494322-1494503:-1:exon
so has part: feature:1493703-1493787:-1:exon
so has part: feature:1492869-1493042:-1:exon
so has part: feature:1491063-1491148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1501506-1501880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1500921-1501050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499480-1499608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1497474-1497540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496922-1496973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1495792-1495988:-1:exon

position:1495792:-1
position: 1495792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1494322-1494503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1493703-1493787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1492869-1493042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1491063-1491148:-1:exon

NCF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1503847..1520442)
location: region:1503847-1520442:-1
so has part: feature:1503847-1520442:-1:exon
subclass of: SO_0000010

121916969
type: Gene
SIO_000068: ncbigene

position:1503847:-1
position: 1503847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520442:-1
position: 1520442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503847-1520442:-1:exon

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: NCF1
product: neutrophil cytosolic factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442562.1
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(1503847..1504509,1505116..1505258,1505496..1505603,1507436..1507553,1507897..1508004,1509645..1509767,1510518..1510573,1512079..1512244,1512859..1512936,1514292..1514371,1515768..1515790,1520418..1520442))
location: region:1503847-1520442:-1
so has part: feature:1520418-1520442:-1:exon
so has part: feature:1515768-1515790:-1:exon
so has part: feature:1514292-1514371:-1:exon
so has part: feature:1512859-1512936:-1:exon
so has part: feature:1512079-1512244:-1:exon
so has part: feature:1510518-1510573:-1:exon
so has part: feature:1509645-1509767:-1:exon
so has part: feature:1507897-1508004:-1:exon
so has part: feature:1507436-1507553:-1:exon
so has part: feature:1505496-1505603:-1:exon
so has part: feature:1505116-1505258:-1:exon
so has part: feature:1503847-1504509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1520418-1520442:-1:exon

position:1520418:-1
position: 1520418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1515768-1515790:-1:exon

position:1515768:-1
position: 1515768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515790:-1
position: 1515790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1514292-1514371:-1:exon

position:1514292:-1
position: 1514292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514371:-1
position: 1514371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1512859-1512936:-1:exon

position:1512859:-1
position: 1512859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512936:-1
position: 1512936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1512079-1512244:-1:exon

position:1512079:-1
position: 1512079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512244:-1
position: 1512244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1510518-1510573:-1:exon

position:1510518:-1
position: 1510518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510573:-1
position: 1510573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1509645-1509767:-1:exon

position:1509645:-1
position: 1509645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509767:-1
position: 1509767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1507897-1508004:-1:exon

position:1507897:-1
position: 1507897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508004:-1
position: 1508004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1507436-1507553:-1:exon

position:1507436:-1
position: 1507436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507553:-1
position: 1507553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1505496-1505603:-1:exon

position:1505496:-1
position: 1505496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505603:-1
position: 1505603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1505116-1505258:-1:exon

position:1505116:-1
position: 1505116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505258:-1
position: 1505258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1503847-1504509:-1:exon

position:1504509:-1
position: 1504509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: NCF1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neutrophil cytosol factor 1
translation: MSASLAQKTVFPSQHYVYMFLVKWHDLKEKVGDRKFTEXIEFHKTLKEMXPIESGDINVENRIIPHCQVTPRWFDNQRSTQNRQNTLSEYSSALINLPRKISRCEHVLNFFRVKPDDLNPPTAGHIKKPETYLMPKDSKKIAEDITGPIILQTYRAIADYEKSSSTEMGVKMGDAVDVVEKSESGWWFCQQRNKRGWVPAAYLEPMDGPDESEEQEPNYAGELHTVRKGYMAAQEDEITLKEGETIEVIHKLLDGWWVVRKDEATGYYPSMYLQKAGEEKSPDNNQLKNKVAPPRRSTIRNIKSIHNQNRKQISQETYRRNSVKYVQSRKKLRSNLLNKGSAIVEKEETEGNQAKAQPAIPPRPSKDLILTRCSESTKSKIK
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(1504391..1504509,1505116..1505258,1505496..1505603,1507436..1507553,1507897..1508004,1509645..1509767,1510518..1510573,1512079..1512244,1512859..1512936,1514292..1514371,1515768..1515790,1520418..1520442))
location: region:1504391-1520442:-1
so has part: feature:1520418-1520442:-1:exon
so has part: feature:1515768-1515790:-1:exon
so has part: feature:1514292-1514371:-1:exon
so has part: feature:1512859-1512936:-1:exon
so has part: feature:1512079-1512244:-1:exon
so has part: feature:1510518-1510573:-1:exon
so has part: feature:1509645-1509767:-1:exon
so has part: feature:1507897-1508004:-1:exon
so has part: feature:1507436-1507553:-1:exon
so has part: feature:1505496-1505603:-1:exon
so has part: feature:1505116-1505258:-1:exon
so has part: feature:1504391-1504509:-1:exon

XP_042298496.1
type: Protein
SIO_000068: ncbiprotein

position:1504391:-1
position: 1504391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1520418-1520442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515768-1515790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1514292-1514371:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1512859-1512936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1512079-1512244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1510518-1510573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1509645-1509767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1507897-1508004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1507436-1507553:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1505496-1505603:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1505116-1505258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1504391-1504509:-1:exon

GTF2I
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1525609..1585398)
location: region:1525609-1585398:-1
so has part: feature:1525609-1585398:-1:exon
subclass of: SO_0000010

121916872
type: Gene
SIO_000068: ncbigene

position:1525609:-1
position: 1525609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585398:-1
position: 1585398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525609-1585398:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: GTF2I
product: general transcription factor IIi
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_042442397.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(1525609..1526208,1526573..1526648,1526974..1527018,1527651..1527737,1528011..1528039,1529055..1529239,1529952..1530032,1532073..1532183,1532779..1532837,1535609..1535792,1537406..1537471,1539539..1539637,1539867..1539953,1541340..1541398,1541938..1542121,1543474..1543545,1550082..1550140,1550802..1550985,1552387..1552458,1554361..1554419,1555759..1555942,1557499..1557564,1559278..1559379,1562852..1562914,1572711..1572776,1573311..1573351,1574330..1574378,1574781..1574809,1575258..1575441,1576875..1577009,1578787..1578925,1580207..1580310,1582401..1582443,1585213..1585398))
location: region:1525609-1585398:-1
so has part: feature:1585213-1585398:-1:exon
so has part: feature:1582401-1582443:-1:exon
so has part: feature:1580207-1580310:-1:exon
so has part: feature:1578787-1578925:-1:exon
so has part: feature:1576875-1577009:-1:exon
so has part: feature:1575258-1575441:-1:exon
so has part: feature:1574781-1574809:-1:exon
so has part: feature:1574330-1574378:-1:exon
so has part: feature:1573311-1573351:-1:exon
so has part: feature:1572711-1572776:-1:exon
so has part: feature:1562852-1562914:-1:exon
so has part: feature:1559278-1559379:-1:exon
so has part: feature:1557499-1557564:-1:exon
so has part: feature:1555759-1555942:-1:exon
so has part: feature:1554361-1554419:-1:exon
so has part: feature:1552387-1552458:-1:exon
so has part: feature:1550802-1550985:-1:exon
so has part: feature:1550082-1550140:-1:exon
so has part: feature:1543474-1543545:-1:exon
so has part: feature:1541938-1542121:-1:exon
so has part: feature:1541340-1541398:-1:exon
so has part: feature:1539867-1539953:-1:exon
so has part: feature:1539539-1539637:-1:exon
so has part: feature:1537406-1537471:-1:exon
so has part: feature:1535609-1535792:-1:exon
so has part: feature:1532779-1532837:-1:exon
so has part: feature:1532073-1532183:-1:exon
so has part: feature:1529952-1530032:-1:exon
so has part: feature:1529055-1529239:-1:exon
so has part: feature:1528011-1528039:-1:exon
so has part: feature:1527651-1527737:-1:exon
so has part: feature:1526974-1527018:-1:exon
so has part: feature:1526573-1526648:-1:exon
so has part: feature:1525609-1526208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1585213-1585398:-1:exon

position:1585213:-1
position: 1585213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1582401-1582443:-1:exon

position:1582401:-1
position: 1582401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582443:-1
position: 1582443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1580207-1580310:-1:exon

position:1580207:-1
position: 1580207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580310:-1
position: 1580310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1578787-1578925:-1:exon

position:1578787:-1
position: 1578787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578925:-1
position: 1578925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1576875-1577009:-1:exon

position:1576875:-1
position: 1576875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577009:-1
position: 1577009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1575258-1575441:-1:exon

position:1575258:-1
position: 1575258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575441:-1
position: 1575441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1574781-1574809:-1:exon

position:1574781:-1
position: 1574781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574809:-1
position: 1574809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1574330-1574378:-1:exon

position:1574330:-1
position: 1574330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574378:-1
position: 1574378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1573311-1573351:-1:exon

position:1573311:-1
position: 1573311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573351:-1
position: 1573351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1572711-1572776:-1:exon

position:1572711:-1
position: 1572711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572776:-1
position: 1572776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1562852-1562914:-1:exon

position:1562852:-1
position: 1562852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562914:-1
position: 1562914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1559278-1559379:-1:exon

position:1559278:-1
position: 1559278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559379:-1
position: 1559379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1557499-1557564:-1:exon

position:1557499:-1
position: 1557499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557564:-1
position: 1557564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1555759-1555942:-1:exon

position:1555759:-1
position: 1555759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555942:-1
position: 1555942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1554361-1554419:-1:exon

position:1554361:-1
position: 1554361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554419:-1
position: 1554419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1552387-1552458:-1:exon

position:1552387:-1
position: 1552387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552458:-1
position: 1552458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1550802-1550985:-1:exon

position:1550802:-1
position: 1550802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550985:-1
position: 1550985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1550082-1550140:-1:exon

position:1550082:-1
position: 1550082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550140:-1
position: 1550140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1543474-1543545:-1:exon

position:1543474:-1
position: 1543474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543545:-1
position: 1543545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1541938-1542121:-1:exon

position:1541938:-1
position: 1541938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542121:-1
position: 1542121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1541340-1541398:-1:exon

position:1541340:-1
position: 1541340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541398:-1
position: 1541398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1539867-1539953:-1:exon

position:1539867:-1
position: 1539867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539953:-1
position: 1539953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1539539-1539637:-1:exon

position:1539539:-1
position: 1539539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539637:-1
position: 1539637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1537406-1537471:-1:exon

position:1537406:-1
position: 1537406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1537471:-1
position: 1537471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1535609-1535792:-1:exon

position:1535609:-1
position: 1535609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535792:-1
position: 1535792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1532779-1532837:-1:exon

position:1532779:-1
position: 1532779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532837:-1
position: 1532837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1532073-1532183:-1:exon

position:1532073:-1
position: 1532073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532183:-1
position: 1532183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1529952-1530032:-1:exon

position:1529952:-1
position: 1529952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530032:-1
position: 1530032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1529055-1529239:-1:exon

position:1529055:-1
position: 1529055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529239:-1
position: 1529239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1528011-1528039:-1:exon

position:1528011:-1
position: 1528011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528039:-1
position: 1528039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1527651-1527737:-1:exon

position:1527651:-1
position: 1527651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527737:-1
position: 1527737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1526974-1527018:-1:exon

position:1526974:-1
position: 1526974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527018:-1
position: 1527018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1526573-1526648:-1:exon

position:1526573:-1
position: 1526573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526648:-1
position: 1526648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1525609-1526208:-1:exon

position:1526208:-1
position: 1526208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: GTF2I
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: general transcription factor II-I
translation: MQRIAKMAQAAMAAASSHEEDSSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRAFVNTRKDFQKDFVKYCVNEEAKAAELQKIKSTPLDNRMTVDIVEMEVLRKSVEDYFCICYGKALGKSTVVPVPYDKIQRDPSAVVVHGLPEGLTFKHPTNYDVTTLKWILENKSGISFVIKRPFLEPKKHLGPRIMDSSHTITSSSGSSSIQVKTEPSEDSGLEMITVKEESEDPEYYQFNIPDSSQHATSETSEDPEVEVTIEDDDDYLPPHKKTKNTEVINDAANAGRRKAREFNFEKWNARITDLRKQVEELFERKYAEAINAKGPVSIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLPLDKPVAGVKEEWYARITKLRKMVDQLFCRKFAEALGSTEPKAVPYQKFEAHPTDLYVEGLPENIPFRSPSWYGIPRLEKILQVGNRIKFVIKKPDLLTVSPTEVTQPRTNMPVKEDWNVRITKLRKQVEEIFNLKFGQALGLSEAVKVPYPVFESNPEHLYVEGLPEGIPFRSPTWFGIPRLERIVRGSGKIKFIVKKPDLVTSYLPPGLASKVNTSGSQSPNSSNSALSPVSNSKVPEIEVTVDEGLARKTPTPEVRANPQTNGSNVGFKPRGREFSFEAWNAKITDLKLKVENLFNEKCGEALGMTEPVKVPFALFESYPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFEAAVKESTTAIPTPPRRSSLSNTMINTVSMPDPIVNTASGVEDLNIIQVTIPDDDERTSKVEKARQLREQVNDLFSRKFGEAIGMGYPVKVPYRKITVNPGCVVVDGMPPGVSFKAPSYLEISSMRKILDSAEFIKFTVIRPFPGLVMNNQIPEKTEPEPPAAVAAAAAAAPEPEPVVQEPVEPDQIVQVSVEEDSVQTEDSAQIKQEPESTW
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(1526590..1526648,1526974..1527018,1527651..1527737,1528011..1528039,1529055..1529239,1529952..1530032,1532073..1532183,1532779..1532837,1535609..1535792,1537406..1537471,1539539..1539637,1539867..1539953,1541340..1541398,1541938..1542121,1543474..1543545,1550082..1550140,1550802..1550985,1552387..1552458,1554361..1554419,1555759..1555942,1557499..1557564,1559278..1559379,1562852..1562914,1572711..1572776,1573311..1573351,1574330..1574378,1574781..1574809,1575258..1575441,1576875..1577009,1578787..1578925,1580207..1580310,1582401..1582413))
location: region:1526590-1582413:-1
so has part: feature:1582401-1582413:-1:exon
so has part: feature:1580207-1580310:-1:exon
so has part: feature:1578787-1578925:-1:exon
so has part: feature:1576875-1577009:-1:exon
so has part: feature:1575258-1575441:-1:exon
so has part: feature:1574781-1574809:-1:exon
so has part: feature:1574330-1574378:-1:exon
so has part: feature:1573311-1573351:-1:exon
so has part: feature:1572711-1572776:-1:exon
so has part: feature:1562852-1562914:-1:exon
so has part: feature:1559278-1559379:-1:exon
so has part: feature:1557499-1557564:-1:exon
so has part: feature:1555759-1555942:-1:exon
so has part: feature:1554361-1554419:-1:exon
so has part: feature:1552387-1552458:-1:exon
so has part: feature:1550802-1550985:-1:exon
so has part: feature:1550082-1550140:-1:exon
so has part: feature:1543474-1543545:-1:exon
so has part: feature:1541938-1542121:-1:exon
so has part: feature:1541340-1541398:-1:exon
so has part: feature:1539867-1539953:-1:exon
so has part: feature:1539539-1539637:-1:exon
so has part: feature:1537406-1537471:-1:exon
so has part: feature:1535609-1535792:-1:exon
so has part: feature:1532779-1532837:-1:exon
so has part: feature:1532073-1532183:-1:exon
so has part: feature:1529952-1530032:-1:exon
so has part: feature:1529055-1529239:-1:exon
so has part: feature:1528011-1528039:-1:exon
so has part: feature:1527651-1527737:-1:exon
so has part: feature:1526974-1527018:-1:exon
so has part: feature:1526590-1526648:-1:exon

XP_042298331.1
type: Protein
SIO_000068: ncbiprotein

position:1526590:-1
position: 1526590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582413:-1
position: 1582413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582401-1582413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1580207-1580310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1578787-1578925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1576875-1577009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1575258-1575441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1574781-1574809:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1574330-1574378:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1573311-1573351:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572711-1572776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1562852-1562914:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1559278-1559379:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1557499-1557564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1555759-1555942:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1554361-1554419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1552387-1552458:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1550802-1550985:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1550082-1550140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1543474-1543545:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1541938-1542121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1541340-1541398:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1539867-1539953:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1539539-1539637:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1537406-1537471:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1535609-1535792:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1532779-1532837:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1532073-1532183:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1529952-1530032:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1529055-1529239:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1528011-1528039:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1527651-1527737:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1526974-1527018:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1526590-1526648:-1:exon

GTF2IRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1588757..1659971)
location: region:1588757-1659971:-1
so has part: feature:1588757-1659971:-1:exon
subclass of: SO_0000010

121916970
type: Gene
SIO_000068: ncbigene

position:1588757:-1
position: 1588757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659971:-1
position: 1659971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588757-1659971:-1:exon

GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: GTF2IRD1
product: GTF2I repeat domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442563.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(1588757..1589031,1590087..1590223,1590487..1590524,1592485..1592677,1593076..1593153,1601292..1601320,1602923..1603106,1603456..1603539,1605419..1605481,1605916..1605974,1607747..1607930,1616620..1616687,1617262..1617310,1617944..1618065,1618100..1618169,1620763..1620843,1621726..1621763,1622509..1622629,1624453..1624478,1625620..1625803,1627644..1627727,1629167..1629256,1631366..1631676,1633357..1633540,1635185..1635331,1640305..1640446,1644427..1644555,1645521..1645587,1659824..1659971))
location: region:1588757-1659971:-1
so has part: feature:1659824-1659971:-1:exon
so has part: feature:1645521-1645587:-1:exon
so has part: feature:1644427-1644555:-1:exon
so has part: feature:1640305-1640446:-1:exon
so has part: feature:1635185-1635331:-1:exon
so has part: feature:1633357-1633540:-1:exon
so has part: feature:1631366-1631676:-1:exon
so has part: feature:1629167-1629256:-1:exon
so has part: feature:1627644-1627727:-1:exon
so has part: feature:1625620-1625803:-1:exon
so has part: feature:1624453-1624478:-1:exon
so has part: feature:1622509-1622629:-1:exon
so has part: feature:1621726-1621763:-1:exon
so has part: feature:1620763-1620843:-1:exon
so has part: feature:1618100-1618169:-1:exon
so has part: feature:1617944-1618065:-1:exon
so has part: feature:1617262-1617310:-1:exon
so has part: feature:1616620-1616687:-1:exon
so has part: feature:1607747-1607930:-1:exon
so has part: feature:1605916-1605974:-1:exon
so has part: feature:1605419-1605481:-1:exon
so has part: feature:1603456-1603539:-1:exon
so has part: feature:1602923-1603106:-1:exon
so has part: feature:1601292-1601320:-1:exon
so has part: feature:1593076-1593153:-1:exon
so has part: feature:1592485-1592677:-1:exon
so has part: feature:1590487-1590524:-1:exon
so has part: feature:1590087-1590223:-1:exon
so has part: feature:1588757-1589031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1659824-1659971:-1:exon

position:1659824:-1
position: 1659824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1645521-1645587:-1:exon

position:1645521:-1
position: 1645521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1645587:-1
position: 1645587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1644427-1644555:-1:exon

position:1644427:-1
position: 1644427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644555:-1
position: 1644555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1640305-1640446:-1:exon

position:1640305:-1
position: 1640305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1640446:-1
position: 1640446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1635185-1635331:-1:exon

position:1635185:-1
position: 1635185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635331:-1
position: 1635331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1633357-1633540:-1:exon

position:1633357:-1
position: 1633357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1633540:-1
position: 1633540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1631366-1631676:-1:exon

position:1631366:-1
position: 1631366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1631676:-1
position: 1631676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1629167-1629256:-1:exon

position:1629167:-1
position: 1629167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629256:-1
position: 1629256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1627644-1627727:-1:exon

position:1627644:-1
position: 1627644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627727:-1
position: 1627727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1625620-1625803:-1:exon

position:1625620:-1
position: 1625620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625803:-1
position: 1625803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1624453-1624478:-1:exon

position:1624453:-1
position: 1624453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1624478:-1
position: 1624478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1622509-1622629:-1:exon

position:1622509:-1
position: 1622509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622629:-1
position: 1622629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1621726-1621763:-1:exon

position:1621726:-1
position: 1621726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621763:-1
position: 1621763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1620763-1620843:-1:exon

position:1620763:-1
position: 1620763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620843:-1
position: 1620843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1618100-1618169:-1:exon

position:1618100:-1
position: 1618100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618169:-1
position: 1618169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1617944-1618065:-1:exon

position:1617944:-1
position: 1617944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618065:-1
position: 1618065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1617262-1617310:-1:exon

position:1617262:-1
position: 1617262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617310:-1
position: 1617310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1616620-1616687:-1:exon

position:1616620:-1
position: 1616620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616687:-1
position: 1616687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1607747-1607930:-1:exon

position:1607747:-1
position: 1607747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607930:-1
position: 1607930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1605916-1605974:-1:exon

position:1605916:-1
position: 1605916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605974:-1
position: 1605974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1605419-1605481:-1:exon

position:1605419:-1
position: 1605419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605481:-1
position: 1605481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1603456-1603539:-1:exon

position:1603456:-1
position: 1603456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603539:-1
position: 1603539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1602923-1603106:-1:exon

position:1602923:-1
position: 1602923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603106:-1
position: 1603106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1601292-1601320:-1:exon

position:1601292:-1
position: 1601292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601320:-1
position: 1601320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1593076-1593153:-1:exon

position:1593076:-1
position: 1593076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593153:-1
position: 1593153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1592485-1592677:-1:exon

position:1592485:-1
position: 1592485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592677:-1
position: 1592677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1590487-1590524:-1:exon

position:1590487:-1
position: 1590487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590524:-1
position: 1590524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1590087-1590223:-1:exon

position:1590087:-1
position: 1590087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590223:-1
position: 1590223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1588757-1589031:-1:exon

position:1589031:-1
position: 1589031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1
translation: MALLGKPSDGPPNNSRPDQWHLVFSQKDEVITSLISALDSMCSALSKLNAEVACIAVHDENTFVVGTEKGRLFMNARKEVQADFKKFCRIQQRKEQDLDSQRKIKDFGRTIPRISPDQGSDVYLLRKMVEEVFDVLYSEALGKSSVVPLPYEKFLKEPGLLAVAGLPDGLTFRKPTEYDVKSLMAILEHSHHMRFRLKRPPEDSVREPNLTSELNSPTLMSKGSREPGLNNVHAKLANQDALSGVTANSFLYGVPLPTQIAMEIKQEGPSGRHGMSAVSEMLRSRSSGEAKVPSPQEFGDCCGQKSSLPGGPLIQNVHSSKRILFSIVHDKSDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHHIHFVIKRMFDERIFTGSKFTKDSTKIEPSSPSGEISPEPHRMAFLDLAGTSQTNHRSEKCTVAGDSEPGTSGELGGIKRIKIEPDEVDIIQITVPDRSPRSDEMRDAVANHVNLDVRDRLAGDWSLLRGLVLSNATSAQLRETLGWTGLSLLHLRESQHKKDQQKPANGENQVDNKDGIGDVLSQLRKQVEILFNARYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPDGILLRRPNCFGIAKLKKILQASSSIRFVIKRPELLAEGVKETASDSSGVTVHERDSSERLVEEPVKRPGFQENYDTRLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDDDDANRLGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPEAIEVTGLPDDIPFRNPNTYDIHRLEKILKARDHIQMVVTNQLQPFADLGAEAKQPENDSTVPKRKRKRISEGNSISSSSSSSSSSSSNLESTSSANQISLVQWPMYMLDYGSLNVQIPGPMNY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(1588963..1589031,1590087..1590223,1590487..1590524,1592485..1592677,1593076..1593153,1601292..1601320,1602923..1603106,1603456..1603539,1605419..1605481,1605916..1605974,1607747..1607930,1616620..1616687,1617262..1617310,1617944..1618065,1618100..1618169,1620763..1620843,1621726..1621763,1622509..1622629,1624453..1624478,1625620..1625803,1627644..1627727,1629167..1629256,1631366..1631676,1633357..1633540,1635185..1635331,1640305..1640446,1644427..1644549))
location: region:1588963-1644549:-1
so has part: feature:1644427-1644549:-1:exon
so has part: feature:1640305-1640446:-1:exon
so has part: feature:1635185-1635331:-1:exon
so has part: feature:1633357-1633540:-1:exon
so has part: feature:1631366-1631676:-1:exon
so has part: feature:1629167-1629256:-1:exon
so has part: feature:1627644-1627727:-1:exon
so has part: feature:1625620-1625803:-1:exon
so has part: feature:1624453-1624478:-1:exon
so has part: feature:1622509-1622629:-1:exon
so has part: feature:1621726-1621763:-1:exon
so has part: feature:1620763-1620843:-1:exon
so has part: feature:1618100-1618169:-1:exon
so has part: feature:1617944-1618065:-1:exon
so has part: feature:1617262-1617310:-1:exon
so has part: feature:1616620-1616687:-1:exon
so has part: feature:1607747-1607930:-1:exon
so has part: feature:1605916-1605974:-1:exon
so has part: feature:1605419-1605481:-1:exon
so has part: feature:1603456-1603539:-1:exon
so has part: feature:1602923-1603106:-1:exon
so has part: feature:1601292-1601320:-1:exon
so has part: feature:1593076-1593153:-1:exon
so has part: feature:1592485-1592677:-1:exon
so has part: feature:1590487-1590524:-1:exon
so has part: feature:1590087-1590223:-1:exon
so has part: feature:1588963-1589031:-1:exon

XP_042298497.1
type: Protein
SIO_000068: ncbiprotein

position:1588963:-1
position: 1588963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644549:-1
position: 1644549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1644427-1644549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640305-1640446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1635185-1635331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1633357-1633540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1631366-1631676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1629167-1629256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1627644-1627727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1625620-1625803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1624453-1624478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1622509-1622629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1621726-1621763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620763-1620843:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1618100-1618169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1617944-1618065:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1617262-1617310:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1616620-1616687:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1607747-1607930:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1605916-1605974:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1605419-1605481:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1603456-1603539:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1602923-1603106:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1601292-1601320:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1593076-1593153:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1592485-1592677:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1590487-1590524:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1590087-1590223:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1588963-1589031:-1:exon

LOC121916973
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1706664..1775008)
location: region:1706664-1775008:-1
so has part: feature:1706664-1775008:-1:exon
subclass of: SO_0000010

121916973
type: Gene
SIO_000068: ncbigene

position:1706664:-1
position: 1706664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1775008:-1
position: 1775008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1706664-1775008:-1:exon

LOC121916973
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916973
product: CAP-Gly domain-containing linker protein 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442565.1
SIO_010081: LOC121916973
subclass of: SO_0000673
so part of: LOC121916973
location: complement(join(1706664..1707718,1709055..1709117,1709939..1710124,1710777..1710936,1712304..1712539,1712664..1712671,1717521..1717760,1722366..1722470,1724495..1724555,1724786..1724889,1727157..1727354,1728400..1728613,1732930..1733054,1736870..1737414,1747391..1747622,1750984..1751155,1774589..1775008))
location: region:1706664-1775008:-1
so has part: feature:1774589-1775008:-1:exon
so has part: feature:1750984-1751155:-1:exon
so has part: feature:1747391-1747622:-1:exon
so has part: feature:1736870-1737414:-1:exon
so has part: feature:1732930-1733054:-1:exon
so has part: feature:1728400-1728613:-1:exon
so has part: feature:1727157-1727354:-1:exon
so has part: feature:1724786-1724889:-1:exon
so has part: feature:1724495-1724555:-1:exon
so has part: feature:1722366-1722470:-1:exon
so has part: feature:1717521-1717760:-1:exon
so has part: feature:1712664-1712671:-1:exon
so has part: feature:1712304-1712539:-1:exon
so has part: feature:1710777-1710936:-1:exon
so has part: feature:1709939-1710124:-1:exon
so has part: feature:1709055-1709117:-1:exon
so has part: feature:1706664-1707718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1774589-1775008:-1:exon

position:1774589:-1
position: 1774589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1750984-1751155:-1:exon

position:1750984:-1
position: 1750984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751155:-1
position: 1751155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1747391-1747622:-1:exon

position:1747391:-1
position: 1747391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747622:-1
position: 1747622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1736870-1737414:-1:exon

position:1736870:-1
position: 1736870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737414:-1
position: 1737414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1732930-1733054:-1:exon

position:1732930:-1
position: 1732930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733054:-1
position: 1733054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1728400-1728613:-1:exon

position:1728400:-1
position: 1728400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728613:-1
position: 1728613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1727157-1727354:-1:exon

position:1727157:-1
position: 1727157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727354:-1
position: 1727354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1724786-1724889:-1:exon

position:1724786:-1
position: 1724786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724889:-1
position: 1724889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1724495-1724555:-1:exon

position:1724495:-1
position: 1724495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724555:-1
position: 1724555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1722366-1722470:-1:exon

position:1722366:-1
position: 1722366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722470:-1
position: 1722470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1717521-1717760:-1:exon

position:1717521:-1
position: 1717521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717760:-1
position: 1717760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1712664-1712671:-1:exon

position:1712664:-1
position: 1712664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712671:-1
position: 1712671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1712304-1712539:-1:exon

position:1712304:-1
position: 1712304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712539:-1
position: 1712539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1710777-1710936:-1:exon

position:1710777:-1
position: 1710777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710936:-1
position: 1710936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1709939-1710124:-1:exon

position:1709939:-1
position: 1709939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710124:-1
position: 1710124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1709055-1709117:-1:exon

position:1709055:-1
position: 1709055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709117:-1
position: 1709117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1706664-1707718:-1:exon

position:1707718:-1
position: 1707718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916973
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916973
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: CAP-Gly domain-containing linker protein 2-like
translation: MLKPSGLKIPGRAGKHSSPVPRPGGTTTTATTTATATKEGSPLHKQGSTSSAATAEKPPGSKVAEVGDDFLGDFVVGERVWVNGVKPGVIQYLGETQFAPGQWAGVVLDDPVGKNDGSVGGVRYFECQPLQGIFTRPSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTSTPPLSTRVIPLRESVLNSTMKTGNESGSNLSDSGSVKKGDKDFRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKSKRMAMGVSALTHSPSSSSISSVSSVASSVGGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSRICEVEKEIAILKAQHEQYITEAEGNLQRARTVLEGAQKEKMELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTQLEHARIRELEQSLLVEKTQAEKLLKELEDTRLTTVAEKSRIXQLEEELSLTEQEWRDLRQCLKASNQPVPDHTLACKPKPSVCGIGCSANKEHQQESIQLKEKHKRTLKNIIFQSSFGEQNLALSSLCVCVFCSSPFCLPALENRCRSTERKADSLLKEKKRLEAELETVSRKTHDASGQLVLISQELLKKERNLNELRALLMEANRHSPGPERDLSREVHKAEWRQKEQKLKDDIKGLREKLIVLDKEKGVTDQRRYSLIDPSSESEVLRLQHRLVSTEDVLRNALEQGQQMEKLMEAMRTCSEKAQTIGNSGSANGIHQQDKSHKQEEKH
SIO_010081: LOC121916973
subclass of: SO_0000673
so part of: LOC121916973
location: complement(join(1707707..1707718,1709055..1709117,1709939..1710124,1710777..1710936,1712304..1712539,1712664..1712671,1717521..1717760,1722366..1722470,1724495..1724555,1724786..1724889,1727157..1727354,1728400..1728613,1732930..1733054,1736870..1737414,1747391..1747508))
location: region:1707707-1747508:-1
so has part: feature:1747391-1747508:-1:exon
so has part: feature:1736870-1737414:-1:exon
so has part: feature:1732930-1733054:-1:exon
so has part: feature:1728400-1728613:-1:exon
so has part: feature:1727157-1727354:-1:exon
so has part: feature:1724786-1724889:-1:exon
so has part: feature:1724495-1724555:-1:exon
so has part: feature:1722366-1722470:-1:exon
so has part: feature:1717521-1717760:-1:exon
so has part: feature:1712664-1712671:-1:exon
so has part: feature:1712304-1712539:-1:exon
so has part: feature:1710777-1710936:-1:exon
so has part: feature:1709939-1710124:-1:exon
so has part: feature:1709055-1709117:-1:exon
so has part: feature:1707707-1707718:-1:exon

XP_042298499.1
type: Protein
SIO_000068: ncbiprotein

position:1707707:-1
position: 1707707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747508:-1
position: 1747508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1747391-1747508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1736870-1737414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1732930-1733054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1728400-1728613:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727157-1727354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1724786-1724889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1724495-1724555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1722366-1722470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1717521-1717760:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1712664-1712671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1712304-1712539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1710777-1710936:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1709939-1710124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1709055-1709117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1707707-1707718:-1:exon

RFC2
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: RFC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1783342..1799238
location: region:1783342-1799238:1
so has part: feature:1783342-1799238:1:exon
subclass of: SO_0000010

121917135
type: Gene
SIO_000068: ncbigene

position:1783342:1
position: 1783342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799238:1
position: 1799238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1783342-1799238:1:exon

RFC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: RFC2
product: replication factor C subunit 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442855.1
SIO_010081: RFC2
subclass of: SO_0000673
so part of: RFC2
location: join(1783342..1783507,1785707..1785776,1787915..1787956,1788646..1788752,1789590..1789691,1790840..1790940,1792463..1792620,1794934..1794999,1797062..1797142,1797552..1797665,1798968..1799238)
location: region:1783342-1799238:1
so has part: feature:1783342-1783507:1:exon
so has part: feature:1785707-1785776:1:exon
so has part: feature:1787915-1787956:1:exon
so has part: feature:1788646-1788752:1:exon
so has part: feature:1789590-1789691:1:exon
so has part: feature:1790840-1790940:1:exon
so has part: feature:1792463-1792620:1:exon
so has part: feature:1794934-1794999:1:exon
so has part: feature:1797062-1797142:1:exon
so has part: feature:1797552-1797665:1:exon
so has part: feature:1798968-1799238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1783342-1783507:1:exon

position:1783507:1
position: 1783507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1785707-1785776:1:exon

position:1785707:1
position: 1785707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785776:1
position: 1785776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1787915-1787956:1:exon

position:1787915:1
position: 1787915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787956:1
position: 1787956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1788646-1788752:1:exon

position:1788646:1
position: 1788646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788752:1
position: 1788752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1789590-1789691:1:exon

position:1789590:1
position: 1789590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1789691:1
position: 1789691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1790840-1790940:1:exon

position:1790840:1
position: 1790840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790940:1
position: 1790940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1792463-1792620:1:exon

position:1792463:1
position: 1792463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792620:1
position: 1792620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1794934-1794999:1:exon

position:1794934:1
position: 1794934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794999:1
position: 1794999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1797062-1797142:1:exon

position:1797062:1
position: 1797062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797142:1
position: 1797142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1797552-1797665:1:exon

position:1797552:1
position: 1797552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797665:1
position: 1797665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1798968-1799238:1:exon

position:1798968:1
position: 1798968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RFC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: RFC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication factor C subunit 2
translation: MAAVAMEASGPEMSSQKEKAAAGPNGGHYELPWVEKYRPMKLSEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMKIVEKENVQYTDDGLEAIIFTAQGDMRQALNNLQSTHSGFGFVNSENVFKVCDEPHPLLVKEMLGHCVSANIDEAYKILAHLWKLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
SIO_010081: RFC2
subclass of: SO_0000673
so part of: RFC2
location: join(1783410..1783507,1785707..1785776,1787915..1787956,1788646..1788752,1789590..1789691,1790840..1790940,1792463..1792620,1794934..1794999,1797062..1797142,1797552..1797665,1798968..1799078)
location: region:1783410-1799078:1
so has part: feature:1783410-1783507:1:exon
so has part: feature:1785707-1785776:1:exon
so has part: feature:1787915-1787956:1:exon
so has part: feature:1788646-1788752:1:exon
so has part: feature:1789590-1789691:1:exon
so has part: feature:1790840-1790940:1:exon
so has part: feature:1792463-1792620:1:exon
so has part: feature:1794934-1794999:1:exon
so has part: feature:1797062-1797142:1:exon
so has part: feature:1797552-1797665:1:exon
so has part: feature:1798968-1799078:1:exon

XP_042298789.1
type: Protein
SIO_000068: ncbiprotein

position:1783410:1
position: 1783410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799078:1
position: 1799078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1783410-1783507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1785707-1785776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787915-1787956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1788646-1788752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789590-1789691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1790840-1790940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1792463-1792620:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1794934-1794999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1797062-1797142:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1797552-1797665:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1798968-1799078:1:exon

LOC121916776
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1800394..1817997)
location: region:1800394-1817997:-1
so has part: feature:1800394-1817997:-1:exon
subclass of: SO_0000010

121916776
type: Gene
SIO_000068: ncbigene

position:1800394:-1
position: 1800394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817997:-1
position: 1817997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1800394-1817997:-1:exon

LOC121916776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916776
product: linker for activation of T-cells family member 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_042442218.1
SIO_010081: LOC121916776
subclass of: SO_0000673
so part of: LOC121916776
location: complement(join(1800394..1800683,1801855..1801909,1802807..1802875,1803789..1803842,1805424..1805479,1805805..1805835,1806949..1806987,1808136..1808173,1808934..1808982,1811163..1811286,1813927..1814039,1817681..1817997))
location: region:1800394-1817997:-1
so has part: feature:1817681-1817997:-1:exon
so has part: feature:1813927-1814039:-1:exon
so has part: feature:1811163-1811286:-1:exon
so has part: feature:1808934-1808982:-1:exon
so has part: feature:1808136-1808173:-1:exon
so has part: feature:1806949-1806987:-1:exon
so has part: feature:1805805-1805835:-1:exon
so has part: feature:1805424-1805479:-1:exon
so has part: feature:1803789-1803842:-1:exon
so has part: feature:1802807-1802875:-1:exon
so has part: feature:1801855-1801909:-1:exon
so has part: feature:1800394-1800683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1817681-1817997:-1:exon

position:1817681:-1
position: 1817681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1813927-1814039:-1:exon

position:1813927:-1
position: 1813927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814039:-1
position: 1814039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1811163-1811286:-1:exon

position:1811163:-1
position: 1811163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1811286:-1
position: 1811286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1808934-1808982:-1:exon

position:1808934:-1
position: 1808934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808982:-1
position: 1808982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1808136-1808173:-1:exon

position:1808136:-1
position: 1808136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808173:-1
position: 1808173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1806949-1806987:-1:exon

position:1806949:-1
position: 1806949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806987:-1
position: 1806987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1805805-1805835:-1:exon

position:1805805:-1
position: 1805805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805835:-1
position: 1805835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1805424-1805479:-1:exon

position:1805424:-1
position: 1805424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805479:-1
position: 1805479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1803789-1803842:-1:exon

position:1803789:-1
position: 1803789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803842:-1
position: 1803842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1802807-1802875:-1:exon

position:1802807:-1
position: 1802807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1802875:-1
position: 1802875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1801855-1801909:-1:exon

position:1801855:-1
position: 1801855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801909:-1
position: 1801909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1800394-1800683:-1:exon

position:1800683:-1
position: 1800683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916776
product: linker for activation of T-cells family member 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_042442219.1
SIO_010081: LOC121916776
subclass of: SO_0000673
so part of: LOC121916776
location: complement(join(1800394..1800684,1801855..1801909,1802807..1802875,1803789..1803842,1805424..1805479,1805805..1805835,1806949..1806987,1808136..1808173,1808934..1808982,1811163..1811286,1813037..1813076,1813927..1814039,1817681..1817991))
location: region:1800394-1817991:-1
so has part: feature:1817681-1817991:-1:exon
so has part: feature:1813927-1814039:-1:exon
so has part: feature:1813037-1813076:-1:exon
so has part: feature:1811163-1811286:-1:exon
so has part: feature:1808934-1808982:-1:exon
so has part: feature:1808136-1808173:-1:exon
so has part: feature:1806949-1806987:-1:exon
so has part: feature:1805805-1805835:-1:exon
so has part: feature:1805424-1805479:-1:exon
so has part: feature:1803789-1803842:-1:exon
so has part: feature:1802807-1802875:-1:exon
so has part: feature:1801855-1801909:-1:exon
so has part: feature:1800394-1800684:-1:exon

position:1817991:-1
position: 1817991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1817681-1817991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813927-1814039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813037-1813076:-1:exon

position:1813037:-1
position: 1813037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813076:-1
position: 1813076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1811163-1811286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1808934-1808982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1808136-1808173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1806949-1806987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1805805-1805835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1805424-1805479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1803789-1803842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1802807-1802875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1801855-1801909:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1800394-1800684:-1:exon

position:1800684:-1
position: 1800684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916776
product: linker for activation of T-cells family member 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442217.1
SIO_010081: LOC121916776
subclass of: SO_0000673
so part of: LOC121916776
location: complement(join(1800394..1800683,1801855..1801909,1802807..1802875,1803789..1803842,1805424..1805479,1805805..1805835,1806949..1806987,1808136..1808173,1808934..1808982,1811163..1811286,1813037..1813076,1813927..1814083))
location: region:1800394-1814083:-1
so has part: feature:1813927-1814083:-1:exon
so has part: feature:1813037-1813076:-1:exon
so has part: feature:1811163-1811286:-1:exon
so has part: feature:1808934-1808982:-1:exon
so has part: feature:1808136-1808173:-1:exon
so has part: feature:1806949-1806987:-1:exon
so has part: feature:1805805-1805835:-1:exon
so has part: feature:1805424-1805479:-1:exon
so has part: feature:1803789-1803842:-1:exon
so has part: feature:1802807-1802875:-1:exon
so has part: feature:1801855-1801909:-1:exon
so has part: feature:1800394-1800683:-1:exon

position:1814083:-1
position: 1814083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813927-1814083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813037-1813076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811163-1811286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808934-1808982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1808136-1808173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1806949-1806987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1805805-1805835:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1805424-1805479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1803789-1803842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1802807-1802875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1801855-1801909:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1800394-1800683:-1:exon

LOC121916776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: linker for activation of T-cells family member 2-like isoform X1
translation: MSRQQHLKMPCNMPGPRKSHEDLSVASHLGACPKPRYQNFEKEMQMEQDPAYVEPIHANHHNYRKDLRTPSDEDFPYQNVAGPCGSNACVLVNADVYENSPIIQLWKNSQIAENLSSDDEPDYINANTNHSFLPENR
SIO_010081: LOC121916776
subclass of: SO_0000673
so part of: LOC121916776
location: complement(join(1800662..1800683,1801855..1801909,1802807..1802875,1803789..1803842,1805424..1805479,1805805..1805835,1806949..1806987,1808136..1808173,1808934..1808982,1811163))
location: region:1800662-1811163:-1
so has part: feature:1811163-1811163:-1:exon
so has part: feature:1808934-1808982:-1:exon
so has part: feature:1808136-1808173:-1:exon
so has part: feature:1806949-1806987:-1:exon
so has part: feature:1805805-1805835:-1:exon
so has part: feature:1805424-1805479:-1:exon
so has part: feature:1803789-1803842:-1:exon
so has part: feature:1802807-1802875:-1:exon
so has part: feature:1801855-1801909:-1:exon
so has part: feature:1800662-1800683:-1:exon

XP_042298151.1
type: Protein
SIO_000068: ncbiprotein

position:1800662:-1
position: 1800662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811163-1811163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1808934-1808982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808136-1808173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1806949-1806987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805805-1805835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805424-1805479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1803789-1803842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1802807-1802875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1801855-1801909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1800662-1800683:-1:exon

LOC121916776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: linker for activation of T-cells family member 2-like isoform X1
translation: MSRQQHLKMPCNMPGPRKSHEDLSVASHLGACPKPRYQNFEKEMQMEQDPAYVEPIHANHHNYRKDLRTPSDEDFPYQNVAGPCGSNACVLVNADVYENSPIIQLWKNSQIAENLSSDDEPDYINANTNHSFLPENR
SIO_010081: LOC121916776
subclass of: SO_0000673
so part of: LOC121916776
location: complement(join(1800662..1800683,1801855..1801909,1802807..1802875,1803789..1803842,1805424..1805479,1805805..1805835,1806949..1806987,1808136..1808173,1808934..1808982,1811163))
location: region:1800662-1811163:-1
so has part: feature:1811163-1811163:-1:exon
so has part: feature:1808934-1808982:-1:exon
so has part: feature:1808136-1808173:-1:exon
so has part: feature:1806949-1806987:-1:exon
so has part: feature:1805805-1805835:-1:exon
so has part: feature:1805424-1805479:-1:exon
so has part: feature:1803789-1803842:-1:exon
so has part: feature:1802807-1802875:-1:exon
so has part: feature:1801855-1801909:-1:exon
so has part: feature:1800662-1800683:-1:exon

XP_042298152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1811163-1811163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1808934-1808982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808136-1808173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1806949-1806987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805805-1805835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805424-1805479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1803789-1803842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1802807-1802875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1801855-1801909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1800662-1800683:-1:exon

LOC121916776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: linker for activation of T-cells family member 2-like isoform X2
translation: MSRQQHLKMPCNMPGPRKSHEDLSVASHLGACPKPRYQNFEKEMQMEQDPAYVEPIHANHHNYRKDLRTPSDEDFPYQNVAGPCGSNACVLVNADVYENSPIIQLWKNSQIAENLSSDDEPDYINANTNHRFPA
SIO_010081: LOC121916776
subclass of: SO_0000673
so part of: LOC121916776
location: complement(join(1800672..1800684,1801855..1801909,1802807..1802875,1803789..1803842,1805424..1805479,1805805..1805835,1806949..1806987,1808136..1808173,1808934..1808982,1811163))
location: region:1800672-1811163:-1
so has part: feature:1811163-1811163:-1:exon
so has part: feature:1808934-1808982:-1:exon
so has part: feature:1808136-1808173:-1:exon
so has part: feature:1806949-1806987:-1:exon
so has part: feature:1805805-1805835:-1:exon
so has part: feature:1805424-1805479:-1:exon
so has part: feature:1803789-1803842:-1:exon
so has part: feature:1802807-1802875:-1:exon
so has part: feature:1801855-1801909:-1:exon
so has part: feature:1800672-1800684:-1:exon

XP_042298153.1
type: Protein
SIO_000068: ncbiprotein

position:1800672:-1
position: 1800672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811163-1811163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1808934-1808982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808136-1808173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1806949-1806987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805805-1805835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805424-1805479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1803789-1803842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1802807-1802875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1801855-1801909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1800672-1800684:-1:exon

EIF4H
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: EIF4H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1819873..1834624)
location: region:1819873-1834624:-1
so has part: feature:1819873-1834624:-1:exon
subclass of: SO_0000010

121916954
type: Gene
SIO_000068: ncbigene

position:1819873:-1
position: 1819873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834624:-1
position: 1834624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819873-1834624:-1:exon

EIF4H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: EIF4H
product: eukaryotic translation initiation factor 4H, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442541.1
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(1819873..1821882,1823193..1823345,1825186..1825251,1827637..1827733,1827836..1827900,1830234..1830418,1834479..1834624))
location: region:1819873-1834624:-1
so has part: feature:1834479-1834624:-1:exon
so has part: feature:1830234-1830418:-1:exon
so has part: feature:1827836-1827900:-1:exon
so has part: feature:1827637-1827733:-1:exon
so has part: feature:1825186-1825251:-1:exon
so has part: feature:1823193-1823345:-1:exon
so has part: feature:1819873-1821882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1834479-1834624:-1:exon

position:1834479:-1
position: 1834479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1830234-1830418:-1:exon

position:1830234:-1
position: 1830234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830418:-1
position: 1830418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1827836-1827900:-1:exon

position:1827836:-1
position: 1827836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827900:-1
position: 1827900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1827637-1827733:-1:exon

position:1827637:-1
position: 1827637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827733:-1
position: 1827733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1825186-1825251:-1:exon

position:1825186:-1
position: 1825186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825251:-1
position: 1825251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1823193-1823345:-1:exon

position:1823193:-1
position: 1823193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823345:-1
position: 1823345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1819873-1821882:-1:exon

position:1821882:-1
position: 1821882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EIF4H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: EIF4H
product: eukaryotic translation initiation factor 4H, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442540.1
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(1819873..1821882,1823193..1823345,1825180..1825251,1827637..1827733,1827836..1827900,1830234..1830418,1834479..1834624))
location: region:1819873-1834624:-1
so has part: feature:1834479-1834624:-1:exon
so has part: feature:1830234-1830418:-1:exon
so has part: feature:1827836-1827900:-1:exon
so has part: feature:1827637-1827733:-1:exon
so has part: feature:1825180-1825251:-1:exon
so has part: feature:1823193-1823345:-1:exon
so has part: feature:1819873-1821882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1834479-1834624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1830234-1830418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827836-1827900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827637-1827733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825180-1825251:-1:exon

position:1825180:-1
position: 1825180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1823193-1823345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1819873-1821882:-1:exon

EIF4H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: EIF4H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X2
translation: MADFDAYDDRAYSSFGGGRGSRGGSGLGARKQKELPTEPPFTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDEVESLKEALTYDGALLGDRSLRVDIAEGRKQDKGGFGFRKGGPDDRGMGGGPREPRGGGWDSRDDFNSGGFRDDDFLGGRGRTRPGDRRGGGPPMGGTGRFRDGPPLRGSSMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGAKPREEVVKGEQE
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(1821743..1821882,1823193..1823345,1825186..1825251,1827637..1827733,1827836..1827900,1830234..1830418,1834479..1834537))
location: region:1821743-1834537:-1
so has part: feature:1834479-1834537:-1:exon
so has part: feature:1830234-1830418:-1:exon
so has part: feature:1827836-1827900:-1:exon
so has part: feature:1827637-1827733:-1:exon
so has part: feature:1825186-1825251:-1:exon
so has part: feature:1823193-1823345:-1:exon
so has part: feature:1821743-1821882:-1:exon

XP_042298475.1
type: Protein
SIO_000068: ncbiprotein

position:1821743:-1
position: 1821743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834537:-1
position: 1834537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834479-1834537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1830234-1830418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827836-1827900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827637-1827733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825186-1825251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1823193-1823345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1821743-1821882:-1:exon

EIF4H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: EIF4H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X1
translation: MADFDAYDDRAYSSFGGGRGSRGGSGLGARKQKELPTEPPFTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDEVESLKEALTYDGALLGDRSLRVDIAEGRKQDKGGFGFRKGGPDDRGMGGGPREPRGGGWDSRDDFNSGSGGFRDDDFLGGRGRTRPGDRRGGGPPMGGTGRFRDGPPLRGSSMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGAKPREEVVKGEQE
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(1821743..1821882,1823193..1823345,1825180..1825251,1827637..1827733,1827836..1827900,1830234..1830418,1834479..1834537))
location: region:1821743-1834537:-1
so has part: feature:1834479-1834537:-1:exon
so has part: feature:1830234-1830418:-1:exon
so has part: feature:1827836-1827900:-1:exon
so has part: feature:1827637-1827733:-1:exon
so has part: feature:1825180-1825251:-1:exon
so has part: feature:1823193-1823345:-1:exon
so has part: feature:1821743-1821882:-1:exon

XP_042298474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1834479-1834537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1830234-1830418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827836-1827900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827637-1827733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825180-1825251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1823193-1823345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1821743-1821882:-1:exon

MYBBP1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: MYBBP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1839360..1896165
location: region:1839360-1896165:1
so has part: feature:1839360-1896165:1:exon
subclass of: SO_0000010

121916946
type: Gene
SIO_000068: ncbigene

position:1839360:1
position: 1839360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896165:1
position: 1896165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839360-1896165:1:exon

MYBBP1A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8520
gene: MYBBP1A
product: MYB binding protein 1a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_006100932.1
SIO_010081: MYBBP1A
so part of: MYBBP1A
location: join(1839360..1839609,1840623..1840721,1843397..1843480,1843832..1843906,1844222..1844329,1846066..1846256,1847438..1847605,1848268..1848385,1849935..1850224,1851774..1851890,1852663..1852788,1853083..1853289,1855130..1855238,1856307..1856403,1857088..1857242,1859144..1859239,1859818..1859991,1861728..1861892,1862745..1862902,1863117..1863251,1863793..1863916,1864713..1864844,1865588..1865656,1876580..1876693,1890994..1891095,1891348..1891472,1893408..1893887,1894213..1894525,1894856..1896165)
location: region:1839360-1896165:1
so has part: feature:1839360-1839609:1:exon
so has part: feature:1840623-1840721:1:exon
so has part: feature:1843397-1843480:1:exon
so has part: feature:1843832-1843906:1:exon
so has part: feature:1844222-1844329:1:exon
so has part: feature:1846066-1846256:1:exon
so has part: feature:1847438-1847605:1:exon
so has part: feature:1848268-1848385:1:exon
so has part: feature:1849935-1850224:1:exon
so has part: feature:1851774-1851890:1:exon
so has part: feature:1852663-1852788:1:exon
so has part: feature:1853083-1853289:1:exon
so has part: feature:1855130-1855238:1:exon
so has part: feature:1856307-1856403:1:exon
so has part: feature:1857088-1857242:1:exon
so has part: feature:1859144-1859239:1:exon
so has part: feature:1859818-1859991:1:exon
so has part: feature:1861728-1861892:1:exon
so has part: feature:1862745-1862902:1:exon
so has part: feature:1863117-1863251:1:exon
so has part: feature:1863793-1863916:1:exon
so has part: feature:1864713-1864844:1:exon
so has part: feature:1865588-1865656:1:exon
so has part: feature:1876580-1876693:1:exon
so has part: feature:1890994-1891095:1:exon
so has part: feature:1891348-1891472:1:exon
so has part: feature:1893408-1893887:1:exon
so has part: feature:1894213-1894525:1:exon
so has part: feature:1894856-1896165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1839360-1839609:1:exon

position:1839609:1
position: 1839609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1840623-1840721:1:exon

position:1840623:1
position: 1840623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1840721:1
position: 1840721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1843397-1843480:1:exon

position:1843397:1
position: 1843397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843480:1
position: 1843480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1843832-1843906:1:exon

position:1843832:1
position: 1843832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843906:1
position: 1843906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1844222-1844329:1:exon

position:1844222:1
position: 1844222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844329:1
position: 1844329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1846066-1846256:1:exon

position:1846066:1
position: 1846066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846256:1
position: 1846256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1847438-1847605:1:exon

position:1847438:1
position: 1847438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847605:1
position: 1847605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1848268-1848385:1:exon

position:1848268:1
position: 1848268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848385:1
position: 1848385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1849935-1850224:1:exon

position:1849935:1
position: 1849935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850224:1
position: 1850224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1851774-1851890:1:exon

position:1851774:1
position: 1851774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1851890:1
position: 1851890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1852663-1852788:1:exon

position:1852663:1
position: 1852663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1852788:1
position: 1852788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1853083-1853289:1:exon

position:1853083:1
position: 1853083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1853289:1
position: 1853289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1855130-1855238:1:exon

position:1855130:1
position: 1855130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1855238:1
position: 1855238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1856307-1856403:1:exon

position:1856307:1
position: 1856307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1856403:1
position: 1856403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1857088-1857242:1:exon

position:1857088:1
position: 1857088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1857242:1
position: 1857242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1859144-1859239:1:exon

position:1859144:1
position: 1859144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859239:1
position: 1859239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1859818-1859991:1:exon

position:1859818:1
position: 1859818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859991:1
position: 1859991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1861728-1861892:1:exon

position:1861728:1
position: 1861728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861892:1
position: 1861892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1862745-1862902:1:exon

position:1862745:1
position: 1862745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862902:1
position: 1862902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1863117-1863251:1:exon

position:1863117:1
position: 1863117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863251:1
position: 1863251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1863793-1863916:1:exon

position:1863793:1
position: 1863793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863916:1
position: 1863916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1864713-1864844:1:exon

position:1864713:1
position: 1864713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864844:1
position: 1864844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1865588-1865656:1:exon

position:1865588:1
position: 1865588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865656:1
position: 1865656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1876580-1876693:1:exon

position:1876580:1
position: 1876580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876693:1
position: 1876693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1890994-1891095:1:exon

position:1890994:1
position: 1890994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891095:1
position: 1891095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1891348-1891472:1:exon

position:1891348:1
position: 1891348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891472:1
position: 1891472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1893408-1893887:1:exon

position:1893408:1
position: 1893408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893887:1
position: 1893887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1894213-1894525:1:exon

position:1894213:1
position: 1894213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1894525:1
position: 1894525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1894856-1896165:1:exon

position:1894856:1
position: 1894856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYBBP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: MYBBP1A
product: MYB binding protein 1a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442525.1
SIO_010081: MYBBP1A
subclass of: SO_0000673
so part of: MYBBP1A
location: join(1839360..1839609,1840623..1840721,1843397..1843480,1843832..1843906,1844222..1844329,1846066..1846256,1847438..1847605,1848268..1848385,1849935..1850224,1851774..1851890,1852663..1852788,1853083..1853289,1855130..1855238,1856307..1856403,1857088..1857242,1859144..1859239,1859818..1859991,1861728..1861892,1862745..1862902,1863117..1863251,1863793..1863916,1864713..1864844,1865588..1865656,1876580..1876693,1890994..1891095,1891348..1891472,1893408..1893916)
location: region:1839360-1893916:1
so has part: feature:1839360-1839609:1:exon
so has part: feature:1840623-1840721:1:exon
so has part: feature:1843397-1843480:1:exon
so has part: feature:1843832-1843906:1:exon
so has part: feature:1844222-1844329:1:exon
so has part: feature:1846066-1846256:1:exon
so has part: feature:1847438-1847605:1:exon
so has part: feature:1848268-1848385:1:exon
so has part: feature:1849935-1850224:1:exon
so has part: feature:1851774-1851890:1:exon
so has part: feature:1852663-1852788:1:exon
so has part: feature:1853083-1853289:1:exon
so has part: feature:1855130-1855238:1:exon
so has part: feature:1856307-1856403:1:exon
so has part: feature:1857088-1857242:1:exon
so has part: feature:1859144-1859239:1:exon
so has part: feature:1859818-1859991:1:exon
so has part: feature:1861728-1861892:1:exon
so has part: feature:1862745-1862902:1:exon
so has part: feature:1863117-1863251:1:exon
so has part: feature:1863793-1863916:1:exon
so has part: feature:1864713-1864844:1:exon
so has part: feature:1865588-1865656:1:exon
so has part: feature:1876580-1876693:1:exon
so has part: feature:1890994-1891095:1:exon
so has part: feature:1891348-1891472:1:exon
so has part: feature:1893408-1893916:1:exon

position:1893916:1
position: 1893916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839360-1839609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1840623-1840721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1843397-1843480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1843832-1843906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844222-1844329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1846066-1846256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1847438-1847605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1848268-1848385:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1849935-1850224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1851774-1851890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1852663-1852788:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1853083-1853289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1855130-1855238:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1856307-1856403:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1857088-1857242:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1859144-1859239:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1859818-1859991:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1861728-1861892:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1862745-1862902:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1863117-1863251:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1863793-1863916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1864713-1864844:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1865588-1865656:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1876580-1876693:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1890994-1891095:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1891348-1891472:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1893408-1893916:1:exon

MYBBP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: MYBBP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb-binding protein 1A
translation: MEGPPSSSRLLGQSRQFLDFFWDLAKPEQETRLEATEGLLGYLRENQKKDEDLLKYTLKRLVVGLGATREASRPAFSLALAQVLQAFEEIPLLTALEQIKEKYNLSKVKKKLFRNALFGNFFGVLALFQSGRLAKESKALLECVQVLQSLSEHHAHLKDLPRKTLADIVTEIPEAVFEEVLFSILEDDLTEAFSTPGQLYLLLVGIQRFPRVLRPEKLKVLLGTSAVVTEENIPRLVEVLKMAAKTERKDRVLPTVGLDLMKVSLKEGTFELFWEEAVEKGLLTDNTGPCSYMCYRLLGSAFPLLSLSQLKTILQGEVMRHYGIHVVSAKLPNRFKFAPEMEALVGSFLEGCSDPKKQLAVMIGFSTLTNHGYPVVPSFWKVVRHLLPDALLNYISWLKSMFLTPDLDSCVEFATKRQQQNEKKKNSELTEHCVTRLRKWLIARLVGIAENPQIKREEEFVADIARFCFFHAFFKTKKPTSKISETAAIPSVPLSAPSRTVTADSFFSLLQHLNTMPALGESVEAEEMRKKHLHGLTANGEPWIYLAVQYANTLLSDKKHVEAVAPFSEEEQFAWDRMLQTVEALRRREQKGLTLKTTAFQHLLLLVGIHLFKSPAECVNLLNDLQNCTKRAFEEKHKKKTSASASGEEEPEWVEVIVEVLLSLLAQSSALIRRVCKSVFALVCQHMTEAALQLILDVLDPQQDQDEESAVVVVEEAQKKMKKKPLPDESDDDSGKSSSDEDSSEDNDSESDDARMDAPETDSEAEGEADENFRAMLRNVLQAGNALGGDDSDEDVDDETMMSLDKNLSALFAEQQKRTQAKKDEKEKIRKEKILRREFKIKVLDLVEVFLTKQPENPLVFRVIEPLLSVIEQSMSSESNKQEQDYLRKTADIFTNSLCRSKQYCKNVAPIREELHNQLESLVKRACRQSDSTVALYCFSASLYLCRVLKGNVGSNEGAPVTAQPKKKQKSSEGSDAPAAQHLPVGCLDLERVTAVYKEALNLFLTKRKSPLTGSMFLDLFERHPIMCKPLIATVVKSITEGARQPQQAQACLLLQKALQTRDFKLSFSEQQWEELIRESVQQVTKTLKMVGQFKIKVDQEKAIKCLELLNCLIKMVTKQELPVQLTEVPIAMQVLGQQEGFGKSTRLTDLYWNVMKLLGFTRPAKEKASAQAKPPTETEPPLKRKKKGFLPATKIRKNRKKALPGHSQETGAKSSDVKETVVGAENATPAGKKKKRKNKKNRGEGGEEGQASESGPPAKKPSRPAVGAKEKETQNPKEKRRRRRNRKKGKKAGTQLAKDGPD
SIO_010081: MYBBP1A
subclass of: SO_0000673
so part of: MYBBP1A
location: join(1839463..1839609,1840623..1840721,1843397..1843480,1843832..1843906,1844222..1844329,1846066..1846256,1847438..1847605,1848268..1848385,1849935..1850224,1851774..1851890,1852663..1852788,1853083..1853289,1855130..1855238,1856307..1856403,1857088..1857242,1859144..1859239,1859818..1859991,1861728..1861892,1862745..1862902,1863117..1863251,1863793..1863916,1864713..1864844,1865588..1865656,1876580..1876693,1890994..1891095,1891348..1891472,1893408..1893834)
location: region:1839463-1893834:1
so has part: feature:1839463-1839609:1:exon
so has part: feature:1840623-1840721:1:exon
so has part: feature:1843397-1843480:1:exon
so has part: feature:1843832-1843906:1:exon
so has part: feature:1844222-1844329:1:exon
so has part: feature:1846066-1846256:1:exon
so has part: feature:1847438-1847605:1:exon
so has part: feature:1848268-1848385:1:exon
so has part: feature:1849935-1850224:1:exon
so has part: feature:1851774-1851890:1:exon
so has part: feature:1852663-1852788:1:exon
so has part: feature:1853083-1853289:1:exon
so has part: feature:1855130-1855238:1:exon
so has part: feature:1856307-1856403:1:exon
so has part: feature:1857088-1857242:1:exon
so has part: feature:1859144-1859239:1:exon
so has part: feature:1859818-1859991:1:exon
so has part: feature:1861728-1861892:1:exon
so has part: feature:1862745-1862902:1:exon
so has part: feature:1863117-1863251:1:exon
so has part: feature:1863793-1863916:1:exon
so has part: feature:1864713-1864844:1:exon
so has part: feature:1865588-1865656:1:exon
so has part: feature:1876580-1876693:1:exon
so has part: feature:1890994-1891095:1:exon
so has part: feature:1891348-1891472:1:exon
so has part: feature:1893408-1893834:1:exon

XP_042298459.1
type: Protein
SIO_000068: ncbiprotein

position:1839463:1
position: 1839463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893834:1
position: 1893834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839463-1839609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1840623-1840721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1843397-1843480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1843832-1843906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844222-1844329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1846066-1846256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1847438-1847605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1848268-1848385:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1849935-1850224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1851774-1851890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1852663-1852788:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1853083-1853289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1855130-1855238:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1856307-1856403:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1857088-1857242:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1859144-1859239:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1859818-1859991:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1861728-1861892:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1862745-1862902:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1863117-1863251:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1863793-1863916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1864713-1864844:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1865588-1865656:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1876580-1876693:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1890994-1891095:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1891348-1891472:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1893408-1893834:1:exon

SPNS2
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: SPNS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1894567..1967269)
location: region:1894567-1967269:-1
so has part: feature:1894567-1967269:-1:exon
subclass of: SO_0000010

121916947
type: Gene
SIO_000068: ncbigene

position:1894567:-1
position: 1894567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967269:-1
position: 1967269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1894567-1967269:-1:exon

SPNS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SPNS2
product: sphingolipid transporter 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442526.1
SIO_010081: SPNS2
subclass of: SO_0000673
so part of: SPNS2
location: complement(join(1894567..1897250,1897675..1897723,1906865..1906952,1909969..1910132,1912082..1912180,1916568..1916633,1917513..1917702,1919650..1919802,1920608..1920750,1925721..1925787,1928766..1928917,1949028..1949164,1967208..1967269))
location: region:1894567-1967269:-1
so has part: feature:1967208-1967269:-1:exon
so has part: feature:1949028-1949164:-1:exon
so has part: feature:1928766-1928917:-1:exon
so has part: feature:1925721-1925787:-1:exon
so has part: feature:1920608-1920750:-1:exon
so has part: feature:1919650-1919802:-1:exon
so has part: feature:1917513-1917702:-1:exon
so has part: feature:1916568-1916633:-1:exon
so has part: feature:1912082-1912180:-1:exon
so has part: feature:1909969-1910132:-1:exon
so has part: feature:1906865-1906952:-1:exon
so has part: feature:1897675-1897723:-1:exon
so has part: feature:1894567-1897250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1967208-1967269:-1:exon

position:1967208:-1
position: 1967208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1949028-1949164:-1:exon

position:1949028:-1
position: 1949028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949164:-1
position: 1949164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1928766-1928917:-1:exon

position:1928766:-1
position: 1928766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928917:-1
position: 1928917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1925721-1925787:-1:exon

position:1925721:-1
position: 1925721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925787:-1
position: 1925787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1920608-1920750:-1:exon

position:1920608:-1
position: 1920608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1920750:-1
position: 1920750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1919650-1919802:-1:exon

position:1919650:-1
position: 1919650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919802:-1
position: 1919802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1917513-1917702:-1:exon

position:1917513:-1
position: 1917513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1917702:-1
position: 1917702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1916568-1916633:-1:exon

position:1916568:-1
position: 1916568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916633:-1
position: 1916633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1912082-1912180:-1:exon

position:1912082:-1
position: 1912082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912180:-1
position: 1912180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1909969-1910132:-1:exon

position:1909969:-1
position: 1909969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910132:-1
position: 1910132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1906865-1906952:-1:exon

position:1906865:-1
position: 1906865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906952:-1
position: 1906952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1897675-1897723:-1:exon

position:1897675:-1
position: 1897675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897723:-1
position: 1897723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1894567-1897250:-1:exon

position:1897250:-1
position: 1897250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPNS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SPNS2
product: sphingolipid transporter 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442527.1
SIO_010081: SPNS2
subclass of: SO_0000673
so part of: SPNS2
location: complement(join(1894567..1897250,1897675..1897723,1909969..1910132,1912082..1912180,1916568..1916633,1917513..1917702,1919650..1919802,1920608..1920750,1925721..1925787,1928766..1928917,1949028..1949164,1962739..1962868))
location: region:1894567-1962868:-1
so has part: feature:1962739-1962868:-1:exon
so has part: feature:1949028-1949164:-1:exon
so has part: feature:1928766-1928917:-1:exon
so has part: feature:1925721-1925787:-1:exon
so has part: feature:1920608-1920750:-1:exon
so has part: feature:1919650-1919802:-1:exon
so has part: feature:1917513-1917702:-1:exon
so has part: feature:1916568-1916633:-1:exon
so has part: feature:1912082-1912180:-1:exon
so has part: feature:1909969-1910132:-1:exon
so has part: feature:1897675-1897723:-1:exon
so has part: feature:1894567-1897250:-1:exon

position:1962868:-1
position: 1962868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1962739-1962868:-1:exon

position:1962739:-1
position: 1962739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1949028-1949164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1928766-1928917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1925721-1925787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920608-1920750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1919650-1919802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1917513-1917702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1916568-1916633:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1912082-1912180:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1909969-1910132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1897675-1897723:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1894567-1897250:-1:exon

SPNS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SPNS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 2 isoform X1
translation: MVAAPIFGYLGDRFNRKIILSCGIFFWSAITFSSSFITQKYFWLFVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQVAGDWHWALRVSPLLGMITGTLILIFVPAAKRGNAEQLGAQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCTVQPCGTKDSLIFGAITCFTGFLGVITGAGATKWCRLKTQRADPLVCAVGMLGSAIFTCLIFVAAKSSIVGAYVCIFIGETLLFSNWAITADILMYVVIPTRRATAVALQSFTSHLLGDAGSPYLVGFISDVIRQSTKESVLWEFLSLGYALMLCPFVVVLGGMFFLATALFFLSDRAKAEQHDDSGTGEEGLHSGETPSAPSPTAIQKAEQGEPTYDASSLCESLSLADILGDEGNLL
SIO_010081: SPNS2
subclass of: SO_0000673
so part of: SPNS2
location: complement(join(1897216..1897250,1897675..1897723,1906865..1906952,1909969..1910132,1912082..1912180,1916568..1916633,1917513..1917702,1919650..1919802,1920608..1920750,1925721..1925787,1928766..1928917,1949028..1949147))
location: region:1897216-1949147:-1
so has part: feature:1949028-1949147:-1:exon
so has part: feature:1928766-1928917:-1:exon
so has part: feature:1925721-1925787:-1:exon
so has part: feature:1920608-1920750:-1:exon
so has part: feature:1919650-1919802:-1:exon
so has part: feature:1917513-1917702:-1:exon
so has part: feature:1916568-1916633:-1:exon
so has part: feature:1912082-1912180:-1:exon
so has part: feature:1909969-1910132:-1:exon
so has part: feature:1906865-1906952:-1:exon
so has part: feature:1897675-1897723:-1:exon
so has part: feature:1897216-1897250:-1:exon

XP_042298460.1
type: Protein
SIO_000068: ncbiprotein

position:1897216:-1
position: 1897216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949147:-1
position: 1949147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1949028-1949147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928766-1928917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1925721-1925787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1920608-1920750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1919650-1919802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1917513-1917702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1916568-1916633:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1912082-1912180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1909969-1910132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1906865-1906952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1897675-1897723:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1897216-1897250:-1:exon

SPNS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SPNS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 2 isoform X2
translation: MVAAPIFGYLGDRFNRKIILSCGIFFWSAITFSSSFITQKYFWLFVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQVAGDWHWALRVSPLLGMITGTLILIFVPAAKRGNAEQLGAQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCTVQPCGTKDSLIFGAITCFTGFLGVITGAGATKWCRLKTQRADPLVCAVGMLGSAIFTCLIFVAAKSSIVGAYVCIFIGETLLFSNWAITADILMYVVIPTRRATAVALQSFTSHLLGDAGSPYLVGFISDVIRQSTKESVLWEFLSLGYALMLCPFVVVLGGMFFLATALFFLSDRAKAEQQVNQLMMPPASVKV
SIO_010081: SPNS2
subclass of: SO_0000673
so part of: SPNS2
location: complement(join(1897681..1897723,1909969..1910132,1912082..1912180,1916568..1916633,1917513..1917702,1919650..1919802,1920608..1920750,1925721..1925787,1928766..1928917,1949028..1949147))
location: region:1897681-1949147:-1
so has part: feature:1949028-1949147:-1:exon
so has part: feature:1928766-1928917:-1:exon
so has part: feature:1925721-1925787:-1:exon
so has part: feature:1920608-1920750:-1:exon
so has part: feature:1919650-1919802:-1:exon
so has part: feature:1917513-1917702:-1:exon
so has part: feature:1916568-1916633:-1:exon
so has part: feature:1912082-1912180:-1:exon
so has part: feature:1909969-1910132:-1:exon
so has part: feature:1897681-1897723:-1:exon

XP_042298461.1
type: Protein
SIO_000068: ncbiprotein

position:1897681:-1
position: 1897681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1949028-1949147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928766-1928917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1925721-1925787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1920608-1920750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1919650-1919802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1917513-1917702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1916568-1916633:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1912082-1912180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1909969-1910132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1897681-1897723:-1:exon

SPNS3
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: SPNS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2029057..2069070)
location: region:2029057-2069070:-1
so has part: feature:2029057-2069070:-1:exon
subclass of: SO_0000010

121916770
type: Gene
SIO_000068: ncbigene

position:2029057:-1
position: 2029057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2069070:-1
position: 2069070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2029057-2069070:-1:exon

SPNS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SPNS3
product: sphingolipid transporter 3 (putative), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442207.1
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029057..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053747,2066353..2066471,2069031..2069070))
location: region:2029057-2069070:-1
so has part: feature:2069031-2069070:-1:exon
so has part: feature:2066353-2066471:-1:exon
so has part: feature:2053445-2053747:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029057-2029963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2069031-2069070:-1:exon

position:2069031:-1
position: 2069031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2066353-2066471:-1:exon

position:2066353:-1
position: 2066353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2066471:-1
position: 2066471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2053445-2053747:-1:exon

position:2053445:-1
position: 2053445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053747:-1
position: 2053747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2048246-2048311:-1:exon

position:2048246:-1
position: 2048246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2048311:-1
position: 2048311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2043822-2043958:-1:exon

position:2043822:-1
position: 2043822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043958:-1
position: 2043958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2042129-2042280:-1:exon

position:2042129:-1
position: 2042129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2042280:-1
position: 2042280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2041193-2041259:-1:exon

position:2041193:-1
position: 2041193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2041259:-1
position: 2041259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2039505-2039647:-1:exon

position:2039505:-1
position: 2039505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039647:-1
position: 2039647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2037463-2037618:-1:exon

position:2037463:-1
position: 2037463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037618:-1
position: 2037618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2036120-2036309:-1:exon

position:2036120:-1
position: 2036120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036309:-1
position: 2036309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2035254-2035319:-1:exon

position:2035254:-1
position: 2035254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2035319:-1
position: 2035319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2034265-2034363:-1:exon

position:2034265:-1
position: 2034265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034363:-1
position: 2034363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2032074-2032251:-1:exon

position:2032074:-1
position: 2032074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032251:-1
position: 2032251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2029057-2029963:-1:exon

position:2029963:-1
position: 2029963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPNS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SPNS3
product: sphingolipid transporter 3 (putative), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442208.1
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029057..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053747,2058104..2058373))
location: region:2029057-2058373:-1
so has part: feature:2058104-2058373:-1:exon
so has part: feature:2053445-2053747:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029057-2029963:-1:exon

position:2058373:-1
position: 2058373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2058104-2058373:-1:exon

position:2058104:-1
position: 2058104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2053445-2053747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2029057-2029963:-1:exon

SPNS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SPNS3
product: sphingolipid transporter 3 (putative), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442209.1
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029057..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053747,2054844..2054957))
location: region:2029057-2054957:-1
so has part: feature:2054844-2054957:-1:exon
so has part: feature:2053445-2053747:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029057-2029963:-1:exon

position:2054957:-1
position: 2054957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2054844-2054957:-1:exon

position:2054844:-1
position: 2054844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2053445-2053747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2029057-2029963:-1:exon

SPNS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SPNS3
product: sphingolipid transporter 3 (putative), transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442211.1
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029057..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053747,2054674..2054720))
location: region:2029057-2054720:-1
so has part: feature:2054674-2054720:-1:exon
so has part: feature:2053445-2053747:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029057-2029963:-1:exon

position:2054720:-1
position: 2054720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2054674-2054720:-1:exon

position:2054674:-1
position: 2054674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2053445-2053747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2029057-2029963:-1:exon

SPNS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SPNS3
product: sphingolipid transporter 3 (putative), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442206.1
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029057..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2050422..2050645))
location: region:2029057-2050645:-1
so has part: feature:2050422-2050645:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029057-2029963:-1:exon

position:2050645:-1
position: 2050645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050422-2050645:-1:exon

position:2050422:-1
position: 2050422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2029057-2029963:-1:exon

SPNS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SPNS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X2
translation: MQGVLLDIQKYFTLGDSTAGLMHTVFILCFLFAAPLFGYLGDRYNRKVILGAGIFLWSGVTLGSSFISESMAWLFFISRGLVGAGTASYSTLAPTIIADLFEKDHRTWMLSLFYIFIPVGSGFGYILSSGMAQATGHWSWGFRVTPCMGVVGLALLIFLVPESANYGTEKKTGEHAEASTWLKDISSLCKNWSFLWSSLGVTAMGFVTGALSFWVPVFLYRAQLVLQHVPPCEKVETCNTANSRIFGGITIATGILGVVTGAEAARRYKKINAKADPLICALGSLTSAPCMYLAIMLAQESILATYIFIALAEFLLSLNWAVVTDILLYVVKPACQSTAVSLQIFVSHLLGDAGSPYLIGIIADTIQGNQGDRTYLWDFRSLQYSFVLCTFVGVLGGGCFLMTALHIEEDQKKAATPPVPGTENKSYISHEEGL
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029920..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053451))
location: region:2029920-2053451:-1
so has part: feature:2053445-2053451:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029920-2029963:-1:exon

XP_042298141.1
type: Protein
SIO_000068: ncbiprotein

position:2029920:-1
position: 2029920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053451:-1
position: 2053451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2053445-2053451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2029920-2029963:-1:exon

SPNS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SPNS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X2
translation: MQGVLLDIQKYFTLGDSTAGLMHTVFILCFLFAAPLFGYLGDRYNRKVILGAGIFLWSGVTLGSSFISESMAWLFFISRGLVGAGTASYSTLAPTIIADLFEKDHRTWMLSLFYIFIPVGSGFGYILSSGMAQATGHWSWGFRVTPCMGVVGLALLIFLVPESANYGTEKKTGEHAEASTWLKDISSLCKNWSFLWSSLGVTAMGFVTGALSFWVPVFLYRAQLVLQHVPPCEKVETCNTANSRIFGGITIATGILGVVTGAEAARRYKKINAKADPLICALGSLTSAPCMYLAIMLAQESILATYIFIALAEFLLSLNWAVVTDILLYVVKPACQSTAVSLQIFVSHLLGDAGSPYLIGIIADTIQGNQGDRTYLWDFRSLQYSFVLCTFVGVLGGGCFLMTALHIEEDQKKAATPPVPGTENKSYISHEEGL
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029920..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053451))
location: region:2029920-2053451:-1
so has part: feature:2053445-2053451:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029920-2029963:-1:exon

XP_042298142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2053445-2053451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2029920-2029963:-1:exon

SPNS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SPNS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X2
translation: MQGVLLDIQKYFTLGDSTAGLMHTVFILCFLFAAPLFGYLGDRYNRKVILGAGIFLWSGVTLGSSFISESMAWLFFISRGLVGAGTASYSTLAPTIIADLFEKDHRTWMLSLFYIFIPVGSGFGYILSSGMAQATGHWSWGFRVTPCMGVVGLALLIFLVPESANYGTEKKTGEHAEASTWLKDISSLCKNWSFLWSSLGVTAMGFVTGALSFWVPVFLYRAQLVLQHVPPCEKVETCNTANSRIFGGITIATGILGVVTGAEAARRYKKINAKADPLICALGSLTSAPCMYLAIMLAQESILATYIFIALAEFLLSLNWAVVTDILLYVVKPACQSTAVSLQIFVSHLLGDAGSPYLIGIIADTIQGNQGDRTYLWDFRSLQYSFVLCTFVGVLGGGCFLMTALHIEEDQKKAATPPVPGTENKSYISHEEGL
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029920..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053451))
location: region:2029920-2053451:-1
so has part: feature:2053445-2053451:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029920-2029963:-1:exon

XP_042298143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2053445-2053451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2029920-2029963:-1:exon

SPNS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SPNS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X2
translation: MQGVLLDIQKYFTLGDSTAGLMHTVFILCFLFAAPLFGYLGDRYNRKVILGAGIFLWSGVTLGSSFISESMAWLFFISRGLVGAGTASYSTLAPTIIADLFEKDHRTWMLSLFYIFIPVGSGFGYILSSGMAQATGHWSWGFRVTPCMGVVGLALLIFLVPESANYGTEKKTGEHAEASTWLKDISSLCKNWSFLWSSLGVTAMGFVTGALSFWVPVFLYRAQLVLQHVPPCEKVETCNTANSRIFGGITIATGILGVVTGAEAARRYKKINAKADPLICALGSLTSAPCMYLAIMLAQESILATYIFIALAEFLLSLNWAVVTDILLYVVKPACQSTAVSLQIFVSHLLGDAGSPYLIGIIADTIQGNQGDRTYLWDFRSLQYSFVLCTFVGVLGGGCFLMTALHIEEDQKKAATPPVPGTENKSYISHEEGL
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029920..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2053445..2053451))
location: region:2029920-2053451:-1
so has part: feature:2053445-2053451:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029920-2029963:-1:exon

XP_042298145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2053445-2053451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2029920-2029963:-1:exon

SPNS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SPNS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X1
translation: MVMPEGTAMGLPPLSPLSLKAYGTMDPYEQPWGPTKSPTKRSYLVVAVLCYLNLVNYMDWFLVAGVLLDIQKYFTLGDSTAGLMHTVFILCFLFAAPLFGYLGDRYNRKVILGAGIFLWSGVTLGSSFISESMAWLFFISRGLVGAGTASYSTLAPTIIADLFEKDHRTWMLSLFYIFIPVGSGFGYILSSGMAQATGHWSWGFRVTPCMGVVGLALLIFLVPESANYGTEKKTGEHAEASTWLKDISSLCKNWSFLWSSLGVTAMGFVTGALSFWVPVFLYRAQLVLQHVPPCEKVETCNTANSRIFGGITIATGILGVVTGAEAARRYKKINAKADPLICALGSLTSAPCMYLAIMLAQESILATYIFIALAEFLLSLNWAVVTDILLYVVKPACQSTAVSLQIFVSHLLGDAGSPYLIGIIADTIQGNQGDRTYLWDFRSLQYSFVLCTFVGVLGGGCFLMTALHIEEDQKKAATPPVPGTENKSYISHEEGL
SIO_010081: SPNS3
subclass of: SO_0000673
so part of: SPNS3
location: complement(join(2029920..2029963,2032074..2032251,2034265..2034363,2035254..2035319,2036120..2036309,2037463..2037618,2039505..2039647,2041193..2041259,2042129..2042280,2043822..2043958,2048246..2048311,2050422..2050614))
location: region:2029920-2050614:-1
so has part: feature:2050422-2050614:-1:exon
so has part: feature:2048246-2048311:-1:exon
so has part: feature:2043822-2043958:-1:exon
so has part: feature:2042129-2042280:-1:exon
so has part: feature:2041193-2041259:-1:exon
so has part: feature:2039505-2039647:-1:exon
so has part: feature:2037463-2037618:-1:exon
so has part: feature:2036120-2036309:-1:exon
so has part: feature:2035254-2035319:-1:exon
so has part: feature:2034265-2034363:-1:exon
so has part: feature:2032074-2032251:-1:exon
so has part: feature:2029920-2029963:-1:exon

XP_042298140.1
type: Protein
SIO_000068: ncbiprotein

position:2050614:-1
position: 2050614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050422-2050614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048246-2048311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043822-2043958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2042129-2042280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2041193-2041259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2039505-2039647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2037463-2037618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036120-2036309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035254-2035319:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2034265-2034363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2032074-2032251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2029920-2029963:-1:exon

UBE2G1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: UBE2G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2069381..2623697
location: region:2069381-2623697:1
so has part: feature:2069381-2623697:1:exon
subclass of: SO_0000010

121917159
type: Gene
SIO_000068: ncbigene

position:2069381:1
position: 2069381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2623697:1
position: 2623697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2069381-2623697:1:exon

UBE2G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: UBE2G1
product: ubiquitin conjugating enzyme E2 G1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442895.1
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(2069381..2069737,2090530..2090632,2094509..2094601,2096105..2096283,2098242..2098366,2622623..2623697)
location: region:2069381-2623697:1
so has part: feature:2069381-2069737:1:exon
so has part: feature:2090530-2090632:1:exon
so has part: feature:2094509-2094601:1:exon
so has part: feature:2096105-2096283:1:exon
so has part: feature:2098242-2098366:1:exon
so has part: feature:2622623-2623697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2069381-2069737:1:exon

position:2069737:1
position: 2069737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2090530-2090632:1:exon

position:2090530:1
position: 2090530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090632:1
position: 2090632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2094509-2094601:1:exon

position:2094509:1
position: 2094509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094601:1
position: 2094601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2096105-2096283:1:exon

position:2096105:1
position: 2096105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096283:1
position: 2096283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2098242-2098366:1:exon

position:2098242:1
position: 2098242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098366:1
position: 2098366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2622623-2623697:1:exon

position:2622623:1
position: 2622623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: UBE2G1
product: ubiquitin conjugating enzyme E2 G1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_042442894.1
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(2069385..2069737,2090530..2090632,2094504..2094601,2096105..2096283,2098242..2098366,2103214..2103247)
location: region:2069385-2103247:1
so has part: feature:2069385-2069737:1:exon
so has part: feature:2090530-2090632:1:exon
so has part: feature:2094504-2094601:1:exon
so has part: feature:2096105-2096283:1:exon
so has part: feature:2098242-2098366:1:exon
so has part: feature:2103214-2103247:1:exon

position:2069385:1
position: 2069385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103247:1
position: 2103247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2069385-2069737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2090530-2090632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2094504-2094601:1:exon

position:2094504:1
position: 2094504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2096105-2096283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098242-2098366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2103214-2103247:1:exon

position:2103214:1
position: 2103214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: UBE2G1
product: ubiquitin conjugating enzyme E2 G1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442893.1
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(2069388..2069737,2090530..2090632,2094504..2094601,2096105..2096283,2098242..2098366,2622623..2623697)
location: region:2069388-2623697:1
so has part: feature:2069388-2069737:1:exon
so has part: feature:2090530-2090632:1:exon
so has part: feature:2094504-2094601:1:exon
so has part: feature:2096105-2096283:1:exon
so has part: feature:2098242-2098366:1:exon
so has part: feature:2622623-2623697:1:exon

position:2069388:1
position: 2069388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2069388-2069737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2090530-2090632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2094504-2094601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096105-2096283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098242-2098366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622623-2623697:1:exon

UBE2G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: UBE2G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 G1 isoform X1
translation: MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQETAFE
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(2069692..2069737,2090530..2090632,2094504..2094601,2096105..2096283,2098242..2098328)
location: region:2069692-2098328:1
so has part: feature:2069692-2069737:1:exon
so has part: feature:2090530-2090632:1:exon
so has part: feature:2094504-2094601:1:exon
so has part: feature:2096105-2096283:1:exon
so has part: feature:2098242-2098328:1:exon

XP_042298827.1
type: Protein
SIO_000068: ncbiprotein

position:2069692:1
position: 2069692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098328:1
position: 2098328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2069692-2069737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2090530-2090632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2094504-2094601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096105-2096283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098242-2098328:1:exon

UBE2G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: UBE2G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 G1 isoform X1
translation: MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQETAFE
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(2069692..2069737,2090530..2090632,2094504..2094601,2096105..2096283,2098242..2098328)
location: region:2069692-2098328:1
so has part: feature:2069692-2069737:1:exon
so has part: feature:2090530-2090632:1:exon
so has part: feature:2094504-2094601:1:exon
so has part: feature:2096105-2096283:1:exon
so has part: feature:2098242-2098328:1:exon

XP_042298828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2069692-2069737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2090530-2090632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2094504-2094601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096105-2096283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098242-2098328:1:exon

UBE2G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: UBE2G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 G1 isoform X2
translation: MTTISIDGKSSLLALQIHCSGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQETAFE
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(2090575..2090632,2094509..2094601,2096105..2096283,2098242..2098328)
location: region:2090575-2098328:1
so has part: feature:2090575-2090632:1:exon
so has part: feature:2094509-2094601:1:exon
so has part: feature:2096105-2096283:1:exon
so has part: feature:2098242-2098328:1:exon

XP_042298829.1
type: Protein
SIO_000068: ncbiprotein

position:2090575:1
position: 2090575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2090575-2090632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094509-2094601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2096105-2096283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2098242-2098328:1:exon

ANKFY1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: ANKFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2126798..2155703
location: region:2126798-2155703:1
so has part: feature:2126798-2155703:1:exon
subclass of: SO_0000010

121916977
type: Gene
SIO_000068: ncbigene

position:2126798:1
position: 2126798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2155703:1
position: 2155703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2126798-2155703:1:exon

ANKFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: ANKFY1
product: ankyrin repeat and FYVE domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_042442570.1
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(2126798..2126811,2127258..2127376,2129617..2129752,2130853..2130976,2133574..2133723,2134812..2134977,2135780..2135984,2137825..2137893,2138831..2139030,2140010..2140107,2141631..2141856,2142688..2142786,2143133..2143286,2143511..2143679,2144741..2144859,2145697..2145853,2145935..2146136,2147451..2147627,2148049..2148196,2149538..2149628,2150510..2150634,2151920..2152066,2152372..2152462,2153031..2155703)
location: region:2126798-2155703:1
so has part: feature:2126798-2126811:1:exon
so has part: feature:2127258-2127376:1:exon
so has part: feature:2129617-2129752:1:exon
so has part: feature:2130853-2130976:1:exon
so has part: feature:2133574-2133723:1:exon
so has part: feature:2134812-2134977:1:exon
so has part: feature:2135780-2135984:1:exon
so has part: feature:2137825-2137893:1:exon
so has part: feature:2138831-2139030:1:exon
so has part: feature:2140010-2140107:1:exon
so has part: feature:2141631-2141856:1:exon
so has part: feature:2142688-2142786:1:exon
so has part: feature:2143133-2143286:1:exon
so has part: feature:2143511-2143679:1:exon
so has part: feature:2144741-2144859:1:exon
so has part: feature:2145697-2145853:1:exon
so has part: feature:2145935-2146136:1:exon
so has part: feature:2147451-2147627:1:exon
so has part: feature:2148049-2148196:1:exon
so has part: feature:2149538-2149628:1:exon
so has part: feature:2150510-2150634:1:exon
so has part: feature:2151920-2152066:1:exon
so has part: feature:2152372-2152462:1:exon
so has part: feature:2153031-2155703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2126798-2126811:1:exon

position:2126811:1
position: 2126811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2127258-2127376:1:exon

position:2127258:1
position: 2127258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2127376:1
position: 2127376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2129617-2129752:1:exon

position:2129617:1
position: 2129617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129752:1
position: 2129752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2130853-2130976:1:exon

position:2130853:1
position: 2130853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2130976:1
position: 2130976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2133574-2133723:1:exon

position:2133574:1
position: 2133574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133723:1
position: 2133723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2134812-2134977:1:exon

position:2134812:1
position: 2134812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2134977:1
position: 2134977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2135780-2135984:1:exon

position:2135780:1
position: 2135780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2135984:1
position: 2135984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2137825-2137893:1:exon

position:2137825:1
position: 2137825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2137893:1
position: 2137893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2138831-2139030:1:exon

position:2138831:1
position: 2138831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139030:1
position: 2139030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2140010-2140107:1:exon

position:2140010:1
position: 2140010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2140107:1
position: 2140107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2141631-2141856:1:exon

position:2141631:1
position: 2141631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2141856:1
position: 2141856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2142688-2142786:1:exon

position:2142688:1
position: 2142688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2142786:1
position: 2142786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2143133-2143286:1:exon

position:2143133:1
position: 2143133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2143286:1
position: 2143286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2143511-2143679:1:exon

position:2143511:1
position: 2143511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2143679:1
position: 2143679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2144741-2144859:1:exon

position:2144741:1
position: 2144741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2144859:1
position: 2144859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2145697-2145853:1:exon

position:2145697:1
position: 2145697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2145853:1
position: 2145853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2145935-2146136:1:exon

position:2145935:1
position: 2145935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2146136:1
position: 2146136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2147451-2147627:1:exon

position:2147451:1
position: 2147451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147627:1
position: 2147627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2148049-2148196:1:exon

position:2148049:1
position: 2148049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2148196:1
position: 2148196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2149538-2149628:1:exon

position:2149538:1
position: 2149538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2149628:1
position: 2149628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2150510-2150634:1:exon

position:2150510:1
position: 2150510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150634:1
position: 2150634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2151920-2152066:1:exon

position:2151920:1
position: 2151920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2152066:1
position: 2152066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2152372-2152462:1:exon

position:2152372:1
position: 2152372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2152462:1
position: 2152462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2153031-2155703:1:exon

position:2153031:1
position: 2153031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: ANKFY1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rabankyrin-5
translation: MANLCDLKIKVGGKRICAHKFVLAARSETWSLANLVSTEELDLSDADPEVTMAMLRWIYTDELELREDDVFLTELMKLANKFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSMSAQLLYKMIKSKTEFPLHKAIKVEREDVVFLYLIEMDSQLPGKLNELDHNGDLALDLALSRRLESIATTLVNSKADIDMVDKKGWSLLHKAVKRGDTFAANFLIKNGARVNAATLGDQETPLHIVASYNPKKHKPDTMVEMARIAESLLKAGANPNMQDSQGRTPLHASIAVRNDHVFSQLLQCKQLDLELKDHEGSTALWLAVQYITVSSDPSVNPFEDVPVENGTSFDENSFAARLIQRGSNTDAPDTVTGNCLLQRAAGTGNEAAALFLATHGAKVNHKNTWGETPLHTACRHGLANLTAELLHQGANPNIQTEKAVPAKKGTAIPSTADNVSLQTPLHMAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGASINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADISVRTQDGETALQLAIKNQLPLVVDAICTRGADMSVPDDKGNPPLWLALENDLEDIASTLVRHGCDATCWGPGPSGCLQTLLHRAIDENNEQIACFLIRSGCDVNSPRQPGANGEGDEEAHDAQTPLHLAACWGLEETVQCLLEFGANVNAQDAEGRTPIHVAIINQHGVIIQLMISHPDIQLNIRDRQGMTPFACAMTYKNNKAAEAILKRSRGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNSRVQDASKLTPLHLAVQAGSEIIVRNLLLAGAKVNELNKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMQGRLTNIRVLLTECTVDAEAFNVRGQSPMHILGQYGKDNAAAIFDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCRAIVRAGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSNCYECSAKFGVTTRKHHCRHCGRLLCHRCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(2126798..2126811,2127258..2127376,2129617..2129752,2130853..2130976,2133574..2133723,2134812..2134977,2135780..2135984,2137825..2137893,2138831..2139030,2140010..2140107,2141631..2141856,2142688..2142786,2143133..2143286,2143511..2143679,2144741..2144859,2145697..2145853,2145935..2146136,2147451..2147627,2148049..2148196,2149538..2149628,2150510..2150634,2151920..2152066,2152372..2152462,2153031..2153163)
location: region:2126798-2153163:1
so has part: feature:2126798-2126811:1:exon
so has part: feature:2127258-2127376:1:exon
so has part: feature:2129617-2129752:1:exon
so has part: feature:2130853-2130976:1:exon
so has part: feature:2133574-2133723:1:exon
so has part: feature:2134812-2134977:1:exon
so has part: feature:2135780-2135984:1:exon
so has part: feature:2137825-2137893:1:exon
so has part: feature:2138831-2139030:1:exon
so has part: feature:2140010-2140107:1:exon
so has part: feature:2141631-2141856:1:exon
so has part: feature:2142688-2142786:1:exon
so has part: feature:2143133-2143286:1:exon
so has part: feature:2143511-2143679:1:exon
so has part: feature:2144741-2144859:1:exon
so has part: feature:2145697-2145853:1:exon
so has part: feature:2145935-2146136:1:exon
so has part: feature:2147451-2147627:1:exon
so has part: feature:2148049-2148196:1:exon
so has part: feature:2149538-2149628:1:exon
so has part: feature:2150510-2150634:1:exon
so has part: feature:2151920-2152066:1:exon
so has part: feature:2152372-2152462:1:exon
so has part: feature:2153031-2153163:1:exon

XP_042298504.1
type: Protein
SIO_000068: ncbiprotein

position:2153163:1
position: 2153163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2126798-2126811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2127258-2127376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2129617-2129752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2130853-2130976:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2133574-2133723:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2134812-2134977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2135780-2135984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2137825-2137893:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2138831-2139030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140010-2140107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2141631-2141856:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2142688-2142786:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2143133-2143286:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2143511-2143679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2144741-2144859:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2145697-2145853:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2145935-2146136:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2147451-2147627:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2148049-2148196:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2149538-2149628:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2150510-2150634:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2151920-2152066:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2152372-2152462:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2153031-2153163:1:exon

LOC121917154
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2156634..2162085)
location: region:2156634-2162085:-1
so has part: feature:2156634-2162085:-1:exon
subclass of: SO_0000010

121917154
type: Gene
SIO_000068: ncbigene

position:2156634:-1
position: 2156634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2162085:-1
position: 2162085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2156634-2162085:-1:exon

LOC121917154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917154
product: neuferricin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442886.1
SIO_010081: LOC121917154
subclass of: SO_0000673
so part of: LOC121917154
location: complement(join(2156634..2157683,2158363..2158549,2159552..2159692,2160638..2162085))
location: region:2156634-2162085:-1
so has part: feature:2160638-2162085:-1:exon
so has part: feature:2159552-2159692:-1:exon
so has part: feature:2158363-2158549:-1:exon
so has part: feature:2156634-2157683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160638-2162085:-1:exon

position:2160638:-1
position: 2160638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2159552-2159692:-1:exon

position:2159552:-1
position: 2159552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2159692:-1
position: 2159692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2158363-2158549:-1:exon

position:2158363:-1
position: 2158363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2158549:-1
position: 2158549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2156634-2157683:-1:exon

position:2157683:-1
position: 2157683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121917154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuferricin
translation: MLRGALAAFALALAAAWFWGHGFDPGQRPLVLLLSAAELSLCRGSEEGERLLLAVLGQVFDVESGRRHYGPGGAYSSLAGKDASRAFATGDFSPAGLVDDVSGLAPLEMLTIQNWLSFYHKNYAPVGKVVGRFYDENGAPTEYLRQAEALMAEGQRLQAQEEDKKKQFPPCNSEWSSAGGSRVWCSKQSGGVHRDWSGVPRKLYEPGSSHSHCVCVKAQGQPSSPQMSHRGELENPLLQEYEGCHPLAEWCAVKE
SIO_010081: LOC121917154
subclass of: SO_0000673
so part of: LOC121917154
location: complement(join(2157482..2157683,2158363..2158549,2159552..2159692,2160638..2160875))
location: region:2157482-2160875:-1
so has part: feature:2160638-2160875:-1:exon
so has part: feature:2159552-2159692:-1:exon
so has part: feature:2158363-2158549:-1:exon
so has part: feature:2157482-2157683:-1:exon

XP_042298820.1
type: Protein
SIO_000068: ncbiprotein

position:2157482:-1
position: 2157482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2160875:-1
position: 2160875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160638-2160875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2159552-2159692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2158363-2158549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2157482-2157683:-1:exon

LOC121917151
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2162502..2166712)
location: region:2162502-2166712:-1
so has part: feature:2162502-2166712:-1:exon
subclass of: SO_0000010

121917151
type: Gene
SIO_000068: ncbigene

position:2162502:-1
position: 2162502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2166712:-1
position: 2166712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2162502-2166712:-1:exon

LOC121917151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917151
product: putative methyltransferase DDB_G0268948
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442883.1
SIO_010081: LOC121917151
subclass of: SO_0000673
so part of: LOC121917151
location: complement(join(2162502..2162699,2163502..2163639,2163899..2163999,2164151..2164364,2165153..2165310,2166525..2166712))
location: region:2162502-2166712:-1
so has part: feature:2166525-2166712:-1:exon
so has part: feature:2165153-2165310:-1:exon
so has part: feature:2164151-2164364:-1:exon
so has part: feature:2163899-2163999:-1:exon
so has part: feature:2163502-2163639:-1:exon
so has part: feature:2162502-2162699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2166525-2166712:-1:exon

position:2166525:-1
position: 2166525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2165153-2165310:-1:exon

position:2165153:-1
position: 2165153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165310:-1
position: 2165310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2164151-2164364:-1:exon

position:2164151:-1
position: 2164151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2164364:-1
position: 2164364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2163899-2163999:-1:exon

position:2163899:-1
position: 2163899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2163999:-1
position: 2163999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2163502-2163639:-1:exon

position:2163502:-1
position: 2163502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2163639:-1
position: 2163639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2162502-2162699:-1:exon

position:2162699:-1
position: 2162699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121917151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative methyltransferase DDB_G0268948
translation: MATRLFEGKDHAVFYQKYRFSVQENLRKLIFSFMERKVKSFGLAVDVGCGSGQCTHLLAKRFDKVIGTDISEAQIEEAKAAPHPENVSYLACPAEEVPVEDHSVDLVAAFTAAHWFDIPRFMKEVRRILKPSGCMILSSNTLDMRLHYGDCSEKLTEIFREFLDQVAPYASEKVQFVMSDYKEIFDAVPFQDKERITDIFDKVPMTVAELIGYIQSFSTYQTFLKAQPEKARSLVQNSEQRIMETMGVTSRETPLYLCTRHVCVLACRSSEK
SIO_010081: LOC121917151
subclass of: SO_0000673
so part of: LOC121917151
location: complement(join(2162603..2162699,2163502..2163639,2163899..2163999,2164151..2164364,2165153..2165310,2166525..2166635))
location: region:2162603-2166635:-1
so has part: feature:2166525-2166635:-1:exon
so has part: feature:2165153-2165310:-1:exon
so has part: feature:2164151-2164364:-1:exon
so has part: feature:2163899-2163999:-1:exon
so has part: feature:2163502-2163639:-1:exon
so has part: feature:2162603-2162699:-1:exon

XP_042298817.1
type: Protein
SIO_000068: ncbiprotein

position:2162603:-1
position: 2162603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2166635:-1
position: 2166635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2166525-2166635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2165153-2165310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2164151-2164364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2163899-2163999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2163502-2163639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2162603-2162699:-1:exon

LOC121917164
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2168327..2170134)
location: region:2168327-2170134:-1
so has part: feature:2168327-2170134:-1:exon
subclass of: SO_0000011

121917164
type: Gene
SIO_000068: ncbigene

position:2168327:-1
position: 2168327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2170134:-1
position: 2170134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2168327-2170134:-1:exon

LOC121917164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8520
nc RNA class: lncRNA
gene: LOC121917164
product: uncharacterized LOC121917164
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006100969.1
SIO_010081: LOC121917164
subclass of: SO_0000673
so part of: LOC121917164
location: complement(join(2168327..2168998,2169924..2170134))
location: region:2168327-2170134:-1
so has part: feature:2169924-2170134:-1:exon
so has part: feature:2168327-2168998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169924-2170134:-1:exon

position:2169924:-1
position: 2169924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2168327-2168998:-1:exon

position:2168998:-1
position: 2168998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121917149
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2196847..2211375
location: region:2196847-2211375:1
so has part: feature:2196847-2211375:1:exon
subclass of: SO_0000010

121917149
type: Gene
SIO_000068: ncbigene

position:2196847:1
position: 2196847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2211375:1
position: 2211375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2196847-2211375:1:exon

LOC121917149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917149
product: uroplakin-3b-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442880.1
SIO_010081: LOC121917149
subclass of: SO_0000673
so part of: LOC121917149
location: join(2196847..2196973,2200802..2201106,2203423..2203572,2205386..2205608,2207923..2207999,2208484..2208613,2209648..2211375)
location: region:2196847-2211375:1
so has part: feature:2196847-2196973:1:exon
so has part: feature:2200802-2201106:1:exon
so has part: feature:2203423-2203572:1:exon
so has part: feature:2205386-2205608:1:exon
so has part: feature:2207923-2207999:1:exon
so has part: feature:2208484-2208613:1:exon
so has part: feature:2209648-2211375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2196847-2196973:1:exon

position:2196973:1
position: 2196973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2200802-2201106:1:exon

position:2200802:1
position: 2200802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201106:1
position: 2201106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2203423-2203572:1:exon

position:2203423:1
position: 2203423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203572:1
position: 2203572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2205386-2205608:1:exon

position:2205386:1
position: 2205386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2205608:1
position: 2205608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2207923-2207999:1:exon

position:2207923:1
position: 2207923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207999:1
position: 2207999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2208484-2208613:1:exon

position:2208484:1
position: 2208484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2208613:1
position: 2208613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2209648-2211375:1:exon

position:2209648:1
position: 2209648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121917149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917149
product: uroplakin-3b-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442881.1
SIO_010081: LOC121917149
subclass of: SO_0000673
so part of: LOC121917149
location: join(2200354..2200409,2200802..2201106,2203423..2203572,2205386..2205608,2207923..2207999,2208484..2208613,2209648..2211375)
location: region:2200354-2211375:1
so has part: feature:2200354-2200409:1:exon
so has part: feature:2200802-2201106:1:exon
so has part: feature:2203423-2203572:1:exon
so has part: feature:2205386-2205608:1:exon
so has part: feature:2207923-2207999:1:exon
so has part: feature:2208484-2208613:1:exon
so has part: feature:2209648-2211375:1:exon

position:2200354:1
position: 2200354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200354-2200409:1:exon

position:2200409:1
position: 2200409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2200802-2201106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2203423-2203572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2205386-2205608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2207923-2207999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208484-2208613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209648-2211375:1:exon

LOC121917149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uroplakin-3b-like
translation: MGKDRRRVKLIRSSLSGWKALFLPMVVIVTRTQDCGVRSHLPLWGEEASLERRSILTKMTLLHLLLFLGFAGKTSAQIEAISYTPRISDLNMEGKITASTFALEPPSCIFDQVVNASDTIWVVVTYSNATFKFKNPTTPKDVPTYEELYTTYGYMTMKATLDNYPCKKGQAGRVLRIGNESSCKNDDSRTHCNGPLPSPGPFRVKFLAMDTKGSIAETRWSASITLQKALAWKTLDTWPGRREGDMIVITVILSALCGVVTIGFLGTVIYECVKTWRQPDENQQEPRQDPEPSFQGSRYDTHHIPPAPPVPPPPPSADVPSPQLISTSH
SIO_010081: LOC121917149
subclass of: SO_0000673
so part of: LOC121917149
location: join(2200872..2201106,2203423..2203572,2205386..2205608,2207923..2207999,2208484..2208613,2209648..2209822)
location: region:2200872-2209822:1
so has part: feature:2200872-2201106:1:exon
so has part: feature:2203423-2203572:1:exon
so has part: feature:2205386-2205608:1:exon
so has part: feature:2207923-2207999:1:exon
so has part: feature:2208484-2208613:1:exon
so has part: feature:2209648-2209822:1:exon

XP_042298814.1
type: Protein
SIO_000068: ncbiprotein

position:2200872:1
position: 2200872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209822:1
position: 2209822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200872-2201106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2203423-2203572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2205386-2205608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2207923-2207999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2208484-2208613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2209648-2209822:1:exon

LOC121917149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uroplakin-3b-like
translation: MGKDRRRVKLIRSSLSGWKALFLPMVVIVTRTQDCGVRSHLPLWGEEASLERRSILTKMTLLHLLLFLGFAGKTSAQIEAISYTPRISDLNMEGKITASTFALEPPSCIFDQVVNASDTIWVVVTYSNATFKFKNPTTPKDVPTYEELYTTYGYMTMKATLDNYPCKKGQAGRVLRIGNESSCKNDDSRTHCNGPLPSPGPFRVKFLAMDTKGSIAETRWSASITLQKALAWKTLDTWPGRREGDMIVITVILSALCGVVTIGFLGTVIYECVKTWRQPDENQQEPRQDPEPSFQGSRYDTHHIPPAPPVPPPPPSADVPSPQLISTSH
SIO_010081: LOC121917149
subclass of: SO_0000673
so part of: LOC121917149
location: join(2200872..2201106,2203423..2203572,2205386..2205608,2207923..2207999,2208484..2208613,2209648..2209822)
location: region:2200872-2209822:1
so has part: feature:2200872-2201106:1:exon
so has part: feature:2203423-2203572:1:exon
so has part: feature:2205386-2205608:1:exon
so has part: feature:2207923-2207999:1:exon
so has part: feature:2208484-2208613:1:exon
so has part: feature:2209648-2209822:1:exon

XP_042298815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2200872-2201106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2203423-2203572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2205386-2205608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2207923-2207999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2208484-2208613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2209648-2209822:1:exon

LOC121917155
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2217058..2226658
location: region:2217058-2226658:1
so has part: feature:2217058-2226658:1:exon
subclass of: SO_0000010

121917155
type: Gene
SIO_000068: ncbigene

position:2217058:1
position: 2217058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226658:1
position: 2226658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2217058-2226658:1:exon

LOC121917155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917155
product: uroplakin-3b-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442888.1
SIO_010081: LOC121917155
subclass of: SO_0000673
so part of: LOC121917155
location: join(2217058..2217128,2221746..2221895,2223030..2223261,2224502..2224578,2225513..2225642,2226345..2226658)
location: region:2217058-2226658:1
so has part: feature:2217058-2217128:1:exon
so has part: feature:2221746-2221895:1:exon
so has part: feature:2223030-2223261:1:exon
so has part: feature:2224502-2224578:1:exon
so has part: feature:2225513-2225642:1:exon
so has part: feature:2226345-2226658:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2217058-2217128:1:exon

position:2217128:1
position: 2217128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2221746-2221895:1:exon

position:2221746:1
position: 2221746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221895:1
position: 2221895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2223030-2223261:1:exon

position:2223030:1
position: 2223030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223261:1
position: 2223261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2224502-2224578:1:exon

position:2224502:1
position: 2224502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224578:1
position: 2224578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2225513-2225642:1:exon

position:2225513:1
position: 2225513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225642:1
position: 2225642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2226345-2226658:1:exon

position:2226345:1
position: 2226345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121917155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uroplakin-3b-like
translation: MMFLSTVILVGLALRTVAAEVPSEYTPRLTSENIGGRITASTFVLDQPRCVFNDAVNATDEIWLLVARSNALNNFTLPRSPNELPYQQFEKNSFYTTLNTIPANYPCPDPAQPSNQLAILRVGNEVKCASDPTRPDCNGPLPGPGPYRVKFLAFNSEGVTAETKWSSEIPLTQGKNPATIDTWPGRRSAGMIVITTILSILSAILVAALIAALLYKYSDVCGSADIVSVRDLTITRYTTHHIYDQPAQKL
SIO_010081: LOC121917155
subclass of: SO_0000673
so part of: LOC121917155
location: join(2217068..2217128,2221746..2221895,2223030..2223261,2224502..2224578,2225513..2225642,2226345..2226447)
location: region:2217068-2226447:1
so has part: feature:2217068-2217128:1:exon
so has part: feature:2221746-2221895:1:exon
so has part: feature:2223030-2223261:1:exon
so has part: feature:2224502-2224578:1:exon
so has part: feature:2225513-2225642:1:exon
so has part: feature:2226345-2226447:1:exon

XP_042298822.1
type: Protein
SIO_000068: ncbiprotein

position:2217068:1
position: 2217068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226447:1
position: 2226447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2217068-2217128:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2221746-2221895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2223030-2223261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224502-2224578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225513-2225642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2226345-2226447:1:exon

LOC121917152
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2231058..2237296)
location: region:2231058-2237296:-1
so has part: feature:2231058-2237296:-1:exon
subclass of: SO_0000010

121917152
type: Gene
SIO_000068: ncbigene

position:2231058:-1
position: 2231058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2237296:-1
position: 2237296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2231058-2237296:-1:exon

LOC121917152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917152
product: putative methyltransferase DDB_G0268948
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442884.1
SIO_010081: LOC121917152
subclass of: SO_0000673
so part of: LOC121917152
location: complement(join(2231058..2231769,2232009..2232146,2232908..2233008,2234260..2234473,2235951..2236108,2236716..2237296))
location: region:2231058-2237296:-1
so has part: feature:2236716-2237296:-1:exon
so has part: feature:2235951-2236108:-1:exon
so has part: feature:2234260-2234473:-1:exon
so has part: feature:2232908-2233008:-1:exon
so has part: feature:2232009-2232146:-1:exon
so has part: feature:2231058-2231769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2236716-2237296:-1:exon

position:2236716:-1
position: 2236716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2235951-2236108:-1:exon

position:2235951:-1
position: 2235951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236108:-1
position: 2236108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2234260-2234473:-1:exon

position:2234260:-1
position: 2234260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2234473:-1
position: 2234473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2232908-2233008:-1:exon

position:2232908:-1
position: 2232908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233008:-1
position: 2233008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2232009-2232146:-1:exon

position:2232009:-1
position: 2232009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232146:-1
position: 2232146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2231058-2231769:-1:exon

position:2231769:-1
position: 2231769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121917152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative methyltransferase DDB_G0268948
translation: MATHLFEDRIHAAFYQKYRFTPQENLQRAIFSYLEKKVNSFRLAVDVGCGSGQSTLFLAKHFEKVVGMDISAAQIEEAKRAPHPPNVSYAVSPAEDLPFEAGSVDLITAFASVHWFDTPRFLSEVDRVLKPSGCVVFSSYNQDMRVCYRDLTEKLTQIFTENRDQLFNYADEKVKGVLNDYQEVFDALPYADKERLTDIVDKVPMSIADLMGYIQSLSMYQAFQKAQPEAAKALLQNTERRFLETMSVSSRKTQVELEMRHVCILGCKMS
SIO_010081: LOC121917152
subclass of: SO_0000673
so part of: LOC121917152
location: complement(join(2231679..2231769,2232009..2232146,2232908..2233008,2234260..2234473,2235951..2236108,2236716..2236826))
location: region:2231679-2236826:-1
so has part: feature:2236716-2236826:-1:exon
so has part: feature:2235951-2236108:-1:exon
so has part: feature:2234260-2234473:-1:exon
so has part: feature:2232908-2233008:-1:exon
so has part: feature:2232009-2232146:-1:exon
so has part: feature:2231679-2231769:-1:exon

XP_042298818.1
type: Protein
SIO_000068: ncbiprotein

position:2231679:-1
position: 2231679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236826:-1
position: 2236826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2236716-2236826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2235951-2236108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2234260-2234473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232908-2233008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2232009-2232146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2231679-2231769:-1:exon

LOC121917162
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2239212..2240918)
location: region:2239212-2240918:-1
so has part: feature:2239212-2240918:-1:exon
subclass of: SO_0000011

121917162
type: Gene
SIO_000068: ncbigene

position:2239212:-1
position: 2239212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240918:-1
position: 2240918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2239212-2240918:-1:exon

LOC121917162
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8520
nc RNA class: lncRNA
gene: LOC121917162
product: uncharacterized LOC121917162
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_006100967.1
SIO_010081: LOC121917162
subclass of: SO_0000673
so part of: LOC121917162
location: complement(join(2239212..2240126,2240235..2240302,2240439..2240610,2240778..2240918))
location: region:2239212-2240918:-1
so has part: feature:2240778-2240918:-1:exon
so has part: feature:2240439-2240610:-1:exon
so has part: feature:2240235-2240302:-1:exon
so has part: feature:2239212-2240126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2240778-2240918:-1:exon

position:2240778:-1
position: 2240778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2240439-2240610:-1:exon

position:2240439:-1
position: 2240439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240610:-1
position: 2240610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2240235-2240302:-1:exon

position:2240235:-1
position: 2240235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240302:-1
position: 2240302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2239212-2240126:-1:exon

position:2240126:-1
position: 2240126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121917163
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2241012..2247805)
location: region:2241012-2247805:-1
so has part: feature:2241012-2247805:-1:exon
subclass of: SO_0000011

121917163
type: Gene
SIO_000068: ncbigene

position:2241012:-1
position: 2241012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2247805:-1
position: 2247805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2241012-2247805:-1:exon

LOC121917163
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8520
nc RNA class: lncRNA
gene: LOC121917163
product: uncharacterized LOC121917163
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006100968.1
SIO_010081: LOC121917163
subclass of: SO_0000673
so part of: LOC121917163
location: complement(join(2241012..2241145,2241246..2241374,2241760..2241826,2247724..2247805))
location: region:2241012-2247805:-1
so has part: feature:2247724-2247805:-1:exon
so has part: feature:2241760-2241826:-1:exon
so has part: feature:2241246-2241374:-1:exon
so has part: feature:2241012-2241145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2247724-2247805:-1:exon

position:2247724:-1
position: 2247724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2241760-2241826:-1:exon

position:2241760:-1
position: 2241760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2241826:-1
position: 2241826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2241246-2241374:-1:exon

position:2241246:-1
position: 2241246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2241374:-1
position: 2241374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2241012-2241145:-1:exon

position:2241145:-1
position: 2241145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916978
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2248211..2254279
location: region:2248211-2254279:1
so has part: feature:2248211-2254279:1:exon
subclass of: SO_0000010

121916978
type: Gene
SIO_000068: ncbigene

position:2248211:1
position: 2248211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254279:1
position: 2254279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2248211-2254279:1:exon

LOC121916978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916978
product: uncharacterized LOC121916978
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442571.1
SIO_010081: LOC121916978
subclass of: SO_0000673
so part of: LOC121916978
location: join(2248211..2248427,2249408..2249522,2250428..2250567,2251506..2251604,2252104..2252347,2253023..2253284,2253375..2253457,2253589..2253639,2253959..2254279)
location: region:2248211-2254279:1
so has part: feature:2248211-2248427:1:exon
so has part: feature:2249408-2249522:1:exon
so has part: feature:2250428-2250567:1:exon
so has part: feature:2251506-2251604:1:exon
so has part: feature:2252104-2252347:1:exon
so has part: feature:2253023-2253284:1:exon
so has part: feature:2253375-2253457:1:exon
so has part: feature:2253589-2253639:1:exon
so has part: feature:2253959-2254279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2248211-2248427:1:exon

position:2248427:1
position: 2248427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2249408-2249522:1:exon

position:2249408:1
position: 2249408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249522:1
position: 2249522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2250428-2250567:1:exon

position:2250428:1
position: 2250428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2250567:1
position: 2250567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2251506-2251604:1:exon

position:2251506:1
position: 2251506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2251604:1
position: 2251604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2252104-2252347:1:exon

position:2252104:1
position: 2252104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2252347:1
position: 2252347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2253023-2253284:1:exon

position:2253023:1
position: 2253023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2253284:1
position: 2253284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2253375-2253457:1:exon

position:2253375:1
position: 2253375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2253457:1
position: 2253457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2253589-2253639:1:exon

position:2253589:1
position: 2253589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2253639:1
position: 2253639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2253959-2254279:1:exon

position:2253959:1
position: 2253959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121916978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121916978
translation: MAARGLGRDRSLRGGVASPAAQEDAEAWLGLPALRATSSTRRGSWRRTAAELERNLHFLQRQLARPWPSSTGELHYQLIMYPVLQNVQVPSDPSAPKPLLFLGPLPSSVSWVDKDGPPRTDLTIVLCRSPFFERPSPGCFIEEEPRGSSTGYDHREDDFVLYGKPHHRGRSGRKTSRHAKVATEEDSSSGGFSGLEEVEGKETHPKTSADVSSLEEEGARDTPDEDRDTPKEDRDTPKEDRDTPKEDGVAPKEVMAPIPEPKETPTKEKPHSPRVSILGPPHTLRPPCKETEVCDQTTSPILPPSPAQSRAEEVKIPAASSNPFLASVLPSCMRKPPTLEECEAVIRQLWNINHMQMQELMYLRSCLDDIYRTRRIPEDYMLAGHIGNSQTTRLPRMKNAPKQCRLLNPLPAAERSVLPALKQTLGNTFAERQKRAQAIQRKRLNRPAY
SIO_010081: LOC121916978
subclass of: SO_0000673
so part of: LOC121916978
location: join(2248211..2248427,2249408..2249522,2250428..2250567,2251506..2251604,2252104..2252347,2253023..2253284,2253375..2253457,2253589..2253639,2253959..2254097)
location: region:2248211-2254097:1
so has part: feature:2248211-2248427:1:exon
so has part: feature:2249408-2249522:1:exon
so has part: feature:2250428-2250567:1:exon
so has part: feature:2251506-2251604:1:exon
so has part: feature:2252104-2252347:1:exon
so has part: feature:2253023-2253284:1:exon
so has part: feature:2253375-2253457:1:exon
so has part: feature:2253589-2253639:1:exon
so has part: feature:2253959-2254097:1:exon

XP_042298505.1
type: Protein
SIO_000068: ncbiprotein

position:2254097:1
position: 2254097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2248211-2248427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2249408-2249522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2250428-2250567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2251506-2251604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2252104-2252347:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2253023-2253284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2253375-2253457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2253589-2253639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2253959-2254097:1:exon

LOC121916979
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2256934..2271117
location: region:2256934-2271117:1
so has part: feature:2256934-2271117:1:exon
subclass of: SO_0000010

121916979
type: Gene
SIO_000068: ncbigene

position:2256934:1
position: 2256934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271117:1
position: 2271117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2256934-2271117:1:exon

LOC121916979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916979
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_042442572.1
SIO_010081: LOC121916979
subclass of: SO_0000673
so part of: LOC121916979
location: join(2256934..2257766,2263061..2263205,2264707..2264901,2266438..2266609,2267280..2267479,2270363..2270573,2270973..2271117)
location: region:2256934-2271117:1
so has part: feature:2256934-2257766:1:exon
so has part: feature:2263061-2263205:1:exon
so has part: feature:2264707-2264901:1:exon
so has part: feature:2266438-2266609:1:exon
so has part: feature:2267280-2267479:1:exon
so has part: feature:2270363-2270573:1:exon
so has part: feature:2270973-2271117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2256934-2257766:1:exon

position:2257766:1
position: 2257766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2263061-2263205:1:exon

position:2263061:1
position: 2263061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263205:1
position: 2263205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2264707-2264901:1:exon

position:2264707:1
position: 2264707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264901:1
position: 2264901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2266438-2266609:1:exon

position:2266438:1
position: 2266438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2266609:1
position: 2266609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2267280-2267479:1:exon

position:2267280:1
position: 2267280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267479:1
position: 2267479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2270363-2270573:1:exon

position:2270363:1
position: 2270363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2270573:1
position: 2270573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2270973-2271117:1:exon

position:2270973:1
position: 2270973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121916979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like
translation: MGNVGSHSEGEEEEEEEGEEAAAARRRSTGGTAAASAGGGREGSGAEPPAPGAMASSSSSSPPSAPSPPPLSSSSSLPSSSVLLGQARLREEAAARLREAPAAASEPLLSRHHAALVRWLEERLGRGESSVSLEQLCEALETRTAASAAGGGAGAGGTTTSANASGQGAASAPVSEERARSEEAFAQFDAEGDGTVDVENMLEILKSSSGANLQGELSHVIRQLQACSLVPGFIDIFSESNERLSLHASMILRFLHRHRIASTVIPYPVLEYFNNICTMRSSVLKDSLDRLLLKEKECPSDLNGNQELDKFKSVSKCYTHIETSSNSADVDKMTNGETSSFWQSDGSARSHWIRLKMKPDVILRHLSIAVAANDQSYMPQQVTVAVGRTASNLQEVRDVHIPSNVTGYVTLLENANISQMYVQINIKRCLSDGCDTRIHGLRAIGYQRVKKGGVSVCDASAIWYWSLLTSLITASMETNPAIVHAILQNTQKALQHMPPLSLSPGSTDFSSFLSPNVLEEVDNFLLGIARYGCNGATA
SIO_010081: LOC121916979
subclass of: SO_0000673
so part of: LOC121916979
location: join(2257218..2257766,2263061..2263205,2264707..2264901,2266438..2266609,2267280..2267479,2270363..2270573,2270973..2271117)
location: region:2257218-2271117:1
so has part: feature:2257218-2257766:1:exon
so has part: feature:2263061-2263205:1:exon
so has part: feature:2264707-2264901:1:exon
so has part: feature:2266438-2266609:1:exon
so has part: feature:2267280-2267479:1:exon
so has part: feature:2270363-2270573:1:exon
so has part: feature:2270973-2271117:1:exon

XP_042298506.1
type: Protein
SIO_000068: ncbiprotein

position:2257218:1
position: 2257218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2257218-2257766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2263061-2263205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2264707-2264901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2266438-2266609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2267280-2267479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2270363-2270573:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2270973-2271117:1:exon

LOC121917153
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2297248..2301579)
location: region:2297248-2301579:-1
so has part: feature:2297248-2301579:-1:exon
subclass of: SO_0000010

121917153
type: Gene
SIO_000068: ncbigene

position:2297248:-1
position: 2297248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2301579:-1
position: 2301579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2297248-2301579:-1:exon

LOC121917153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917153
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_042442885.1
SIO_010081: LOC121917153
subclass of: SO_0000673
so part of: LOC121917153
location: complement(join(2297248..2297354,2297472..2297687,2297906..2298017,2298442..2298590,2299910..2300001,2300235..2300333,2301400..2301579))
location: region:2297248-2301579:-1
so has part: feature:2301400-2301579:-1:exon
so has part: feature:2300235-2300333:-1:exon
so has part: feature:2299910-2300001:-1:exon
so has part: feature:2298442-2298590:-1:exon
so has part: feature:2297906-2298017:-1:exon
so has part: feature:2297472-2297687:-1:exon
so has part: feature:2297248-2297354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2301400-2301579:-1:exon

position:2301400:-1
position: 2301400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2300235-2300333:-1:exon

position:2300235:-1
position: 2300235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2300333:-1
position: 2300333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2299910-2300001:-1:exon

position:2299910:-1
position: 2299910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2300001:-1
position: 2300001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2298442-2298590:-1:exon

position:2298442:-1
position: 2298442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2298590:-1
position: 2298590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2297906-2298017:-1:exon

position:2297906:-1
position: 2297906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2298017:-1
position: 2298017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2297472-2297687:-1:exon

position:2297472:-1
position: 2297472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2297687:-1
position: 2297687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2297248-2297354:-1:exon

position:2297354:-1
position: 2297354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121917153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like
translation: MATVRQNLLYKYGAPLRLTLQACDVKGKEDKSGPENLLVEPWTGDGFLTETGKRRASVILSSGTDMALQVTQIRIKVRRGAIGARCGLVFAYNCSSEKFHAEEHFKRFESYDKWKLEDFRQFVKTRSGTSHDELGEEDPVGWFEMEEEWDEVEVKMQQCRIAKYLMVKFLCTRQDKAERLGVQGLAIFGYLRPASSEPNRSKSCMECDKADGDTVCGMTLLLKTLSFIQQLAQDMVQKKESGLRYRSYLDFSGLDLKLFWNFYSKLHEK
SIO_010081: LOC121917153
subclass of: SO_0000673
so part of: LOC121917153
location: complement(join(2297250..2297354,2297472..2297687,2297906..2298017,2298442..2298590,2299910..2300001,2300235..2300333,2301400..2301436))
location: region:2297250-2301436:-1
so has part: feature:2301400-2301436:-1:exon
so has part: feature:2300235-2300333:-1:exon
so has part: feature:2299910-2300001:-1:exon
so has part: feature:2298442-2298590:-1:exon
so has part: feature:2297906-2298017:-1:exon
so has part: feature:2297472-2297687:-1:exon
so has part: feature:2297250-2297354:-1:exon

XP_042298819.1
type: Protein
SIO_000068: ncbiprotein

position:2297250:-1
position: 2297250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2301436:-1
position: 2301436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2301400-2301436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2300235-2300333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2299910-2300001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2298442-2298590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2297906-2298017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2297472-2297687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2297250-2297354:-1:exon

LOC121917145
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2305622..2347290
location: region:2305622-2347290:1
so has part: feature:2305622-2347290:1:exon
subclass of: SO_0000010

121917145
type: Gene
SIO_000068: ncbigene

position:2305622:1
position: 2305622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347290:1
position: 2347290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2305622-2347290:1:exon

LOC121917145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917145
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442868.1
SIO_010081: LOC121917145
subclass of: SO_0000673
so part of: LOC121917145
location: join(2305622..2305789,2306561..2306642,2307031..2307232,2308283..2308431,2308670..2308910,2310605..2310684,2312021..2312114,2312502..2313006,2313153..2313317,2314833..2314952,2315908..2316069,2318522..2318651,2319212..2319350,2321331..2321496,2321753..2322015,2323358..2323524,2323692..2323863,2324003..2324139,2325268..2325545,2327094..2327268,2327734..2327866,2328628..2328824,2329330..2329449,2330157..2330336,2331066..2331166,2332589..2332724,2334342..2334701,2335608..2335751,2338173..2338341,2339084..2339182,2340034..2340199,2340582..2340732,2341491..2341562,2344412..2347290)
location: region:2305622-2347290:1
so has part: feature:2305622-2305789:1:exon
so has part: feature:2306561-2306642:1:exon
so has part: feature:2307031-2307232:1:exon
so has part: feature:2308283-2308431:1:exon
so has part: feature:2308670-2308910:1:exon
so has part: feature:2310605-2310684:1:exon
so has part: feature:2312021-2312114:1:exon
so has part: feature:2312502-2313006:1:exon
so has part: feature:2313153-2313317:1:exon
so has part: feature:2314833-2314952:1:exon
so has part: feature:2315908-2316069:1:exon
so has part: feature:2318522-2318651:1:exon
so has part: feature:2319212-2319350:1:exon
so has part: feature:2321331-2321496:1:exon
so has part: feature:2321753-2322015:1:exon
so has part: feature:2323358-2323524:1:exon
so has part: feature:2323692-2323863:1:exon
so has part: feature:2324003-2324139:1:exon
so has part: feature:2325268-2325545:1:exon
so has part: feature:2327094-2327268:1:exon
so has part: feature:2327734-2327866:1:exon
so has part: feature:2328628-2328824:1:exon
so has part: feature:2329330-2329449:1:exon
so has part: feature:2330157-2330336:1:exon
so has part: feature:2331066-2331166:1:exon
so has part: feature:2332589-2332724:1:exon
so has part: feature:2334342-2334701:1:exon
so has part: feature:2335608-2335751:1:exon
so has part: feature:2338173-2338341:1:exon
so has part: feature:2339084-2339182:1:exon
so has part: feature:2340034-2340199:1:exon
so has part: feature:2340582-2340732:1:exon
so has part: feature:2341491-2341562:1:exon
so has part: feature:2344412-2347290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2305622-2305789:1:exon

position:2305789:1
position: 2305789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2306561-2306642:1:exon

position:2306561:1
position: 2306561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2306642:1
position: 2306642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2307031-2307232:1:exon

position:2307031:1
position: 2307031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2307232:1
position: 2307232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2308283-2308431:1:exon

position:2308283:1
position: 2308283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308431:1
position: 2308431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2308670-2308910:1:exon

position:2308670:1
position: 2308670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308910:1
position: 2308910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2310605-2310684:1:exon

position:2310605:1
position: 2310605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310684:1
position: 2310684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2312021-2312114:1:exon

position:2312021:1
position: 2312021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312114:1
position: 2312114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2312502-2313006:1:exon

position:2312502:1
position: 2312502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313006:1
position: 2313006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2313153-2313317:1:exon

position:2313153:1
position: 2313153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313317:1
position: 2313317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2314833-2314952:1:exon

position:2314833:1
position: 2314833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314952:1
position: 2314952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2315908-2316069:1:exon

position:2315908:1
position: 2315908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2316069:1
position: 2316069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2318522-2318651:1:exon

position:2318522:1
position: 2318522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2318651:1
position: 2318651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2319212-2319350:1:exon

position:2319212:1
position: 2319212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2319350:1
position: 2319350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2321331-2321496:1:exon

position:2321331:1
position: 2321331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2321496:1
position: 2321496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2321753-2322015:1:exon

position:2321753:1
position: 2321753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2322015:1
position: 2322015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2323358-2323524:1:exon

position:2323358:1
position: 2323358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323524:1
position: 2323524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2323692-2323863:1:exon

position:2323692:1
position: 2323692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323863:1
position: 2323863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2324003-2324139:1:exon

position:2324003:1
position: 2324003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2324139:1
position: 2324139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2325268-2325545:1:exon

position:2325268:1
position: 2325268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2325545:1
position: 2325545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2327094-2327268:1:exon

position:2327094:1
position: 2327094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2327268:1
position: 2327268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2327734-2327866:1:exon

position:2327734:1
position: 2327734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2327866:1
position: 2327866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2328628-2328824:1:exon

position:2328628:1
position: 2328628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2328824:1
position: 2328824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2329330-2329449:1:exon

position:2329330:1
position: 2329330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2329449:1
position: 2329449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2330157-2330336:1:exon

position:2330157:1
position: 2330157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2330336:1
position: 2330336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2331066-2331166:1:exon

position:2331066:1
position: 2331066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331166:1
position: 2331166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2332589-2332724:1:exon

position:2332589:1
position: 2332589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2332724:1
position: 2332724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2334342-2334701:1:exon

position:2334342:1
position: 2334342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334701:1
position: 2334701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2335608-2335751:1:exon

position:2335608:1
position: 2335608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335751:1
position: 2335751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2338173-2338341:1:exon

position:2338173:1
position: 2338173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338341:1
position: 2338341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2339084-2339182:1:exon

position:2339084:1
position: 2339084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339182:1
position: 2339182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2340034-2340199:1:exon

position:2340034:1
position: 2340034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340199:1
position: 2340199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2340582-2340732:1:exon

position:2340582:1
position: 2340582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340732:1
position: 2340732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2341491-2341562:1:exon

position:2341491:1
position: 2341491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2341562:1
position: 2341562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2344412-2347290:1:exon

position:2344412:1
position: 2344412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121917145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917145
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442870.1
SIO_010081: LOC121917145
subclass of: SO_0000673
so part of: LOC121917145
location: join(2305622..2305789,2306561..2306642,2307031..2307232,2308283..2308431,2308670..2308910,2310605..2310684,2312021..2312114,2312502..2313006,2313153..2313317,2314833..2314952,2315908..2316069,2318522..2318651,2319212..2319350,2321331..2321496,2321753..2322015,2323445..2323524,2323692..2323863,2324003..2324139,2325268..2325545,2327094..2327268,2327734..2327866,2328628..2328824,2329330..2329449,2330157..2330336,2331066..2331166,2332589..2332724,2334342..2334701,2335608..2335751,2338173..2338341,2339084..2339182,2340034..2340199,2340582..2340732,2341491..2341562,2344412..2347290)
location: region:2305622-2347290:1
so has part: feature:2305622-2305789:1:exon
so has part: feature:2306561-2306642:1:exon
so has part: feature:2307031-2307232:1:exon
so has part: feature:2308283-2308431:1:exon
so has part: feature:2308670-2308910:1:exon
so has part: feature:2310605-2310684:1:exon
so has part: feature:2312021-2312114:1:exon
so has part: feature:2312502-2313006:1:exon
so has part: feature:2313153-2313317:1:exon
so has part: feature:2314833-2314952:1:exon
so has part: feature:2315908-2316069:1:exon
so has part: feature:2318522-2318651:1:exon
so has part: feature:2319212-2319350:1:exon
so has part: feature:2321331-2321496:1:exon
so has part: feature:2321753-2322015:1:exon
so has part: feature:2323445-2323524:1:exon
so has part: feature:2323692-2323863:1:exon
so has part: feature:2324003-2324139:1:exon
so has part: feature:2325268-2325545:1:exon
so has part: feature:2327094-2327268:1:exon
so has part: feature:2327734-2327866:1:exon
so has part: feature:2328628-2328824:1:exon
so has part: feature:2329330-2329449:1:exon
so has part: feature:2330157-2330336:1:exon
so has part: feature:2331066-2331166:1:exon
so has part: feature:2332589-2332724:1:exon
so has part: feature:2334342-2334701:1:exon
so has part: feature:2335608-2335751:1:exon
so has part: feature:2338173-2338341:1:exon
so has part: feature:2339084-2339182:1:exon
so has part: feature:2340034-2340199:1:exon
so has part: feature:2340582-2340732:1:exon
so has part: feature:2341491-2341562:1:exon
so has part: feature:2344412-2347290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2305622-2305789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2306561-2306642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2307031-2307232:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2308283-2308431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2308670-2308910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2310605-2310684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2312021-2312114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312502-2313006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2313153-2313317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2314833-2314952:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2315908-2316069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2318522-2318651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2319212-2319350:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2321331-2321496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2321753-2322015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2323445-2323524:1:exon

position:2323445:1
position: 2323445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2323692-2323863:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2324003-2324139:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2325268-2325545:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2327094-2327268:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2327734-2327866:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2328628-2328824:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2329330-2329449:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2330157-2330336:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2331066-2331166:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2332589-2332724:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2334342-2334701:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2335608-2335751:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2338173-2338341:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2339084-2339182:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2340034-2340199:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2340582-2340732:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2341491-2341562:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2344412-2347290:1:exon

LOC121917145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like isoform X1
translation: MGLDSWQQEQPVVLRTWAAESPHNYDNNCHDVTVFLCPGATYFEVEFDERCETERRYDYLEFTDSKGGKTRYDTKVGTDKWPKKVTFKAGPWLQFLFHSDSSNNEWGYKFSVTAYGLPDVDVSWSLDLHLLVARLMGRLASQSMMLKSPREAGTEVELPPAKVTAVLNSPLWKPVFRHQMRSEQNLRECELKKAQMEDKEAVSSDASDCHKFLHDFSKSDPAEEFSGPNSELFKGLTQACKKQAPKTDIVAGSTVDQAVQSTFAALVYLSPDLFEKLQKYVNSGGKTPLSEEFAQVYSLADGIRIWMLEMKQKFLMRQGSDGEEKLGGEMGDVNPETLAQQCIQKSLLLLSFLPARTKREGLASENGEDSRRCHKEKRQRTSSIVEADFQASDSTPSFGATSFVFPVAGQGRDAESKQKQAPESPQTELHPSASHSKPLDGTPPEQEDALSPPSTPTRKPPFNRGRLRLLSFRSMEESKPAPSIKEKYPILKHVLDFIKDQSLSHESVLRVLALRKAQAKNILEVLKMILQCLESLGQPHCFVPPCIIFLLELLACQKDFTTYFAHLEGCGAELHREIRESYYQLLLFLVNALKGFHSLNDKSLLPALSCVQTSFLHLLDMGWEPSDLSFFVDIQLPRLLLAMSRENISTHDSVVCQRSEEEETADYKQNSEWMDECQEGVFESWCDKISQADAEKQRKMHMFIARYCDLLHVDISCDGCDEIAPWHRYRCLQCNDMDLCKTCFLGGVRPEGHEANHDMVNMEYSCDHCQGIIVGQRVHCNVCEDFDLCFGCYSAKKYSDSHLPTHSITVYPMVTVRISDRHRLIQPYLHNYSWLLFSALALYSGDLASGEQTDGEALNPQVVTHARTLQQEYIQLIRDCLIKVQHGKGLKSLALLSMLLEGESLSENVTPSVDYSTDSTAESFANKDAAENITTKPAPFLHCNGNGDANEIQDTVTNGEYKRKAVNKASNGLPLKKVAESQEKEPLATDSDLLAKSPMSPDAGVADGLPPNQVAEKAAPTQEEIFAECSQKRILGLLAAMLPRLKSGFTMSLINLDQILPLLFQVVISNAGHLNETYHLTLGLLGQLIRRLTPAEVDAAVTKVLSAKHSLVAAGDGSTVPEGWKTTHLLFSLGAVCLDSRLGLDWACTMADILRALNASPQWHSVISAFTEHCVKQLPFQLKHTNIFTLLVLVGFPEVLCTGTRSVYMDNANEAHNVVILKHFTEKNRAVVVDVKTRKRKAVKDLQLVQPCGPDNGESQSQLRQYLQHFVFITSHLLQTSMDGSFPEAVEATWVLSLALKGLYKTLKTHAFEEIRTAFLQTALLKLLVKKCSKGTGFSKTWLLRDLEILSIMLYSSKKEMSSLAEHKDAERDQDEGIDQSAITPTDADQNRLDPLEGLDETTKICFLMTHDALDAPLHILRAMYELQMKRRDSFFLEVQKRFDGDVVTTDERIRTLAQKWQPSKRLRSEEQSSKALDTDMIIVPCLSKPAPCSKATEESNPVTQKLITNTESDLQLSYAKQRRTKSSVLLHKELDTRSKKAVRGYLYRINEATAVLYARHVLALLLAEWPDDVAISEEMLELSGPAHMTYILDMLLQLEEKQLCEKILLKVLRGCNESMLATMALTACQFMEEPGMAVQTRESKHPYNNNTNFEDKVHIPGAIYLSVKFDPQCNTEEGCDELVIASSCDFIHDRHTFSGPPHKWTDFELPGDTLYYRFTSDMSNTEWGYKFTVTAGHLGRFQTGFEILKQMLLEERVIPHIPLAKVWEWQVGVACRQTGHQRLKAIHLLLKIVQCCSERDCDLTLLKPLWHLFSCMENNVHHDVAKPGILLPLHQALTELFFVTESKVSELGSLQDYLLALNTEDHLHRCTAQALKNIAAISLAINYPNKSTSPWTV
SIO_010081: LOC121917145
subclass of: SO_0000673
so part of: LOC121917145
location: join(2305623..2305789,2306561..2306642,2307031..2307232,2308283..2308431,2308670..2308910,2310605..2310684,2312021..2312114,2312502..2313006,2313153..2313317,2314833..2314952,2315908..2316069,2318522..2318651,2319212..2319350,2321331..2321496,2321753..2322015,2323358..2323524,2323692..2323863,2324003..2324139,2325268..2325545,2327094..2327268,2327734..2327866,2328628..2328824,2329330..2329449,2330157..2330336,2331066..2331166,2332589..2332724,2334342..2334701,2335608..2335751,2338173..2338341,2339084..2339182,2340034..2340199,2340582..2340732,2341491..2341562,2344412..2344486)
location: region:2305623-2344486:1
so has part: feature:2305623-2305789:1:exon
so has part: feature:2306561-2306642:1:exon
so has part: feature:2307031-2307232:1:exon
so has part: feature:2308283-2308431:1:exon
so has part: feature:2308670-2308910:1:exon
so has part: feature:2310605-2310684:1:exon
so has part: feature:2312021-2312114:1:exon
so has part: feature:2312502-2313006:1:exon
so has part: feature:2313153-2313317:1:exon
so has part: feature:2314833-2314952:1:exon
so has part: feature:2315908-2316069:1:exon
so has part: feature:2318522-2318651:1:exon
so has part: feature:2319212-2319350:1:exon
so has part: feature:2321331-2321496:1:exon
so has part: feature:2321753-2322015:1:exon
so has part: feature:2323358-2323524:1:exon
so has part: feature:2323692-2323863:1:exon
so has part: feature:2324003-2324139:1:exon
so has part: feature:2325268-2325545:1:exon
so has part: feature:2327094-2327268:1:exon
so has part: feature:2327734-2327866:1:exon
so has part: feature:2328628-2328824:1:exon
so has part: feature:2329330-2329449:1:exon
so has part: feature:2330157-2330336:1:exon
so has part: feature:2331066-2331166:1:exon
so has part: feature:2332589-2332724:1:exon
so has part: feature:2334342-2334701:1:exon
so has part: feature:2335608-2335751:1:exon
so has part: feature:2338173-2338341:1:exon
so has part: feature:2339084-2339182:1:exon
so has part: feature:2340034-2340199:1:exon
so has part: feature:2340582-2340732:1:exon
so has part: feature:2341491-2341562:1:exon
so has part: feature:2344412-2344486:1:exon

XP_042298802.1
type: Protein
SIO_000068: ncbiprotein

position:2305623:1
position: 2305623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344486:1
position: 2344486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2305623-2305789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2306561-2306642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2307031-2307232:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2308283-2308431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2308670-2308910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2310605-2310684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2312021-2312114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312502-2313006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2313153-2313317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2314833-2314952:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2315908-2316069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2318522-2318651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2319212-2319350:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2321331-2321496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2321753-2322015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2323358-2323524:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2323692-2323863:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2324003-2324139:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2325268-2325545:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2327094-2327268:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2327734-2327866:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2328628-2328824:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2329330-2329449:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2330157-2330336:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2331066-2331166:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2332589-2332724:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2334342-2334701:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2335608-2335751:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2338173-2338341:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2339084-2339182:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2340034-2340199:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2340582-2340732:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2341491-2341562:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2344412-2344486:1:exon

LOC121917145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like isoform X2
translation: MGLDSWQQEQPVVLRTWAAESPHNYDNNCHDVTVFLCPGATYFEVEFDERCETERRYDYLEFTDSKGGKTRYDTKVGTDKWPKKVTFKAGPWLQFLFHSDSSNNEWGYKFSVTAYGLPDVDVSWSLDLHLLVARLMGRLASQSMMLKSPREAGTEVELPPAKVTAVLNSPLWKPVFRHQMRSEQNLRECELKKAQMEDKEAVSSDASDCHKFLHDFSKSDPAEEFSGPNSELFKGLTQACKKQAPKTDIVAGSTVDQAVQSTFAALVYLSPDLFEKLQKYVNSGGKTPLSEEFAQVYSLADGIRIWMLEMKQKFLMRQGSDGEEKLGGEMGDVNPETLAQQCIQKSLLLLSFLPARTKREGLASENGEDSRRCHKEKRQRTSSIVEADFQASDSTPSFGATSFVFPVAGQGRDAESKQKQAPESPQTELHPSASHSKPLDGTPPEQEDALSPPSTPTRKPPFNRGRLRLLSFRSMEESKPAPSIKEKYPILKHVLDFIKDQSLSHESVLRVLALRKAQAKNILEVLKMILQCLESLGQPHCFVPPCIIFLLELLACQKDFTTYFAHLEGCGAELHREIRESYYQLLLFLVNALKGFHSLNDKSLLPALSCVQTSFLHLLDMGWEPSDLSFFVDIQLPRLLLAMSRENISTHDSVVCQRSEEEETADYKQNSEWMDECQEGVFESWCDKISQADAEKQRKMHMFIARYCDLLHVDISCDGCDEIAPWHRYRCLQCNDMDLCKTCFLGGVRPEGHEANHDMVNMEYSCDHCQGIIVGQRVHCNVCEDFDLCFGCYSAKKYSDSHLPTHSITVYPMVTVRISDRHRLIQPYLHNYSWLLFSALALYSGDLASGEQTDGEALNPQVVTHARTLQQEYIQLIRDCLIKVQHGKDSTAESFANKDAAENITTKPAPFLHCNGNGDANEIQDTVTNGEYKRKAVNKASNGLPLKKVAESQEKEPLATDSDLLAKSPMSPDAGVADGLPPNQVAEKAAPTQEEIFAECSQKRILGLLAAMLPRLKSGFTMSLINLDQILPLLFQVVISNAGHLNETYHLTLGLLGQLIRRLTPAEVDAAVTKVLSAKHSLVAAGDGSTVPEGWKTTHLLFSLGAVCLDSRLGLDWACTMADILRALNASPQWHSVISAFTEHCVKQLPFQLKHTNIFTLLVLVGFPEVLCTGTRSVYMDNANEAHNVVILKHFTEKNRAVVVDVKTRKRKAVKDLQLVQPCGPDNGESQSQLRQYLQHFVFITSHLLQTSMDGSFPEAVEATWVLSLALKGLYKTLKTHAFEEIRTAFLQTALLKLLVKKCSKGTGFSKTWLLRDLEILSIMLYSSKKEMSSLAEHKDAERDQDEGIDQSAITPTDADQNRLDPLEGLDETTKICFLMTHDALDAPLHILRAMYELQMKRRDSFFLEVQKRFDGDVVTTDERIRTLAQKWQPSKRLRSEEQSSKALDTDMIIVPCLSKPAPCSKATEESNPVTQKLITNTESDLQLSYAKQRRTKSSVLLHKELDTRSKKAVRGYLYRINEATAVLYARHVLALLLAEWPDDVAISEEMLELSGPAHMTYILDMLLQLEEKQLCEKILLKVLRGCNESMLATMALTACQFMEEPGMAVQTRESKHPYNNNTNFEDKVHIPGAIYLSVKFDPQCNTEEGCDELVIASSCDFIHDRHTFSGPPHKWTDFELPGDTLYYRFTSDMSNTEWGYKFTVTAGHLGRFQTGFEILKQMLLEERVIPHIPLAKVWEWQVGVACRQTGHQRLKAIHLLLKIVQCCSERDCDLTLLKPLWHLFSCMENNVHHDVAKPGILLPLHQALTELFFVTESKVSELGSLQDYLLALNTEDHLHRCTAQALKNIAAISLAINYPNKSTSPWTV
SIO_010081: LOC121917145
subclass of: SO_0000673
so part of: LOC121917145
location: join(2305623..2305789,2306561..2306642,2307031..2307232,2308283..2308431,2308670..2308910,2310605..2310684,2312021..2312114,2312502..2313006,2313153..2313317,2314833..2314952,2315908..2316069,2318522..2318651,2319212..2319350,2321331..2321496,2321753..2322015,2323445..2323524,2323692..2323863,2324003..2324139,2325268..2325545,2327094..2327268,2327734..2327866,2328628..2328824,2329330..2329449,2330157..2330336,2331066..2331166,2332589..2332724,2334342..2334701,2335608..2335751,2338173..2338341,2339084..2339182,2340034..2340199,2340582..2340732,2341491..2341562,2344412..2344486)
location: region:2305623-2344486:1
so has part: feature:2305623-2305789:1:exon
so has part: feature:2306561-2306642:1:exon
so has part: feature:2307031-2307232:1:exon
so has part: feature:2308283-2308431:1:exon
so has part: feature:2308670-2308910:1:exon
so has part: feature:2310605-2310684:1:exon
so has part: feature:2312021-2312114:1:exon
so has part: feature:2312502-2313006:1:exon
so has part: feature:2313153-2313317:1:exon
so has part: feature:2314833-2314952:1:exon
so has part: feature:2315908-2316069:1:exon
so has part: feature:2318522-2318651:1:exon
so has part: feature:2319212-2319350:1:exon
so has part: feature:2321331-2321496:1:exon
so has part: feature:2321753-2322015:1:exon
so has part: feature:2323445-2323524:1:exon
so has part: feature:2323692-2323863:1:exon
so has part: feature:2324003-2324139:1:exon
so has part: feature:2325268-2325545:1:exon
so has part: feature:2327094-2327268:1:exon
so has part: feature:2327734-2327866:1:exon
so has part: feature:2328628-2328824:1:exon
so has part: feature:2329330-2329449:1:exon
so has part: feature:2330157-2330336:1:exon
so has part: feature:2331066-2331166:1:exon
so has part: feature:2332589-2332724:1:exon
so has part: feature:2334342-2334701:1:exon
so has part: feature:2335608-2335751:1:exon
so has part: feature:2338173-2338341:1:exon
so has part: feature:2339084-2339182:1:exon
so has part: feature:2340034-2340199:1:exon
so has part: feature:2340582-2340732:1:exon
so has part: feature:2341491-2341562:1:exon
so has part: feature:2344412-2344486:1:exon

XP_042298804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2305623-2305789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2306561-2306642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2307031-2307232:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2308283-2308431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2308670-2308910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2310605-2310684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2312021-2312114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312502-2313006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2313153-2313317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2314833-2314952:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2315908-2316069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2318522-2318651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2319212-2319350:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2321331-2321496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2321753-2322015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2323445-2323524:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2323692-2323863:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2324003-2324139:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2325268-2325545:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2327094-2327268:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2327734-2327866:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2328628-2328824:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2329330-2329449:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2330157-2330336:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2331066-2331166:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2332589-2332724:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2334342-2334701:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2335608-2335751:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2338173-2338341:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2339084-2339182:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2340034-2340199:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2340582-2340732:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2341491-2341562:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2344412-2344486:1:exon

LOC121917145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917145
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442871.1
SIO_010081: LOC121917145
subclass of: SO_0000673
so part of: LOC121917145
location: join(2308892..2308910,2310605..2310684,2312025..2312114,2312502..2313006,2313153..2313317,2314833..2314952,2315908..2316069,2318522..2318651,2319212..2319350,2321331..2321496,2321753..2322015,2323358..2323524,2323692..2323863,2324003..2324139,2325268..2325545,2327094..2327268,2327734..2327866,2328628..2328824,2329330..2329449,2330157..2330336,2331066..2331166,2332589..2332724,2334342..2334701,2335608..2335751,2338173..2338341,2339084..2339182,2340034..2340199,2340582..2340732,2341491..2341562,2344412..2347290)
location: region:2308892-2347290:1
so has part: feature:2308892-2308910:1:exon
so has part: feature:2310605-2310684:1:exon
so has part: feature:2312025-2312114:1:exon
so has part: feature:2312502-2313006:1:exon
so has part: feature:2313153-2313317:1:exon
so has part: feature:2314833-2314952:1:exon
so has part: feature:2315908-2316069:1:exon
so has part: feature:2318522-2318651:1:exon
so has part: feature:2319212-2319350:1:exon
so has part: feature:2321331-2321496:1:exon
so has part: feature:2321753-2322015:1:exon
so has part: feature:2323358-2323524:1:exon
so has part: feature:2323692-2323863:1:exon
so has part: feature:2324003-2324139:1:exon
so has part: feature:2325268-2325545:1:exon
so has part: feature:2327094-2327268:1:exon
so has part: feature:2327734-2327866:1:exon
so has part: feature:2328628-2328824:1:exon
so has part: feature:2329330-2329449:1:exon
so has part: feature:2330157-2330336:1:exon
so has part: feature:2331066-2331166:1:exon
so has part: feature:2332589-2332724:1:exon
so has part: feature:2334342-2334701:1:exon
so has part: feature:2335608-2335751:1:exon
so has part: feature:2338173-2338341:1:exon
so has part: feature:2339084-2339182:1:exon
so has part: feature:2340034-2340199:1:exon
so has part: feature:2340582-2340732:1:exon
so has part: feature:2341491-2341562:1:exon
so has part: feature:2344412-2347290:1:exon

position:2308892:1
position: 2308892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2308892-2308910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310605-2310684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2312025-2312114:1:exon

position:2312025:1
position: 2312025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2312502-2313006:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2313153-2313317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2314833-2314952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2315908-2316069:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2318522-2318651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2319212-2319350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2321331-2321496:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2321753-2322015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2323358-2323524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2323692-2323863:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2324003-2324139:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2325268-2325545:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2327094-2327268:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2327734-2327866:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2328628-2328824:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2329330-2329449:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2330157-2330336:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2331066-2331166:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2332589-2332724:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2334342-2334701:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2335608-2335751:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2338173-2338341:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2339084-2339182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2340034-2340199:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2340582-2340732:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2341491-2341562:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2344412-2347290:1:exon

LOC121917145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1-like isoform X3
translation: MDEMKQKFLMRQGSDGEEKLGGEMGDVNPETLAQQCIQKSLLLLSFLPARTKREGLASENGEDSRRCHKEKRQRTSSIVEADFQASDSTPSFGATSFVFPVAGQGRDAESKQKQAPESPQTELHPSASHSKPLDGTPPEQEDALSPPSTPTRKPPFNRGRLRLLSFRSMEESKPAPSIKEKYPILKHVLDFIKDQSLSHESVLRVLALRKAQAKNILEVLKMILQCLESLGQPHCFVPPCIIFLLELLACQKDFTTYFAHLEGCGAELHREIRESYYQLLLFLVNALKGFHSLNDKSLLPALSCVQTSFLHLLDMGWEPSDLSFFVDIQLPRLLLAMSRENISTHDSVVCQRSEEEETADYKQNSEWMDECQEGVFESWCDKISQADAEKQRKMHMFIARYCDLLHVDISCDGCDEIAPWHRYRCLQCNDMDLCKTCFLGGVRPEGHEANHDMVNMEYSCDHCQGIIVGQRVHCNVCEDFDLCFGCYSAKKYSDSHLPTHSITVYPMVTVRISDRHRLIQPYLHNYSWLLFSALALYSGDLASGEQTDGEALNPQVVTHARTLQQEYIQLIRDCLIKVQHGKGLKSLALLSMLLEGESLSENVTPSVDYSTDSTAESFANKDAAENITTKPAPFLHCNGNGDANEIQDTVTNGEYKRKAVNKASNGLPLKKVAESQEKEPLATDSDLLAKSPMSPDAGVADGLPPNQVAEKAAPTQEEIFAECSQKRILGLLAAMLPRLKSGFTMSLINLDQILPLLFQVVISNAGHLNETYHLTLGLLGQLIRRLTPAEVDAAVTKVLSAKHSLVAAGDGSTVPEGWKTTHLLFSLGAVCLDSRLGLDWACTMADILRALNASPQWHSVISAFTEHCVKQLPFQLKHTNIFTLLVLVGFPEVLCTGTRSVYMDNANEAHNVVILKHFTEKNRAVVVDVKTRKRKAVKDLQLVQPCGPDNGESQSQLRQYLQHFVFITSHLLQTSMDGSFPEAVEATWVLSLALKGLYKTLKTHAFEEIRTAFLQTALLKLLVKKCSKGTGFSKTWLLRDLEILSIMLYSSKKEMSSLAEHKDAERDQDEGIDQSAITPTDADQNRLDPLEGLDETTKICFLMTHDALDAPLHILRAMYELQMKRRDSFFLEVQKRFDGDVVTTDERIRTLAQKWQPSKRLRSEEQSSKALDTDMIIVPCLSKPAPCSKATEESNPVTQKLITNTESDLQLSYAKQRRTKSSVLLHKELDTRSKKAVRGYLYRINEATAVLYARHVLALLLAEWPDDVAISEEMLELSGPAHMTYILDMLLQLEEKQLCEKILLKVLRGCNESMLATMALTACQFMEEPGMAVQTRESKHPYNNNTNFEDKVHIPGAIYLSVKFDPQCNTEEGCDELVIASSCDFIHDRHTFSGPPHKWTDFELPGDTLYYRFTSDMSNTEWGYKFTVTAGHLGRFQTGFEILKQMLLEERVIPHIPLAKVWEWQVGVACRQTGHQRLKAIHLLLKIVQCCSERDCDLTLLKPLWHLFSCMENNVHHDVAKPGILLPLHQALTELFFVTESKVSELGSLQDYLLALNTEDHLHRCTAQALKNIAAISLAINYPNKSTSPWTV
SIO_010081: LOC121917145
subclass of: SO_0000673
so part of: LOC121917145
location: join(2310678..2310684,2312025..2312114,2312502..2313006,2313153..2313317,2314833..2314952,2315908..2316069,2318522..2318651,2319212..2319350,2321331..2321496,2321753..2322015,2323358..2323524,2323692..2323863,2324003..2324139,2325268..2325545,2327094..2327268,2327734..2327866,2328628..2328824,2329330..2329449,2330157..2330336,2331066..2331166,2332589..2332724,2334342..2334701,2335608..2335751,2338173..2338341,2339084..2339182,2340034..2340199,2340582..2340732,2341491..2341562,2344412..2344486)
location: region:2310678-2344486:1
so has part: feature:2310678-2310684:1:exon
so has part: feature:2312025-2312114:1:exon
so has part: feature:2312502-2313006:1:exon
so has part: feature:2313153-2313317:1:exon
so has part: feature:2314833-2314952:1:exon
so has part: feature:2315908-2316069:1:exon
so has part: feature:2318522-2318651:1:exon
so has part: feature:2319212-2319350:1:exon
so has part: feature:2321331-2321496:1:exon
so has part: feature:2321753-2322015:1:exon
so has part: feature:2323358-2323524:1:exon
so has part: feature:2323692-2323863:1:exon
so has part: feature:2324003-2324139:1:exon
so has part: feature:2325268-2325545:1:exon
so has part: feature:2327094-2327268:1:exon
so has part: feature:2327734-2327866:1:exon
so has part: feature:2328628-2328824:1:exon
so has part: feature:2329330-2329449:1:exon
so has part: feature:2330157-2330336:1:exon
so has part: feature:2331066-2331166:1:exon
so has part: feature:2332589-2332724:1:exon
so has part: feature:2334342-2334701:1:exon
so has part: feature:2335608-2335751:1:exon
so has part: feature:2338173-2338341:1:exon
so has part: feature:2339084-2339182:1:exon
so has part: feature:2340034-2340199:1:exon
so has part: feature:2340582-2340732:1:exon
so has part: feature:2341491-2341562:1:exon
so has part: feature:2344412-2344486:1:exon

XP_042298805.1
type: Protein
SIO_000068: ncbiprotein

position:2310678:1
position: 2310678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2310678-2310684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2312025-2312114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2312502-2313006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2313153-2313317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2314833-2314952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2315908-2316069:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2318522-2318651:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2319212-2319350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2321331-2321496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2321753-2322015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2323358-2323524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2323692-2323863:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2324003-2324139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2325268-2325545:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2327094-2327268:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2327734-2327866:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2328628-2328824:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2329330-2329449:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2330157-2330336:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2331066-2331166:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2332589-2332724:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2334342-2334701:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2335608-2335751:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2338173-2338341:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2339084-2339182:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2340034-2340199:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2340582-2340732:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2341491-2341562:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2344412-2344486:1:exon

LOC121917146
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2384591..2462614
location: region:2384591-2462614:1
so has part: feature:2384591-2462614:1:exon
subclass of: SO_0000010

121917146
type: Gene
SIO_000068: ncbigene

position:2384591:1
position: 2384591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2462614:1
position: 2462614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2384591-2462614:1:exon

LOC121917146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917146
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_042442872.1
SIO_010081: LOC121917146
subclass of: SO_0000673
so part of: LOC121917146
location: join(2384591..2384904,2414893..2414910,2415128..2415210,2419379..2419483,2419902..2420040,2420931..2421011,2421448..2421533,2422558..2423022,2441773..2441861,2446574..2446676,2447782..2447913,2448265..2448390,2450085..2450303,2450901..2451236,2452291..2452511,2453499..2453701,2454287..2454372,2455101..2455234,2455550..2455667,2456077..2456194,2459415..2462614)
location: region:2384591-2462614:1
so has part: feature:2384591-2384904:1:exon
so has part: feature:2414893-2414910:1:exon
so has part: feature:2415128-2415210:1:exon
so has part: feature:2419379-2419483:1:exon
so has part: feature:2419902-2420040:1:exon
so has part: feature:2420931-2421011:1:exon
so has part: feature:2421448-2421533:1:exon
so has part: feature:2422558-2423022:1:exon
so has part: feature:2441773-2441861:1:exon
so has part: feature:2446574-2446676:1:exon
so has part: feature:2447782-2447913:1:exon
so has part: feature:2448265-2448390:1:exon
so has part: feature:2450085-2450303:1:exon
so has part: feature:2450901-2451236:1:exon
so has part: feature:2452291-2452511:1:exon
so has part: feature:2453499-2453701:1:exon
so has part: feature:2454287-2454372:1:exon
so has part: feature:2455101-2455234:1:exon
so has part: feature:2455550-2455667:1:exon
so has part: feature:2456077-2456194:1:exon
so has part: feature:2459415-2462614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2384591-2384904:1:exon

position:2384904:1
position: 2384904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2414893-2414910:1:exon

position:2414893:1
position: 2414893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414910:1
position: 2414910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2415128-2415210:1:exon

position:2415128:1
position: 2415128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2415210:1
position: 2415210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2419379-2419483:1:exon

position:2419379:1
position: 2419379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419483:1
position: 2419483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2419902-2420040:1:exon

position:2419902:1
position: 2419902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420040:1
position: 2420040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2420931-2421011:1:exon

position:2420931:1
position: 2420931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421011:1
position: 2421011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2421448-2421533:1:exon

position:2421448:1
position: 2421448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421533:1
position: 2421533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2422558-2423022:1:exon

position:2422558:1
position: 2422558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2423022:1
position: 2423022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2441773-2441861:1:exon

position:2441773:1
position: 2441773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2441861:1
position: 2441861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2446574-2446676:1:exon

position:2446574:1
position: 2446574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2446676:1
position: 2446676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2447782-2447913:1:exon

position:2447782:1
position: 2447782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447913:1
position: 2447913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2448265-2448390:1:exon

position:2448265:1
position: 2448265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448390:1
position: 2448390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2450085-2450303:1:exon

position:2450085:1
position: 2450085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2450303:1
position: 2450303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2450901-2451236:1:exon

position:2450901:1
position: 2450901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451236:1
position: 2451236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2452291-2452511:1:exon

position:2452291:1
position: 2452291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2452511:1
position: 2452511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2453499-2453701:1:exon

position:2453499:1
position: 2453499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453701:1
position: 2453701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2454287-2454372:1:exon

position:2454287:1
position: 2454287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2454372:1
position: 2454372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2455101-2455234:1:exon

position:2455101:1
position: 2455101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455234:1
position: 2455234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2455550-2455667:1:exon

position:2455550:1
position: 2455550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455667:1
position: 2455667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2456077-2456194:1:exon

position:2456077:1
position: 2456077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456194:1
position: 2456194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2459415-2462614:1:exon

position:2459415:1
position: 2459415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121917146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 3
translation: MESAHSSTADQVLRHFGVRESCGLSPEQVRRLREKYGPNELPAEEGKSLLELILEQFEDLLVRILLLAAFVSFILAWFEEGEETTTAFVEPVVIIMILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEIKSTTLRVDQSILTGESVSVIKHTDPIPDPRAVNQDKKNMLFSGTNIAAGKAVGVVIATGVYTEIGKIRNQMVATEPEKTPLQQKLDEFSQQLSKVISLVCIAVWVINISHFSDPVHGGSWFRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVVEKIEGIHCSLHEFTITGSTYTPEGQILKDDLPVQCGKFDGLVELATICALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNVFNTDTSNLSKVERANACNTVIKQLMKKECTLEFSRDRKSMSVYCTPVSKGHNSSSSKLFVKGAPESVIERCNYIRVGSTRVPLTLSTKEKILSKIRDWGTGIDTLRCLALATRDHPPRKEDMRLDDSSQFINYETNLTFVGCVGMLDPPRKEVMSSIEMCKKAGIRVIMITGDNKGTAVAICRRIGIFSENEDVTDRAYTGREFDDLSPEAQSDACRSARCFARVEPAHKSKIVEYLQSFNEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLSDDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKLPRNPREPLISGWLFFRYLAIGVYVGFATVGAATWWFLYDTEGPQVSFYQLRNFMRCTEDNPIFEDVDCQIFESRYPTTMALSVLVTIEMCNALNSVSENQSLLRMPPWLNIWLLGAIVVSMALHFLILYVKPLPLIFQVTPLSWPQWVVVLKISLPVILLDEGLKYLSRNHLDGKEIKA
SIO_010081: LOC121917146
subclass of: SO_0000673
so part of: LOC121917146
location: join(2384787..2384904,2414893..2414910,2415128..2415210,2419379..2419483,2419902..2420040,2420931..2421011,2421448..2421533,2422558..2423022,2441773..2441861,2446574..2446676,2447782..2447913,2448265..2448390,2450085..2450303,2450901..2451236,2452291..2452511,2453499..2453701,2454287..2454372,2455101..2455234,2455550..2455667,2456077..2456194,2459415..2459434)
location: region:2384787-2459434:1
so has part: feature:2384787-2384904:1:exon
so has part: feature:2414893-2414910:1:exon
so has part: feature:2415128-2415210:1:exon
so has part: feature:2419379-2419483:1:exon
so has part: feature:2419902-2420040:1:exon
so has part: feature:2420931-2421011:1:exon
so has part: feature:2421448-2421533:1:exon
so has part: feature:2422558-2423022:1:exon
so has part: feature:2441773-2441861:1:exon
so has part: feature:2446574-2446676:1:exon
so has part: feature:2447782-2447913:1:exon
so has part: feature:2448265-2448390:1:exon
so has part: feature:2450085-2450303:1:exon
so has part: feature:2450901-2451236:1:exon
so has part: feature:2452291-2452511:1:exon
so has part: feature:2453499-2453701:1:exon
so has part: feature:2454287-2454372:1:exon
so has part: feature:2455101-2455234:1:exon
so has part: feature:2455550-2455667:1:exon
so has part: feature:2456077-2456194:1:exon
so has part: feature:2459415-2459434:1:exon

XP_042298806.1
type: Protein
SIO_000068: ncbiprotein

position:2384787:1
position: 2384787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459434:1
position: 2459434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2384787-2384904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2414893-2414910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2415128-2415210:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2419379-2419483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2419902-2420040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2420931-2421011:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2421448-2421533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2422558-2423022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2441773-2441861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2446574-2446676:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2447782-2447913:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2448265-2448390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2450085-2450303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2450901-2451236:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2452291-2452511:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2453499-2453701:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2454287-2454372:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2455101-2455234:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2455550-2455667:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2456077-2456194:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2459415-2459434:1:exon

P2RX1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2464344..2494489
location: region:2464344-2494489:1
so has part: feature:2464344-2494489:1:exon
subclass of: SO_0000010

121917148
type: Gene
SIO_000068: ncbigene

position:2464344:1
position: 2464344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494489:1
position: 2494489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2464344-2494489:1:exon

P2RX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: P2RX1
product: purinergic receptor P2X 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442878.1
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2464344..2464580,2481646..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2491287..2491352,2492107..2492208,2492900..2492969,2493475..2494489)
location: region:2464344-2494489:1
so has part: feature:2464344-2464580:1:exon
so has part: feature:2481646-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2491287-2491352:1:exon
so has part: feature:2492107-2492208:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2494489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2464344-2464580:1:exon

position:2464580:1
position: 2464580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2481646-2481793:1:exon

position:2481646:1
position: 2481646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481793:1
position: 2481793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2482965-2483036:1:exon

position:2482965:1
position: 2482965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483036:1
position: 2483036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2483795-2483864:1:exon

position:2483795:1
position: 2483795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483864:1
position: 2483864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2485391-2485487:1:exon

position:2485391:1
position: 2485391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2485487:1
position: 2485487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2486087-2486167:1:exon

position:2486087:1
position: 2486087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486167:1
position: 2486167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2487148-2487289:1:exon

position:2487148:1
position: 2487148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487289:1
position: 2487289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2488864-2488994:1:exon

position:2488864:1
position: 2488864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488994:1
position: 2488994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2490384-2490474:1:exon

position:2490384:1
position: 2490384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490474:1
position: 2490474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2491287-2491352:1:exon

position:2491287:1
position: 2491287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2491352:1
position: 2491352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2492107-2492208:1:exon

position:2492107:1
position: 2492107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492208:1
position: 2492208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2492900-2492969:1:exon

position:2492900:1
position: 2492900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492969:1
position: 2492969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2493475-2494489:1:exon

position:2493475:1
position: 2493475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

P2RX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: P2RX1
product: purinergic receptor P2X 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442875.1
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2465306..2465332,2470918..2471602,2481646..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2491287..2491352,2492107..2492208,2492900..2492969,2493475..2494489)
location: region:2465306-2494489:1
so has part: feature:2465306-2465332:1:exon
so has part: feature:2470918-2471602:1:exon
so has part: feature:2481646-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2491287-2491352:1:exon
so has part: feature:2492107-2492208:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2494489:1:exon

position:2465306:1
position: 2465306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465306-2465332:1:exon

position:2465332:1
position: 2465332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2470918-2471602:1:exon

position:2470918:1
position: 2470918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471602:1
position: 2471602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2481646-2481793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2482965-2483036:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2483795-2483864:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2485391-2485487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2486087-2486167:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2487148-2487289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2488864-2488994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2490384-2490474:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2491287-2491352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2492107-2492208:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2492900-2492969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2493475-2494489:1:exon

P2RX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: P2RX1
product: purinergic receptor P2X 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042442876.1
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2470768..2471602,2481646..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2492900..2492969,2493475..2494489)
location: region:2470768-2494489:1
so has part: feature:2470768-2471602:1:exon
so has part: feature:2481646-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2494489:1:exon

position:2470768:1
position: 2470768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470768-2471602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2481646-2481793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2482965-2483036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2483795-2483864:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2485391-2485487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2486087-2486167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2487148-2487289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2488864-2488994:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2490384-2490474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2492900-2492969:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2493475-2494489:1:exon

P2RX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 1 isoform X1
translation: MGQKFMETVTSFLFEYDTPRMVLVRNKKVGVTFRLIQLVVLAYIIGWVFLYEKGYQSKDGIISSVSVKLKGLTLTNFSDMGPYIWDVADYVFPPQGDSSFVVMTNFIVTRRQKQETCPEHPDASKCEEDSKCAQGKFLRQGQGIMTGKCVNFSHAQKTCEIYGWCPVEIDDEVPNPPLLLAAENFTLFIKNSITFPKFKVSRRNLVEKITKPYLRNCTYHRVRDPLCPVFELGYVVKESGQTFSVLARKGGVVGITISWDCDLDWPVRYCVPVYQFHGLYNEDNNISPGFNFRHARYYRENGRDLRNLYKVFGIRFDILVNGKAGKFDIIPTMTTIGSGIGIFGVASVVCDVLLLNFLSNRDYYKQKKFKYAQQDTIPPEKEDADSSFMYNLQGKEKGPQGN
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2471466..2471602,2481646..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2491287..2491352,2492107..2492208,2492900..2492969,2493475..2493476)
location: region:2471466-2493476:1
so has part: feature:2471466-2471602:1:exon
so has part: feature:2481646-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2491287-2491352:1:exon
so has part: feature:2492107-2492208:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2493476:1:exon

XP_042298809.1
type: Protein
SIO_000068: ncbiprotein

position:2471466:1
position: 2471466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2493476:1
position: 2493476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2471466-2471602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2481646-2481793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2482965-2483036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2483795-2483864:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2485391-2485487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2486087-2486167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2487148-2487289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2488864-2488994:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2490384-2490474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2491287-2491352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2492107-2492208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2492900-2492969:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2493475-2493476:1:exon

P2RX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 1 isoform X2
translation: MGQKFMETVTSFLFEYDTPRMVLVRNKKVGVTFRLIQLVVLAYIIGWVFLYEKGYQSKDGIISSVSVKLKGLTLTNFSDMGPYIWDVADYVFPPQGDSSFVVMTNFIVTRRQKQETCPEHPDASKCEEDSKCAQGKFLRQGQGIMTGKCVNFSHAQKTCEIYGWCPVEIDDEVPNPPLLLAAENFTLFIKNSITFPKFKVSRRNLVEKITKPYLRNCTYHRVRDPLCPVFELGYVVKESGQTFSVLARKGGVVGITISWDCDLDWPVRYCVPVYQFHGLYNEDNNISPGFNFRHARYYRENGRDLRNLYKVFGIRFDILVNGKEKEDADSSFMYNLQGKEKGPQGN
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2471466..2471602,2481646..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2492900..2492969,2493475..2493476)
location: region:2471466-2493476:1
so has part: feature:2471466-2471602:1:exon
so has part: feature:2481646-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2493476:1:exon

XP_042298810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2471466-2471602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2481646-2481793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2482965-2483036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2483795-2483864:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2485391-2485487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2486087-2486167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2487148-2487289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2488864-2488994:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2490384-2490474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2492900-2492969:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2493475-2493476:1:exon

P2RX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: P2RX1
product: purinergic receptor P2X 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_042442877.1
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2480445..2481005,2481646..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2491287..2491352,2492107..2492208,2492900..2492969,2493475..2494489)
location: region:2480445-2494489:1
so has part: feature:2480445-2481005:1:exon
so has part: feature:2481646-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2491287-2491352:1:exon
so has part: feature:2492107-2492208:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2494489:1:exon

position:2480445:1
position: 2480445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2480445-2481005:1:exon

position:2481005:1
position: 2481005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2481646-2481793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2482965-2483036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2483795-2483864:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2485391-2485487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2486087-2486167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2487148-2487289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2488864-2488994:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2490384-2490474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2491287-2491352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2492107-2492208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2492900-2492969:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2493475-2494489:1:exon

P2RX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 1 isoform X3
translation: MGPYIWDVADYVFPPQGDSSFVVMTNFIVTRRQKQETCPEHPDASKCEEDSKCAQGKFLRQGQGIMTGKCVNFSHAQKTCEIYGWCPVEIDDEVPNPPLLLAAENFTLFIKNSITFPKFKVSRRNLVEKITKPYLRNCTYHRVRDPLCPVFELGYVVKESGQTFSVLARKGGVVGITISWDCDLDWPVRYCVPVYQFHGLYNEDNNISPGFNFRHARYYRENGRDLRNLYKVFGIRFDILVNGKAGKFDIIPTMTTIGSGIGIFGVASVVCDVLLLNFLSNRDYYKQKKFKYAQQDTIPPEKEDADSSFMYNLQGKEKGPQGN
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2481746..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2491287..2491352,2492107..2492208,2492900..2492969,2493475..2493476)
location: region:2481746-2493476:1
so has part: feature:2481746-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2491287-2491352:1:exon
so has part: feature:2492107-2492208:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2493476:1:exon

XP_042298811.1
type: Protein
SIO_000068: ncbiprotein

position:2481746:1
position: 2481746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2481746-2481793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2482965-2483036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2483795-2483864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2485391-2485487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2486087-2486167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2487148-2487289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2488864-2488994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490384-2490474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2491287-2491352:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2492107-2492208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2492900-2492969:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493475-2493476:1:exon

P2RX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 1 isoform X3
translation: MGPYIWDVADYVFPPQGDSSFVVMTNFIVTRRQKQETCPEHPDASKCEEDSKCAQGKFLRQGQGIMTGKCVNFSHAQKTCEIYGWCPVEIDDEVPNPPLLLAAENFTLFIKNSITFPKFKVSRRNLVEKITKPYLRNCTYHRVRDPLCPVFELGYVVKESGQTFSVLARKGGVVGITISWDCDLDWPVRYCVPVYQFHGLYNEDNNISPGFNFRHARYYRENGRDLRNLYKVFGIRFDILVNGKAGKFDIIPTMTTIGSGIGIFGVASVVCDVLLLNFLSNRDYYKQKKFKYAQQDTIPPEKEDADSSFMYNLQGKEKGPQGN
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(2481746..2481793,2482965..2483036,2483795..2483864,2485391..2485487,2486087..2486167,2487148..2487289,2488864..2488994,2490384..2490474,2491287..2491352,2492107..2492208,2492900..2492969,2493475..2493476)
location: region:2481746-2493476:1
so has part: feature:2481746-2481793:1:exon
so has part: feature:2482965-2483036:1:exon
so has part: feature:2483795-2483864:1:exon
so has part: feature:2485391-2485487:1:exon
so has part: feature:2486087-2486167:1:exon
so has part: feature:2487148-2487289:1:exon
so has part: feature:2488864-2488994:1:exon
so has part: feature:2490384-2490474:1:exon
so has part: feature:2491287-2491352:1:exon
so has part: feature:2492107-2492208:1:exon
so has part: feature:2492900-2492969:1:exon
so has part: feature:2493475-2493476:1:exon

XP_042298812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2481746-2481793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2482965-2483036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2483795-2483864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2485391-2485487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2486087-2486167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2487148-2487289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2488864-2488994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490384-2490474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2491287-2491352:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2492107-2492208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2492900-2492969:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493475-2493476:1:exon

CAMKK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: CAMKK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2498750..2549624
location: region:2498750-2549624:1
so has part: feature:2498750-2549624:1:exon
subclass of: SO_0000010

121917161
type: Gene
SIO_000068: ncbigene

position:2498750:1
position: 2498750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2549624:1
position: 2549624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2498750-2549624:1:exon

CAMKK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: CAMKK1
product: calcium/calmodulin dependent protein kinase kinase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442896.1
SIO_010081: CAMKK1
subclass of: SO_0000673
so part of: CAMKK1
location: join(2498750..2498841,2516761..2517309,2523377..2523424,2525978..2526031,2527180..2527231,2527433..2527566,2528324..2528360,2528760..2528781,2529115..2529203,2536321..2536520,2537547..2537600,2538217..2538290,2543478..2543565,2545741..2545869,2546383..2546486,2549423..2549624)
location: region:2498750-2549624:1
so has part: feature:2498750-2498841:1:exon
so has part: feature:2516761-2517309:1:exon
so has part: feature:2523377-2523424:1:exon
so has part: feature:2525978-2526031:1:exon
so has part: feature:2527180-2527231:1:exon
so has part: feature:2527433-2527566:1:exon
so has part: feature:2528324-2528360:1:exon
so has part: feature:2528760-2528781:1:exon
so has part: feature:2529115-2529203:1:exon
so has part: feature:2536321-2536520:1:exon
so has part: feature:2537547-2537600:1:exon
so has part: feature:2538217-2538290:1:exon
so has part: feature:2543478-2543565:1:exon
so has part: feature:2545741-2545869:1:exon
so has part: feature:2546383-2546486:1:exon
so has part: feature:2549423-2549624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2498750-2498841:1:exon

position:2498841:1
position: 2498841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2516761-2517309:1:exon

position:2516761:1
position: 2516761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517309:1
position: 2517309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2523377-2523424:1:exon

position:2523377:1
position: 2523377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523424:1
position: 2523424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2525978-2526031:1:exon

position:2525978:1
position: 2525978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2526031:1
position: 2526031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2527180-2527231:1:exon

position:2527180:1
position: 2527180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527231:1
position: 2527231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2527433-2527566:1:exon

position:2527433:1
position: 2527433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527566:1
position: 2527566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2528324-2528360:1:exon

position:2528324:1
position: 2528324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528360:1
position: 2528360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2528760-2528781:1:exon

position:2528760:1
position: 2528760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528781:1
position: 2528781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2529115-2529203:1:exon

position:2529115:1
position: 2529115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529203:1
position: 2529203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2536321-2536520:1:exon

position:2536321:1
position: 2536321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2536520:1
position: 2536520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2537547-2537600:1:exon

position:2537547:1
position: 2537547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537600:1
position: 2537600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2538217-2538290:1:exon

position:2538217:1
position: 2538217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538290:1
position: 2538290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2543478-2543565:1:exon

position:2543478:1
position: 2543478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543565:1
position: 2543565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2545741-2545869:1:exon

position:2545741:1
position: 2545741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2545869:1
position: 2545869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2546383-2546486:1:exon

position:2546383:1
position: 2546383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2546486:1
position: 2546486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2549423-2549624:1:exon

position:2549423:1
position: 2549423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAMKK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: CAMKK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase kinase 1
translation: MGDTSHEAADGVIDRSCSDSDLADRVASINVTLNPDATSSNGQETVEDNLTFSNNVAPDSQRNGVEDDLGTSEELDGTHELHAPKRAPARPILSGRKYSLQERPAGNYLACTDPTSFGPYATGPSTHISPRILRRPTIESHRVSISDAADCVQLNQYKLKSEIGKGSYGVVKLAYNENDDQYYAMKVLSKKKLLKQYGFPRRPPPRGSKGTAGGTPKPMAPLDRIYQEIAILKKLDHINVVKLIEVLDDPAEDNLYMVFDLLRKGPVMEVPCDAPFTEEQARLYFRDIVLGIEYLHYQKIIHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAQLCSTAGTPAFMAPEAISDSGKSFSGKALDVWAMGITLFCFVYGKCPFIDEFILALHNKIKNKPVEFPEEPWVSPELKDLILKMLEKNPETRITVPEIKLHPWITKFGEDPLPLEEEHCSIVEVTEEEVKNSVKMVPSLPAVILVKAMLRKRSFGNPFEAQARREERSMSAPGDLLIKQGSREGMKDPDLPDVNEDETSS
SIO_010081: CAMKK1
subclass of: SO_0000673
so part of: CAMKK1
location: join(2516863..2517309,2523377..2523424,2525978..2526031,2527180..2527231,2527433..2527566,2528324..2528360,2528760..2528781,2529115..2529203,2536321..2536520,2537547..2537600,2538217..2538290,2543478..2543565,2545741..2545869,2546383..2546486,2549423..2549495)
location: region:2516863-2549495:1
so has part: feature:2516863-2517309:1:exon
so has part: feature:2523377-2523424:1:exon
so has part: feature:2525978-2526031:1:exon
so has part: feature:2527180-2527231:1:exon
so has part: feature:2527433-2527566:1:exon
so has part: feature:2528324-2528360:1:exon
so has part: feature:2528760-2528781:1:exon
so has part: feature:2529115-2529203:1:exon
so has part: feature:2536321-2536520:1:exon
so has part: feature:2537547-2537600:1:exon
so has part: feature:2538217-2538290:1:exon
so has part: feature:2543478-2543565:1:exon
so has part: feature:2545741-2545869:1:exon
so has part: feature:2546383-2546486:1:exon
so has part: feature:2549423-2549495:1:exon

XP_042298830.1
type: Protein
SIO_000068: ncbiprotein

position:2516863:1
position: 2516863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2549495:1
position: 2549495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2516863-2517309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2523377-2523424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2525978-2526031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2527180-2527231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2527433-2527566:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2528324-2528360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2528760-2528781:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2529115-2529203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2536321-2536520:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2537547-2537600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2538217-2538290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543478-2543565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2545741-2545869:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2546383-2546486:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2549423-2549495:1:exon

LOC121917150
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2553657..2559171)
location: region:2553657-2559171:-1
so has part: feature:2553657-2559171:-1:exon
subclass of: SO_0000010

121917150
type: Gene
SIO_000068: ncbigene

position:2553657:-1
position: 2553657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2559171:-1
position: 2559171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553657-2559171:-1:exon

LOC121917150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121917150
product: complement C1q binding protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442882.1
SIO_010081: LOC121917150
subclass of: SO_0000673
so part of: LOC121917150
location: complement(join(2553657..2554157,2554315..2554440,2555352..2555447,2555958..2556042,2556969..2557119,2558816..2559171))
location: region:2553657-2559171:-1
so has part: feature:2558816-2559171:-1:exon
so has part: feature:2556969-2557119:-1:exon
so has part: feature:2555958-2556042:-1:exon
so has part: feature:2555352-2555447:-1:exon
so has part: feature:2554315-2554440:-1:exon
so has part: feature:2553657-2554157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2558816-2559171:-1:exon

position:2558816:-1
position: 2558816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2556969-2557119:-1:exon

position:2556969:-1
position: 2556969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2557119:-1
position: 2557119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2555958-2556042:-1:exon

position:2555958:-1
position: 2555958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2556042:-1
position: 2556042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2555352-2555447:-1:exon

position:2555352:-1
position: 2555352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2555447:-1
position: 2555447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2554315-2554440:-1:exon

position:2554315:-1
position: 2554315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2554440:-1
position: 2554440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2553657-2554157:-1:exon

position:2554157:-1
position: 2554157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121917150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121917150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement component 1 Q subcomponent-binding protein, mitochondrial
translation: MLLARALLSSASMAPRSLHRLLPSRPLAPFGLRLLGPDAASASIRPLARSLWLPRGAAATQARGPFPLLLRPASPAFSCACGGLHTEGDKAFAEFLTDEIKEEKKIQKHKSLPKMSGGWELDVQGTEAKLTRKVAGEMVTVSFNINNSIPPSFDETPEGQKPDEQEPELTSTPNFVVEVTKDDTKQTLVLDCHYPEDEVGHGEEEEESDIFSIREVSFQPAGESEWRENNYTLNTDALDWALYDHLMDFLADRGVDNTFADELVDLSTALEHQEYIRFLEDLKGFVKCQ
SIO_010081: LOC121917150
subclass of: SO_0000673
so part of: LOC121917150
location: complement(join(2554008..2554157,2554315..2554440,2555352..2555447,2555958..2556042,2556969..2557119,2558816..2559077))
location: region:2554008-2559077:-1
so has part: feature:2558816-2559077:-1:exon
so has part: feature:2556969-2557119:-1:exon
so has part: feature:2555958-2556042:-1:exon
so has part: feature:2555352-2555447:-1:exon
so has part: feature:2554315-2554440:-1:exon
so has part: feature:2554008-2554157:-1:exon

XP_042298816.1
type: Protein
SIO_000068: ncbiprotein

position:2554008:-1
position: 2554008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2559077:-1
position: 2559077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2558816-2559077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2556969-2557119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2555958-2556042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2555352-2555447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2554315-2554440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2554008-2554157:-1:exon

DERL2
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: DERL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2561495..2586262)
location: region:2561495-2586262:-1
so has part: feature:2561495-2586262:-1:exon
subclass of: SO_0000010

121917156
type: Gene
SIO_000068: ncbigene

position:2561495:-1
position: 2561495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2586262:-1
position: 2586262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2561495-2586262:-1:exon

DERL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: DERL2
product: derlin 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 2 codons
transcript id: XM_042442889.1
SIO_010081: DERL2
subclass of: SO_0000673
so part of: DERL2
location: complement(join(2561495..2563572,2564064..2564150,2564437..2564640,2564878..2565005,2566399..2566487,2566734..2566893,2567927..2568038,2568335..2568520,2569799..2569969,2570176..2570403,2571291..2571451,2577528..2578649,2581150..2581237,2582058..2582281,2582998..2583074,2583909..2583989,2584426..2584491,2586101..2586262))
location: region:2561495-2586262:-1
so has part: feature:2586101-2586262:-1:exon
so has part: feature:2584426-2584491:-1:exon
so has part: feature:2583909-2583989:-1:exon
so has part: feature:2582998-2583074:-1:exon
so has part: feature:2582058-2582281:-1:exon
so has part: feature:2581150-2581237:-1:exon
so has part: feature:2577528-2578649:-1:exon
so has part: feature:2571291-2571451:-1:exon
so has part: feature:2570176-2570403:-1:exon
so has part: feature:2569799-2569969:-1:exon
so has part: feature:2568335-2568520:-1:exon
so has part: feature:2567927-2568038:-1:exon
so has part: feature:2566734-2566893:-1:exon
so has part: feature:2566399-2566487:-1:exon
so has part: feature:2564878-2565005:-1:exon
so has part: feature:2564437-2564640:-1:exon
so has part: feature:2564064-2564150:-1:exon
so has part: feature:2561495-2563572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2586101-2586262:-1:exon

position:2586101:-1
position: 2586101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2584426-2584491:-1:exon

position:2584426:-1
position: 2584426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584491:-1
position: 2584491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2583909-2583989:-1:exon

position:2583909:-1
position: 2583909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2583989:-1
position: 2583989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2582998-2583074:-1:exon

position:2582998:-1
position: 2582998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2583074:-1
position: 2583074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2582058-2582281:-1:exon

position:2582058:-1
position: 2582058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2582281:-1
position: 2582281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2581150-2581237:-1:exon

position:2581150:-1
position: 2581150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2581237:-1
position: 2581237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2577528-2578649:-1:exon

position:2577528:-1
position: 2577528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2578649:-1
position: 2578649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2571291-2571451:-1:exon

position:2571291:-1
position: 2571291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571451:-1
position: 2571451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2570176-2570403:-1:exon

position:2570176:-1
position: 2570176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2570403:-1
position: 2570403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2569799-2569969:-1:exon

position:2569799:-1
position: 2569799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2569969:-1
position: 2569969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2568335-2568520:-1:exon

position:2568335:-1
position: 2568335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568520:-1
position: 2568520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2567927-2568038:-1:exon

position:2567927:-1
position: 2567927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568038:-1
position: 2568038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2566734-2566893:-1:exon

position:2566734:-1
position: 2566734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566893:-1
position: 2566893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2566399-2566487:-1:exon

position:2566399:-1
position: 2566399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566487:-1
position: 2566487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2564878-2565005:-1:exon

position:2564878:-1
position: 2564878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2565005:-1
position: 2565005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2564437-2564640:-1:exon

position:2564437:-1
position: 2564437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564640:-1
position: 2564640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2564064-2564150:-1:exon

position:2564064:-1
position: 2564064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564150:-1
position: 2564150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2561495-2563572:-1:exon

position:2563572:-1
position: 2563572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX33
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: DHX33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2561495..2570334)
location: region:2561495-2570334:-1
so has part: feature:2561495-2570334:-1:exon
subclass of: SO_0000010

121917147
type: Gene
SIO_000068: ncbigene

position:2570334:-1
position: 2570334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2561495-2570334:-1:exon

DHX33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: DHX33
product: DEAH-box helicase 33
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442873.1
SIO_010081: DHX33
subclass of: SO_0000673
so part of: DHX33
location: complement(join(2561495..2563572,2564064..2564150,2564437..2564640,2564878..2565005,2566399..2566487,2566734..2566893,2567927..2568038,2568335..2568520,2569799..2569969,2570176..2570334))
location: region:2561495-2570334:-1
so has part: feature:2570176-2570334:-1:exon
so has part: feature:2569799-2569969:-1:exon
so has part: feature:2568335-2568520:-1:exon
so has part: feature:2567927-2568038:-1:exon
so has part: feature:2566734-2566893:-1:exon
so has part: feature:2566399-2566487:-1:exon
so has part: feature:2564878-2565005:-1:exon
so has part: feature:2564437-2564640:-1:exon
so has part: feature:2564064-2564150:-1:exon
so has part: feature:2561495-2563572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2570176-2570334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2569799-2569969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2568335-2568520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2567927-2568038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566734-2566893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566399-2566487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2564878-2565005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2564437-2564640:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2564064-2564150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2561495-2563572:-1:exon

DHX33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: DHX33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DHX33
translation: MLLREAIGDPLMHKYSVVVLDEAHERTVHTDVLFGVVKAAQKKRKELGKLPLKVVVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYAKQPQSDYLQAALVTVFQIHQEAPPSHDILVFLTGQEEIEAMTKTCRDISKHLPDGCPQMVVMPLYASLPYSQQLRVFQVAPKGYRKVILSTNIAETSITIPGIKYVVDTGMVKAKRYTPESGLEVLAVQRISKAQAWQRAGRAGREDSGLCYRLFTEDEFEKFDKMTVPEIQRCNLASVMLHLLALRIPNVLTFDFMSKPSPEALQAAAEQLALLGAVERKDDQLILTPLGRKMAAFPLEPKFSKTILTAPKFHCSEEILTIVSLLSVDSVLYNPPSRRDEVQAVRKKFISSEGDHITLLNIYRAFKNISGNREWCKENFVNSRNMMLVSDIRAQLRDICIKLSIPLESSRSDTGNVRRCLAYSLFMNTAELQPDGTYTTTDSHQPVAIHPSSVLFHCKPACVTYNELLHTSKCYMRDLCVVDADWLYDAAPEYFRRKLRAAKN
SIO_010081: DHX33
subclass of: SO_0000673
so part of: DHX33
location: complement(join(2563264..2563572,2564064..2564150,2564437..2564640,2564878..2565005,2566399..2566487,2566734..2566893,2567927..2568038,2568335..2568520,2569799..2569969,2570176..2570334))
location: region:2563264-2570334:-1
so has part: feature:2570176-2570334:-1:exon
so has part: feature:2569799-2569969:-1:exon
so has part: feature:2568335-2568520:-1:exon
so has part: feature:2567927-2568038:-1:exon
so has part: feature:2566734-2566893:-1:exon
so has part: feature:2566399-2566487:-1:exon
so has part: feature:2564878-2565005:-1:exon
so has part: feature:2564437-2564640:-1:exon
so has part: feature:2564064-2564150:-1:exon
so has part: feature:2563264-2563572:-1:exon

XP_042298807.1
type: Protein
SIO_000068: ncbiprotein

position:2563264:-1
position: 2563264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2570176-2570334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2569799-2569969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2568335-2568520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2567927-2568038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566734-2566893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566399-2566487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2564878-2565005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2564437-2564640:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2564064-2564150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2563264-2563572:-1:exon

DERL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: DERL2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 2 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2583923..2583925),aa:OTHER)
transl except: (pos:complement(2582267..2582269),aa:OTHER)
product: LOW QUALITY PROTEIN: derlin-2
translation: MAYQTFRQEYLQVPPVTRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQVWRLITNYLFLGPVGFNFLFIXYFVSLYRYCRMLEEGSFRGRTADFVLLFLLRLFLXPFSSPAFGLFVNLACFLGQXVTIMLVYGLEPQEPFRRMNFLWLLIVQAPFLPWVLWGFRSAGNSSIVDLLGIAVGHIYFSWKSLPKPAGRRKAFSTPSILKAIFDTPEDDPNYNPLPEERPGGFAWGEGQRLGG
SIO_010081: DERL2
subclass of: SO_0000673
so part of: DERL2
location: complement(join(2578544..2578649,2581150..2581237,2582058..2582281,2582998..2583074,2583909..2583989,2584426..2584491,2586101..2586193))
location: region:2578544-2586193:-1
so has part: feature:2586101-2586193:-1:exon
so has part: feature:2584426-2584491:-1:exon
so has part: feature:2583909-2583989:-1:exon
so has part: feature:2582998-2583074:-1:exon
so has part: feature:2582058-2582281:-1:exon
so has part: feature:2581150-2581237:-1:exon
so has part: feature:2578544-2578649:-1:exon

XP_042298823.1
type: Protein
SIO_000068: ncbiprotein

position:2578544:-1
position: 2578544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2586193:-1
position: 2586193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586101-2586193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2584426-2584491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2583909-2583989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2582998-2583074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2582058-2582281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2581150-2581237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2578544-2578649:-1:exon

MIS12
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: MIS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2586254..2588732
location: region:2586254-2588732:1
so has part: feature:2586254-2588732:1:exon
subclass of: SO_0000010

121917157
type: Gene
SIO_000068: ncbigene

position:2586254:1
position: 2586254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588732:1
position: 2588732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586254-2588732:1:exon

MIS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: MIS12
product: MIS12 kinetochore complex component, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442890.1
SIO_010081: MIS12
subclass of: SO_0000673
so part of: MIS12
location: join(2586254..2586616,2587411..2588732)
location: region:2586254-2588732:1
so has part: feature:2586254-2586616:1:exon
so has part: feature:2587411-2588732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2586254-2586616:1:exon

position:2586616:1
position: 2586616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2587411-2588732:1:exon

position:2587411:1
position: 2587411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MIS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: MIS12
product: MIS12 kinetochore complex component, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442891.1
SIO_010081: MIS12
subclass of: SO_0000673
so part of: MIS12
location: join(2586254..2586543,2587411..2588732)
location: region:2586254-2588732:1
so has part: feature:2586254-2586543:1:exon
so has part: feature:2587411-2588732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2586254-2586543:1:exon

position:2586543:1
position: 2586543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2587411-2588732:1:exon

MIS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: MIS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MIS12 homolog
translation: MSGDLMAYETQFFGFTPQTLMLRIYIAFQDHLSHIMLVAEEAMLNKLGSAHRSITPSLVRRGTEQFFSFMKERFESLFGQIEETLLRTVLSLPKNVLLPEHQVQEKFPYSAEQFQELQDEVGRREERLKVETRAGCALQEELEEQKVVQAHLEKVLRWFDGLDSVSREEGGGNLKEGFEALTKTATKLRDVVREVERKMDQLEKL
SIO_010081: MIS12
subclass of: SO_0000673
so part of: MIS12
location: 2587425..2588042
location: region:2587425-2588042:1
so has part: feature:2587425-2588042:1:exon

XP_042298824.1
type: Protein
SIO_000068: ncbiprotein

position:2587425:1
position: 2587425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588042:1
position: 2588042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587425-2588042:1:exon

MIS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: MIS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MIS12 homolog
translation: MSGDLMAYETQFFGFTPQTLMLRIYIAFQDHLSHIMLVAEEAMLNKLGSAHRSITPSLVRRGTEQFFSFMKERFESLFGQIEETLLRTVLSLPKNVLLPEHQVQEKFPYSAEQFQELQDEVGRREERLKVETRAGCALQEELEEQKVVQAHLEKVLRWFDGLDSVSREEGGGNLKEGFEALTKTATKLRDVVREVERKMDQLEKL
SIO_010081: MIS12
subclass of: SO_0000673
so part of: MIS12
location: 2587425..2588042
location: region:2587425-2588042:1
so has part: feature:2587425-2588042:1:exon

XP_042298825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2587425-2588042:1:exon

RPAIN
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: RPAIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2589413..2594516)
location: region:2589413-2594516:-1
so has part: feature:2589413-2594516:-1:exon
subclass of: SO_0000010

121917158
type: Gene
SIO_000068: ncbigene

position:2589413:-1
position: 2589413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2594516:-1
position: 2594516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2589413-2594516:-1:exon

RPAIN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: RPAIN
product: RPA interacting protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442892.1
SIO_010081: RPAIN
subclass of: SO_0000673
so part of: RPAIN
location: complement(join(2589413..2589701,2591382..2591516,2591683..2591746,2593044..2593158,2593246..2593306,2594155..2594516))
location: region:2589413-2594516:-1
so has part: feature:2594155-2594516:-1:exon
so has part: feature:2593246-2593306:-1:exon
so has part: feature:2593044-2593158:-1:exon
so has part: feature:2591683-2591746:-1:exon
so has part: feature:2591382-2591516:-1:exon
so has part: feature:2589413-2589701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2594155-2594516:-1:exon

position:2594155:-1
position: 2594155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2593246-2593306:-1:exon

position:2593246:-1
position: 2593246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593306:-1
position: 2593306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2593044-2593158:-1:exon

position:2593044:-1
position: 2593044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593158:-1
position: 2593158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2591683-2591746:-1:exon

position:2591683:-1
position: 2591683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591746:-1
position: 2591746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2591382-2591516:-1:exon

position:2591382:-1
position: 2591382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591516:-1
position: 2591516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2589413-2589701:-1:exon

position:2589701:-1
position: 2589701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPAIN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: RPAIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RPA-interacting protein
translation: MERLKSSRARLLERYRHLGENAARRTSDNNLLVQEVMEAEWQALKSSNAPLPSLRKPDAFPQASEDSELAVLEEIQQELILQEQLVLEEYHQSLRFDEECLNAMLEDLEMGHRIICPVCRRDGLCVKSHLVACPCGVRIATQEMTEEKLRSLLEDAMTEHSQHCHYSPEFAVTKGMERDANLLMSCRACDSWAIVL
SIO_010081: RPAIN
subclass of: SO_0000673
so part of: RPAIN
location: complement(join(2589672..2589701,2591382..2591516,2591683..2591746,2593044..2593158,2593246..2593306,2594155..2594340))
location: region:2589672-2594340:-1
so has part: feature:2594155-2594340:-1:exon
so has part: feature:2593246-2593306:-1:exon
so has part: feature:2593044-2593158:-1:exon
so has part: feature:2591683-2591746:-1:exon
so has part: feature:2591382-2591516:-1:exon
so has part: feature:2589672-2589701:-1:exon

XP_042298826.1
type: Protein
SIO_000068: ncbiprotein

position:2589672:-1
position: 2589672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2594340:-1
position: 2594340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594155-2594340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2593246-2593306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593044-2593158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2591683-2591746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2591382-2591516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2589672-2589701:-1:exon

LOC121916980
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2602164..2606755
location: region:2602164-2606755:1
so has part: feature:2602164-2606755:1:exon
subclass of: SO_0000010

121916980
type: Gene
SIO_000068: ncbigene

position:2602164:1
position: 2602164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2606755:1
position: 2606755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2602164-2606755:1:exon

LOC121916980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916980
product: coiled-coil domain-containing protein 74A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442573.1
SIO_010081: LOC121916980
subclass of: SO_0000673
so part of: LOC121916980
location: join(2602164..2602650,2603642..2603689,2604735..2604827,2606742..2606755)
location: region:2602164-2606755:1
so has part: feature:2602164-2602650:1:exon
so has part: feature:2603642-2603689:1:exon
so has part: feature:2604735-2604827:1:exon
so has part: feature:2606742-2606755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2602164-2602650:1:exon

position:2602650:1
position: 2602650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2603642-2603689:1:exon

position:2603642:1
position: 2603642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2603689:1
position: 2603689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2604735-2604827:1:exon

position:2604735:1
position: 2604735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2604827:1
position: 2604827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2606742-2606755:1:exon

position:2606742:1
position: 2606742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121916980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 74A-like
translation: MQRPGSGFPPPRHLQYPEEGSWRRTAAELERNLHFLQRQHGETLAQLHEEVERLKRENKELHYKLIMYPVLQNVSEHPSFEKTHRRDASLRRSPRGSSTGYDHREDVMSN
SIO_010081: LOC121916980
subclass of: SO_0000673
so part of: LOC121916980
location: join(2602473..2602650,2603642..2603689,2604735..2604827,2606742..2606755)
location: region:2602473-2606755:1
so has part: feature:2602473-2602650:1:exon
so has part: feature:2603642-2603689:1:exon
so has part: feature:2604735-2604827:1:exon
so has part: feature:2606742-2606755:1:exon

XP_042298507.1
type: Protein
SIO_000068: ncbiprotein

position:2602473:1
position: 2602473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2602473-2602650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2603642-2603689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2604735-2604827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2606742-2606755:1:exon

LOC121916981
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121916981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2606784..2613490)
location: region:2606784-2613490:-1
so has part: feature:2606784-2613490:-1:exon
subclass of: SO_0000010

121916981
type: Gene
SIO_000068: ncbigene

position:2606784:-1
position: 2606784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2613490:-1
position: 2613490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606784-2613490:-1:exon

LOC121916981
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LOC121916981
product: rabankyrin-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_042442574.1
SIO_010081: LOC121916981
subclass of: SO_0000673
so part of: LOC121916981
location: complement(join(2606784..2606980,2612776..2613490))
location: region:2606784-2613490:-1
so has part: feature:2612776-2613490:-1:exon
so has part: feature:2606784-2606980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2612776-2613490:-1:exon

position:2612776:-1
position: 2612776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2606784-2606980:-1:exon

position:2606980:-1
position: 2606980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121916981
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LOC121916981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rabankyrin-5-like
translation: MQAATELYWSLEGRESKRGCVCTKMPSCCHTVTTTREEEVAKLEKHLMLLRQEYVKLQKKLTETERKCALLAAQSNKENASDSFITRLLSIVAELYEQEQYR
SIO_010081: LOC121916981
subclass of: SO_0000673
so part of: LOC121916981
location: complement(join(2606784..2606980,2612776..2612887))
location: region:2606784-2612887:-1
so has part: feature:2612776-2612887:-1:exon
so has part: feature:2606784-2606980:-1:exon

XP_042298508.1
type: Protein
SIO_000068: ncbiprotein

position:2612887:-1
position: 2612887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2612776-2612887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2606784-2606980:-1:exon

RASA4B
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: RASA4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2658485..2697996)
location: region:2658485-2697996:-1
so has part: feature:2658485-2697996:-1:exon
subclass of: SO_0000010

121916982
type: Gene
SIO_000068: ncbigene

position:2658485:-1
position: 2658485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697996:-1
position: 2697996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2658485-2697996:-1:exon

RASA4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: RASA4B
product: RAS p21 protein activator 4B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042442575.1
SIO_010081: RASA4B
subclass of: SO_0000673
so part of: RASA4B
location: complement(join(2658485..2659761,2660954..2661017,2662250..2662370,2663200..2663335,2664225..2664362,2665685..2665736,2668930..2669042,2670140..2670204,2670525..2670678,2671484..2671601,2672088..2672179,2672602..2672736,2673328..2673409,2677296..2677425,2677710..2677771,2678265..2678378,2679713..2679769,2697878..2697996))
location: region:2658485-2697996:-1
so has part: feature:2697878-2697996:-1:exon
so has part: feature:2679713-2679769:-1:exon
so has part: feature:2678265-2678378:-1:exon
so has part: feature:2677710-2677771:-1:exon
so has part: feature:2677296-2677425:-1:exon
so has part: feature:2673328-2673409:-1:exon
so has part: feature:2672602-2672736:-1:exon
so has part: feature:2672088-2672179:-1:exon
so has part: feature:2671484-2671601:-1:exon
so has part: feature:2670525-2670678:-1:exon
so has part: feature:2670140-2670204:-1:exon
so has part: feature:2668930-2669042:-1:exon
so has part: feature:2665685-2665736:-1:exon
so has part: feature:2664225-2664362:-1:exon
so has part: feature:2663200-2663335:-1:exon
so has part: feature:2662250-2662370:-1:exon
so has part: feature:2660954-2661017:-1:exon
so has part: feature:2658485-2659761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2697878-2697996:-1:exon

position:2697878:-1
position: 2697878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2679713-2679769:-1:exon

position:2679713:-1
position: 2679713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2679769:-1
position: 2679769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2678265-2678378:-1:exon

position:2678265:-1
position: 2678265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2678378:-1
position: 2678378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2677710-2677771:-1:exon

position:2677710:-1
position: 2677710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2677771:-1
position: 2677771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2677296-2677425:-1:exon

position:2677296:-1
position: 2677296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2677425:-1
position: 2677425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2673328-2673409:-1:exon

position:2673328:-1
position: 2673328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673409:-1
position: 2673409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2672602-2672736:-1:exon

position:2672602:-1
position: 2672602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2672736:-1
position: 2672736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2672088-2672179:-1:exon

position:2672088:-1
position: 2672088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2672179:-1
position: 2672179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2671484-2671601:-1:exon

position:2671484:-1
position: 2671484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2671601:-1
position: 2671601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2670525-2670678:-1:exon

position:2670525:-1
position: 2670525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2670678:-1
position: 2670678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2670140-2670204:-1:exon

position:2670140:-1
position: 2670140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2670204:-1
position: 2670204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2668930-2669042:-1:exon

position:2668930:-1
position: 2668930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669042:-1
position: 2669042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2665685-2665736:-1:exon

position:2665685:-1
position: 2665685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665736:-1
position: 2665736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2664225-2664362:-1:exon

position:2664225:-1
position: 2664225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664362:-1
position: 2664362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2663200-2663335:-1:exon

position:2663200:-1
position: 2663200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2663335:-1
position: 2663335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2662250-2662370:-1:exon

position:2662250:-1
position: 2662250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662370:-1
position: 2662370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2660954-2661017:-1:exon

position:2660954:-1
position: 2660954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2661017:-1
position: 2661017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2658485-2659761:-1:exon

position:2659761:-1
position: 2659761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RASA4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: RASA4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 4B
translation: MWKTLFPFWGEEYDVHLPPTFHCVSFYVMDEDALSRDDVIGKVHLTQSLLAEHPKGYSGWLNLTEIDPDEEVQGEIHLQMEIVSSRAGRKLRCTVFDARDLARKDRNGASDPFVRVRYNGKIQETSVIKKSCYPRWNETFEFDLEEPAVEKLCVVEVWDWDLVSRNDFLGKVVFNVQGLENVQREEGWFLLRPDRSKPRLAEGNLGSLHLQVQLRDEMVLPSLHYQPLVELLCHKVKAGAKDGKVHLLTLIDETTTAECRQEVAVNLVKLFLGQGLAKEFLDLLFKMELDKTCEASTLFRSNSLASKSMESFLKVAGMQYLHRVLGPTINRVFEEKRYIELDPSKVESKDVGFSLTSEALTYSKIPNSKKSSFILLANILAAEKVEEKSFGNSNVMQIIYANEAGQADTAYLQCKCVNELNQWLSALRKGCVNNTGMLCSYHPGVFRGDKWSCCHQKDKTDLGCDKTRHGVTLREWNDPLDPDLEAHLIFRHLVGAQERMREKYMELLSLENGESLIQAKAKTPKTSTAPVSFSRSYGNWKKYTLGNSLGRAVWPARTEIAWWNCRRDSGPNRFSQTGPILVALEPKYDQTPPGILGTLLGP
SIO_010081: RASA4B
subclass of: SO_0000673
so part of: RASA4B
location: complement(join(2659519..2659761,2660954..2661017,2662250..2662370,2663200..2663335,2664225..2664362,2665685..2665736,2668930..2669042,2670140..2670204,2670525..2670678,2671484..2671601,2672088..2672179,2672602..2672736,2673328..2673409,2677296..2677425,2677710..2677771,2678265..2678368))
location: region:2659519-2678368:-1
so has part: feature:2678265-2678368:-1:exon
so has part: feature:2677710-2677771:-1:exon
so has part: feature:2677296-2677425:-1:exon
so has part: feature:2673328-2673409:-1:exon
so has part: feature:2672602-2672736:-1:exon
so has part: feature:2672088-2672179:-1:exon
so has part: feature:2671484-2671601:-1:exon
so has part: feature:2670525-2670678:-1:exon
so has part: feature:2670140-2670204:-1:exon
so has part: feature:2668930-2669042:-1:exon
so has part: feature:2665685-2665736:-1:exon
so has part: feature:2664225-2664362:-1:exon
so has part: feature:2663200-2663335:-1:exon
so has part: feature:2662250-2662370:-1:exon
so has part: feature:2660954-2661017:-1:exon
so has part: feature:2659519-2659761:-1:exon

XP_042298509.1
type: Protein
SIO_000068: ncbiprotein

position:2659519:-1
position: 2659519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2678368:-1
position: 2678368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2678265-2678368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2677710-2677771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2677296-2677425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2673328-2673409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2672602-2672736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2672088-2672179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2671484-2671601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2670525-2670678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2670140-2670204:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2668930-2669042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2665685-2665736:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2664225-2664362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2663200-2663335:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2662250-2662370:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2660954-2661017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2659519-2659761:-1:exon

POLR2J
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: POLR2J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2703804..2710327
location: region:2703804-2710327:1
so has part: feature:2703804-2710327:1:exon
subclass of: SO_0000010

121917132
type: Gene
SIO_000068: ncbigene

position:2703804:1
position: 2703804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710327:1
position: 2710327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2703804-2710327:1:exon

POLR2J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: POLR2J
product: RNA polymerase II subunit J, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442851.1
SIO_010081: POLR2J
subclass of: SO_0000673
so part of: POLR2J
location: join(2703804..2704391,2707734..2707823,2709099..2709273,2710133..2710327)
location: region:2703804-2710327:1
so has part: feature:2703804-2704391:1:exon
so has part: feature:2707734-2707823:1:exon
so has part: feature:2709099-2709273:1:exon
so has part: feature:2710133-2710327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2703804-2704391:1:exon

position:2704391:1
position: 2704391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2707734-2707823:1:exon

position:2707734:1
position: 2707734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707823:1
position: 2707823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2709099-2709273:1:exon

position:2709099:1
position: 2709099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709273:1
position: 2709273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2710133-2710327:1:exon

position:2710133:1
position: 2710133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLR2J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: POLR2J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB11-a isoform X2
translation: MLKWRLSYFGHILRRITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
SIO_010081: POLR2J
subclass of: SO_0000673
so part of: POLR2J
location: join(2704348..2704391,2707734..2707823,2709099..2709273,2710133..2710168)
location: region:2704348-2710168:1
so has part: feature:2704348-2704391:1:exon
so has part: feature:2707734-2707823:1:exon
so has part: feature:2709099-2709273:1:exon
so has part: feature:2710133-2710168:1:exon

XP_042298785.1
type: Protein
SIO_000068: ncbiprotein

position:2704348:1
position: 2704348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710168:1
position: 2710168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704348-2704391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2707734-2707823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2709099-2709273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2710133-2710168:1:exon

POLR2J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: POLR2J
product: RNA polymerase II subunit J, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442850.1
SIO_010081: POLR2J
subclass of: SO_0000673
so part of: POLR2J
location: join(2706700..2706847,2707734..2707823,2709099..2709273,2710133..2710327)
location: region:2706700-2710327:1
so has part: feature:2706700-2706847:1:exon
so has part: feature:2707734-2707823:1:exon
so has part: feature:2709099-2709273:1:exon
so has part: feature:2710133-2710327:1:exon

position:2706700:1
position: 2706700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2706700-2706847:1:exon

position:2706847:1
position: 2706847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2707734-2707823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2709099-2709273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2710133-2710327:1:exon

POLR2J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: POLR2J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB11-a isoform X1
translation: MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
SIO_010081: POLR2J
subclass of: SO_0000673
so part of: POLR2J
location: join(2706795..2706847,2707734..2707823,2709099..2709273,2710133..2710168)
location: region:2706795-2710168:1
so has part: feature:2706795-2706847:1:exon
so has part: feature:2707734-2707823:1:exon
so has part: feature:2709099-2709273:1:exon
so has part: feature:2710133-2710168:1:exon

XP_042298784.1
type: Protein
SIO_000068: ncbiprotein

position:2706795:1
position: 2706795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2706795-2706847:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2707734-2707823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2709099-2709273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2710133-2710168:1:exon

LRWD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LRWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2711814..2732123)
location: region:2711814-2732123:-1
so has part: feature:2711814-2732123:-1:exon
subclass of: SO_0000010

121916869
type: Gene
SIO_000068: ncbigene

position:2711814:-1
position: 2711814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2732123:-1
position: 2732123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711814-2732123:-1:exon

LRWD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: LRWD1
product: leucine rich repeats and WD repeat domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442394.1
SIO_010081: LRWD1
subclass of: SO_0000673
so part of: LRWD1
location: complement(join(2711814..2712213,2712765..2712889,2713527..2713685,2714091..2714188,2714472..2714615,2714705..2714777,2716179..2716386,2717554..2717663,2719145..2719271,2720230..2720574,2721312..2721551,2723111..2723263,2724633..2724752,2725807..2726041,2727084..2727230,2731994..2732123))
location: region:2711814-2732123:-1
so has part: feature:2731994-2732123:-1:exon
so has part: feature:2727084-2727230:-1:exon
so has part: feature:2725807-2726041:-1:exon
so has part: feature:2724633-2724752:-1:exon
so has part: feature:2723111-2723263:-1:exon
so has part: feature:2721312-2721551:-1:exon
so has part: feature:2720230-2720574:-1:exon
so has part: feature:2719145-2719271:-1:exon
so has part: feature:2717554-2717663:-1:exon
so has part: feature:2716179-2716386:-1:exon
so has part: feature:2714705-2714777:-1:exon
so has part: feature:2714472-2714615:-1:exon
so has part: feature:2714091-2714188:-1:exon
so has part: feature:2713527-2713685:-1:exon
so has part: feature:2712765-2712889:-1:exon
so has part: feature:2711814-2712213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2731994-2732123:-1:exon

position:2731994:-1
position: 2731994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2727084-2727230:-1:exon

position:2727084:-1
position: 2727084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727230:-1
position: 2727230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2725807-2726041:-1:exon

position:2725807:-1
position: 2725807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726041:-1
position: 2726041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2724633-2724752:-1:exon

position:2724633:-1
position: 2724633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724752:-1
position: 2724752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2723111-2723263:-1:exon

position:2723111:-1
position: 2723111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723263:-1
position: 2723263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2721312-2721551:-1:exon

position:2721312:-1
position: 2721312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721551:-1
position: 2721551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2720230-2720574:-1:exon

position:2720230:-1
position: 2720230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2720574:-1
position: 2720574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2719145-2719271:-1:exon

position:2719145:-1
position: 2719145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719271:-1
position: 2719271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2717554-2717663:-1:exon

position:2717554:-1
position: 2717554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717663:-1
position: 2717663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2716179-2716386:-1:exon

position:2716179:-1
position: 2716179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716386:-1
position: 2716386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2714705-2714777:-1:exon

position:2714705:-1
position: 2714705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714777:-1
position: 2714777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2714472-2714615:-1:exon

position:2714472:-1
position: 2714472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714615:-1
position: 2714615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2714091-2714188:-1:exon

position:2714091:-1
position: 2714091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714188:-1
position: 2714188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2713527-2713685:-1:exon

position:2713527:-1
position: 2713527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713685:-1
position: 2713685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2712765-2712889:-1:exon

position:2712765:-1
position: 2712765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2712889:-1
position: 2712889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2711814-2712213:-1:exon

position:2712213:-1
position: 2712213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRWD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: LRWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and WD repeat-containing protein 1
translation: MSKITTELLLERAVPKSTRLRKIKTLNLSRLQITTEDLEPQLFSHLRHLQELDLSDNLLERLPDNLSLPNLRVLNCNNNHLEDVVALQQFPQLEELTYMNNLYLTPSDDYKVMFLLRNLRQLNGKDITKLANHVRVVNSRELTTRVSAHWGKNFRNQLPKTLSPEQLKTIRKKFIRSAQAHVAYGPSSLSDFTRWRVKMIAEEFLNSLINQESKPTPEVEETMEEEEEEEEEEEEEEEEAAEEEKEEEEEEEEEEDNNEEEENTHIAETENKVIAKGTVIPSKRKGIHSKGTSTSKRSRSQSSSKEEPSPTPKKSSRLQEERSPEGGKSSRPQAKESQASQDPGGAHRNGGRLPKAQSHKRSSHQKEEHMEKEEEDGRDACSTPVKDLESEETISLEPVHFLQCHSKGNNRDDFKTQLWACVFEPPLDCGTRKDPVVSSSRTAATCGGDSVCLVDCETGIVLKKYKVTGEEFYTVAWTTLTMVTSDGRKKRHNVLAAAGRRGIVKLIHVTADYCYGEIKAHKKPIATACFSPISETHLFTASYDKKICMWDIGVPDCDYNFKERQLMVLETVNTPLRIALVPSCPDRYLVAGCEQGCFAWDIRLDDKQTKNRPFEVEFQFPNDEGNETSSHRVDGLAFLNEDIVVTKSSKTGSINLWSWSRSFKQGKGGQRTVQAVILAELEWSSTDLPYLTLSTCPTEEYVFCGDEKGGVWMYDLSNHLSALSITKEDCTTKRIGPSQVLKWPELKANGELLTDVLVNNVVTDPTFTYLVALTDVNIAAIWKKT
SIO_010081: LRWD1
subclass of: SO_0000673
so part of: LRWD1
location: complement(join(2712073..2712213,2712765..2712889,2713527..2713685,2714091..2714188,2714472..2714615,2714705..2714777,2716179..2716386,2717554..2717663,2719145..2719271,2720230..2720574,2721312..2721551,2723111..2723263,2724633..2724752,2725807..2726041,2727084..2727163))
location: region:2712073-2727163:-1
so has part: feature:2727084-2727163:-1:exon
so has part: feature:2725807-2726041:-1:exon
so has part: feature:2724633-2724752:-1:exon
so has part: feature:2723111-2723263:-1:exon
so has part: feature:2721312-2721551:-1:exon
so has part: feature:2720230-2720574:-1:exon
so has part: feature:2719145-2719271:-1:exon
so has part: feature:2717554-2717663:-1:exon
so has part: feature:2716179-2716386:-1:exon
so has part: feature:2714705-2714777:-1:exon
so has part: feature:2714472-2714615:-1:exon
so has part: feature:2714091-2714188:-1:exon
so has part: feature:2713527-2713685:-1:exon
so has part: feature:2712765-2712889:-1:exon
so has part: feature:2712073-2712213:-1:exon

XP_042298328.1
type: Protein
SIO_000068: ncbiprotein

position:2712073:-1
position: 2712073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727163:-1
position: 2727163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727084-2727163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2725807-2726041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2724633-2724752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2723111-2723263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2721312-2721551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2720230-2720574:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2719145-2719271:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717554-2717663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2716179-2716386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2714705-2714777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2714472-2714615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2714091-2714188:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2713527-2713685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2712765-2712889:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2712073-2712213:-1:exon

ALKBH4
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: ALKBH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2732135..2739170
location: region:2732135-2739170:1
so has part: feature:2732135-2739170:1:exon
subclass of: SO_0000010

121916870
type: Gene
SIO_000068: ncbigene

position:2732135:1
position: 2732135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739170:1
position: 2739170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2732135-2739170:1:exon

ALKBH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: ALKBH4
product: alkB homolog 4, lysine demethylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_042442395.1
SIO_010081: ALKBH4
subclass of: SO_0000673
so part of: ALKBH4
location: join(2732135..2732265,2733748..2733945,2737066..2739170)
location: region:2732135-2739170:1
so has part: feature:2732135-2732265:1:exon
so has part: feature:2733748-2733945:1:exon
so has part: feature:2737066-2739170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2732135-2732265:1:exon

position:2732265:1
position: 2732265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2733748-2733945:1:exon

position:2733748:1
position: 2733748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2733945:1
position: 2733945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2737066-2739170:1:exon

position:2737066:1
position: 2737066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ALKBH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: ALKBH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 4
translation: MEKGDSEGGCGCKGIRRCLRCEAAPPPEKAANFTYCPRTGFALGEKHSAFAGWAFPFPGVCLLEDFVSAEEEDKMVALMDQDPWKPSQSGRRKQDYGPKVNFKKRKLKADGFAGLPSFSREIVKRMGDFSVLEGFSPVEQCNLDYGPERGSAIDPHWDDWWLWGERLVSLNLLSATVLSMSCDLDDPLQLFPDHLRQSEQTPSSGSLDTFQVPRHQTPSPAEEFGSTTKREADGPLSTRSVPSREVIVAIHLPRRSLVVLHGPARHRWKHAIYRNHITSRRICITFRELSAEFSLGGKQEELGKKLLGVALTFQGRPV
SIO_010081: ALKBH4
subclass of: SO_0000673
so part of: ALKBH4
location: join(2732182..2732265,2733748..2733945,2737066..2737740)
location: region:2732182-2737740:1
so has part: feature:2732182-2732265:1:exon
so has part: feature:2733748-2733945:1:exon
so has part: feature:2737066-2737740:1:exon

XP_042298329.1
type: Protein
SIO_000068: ncbiprotein

position:2732182:1
position: 2732182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2737740:1
position: 2737740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2732182-2732265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2733748-2733945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2737066-2737740:1:exon

ORAI2
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: ORAI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2742797..2748712)
location: region:2742797-2748712:-1
so has part: feature:2742797-2748712:-1:exon
subclass of: SO_0000010

121916871
type: Gene
SIO_000068: ncbigene

position:2742797:-1
position: 2742797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748712:-1
position: 2748712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2742797-2748712:-1:exon

ORAI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: ORAI2
product: ORAI calcium release-activated calcium modulator 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_042442396.1
SIO_010081: ORAI2
subclass of: SO_0000673
so part of: ORAI2
location: complement(join(2742797..2745848,2746698..2747050,2748567..2748712))
location: region:2742797-2748712:-1
so has part: feature:2748567-2748712:-1:exon
so has part: feature:2746698-2747050:-1:exon
so has part: feature:2742797-2745848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2748567-2748712:-1:exon

position:2748567:-1
position: 2748567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2746698-2747050:-1:exon

position:2746698:-1
position: 2746698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2747050:-1
position: 2747050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2742797-2745848:-1:exon

position:2745848:-1
position: 2745848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ORAI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: ORAI2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein orai-2
translation: MSTELNIPVDPPASACCSEPPAKGMDYRDWVRRSYLELVTSNHHSVQALSWRKLYLSRAKLKASSRTSALLSGFAMVAMVEVQLEMQYQYPPLLLIAFSACTTILVAVHLFALLISTCILPNVEAVSNIHNLNSISESPHERMHPYIELAWGFSTVLGILLFLAEVVLLCWIKFLPVDSILKNDTTLIQQTSQHTGWQAALISTIIMVPVGIIFVVFTIHFYRSLVRHKTERHNREIEELHKLKVQLDGHDRGLQVV
SIO_010081: ORAI2
subclass of: SO_0000673
so part of: ORAI2
location: complement(join(2745302..2745848,2746698..2746925))
location: region:2745302-2746925:-1
so has part: feature:2746698-2746925:-1:exon
so has part: feature:2745302-2745848:-1:exon

XP_042298330.1
type: Protein
SIO_000068: ncbiprotein

position:2745302:-1
position: 2745302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746925:-1
position: 2746925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746698-2746925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2745302-2745848:-1:exon

PRKRIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: PRKRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2756417..2763068)
location: region:2756417-2763068:-1
so has part: feature:2756417-2763068:-1:exon
subclass of: SO_0000010

121917134
type: Gene
SIO_000068: ncbigene

position:2756417:-1
position: 2756417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2763068:-1
position: 2763068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2756417-2763068:-1:exon

PRKRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: PRKRIP1
product: PRKR interacting protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442854.1
SIO_010081: PRKRIP1
subclass of: SO_0000673
so part of: PRKRIP1
location: complement(join(2756417..2757110,2758618..2758685,2759350..2759435,2759665..2759765,2760962..2761040,2762903..2763068))
location: region:2756417-2763068:-1
so has part: feature:2762903-2763068:-1:exon
so has part: feature:2760962-2761040:-1:exon
so has part: feature:2759665-2759765:-1:exon
so has part: feature:2759350-2759435:-1:exon
so has part: feature:2758618-2758685:-1:exon
so has part: feature:2756417-2757110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2762903-2763068:-1:exon

position:2762903:-1
position: 2762903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2760962-2761040:-1:exon

position:2760962:-1
position: 2760962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2761040:-1
position: 2761040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2759665-2759765:-1:exon

position:2759665:-1
position: 2759665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759765:-1
position: 2759765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2759350-2759435:-1:exon

position:2759350:-1
position: 2759350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759435:-1
position: 2759435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2758618-2758685:-1:exon

position:2758618:-1
position: 2758618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2758685:-1
position: 2758685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2756417-2757110:-1:exon

position:2757110:-1
position: 2757110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRKRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: PRKRIP1
product: PRKR interacting protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442853.1
SIO_010081: PRKRIP1
subclass of: SO_0000673
so part of: PRKRIP1
location: complement(join(2756417..2757113,2758618..2758685,2759350..2759435,2759665..2759765,2760962..2761040,2762903..2763066))
location: region:2756417-2763066:-1
so has part: feature:2762903-2763066:-1:exon
so has part: feature:2760962-2761040:-1:exon
so has part: feature:2759665-2759765:-1:exon
so has part: feature:2759350-2759435:-1:exon
so has part: feature:2758618-2758685:-1:exon
so has part: feature:2756417-2757113:-1:exon

position:2763066:-1
position: 2763066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2762903-2763066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2760962-2761040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2759665-2759765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2759350-2759435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2758618-2758685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2756417-2757113:-1:exon

position:2757113:-1
position: 2757113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRKRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: PRKRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRKR-interacting protein 1 isoform X2
translation: MAAGTTRPSRPRKEPQPLVIPRSAAEEQRLKLERLMRNPDKTVPIPEKLNEWSPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQKLDEEYQKKLEKNKMVAEEQTAKRRKKRQKLKEKKLLAKKSKLEQKSENAADSNPSPKQQTSEEEDEEVSEEEEEEKDDAEEPSFVTKR
SIO_010081: PRKRIP1
subclass of: SO_0000673
so part of: PRKRIP1
location: complement(join(2756992..2757110,2758618..2758685,2759350..2759435,2759665..2759765,2760962..2761040,2762903..2763019))
location: region:2756992-2763019:-1
so has part: feature:2762903-2763019:-1:exon
so has part: feature:2760962-2761040:-1:exon
so has part: feature:2759665-2759765:-1:exon
so has part: feature:2759350-2759435:-1:exon
so has part: feature:2758618-2758685:-1:exon
so has part: feature:2756992-2757110:-1:exon

XP_042298788.1
type: Protein
SIO_000068: ncbiprotein

position:2756992:-1
position: 2756992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2763019:-1
position: 2763019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2762903-2763019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2760962-2761040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2759665-2759765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2759350-2759435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2758618-2758685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2756992-2757110:-1:exon

PRKRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: PRKRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRKR-interacting protein 1 isoform X1
translation: MAAGTTRPSRPRKEPQPLVIPRSAAEEQRLKLERLMRNPDKTVPIPEKLNEWSPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQKLDEEYQKKLEKNKMVAEEQTAKRRKKRQKLKEKKLLAKKSKLEQKSENAAADSNPSPKQQTSEEEDEEVSEEEEEEKDDAEEPSFVTKR
SIO_010081: PRKRIP1
subclass of: SO_0000673
so part of: PRKRIP1
location: complement(join(2756992..2757113,2758618..2758685,2759350..2759435,2759665..2759765,2760962..2761040,2762903..2763019))
location: region:2756992-2763019:-1
so has part: feature:2762903-2763019:-1:exon
so has part: feature:2760962-2761040:-1:exon
so has part: feature:2759665-2759765:-1:exon
so has part: feature:2759350-2759435:-1:exon
so has part: feature:2758618-2758685:-1:exon
so has part: feature:2756992-2757113:-1:exon

XP_042298787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2762903-2763019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2760962-2761040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2759665-2759765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2759350-2759435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2758618-2758685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2756992-2757113:-1:exon

SH2B2
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: SH2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2770224..2804809)
location: region:2770224-2804809:-1
so has part: feature:2770224-2804809:-1:exon
subclass of: SO_0000010

121917065
type: Gene
SIO_000068: ncbigene

position:2770224:-1
position: 2770224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2804809:-1
position: 2804809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2770224-2804809:-1:exon

SH2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SH2B2
product: SH2B adaptor protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442700.1
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2770224..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789215,2804682..2804809))
location: region:2770224-2804809:-1
so has part: feature:2804682-2804809:-1:exon
so has part: feature:2788331-2789215:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2770224-2772278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2804682-2804809:-1:exon

position:2804682:-1
position: 2804682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2788331-2789215:-1:exon

position:2788331:-1
position: 2788331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2789215:-1
position: 2789215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2785228-2785329:-1:exon

position:2785228:-1
position: 2785228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2785329:-1
position: 2785329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2782476-2782567:-1:exon

position:2782476:-1
position: 2782476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2782567:-1
position: 2782567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2779481-2779575:-1:exon

position:2779481:-1
position: 2779481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2779575:-1
position: 2779575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2778681-2778869:-1:exon

position:2778681:-1
position: 2778681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2778869:-1
position: 2778869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2775954-2776147:-1:exon

position:2775954:-1
position: 2775954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2776147:-1
position: 2776147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2773352-2773523:-1:exon

position:2773352:-1
position: 2773352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2773523:-1
position: 2773523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2770224-2772278:-1:exon

position:2772278:-1
position: 2772278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SH2B2
product: SH2B adaptor protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_042442703.1
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2770225..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789215,2803238..2803445))
location: region:2770225-2803445:-1
so has part: feature:2803238-2803445:-1:exon
so has part: feature:2788331-2789215:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2770225-2772278:-1:exon

position:2770225:-1
position: 2770225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2803445:-1
position: 2803445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803238-2803445:-1:exon

position:2803238:-1
position: 2803238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2788331-2789215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2785228-2785329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2782476-2782567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2779481-2779575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2778681-2778869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2775954-2776147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2773352-2773523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2770225-2772278:-1:exon

SH2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SH2B2
product: SH2B adaptor protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042442704.1
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2770225..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789215,2799420..2799438))
location: region:2770225-2799438:-1
so has part: feature:2799420-2799438:-1:exon
so has part: feature:2788331-2789215:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2770225-2772278:-1:exon

position:2799438:-1
position: 2799438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2799420-2799438:-1:exon

position:2799420:-1
position: 2799420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2788331-2789215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2785228-2785329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2782476-2782567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2779481-2779575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2778681-2778869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2775954-2776147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2773352-2773523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2770225-2772278:-1:exon

SH2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: SH2B2
product: SH2B adaptor protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_042442699.1
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2770225..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789452))
location: region:2770225-2789452:-1
so has part: feature:2788331-2789452:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2770225-2772278:-1:exon

position:2789452:-1
position: 2789452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2788331-2789452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2785228-2785329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2782476-2782567:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779481-2779575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2778681-2778869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2775954-2776147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2773352-2773523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2770225-2772278:-1:exon

SH2B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SH2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2 isoform X2
translation: MFACPAHLKFAGRGNGPVMNGDAVCQEPPSQLPDWREFCEVHAQAAAVDFAQKFCQFLKENPHYDTPGAETSFSHHFAANFLDIFSLEVNRVFVSNSPTKYNIVPFVGLQNCHMPYGRELLPRKEQTSTESLDSMDNQVTAGRYLSQSQQVQARKVSSYGQSRSSEDVSVHSNSKPKFKKGFSLRNMSLCVVDGMKEMWHRRSSPEPGAEATQSRRSDREPCPAGNKEHNDSREKWTHKLRLSKGQSSKVDLVDIQREGTLRYMVADDTNCVGSSQWQKCRLMLRKAVKMEGERFLLEFYVPPKASKAKVSIPLSAIIEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCTQGACLPSRVSSCSCEFLADDVSRFQDRCASSAAPPDATPNAATVITAPHSRSRDSMGEYRAHVPLENFLQTLDSPATGSHAAGEESETEAEVNLLDFPWFHGTLSRVKAAQLVLFGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSLNETGQCHVQHLWFQTIFDMLRHFHTHPIPLESGGSADITLRSYVVAQSPLPDVSPSSAVASQQPLCRNDLQSQHYFSSFVPVTFQPASPSEGTTSSSSSSASHSLYHRMEGTLSARSRSNSTERLFDSSAVGAEDYHESEGSRSRTRAVENQYSFY
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2771962..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789215,2804682..2804708))
location: region:2771962-2804708:-1
so has part: feature:2804682-2804708:-1:exon
so has part: feature:2788331-2789215:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2771962-2772278:-1:exon

XP_042298634.1
type: Protein
SIO_000068: ncbiprotein

position:2771962:-1
position: 2771962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2804708:-1
position: 2804708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2804682-2804708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2788331-2789215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2785228-2785329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2782476-2782567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2779481-2779575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2778681-2778869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2775954-2776147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2773352-2773523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2771962-2772278:-1:exon

SH2B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SH2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2 isoform X1
translation: MGWREGCLLVLSACLSPSLSFLFGQFAGRGNGPVMNGDAVCQEPPSQLPDWREFCEVHAQAAAVDFAQKFCQFLKENPHYDTPGAETSFSHHFAANFLDIFSLEVNRVFVSNSPTKYNIVPFVGLQNCHMPYGRELLPRKEQTSTESLDSMDNQVTAGRYLSQSQQVQARKVSSYGQSRSSEDVSVHSNSKPKFKKGFSLRNMSLCVVDGMKEMWHRRSSPEPGAEATQSRRSDREPCPAGNKEHNDSREKWTHKLRLSKGQSSKVDLVDIQREGTLRYMVADDTNCVGSSQWQKCRLMLRKAVKMEGERFLLEFYVPPKASKAKVSIPLSAIIEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCTQGACLPSRVSSCSCEFLADDVSRFQDRCASSAAPPDATPNAATVITAPHSRSRDSMGEYRAHVPLENFLQTLDSPATGSHAAGEESETEAEVNLLDFPWFHGTLSRVKAAQLVLFGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSLNETGQCHVQHLWFQTIFDMLRHFHTHPIPLESGGSADITLRSYVVAQSPLPDVSPSSAVASQQPLCRNDLQSQHYFSSFVPVTFQPASPSEGTTSSSSSSASHSLYHRMEGTLSARSRSNSTERLFDSSAVGAEDYHESEGSRSRTRAVENQYSFY
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2771962..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789290))
location: region:2771962-2789290:-1
so has part: feature:2788331-2789290:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2771962-2772278:-1:exon

XP_042298633.1
type: Protein
SIO_000068: ncbiprotein

position:2789290:-1
position: 2789290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2788331-2789290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2785228-2785329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2782476-2782567:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779481-2779575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2778681-2778869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2775954-2776147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2773352-2773523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2771962-2772278:-1:exon

SH2B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SH2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2 isoform X3
translation: MNGDAVCQEPPSQLPDWREFCEVHAQAAAVDFAQKFCQFLKENPHYDTPGAETSFSHHFAANFLDIFSLEVNRVFVSNSPTKYNIVPFVGLQNCHMPYGRELLPRKEQTSTESLDSMDNQVTAGRYLSQSQQVQARKVSSYGQSRSSEDVSVHSNSKPKFKKGFSLRNMSLCVVDGMKEMWHRRSSPEPGAEATQSRRSDREPCPAGNKEHNDSREKWTHKLRLSKGQSSKVDLVDIQREGTLRYMVADDTNCVGSSQWQKCRLMLRKAVKMEGERFLLEFYVPPKASKAKVSIPLSAIIEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCTQGACLPSRVSSCSCEFLADDVSRFQDRCASSAAPPDATPNAATVITAPHSRSRDSMGEYRAHVPLENFLQTLDSPATGSHAAGEESETEAEVNLLDFPWFHGTLSRVKAAQLVLFGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSLNETGQCHVQHLWFQTIFDMLRHFHTHPIPLESGGSADITLRSYVVAQSPLPDVSPSSAVASQQPLCRNDLQSQHYFSSFVPVTFQPASPSEGTTSSSSSSASHSLYHRMEGTLSARSRSNSTERLFDSSAVGAEDYHESEGSRSRTRAVENQYSFY
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2771962..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789188))
location: region:2771962-2789188:-1
so has part: feature:2788331-2789188:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2771962-2772278:-1:exon

XP_042298637.1
type: Protein
SIO_000068: ncbiprotein

position:2789188:-1
position: 2789188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2788331-2789188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2785228-2785329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2782476-2782567:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779481-2779575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2778681-2778869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2775954-2776147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2773352-2773523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2771962-2772278:-1:exon

SH2B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: SH2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2 isoform X3
translation: MNGDAVCQEPPSQLPDWREFCEVHAQAAAVDFAQKFCQFLKENPHYDTPGAETSFSHHFAANFLDIFSLEVNRVFVSNSPTKYNIVPFVGLQNCHMPYGRELLPRKEQTSTESLDSMDNQVTAGRYLSQSQQVQARKVSSYGQSRSSEDVSVHSNSKPKFKKGFSLRNMSLCVVDGMKEMWHRRSSPEPGAEATQSRRSDREPCPAGNKEHNDSREKWTHKLRLSKGQSSKVDLVDIQREGTLRYMVADDTNCVGSSQWQKCRLMLRKAVKMEGERFLLEFYVPPKASKAKVSIPLSAIIEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCTQGACLPSRVSSCSCEFLADDVSRFQDRCASSAAPPDATPNAATVITAPHSRSRDSMGEYRAHVPLENFLQTLDSPATGSHAAGEESETEAEVNLLDFPWFHGTLSRVKAAQLVLFGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSLNETGQCHVQHLWFQTIFDMLRHFHTHPIPLESGGSADITLRSYVVAQSPLPDVSPSSAVASQQPLCRNDLQSQHYFSSFVPVTFQPASPSEGTTSSSSSSASHSLYHRMEGTLSARSRSNSTERLFDSSAVGAEDYHESEGSRSRTRAVENQYSFY
SIO_010081: SH2B2
subclass of: SO_0000673
so part of: SH2B2
location: complement(join(2771962..2772278,2773352..2773523,2775954..2776147,2778681..2778869,2779481..2779575,2782476..2782567,2785228..2785329,2788331..2789188))
location: region:2771962-2789188:-1
so has part: feature:2788331-2789188:-1:exon
so has part: feature:2785228-2785329:-1:exon
so has part: feature:2782476-2782567:-1:exon
so has part: feature:2779481-2779575:-1:exon
so has part: feature:2778681-2778869:-1:exon
so has part: feature:2775954-2776147:-1:exon
so has part: feature:2773352-2773523:-1:exon
so has part: feature:2771962-2772278:-1:exon

XP_042298638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2788331-2789188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2785228-2785329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2782476-2782567:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779481-2779575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2778681-2778869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2775954-2776147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2773352-2773523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2771962-2772278:-1:exon

CUX1
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: CUX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2817022..3071625)
location: region:2817022-3071625:-1
so has part: feature:2817022-3071625:-1:exon
subclass of: SO_0000010

121917064
type: Gene
SIO_000068: ncbigene

position:2817022:-1
position: 2817022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3071625:-1
position: 3071625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2817022-3071625:-1:exon

CUX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: CUX1
product: cut like homeobox 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442697.1
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2817022..2817894,2818050..2818114,2818901..2818981,2820379..2820435,2821266..2821349,2822362..2822478,2823759..2823871,2824469..2824535,2825266..2825402,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071615))
location: region:2817022-3071615:-1
so has part: feature:3071452-3071615:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2825266-2825402:-1:exon
so has part: feature:2824469-2824535:-1:exon
so has part: feature:2823759-2823871:-1:exon
so has part: feature:2822362-2822478:-1:exon
so has part: feature:2821266-2821349:-1:exon
so has part: feature:2820379-2820435:-1:exon
so has part: feature:2818901-2818981:-1:exon
so has part: feature:2818050-2818114:-1:exon
so has part: feature:2817022-2817894:-1:exon

position:3071615:-1
position: 3071615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071615:-1:exon

position:3071452:-1
position: 3071452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

position:3006515:-1
position: 3006515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006625:-1
position: 3006625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

position:2951981:-1
position: 2951981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952028:-1
position: 2952028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

position:2940399:-1
position: 2940399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940477:-1
position: 2940477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

position:2928849:-1
position: 2928849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928986:-1
position: 2928986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

position:2923718:-1
position: 2923718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2923841:-1
position: 2923841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

position:2922435:-1
position: 2922435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2922511:-1
position: 2922511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

position:2921615:-1
position: 2921615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2921681:-1
position: 2921681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

position:2901792:-1
position: 2901792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901840:-1
position: 2901840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

position:2898871:-1
position: 2898871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898975:-1
position: 2898975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

position:2897239:-1
position: 2897239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2897427:-1
position: 2897427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

position:2894530:-1
position: 2894530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894588:-1
position: 2894588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

position:2892130:-1
position: 2892130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2892178:-1
position: 2892178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

position:2889986:-1
position: 2889986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2890085:-1
position: 2890085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2825266-2825402:-1:exon

position:2825266:-1
position: 2825266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2825402:-1
position: 2825402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2824469-2824535:-1:exon

position:2824469:-1
position: 2824469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2824535:-1
position: 2824535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2823759-2823871:-1:exon

position:2823759:-1
position: 2823759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2823871:-1
position: 2823871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2822362-2822478:-1:exon

position:2822362:-1
position: 2822362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2822478:-1
position: 2822478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2821266-2821349:-1:exon

position:2821266:-1
position: 2821266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2821349:-1
position: 2821349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2820379-2820435:-1:exon

position:2820379:-1
position: 2820379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2820435:-1
position: 2820435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2818901-2818981:-1:exon

position:2818901:-1
position: 2818901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2818981:-1
position: 2818981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2818050-2818114:-1:exon

position:2818050:-1
position: 2818050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2818114:-1
position: 2818114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2817022-2817894:-1:exon

position:2817894:-1
position: 2817894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CUX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: CUX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X4
translation: MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERMLQETQNSTATKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEETTAKSDEIEMIMTDLERANQRAEVAQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEAELAAKEREIAQLVEDVQRLQGNLTKLRENSTCQISQLEQQLTAKNSTLKQLEEKLKVQADYDEVKKELNILKSMEFAPSDGSSTQDAASKPLEVLLLEKNRLLQSENATLRITNSDLSGRCADLQIQFTEAVSTVAEQKELIAKLEQDLSTIQSLSATHRPDAEGAAIQNLENIPEPIKEATALFYGYPPSPTSQIPEGQMDSLLAIISSQRERFRTRNRELEAENRLMQHTMQALQSELDSLRADNIKLYEKIKFLQSYPGRGGGSDDTELRYSSQYEERLDPFTSFSRKERQRKYLSLSPWDKATLGMGRLILSNKTARTVAFFYTLFLHLLVFLVLYKTAWSESVGRDCAAYCAKKYADHFHQFHRNDDNGNLWQ
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2817834..2817894,2818050..2818114,2818901..2818981,2820379..2820435,2821266..2821349,2822362..2822478,2823759..2823871,2824469..2824535,2825266..2825402,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071514))
location: region:2817834-3071514:-1
so has part: feature:3071452-3071514:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2825266-2825402:-1:exon
so has part: feature:2824469-2824535:-1:exon
so has part: feature:2823759-2823871:-1:exon
so has part: feature:2822362-2822478:-1:exon
so has part: feature:2821266-2821349:-1:exon
so has part: feature:2820379-2820435:-1:exon
so has part: feature:2818901-2818981:-1:exon
so has part: feature:2818050-2818114:-1:exon
so has part: feature:2817834-2817894:-1:exon

XP_042298631.1
type: Protein
SIO_000068: ncbiprotein

position:2817834:-1
position: 2817834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3071514:-1
position: 3071514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2825266-2825402:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2824469-2824535:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2823759-2823871:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2822362-2822478:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2821266-2821349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2820379-2820435:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818901-2818981:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2818050-2818114:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2817834-2817894:-1:exon

LOC121917066
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: LOC121917066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2827606..2850653
location: region:2827606-2850653:1
so has part: feature:2827606-2850653:1:exon
subclass of: SO_0000011

121917066
type: Gene
SIO_000068: ncbigene

position:2827606:1
position: 2827606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850653:1
position: 2850653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2827606-2850653:1:exon

LOC121917066
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8520
nc RNA class: lncRNA
gene: LOC121917066
product: uncharacterized LOC121917066
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006100949.1
SIO_010081: LOC121917066
subclass of: SO_0000673
so part of: LOC121917066
location: join(2827606..2827727,2849572..2849753,2850416..2850653)
location: region:2827606-2850653:1
so has part: feature:2827606-2827727:1:exon
so has part: feature:2849572-2849753:1:exon
so has part: feature:2850416-2850653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2827606-2827727:1:exon

position:2827727:1
position: 2827727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2849572-2849753:1:exon

position:2849572:1
position: 2849572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2849753:1
position: 2849753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2850416-2850653:1:exon

position:2850416:1
position: 2850416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CUX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: CUX1
product: cut like homeobox 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442698.1
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2845530..2846971,2847461..2847725,2849541..2849729,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071625))
location: region:2845530-3071625:-1
so has part: feature:3071452-3071625:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2845530-2846971:-1:exon

position:2845530:-1
position: 2845530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

position:2888186:-1
position: 2888186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888857:-1
position: 2888857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2878841-2878942:-1:exon

position:2878841:-1
position: 2878841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2878942:-1
position: 2878942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2875311-2876143:-1:exon

position:2875311:-1
position: 2875311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2876143:-1
position: 2876143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2873581-2873746:-1:exon

position:2873581:-1
position: 2873581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873746:-1
position: 2873746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2871869-2871925:-1:exon

position:2871869:-1
position: 2871869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871925:-1
position: 2871925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2858365-2858670:-1:exon

position:2858365:-1
position: 2858365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2858670:-1
position: 2858670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2849541-2849729:-1:exon

position:2849541:-1
position: 2849541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849729:-1
position: 2849729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2847461-2847725:-1:exon

position:2847461:-1
position: 2847461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2847725:-1
position: 2847725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2845530-2846971:-1:exon

position:2846971:-1
position: 2846971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CUX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: CUX1
product: cut like homeobox 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442696.1
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2845530..2846971,2847461..2847725,2849541..2849729,2855306..2855368,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071625))
location: region:2845530-3071625:-1
so has part: feature:3071452-3071625:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2855306-2855368:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2845530-2846971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2878841-2878942:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2875311-2876143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2873581-2873746:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2871869-2871925:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2858365-2858670:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2855306-2855368:-1:exon

position:2855306:-1
position: 2855306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2855368:-1
position: 2855368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2849541-2849729:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2847461-2847725:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2845530-2846971:-1:exon

CUX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: CUX1
product: cut like homeobox 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442695.1
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2845530..2846971,2847461..2847725,2849541..2849729,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2884800..2884865,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071625))
location: region:2845530-3071625:-1
so has part: feature:3071452-3071625:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2884800-2884865:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2845530-2846971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2884800-2884865:-1:exon

position:2884800:-1
position: 2884800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2884865:-1
position: 2884865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2878841-2878942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2875311-2876143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2873581-2873746:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2871869-2871925:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2858365-2858670:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2849541-2849729:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2847461-2847725:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2845530-2846971:-1:exon

CUX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: CUX1
product: cut like homeobox 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442694.1
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2845530..2846971,2847461..2847725,2849541..2849729,2855306..2855368,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2884800..2884865,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071625))
location: region:2845530-3071625:-1
so has part: feature:3071452-3071625:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2884800-2884865:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2855306-2855368:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2845530-2846971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2884800-2884865:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2878841-2878942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2875311-2876143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2873581-2873746:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2871869-2871925:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2858365-2858670:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2855306-2855368:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2849541-2849729:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2847461-2847725:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2845530-2846971:-1:exon

CUX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: CUX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X5
translation: MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERMLQETQNSTATKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEETTAKSDEIEMIMTDLERANQRAEVAQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEAELAAKEREIAQLVEDVQRLQGNLTKLRENSTCQISQLEQQLTAKNSTLKQLEEKLKVQADYDEVKKELNILKSMEFAPSDGSSTQDAASKPLEVLLLEKNRLLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPPQLPRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASSGLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSAGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSASEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRATEASSDEAIKSILEQAKRELQVQKTAEPSQPPSTSSSGGSDDAIRSILQQARREMEAQQAALEPALKATPLTQAEMSLLSPKLIPTPALSSVPSYSPLAMSLKKHSSSSADSSVSSLQALPGLKKETPETPVLDLHGISDSTQGMLRHVKNELGRSGVWKDHWWNTVQPDRRSTAPPEDPKVEEAASGKEKSCSQTRSDRSQQLQGPSSSEYWKEWPNAESPYSQSSELSVTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPSQGQPSGQVLHSVSSLQDPLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKEGKLQESSEPSSAGDSQSTTPLPLSGHSSLSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPSESTSSGIDYSQGASPQAQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGGQGQVGASDSPSARSSRAVHSSEGDSCDGVDADGPPDGKQGGLESDEYSNATTKSQGGRAASAFEAGEEALRDAGSSEKTETFQPGTESREDTDDEGRLKAPRQSPLPGCRHSGETLGPTPNCAPEEDDASTSTASTSVLPGESLCKSKEESVERIPIVPSTSSTLSAGAQKANSLESLFGFSDASASSACSKNARDNTLRKKKAANLNSIIHRLEKAASREEPVEWEF
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2846236..2846971,2847461..2847725,2849541..2849729,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071514))
location: region:2846236-3071514:-1
so has part: feature:3071452-3071514:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2846236-2846971:-1:exon

XP_042298632.1
type: Protein
SIO_000068: ncbiprotein

position:2846236:-1
position: 2846236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2878841-2878942:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2875311-2876143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2873581-2873746:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2871869-2871925:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2858365-2858670:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2849541-2849729:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2847461-2847725:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2846236-2846971:-1:exon

CUX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: CUX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X3
translation: MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERMLQETQNSTATKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEETTAKSDEIEMIMTDLERANQRAEVAQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEAELAAKEREIAQLVEDVQRLQGNLTKLRENSTCQISQLEQQLTAKNSTLKQLEEKLKVQADYDEVKKELNILKSMEFAPSDGSSTQDAASKPLEVLLLEKNRLLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPPQLPRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASSGLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSAGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSASEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRATEASSDEAIKSILEQAKRELQVQKTAEPSQPPSTSSSGGSDDAIRSILQQARREMEAQQAALEPALKATPLTQAEMSLLSPKLIPTPALSSVPSYSPLAMSLKKHSSSSADSSVSSLQALPGLKKETPETPVLDLHGISDSTQGMLRHVKNELGRSGVWKDHWWNTVQPDRRSTAPPEDPKVEEAASGKEKSCSQTRSDRSQQLQGPSSSEYWKEWPNAESPYSQSSELSVTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPSQGQPSGQVLHSVSSLQDPLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKEGKLQESSEPSSAGDSQSTTPLPLSGHSSLSIQELVAMSPELDTYGITKRVKEVLTDNNLAWLTSPKRSRRGKKCTPNYALGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPSESTSSGIDYSQGASPQAQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGGQGQVGASDSPSARSSRAVHSSEGDSCDGVDADGPPDGKQGGLESDEYSNATTKSQGGRAASAFEAGEEALRDAGSSEKTETFQPGTESREDTDDEGRLKAPRQSPLPGCRHSGETLGPTPNCAPEEDDASTSTASTSVLPGESLCKSKEESVERIPIVPSTSSTLSAGAQKANSLESLFGFSDASASSACSKNARDNTLRKKKAANLNSIIHRLEKAASREEPVEWEF
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2846236..2846971,2847461..2847725,2849541..2849729,2855306..2855368,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071514))
location: region:2846236-3071514:-1
so has part: feature:3071452-3071514:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2855306-2855368:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2846236-2846971:-1:exon

XP_042298630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2878841-2878942:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2875311-2876143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2873581-2873746:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2871869-2871925:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2858365-2858670:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2855306-2855368:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2849541-2849729:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2847461-2847725:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2846236-2846971:-1:exon

CUX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: CUX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X2
translation: MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERMLQETQNSTATKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEETTAKSDEIEMIMTDLERANQRAEVAQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEAELAAKEREIAQLVEDVQRLQGNLTKLRENSTCQISQLEQQLTAKNSTLKQLEEKLKVQADYDEVKKELNILKSMEFAPSDGSSTQDAASKPLEVLLLEKNRLLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPPQLPRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASSGLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSAGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSASEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNGSEGNITTRIRATEASSDEAIKSILEQAKRELQVQKTAEPSQPPSTSSSGGSDDAIRSILQQARREMEAQQAALEPALKATPLTQAEMSLLSPKLIPTPALSSVPSYSPLAMSLKKHSSSSADSSVSSLQALPGLKKETPETPVLDLHGISDSTQGMLRHVKNELGRSGVWKDHWWNTVQPDRRSTAPPEDPKVEEAASGKEKSCSQTRSDRSQQLQGPSSSEYWKEWPNAESPYSQSSELSVTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPSQGQPSGQVLHSVSSLQDPLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKEGKLQESSEPSSAGDSQSTTPLPLSGHSSLSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPSESTSSGIDYSQGASPQAQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGGQGQVGASDSPSARSSRAVHSSEGDSCDGVDADGPPDGKQGGLESDEYSNATTKSQGGRAASAFEAGEEALRDAGSSEKTETFQPGTESREDTDDEGRLKAPRQSPLPGCRHSGETLGPTPNCAPEEDDASTSTASTSVLPGESLCKSKEESVERIPIVPSTSSTLSAGAQKANSLESLFGFSDASASSACSKNARDNTLRKKKAANLNSIIHRLEKAASREEPVEWEF
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2846236..2846971,2847461..2847725,2849541..2849729,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2884800..2884865,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071514))
location: region:2846236-3071514:-1
so has part: feature:3071452-3071514:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2884800-2884865:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2846236-2846971:-1:exon

XP_042298629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2884800-2884865:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2878841-2878942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2875311-2876143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2873581-2873746:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2871869-2871925:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2858365-2858670:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2849541-2849729:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2847461-2847725:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2846236-2846971:-1:exon

CUX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8520
gene: CUX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X1
translation: MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERMLQETQNSTATKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEETTAKSDEIEMIMTDLERANQRAEVAQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEAELAAKEREIAQLVEDVQRLQGNLTKLRENSTCQISQLEQQLTAKNSTLKQLEEKLKVQADYDEVKKELNILKSMEFAPSDGSSTQDAASKPLEVLLLEKNRLLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPPQLPRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASSGLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSAGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSASEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNGSEGNITTRIRATEASSDEAIKSILEQAKRELQVQKTAEPSQPPSTSSSGGSDDAIRSILQQARREMEAQQAALEPALKATPLTQAEMSLLSPKLIPTPALSSVPSYSPLAMSLKKHSSSSADSSVSSLQALPGLKKETPETPVLDLHGISDSTQGMLRHVKNELGRSGVWKDHWWNTVQPDRRSTAPPEDPKVEEAASGKEKSCSQTRSDRSQQLQGPSSSEYWKEWPNAESPYSQSSELSVTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPSQGQPSGQVLHSVSSLQDPLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKEGKLQESSEPSSAGDSQSTTPLPLSGHSSLSIQELVAMSPELDTYGITKRVKEVLTDNNLAWLTSPKRSRRGKKCTPNYALGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPSESTSSGIDYSQGASPQAQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGGQGQVGASDSPSARSSRAVHSSEGDSCDGVDADGPPDGKQGGLESDEYSNATTKSQGGRAASAFEAGEEALRDAGSSEKTETFQPGTESREDTDDEGRLKAPRQSPLPGCRHSGETLGPTPNCAPEEDDASTSTASTSVLPGESLCKSKEESVERIPIVPSTSSTLSAGAQKANSLESLFGFSDASASSACSKNARDNTLRKKKAANLNSIIHRLEKAASREEPVEWEF
SIO_010081: CUX1
subclass of: SO_0000673
so part of: CUX1
location: complement(join(2846236..2846971,2847461..2847725,2849541..2849729,2855306..2855368,2858365..2858670,2871869..2871925,2873581..2873746,2875311..2876143,2878841..2878942,2884800..2884865,2888186..2888857,2889986..2890085,2892130..2892178,2894530..2894588,2897239..2897427,2898871..2898975,2901792..2901840,2921615..2921681,2922435..2922511,2923718..2923841,2928849..2928986,2940399..2940477,2951981..2952028,3006515..3006625,3071452..3071514))
location: region:2846236-3071514:-1
so has part: feature:3071452-3071514:-1:exon
so has part: feature:3006515-3006625:-1:exon
so has part: feature:2951981-2952028:-1:exon
so has part: feature:2940399-2940477:-1:exon
so has part: feature:2928849-2928986:-1:exon
so has part: feature:2923718-2923841:-1:exon
so has part: feature:2922435-2922511:-1:exon
so has part: feature:2921615-2921681:-1:exon
so has part: feature:2901792-2901840:-1:exon
so has part: feature:2898871-2898975:-1:exon
so has part: feature:2897239-2897427:-1:exon
so has part: feature:2894530-2894588:-1:exon
so has part: feature:2892130-2892178:-1:exon
so has part: feature:2889986-2890085:-1:exon
so has part: feature:2888186-2888857:-1:exon
so has part: feature:2884800-2884865:-1:exon
so has part: feature:2878841-2878942:-1:exon
so has part: feature:2875311-2876143:-1:exon
so has part: feature:2873581-2873746:-1:exon
so has part: feature:2871869-2871925:-1:exon
so has part: feature:2858365-2858670:-1:exon
so has part: feature:2855306-2855368:-1:exon
so has part: feature:2849541-2849729:-1:exon
so has part: feature:2847461-2847725:-1:exon
so has part: feature:2846236-2846971:-1:exon

XP_042298628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3071452-3071514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006515-3006625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951981-2952028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940399-2940477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2928849-2928986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923718-2923841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2922435-2922511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921615-2921681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2901792-2901840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2898871-2898975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897239-2897427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2894530-2894588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892130-2892178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2889986-2890085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2888186-2888857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2884800-2884865:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2878841-2878942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2875311-2876143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2873581-2873746:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2871869-2871925:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2858365-2858670:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2855306-2855368:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2849541-2849729:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2847461-2847725:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2846236-2846971:-1:exon

MYL10
type: Gene
subclass of: SO_0000704
RO_0002162: 8520
gene: MYL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3244232..3262484
location: region:3244232-3262484:1
so has part: feature:3244232-3262484:1:exon
subclass of: SO_0000010

121916774
type: Gene
SIO_000068: ncbigene

position:3244232:1
position: 3244232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3262484:1
position: 3262484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3244232-3262484:1:exon

MYL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8520
gene: MYL10
product: myosin light chain 10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042442215.1
SIO_010081: MYL10
subclass of: SO_0000673
so part of: MYL10
location: join(3244232..3244317,3250485..3250574,3251808..3251883,3252352..3252456,3254891..3254969,3260673..3260721,3262250..3262484)
location: region:3244232-3262484:1
so has part: feature:3244232-3244317:1:exon
so has part: feature:3250485-3250574:1:exon
so has part: feature:3251808-3251883:1:exon
so has part: feature:3252352-3252456:1:exon
so has part: feature:3254891-3254969:1:exon
so has part: feature:3260673-3260721:1:exon
so has part: feature:3262250-3262484:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3244232-3244317:1:exon

position:3244317:1
position: 3244317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3250485-3250574:1:exon

position:3250485:1
position: 3250485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3250574:1
position: 3250574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3251808-3251883:1:exon

position:3251808:1
position: 3251808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3251883:1
position: 3251883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3252352-3252456:1:exon

position:3252352:1
position: 3252352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3252456:1
position: 3252456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3254891-3254969:1:exon