Chrysemys picta bellii isolate RCT428 chromosome 20, Chrysemys_picta_BioNano-3.0.4, whole genome shotgun sequence.
type: Entry
definition: Chrysemys picta bellii isolate RCT428 chromosome 20, Chrysemys_picta_BioNano-3.0.4, whole genome shotgun sequence.
sequence version: NC_056659.1
sequence date: 2021-08-10
sequence: sequence
division: CON
label: NC_056659.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210179
dblink: SAMN02713681
keyword: WGS
keyword: RefSeq
source: Chrysemys picta bellii (western painted turtle)
organism: Chrysemys picta bellii
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys.
reference: 1
references: 26108489
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM024788.1.\nAssembly name: Chrysemys_picta_BioNano-3.0.4\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Painted turtle genome\nsequencing consortium on 2020/08/21. The original whole-genome\nshotgun project has the accession AHGY00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Painted turtle genome sequencing\n consortium\nAssembly Method :: Newbler v. 2.6\nAssembly Name :: Chrysemys_picta_BioNano-3.0.4\nGenome Coverage :: 19.2x\nSequencing Technology :: 454 Life Sciences\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chrysemys picta Annotation Release\n 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 16617724
topology: linear
so has quality: SO_0000987
location: 1..16617724
location: region:1-16617724:1
RO_0002162: 8478

NC_056659
type: RefSeq
SIO_000068: refseq

PRJNA210179
type: BioProject
SIO_000068: bioproject

SAMN02713681
type: BioSample
SIO_000068: biosample

1
title: Physical Mapping and Refinement of the Painted Turtle Genome (Chrysemys picta) Inform Amniote Genome Evolution and Challenge Turtle-Bird Chromosomal Conservation
author: Badenhorst, D.
author: Hillier, L.W.
author: Literman, R.
author: Montiel, E.E.
author: Radhakrishnan, S.
author: Shen, Y.
author: Minx, P.
author: Janes, D.E.
author: Warren, W.C.
author: Edwards, S.V.
author: Valenzuela, N.
journal: Genome Biol Evol
volume: 7
issue: 7
pages: 2038-2050
year: 2015
pubmed: 26108489
comments: Publication Status: Online-Only

26108489
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16617724:1
position: 16617724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16617724:1:source
so part of: sequence
organism: Chrysemys picta bellii
mol type: genomic DNA
isolate: RCT428
isolation source: small lake 1.3 miles south of Potholes Reservoir
sub species: bellii
chromosome: 20
sex: female
country: USA: Grant Co., WA

8478
type: Taxonomy
SIO_000068: taxonomy

LOC122174092
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC122174092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<24592..250867)
location: region:24592-250867:-1
so has part: feature:24592-250867:-1:exon
subclass of: SO_0000010

122174092
type: Gene
SIO_000068: ncbigene

position:24592:-1
position: 24592
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:250867:-1
position: 250867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24592-250867:-1:exon

LOC122174092
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC122174092
product: astrotactin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_042854474.1
SIO_010081: LOC122174092
subclass of: SO_0000673
so part of: LOC122174092
location: complement(join(<24592..24699,46755..46904,85327..85711,158347..158534,250424..250867))
location: region:24592-250867:-1
so has part: feature:250424-250867:-1:exon
so has part: feature:158347-158534:-1:exon
so has part: feature:85327-85711:-1:exon
so has part: feature:46755-46904:-1:exon
so has part: feature:24592-24699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250424-250867:-1:exon

position:250424:-1
position: 250424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158347-158534:-1:exon

position:158347:-1
position: 158347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158534:-1
position: 158534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85327-85711:-1:exon

position:85327:-1
position: 85327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85711:-1
position: 85711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:46755-46904:-1:exon

position:46755:-1
position: 46755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46904:-1
position: 46904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24592-24699:-1:exon

position:24699:-1
position: 24699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122174092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC122174092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrotactin-2-like
translation: MAAPPRCSRLRRAAASRSPLQPPPPPPPPAPLLPLLLLLASGPGSSASREPDSPCRVKTVTVSTLPVLRENDISWSGSPPAASAAAPGPSGPGPAAESRLLLFVRNELPGRIAVQDDLDNTELPFFTLEMSGTVADISLVHWKQQWLENGTLYFHVSMSSAEQLSRATPPTLQEPAEIVEEQMHILHISVMGGLIALLLLLLVFTVALYAQRRWHKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRNSRLQAHNSVIGMPIRETPILDDYDFEDEDEVPQRAEPGTREDEFGSQVTRTLESLGRGGEEKPEYEKKAAEATQETVESLMQKFKESFRTNTPIEIGQLQPALRSTSMGRRKRRSRPRGGIGFGRAKGNSGSEADDETQLTFYTEQYRSRRRSK
SIO_010081: LOC122174092
subclass of: SO_0000673
so part of: LOC122174092
location: complement(join(<24592..24699,46755..46904,85327..85711,158347..158534,250424..250808))
location: region:24592-250808:-1
so has part: feature:250424-250808:-1:exon
so has part: feature:158347-158534:-1:exon
so has part: feature:85327-85711:-1:exon
so has part: feature:46755-46904:-1:exon
so has part: feature:24592-24699:-1:exon

XP_042710408.1
type: Protein
SIO_000068: ncbiprotein

position:250808:-1
position: 250808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250424-250808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158347-158534:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85327-85711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46755-46904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24592-24699:-1:exon

LOC101931032
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC101931032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 378626..407195
location: region:378626-407195:1
so has part: feature:378626-407195:1:exon
subclass of: SO_0000010

101931032
type: Gene
SIO_000068: ncbigene

position:378626:1
position: 378626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407195:1
position: 407195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378626-407195:1:exon

LOC101931032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC101931032
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_042854471.1
SIO_010081: LOC101931032
subclass of: SO_0000673
so part of: LOC101931032
location: join(378626..378730,391951..392074,396298..396355,396766..396822,397760..397887,399293..399356,400266..400361,401134..401326,403403..403531,405073..405219,406569..407195)
location: region:378626-407195:1
so has part: feature:378626-378730:1:exon
so has part: feature:391951-392074:1:exon
so has part: feature:396298-396355:1:exon
so has part: feature:396766-396822:1:exon
so has part: feature:397760-397887:1:exon
so has part: feature:399293-399356:1:exon
so has part: feature:400266-400361:1:exon
so has part: feature:401134-401326:1:exon
so has part: feature:403403-403531:1:exon
so has part: feature:405073-405219:1:exon
so has part: feature:406569-407195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378626-378730:1:exon

position:378730:1
position: 378730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391951-392074:1:exon

position:391951:1
position: 391951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392074:1
position: 392074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:396298-396355:1:exon

position:396298:1
position: 396298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396355:1
position: 396355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396766-396822:1:exon

position:396766:1
position: 396766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396822:1
position: 396822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397760-397887:1:exon

position:397760:1
position: 397760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397887:1
position: 397887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:399293-399356:1:exon

position:399293:1
position: 399293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399356:1
position: 399356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:400266-400361:1:exon

position:400266:1
position: 400266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400361:1
position: 400361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:401134-401326:1:exon

position:401134:1
position: 401134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401326:1
position: 401326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:403403-403531:1:exon

position:403403:1
position: 403403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403531:1
position: 403531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405073-405219:1:exon

position:405073:1
position: 405073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405219:1
position: 405219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:406569-407195:1:exon

position:406569:1
position: 406569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101931032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC101931032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like
translation: MNLEGLLCSKSQCRFAWVFLKKLWKVLMLLLSVVLSVRVVQYCGRMMPDVPFEKDINICRKRFAWRKPILGRFEPDWKPFLTSKELFWQDDTPARRQLNDLLHFHRLPFGLNSSVLHAFHTLQLLPQHGMPKSIERLRCRRCVVVGNSNSIRGRGLGAVIDSHNIVIRLNNAPVKEHEEDVGEKTSIRLFFPESALPNPLDNNDSETLMVLIAFKSLDFTWVKEMLLQTRNKTVEGFWRRPPSEWKWNASHLRILHPYVTYEATYKLLQLKKTGGKYSTTGIIALNLALHICHEVNIIGFGYPDKDDNTTPVHYYDTAHLSQGLFMTHNISAEQAWLLKMMERGMISNLMRPSSWSWGP
SIO_010081: LOC101931032
subclass of: SO_0000673
so part of: LOC101931032
location: join(391975..392074,396298..396355,396766..396822,397760..397887,399293..399356,400266..400361,401134..401326,403403..403531,405073..405219,406569..406676)
location: region:391975-406676:1
so has part: feature:391975-392074:1:exon
so has part: feature:396298-396355:1:exon
so has part: feature:396766-396822:1:exon
so has part: feature:397760-397887:1:exon
so has part: feature:399293-399356:1:exon
so has part: feature:400266-400361:1:exon
so has part: feature:401134-401326:1:exon
so has part: feature:403403-403531:1:exon
so has part: feature:405073-405219:1:exon
so has part: feature:406569-406676:1:exon

XP_042710405.1
type: Protein
SIO_000068: ncbiprotein

position:391975:1
position: 391975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406676:1
position: 406676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391975-392074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:396298-396355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396766-396822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397760-397887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399293-399356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400266-400361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401134-401326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:403403-403531:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:405073-405219:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406569-406676:1:exon

TLR4
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: TLR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 412147..419660
location: region:412147-419660:1
so has part: feature:412147-419660:1:exon
subclass of: SO_0000010

101954201
type: Gene
SIO_000068: ncbigene

position:412147:1
position: 412147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419660:1
position: 419660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412147-419660:1:exon

TLR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: TLR4
product: toll like receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005301387.4
SIO_010081: TLR4
subclass of: SO_0000673
so part of: TLR4
location: join(412147..412392,413656..413822,417168..419660)
location: region:412147-419660:1
so has part: feature:412147-412392:1:exon
so has part: feature:413656-413822:1:exon
so has part: feature:417168-419660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412147-412392:1:exon

position:412392:1
position: 412392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413656-413822:1:exon

position:413656:1
position: 413656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413822:1
position: 413822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:417168-419660:1:exon

position:417168:1
position: 417168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: TLR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 4
translation: MFGREALSFSTCFVQSLATLFLSQLMASSLNPCVEETTNITYRCMELNLSGVPDEIPPSTQNLDLSFNPLESLTSNYFSAVPALRFLDLTRCHIQTIEDYAFEDLPNLLTLILTANPLWHLGPKAFYSLTSLQKLVAVEDNISSLADLPIGHLHTLQELNVATNNVDSLKLPKYFSNLTFLRFLSLQSNKISSISIGDLDVLQGEKGLNLTLVLSSNDIKYIQPGSFEGIHLHELSLRACFENTNVMKACIQGLAGLQVHRLVLGEFRNIQRVEDFSNGLLDGLCLVQLQEFVFICFKRFNNGTDTLFDCLGNTSTVRLVDLYLDQVSAVPTASRIHQLECKTCKFSEVPALKLSSFKELRLLRITKSKYLTGFQQKFVDLDNLEVLDLSENRLSFIKCCSFHLGGTPKLKHLNLSFNSIISVSGGLPLHELVSLDFQHSKLDNLGTVPVFVSLGKLIYLDISYTNTHVESQYVFCGLASLQVLKMAGNSFKDNNLGDSFKNLTQLLTLDVSSCKVIQVSLSTFSSLGKLQTLNISHNKLLTFDHPAYKPLQALTVLDFSSNQLTVLTENAQESLPSSLVHLDLSYNLFICSCNHLSFLKWAQEHGELLRSTELMVCISPEHLKNASVLNFDLSSCQLSAVLVAVYVGTALAGAVFLFLIYKYYFNLYYGLVLLSGCRRYADRGDTYDAFVIHSSKDIEWVRKELVETLERGVPPFHLCLHYRDFTPGVPIASNIIHEGFLSSRKVIAVISNHFMESKWCSFEFEIAQSWQFMEGRAGIILIVLEEVDKVLLRRKLGLSRYLKRNTYLEWKDREISRHLFWRQLRTALLDGKTEPGRGGN
SIO_010081: TLR4
subclass of: SO_0000673
so part of: TLR4
location: join(412288..412392,413656..413822,417168..419418)
location: region:412288-419418:1
so has part: feature:412288-412392:1:exon
so has part: feature:413656-413822:1:exon
so has part: feature:417168-419418:1:exon

XP_005301444.1
type: Protein
SIO_000068: ncbiprotein

position:412288:1
position: 412288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419418:1
position: 419418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412288-412392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413656-413822:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417168-419418:1:exon

LOC112059916
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC112059916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(827778..836723)
location: region:827778-836723:-1
so has part: feature:827778-836723:-1:exon
subclass of: SO_0000011

112059916
type: Gene
SIO_000068: ncbigene

position:827778:-1
position: 827778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836723:-1
position: 836723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827778-836723:-1:exon

LOC112059916
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8478
nc RNA class: lncRNA
gene: LOC112059916
product: uncharacterized LOC112059916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002889190.2
SIO_010081: LOC112059916
subclass of: SO_0000673
so part of: LOC112059916
location: complement(join(827778..829061,834650..834914,836570..836723))
location: region:827778-836723:-1
so has part: feature:836570-836723:-1:exon
so has part: feature:834650-834914:-1:exon
so has part: feature:827778-829061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:836570-836723:-1:exon

position:836570:-1
position: 836570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:834650-834914:-1:exon

position:834650:-1
position: 834650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834914:-1
position: 834914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:827778-829061:-1:exon

position:829061:-1
position: 829061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122174089
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC122174089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1016752..1052805)
location: region:1016752-1052805:-1
so has part: feature:1016752-1052805:-1:exon
subclass of: SO_0000011

122174089
type: Gene
SIO_000068: ncbigene

position:1016752:-1
position: 1016752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052805:-1
position: 1052805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016752-1052805:-1:exon

LOC122174089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8478
nc RNA class: lncRNA
gene: LOC122174089
product: uncharacterized LOC122174089
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_006175436.1
SIO_010081: LOC122174089
subclass of: SO_0000673
so part of: LOC122174089
location: complement(join(1016752..1017226,1018555..1018738,1052695..1052805))
location: region:1016752-1052805:-1
so has part: feature:1052695-1052805:-1:exon
so has part: feature:1018555-1018738:-1:exon
so has part: feature:1016752-1017226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052695-1052805:-1:exon

position:1052695:-1
position: 1052695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018555-1018738:-1:exon

position:1018555:-1
position: 1018555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018738:-1
position: 1018738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1016752-1017226:-1:exon

position:1017226:-1
position: 1017226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRINP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: BRINP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1066977..1160881)
location: region:1066977-1160881:-1
so has part: feature:1066977-1160881:-1:exon
subclass of: SO_0000010

101948595
type: Gene
SIO_000068: ncbigene

position:1066977:-1
position: 1066977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160881:-1
position: 1160881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066977-1160881:-1:exon

BRINP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: BRINP1
product: BMP/retinoic acid inducible neural specific 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008170835.3
SIO_010081: BRINP1
subclass of: SO_0000673
so part of: BRINP1
location: complement(join(1066977..1068619,1075350..1075572,1080024..1080260,1091756..1091861,1093225..1093394,1102797..1102987,1134731..1134998,1160084..1160258,1160712..1160881))
location: region:1066977-1160881:-1
so has part: feature:1160712-1160881:-1:exon
so has part: feature:1160084-1160258:-1:exon
so has part: feature:1134731-1134998:-1:exon
so has part: feature:1102797-1102987:-1:exon
so has part: feature:1093225-1093394:-1:exon
so has part: feature:1091756-1091861:-1:exon
so has part: feature:1080024-1080260:-1:exon
so has part: feature:1075350-1075572:-1:exon
so has part: feature:1066977-1068619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1160712-1160881:-1:exon

position:1160712:-1
position: 1160712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160084-1160258:-1:exon

position:1160084:-1
position: 1160084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160258:-1
position: 1160258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1134731-1134998:-1:exon

position:1134731:-1
position: 1134731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134998:-1
position: 1134998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1102797-1102987:-1:exon

position:1102797:-1
position: 1102797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102987:-1
position: 1102987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1093225-1093394:-1:exon

position:1093225:-1
position: 1093225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093394:-1
position: 1093394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1091756-1091861:-1:exon

position:1091756:-1
position: 1091756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091861:-1
position: 1091861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1080024-1080260:-1:exon

position:1080024:-1
position: 1080024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080260:-1
position: 1080260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1075350-1075572:-1:exon

position:1075350:-1
position: 1075350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075572:-1
position: 1075572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1066977-1068619:-1:exon

position:1068619:-1
position: 1068619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRINP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: BRINP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 1
translation: MNWRLVEFLYFLFIWDHIIVQPSHQEPAVTNQHVSKEFDWLISDRGPFHHSRSYLSFVERHRQGFTTRYKIYREFARWKVRNTAIERRDLVRNPVPLMPEFQRSIRLLGRRPTTQQFIDTIIKKYGTHILISATLGGEEALTMYMDKSRLDRKSGNATQSVEALHQLASSYFVDRDGTMRRLHEIQISTGAIKVTETRTGPLGCNSYDNLDSVSSVLLQSTESKLHLQGLQIIFPQYLQEKFVQSALSYIMCNGEGEYVCRNSQCGCQCAEEFPQCNCPITDIQIMEYTLANMGKSWTEAYKDLENSDEFKSFMKRLPNNHFLTIGSIHQHWGNDWDLQNRYKLLQSSMEAQRQKIQRTARKLFGLSVRCRHNPNHQLPRERTIQQWLTRVQSLLYCNENGFWGTFLESQRSCVCHSSTSLCQRPIPCIIGGNNSCAMCSLANISLCGSCNKGYKLYRGRCEPQNVDSERSEQFISFETDLDFQDLELKYLLQKMDSRLYVHTTFISNEIRLDTFFDPRWRKRMSLTLKSNKNRMDFIHMVIGISMRICQMRNSSLDPMFFVYVNPFSGSHSEGWNMPFGEFGYPRWEKIRLQNSQCYNWTLLLGNRWKTFFETVHIYLRSRTRLPSLLRNETGQGPVDLSDPSKRQFYIKISDVQVYGYSLRFNADLLRSAVQQVNQSYTQGGQFYSSSSVMLLLLDIRDRINRLAPPVAPGKPQLDLFSCMLKHRLKLTNSEIIRVNHALDLYNTEILKQSDQMTAKLC
SIO_010081: BRINP1
subclass of: SO_0000673
so part of: BRINP1
location: complement(join(1067479..1068619,1075350..1075572,1080024..1080260,1091756..1091861,1093225..1093394,1102797..1102987,1134731..1134948))
location: region:1067479-1134948:-1
so has part: feature:1134731-1134948:-1:exon
so has part: feature:1102797-1102987:-1:exon
so has part: feature:1093225-1093394:-1:exon
so has part: feature:1091756-1091861:-1:exon
so has part: feature:1080024-1080260:-1:exon
so has part: feature:1075350-1075572:-1:exon
so has part: feature:1067479-1068619:-1:exon

XP_008169057.1
type: Protein
SIO_000068: ncbiprotein

position:1067479:-1
position: 1067479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134948:-1
position: 1134948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134731-1134948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102797-1102987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1093225-1093394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1091756-1091861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080024-1080260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075350-1075572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067479-1068619:-1:exon

CDK5RAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1827294..1931759)
location: region:1827294-1931759:-1
so has part: feature:1827294-1931759:-1:exon
subclass of: SO_0000010

101947314
type: Gene
SIO_000068: ncbigene

position:1827294:-1
position: 1827294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931759:-1
position: 1931759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1827294-1931759:-1:exon

CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854172.1
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827294..1827950,1830206..1830252,1834393..1834531,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931759))
location: region:1827294-1931759:-1
so has part: feature:1931374-1931759:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839750-1839884:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827294-1827950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931759:-1:exon

position:1931374:-1
position: 1931374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

position:1930787:-1
position: 1930787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930854:-1
position: 1930854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

position:1927402:-1
position: 1927402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927469:-1
position: 1927469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

position:1922128:-1
position: 1922128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922238:-1
position: 1922238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

position:1920853:-1
position: 1920853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1920929:-1
position: 1920929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

position:1918847:-1
position: 1918847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918970:-1
position: 1918970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

position:1915938:-1
position: 1915938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916092:-1
position: 1916092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

position:1913436:-1
position: 1913436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1913598:-1
position: 1913598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

position:1911513:-1
position: 1911513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911566:-1
position: 1911566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

position:1910984:-1
position: 1910984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911103:-1
position: 1911103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

position:1910240:-1
position: 1910240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910332:-1
position: 1910332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

position:1907700:-1
position: 1907700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907918:-1
position: 1907918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

position:1901470:-1
position: 1901470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1901640:-1
position: 1901640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

position:1900336:-1
position: 1900336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900509:-1
position: 1900509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

position:1891276:-1
position: 1891276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891373:-1
position: 1891373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

position:1886083:-1
position: 1886083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886213:-1
position: 1886213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

position:1884788:-1
position: 1884788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884903:-1
position: 1884903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

position:1883247:-1
position: 1883247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883375:-1
position: 1883375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

position:1877407:-1
position: 1877407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877499:-1
position: 1877499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

position:1876604:-1
position: 1876604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876651:-1
position: 1876651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

position:1875237:-1
position: 1875237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875427:-1
position: 1875427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

position:1872043:-1
position: 1872043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872502:-1
position: 1872502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

position:1869158:-1
position: 1869158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869413:-1
position: 1869413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

position:1866853:-1
position: 1866853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1866969:-1
position: 1866969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

position:1861944:-1
position: 1861944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1862547:-1
position: 1862547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

position:1858717:-1
position: 1858717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858949:-1
position: 1858949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

position:1856072:-1
position: 1856072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856120:-1
position: 1856120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

position:1854538:-1
position: 1854538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854725:-1
position: 1854725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

position:1853220:-1
position: 1853220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853345:-1
position: 1853345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

position:1847858:-1
position: 1847858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847974:-1
position: 1847974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

position:1845184:-1
position: 1845184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845373:-1
position: 1845373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

position:1844859:-1
position: 1844859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844980:-1
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CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854170.1
SIO_010081: CDK5RAP2
subclass of: SO_0000673
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CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008170834.3
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
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urn:…
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urn:…
SIO_000300: 38
SIO_000628: feature:1827294-1827950:-1:exon

CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854171.1
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
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urn:…
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CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008170832.3
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827294..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839801..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931758))
location: region:1827294-1931758:-1
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839801-1839884:-1:exon

position:1839801:-1
position: 1839801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1836813-1836959:-1:exon

urn:…
SIO_000300: 37
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urn:…
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SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1827294-1827950:-1:exon

CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008170830.3
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827294..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931758))
location: region:1827294-1931758:-1
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1827294-1827950:-1:exon

CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008170831.3
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827294..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872499,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931757))
location: region:1827294-1931757:-1
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position:1931757:-1
position: 1931757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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position:1872499:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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urn:…
SIO_000300: 37
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1827294-1827950:-1:exon

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X4
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIESLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESSRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQGSANIFIHGSEQYNSLTSEIHFLRKQNQVLNVMLAKGSRDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTDILDPGHEEFRKDQNNPLDLHELLTEIQSLRVQLERSIETNKTLHEKWEEQLSKEKREEAASVSAVNINYLLKRDSQHYTGMNEVGHKFSAPSSNVCELQNRGHGTSPGKAGTPKDKNTINKQMFCISEIQLAAKEDLDSSSRCSSSSSTGTSCTPRLVPGHRMWADKNGRHILGLIEDYNALRKQISEGQKLVSEMEAPLREMTGMKNLEPGVKVPDQESLHIFSANIHTVQQNLEEAARLLKLLWRVSLPLKVVHSTAHCSQDEGMKAEILRLHKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLALTHDVLKKARGNLEVQPAENQKAASHTNKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827891..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1827891-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839750-1839884:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1836813-1836959:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827891-1827950:-1:exon

XP_042710104.1
type: Protein
SIO_000068: ncbiprotein

position:1827891:-1
position: 1827891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931426:-1
position: 1931426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1839750-1839884:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1836813-1836959:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1827891-1827950:-1:exon

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X2
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIEAIKMELRNEKNCFEKKIQSLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQGSANIFIHGSEQYNSLTSEIHFLRKQNQVLNVMLAKGSRDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTDILDPGHEEFRKDQNNPLDLHELLTEIQSLRVQLERSIETNKTLHEKWEEQLSKEKREEAASVSAVNINYLLKRDSQHYTGMNEVGHKFSAPSSNVCELQNRGHGTSPGKAGTPKDKNTINKQMFCISEIQLAAKEDLDSSSRCSSSSSTGTSCTPRLVPGHRMWADKNGRHILGLIEDYNALRKQISEGQKLVSEMEAPLREMTGMKNLEPGVKVPDQESLHIFSANIHTVQQNLEEAARLLKLLWRVSLPLKVVHSTAHCSQDEGMKAEILRLHKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLALTHDVLKKARGNLEVQPAENQKAASHTNKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827891..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872499,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1827891-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872499:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839750-1839884:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1836813-1836959:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827891-1827950:-1:exon

XP_008169053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872499:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839750-1839884:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1836813-1836959:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1827891-1827950:-1:exon

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X5
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIEAIKMELRNEKNCFEKKIQSLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESSRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTDILDPGHEEFRKDQNNPLDLHELLTEIQSLRVQLERSIETNKTLHEKWEEQLSKEKREEAASVSAVNINYLLKRDSQHYTGMNEVGHKFSAPSSNVCELQNRGHGTSPGKAGTPKDKNTINKQMFCISEIQLAAKEDLDSSSRCSSSSSTGTSCTPRLVPGHRMWADKNGRHILGLIEDYNALRKQISEGQKLVSEMEAPLREMTGMKNLEPGVKVPDQESLHIFSANIHTVQQNLEEAARLLKLLWRVSLPLKVVHSTAHCSQDEGMKAEILRLHKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLALTHDVLKKARGNLEVQPAENQKAASHTNKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827891..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1827891-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839750-1839884:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1836813-1836959:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827891-1827950:-1:exon

XP_008169056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1839750-1839884:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1836813-1836959:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1827891-1827950:-1:exon

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X6
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIEAIKMELRNEKNCFEKKIQSLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESSRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQGSANIFIHGSEQYNSLTSEIHFLRKQNQVLNVMLAKGSRDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTDILDPGHEEFRKDQNNPLDLHELLTEIQSLRVQLERSIETNKTLHEKWEEQLSKEKREEAASVSAVNINYLLKRDSQHYTGMNEIQLAAKEDLDSSSRCSSSSSTGTSCTPRLVPGHRMWADKNGRHILGLIEDYNALRKQISEGQKLVSEMEAPLREMTGMKNLEPGVKVPDQESLHIFSANIHTVQQNLEEAARLLKLLWRVSLPLKVVHSTAHCSQDEGMKAEILRLHKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLALTHDVLKKARGNLEVQPAENQKAASHTNKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827891..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1827891-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1836813-1836959:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827891-1827950:-1:exon

XP_042710105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1836813-1836959:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1827891-1827950:-1:exon

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X3
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIEAIKMELRNEKNCFEKKIQSLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESSRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQGSANIFIHGSEQYNSLTSEIHFLRKQNQVLNVMLAKGSRDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTDILDPGHEEFRKDQNNPLDLHELLTEIQSLRVQLERSIETNKTLHEKWEEQLSKEKREEAASVSAVNINYLLKRDSQHYTGMNEVGHKFSAPSSNVCELQNRGHGTSPGKAEIQLAAKEDLDSSSRCSSSSSTGTSCTPRLVPGHRMWADKNGRHILGLIEDYNALRKQISEGQKLVSEMEAPLREMTGMKNLEPGVKVPDQESLHIFSANIHTVQQNLEEAARLLKLLWRVSLPLKVVHSTAHCSQDEGMKAEILRLHKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLALTHDVLKKARGNLEVQPAENQKAASHTNKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827891..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839801..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1827891-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839801-1839884:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1836813-1836959:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827891-1827950:-1:exon

XP_008169054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839801-1839884:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1836813-1836959:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1827891-1827950:-1:exon

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X7
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIEAIKMELRNEKNCFEKKIQSLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESSRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQGSANIFIHGSEQYNSLTSEIHFLRKQNQVLNVMLAKGSRDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTDILDPGHEEFRKDQNNPLDLHELLTEIQSLRVQLERSIETNKTLHEKWEEQLSKEKREEAASVSAVNINYLLKRDSQHYTGMNEVGHKFSAPSSNVCELQNRGHGTSPGKAGTPKDKNTINKQMFCISEIQLAAKEDLDSSSRCSSSSSTGTSCTPRLVPGHRMWADKNGRHILGLIEDYNALRKQISEGQKLVSEMEAPLREMTGMKNLEPGVKDEGMKAEILRLHKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLALTHDVLKKARGNLEVQPAENQKAASHTNKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827891..1827950,1830206..1830252,1834393..1834531,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1827891-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839750-1839884:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827891-1827950:-1:exon

XP_042710106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839750-1839884:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1827891-1827950:-1:exon

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X1
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIEAIKMELRNEKNCFEKKIQSLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESSRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQGSANIFIHGSEQYNSLTSEIHFLRKQNQVLNVMLAKGSRDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTDILDPGHEEFRKDQNNPLDLHELLTEIQSLRVQLERSIETNKTLHEKWEEQLSKEKREEAASVSAVNINYLLKRDSQHYTGMNEVGHKFSAPSSNVCELQNRGHGTSPGKAGTPKDKNTINKQMFCISEIQLAAKEDLDSSSRCSSSSSTGTSCTPRLVPGHRMWADKNGRHILGLIEDYNALRKQISEGQKLVSEMEAPLREMTGMKNLEPGVKVPDQESLHIFSANIHTVQQNLEEAARLLKLLWRVSLPLKVVHSTAHCSQDEGMKAEILRLHKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLALTHDVLKKARGNLEVQPAENQKAASHTNKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1827891..1827950,1830206..1830252,1834393..1834531,1836813..1836959,1839393..1839652,1839750..1839884,1841589..1841837,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1827891-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841837:-1:exon
so has part: feature:1839750-1839884:-1:exon
so has part: feature:1839393-1839652:-1:exon
so has part: feature:1836813-1836959:-1:exon
so has part: feature:1834393-1834531:-1:exon
so has part: feature:1830206-1830252:-1:exon
so has part: feature:1827891-1827950:-1:exon

XP_008169052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1841589-1841837:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1839750-1839884:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1839393-1839652:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1836813-1836959:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1834393-1834531:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1830206-1830252:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1827891-1827950:-1:exon

CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854173.1
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1841589..1841851,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931759))
location: region:1841589-1931759:-1
so has part: feature:1931374-1931759:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841589-1841851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1841589-1841851:-1:exon

position:1841851:-1
position: 1841851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2 isoform X8
translation: MDSLPGEDLTLPVEFSGSVSISRLPDVSRDEPRIGLGVSGALLDVAEDAVSPTRARTMKDYENQITDLKKENFNLKLRIYFLEEHMQQKFDGPTEDIYKINIELKVEVESLKRDLQEREKLLIKASKAVESLAQGGDAEIQRVKEEAHKKVQQVEEILTSRINLLEENLKAAQEEVEKAFAMTEREKVLRMAVEQKLSGVTNTHLKELDSITELPEKDRLIEQLTLSLKSKEAIIQHLEEEKSQSESCDGNLPAEKIRELTVALRHEKDSEIEAIKMELRNEKNCFEKKIQSLQEELRERENELSVEKKNGLKRDKTIQGLTLALKTKEKENEELNSEIEELNVSLAKAREATHKAQIQKFKGAEDYQALLMEKETLLAELRSENLTKDTENRKLQRRIKRTDQELNDLTLEREKMERELDEAQLQKSRGDKTINDLRNQLEKLHGEMIEREKAVEHHYNILLSESNQKLQSQELVIKRLTDSVNQKDLLLQKLDAAIKEKDVELQGLIKKCKNLLKAKEDLELKNEDLIKEKCASESQQSIIKIVKELEEKKESEYEELILVLRKEQHIYSTLVKTLKDSDSINSLQTELNNIFLLRKQLEEDILANRNLRKVLEDQIKDTKNREDETFSFCGDQTSYMSICLGEHDHLNLQIDHLSLEELKKKVAELILMVKDLHSINQELKKKQLGLSRSETQGKETLKILNQNEFLERTEETMTQAGDFDNKNAESCQRSERTSEACPQLPLDHHLDLDMQIAPSDYSDGSCKDRHYRNPNKPRFEHDIAGKHFGRIEMSEHEVEEMSLLTSLLNENGTSVLESSRQEQMKIVIALLDHLSTTEQECSSEDIENKDEKDLRQMIIQLRAELRHSKQVNKILKQQVELKSTFDGKERLYPDTAPQVNKDIELLKVELKDTATQTMTIEGNVMRLKHEGKRGETEEKTKYSRLNTELQQENAYEKGEQHERLSVTSRTNKSDFIYPFKKSRLPIPLKSSRSLGNIPLTSCTQKPDMHLQHRLMALDEGLKECKIQNKQLHKELSLSGSVIENLQEKPEQERVLVRAESLVRMDCKEIQVDSQAVGFDTYDKNENKMVMDQRTSQETETPHNISDMNILHSLKELNKEFYSMDNQDIDSATTYSGSKSLLSLKLSVASTDAFDDYEVIDDLEELRQRIKDMKSELEKYKMFIFHLQPTNPFLSSDIFNIVLNDAELPMERHVIQMQDTDGQETKTFSTVHQQVDYEIHIENLNSQSAETPDEQTSQNLKQLLLENEAELEREQIANMHLLDEVYRLQNKLRETSPSKYDSLVHSQARELSFQRQQIKEIHSICVTYHQHLTSLIKAFEELLQASDVDYCVAEGFREQLNQSVQLFEKLEKKFLYGESLDAEVAKLYELAQRDNEKTTTMYQQLKDESPIPSAFHSLSDFEMSEKSSIGSPEPKQDLVEEEHDKLALVPSKFPPELLMEHLQEIRSLRQRLEDSIKTNERLRLQLERQVTDMELNQGSANIFIHGSEQYNSLTSEIHFLRKQNQVLNVMLAKGSRDKQKENEKLRESLSKKNAIIEHLHQDYECFKKENEKLQKQIGKKEDENRHLTHEIYSSRNELNRLQTEMNVKQHQLSENDKLLQSLRVELKVYEKLDEARRRRTVLLLKTSWILDMKNSEKIKIIHLTYMNY
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(1841766..1841851,1844859..1844980,1845184..1845373,1847858..1847974,1853220..1853345,1854538..1854725,1856072..1856120,1858717..1858949,1861944..1862547,1866853..1866969,1869158..1869413,1872043..1872502,1875237..1875427,1876604..1876651,1877407..1877499,1883247..1883375,1884788..1884903,1886083..1886213,1891276..1891373,1900336..1900509,1901470..1901640,1907700..1907918,1910240..1910332,1910984..1911103,1911513..1911566,1913436..1913598,1915938..1916092,1918847..1918970,1920853..1920929,1922128..1922238,1927402..1927469,1930787..1930854,1931374..1931426))
location: region:1841766-1931426:-1
so has part: feature:1931374-1931426:-1:exon
so has part: feature:1930787-1930854:-1:exon
so has part: feature:1927402-1927469:-1:exon
so has part: feature:1922128-1922238:-1:exon
so has part: feature:1920853-1920929:-1:exon
so has part: feature:1918847-1918970:-1:exon
so has part: feature:1915938-1916092:-1:exon
so has part: feature:1913436-1913598:-1:exon
so has part: feature:1911513-1911566:-1:exon
so has part: feature:1910984-1911103:-1:exon
so has part: feature:1910240-1910332:-1:exon
so has part: feature:1907700-1907918:-1:exon
so has part: feature:1901470-1901640:-1:exon
so has part: feature:1900336-1900509:-1:exon
so has part: feature:1891276-1891373:-1:exon
so has part: feature:1886083-1886213:-1:exon
so has part: feature:1884788-1884903:-1:exon
so has part: feature:1883247-1883375:-1:exon
so has part: feature:1877407-1877499:-1:exon
so has part: feature:1876604-1876651:-1:exon
so has part: feature:1875237-1875427:-1:exon
so has part: feature:1872043-1872502:-1:exon
so has part: feature:1869158-1869413:-1:exon
so has part: feature:1866853-1866969:-1:exon
so has part: feature:1861944-1862547:-1:exon
so has part: feature:1858717-1858949:-1:exon
so has part: feature:1856072-1856120:-1:exon
so has part: feature:1854538-1854725:-1:exon
so has part: feature:1853220-1853345:-1:exon
so has part: feature:1847858-1847974:-1:exon
so has part: feature:1845184-1845373:-1:exon
so has part: feature:1844859-1844980:-1:exon
so has part: feature:1841766-1841851:-1:exon

XP_042710107.1
type: Protein
SIO_000068: ncbiprotein

position:1841766:-1
position: 1841766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931374-1931426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930787-1930854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1927402-1927469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922128-1922238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1920853-1920929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918847-1918970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915938-1916092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913436-1913598:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911513-1911566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910984-1911103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910240-1910332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1907700-1907918:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1901470-1901640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1900336-1900509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1891276-1891373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886083-1886213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1884788-1884903:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1883247-1883375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1877407-1877499:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1876604-1876651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1875237-1875427:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1872043-1872502:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1869158-1869413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1866853-1866969:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1861944-1862547:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1858717-1858949:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1856072-1856120:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854538-1854725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1853220-1853345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1847858-1847974:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1845184-1845373:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1844859-1844980:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1841766-1841851:-1:exon

MEGF9
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: MEGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1939252..2025496)
location: region:1939252-2025496:-1
so has part: feature:1939252-2025496:-1:exon
subclass of: SO_0000010

101953632
type: Gene
SIO_000068: ncbigene

position:1939252:-1
position: 1939252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025496:-1
position: 2025496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1939252-2025496:-1:exon

MEGF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: MEGF9
product: multiple EGF like domains 9, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854174.1
SIO_010081: MEGF9
subclass of: SO_0000673
so part of: MEGF9
location: complement(join(1939252..1945967,1953032..1953175,1957599..1957738,1978194..1978395,2025009..2025496))
location: region:1939252-2025496:-1
so has part: feature:2025009-2025496:-1:exon
so has part: feature:1978194-1978395:-1:exon
so has part: feature:1957599-1957738:-1:exon
so has part: feature:1953032-1953175:-1:exon
so has part: feature:1939252-1945967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2025009-2025496:-1:exon

position:2025009:-1
position: 2025009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1978194-1978395:-1:exon

position:1978194:-1
position: 1978194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978395:-1
position: 1978395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1957599-1957738:-1:exon

position:1957599:-1
position: 1957599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1957738:-1
position: 1957738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1953032-1953175:-1:exon

position:1953032:-1
position: 1953032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953175:-1
position: 1953175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1939252-1945967:-1:exon

position:1945967:-1
position: 1945967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEGF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: MEGF9
product: multiple EGF like domains 9, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008170843.3
SIO_010081: MEGF9
subclass of: SO_0000673
so part of: MEGF9
location: complement(join(1939252..1945967,1951274..1951546,1953032..1953175,1957599..1957738,1978194..1978395,2025009..2025496))
location: region:1939252-2025496:-1
so has part: feature:2025009-2025496:-1:exon
so has part: feature:1978194-1978395:-1:exon
so has part: feature:1957599-1957738:-1:exon
so has part: feature:1953032-1953175:-1:exon
so has part: feature:1951274-1951546:-1:exon
so has part: feature:1939252-1945967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2025009-2025496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1978194-1978395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1957599-1957738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1953032-1953175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951274-1951546:-1:exon

position:1951274:-1
position: 1951274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951546:-1
position: 1951546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1939252-1945967:-1:exon

MEGF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: MEGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple epidermal growth factor-like domains protein 9 isoform X2
translation: MRVPRSPARLALLWLVAALSAGSLPREPEPGSSPAPGGEPGAALPAPRPVPGAAEGNELSPEATAPQPTFAPTLPRPGSPQPSAAAGHPDGASPAPPGAEPSPGTAASPAAAGSPLPSQPAPRPDGTSAGLPAAVPSPPAEEEEDVAAGGSSSKDYLCNCSALGSASVNECNTSTGQCECHKGYTGLRCENCEEGYLLNQTSGLCLPCGCSSKGSVNSLCDNFGKCQCKVGVTGFKCDQCRDGYYWVNQTSCEPCQCNNYSNSCDVLTGACWNCQGNTEGSHCEKCKVGFFRSILPSHDCNRCPCSTVASTGSCQIKVIPGPEPRGFITAAPNTSRTTSFSTTVINSTLAPTTVQTIFPVNSSDNSTSALADVSWTQFNIIILTVIIIVVVLLMGFVGAVYMYREYQNRKLNAPFWTIELKEDNISFSSYHDSIPNADVSGLLEEDGNEVAPNGQLTLTTPMHNYKA
SIO_010081: MEGF9
subclass of: SO_0000673
so part of: MEGF9
location: complement(join(1945513..1945967,1953032..1953175,1957599..1957738,1978194..1978395,2025009..2025471))
location: region:1945513-2025471:-1
so has part: feature:2025009-2025471:-1:exon
so has part: feature:1978194-1978395:-1:exon
so has part: feature:1957599-1957738:-1:exon
so has part: feature:1953032-1953175:-1:exon
so has part: feature:1945513-1945967:-1:exon

XP_042710108.1
type: Protein
SIO_000068: ncbiprotein

position:1945513:-1
position: 1945513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025471:-1
position: 2025471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2025009-2025471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1978194-1978395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1957599-1957738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1953032-1953175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1945513-1945967:-1:exon

MEGF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: MEGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple epidermal growth factor-like domains protein 9 isoform X1
translation: MRVPRSPARLALLWLVAALSAGSLPREPEPGSSPAPGGEPGAALPAPRPVPGAAEGNELSPEATAPQPTFAPTLPRPGSPQPSAAAGHPDGASPAPPGAEPSPGTAASPAAAGSPLPSQPAPRPDGTSAGLPAAVPSPPAEEEEDVAAGGSSSKDYLCNCSALGSASVNECNTSTGQCECHKGYTGLRCENCEEGYLLNQTSGLCLPCGCSSKGSVNSLCDNFGKCQCKVGVTGFKCDQCRDGYYWVNQTSCEPCQCNNYSNSCDVLTGACWNCQGNTEGSHCEKCKVGFFRSILPSHDCNRCPCSTVASTGSCQIKPGQHAPTCDSCKAGYTGPNCDQCDNGYYNSDSICIRCKCNGNVDPEQSPKVCKPDTGECIGCLHNTAGFHCEECQEGYVRDPEGANCTKKEVIPGPEPRGFITAAPNTSRTTSFSTTVINSTLAPTTVQTIFPVNSSDNSTSALADVSWTQFNIIILTVIIIVVVLLMGFVGAVYMYREYQNRKLNAPFWTIELKEDNISFSSYHDSIPNADVSGLLEEDGNEVAPNGQLTLTTPMHNYKA
SIO_010081: MEGF9
subclass of: SO_0000673
so part of: MEGF9
location: complement(join(1945513..1945967,1951274..1951546,1953032..1953175,1957599..1957738,1978194..1978395,2025009..2025471))
location: region:1945513-2025471:-1
so has part: feature:2025009-2025471:-1:exon
so has part: feature:1978194-1978395:-1:exon
so has part: feature:1957599-1957738:-1:exon
so has part: feature:1953032-1953175:-1:exon
so has part: feature:1951274-1951546:-1:exon
so has part: feature:1945513-1945967:-1:exon

XP_008169065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2025009-2025471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1978194-1978395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1957599-1957738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1953032-1953175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951274-1951546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1945513-1945967:-1:exon

LOC112059919
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC112059919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2136653..2158909)
location: region:2136653-2158909:-1
so has part: feature:2136653-2158909:-1:exon
subclass of: SO_0000011

112059919
type: Gene
SIO_000068: ncbigene

position:2136653:-1
position: 2136653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2158909:-1
position: 2158909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2136653-2158909:-1:exon

LOC112059919
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8478
nc RNA class: lncRNA
gene: LOC112059919
product: uncharacterized LOC112059919
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006175378.1
SIO_010081: LOC112059919
subclass of: SO_0000673
so part of: LOC112059919
location: complement(join(2136653..2137630,2156033..2156189,2158531..2158909))
location: region:2136653-2158909:-1
so has part: feature:2158531-2158909:-1:exon
so has part: feature:2156033-2156189:-1:exon
so has part: feature:2136653-2137630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2158531-2158909:-1:exon

position:2158531:-1
position: 2158531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2156033-2156189:-1:exon

position:2156033:-1
position: 2156033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2156189:-1
position: 2156189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2136653-2137630:-1:exon

position:2137630:-1
position: 2137630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101953340
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC101953340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2157285..2387562
location: region:2157285-2387562:1
so has part: feature:2157285-2387562:1:exon
subclass of: SO_0000010

101953340
type: Gene
SIO_000068: ncbigene

position:2157285:1
position: 2157285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2387562:1
position: 2387562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157285-2387562:1:exon

LOC101953340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC101953340
product: collagen alpha-1(XXVII) chain B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024107470.2
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2157285..2157706,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381599..2381770,2381962..2382089,2385155..2385373,2386148..2387562)
location: region:2157285-2387562:1
so has part: feature:2157285-2157706:1:exon
so has part: feature:2172673-2172743:1:exon
so has part: feature:2179216-2180645:1:exon
so has part: feature:2193313-2193366:1:exon
so has part: feature:2207420-2207473:1:exon
so has part: feature:2213928-2213981:1:exon
so has part: feature:2216044-2216097:1:exon
so has part: feature:2224260-2224304:1:exon
so has part: feature:2225161-2225214:1:exon
so has part: feature:2229650-2229694:1:exon
so has part: feature:2232686-2232739:1:exon
so has part: feature:2233993-2234037:1:exon
so has part: feature:2253890-2253943:1:exon
so has part: feature:2260522-2260566:1:exon
so has part: feature:2268825-2268878:1:exon
so has part: feature:2269327-2269371:1:exon
so has part: feature:2276036-2276089:1:exon
so has part: feature:2277902-2277955:1:exon
so has part: feature:2278109-2278162:1:exon
so has part: feature:2280175-2280228:1:exon
so has part: feature:2280537-2280590:1:exon
so has part: feature:2282438-2282482:1:exon
so has part: feature:2284545-2284598:1:exon
so has part: feature:2285850-2285894:1:exon
so has part: feature:2297204-2297257:1:exon
so has part: feature:2300359-2300412:1:exon
so has part: feature:2301158-2301211:1:exon
so has part: feature:2304710-2304763:1:exon
so has part: feature:2316776-2316829:1:exon
so has part: feature:2318750-2318794:1:exon
so has part: feature:2318978-2319022:1:exon
so has part: feature:2319253-2319306:1:exon
so has part: feature:2320729-2320782:1:exon
so has part: feature:2323923-2323976:1:exon
so has part: feature:2326603-2326656:1:exon
so has part: feature:2328023-2328076:1:exon
so has part: feature:2331905-2332012:1:exon
so has part: feature:2348856-2348909:1:exon
so has part: feature:2349012-2349119:1:exon
so has part: feature:2353182-2353235:1:exon
so has part: feature:2353568-2353621:1:exon
so has part: feature:2362438-2362494:1:exon
so has part: feature:2362670-2362723:1:exon
so has part: feature:2365324-2365377:1:exon
so has part: feature:2368286-2368339:1:exon
so has part: feature:2369847-2369900:1:exon
so has part: feature:2369980-2370087:1:exon
so has part: feature:2370525-2370632:1:exon
so has part: feature:2371785-2371892:1:exon
so has part: feature:2375888-2375941:1:exon
so has part: feature:2376660-2376722:1:exon
so has part: feature:2377703-2377756:1:exon
so has part: feature:2378859-2378894:1:exon
so has part: feature:2379353-2379370:1:exon
so has part: feature:2379807-2379842:1:exon
so has part: feature:2380196-2380222:1:exon
so has part: feature:2380532-2380600:1:exon
so has part: feature:2381599-2381770:1:exon
so has part: feature:2381962-2382089:1:exon
so has part: feature:2385155-2385373:1:exon
so has part: feature:2386148-2387562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2157285-2157706:1:exon

position:2157706:1
position: 2157706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2172673-2172743:1:exon

position:2172673:1
position: 2172673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172743:1
position: 2172743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2179216-2180645:1:exon

position:2179216:1
position: 2179216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180645:1
position: 2180645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2193313-2193366:1:exon

position:2193313:1
position: 2193313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193366:1
position: 2193366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2207420-2207473:1:exon

position:2207420:1
position: 2207420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207473:1
position: 2207473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2213928-2213981:1:exon

position:2213928:1
position: 2213928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213981:1
position: 2213981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2216044-2216097:1:exon

position:2216044:1
position: 2216044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216097:1
position: 2216097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2224260-2224304:1:exon

position:2224260:1
position: 2224260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224304:1
position: 2224304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2225161-2225214:1:exon

position:2225161:1
position: 2225161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225214:1
position: 2225214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2229650-2229694:1:exon

position:2229650:1
position: 2229650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 11
SIO_000628: feature:2232686-2232739:1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:2233993-2234037:1:exon

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SIO_000300: 13
SIO_000628: feature:2253890-2253943:1:exon

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SIO_000300: 14
SIO_000628: feature:2260522-2260566:1:exon

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SIO_000300: 15
SIO_000628: feature:2268825-2268878:1:exon

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SIO_000300: 16
SIO_000628: feature:2269327-2269371:1:exon

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SIO_000300: 17
SIO_000628: feature:2276036-2276089:1:exon

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SIO_000300: 18
SIO_000628: feature:2277902-2277955:1:exon

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SIO_000300: 19
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SIO_000300: 20
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SIO_000628: feature:2280537-2280590:1:exon

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SIO_000300: 23
SIO_000628: feature:2284545-2284598:1:exon

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SIO_000300: 24
SIO_000628: feature:2285850-2285894:1:exon

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SIO_000300: 26
SIO_000628: feature:2300359-2300412:1:exon

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SIO_000300: 27
SIO_000628: feature:2301158-2301211:1:exon

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SIO_000300: 28
SIO_000628: feature:2304710-2304763:1:exon

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SIO_000300: 29
SIO_000628: feature:2316776-2316829:1:exon

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SIO_000300: 30
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SIO_000300: 31
SIO_000628: feature:2318978-2319022:1:exon

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SIO_000300: 32
SIO_000628: feature:2319253-2319306:1:exon

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SIO_000300: 33
SIO_000628: feature:2320729-2320782:1:exon

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SIO_000300: 34
SIO_000628: feature:2323923-2323976:1:exon

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SIO_000300: 35
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SIO_000300: 36
SIO_000628: feature:2328023-2328076:1:exon

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SIO_000300: 37
SIO_000628: feature:2331905-2332012:1:exon

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SIO_000300: 38
SIO_000628: feature:2348856-2348909:1:exon

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SIO_000300: 39
SIO_000628: feature:2349012-2349119:1:exon

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SIO_000300: 40
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SIO_000300: 41
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SIO_000300: 42
SIO_000628: feature:2362438-2362494:1:exon

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SIO_000300: 43
SIO_000628: feature:2362670-2362723:1:exon

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SIO_000300: 44
SIO_000628: feature:2365324-2365377:1:exon

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SIO_000300: 45
SIO_000628: feature:2368286-2368339:1:exon

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SIO_000300: 46
SIO_000628: feature:2369847-2369900:1:exon

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SIO_000300: 47
SIO_000628: feature:2369980-2370087:1:exon

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SIO_000300: 48
SIO_000628: feature:2370525-2370632:1:exon

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SIO_000300: 49
SIO_000628: feature:2371785-2371892:1:exon

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SIO_000300: 50
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SIO_000300: 51
SIO_000628: feature:2376660-2376722:1:exon

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SIO_000300: 52
SIO_000628: feature:2377703-2377756:1:exon

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SIO_000300: 53
SIO_000628: feature:2378859-2378894:1:exon

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SIO_000300: 54
SIO_000628: feature:2379353-2379370:1:exon

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SIO_000300: 55
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SIO_000300: 56
SIO_000628: feature:2380196-2380222:1:exon

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SIO_000300: 57
SIO_000628: feature:2380532-2380600:1:exon

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SIO_000300: 58
SIO_000628: feature:2381599-2381770:1:exon

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SIO_000300: 59
SIO_000628: feature:2381962-2382089:1:exon

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urn:…
SIO_000300: 60
SIO_000628: feature:2385155-2385373:1:exon

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urn:…
SIO_000300: 61
SIO_000628: feature:2386148-2387562:1:exon

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LOC101953340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC101953340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVII) chain B isoform X2
translation: MNLGAGRRDCTASHLTTKGSLFLWIVLYFTCFLGFAQGSSEDVDILQRLGLAGKKPLSAWSSSRSVPQGVIPFKSGVIFTQRARIEAPIGTVIPTAFGTDLALVLSLCSHRINNAFLFSVKSKKKKLQLGVQFIPGKVIVYVGHKRSVYFDYNVHDGHWHNMAIDIRGQMVTLFTSCGKQRVDADLHFKKDEALDPQGSFLLGKMNQHSIQFEGAICQFDIYPSAKAAHNYCKYLKKQCRQADTFRPNLPPLVPLLPRDPSASPTAPLQPKLLLQGLKNLTTVIPTSELIKVTTPLKTPVTASTTLVPYKLLSAGPTTKAAKVTIVRSTVPSSTDMQLPVHSHPRTTTAALRISQPSSNASSQKHSLPTVRNILPAGQNSTAISRKELEQETKKMINQKTSTKPSETPSTVKPMRKKIENTSRHVHPMKQNPENLTSGPISNMLLPLPTRKSVPSLVPLLYTKSTPKSVHHTFRTSVQAFNLTTPAAVDGFQVFDPIGPTLFPFLLGLPGSKGNQGHPGPPGLPGLPGPPGKRGPRGPPGPHGNPGRPGLPGPKGQKGDPGLSPGKARNGEKGDMGLPGLSGLPGPSGRKGYKGYPGPPGHPGDQGERGPDGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGPDGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVHGLIGDMGALGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGLPGVPGDIGFQGDKGSQGFPGIPGARGKPGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGPKGKPGARGLPGPRGQPGQEGDEGPIGPPGSPGPEGRPGRKGFPGNPGPDGSKGEPGHPGRTGKVGEQGLMGFIGPVGEPGIVGEKGDRGTIGAPGPPGVKGSMGHPGTPGGTGFSGAPGPPGPAGVRGPPGIRGAKGRRGARGPDGPVGEPGSRGVKGLQGEPGKPGPDGQQGKMGETGETGPRGFLGIQGPSGPQGGKGAPGDPGPQGPQGPAGPLGEMGHKGPPGSMGQPGLPGESGMKGDLGQLGVPGEQGLIGQRGEPGLVGDSGPFGPDGVKGDKGEQGPEGERGEKGAEGLKGNEGPPGYPGITGVRGPEGKPGKQGEKGKTGQKGSKGYQGQLGETGPPGKMGPKGTQGLKGSRGTLGPMGAPGRMGAQGEPGLMGYEGHAGPPGPIGPPGPKGEKGEQGDDGKIEGPPGPPGDRGPVGNRGDRGEPGDPGYPGQEGLDGDRGKAGQQGLPGDPGPPGQPGPKGSKGEEGQKGKQGAWGEAGSRGSPGPVGLPGPRGVVGRQGQEGSPGVDGVPGKDGTAGLQGEQGDDGEEGTTGISGKRGNPGIPGLPGAQGPPGFKGERGLPGQTGPTGKRGTQGGMGLPGSPGDPGPKGQPGDFGESGFPGIAGMFGPKGPPGNLGFKGIQGPRGPPGLMGKEGIIGPLGILGPTGSSGPKGDKGSRGETGLQGPRGPPGPRGLPGPPGPTRIPASFQQDGFGAAFQTMMDSNTALKSTEQSYQHSDLLMLDQEGEIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMNCEQKMGDACSLSSGTYWIDPNLGCSSDTIQVTCNFTKGGQTCLSPITASKLEFNIGRVQMNFLHLLSSEVVQHITIHCLNMSVWREGSTEKPSEKAVRFKAWNGQIFEAEGPFKPKVATDDCKIQDGHWHKTVLTFRTQDPNQLPIINIYNLPPSEPGKQYHLEVGPVCFL
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2157654..2157706,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381599..2381770,2381962..2382089,2385155..2385373,2386148..2386294)
location: region:2157654-2386294:1
so has part: feature:2157654-2157706:1:exon
so has part: feature:2172673-2172743:1:exon
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so has part: feature:2193313-2193366:1:exon
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so has part: feature:2224260-2224304:1:exon
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so has part: feature:2276036-2276089:1:exon
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so has part: feature:2280175-2280228:1:exon
so has part: feature:2280537-2280590:1:exon
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so has part: feature:2284545-2284598:1:exon
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so has part: feature:2331905-2332012:1:exon
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so has part: feature:2371785-2371892:1:exon
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XP_023963238.1
type: Protein
SIO_000068: ncbiprotein

position:2157654:1
position: 2157654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386294:1
position: 2386294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
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SIO_000628: feature:2385155-2385373:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2386148-2386294:1:exon

LOC101953340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC101953340
product: collagen alpha-1(XXVII) chain B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854175.1
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2159108..2159470,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381599..2381770,2381962..2382089,2385155..2385373,2386148..2387562)
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position:2159108:1
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type: ForwardStrandPosition
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urn:…
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position:2159470:1
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SIO_000628: feature:2385155-2385373:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2386148-2387562:1:exon

LOC101953340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC101953340
product: collagen alpha-1(XXVII) chain B, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024107472.2
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2159339..2159470,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381599..2381770,2381980..2382089,2385155..2385373,2386148..2387562)
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LOC101953340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC101953340
product: collagen alpha-1(XXVII) chain B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024107471.2
SIO_010081: LOC101953340
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LOC101953340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC101953340
product: collagen alpha-1(XXVII) chain B, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024107473.2
SIO_010081: LOC101953340
subclass of: SO_0000673
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so has part: feature:2362670-2362723:1:exon
so has part: feature:2365324-2365377:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:2172673-2172743:1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:2224260-2224304:1:exon

urn:…
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SIO_000628: feature:2225161-2225214:1:exon

urn:…
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SIO_000628: feature:2229650-2229694:1:exon

urn:…
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SIO_000628: feature:2232686-2232739:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2233993-2234037:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2253890-2253943:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2260522-2260566:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2268825-2268878:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2269327-2269371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2276036-2276089:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2277902-2277955:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2278109-2278162:1:exon

urn:…
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SIO_000628: feature:2280175-2280228:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2280537-2280590:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2282438-2282482:1:exon

urn:…
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SIO_000628: feature:2284545-2284598:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2285850-2285894:1:exon

urn:…
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SIO_000628: feature:2297204-2297257:1:exon

urn:…
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SIO_000628: feature:2300359-2300412:1:exon

urn:…
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SIO_000628: feature:2301158-2301211:1:exon

urn:…
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SIO_000628: feature:2304710-2304763:1:exon

urn:…
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SIO_000628: feature:2316776-2316829:1:exon

urn:…
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SIO_000628: feature:2318750-2318794:1:exon

urn:…
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SIO_000628: feature:2318978-2319022:1:exon

urn:…
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SIO_000628: feature:2319253-2319306:1:exon

urn:…
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SIO_000628: feature:2320729-2320782:1:exon

urn:…
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SIO_000628: feature:2323923-2323976:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2326603-2326656:1:exon

urn:…
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SIO_000628: feature:2328023-2328076:1:exon

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SIO_000628: feature:2331905-2332012:1:exon

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SIO_000628: feature:2348856-2348909:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2349012-2349119:1:exon

urn:…
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SIO_000628: feature:2353182-2353235:1:exon

urn:…
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SIO_000628: feature:2353568-2353621:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2362438-2362494:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2362670-2362723:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2365324-2365377:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2368286-2368339:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2369847-2369900:1:exon

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SIO_000300: 47
SIO_000628: feature:2369980-2370087:1:exon

urn:…
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SIO_000628: feature:2370525-2370632:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2371785-2371892:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2375888-2375941:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2376660-2376722:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2377703-2377756:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2378859-2378894:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2379353-2379370:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2379807-2379842:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2380196-2380222:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2380532-2380600:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2381602-2381770:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2381980-2382089:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2385155-2385373:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2386148-2387562:1:exon

LOC101953340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC101953340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVII) chain B isoform X1
translation: MEPESEPVSRLRATPAARGGSLFLWIVLYFTCFLGFAQGSSEDVDILQRLGLAGKKPLSAWSSSRSVPQGVIPFKSGVIFTQRARIEAPIGTVIPTAFGTDLALVLSLCSHRINNAFLFSVKSKKKKLQLGVQFIPGKVIVYVGHKRSVYFDYNVHDGHWHNMAIDIRGQMVTLFTSCGKQRVDADLHFKKDEALDPQGSFLLGKMNQHSIQFEGAICQFDIYPSAKAAHNYCKYLKKQCRQADTFRPNLPPLVPLLPRDPSASPTAPLQPKLLLQGLKNLTTVIPTSELIKVTTPLKTPVTASTTLVPYKLLSAGPTTKAAKVTIVRSTVPSSTDMQLPVHSHPRTTTAALRISQPSSNASSQKHSLPTVRNILPAGQNSTAISRKELEQETKKMINQKTSTKPSETPSTVKPMRKKIENTSRHVHPMKQNPENLTSGPISNMLLPLPTRKSVPSLVPLLYTKSTPKSVHHTFRTSVQAFNLTTPAAVDGFQVFDPIGPTLFPFLLGLPGSKGNQGHPGPPGLPGLPGPPGKRGPRGPPGPHGNPGRPGLPGPKGQKGDPGLSPGKARNGEKGDMGLPGLSGLPGPSGRKGYKGYPGPPGHPGDQGERGPDGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGPDGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVHGLIGDMGALGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGLPGVPGDIGFQGDKGSQGFPGIPGARGKPGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGPKGKPGARGLPGPRGQPGQEGDEGPIGPPGSPGPEGRPGRKGFPGNPGPDGSKGEPGHPGRTGKVGEQGLMGFIGPVGEPGIVGEKGDRGTIGAPGPPGVKGSMGHPGTPGGTGFSGAPGPPGPAGVRGPPGIRGAKGRRGARGPDGPVGEPGSRGVKGLQGEPGKPGPDGQQGKMGETGETGPRGFLGIQGPSGPQGGKGAPGDPGPQGPQGPAGPLGEMGHKGPPGSMGQPGLPGESGMKGDLGQLGVPGEQGLIGQRGEPGLVGDSGPFGPDGVKGDKGEQGPEGERGEKGAEGLKGNEGPPGYPGITGVRGPEGKPGKQGEKGKTGQKGSKGYQGQLGETGPPGKMGPKGTQGLKGSRGTLGPMGAPGRMGAQGEPGLMGYEGHAGPPGPIGPPGPKGEKGEQGDDGKIEGPPGPPGDRGPVGNRGDRGEPGDPGYPGQEGLDGDRGKAGQQGLPGDPGPPGQPGPKGSKGEEGQKGKQGAWGEAGSRGSPGPVGLPGPRGVVGRQGQEGSPGVDGVPGKDGTAGLQGEQGDDGEEGTTGISGKRGNPGIPGLPGAQGPPGFKGERGLPGQTGPTGKRGTQGGMGLPGSPGDPGPKGQPGDFGESGFPGIAGMFGPKGPPGNLGFKGIQGPRGPPGLMGKEGIIGPLGILGPTGSSGPKGDKGSRGETGLQGPRGPPGPRGLPGPPGPTRIPASFQQDGFGAAFQTMMDSNTALKSTEQSYQHSDLLMLDQEGEIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMNCEQKMGDACSLSSGTYWIDPNLGCSSDTIQVTCNFTKGGQTCLSPITASKLEFNIGRVQMNFLHLLSSEVVQHITIHCLNMSVWREGSTEKPSEKAVRFKAWNGQIFEAEGPFKPKVATDDCKIQDGHWHKTVLTFRTQDPNQLPIINIYNLPPSEPGKQYHLEVGPVCFL
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2159415..2159470,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381599..2381770,2381962..2382089,2385155..2385373,2386148..2386294)
location: region:2159415-2386294:1
so has part: feature:2159415-2159470:1:exon
so has part: feature:2172673-2172743:1:exon
so has part: feature:2179216-2180645:1:exon
so has part: feature:2193313-2193366:1:exon
so has part: feature:2207420-2207473:1:exon
so has part: feature:2213928-2213981:1:exon
so has part: feature:2216044-2216097:1:exon
so has part: feature:2224260-2224304:1:exon
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so has part: feature:2229650-2229694:1:exon
so has part: feature:2232686-2232739:1:exon
so has part: feature:2233993-2234037:1:exon
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so has part: feature:2260522-2260566:1:exon
so has part: feature:2268825-2268878:1:exon
so has part: feature:2269327-2269371:1:exon
so has part: feature:2276036-2276089:1:exon
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so has part: feature:2320729-2320782:1:exon
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so has part: feature:2353568-2353621:1:exon
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so has part: feature:2362670-2362723:1:exon
so has part: feature:2365324-2365377:1:exon
so has part: feature:2368286-2368339:1:exon
so has part: feature:2369847-2369900:1:exon
so has part: feature:2369980-2370087:1:exon
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so has part: feature:2371785-2371892:1:exon
so has part: feature:2375888-2375941:1:exon
so has part: feature:2376660-2376722:1:exon
so has part: feature:2377703-2377756:1:exon
so has part: feature:2378859-2378894:1:exon
so has part: feature:2379353-2379370:1:exon
so has part: feature:2379807-2379842:1:exon
so has part: feature:2380196-2380222:1:exon
so has part: feature:2380532-2380600:1:exon
so has part: feature:2381599-2381770:1:exon
so has part: feature:2381962-2382089:1:exon
so has part: feature:2385155-2385373:1:exon
so has part: feature:2386148-2386294:1:exon

XP_042710109.1
type: Protein
SIO_000068: ncbiprotein

position:2159415:1
position: 2159415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2159415-2159470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172673-2172743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179216-2180645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193313-2193366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2207420-2207473:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2213928-2213981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2216044-2216097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224260-2224304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2225161-2225214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2229650-2229694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2232686-2232739:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2233993-2234037:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2253890-2253943:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2260522-2260566:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2268825-2268878:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2269327-2269371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2276036-2276089:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2277902-2277955:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2278109-2278162:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2280175-2280228:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2280537-2280590:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2282438-2282482:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2284545-2284598:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2285850-2285894:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2297204-2297257:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2300359-2300412:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2301158-2301211:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2304710-2304763:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2316776-2316829:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2318750-2318794:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2318978-2319022:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2319253-2319306:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2320729-2320782:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2323923-2323976:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2326603-2326656:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2328023-2328076:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2331905-2332012:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2348856-2348909:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2349012-2349119:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2353182-2353235:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2353568-2353621:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2362438-2362494:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2362670-2362723:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2365324-2365377:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2368286-2368339:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2369847-2369900:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2369980-2370087:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2370525-2370632:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2371785-2371892:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2375888-2375941:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2376660-2376722:1:exon

urn:…
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SIO_000628: feature:2377703-2377756:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2378859-2378894:1:exon

urn:…
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SIO_000628: feature:2379353-2379370:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2379807-2379842:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2380196-2380222:1:exon

urn:…
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SIO_000628: feature:2380532-2380600:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2381599-2381770:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2381962-2382089:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2385155-2385373:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2386148-2386294:1:exon

LOC101953340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC101953340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVII) chain B isoform X4
translation: MEPESEPVSRLRATPAARGGSLFLWIVLYFTCFLGFAQGSSEDVDILQRLGLAGKKPLSAWSSSRSVPQGVIPFKSGVIFTQRARIEAPIGTVIPTAFGTDLALVLSLCSHRINNAFLFSVKSKKKKLQLGVQFIPGKVIVYVGHKRSVYFDYNVHDGHWHNMAIDIRGQMVTLFTSCGKQRVDADLHFKKDEALDPQGSFLLGKMNQHSIQFEGAICQFDIYPSAKAAHNYCKYLKKQCRQADTFRPNLPPLVPLLPRDPSASPTAPLQPKLLLQGLKNLTTVIPTSELIKVTTPLKTPVTASTTLVPYKLLSAGPTTKAAKVTIVRSTVPSSTDMQLPVHSHPRTTTAALRISQPSSNASSQKHSLPTVRNILPAGQNSTAISRKELEQETKKMINQKTSTKPSETPSTVKPMRKKIENTSRHVHPMKQNPENLTSGPISNMLLPLPTRKSVPSLVPLLYTKSTPKSVHHTFRTSVQAFNLTTPAAVDGFQVFDPIGPTLFPFLLGLPGSKGNQGHPGPPGLPGLPGPPGKRGPRGPPGPHGNPGRPGLPGPKGQKGDPGLSPGKARNGEKGDMGLPGLSGLPGPSGRKGYKGYPGPPGHPGDQGERGPDGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGPDGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVHGLIGDMGALGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGLPGVPGDIGFQGDKGSQGFPGIPGARGKPGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGPKGKPGARGLPGPRGQPGQEGDEGPIGPPGSPGPEGRPGRKGFPGNPGPDGSKGEPGHPGRTGKVGEQGLMGFIGPVGEPGIVGEKGDRGTIGAPGPPGVKGSMGHPGTPGGTGFSGAPGPPGPAGVRGPPGIRGAKGRRGARGPDGPVGEPGSRGVKGLQGEPGKPGPDGQQGKMGETGETGPRGFLGIQGPSGPQGGKGAPGDPGPQGPQGPAGPLGEMGHKGPPGSMGQPGLPGESGMKGDLGQLGVPGEQGLIGQRGEPGLVGDSGPFGPDGVKGDKGEQGPEGERGEKGAEGLKGNEGPPGYPGITGVRGPEGKPGKQGEKGKTGQKGSKGYQGQLGETGPPGKMGPKGTQGLKGSRGTLGPMGAPGRMGAQGEPGLMGYEGHAGPPGPIGPPGPKGEKGEQGDDGKIEGPPGPPGDRGPVGNRGDRGEPGDPGYPGQEGLDGDRGKAGQQGLPGDPGPPGQPGPKGSKGEEGQKGKQGAWGEAGSRGSPGPVGLPGPRGVVGRQGQEGSPGVDGVPGKDGTAGLQGEQGDDGEEGTTGISGKRGNPGIPGLPGAQGPPGFKGERGLPGQTGPTGKRGTQGGMGLPGSPGDPGPKGQPGDFGESGFPGIAGMFGPKGPPGNLGFKGIQGPRGPPGLMGKEGIIGPLGILGPTGSSGPKGDKGSRGETGLQGPRGPPGPRGLPGPPGPTRIPASFQQDGFGAAFQTMMDSNTALKSTEQSYQHSDLLMLDQEGEIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMNCEQKMGDGTYWIDPNLGCSSDTIQVTCNFTKGGQTCLSPITASKLEFNIGRVQMNFLHLLSSEVVQHITIHCLNMSVWREGSTEKPSEKAVRFKAWNGQIFEAEGPFKPKVATDDCKIQDGHWHKTVLTFRTQDPNQLPIINIYNLPPSEPGKQYHLEVGPVCFL
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2159415..2159470,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381599..2381770,2381980..2382089,2385155..2385373,2386148..2386294)
location: region:2159415-2386294:1
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XP_023963240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2159415-2159470:1:exon

urn:…
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SIO_000628: feature:2278109-2278162:1:exon

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SIO_000628: feature:2282438-2282482:1:exon

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SIO_000628: feature:2316776-2316829:1:exon

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SIO_000628: feature:2319253-2319306:1:exon

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SIO_000628: feature:2320729-2320782:1:exon

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SIO_000628: feature:2323923-2323976:1:exon

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SIO_000628: feature:2326603-2326656:1:exon

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SIO_000628: feature:2328023-2328076:1:exon

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SIO_000628: feature:2331905-2332012:1:exon

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urn:…
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SIO_000628: feature:2386148-2386294:1:exon

LOC101953340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC101953340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVII) chain B isoform X3
translation: MEPESEPVSRLRATPAARGGSLFLWIVLYFTCFLGFAQGSSEDVDILQRLGLAGKKPLSAWSSSRSVPQGVIPFKSGVIFTQRARIEAPIGTVIPTAFGTDLALVLSLCSHRINNAFLFSVKSKKKKLQLGVQFIPGKVIVYVGHKRSVYFDYNVHDGHWHNMAIDIRGQMVTLFTSCGKQRVDADLHFKKDEALDPQGSFLLGKMNQHSIQFEGAICQFDIYPSAKAAHNYCKYLKKQCRQADTFRPNLPPLVPLLPRDPSASPTAPLQPKLLLQGLKNLTTVIPTSELIKVTTPLKTPVTASTTLVPYKLLSAGPTTKAAKVTIVRSTVPSSTDMQLPVHSHPRTTTAALRISQPSSNASSQKHSLPTVRNILPAGQNSTAISRKELEQETKKMINQKTSTKPSETPSTVKPMRKKIENTSRHVHPMKQNPENLTSGPISNMLLPLPTRKSVPSLVPLLYTKSTPKSVHHTFRTSVQAFNLTTPAAVDGFQVFDPIGPTLFPFLLGLPGSKGNQGHPGPPGLPGLPGPPGKRGPRGPPGPHGNPGRPGLPGPKGQKGDPGLSPGKARNGEKGDMGLPGLSGLPGPSGRKGYKGYPGPPGHPGDQGERGPDGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGPDGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVHGLIGDMGALGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGLPGVPGDIGFQGDKGSQGFPGIPGARGKPGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGPKGKPGARGLPGPRGQPGQEGDEGPIGPPGSPGPEGRPGRKGFPGNPGPDGSKGEPGHPGRTGKVGEQGLMGFIGPVGEPGIVGEKGDRGTIGAPGPPGVKGSMGHPGTPGGTGFSGAPGPPGPAGVRGPPGIRGAKGRRGARGPDGPVGEPGSRGVKGLQGEPGKPGPDGQQGKMGETGETGPRGFLGIQGPSGPQGGKGAPGDPGPQGPQGPAGPLGEMGHKGPPGSMGQPGLPGESGMKGDLGQLGVPGEQGLIGQRGEPGLVGDSGPFGPDGVKGDKGEQGPEGERGEKGAEGLKGNEGPPGYPGITGVRGPEGKPGKQGEKGKTGQKGSKGYQGQLGETGPPGKMGPKGTQGLKGSRGTLGPMGAPGRMGAQGEPGLMGYEGHAGPPGPIGPPGPKGEKGEQGDDGKIEGPPGPPGDRGPVGNRGDRGEPGDPGYPGQEGLDGDRGKAGQQGLPGDPGPPGQPGPKGSKGEEGQKGKQGAWGEAGSRGSPGPVGLPGPRGVVGRQGQEGSPGVDGVPGKDGTAGLQGEQGDDGEEGTTGISGKRGNPGIPGLPGAQGPPGFKGERGLPGQTGPTGKRGTQGGMGLPGSPGDPGPKGQPGDFGESGFPGIAGMFGPKGPPGNLGFKGIQGPRGPPGLMGKEGIIGPLGILGPTGSSGPKGDKGSRGETGLQGPRGPPGPRGLPGPPGPTRIPASFQQDGFGAAFQTMMDSNTALKSTESYQHSDLLMLDQEGEIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMNCEQKMGDACSLSSGTYWIDPNLGCSSDTIQVTCNFTKGGQTCLSPITASKLEFNIGRVQMNFLHLLSSEVVQHITIHCLNMSVWREGSTEKPSEKAVRFKAWNGQIFEAEGPFKPKVATDDCKIQDGHWHKTVLTFRTQDPNQLPIINIYNLPPSEPGKQYHLEVGPVCFL
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2159415..2159470,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381602..2381770,2381962..2382089,2385155..2385373,2386148..2386294)
location: region:2159415-2386294:1
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so has part: feature:2385155-2385373:1:exon
so has part: feature:2386148-2386294:1:exon

XP_023963239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2159415-2159470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172673-2172743:1:exon

urn:…
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SIO_000628: feature:2179216-2180645:1:exon

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SIO_000628: feature:2193313-2193366:1:exon

urn:…
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SIO_000628: feature:2207420-2207473:1:exon

urn:…
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SIO_000628: feature:2213928-2213981:1:exon

urn:…
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SIO_000628: feature:2216044-2216097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224260-2224304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2225161-2225214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2229650-2229694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2232686-2232739:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2233993-2234037:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2253890-2253943:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2260522-2260566:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2268825-2268878:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2269327-2269371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2276036-2276089:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2277902-2277955:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2278109-2278162:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2280175-2280228:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2280537-2280590:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2282438-2282482:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2284545-2284598:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2285850-2285894:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2297204-2297257:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2300359-2300412:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2301158-2301211:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2304710-2304763:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2316776-2316829:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2318750-2318794:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2318978-2319022:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2319253-2319306:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2320729-2320782:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2323923-2323976:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2326603-2326656:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2328023-2328076:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2331905-2332012:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2348856-2348909:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2349012-2349119:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2353182-2353235:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2353568-2353621:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2362438-2362494:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2362670-2362723:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2365324-2365377:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2368286-2368339:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2369847-2369900:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2369980-2370087:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2370525-2370632:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2371785-2371892:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2375888-2375941:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2376660-2376722:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2377703-2377756:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2378859-2378894:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2379353-2379370:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2379807-2379842:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2380196-2380222:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2380532-2380600:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2381602-2381770:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2381962-2382089:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2385155-2385373:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2386148-2386294:1:exon

LOC101953340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC101953340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVII) chain B isoform X5
translation: MEPESEPVSRLRATPAARGGSLFLWIVLYFTCFLGFAQGSSEDVDILQRLGLAGKKPLSAWSSSRSVPQGVIPFKSGVIFTQRARIEAPIGTVIPTAFGTDLALVLSLCSHRINNAFLFSVKSKKKKLQLGVQFIPGKVIVYVGHKRSVYFDYNVHDGHWHNMAIDIRGQMVTLFTSCGKQRVDADLHFKKDEALDPQGSFLLGKMNQHSIQFEGAICQFDIYPSAKAAHNYCKYLKKQCRQADTFRPNLPPLVPLLPRDPSASPTAPLQPKLLLQGLKNLTTVIPTSELIKVTTPLKTPVTASTTLVPYKLLSAGPTTKAAKVTIVRSTVPSSTDMQLPVHSHPRTTTAALRISQPSSNASSQKHSLPTVRNILPAGQNSTAISRKELEQETKKMINQKTSTKPSETPSTVKPMRKKIENTSRHVHPMKQNPENLTSGPISNMLLPLPTRKSVPSLVPLLYTKSTPKSVHHTFRTSVQAFNLTTPAAVDGFQVFDPIGPTLFPFLLGLPGSKGNQGHPGPPGLPGLPGPPGKRGPRGPPGPHGNPGRPGLPGPKGQKGDPGLSPGKARNGEKGDMGLPGLSGLPGPSGRKGYKGYPGPPGHPGDQGERGPDGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGPDGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVHGLIGDMGALGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGLPGVPGDIGFQGDKGSQGFPGIPGARGKPGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGPKGKPGARGLPGPRGQPGQEGDEGPIGPPGSPGPEGRPGRKGFPGNPGPDGSKGEPGHPGRTGKVGEQGLMGFIGPVGEPGIVGEKGDRGTIGAPGPPGVKGSMGHPGTPGGTGFSGAPGPPGPAGVRGPPGIRGAKGRRGARGPDGPVGEPGSRGVKGLQGEPGKPGPDGQQGKMGETGETGPRGFLGIQGPSGPQGGKGAPGDPGPQGPQGPAGPLGEMGHKGPPGSMGQPGLPGESGMKGDLGQLGVPGEQGLIGQRGEPGLVGDSGPFGPDGVKGDKGEQGPEGERGEKGAEGLKGNEGPPGYPGITGVRGPEGKPGKQGEKGKTGQKGSKGYQGQLGETGPPGKMGPKGTQGLKGSRGTLGPMGAPGRMGAQGEPGLMGYEGHAGPPGPIGPPGPKGEKGEQGDDGKIEGPPGPPGDRGPVGNRGDRGEPGDPGYPGQEGLDGDRGKAGQQGLPGDPGPPGQPGPKGSKGEEGQKGKQGAWGEAGSRGSPGPVGLPGPRGVVGRQGQEGSPGVDGVPGKDGTAGLQGEQGDDGEEGTTGISGKRGNPGIPGLPGAQGPPGFKGERGLPGQTGPTGKRGTQGGMGLPGSPGDPGPKGQPGDFGESGFPGIAGMFGPKGPPGNLGFKGIQGPRGPPGLMGKEGIIGPLGILGPTGSSGPKGDKGSRGETGLQGPRGPPGPRGLPGPPGPTRIPASFQQDGFGAAFQTMMDSNTALKSTESYQHSDLLMLDQEGEIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMNCEQKMGDGTYWIDPNLGCSSDTIQVTCNFTKGGQTCLSPITASKLEFNIGRVQMNFLHLLSSEVVQHITIHCLNMSVWREGSTEKPSEKAVRFKAWNGQIFEAEGPFKPKVATDDCKIQDGHWHKTVLTFRTQDPNQLPIINIYNLPPSEPGKQYHLEVGPVCFL
SIO_010081: LOC101953340
subclass of: SO_0000673
so part of: LOC101953340
location: join(2159415..2159470,2172673..2172743,2179216..2180645,2193313..2193366,2207420..2207473,2213928..2213981,2216044..2216097,2224260..2224304,2225161..2225214,2229650..2229694,2232686..2232739,2233993..2234037,2253890..2253943,2260522..2260566,2268825..2268878,2269327..2269371,2276036..2276089,2277902..2277955,2278109..2278162,2280175..2280228,2280537..2280590,2282438..2282482,2284545..2284598,2285850..2285894,2297204..2297257,2300359..2300412,2301158..2301211,2304710..2304763,2316776..2316829,2318750..2318794,2318978..2319022,2319253..2319306,2320729..2320782,2323923..2323976,2326603..2326656,2328023..2328076,2331905..2332012,2348856..2348909,2349012..2349119,2353182..2353235,2353568..2353621,2362438..2362494,2362670..2362723,2365324..2365377,2368286..2368339,2369847..2369900,2369980..2370087,2370525..2370632,2371785..2371892,2375888..2375941,2376660..2376722,2377703..2377756,2378859..2378894,2379353..2379370,2379807..2379842,2380196..2380222,2380532..2380600,2381602..2381770,2381980..2382089,2385155..2385373,2386148..2386294)
location: region:2159415-2386294:1
so has part: feature:2159415-2159470:1:exon
so has part: feature:2172673-2172743:1:exon
so has part: feature:2179216-2180645:1:exon
so has part: feature:2193313-2193366:1:exon
so has part: feature:2207420-2207473:1:exon
so has part: feature:2213928-2213981:1:exon
so has part: feature:2216044-2216097:1:exon
so has part: feature:2224260-2224304:1:exon
so has part: feature:2225161-2225214:1:exon
so has part: feature:2229650-2229694:1:exon
so has part: feature:2232686-2232739:1:exon
so has part: feature:2233993-2234037:1:exon
so has part: feature:2253890-2253943:1:exon
so has part: feature:2260522-2260566:1:exon
so has part: feature:2268825-2268878:1:exon
so has part: feature:2269327-2269371:1:exon
so has part: feature:2276036-2276089:1:exon
so has part: feature:2277902-2277955:1:exon
so has part: feature:2278109-2278162:1:exon
so has part: feature:2280175-2280228:1:exon
so has part: feature:2280537-2280590:1:exon
so has part: feature:2282438-2282482:1:exon
so has part: feature:2284545-2284598:1:exon
so has part: feature:2285850-2285894:1:exon
so has part: feature:2297204-2297257:1:exon
so has part: feature:2300359-2300412:1:exon
so has part: feature:2301158-2301211:1:exon
so has part: feature:2304710-2304763:1:exon
so has part: feature:2316776-2316829:1:exon
so has part: feature:2318750-2318794:1:exon
so has part: feature:2318978-2319022:1:exon
so has part: feature:2319253-2319306:1:exon
so has part: feature:2320729-2320782:1:exon
so has part: feature:2323923-2323976:1:exon
so has part: feature:2326603-2326656:1:exon
so has part: feature:2328023-2328076:1:exon
so has part: feature:2331905-2332012:1:exon
so has part: feature:2348856-2348909:1:exon
so has part: feature:2349012-2349119:1:exon
so has part: feature:2353182-2353235:1:exon
so has part: feature:2353568-2353621:1:exon
so has part: feature:2362438-2362494:1:exon
so has part: feature:2362670-2362723:1:exon
so has part: feature:2365324-2365377:1:exon
so has part: feature:2368286-2368339:1:exon
so has part: feature:2369847-2369900:1:exon
so has part: feature:2369980-2370087:1:exon
so has part: feature:2370525-2370632:1:exon
so has part: feature:2371785-2371892:1:exon
so has part: feature:2375888-2375941:1:exon
so has part: feature:2376660-2376722:1:exon
so has part: feature:2377703-2377756:1:exon
so has part: feature:2378859-2378894:1:exon
so has part: feature:2379353-2379370:1:exon
so has part: feature:2379807-2379842:1:exon
so has part: feature:2380196-2380222:1:exon
so has part: feature:2380532-2380600:1:exon
so has part: feature:2381602-2381770:1:exon
so has part: feature:2381980-2382089:1:exon
so has part: feature:2385155-2385373:1:exon
so has part: feature:2386148-2386294:1:exon

XP_023963241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2159415-2159470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172673-2172743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179216-2180645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193313-2193366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2207420-2207473:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2213928-2213981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2216044-2216097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224260-2224304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2225161-2225214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2229650-2229694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2232686-2232739:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2233993-2234037:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2253890-2253943:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2260522-2260566:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2268825-2268878:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2269327-2269371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2276036-2276089:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2277902-2277955:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2278109-2278162:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2280175-2280228:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2280537-2280590:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2282438-2282482:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2284545-2284598:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2285850-2285894:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2297204-2297257:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2300359-2300412:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2301158-2301211:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2304710-2304763:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2316776-2316829:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2318750-2318794:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2318978-2319022:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2319253-2319306:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2320729-2320782:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2323923-2323976:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2326603-2326656:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2328023-2328076:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2331905-2332012:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2348856-2348909:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2349012-2349119:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2353182-2353235:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2353568-2353621:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2362438-2362494:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2362670-2362723:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2365324-2365377:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2368286-2368339:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2369847-2369900:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2369980-2370087:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2370525-2370632:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2371785-2371892:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2375888-2375941:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2376660-2376722:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2377703-2377756:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2378859-2378894:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2379353-2379370:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2379807-2379842:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2380196-2380222:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2380532-2380600:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2381602-2381770:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2381980-2382089:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2385155-2385373:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2386148-2386294:1:exon

LOC101943565
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC101943565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2389929..2398765
location: region:2389929-2398765:1
so has part: feature:2389929-2398765:1:exon
subclass of: SO_0000010

101943565
type: Gene
SIO_000068: ncbigene

position:2389929:1
position: 2389929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398765:1
position: 2398765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2389929-2398765:1:exon

LOC101943565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC101943565
product: alpha-1-acid glycoprotein-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293471.4
SIO_010081: LOC101943565
subclass of: SO_0000673
so part of: LOC101943565
location: join(2389929..2392089,2394124..2394266,2395414..2395487,2396070..2396171,2396954..2397054,2398367..2398765)
location: region:2389929-2398765:1
so has part: feature:2389929-2392089:1:exon
so has part: feature:2394124-2394266:1:exon
so has part: feature:2395414-2395487:1:exon
so has part: feature:2396070-2396171:1:exon
so has part: feature:2396954-2397054:1:exon
so has part: feature:2398367-2398765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2389929-2392089:1:exon

position:2392089:1
position: 2392089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2394124-2394266:1:exon

position:2394124:1
position: 2394124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394266:1
position: 2394266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2395414-2395487:1:exon

position:2395414:1
position: 2395414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2395487:1
position: 2395487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2396070-2396171:1:exon

position:2396070:1
position: 2396070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396171:1
position: 2396171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2396954-2397054:1:exon

position:2396954:1
position: 2396954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2397054:1
position: 2397054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2398367-2398765:1:exon

position:2398367:1
position: 2398367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101943565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC101943565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1-acid glycoprotein-like
translation: MALACIAIILGSAHLLTAKPLDCEPLAPETMDNATMTKLLGKWFYIGGASQHPPTLQELELIKNAYFFLYPGSLQDELLVTEVMKLKDKCVVDNSSYISVIRDNFTMIRHGPNESSVAQLIKSSSGDTMTLYHIDGTYKGLSISARTQNLTTEQLEEFETQVACLGLKEEEIVYTSMKDFCPMEEETDDKKHSVEVVEPSLG
SIO_010081: LOC101943565
subclass of: SO_0000673
so part of: LOC101943565
location: join(2391976..2392089,2394124..2394266,2395414..2395487,2396070..2396171,2396954..2397054,2398367..2398441)
location: region:2391976-2398441:1
so has part: feature:2391976-2392089:1:exon
so has part: feature:2394124-2394266:1:exon
so has part: feature:2395414-2395487:1:exon
so has part: feature:2396070-2396171:1:exon
so has part: feature:2396954-2397054:1:exon
so has part: feature:2398367-2398441:1:exon

XP_005293528.1
type: Protein
SIO_000068: ncbiprotein

position:2391976:1
position: 2391976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398441:1
position: 2398441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2391976-2392089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2394124-2394266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395414-2395487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2396070-2396171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2396954-2397054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2398367-2398441:1:exon

LOC122174093
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC122174093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2402004..2413548
location: region:2402004-2413548:1
so has part: feature:2402004-2413548:1:exon
subclass of: SO_0000010

122174093
type: Gene
SIO_000068: ncbigene

position:2402004:1
position: 2402004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413548:1
position: 2413548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2402004-2413548:1:exon

LOC122174093
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: LOC122174093
product: alpha-1-acid glycoprotein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042854475.1
SIO_010081: LOC122174093
subclass of: SO_0000673
so part of: LOC122174093
location: join(2402004..2402238,2403161..2403303,2404720..2404793,2405502..2405612,2409837..2409940,2413480..2413548)
location: region:2402004-2413548:1
so has part: feature:2402004-2402238:1:exon
so has part: feature:2403161-2403303:1:exon
so has part: feature:2404720-2404793:1:exon
so has part: feature:2405502-2405612:1:exon
so has part: feature:2409837-2409940:1:exon
so has part: feature:2413480-2413548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2402004-2402238:1:exon

position:2402238:1
position: 2402238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2403161-2403303:1:exon

position:2403161:1
position: 2403161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403303:1
position: 2403303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2404720-2404793:1:exon

position:2404720:1
position: 2404720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404793:1
position: 2404793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2405502-2405612:1:exon

position:2405502:1
position: 2405502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405612:1
position: 2405612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2409837-2409940:1:exon

position:2409837:1
position: 2409837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2409940:1
position: 2409940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2413480-2413548:1:exon

position:2413480:1
position: 2413480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122174093
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: LOC122174093
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2413495..2413497,aa:OTHER)
product: LOW QUALITY PROTEIN: alpha-1-acid glycoprotein 1-like
translation: MALACFVTFLSLAHLLSSMPLQCELLLPQIPDNTTASKLLGKWFYIAGASQFPFHLLEMVLIDNGYLDVNPTEQEQELFINQHVTVGDKCLSNNSTYLEVSINNATLIKYAKNQRTMGKLMKSSSEEIFLIQYQMHKEKNYAGLYLYARNQNMSNTQLEEFRDHAKCLGLREEEIIYAPWQKELCPMXETKQTIPQARGPQLQY
SIO_010081: LOC122174093
subclass of: SO_0000673
so part of: LOC122174093
location: join(2402125..2402238,2403161..2403303,2404720..2404793,2405502..2405612,2409837..2409940,2413480..2413548)
location: region:2402125-2413548:1
so has part: feature:2402125-2402238:1:exon
so has part: feature:2403161-2403303:1:exon
so has part: feature:2404720-2404793:1:exon
so has part: feature:2405502-2405612:1:exon
so has part: feature:2409837-2409940:1:exon
so has part: feature:2413480-2413548:1:exon

XP_042710409.1
type: Protein
SIO_000068: ncbiprotein

position:2402125:1
position: 2402125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2402125-2402238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403161-2403303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2404720-2404793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405502-2405612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2409837-2409940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2413480-2413548:1:exon

SLC25A25
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2415759..2452390)
location: region:2415759-2452390:-1
so has part: feature:2415759-2452390:-1:exon
subclass of: SO_0000010

101942737
type: Gene
SIO_000068: ncbigene

position:2415759:-1
position: 2415759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452390:-1
position: 2452390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2415759-2452390:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293467.4
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2415759..2418277,2418760..2418910,2419348..2419515,2419823..2419930,2420411..2420563,2421390..2421548,2423456..2423567,2424720..2424807,2424913..2425039,2452065..2452390))
location: region:2415759-2452390:-1
so has part: feature:2452065-2452390:-1:exon
so has part: feature:2424913-2425039:-1:exon
so has part: feature:2424720-2424807:-1:exon
so has part: feature:2423456-2423567:-1:exon
so has part: feature:2421390-2421548:-1:exon
so has part: feature:2420411-2420563:-1:exon
so has part: feature:2419823-2419930:-1:exon
so has part: feature:2419348-2419515:-1:exon
so has part: feature:2418760-2418910:-1:exon
so has part: feature:2415759-2418277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2452065-2452390:-1:exon

position:2452065:-1
position: 2452065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2424913-2425039:-1:exon

position:2424913:-1
position: 2424913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2425039:-1
position: 2425039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2424720-2424807:-1:exon

position:2424720:-1
position: 2424720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2424807:-1
position: 2424807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2423456-2423567:-1:exon

position:2423456:-1
position: 2423456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2423567:-1
position: 2423567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2421390-2421548:-1:exon

position:2421390:-1
position: 2421390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2421548:-1
position: 2421548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2420411-2420563:-1:exon

position:2420411:-1
position: 2420411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420563:-1
position: 2420563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2419823-2419930:-1:exon

position:2419823:-1
position: 2419823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2419930:-1
position: 2419930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2419348-2419515:-1:exon

position:2419348:-1
position: 2419348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2419515:-1
position: 2419515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2418760-2418910:-1:exon

position:2418760:-1
position: 2418760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2418910:-1
position: 2418910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2415759-2418277:-1:exon

position:2418277:-1
position: 2418277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293468.4
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2415759..2418277,2418760..2418910,2419348..2419515,2419823..2419930,2420411..2420563,2421390..2421548,2423456..2423567,2424720..2424807,2424913..2425039,2436166..2436405))
location: region:2415759-2436405:-1
so has part: feature:2436166-2436405:-1:exon
so has part: feature:2424913-2425039:-1:exon
so has part: feature:2424720-2424807:-1:exon
so has part: feature:2423456-2423567:-1:exon
so has part: feature:2421390-2421548:-1:exon
so has part: feature:2420411-2420563:-1:exon
so has part: feature:2419823-2419930:-1:exon
so has part: feature:2419348-2419515:-1:exon
so has part: feature:2418760-2418910:-1:exon
so has part: feature:2415759-2418277:-1:exon

position:2436405:-1
position: 2436405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2436166-2436405:-1:exon

position:2436166:-1
position: 2436166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2424913-2425039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2424720-2424807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423456-2423567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2421390-2421548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2420411-2420563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2419823-2419930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2419348-2419515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418760-2418910:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2415759-2418277:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293470.3
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2415759..2418277,2418760..2418910,2419348..2419515,2419823..2419930,2420411..2420563,2421390..2421548,2423456..2423567,2424720..2424807,2424913..2425039,2428655..2429009))
location: region:2415759-2429009:-1
so has part: feature:2428655-2429009:-1:exon
so has part: feature:2424913-2425039:-1:exon
so has part: feature:2424720-2424807:-1:exon
so has part: feature:2423456-2423567:-1:exon
so has part: feature:2421390-2421548:-1:exon
so has part: feature:2420411-2420563:-1:exon
so has part: feature:2419823-2419930:-1:exon
so has part: feature:2419348-2419515:-1:exon
so has part: feature:2418760-2418910:-1:exon
so has part: feature:2415759-2418277:-1:exon

position:2429009:-1
position: 2429009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428655-2429009:-1:exon

position:2428655:-1
position: 2428655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2424913-2425039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2424720-2424807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423456-2423567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2421390-2421548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2420411-2420563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2419823-2419930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2419348-2419515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418760-2418910:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2415759-2418277:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X1
translation: MPGPRRSLASPVVSGVLCPCGSPRAGPATLASEAGGRSLCGGPEHRRLHTLFQKLDVNRDGALCVHDLAVGLGQLGLHRTERDLWKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIVGGFTHMIREGGPKSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLGIHERLVAGSLAGVIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILSKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVQSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2418093..2418277,2418760..2418910,2419348..2419515,2419823..2419930,2420411..2420563,2421390..2421548,2423456..2423567,2424720..2424807,2424913..2425039,2452065..2452319))
location: region:2418093-2452319:-1
so has part: feature:2452065-2452319:-1:exon
so has part: feature:2424913-2425039:-1:exon
so has part: feature:2424720-2424807:-1:exon
so has part: feature:2423456-2423567:-1:exon
so has part: feature:2421390-2421548:-1:exon
so has part: feature:2420411-2420563:-1:exon
so has part: feature:2419823-2419930:-1:exon
so has part: feature:2419348-2419515:-1:exon
so has part: feature:2418760-2418910:-1:exon
so has part: feature:2418093-2418277:-1:exon

XP_005293524.1
type: Protein
SIO_000068: ncbiprotein

position:2418093:-1
position: 2418093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452319:-1
position: 2452319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452065-2452319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2424913-2425039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2424720-2424807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423456-2423567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2421390-2421548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2420411-2420563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2419823-2419930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2419348-2419515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418760-2418910:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418093-2418277:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X2
translation: MLQTLWRFLSSLFTRAICQGPAEGKENGARETTPIPDPGDQGPNLLGKPQDRGADPTERRPTILLVVGPAEHFPKKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIVGGFTHMIREGGPKSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLGIHERLVAGSLAGVIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILSKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVQSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2418093..2418277,2418760..2418910,2419348..2419515,2419823..2419930,2420411..2420563,2421390..2421548,2423456..2423567,2424720..2424807,2424913..2425039,2436166..2436390))
location: region:2418093-2436390:-1
so has part: feature:2436166-2436390:-1:exon
so has part: feature:2424913-2425039:-1:exon
so has part: feature:2424720-2424807:-1:exon
so has part: feature:2423456-2423567:-1:exon
so has part: feature:2421390-2421548:-1:exon
so has part: feature:2420411-2420563:-1:exon
so has part: feature:2419823-2419930:-1:exon
so has part: feature:2419348-2419515:-1:exon
so has part: feature:2418760-2418910:-1:exon
so has part: feature:2418093-2418277:-1:exon

XP_005293525.1
type: Protein
SIO_000068: ncbiprotein

position:2436390:-1
position: 2436390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2436166-2436390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2424913-2425039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2424720-2424807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423456-2423567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2421390-2421548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2420411-2420563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2419823-2419930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2419348-2419515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418760-2418910:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418093-2418277:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X3
translation: MLCLCLYVPVFGESQTEFQYFESKGLPAQLKSIFRLSLFIPSEEFSTYRQWKQKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIVGGFTHMIREGGPKSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLGIHERLVAGSLAGVIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILSKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVQSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2418093..2418277,2418760..2418910,2419348..2419515,2419823..2419930,2420411..2420563,2421390..2421548,2423456..2423567,2424720..2424807,2424913..2425039,2428655..2428813))
location: region:2418093-2428813:-1
so has part: feature:2428655-2428813:-1:exon
so has part: feature:2424913-2425039:-1:exon
so has part: feature:2424720-2424807:-1:exon
so has part: feature:2423456-2423567:-1:exon
so has part: feature:2421390-2421548:-1:exon
so has part: feature:2420411-2420563:-1:exon
so has part: feature:2419823-2419930:-1:exon
so has part: feature:2419348-2419515:-1:exon
so has part: feature:2418760-2418910:-1:exon
so has part: feature:2418093-2418277:-1:exon

XP_005293527.1
type: Protein
SIO_000068: ncbiprotein

position:2428813:-1
position: 2428813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428655-2428813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2424913-2425039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2424720-2424807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423456-2423567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2421390-2421548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2420411-2420563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2419823-2419930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2419348-2419515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418760-2418910:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418093-2418277:-1:exon

NAIF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: NAIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2453491..2460831
location: region:2453491-2460831:1
so has part: feature:2453491-2460831:1:exon
subclass of: SO_0000010

101942467
type: Gene
SIO_000068: ncbigene

position:2453491:1
position: 2453491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2460831:1
position: 2460831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2453491-2460831:1:exon

NAIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: NAIF1
product: nuclear apoptosis inducing factor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169267.3
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(2453491..2454993,2458393..2460831)
location: region:2453491-2460831:1
so has part: feature:2453491-2454993:1:exon
so has part: feature:2458393-2460831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2453491-2454993:1:exon

position:2454993:1
position: 2454993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2458393-2460831:1:exon

position:2458393:1
position: 2458393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAIF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8478
gene: NAIF1
product: nuclear apoptosis inducing factor 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006175380.1
SIO_010081: NAIF1
so part of: NAIF1
location: join(2453491..2454993,2458393..2459287,2460159..2460831)
location: region:2453491-2460831:1
so has part: feature:2453491-2454993:1:exon
so has part: feature:2458393-2459287:1:exon
so has part: feature:2460159-2460831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2453491-2454993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2458393-2459287:1:exon

position:2459287:1
position: 2459287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2460159-2460831:1:exon

position:2460159:1
position: 2460159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: NAIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear apoptosis-inducing factor 1
translation: MAMASPLAPPAKKRKMNFSEREVEIIVEELERGKHLLINHFNAGVPLATKAAAWHDILRRVNAVATCRRELPEVKKKWSDLKTEVRRKVAQVRAAMEGGGIGQDGAGEGQDGEDPTGATATPVILTPMQQRICNLLGEATIISLPTGDCTAGDGAEIPIAASTTTVTLTQIPAETTYHSLEDGVVEYCTTEAPTTVTAEAPLEMMAHQAEASVKPQELKSRIALNSAKLLQEQRVTNLHVKEIAQHLEQQNDLLQMIRRSQEVQACAQERQAQAMEGTQAALSALIQILRPMIKDFRRFLQSNTPNPSVTADPSHVAQNGQQDGIIQ
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(2454483..2454993,2458393..2458865)
location: region:2454483-2458865:1
so has part: feature:2454483-2454993:1:exon
so has part: feature:2458393-2458865:1:exon

XP_008167489.1
type: Protein
SIO_000068: ncbiprotein

position:2454483:1
position: 2454483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458865:1
position: 2458865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2454483-2454993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2458393-2458865:1:exon

FAM102A
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: FAM102A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2468690..2518438
location: region:2468690-2518438:1
so has part: feature:2468690-2518438:1:exon
subclass of: SO_0000010

101942202
type: Gene
SIO_000068: ncbigene

position:2468690:1
position: 2468690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518438:1
position: 2518438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2468690-2518438:1:exon

FAM102A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: FAM102A
product: family with sequence similarity 102 member A, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854176.1
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(2468690..2468845,2469848..2470520,2499600..2499720,2500065..2500094,2505478..2505594,2506174..2506220,2508457..2508611,2510136..2510240,2510564..2510753,2510955..2511076,2512343..2512412,2513333..2518438)
location: region:2468690-2518438:1
so has part: feature:2468690-2468845:1:exon
so has part: feature:2469848-2470520:1:exon
so has part: feature:2499600-2499720:1:exon
so has part: feature:2500065-2500094:1:exon
so has part: feature:2505478-2505594:1:exon
so has part: feature:2506174-2506220:1:exon
so has part: feature:2508457-2508611:1:exon
so has part: feature:2510136-2510240:1:exon
so has part: feature:2510564-2510753:1:exon
so has part: feature:2510955-2511076:1:exon
so has part: feature:2512343-2512412:1:exon
so has part: feature:2513333-2518438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2468690-2468845:1:exon

position:2468845:1
position: 2468845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2469848-2470520:1:exon

position:2469848:1
position: 2469848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470520:1
position: 2470520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2499600-2499720:1:exon

position:2499600:1
position: 2499600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499720:1
position: 2499720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2500065-2500094:1:exon

position:2500065:1
position: 2500065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500094:1
position: 2500094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2505478-2505594:1:exon

position:2505478:1
position: 2505478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505594:1
position: 2505594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2506174-2506220:1:exon

position:2506174:1
position: 2506174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506220:1
position: 2506220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2508457-2508611:1:exon

position:2508457:1
position: 2508457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508611:1
position: 2508611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2510136-2510240:1:exon

position:2510136:1
position: 2510136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510240:1
position: 2510240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2510564-2510753:1:exon

position:2510564:1
position: 2510564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510753:1
position: 2510753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2510955-2511076:1:exon

position:2510955:1
position: 2510955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511076:1
position: 2511076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2512343-2512412:1:exon

position:2512343:1
position: 2512343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512412:1
position: 2512412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2513333-2518438:1:exon

position:2513333:1
position: 2513333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM102A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: FAM102A
product: family with sequence similarity 102 member A, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169266.3
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(2468696..2468845,2469781..2470520,2499600..2499720,2500065..2500094,2505478..2505594,2506174..2506220,2508457..2508611,2510136..2510240,2510564..2510753,2510955..2511076,2512343..2512412,2513333..2518438)
location: region:2468696-2518438:1
so has part: feature:2468696-2468845:1:exon
so has part: feature:2469781-2470520:1:exon
so has part: feature:2499600-2499720:1:exon
so has part: feature:2500065-2500094:1:exon
so has part: feature:2505478-2505594:1:exon
so has part: feature:2506174-2506220:1:exon
so has part: feature:2508457-2508611:1:exon
so has part: feature:2510136-2510240:1:exon
so has part: feature:2510564-2510753:1:exon
so has part: feature:2510955-2511076:1:exon
so has part: feature:2512343-2512412:1:exon
so has part: feature:2513333-2518438:1:exon

position:2468696:1
position: 2468696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2468696-2468845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2469781-2470520:1:exon

position:2469781:1
position: 2469781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2499600-2499720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2500065-2500094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505478-2505594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2506174-2506220:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2508457-2508611:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2510136-2510240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2510564-2510753:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2510955-2511076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2512343-2512412:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2513333-2518438:1:exon

FAM102A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: FAM102A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM102A
translation: MAFLMKKKKFKFQTSFTLEELTAVPFVNGVLFCKIRLLDGGDFVSSSSREEVQENCVRWKKKFTFVCKMSANPATGLLDPCICRVSVRKELKGGKTYSKLGFADLNLAEFAGSGFTVRCSLLEGYDTKNTRQDNSILKVTIGMSLLSGDPCFKTPPSTAKSVTIPGQDSSLQLTCKGEGTTSSISSSATIGPVRQAKSRPTILNPGVPEEPDQNLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHSRSSSMSDLTHRRNTSTSSSASGGLSLTVECPEGERDHKLDKPPRPPRPTILLDRSSRRKKDSVESHPSWVDDTRIDADDIVEKIMQSQDFTDVSNTEDSNLRLFVSRDGTTTLSGIQLGNRVSSGVYEPVVIETR
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(2470375..2470520,2499600..2499720,2500065..2500094,2505478..2505594,2506174..2506220,2508457..2508611,2510136..2510240,2510564..2510753,2510955..2511076,2512343..2512412,2513333..2513378)
location: region:2470375-2513378:1
so has part: feature:2470375-2470520:1:exon
so has part: feature:2499600-2499720:1:exon
so has part: feature:2500065-2500094:1:exon
so has part: feature:2505478-2505594:1:exon
so has part: feature:2506174-2506220:1:exon
so has part: feature:2508457-2508611:1:exon
so has part: feature:2510136-2510240:1:exon
so has part: feature:2510564-2510753:1:exon
so has part: feature:2510955-2511076:1:exon
so has part: feature:2512343-2512412:1:exon
so has part: feature:2513333-2513378:1:exon

XP_042710110.1
type: Protein
SIO_000068: ncbiprotein

position:2470375:1
position: 2470375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513378:1
position: 2513378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470375-2470520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2499600-2499720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500065-2500094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2505478-2505594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2506174-2506220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508457-2508611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2510136-2510240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2510564-2510753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2510955-2511076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2512343-2512412:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2513333-2513378:1:exon

FAM102A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: FAM102A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM102A
translation: MAFLMKKKKFKFQTSFTLEELTAVPFVNGVLFCKIRLLDGGDFVSSSSREEVQENCVRWKKKFTFVCKMSANPATGLLDPCICRVSVRKELKGGKTYSKLGFADLNLAEFAGSGFTVRCSLLEGYDTKNTRQDNSILKVTIGMSLLSGDPCFKTPPSTAKSVTIPGQDSSLQLTCKGEGTTSSISSSATIGPVRQAKSRPTILNPGVPEEPDQNLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHSRSSSMSDLTHRRNTSTSSSASGGLSLTVECPEGERDHKLDKPPRPPRPTILLDRSSRRKKDSVESHPSWVDDTRIDADDIVEKIMQSQDFTDVSNTEDSNLRLFVSRDGTTTLSGIQLGNRVSSGVYEPVVIETR
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(2470375..2470520,2499600..2499720,2500065..2500094,2505478..2505594,2506174..2506220,2508457..2508611,2510136..2510240,2510564..2510753,2510955..2511076,2512343..2512412,2513333..2513378)
location: region:2470375-2513378:1
so has part: feature:2470375-2470520:1:exon
so has part: feature:2499600-2499720:1:exon
so has part: feature:2500065-2500094:1:exon
so has part: feature:2505478-2505594:1:exon
so has part: feature:2506174-2506220:1:exon
so has part: feature:2508457-2508611:1:exon
so has part: feature:2510136-2510240:1:exon
so has part: feature:2510564-2510753:1:exon
so has part: feature:2510955-2511076:1:exon
so has part: feature:2512343-2512412:1:exon
so has part: feature:2513333-2513378:1:exon

XP_008167488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2470375-2470520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2499600-2499720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500065-2500094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2505478-2505594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2506174-2506220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508457-2508611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2510136-2510240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2510564-2510753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2510955-2511076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2512343-2512412:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2513333-2513378:1:exon

DPM2
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: DPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2532470..2538910
location: region:2532470-2538910:1
so has part: feature:2532470-2538910:1:exon
subclass of: SO_0000010

101941389
type: Gene
SIO_000068: ncbigene

position:2532470:1
position: 2532470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538910:1
position: 2538910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2532470-2538910:1:exon

DPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: DPM2
product: dolichyl-phosphate mannosyltransferase subunit 2, regulatory, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293461.3
SIO_010081: DPM2
subclass of: SO_0000673
so part of: DPM2
location: join(2532470..2532625,2535731..2535820,2537237..2537339,2537618..2538910)
location: region:2532470-2538910:1
so has part: feature:2532470-2532625:1:exon
so has part: feature:2535731-2535820:1:exon
so has part: feature:2537237-2537339:1:exon
so has part: feature:2537618-2538910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2532470-2532625:1:exon

position:2532625:1
position: 2532625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2535731-2535820:1:exon

position:2535731:1
position: 2535731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2535820:1
position: 2535820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2537237-2537339:1:exon

position:2537237:1
position: 2537237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537339:1
position: 2537339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2537618-2538910:1:exon

position:2537618:1
position: 2537618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: DPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichol phosphate-mannose biosynthesis regulatory protein isoform X1
translation: MMQLCWDNSRDAARPKCWLLIGPVLPEVSEPGGRAAGSQRQRSVGTMATAMDQLVGFGLVAFSLLLFVYYTIWIIILPFIDSDHGIHKFFLPREYSVTIPVIAGLLLVLFVGVFVVIVMWKNRKPAKKSD
SIO_010081: DPM2
subclass of: SO_0000673
so part of: DPM2
location: join(2532485..2532625,2535731..2535820,2537237..2537339,2537618..2537676)
location: region:2532485-2537676:1
so has part: feature:2532485-2532625:1:exon
so has part: feature:2535731-2535820:1:exon
so has part: feature:2537237-2537339:1:exon
so has part: feature:2537618-2537676:1:exon

XP_005293518.2
type: Protein
SIO_000068: ncbiprotein

position:2532485:1
position: 2532485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537676:1
position: 2537676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2532485-2532625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2535731-2535820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2537237-2537339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2537618-2537676:1:exon

DPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: DPM2
product: dolichyl-phosphate mannosyltransferase subunit 2, regulatory, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854177.1
SIO_010081: DPM2
subclass of: SO_0000673
so part of: DPM2
location: join(2534664..2534802,2535731..2535820,2537237..2537339,2537618..2538910)
location: region:2534664-2538910:1
so has part: feature:2534664-2534802:1:exon
so has part: feature:2535731-2535820:1:exon
so has part: feature:2537237-2537339:1:exon
so has part: feature:2537618-2538910:1:exon

position:2534664:1
position: 2534664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2534664-2534802:1:exon

position:2534802:1
position: 2534802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2535731-2535820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2537237-2537339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2537618-2538910:1:exon

DPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: DPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichol phosphate-mannose biosynthesis regulatory protein isoform X2
translation: MPGVRLVLHLLLSGPQGRATAMDQLVGFGLVAFSLLLFVYYTIWIIILPFIDSDHGIHKFFLPREYSVTIPVIAGLLLVLFVGVFVVIVMWKNRKPAKKSD
SIO_010081: DPM2
subclass of: SO_0000673
so part of: DPM2
location: join(2534749..2534802,2535731..2535820,2537237..2537339,2537618..2537676)
location: region:2534749-2537676:1
so has part: feature:2534749-2534802:1:exon
so has part: feature:2535731-2535820:1:exon
so has part: feature:2537237-2537339:1:exon
so has part: feature:2537618-2537676:1:exon

XP_042710111.1
type: Protein
SIO_000068: ncbiprotein

position:2534749:1
position: 2534749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2534749-2534802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2535731-2535820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2537237-2537339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2537618-2537676:1:exon

PIP5KL1
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: PIP5KL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2545792..2563038
location: region:2545792-2563038:1
so has part: feature:2545792-2563038:1:exon
subclass of: SO_0000010

101941106
type: Gene
SIO_000068: ncbigene

position:2545792:1
position: 2545792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563038:1
position: 2563038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2545792-2563038:1:exon

PIP5KL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: PIP5KL1
product: phosphatidylinositol-4-phosphate 5-kinase like 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293460.3
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2545792..2546198,2547575..2547711,2549610..2549804,2551056..2551106,2551626..2551780,2553646..2553770,2554330..2554364,2554473..2554528,2555044..2555156,2558273..2558435,2559188..2563038)
location: region:2545792-2563038:1
so has part: feature:2545792-2546198:1:exon
so has part: feature:2547575-2547711:1:exon
so has part: feature:2549610-2549804:1:exon
so has part: feature:2551056-2551106:1:exon
so has part: feature:2551626-2551780:1:exon
so has part: feature:2553646-2553770:1:exon
so has part: feature:2554330-2554364:1:exon
so has part: feature:2554473-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2563038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2545792-2546198:1:exon

position:2546198:1
position: 2546198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2547575-2547711:1:exon

position:2547575:1
position: 2547575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2547711:1
position: 2547711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2549610-2549804:1:exon

position:2549610:1
position: 2549610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2549804:1
position: 2549804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2551056-2551106:1:exon

position:2551056:1
position: 2551056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2551106:1
position: 2551106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2551626-2551780:1:exon

position:2551626:1
position: 2551626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2551780:1
position: 2551780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2553646-2553770:1:exon

position:2553646:1
position: 2553646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553770:1
position: 2553770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2554330-2554364:1:exon

position:2554330:1
position: 2554330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2554364:1
position: 2554364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2554473-2554528:1:exon

position:2554473:1
position: 2554473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2554528:1
position: 2554528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2555044-2555156:1:exon

position:2555044:1
position: 2555044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2555156:1
position: 2555156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2558273-2558435:1:exon

position:2558273:1
position: 2558273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2558435:1
position: 2558435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2559188-2563038:1:exon

position:2559188:1
position: 2559188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIP5KL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: PIP5KL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform X1
translation: MTDAPESTTGRRSRTLKHRFLWKLRQKWKLLGLFEINGEHEFYDLTCMLKVGLRAAIQEAIDNPPADVLSDADCKAVLKQAHEGFEMRTYGGPAFAHFRHSMGISETEYQLSLSSQSSYLQFISNSKSKADFFLTNNKCFFLKTQSKREIRFLLSNLPKYIQHLERYPHSLLVRFLGVHSIIVAQEKKKYFIIMQSVFYPDERILERYDIKGCQVNRWTEPAPEGSQVIVVLKDLNFEGNSIHLGQQRSWLLRQVQLDTQFLKELNVLDYSLLVAFQPLHADEKGQNLSFADIIFRTTMSLSKPENSLLTSVSGIVDEESDILVSEMVAGVDLYRLRELNSGMEDVSLQSSSKSDSDLARILAQNRRLLPRCKSPLHLLDGPEFRYFMGIIDLFTVYSFRKRLEHLWKCIRYRDQTFSTVSPSDYARRLCQWVESHTV
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2547709..2547711,2549610..2549804,2551056..2551106,2551626..2551780,2553646..2553770,2554330..2554364,2554473..2554528,2555044..2555156,2558273..2558435,2559188..2559608)
location: region:2547709-2559608:1
so has part: feature:2547709-2547711:1:exon
so has part: feature:2549610-2549804:1:exon
so has part: feature:2551056-2551106:1:exon
so has part: feature:2551626-2551780:1:exon
so has part: feature:2553646-2553770:1:exon
so has part: feature:2554330-2554364:1:exon
so has part: feature:2554473-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2559608:1:exon

XP_005293517.1
type: Protein
SIO_000068: ncbiprotein

position:2547709:1
position: 2547709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559608:1
position: 2559608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2547709-2547711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2549610-2549804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2551056-2551106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2551626-2551780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2553646-2553770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2554330-2554364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2554473-2554528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2555044-2555156:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2558273-2558435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2559188-2559608:1:exon

PIP5KL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: PIP5KL1
product: phosphatidylinositol-4-phosphate 5-kinase like 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106143.2
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2550062..2550200,2551056..2551106,2551626..2551780,2553646..2553770,2554330..2554364,2554473..2554528,2555044..2555156,2558273..2558435,2559188..2563038)
location: region:2550062-2563038:1
so has part: feature:2550062-2550200:1:exon
so has part: feature:2551056-2551106:1:exon
so has part: feature:2551626-2551780:1:exon
so has part: feature:2553646-2553770:1:exon
so has part: feature:2554330-2554364:1:exon
so has part: feature:2554473-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2563038:1:exon

position:2550062:1
position: 2550062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550062-2550200:1:exon

position:2550200:1
position: 2550200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2551056-2551106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2551626-2551780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553646-2553770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2554330-2554364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2554473-2554528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2555044-2555156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558273-2558435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2559188-2563038:1:exon

PIP5KL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: PIP5KL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform X3
translation: MHCLAGSPAQDVLSDADCKAVLKQAHEGFEMRTYGGPAFAHFRHSMGISETEYQLSLSSQSSYLQFISNSKSKADFFLTNNKCFFLKTQSKREIRFLLSNLPKYIQHLERYPHSLLVRFLGVHSIIVAQEKKKYFIIMQSVFYPDERILERYDIKGCQVNRWTEPAPEGSQVIVVLKDLNFEGNSIHLGQQRSWLLRQVQLDTQFLKELNVLDYSLLVAFQPLHADEKGQNLSFADIIFRTTMSLSKPENSLLTSVSGIVDEESDILVSEMVAGVDLYRLRELNSGMEDVSLQSSSKSDSDLARILAQNRRLLPRCKSPLHLLDGPEFRYFMGIIDLFTVYSFRKRLEHLWKCIRYRDQTFSTVSPSDYARRLCQWVESHTV
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2550171..2550200,2551056..2551106,2551626..2551780,2553646..2553770,2554330..2554364,2554473..2554528,2555044..2555156,2558273..2558435,2559188..2559608)
location: region:2550171-2559608:1
so has part: feature:2550171-2550200:1:exon
so has part: feature:2551056-2551106:1:exon
so has part: feature:2551626-2551780:1:exon
so has part: feature:2553646-2553770:1:exon
so has part: feature:2554330-2554364:1:exon
so has part: feature:2554473-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2559608:1:exon

XP_023961911.1
type: Protein
SIO_000068: ncbiprotein

position:2550171:1
position: 2550171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550171-2550200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2551056-2551106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2551626-2551780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553646-2553770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2554330-2554364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2554473-2554528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2555044-2555156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558273-2558435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2559188-2559608:1:exon

PIP5KL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: PIP5KL1
product: phosphatidylinositol-4-phosphate 5-kinase like 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854178.1
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2550317..2550653,2551056..2551106,2551626..2551780,2553646..2553770,2554330..2554364,2554473..2554528,2555044..2555156,2558273..2558435,2559188..2563038)
location: region:2550317-2563038:1
so has part: feature:2550317-2550653:1:exon
so has part: feature:2551056-2551106:1:exon
so has part: feature:2551626-2551780:1:exon
so has part: feature:2553646-2553770:1:exon
so has part: feature:2554330-2554364:1:exon
so has part: feature:2554473-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2563038:1:exon

position:2550317:1
position: 2550317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550317-2550653:1:exon

position:2550653:1
position: 2550653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2551056-2551106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2551626-2551780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553646-2553770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2554330-2554364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2554473-2554528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2555044-2555156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558273-2558435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2559188-2563038:1:exon

PIP5KL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: PIP5KL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform X2
translation: MGLRPYRGANGAGTAAPREPDDNRPLVKGLNNNKKPARSVALSKWRSLCQGAEIRQRREPEQHEDVLSDADCKAVLKQAHEGFEMRTYGGPAFAHFRHSMGISETEYQLSLSSQSSYLQFISNSKSKADFFLTNNKCFFLKTQSKREIRFLLSNLPKYIQHLERYPHSLLVRFLGVHSIIVAQEKKKYFIIMQSVFYPDERILERYDIKGCQVNRWTEPAPEGSQVIVVLKDLNFEGNSIHLGQQRSWLLRQVQLDTQFLKELNVLDYSLLVAFQPLHADEKGQNLSFADIIFRTTMSLSKPENSLLTSVSGIVDEESDILVSEMVAGVDLYRLRELNSGMEDVSLQSSSKSDSDLARILAQNRRLLPRCKSPLHLLDGPEFRYFMGIIDLFTVYSFRKRLEHLWKCIRYRDQTFSTVSPSDYARRLCQWVESHTV
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2550462..2550653,2551056..2551106,2551626..2551780,2553646..2553770,2554330..2554364,2554473..2554528,2555044..2555156,2558273..2558435,2559188..2559608)
location: region:2550462-2559608:1
so has part: feature:2550462-2550653:1:exon
so has part: feature:2551056-2551106:1:exon
so has part: feature:2551626-2551780:1:exon
so has part: feature:2553646-2553770:1:exon
so has part: feature:2554330-2554364:1:exon
so has part: feature:2554473-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2559608:1:exon

XP_042710112.1
type: Protein
SIO_000068: ncbiprotein

position:2550462:1
position: 2550462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550462-2550653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2551056-2551106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2551626-2551780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553646-2553770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2554330-2554364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2554473-2554528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2555044-2555156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558273-2558435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2559188-2559608:1:exon

PIP5KL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: PIP5KL1
product: phosphatidylinositol-4-phosphate 5-kinase like 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854179.1
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2553646..2553770,2554473..2554528,2555044..2555156,2558273..2558435,2559188..2563038)
location: region:2553646-2563038:1
so has part: feature:2553646-2553770:1:exon
so has part: feature:2554473-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2563038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2553646-2553770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2554473-2554528:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2555044-2555156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2558273-2558435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2559188-2563038:1:exon

PIP5KL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: PIP5KL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform X4
translation: MQSVFYPDERILERYDIKGCQVNRWTEPAPEGSQVIVVLKDLNFEGNSIHLGQQRSWLLRQVQLDTQFLKELNVLDYSLLVAFQPLHADEKGQNLSFADIIFRTTMSLSKPENSLLTSVSGIVDEESDILVSEMVAGVDLYRLRELNSGMEDVSLQSSSKSDSDLARILAQNRRLLPRCKSPLHLLDGPEFRYFMGIIDLFTVYSFRKRLEHLWKCIRYRDQTFSTVSPSDYARRLCQWVESHTV
SIO_010081: PIP5KL1
subclass of: SO_0000673
so part of: PIP5KL1
location: join(2554488..2554528,2555044..2555156,2558273..2558435,2559188..2559608)
location: region:2554488-2559608:1
so has part: feature:2554488-2554528:1:exon
so has part: feature:2555044-2555156:1:exon
so has part: feature:2558273-2558435:1:exon
so has part: feature:2559188-2559608:1:exon

XP_042710113.1
type: Protein
SIO_000068: ncbiprotein

position:2554488:1
position: 2554488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2554488-2554528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2555044-2555156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2558273-2558435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2559188-2559608:1:exon

ST6GALNAC4
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: ST6GALNAC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2566915..2581272
location: region:2566915-2581272:1
so has part: feature:2566915-2581272:1:exon
subclass of: SO_0000010

101940645
type: Gene
SIO_000068: ncbigene

position:2566915:1
position: 2566915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581272:1
position: 2581272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566915-2581272:1:exon

ST6GALNAC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC4
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854180.1
SIO_010081: ST6GALNAC4
subclass of: SO_0000673
so part of: ST6GALNAC4
location: join(2566915..2567082,2567805..2567879,2568693..2568755,2573743..2573916,2574748..2575160,2577455..2577562,2580878..2581272)
location: region:2566915-2581272:1
so has part: feature:2566915-2567082:1:exon
so has part: feature:2567805-2567879:1:exon
so has part: feature:2568693-2568755:1:exon
so has part: feature:2573743-2573916:1:exon
so has part: feature:2574748-2575160:1:exon
so has part: feature:2577455-2577562:1:exon
so has part: feature:2580878-2581272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2566915-2567082:1:exon

position:2567082:1
position: 2567082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2567805-2567879:1:exon

position:2567805:1
position: 2567805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2567879:1
position: 2567879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2568693-2568755:1:exon

position:2568693:1
position: 2568693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2568755:1
position: 2568755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2573743-2573916:1:exon

position:2573743:1
position: 2573743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2573916:1
position: 2573916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2574748-2575160:1:exon

position:2574748:1
position: 2574748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2575160:1
position: 2575160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2577455-2577562:1:exon

position:2577455:1
position: 2577455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2577562:1
position: 2577562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2580878-2581272:1:exon

position:2580878:1
position: 2580878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST6GALNAC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC4
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293459.4
SIO_010081: ST6GALNAC4
subclass of: SO_0000673
so part of: ST6GALNAC4
location: join(2566918..2567082,2567805..2567879,2568693..2568755,2573743..2573916,2574748..2575160,2577455..2577562,2578462..2581272)
location: region:2566918-2581272:1
so has part: feature:2566918-2567082:1:exon
so has part: feature:2567805-2567879:1:exon
so has part: feature:2568693-2568755:1:exon
so has part: feature:2573743-2573916:1:exon
so has part: feature:2574748-2575160:1:exon
so has part: feature:2577455-2577562:1:exon
so has part: feature:2578462-2581272:1:exon

position:2566918:1
position: 2566918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566918-2567082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567805-2567879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2568693-2568755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2573743-2573916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2574748-2575160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2577455-2577562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2578462-2581272:1:exon

position:2578462:1
position: 2578462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST6GALNAC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2
translation: MKPHSSPARQGAVPESQDKPGADKTLKLKTLVHLFLTLVILSACTVLYILLCSQLRWFSYPQLEEHKRPLVMVSGALSFEGYSRVPDGKPLVRAQCRQCALVSSSGQMLGSRLGKEIDQMECVLRMNQAPTNGYEEDVGTKSTIRVVSHTSIPLLLRNQSYFFKQSWKTIYIVWGPMRKMSREKGGLTYRILQEMKEMYPSLQIYTLTERMMAYCDEVFQVETGKNRMKSGSFLSTGWFTMILAMELCEQIFVFGMVSDSYCRGFKPRQL
SIO_010081: ST6GALNAC4
subclass of: SO_0000673
so part of: ST6GALNAC4
location: join(2567850..2567879,2568693..2568755,2573743..2573916,2574748..2575160,2577455..2577562,2580878..2580902)
location: region:2567850-2580902:1
so has part: feature:2567850-2567879:1:exon
so has part: feature:2568693-2568755:1:exon
so has part: feature:2573743-2573916:1:exon
so has part: feature:2574748-2575160:1:exon
so has part: feature:2577455-2577562:1:exon
so has part: feature:2580878-2580902:1:exon

XP_042710114.1
type: Protein
SIO_000068: ncbiprotein

position:2567850:1
position: 2567850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580902:1
position: 2580902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2567850-2567879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2568693-2568755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2573743-2573916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2574748-2575160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2577455-2577562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2580878-2580902:1:exon

ST6GALNAC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1
translation: MKPHSSPARQGAVPESQDKPGADKTLKLKTLVHLFLTLVILSACTVLYILLCSQLRWFSYPQLEEHKRPLVMVSGALSFEGYSRVPDGKPLVRAQCRQCALVSSSGQMLGSRLGKEIDQMECVLRMNQAPTNGYEEDVGTKSTIRVVSHTSIPLLLRNQSYFFKQSWKTIYIVWGPMRKMSREKGGLTYRILQEMKEMYPSLQIYTLTERMMAYCDEVFQVETGKNRMKSGSFLSTGWFTMILAMELCEQIFVFGMVSDSYCREKNHPRVPYHYFEKGKLDECRMYLAHERAPRGGHRFITEKTVFSHWAKTRNIVFNHTSWVGG
SIO_010081: ST6GALNAC4
subclass of: SO_0000673
so part of: ST6GALNAC4
location: join(2567850..2567879,2568693..2568755,2573743..2573916,2574748..2575160,2577455..2577562,2578462..2578651)
location: region:2567850-2578651:1
so has part: feature:2567850-2567879:1:exon
so has part: feature:2568693-2568755:1:exon
so has part: feature:2573743-2573916:1:exon
so has part: feature:2574748-2575160:1:exon
so has part: feature:2577455-2577562:1:exon
so has part: feature:2578462-2578651:1:exon

XP_005293516.2
type: Protein
SIO_000068: ncbiprotein

position:2578651:1
position: 2578651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2567850-2567879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2568693-2568755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2573743-2573916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2574748-2575160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2577455-2577562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2578462-2578651:1:exon

ST6GALNAC6
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2584976..2601910
location: region:2584976-2601910:1
so has part: feature:2584976-2601910:1:exon
subclass of: SO_0000010

101940021
type: Gene
SIO_000068: ncbigene

position:2584976:1
position: 2584976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601910:1
position: 2601910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2584976-2601910:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169261.3
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2584976..2585151,2585673..2585921,2586536..2586693,2590450..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2584976-2601910:1
so has part: feature:2584976-2585151:1:exon
so has part: feature:2585673-2585921:1:exon
so has part: feature:2586536-2586693:1:exon
so has part: feature:2590450-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2584976-2585151:1:exon

position:2585151:1
position: 2585151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2585673-2585921:1:exon

position:2585673:1
position: 2585673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585921:1
position: 2585921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2586536-2586693:1:exon

position:2586536:1
position: 2586536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2586693:1
position: 2586693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2590450-2590514:1:exon

position:2590450:1
position: 2590450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590514:1
position: 2590514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2597277-2597456:1:exon

position:2597277:1
position: 2597277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597456:1
position: 2597456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2598484-2598881:1:exon

position:2598484:1
position: 2598484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2598881:1
position: 2598881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2600941-2601048:1:exon

position:2600941:1
position: 2600941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601048:1
position: 2601048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2601151-2601910:1:exon

position:2601151:1
position: 2601151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169260.3
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2584976..2585151,2585673..2585921,2586599..2586693,2590450..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2584976-2601910:1
so has part: feature:2584976-2585151:1:exon
so has part: feature:2585673-2585921:1:exon
so has part: feature:2586599-2586693:1:exon
so has part: feature:2590450-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2584976-2585151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2585673-2585921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2586599-2586693:1:exon

position:2586599:1
position: 2586599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2590450-2590514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169263.3
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2584976..2585151,2590450..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2584976-2601910:1
so has part: feature:2584976-2585151:1:exon
so has part: feature:2590450-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2584976-2585151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2590450-2590514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169262.3
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2584977..2585151,2585673..2585921,2590450..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2584977-2601910:1
so has part: feature:2584977-2585151:1:exon
so has part: feature:2585673-2585921:1:exon
so has part: feature:2590450-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

position:2584977:1
position: 2584977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2584977-2585151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2585673-2585921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2590450-2590514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854183.1
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2585153..2585278,2585673..2585921,2590450..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2585153-2601910:1
so has part: feature:2585153-2585278:1:exon
so has part: feature:2585673-2585921:1:exon
so has part: feature:2590450-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

position:2585153:1
position: 2585153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585153-2585278:1:exon

position:2585278:1
position: 2585278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2585673-2585921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2590450-2590514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854184.1
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2586733..2586751,2590450..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2586733-2601910:1
so has part: feature:2586733-2586751:1:exon
so has part: feature:2590450-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

position:2586733:1
position: 2586733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586733-2586751:1:exon

position:2586751:1
position: 2586751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2590450-2590514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106140.1
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2586772..2586790,2590450..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2586772-2601910:1
so has part: feature:2586772-2586790:1:exon
so has part: feature:2590450-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

position:2586772:1
position: 2586772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586772-2586790:1:exon

position:2586790:1
position: 2586790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2590450-2590514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3
translation: MSNNTGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590500..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590500-2601340:1
so has part: feature:2590500-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_023961908.1
type: Protein
SIO_000068: ncbiprotein

position:2590500:1
position: 2590500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601340:1
position: 2601340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2590500-2590514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3
translation: MSNNTGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590500..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590500-2601340:1
so has part: feature:2590500-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_042710117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2590500-2590514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3
translation: MSNNTGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590500..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590500-2601340:1
so has part: feature:2590500-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_042710118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2590500-2590514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3
translation: MSNNTGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590500..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590500-2601340:1
so has part: feature:2590500-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_008167482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2590500-2590514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3
translation: MSNNTGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590500..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590500-2601340:1
so has part: feature:2590500-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_008167483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2590500-2590514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3
translation: MSNNTGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590500..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590500-2601340:1
so has part: feature:2590500-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_008167484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2590500-2590514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3
translation: MSNNTGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590500..2590514,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590500-2601340:1
so has part: feature:2590500-2590514:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_008167485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2590500-2590514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854182.1
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590562..2590707,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2590562-2601910:1
so has part: feature:2590562-2590707:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

position:2590562:1
position: 2590562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2590562-2590707:1:exon

position:2590707:1
position: 2590707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X2
translation: MMFSPRHRWRKLKPEGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2590663..2590707,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2590663-2601340:1
so has part: feature:2590663-2590707:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_042710116.1
type: Protein
SIO_000068: ncbiprotein

position:2590663:1
position: 2590663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2590663-2590707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854181.1
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2592764..2593120,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601910)
location: region:2592764-2601910:1
so has part: feature:2592764-2593120:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601910:1:exon

position:2592764:1
position: 2592764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2592764-2593120:1:exon

position:2593120:1
position: 2593120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601910:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1
translation: MRNYMTSCCNAIQDLRAWRGQRTAIFVVLFALIMLLIIYSSNSGNEVFHYTALRGKSHRPPNLKKWGVKSGYLPVYGNKSLNSHCHQCVIITSSSHLLGSKLGSEIDQSECVLRMNDAPTTGYEADVGNKTTVRVVAHSSVYRVLKKPQEFVNKTPETILIFWGPPSKMQKSLLKILQHVSMSFPNMSAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDKVHVYGMVPPNYCSRRPQPGKMAYHYYEPKGPDECTTYIHNERSHKGNHHRFITEKRVFASWASLYNITFSHPAWD
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(2593064..2593120,2597277..2597456,2598484..2598881,2600941..2601048,2601151..2601340)
location: region:2593064-2601340:1
so has part: feature:2593064-2593120:1:exon
so has part: feature:2597277-2597456:1:exon
so has part: feature:2598484-2598881:1:exon
so has part: feature:2600941-2601048:1:exon
so has part: feature:2601151-2601340:1:exon

XP_042710115.1
type: Protein
SIO_000068: ncbiprotein

position:2593064:1
position: 2593064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2593064-2593120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597277-2597456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2598484-2598881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2600941-2601048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601151-2601340:1:exon

AK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2609143..2644012
location: region:2609143-2644012:1
so has part: feature:2609143-2644012:1:exon
subclass of: SO_0000010

101939006
type: Gene
SIO_000068: ncbigene

position:2609143:1
position: 2609143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2644012:1
position: 2644012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2609143-2644012:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: AK1
product: adenylate kinase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293450.3
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2609143..2609291,2615886..2616072,2616989..2617150,2618117..2618289,2618525..2618638,2619591..2619782,2620187..2620277,2621661..2621740,2633532..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2644012)
location: region:2609143-2644012:1
so has part: feature:2609143-2609291:1:exon
so has part: feature:2615886-2616072:1:exon
so has part: feature:2616989-2617150:1:exon
so has part: feature:2618117-2618289:1:exon
so has part: feature:2618525-2618638:1:exon
so has part: feature:2619591-2619782:1:exon
so has part: feature:2620187-2620277:1:exon
so has part: feature:2621661-2621740:1:exon
so has part: feature:2633532-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2644012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2609143-2609291:1:exon

position:2609291:1
position: 2609291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2615886-2616072:1:exon

position:2615886:1
position: 2615886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616072:1
position: 2616072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2616989-2617150:1:exon

position:2616989:1
position: 2616989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2617150:1
position: 2617150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2618117-2618289:1:exon

position:2618117:1
position: 2618117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2618289:1
position: 2618289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2618525-2618638:1:exon

position:2618525:1
position: 2618525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2618638:1
position: 2618638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2619591-2619782:1:exon

position:2619591:1
position: 2619591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2619782:1
position: 2619782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2620187-2620277:1:exon

position:2620187:1
position: 2620187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2620277:1
position: 2620277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2621661-2621740:1:exon

position:2621661:1
position: 2621661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2621740:1
position: 2621740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2633532-2633574:1:exon

position:2633532:1
position: 2633532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2633574:1
position: 2633574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2638015-2638050:1:exon

position:2638015:1
position: 2638015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2638050:1
position: 2638050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2638907-2639070:1:exon

position:2638907:1
position: 2638907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2639070:1
position: 2639070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2639685-2639801:1:exon

position:2639685:1
position: 2639685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2639801:1
position: 2639801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2641700-2641891:1:exon

position:2641700:1
position: 2641700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2641891:1
position: 2641891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2642484-2644012:1:exon

position:2642484:1
position: 2642484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1 isoform X1
translation: MTAAEAKDYLSRRAIPQLFESMLTGLMYYCPEDPIDYLERCLQKVRELGGPEKVQWDTFIGQERRTLPPINGGQGKKPIFWTDPLAGPYRRYGCLPPIQSQFSIESDSDMTESTGLIQEYDVFDPSRPRPKIIFVIGGPGSGKGTQSTKMASHFGFVCISVGEILRNQLIHHATSDGKWELIAKIIANGELAPPETTIEELKQQFIKQQDANGFVVDGFPREIGQAFTFEEQIGSPDLVVFLACSNQRLRQRLEKRAQEQGRPDDNAHAIDRRVETFKQNIPLIVKYYQDKSVIVRFDADREEDDVFGDISSMVQERLFPRGIDAAGSPQLALLDSPYGADREQPQEEDEEGQTEELLCPDLLSMATEKLKNSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVNSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLDTYYKATEPVITFYEKRGIVRKLNAEGSVDDVFVQVCTHLDALK
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2609232..2609291,2615886..2616072,2616989..2617150,2618117..2618289,2618525..2618638,2619591..2619782,2620187..2620277,2621661..2621740,2633532..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2642552)
location: region:2609232-2642552:1
so has part: feature:2609232-2609291:1:exon
so has part: feature:2615886-2616072:1:exon
so has part: feature:2616989-2617150:1:exon
so has part: feature:2618117-2618289:1:exon
so has part: feature:2618525-2618638:1:exon
so has part: feature:2619591-2619782:1:exon
so has part: feature:2620187-2620277:1:exon
so has part: feature:2621661-2621740:1:exon
so has part: feature:2633532-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2642552:1:exon

XP_005293507.1
type: Protein
SIO_000068: ncbiprotein

position:2609232:1
position: 2609232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2642552:1
position: 2642552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2609232-2609291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2615886-2616072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2616989-2617150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2618117-2618289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2618525-2618638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2619591-2619782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2620187-2620277:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2621661-2621740:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2633532-2633574:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2642484-2642552:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: AK1
product: adenylate kinase 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293453.4
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2624487..2624639,2633532..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2644012)
location: region:2624487-2644012:1
so has part: feature:2624487-2624639:1:exon
so has part: feature:2633532-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2644012:1:exon

position:2624487:1
position: 2624487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2624487-2624639:1:exon

position:2624639:1
position: 2624639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2633532-2633574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2642484-2644012:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: AK1
product: adenylate kinase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293451.4
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2624913..2625104,2633532..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2644012)
location: region:2624913-2644012:1
so has part: feature:2624913-2625104:1:exon
so has part: feature:2633532-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2644012:1:exon

position:2624913:1
position: 2624913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2624913-2625104:1:exon

position:2625104:1
position: 2625104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2633532-2633574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2642484-2644012:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1 isoform X2
translation: MTISTFPHTQTEELLCPDLLSMATEKLKNSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVNSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLDTYYKATEPVITFYEKRGIVRKLNAEGSVDDVFVQVCTHLDALK
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2625075..2625104,2633532..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2642552)
location: region:2625075-2642552:1
so has part: feature:2625075-2625104:1:exon
so has part: feature:2633532-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2642552:1:exon

XP_005293508.1
type: Protein
SIO_000068: ncbiprotein

position:2625075:1
position: 2625075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625075-2625104:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2633532-2633574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2642484-2642552:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: AK1
product: adenylate kinase 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106137.1
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2632655..2632745,2633532..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2644012)
location: region:2632655-2644012:1
so has part: feature:2632655-2632745:1:exon
so has part: feature:2633532-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2644012:1:exon

position:2632655:1
position: 2632655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2632655-2632745:1:exon

position:2632745:1
position: 2632745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2633532-2633574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2642484-2644012:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: AK1
product: adenylate kinase 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293454.4
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2632847..2632946,2633532..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2644012)
location: region:2632847-2644012:1
so has part: feature:2632847-2632946:1:exon
so has part: feature:2633532-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2644012:1:exon

position:2632847:1
position: 2632847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2632847-2632946:1:exon

position:2632946:1
position: 2632946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2633532-2633574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2642484-2644012:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1 isoform X4
translation: MATEKLKNSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVNSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLDTYYKATEPVITFYEKRGIVRKLNAEGSVDDVFVQVCTHLDALK
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2633565..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2642552)
location: region:2633565-2642552:1
so has part: feature:2633565-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2642552:1:exon

XP_023961905.1
type: Protein
SIO_000068: ncbiprotein

position:2633565:1
position: 2633565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2633565-2633574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2642484-2642552:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1 isoform X4
translation: MATEKLKNSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVNSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLDTYYKATEPVITFYEKRGIVRKLNAEGSVDDVFVQVCTHLDALK
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2633565..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2642552)
location: region:2633565-2642552:1
so has part: feature:2633565-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2642552:1:exon

XP_005293510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2633565-2633574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2642484-2642552:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1 isoform X4
translation: MATEKLKNSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVNSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLDTYYKATEPVITFYEKRGIVRKLNAEGSVDDVFVQVCTHLDALK
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2633565..2633574,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2642552)
location: region:2633565-2642552:1
so has part: feature:2633565-2633574:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2642552:1:exon

XP_005293511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2633565-2633574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2642484-2642552:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: AK1
product: adenylate kinase 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293452.4
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2637520..2637768,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2644012)
location: region:2637520-2644012:1
so has part: feature:2637520-2637768:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2644012:1:exon

position:2637520:1
position: 2637520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2637520-2637768:1:exon

position:2637768:1
position: 2637768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2642484-2644012:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1 isoform X3
translation: MGTECSCLATAAERAGKEKLKNSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVNSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLDTYYKATEPVITFYEKRGIVRKLNAEGSVDDVFVQVCTHLDALK
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(2637717..2637768,2638015..2638050,2638907..2639070,2639685..2639801,2641700..2641891,2642484..2642552)
location: region:2637717-2642552:1
so has part: feature:2637717-2637768:1:exon
so has part: feature:2638015-2638050:1:exon
so has part: feature:2638907-2639070:1:exon
so has part: feature:2639685-2639801:1:exon
so has part: feature:2641700-2641891:1:exon
so has part: feature:2642484-2642552:1:exon

XP_005293509.1
type: Protein
SIO_000068: ncbiprotein

position:2637717:1
position: 2637717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2637717-2637768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638015-2638050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638907-2639070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639685-2639801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641700-2641891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2642484-2642552:1:exon

ENG
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: ENG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2655523..2714350
location: region:2655523-2714350:1
so has part: feature:2655523-2714350:1:exon
subclass of: SO_0000010

101938731
type: Gene
SIO_000068: ncbigene

position:2655523:1
position: 2655523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2714350:1
position: 2714350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655523-2714350:1:exon

ENG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: ENG
product: endoglin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169258.3
SIO_010081: ENG
subclass of: SO_0000673
so part of: ENG
location: join(2655523..2655914,2672782..2672933,2685795..2685932,2691213..2691369,2692165..2692330,2693273..2693411,2694432..2694606,2695502..2695644,2695940..2696080,2700208..2700246,2702703..2702816,2706621..2706875,2707648..2707708,2712071..2712166,2713001..2714350)
location: region:2655523-2714350:1
so has part: feature:2655523-2655914:1:exon
so has part: feature:2672782-2672933:1:exon
so has part: feature:2685795-2685932:1:exon
so has part: feature:2691213-2691369:1:exon
so has part: feature:2692165-2692330:1:exon
so has part: feature:2693273-2693411:1:exon
so has part: feature:2694432-2694606:1:exon
so has part: feature:2695502-2695644:1:exon
so has part: feature:2695940-2696080:1:exon
so has part: feature:2700208-2700246:1:exon
so has part: feature:2702703-2702816:1:exon
so has part: feature:2706621-2706875:1:exon
so has part: feature:2707648-2707708:1:exon
so has part: feature:2712071-2712166:1:exon
so has part: feature:2713001-2714350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2655523-2655914:1:exon

position:2655914:1
position: 2655914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2672782-2672933:1:exon

position:2672782:1
position: 2672782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2672933:1
position: 2672933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2685795-2685932:1:exon

position:2685795:1
position: 2685795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685932:1
position: 2685932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2691213-2691369:1:exon

position:2691213:1
position: 2691213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691369:1
position: 2691369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2692165-2692330:1:exon

position:2692165:1
position: 2692165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692330:1
position: 2692330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2693273-2693411:1:exon

position:2693273:1
position: 2693273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693411:1
position: 2693411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2694432-2694606:1:exon

position:2694432:1
position: 2694432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2694606:1
position: 2694606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2695502-2695644:1:exon

position:2695502:1
position: 2695502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2695644:1
position: 2695644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2695940-2696080:1:exon

position:2695940:1
position: 2695940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2696080:1
position: 2696080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2700208-2700246:1:exon

position:2700208:1
position: 2700208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2700246:1
position: 2700246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2702703-2702816:1:exon

position:2702703:1
position: 2702703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2702816:1
position: 2702816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2706621-2706875:1:exon

position:2706621:1
position: 2706621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706875:1
position: 2706875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2707648-2707708:1:exon

position:2707648:1
position: 2707648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707708:1
position: 2707708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2712071-2712166:1:exon

position:2712071:1
position: 2712071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2712166:1
position: 2712166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2713001-2714350:1:exon

position:2713001:1
position: 2713001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: ENG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoglin
translation: MEAGLFLAALLLSCTPIRTSPTTADVCTLQQLAKDKVSYTTAKAVNGCVSRSTVGKPQEVHVLQVKIEKQMWQFQLNVSSAGRTTPPERKVLFVIICDKYCLVTVHSGDLHPTYVSNNLVLGVTDNMSRAFEDTSGEQLVQRVKEHYGGITSFTELKNPHHIHFRVGEDASSPEDCIVQPGFNAQRYLQTEFLVQEVKGCTSPGAKKGKEAHILRMQQGPAETSSQPVEVKVNVVCPEAKPLQDLTILLILQSQPSVTWNIDTQRTVSIMASGKHRISRFPSEQLDERVLPDSEQGLIGLAHDKGFDDIASYTDIPSATHVTLELHRCEPEVKTLPPPPAQRPDAVNIVQTFFSLFPPWKCTDDSIEIVMPKMNLQDLNDYITDITLQDPRCRAEQNQTHFVLRRYLGDCHTKLESDILARNKLILTLASSLEQVEVPFECSLPPELRLQLYRTQDFKWPSTTVLEVNKAAYVQVSFRAGSAQRFLDVKECSLQTATEEPQQLLIPPVAPLGQAVTVLKPTEATLGRELHRFSFVYSLAGGGPFPPCATLSCRVAWHVNGSTSVATLEVTLQDTRPPPSSLGIEAVVGITFAAFLIGTLLTAALWCIYSHTRPMAKLQPVATNAPASESSSPNHSIGSTQSTPCSTSSMA
SIO_010081: ENG
subclass of: SO_0000673
so part of: ENG
location: join(2655857..2655914,2672782..2672933,2685795..2685932,2691213..2691369,2692165..2692330,2693273..2693411,2694432..2694606,2695502..2695644,2695940..2696080,2700208..2700246,2702703..2702816,2706621..2706875,2707648..2707708,2712071..2712166,2713001..2713119)
location: region:2655857-2713119:1
so has part: feature:2655857-2655914:1:exon
so has part: feature:2672782-2672933:1:exon
so has part: feature:2685795-2685932:1:exon
so has part: feature:2691213-2691369:1:exon
so has part: feature:2692165-2692330:1:exon
so has part: feature:2693273-2693411:1:exon
so has part: feature:2694432-2694606:1:exon
so has part: feature:2695502-2695644:1:exon
so has part: feature:2695940-2696080:1:exon
so has part: feature:2700208-2700246:1:exon
so has part: feature:2702703-2702816:1:exon
so has part: feature:2706621-2706875:1:exon
so has part: feature:2707648-2707708:1:exon
so has part: feature:2712071-2712166:1:exon
so has part: feature:2713001-2713119:1:exon

XP_008167480.1
type: Protein
SIO_000068: ncbiprotein

position:2655857:1
position: 2655857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713119:1
position: 2713119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655857-2655914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2672782-2672933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2685795-2685932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691213-2691369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2692165-2692330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2693273-2693411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2694432-2694606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2695502-2695644:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2695940-2696080:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2700208-2700246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2702703-2702816:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2706621-2706875:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2707648-2707708:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2712071-2712166:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2713001-2713119:1:exon

FPGS
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2717267..2736543)
location: region:2717267-2736543:-1
so has part: feature:2717267-2736543:-1:exon
subclass of: SO_0000010

101938463
type: Gene
SIO_000068: ncbigene

position:2717267:-1
position: 2717267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736543:-1
position: 2736543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2717267-2736543:-1:exon

FPGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: FPGS
product: folylpolyglutamate synthase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854190.1
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2717267..2720702,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2736402..2736543))
location: region:2717267-2736543:-1
so has part: feature:2736402-2736543:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2717267-2720702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2736402-2736543:-1:exon

position:2736402:-1
position: 2736402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

position:2729099:-1
position: 2729099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2729227:-1
position: 2729227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

position:2728815:-1
position: 2728815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728868:-1
position: 2728868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

position:2728458:-1
position: 2728458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728522:-1
position: 2728522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

position:2728230:-1
position: 2728230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728344:-1
position: 2728344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

position:2727570:-1
position: 2727570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727647:-1
position: 2727647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

position:2727393:-1
position: 2727393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727454:-1
position: 2727454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

position:2726851:-1
position: 2726851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726953:-1
position: 2726953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

position:2726440:-1
position: 2726440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726517:-1
position: 2726517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

position:2725764:-1
position: 2725764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725911:-1
position: 2725911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

position:2724072:-1
position: 2724072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724173:-1
position: 2724173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

position:2722873:-1
position: 2722873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723023:-1
position: 2723023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

position:2722316:-1
position: 2722316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2722391:-1
position: 2722391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

position:2721287:-1
position: 2721287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721353:-1
position: 2721353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2717267-2720702:-1:exon

position:2720702:-1
position: 2720702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FPGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: FPGS
product: folylpolyglutamate synthase, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854191.1
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2717267..2720702,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2735478..2735553,2736402..2736479))
location: region:2717267-2736479:-1
so has part: feature:2736402-2736479:-1:exon
so has part: feature:2735478-2735553:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2717267-2720702:-1:exon

position:2736479:-1
position: 2736479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736402-2736479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735478-2735553:-1:exon

position:2735478:-1
position: 2735478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735553:-1
position: 2735553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2717267-2720702:-1:exon

FPGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: FPGS
product: folylpolyglutamate synthase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854189.1
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2717267..2720702,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2733399..2733593))
location: region:2717267-2733593:-1
so has part: feature:2733399-2733593:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2717267-2720702:-1:exon

position:2733593:-1
position: 2733593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2733399-2733593:-1:exon

position:2733399:-1
position: 2733399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717267-2720702:-1:exon

FPGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folylpolyglutamate synthase, mitochondrial isoform X2
translation: MKLASEQKVRMIKDMCKDAIRTLNTLQTNANYLEQVKRERGDPQVQLEAMKGFLERSGLKVEDLDQLNIIHVTGTKGKGSTCAFTERILRNYGLKTGFYSSPHLVQVRERIRINGQPISKELFSKYFWQVYNRLEETKDPGHASMPAYFRFLTIMAFHVFLQEKVDLAVVEVGIGGAYDCTNIIRKPIVCGVSSLGIDHTSILGDTIEKIAWQKGGIFKPGVPAFTVPQPERPLEVLRERARESPCPLYLCPDLEAFEEDDKALQLGLAGEHQRSNATLALQLSRAWLQQQGYQGTGELKDLQPGAELLGKRPVPLAPAFRPSGSMVQGLQDTEWLGRTQVLQHGAVTWFIDGAHTTSSVQACVRWFRQAALNEEKPVDGSELRVLLFNATGDRDMGALLKLLVPCRFDYAVFCPNFTEVSAVGNAARCSPLCRPTELQRHPGEHADPLPGEPEEVEPADGGEGGAGPLAVSPHAGGGGGWPAEARPLARPPALRALFRAPSQLQLAGVPLHLSRPAVDHPGQGPALPGTRHQGAPPAPRGGHRRCLAQGSGCHPRAGHGKPAPGGRCLEAARPIALAVAGACGRGLRAALCCLLEYSQAPFTRCSLSLLPPEWDASGSGAGHCTCCWGSPAETFAAAGSTPRTGIGTASVHAPAPGSRAEPLTAAPAAPWHQDSPVQPQATPPPPPAGSFRQCRDLVTALMLVV
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2719864..2720702,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2736402..2736452))
location: region:2719864-2736452:-1
so has part: feature:2736402-2736452:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2719864-2720702:-1:exon

XP_042710124.1
type: Protein
SIO_000068: ncbiprotein

position:2719864:-1
position: 2719864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736452:-1
position: 2736452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736402-2736452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2719864-2720702:-1:exon

FPGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folylpolyglutamate synthase, mitochondrial isoform X3
translation: MWWSCPYTRRIEMDAIRTLNTLQTNANYLEQVKRERGDPQVQLEAMKGFLERSGLKVEDLDQLNIIHVTGTKGKGSTCAFTERILRNYGLKTGFYSSPHLVQVRERIRINGQPISKELFSKYFWQVYNRLEETKDPGHASMPAYFRFLTIMAFHVFLQEKVDLAVVEVGIGGAYDCTNIIRKPIVCGVSSLGIDHTSILGDTIEKIAWQKGGIFKPGVPAFTVPQPERPLEVLRERARESPCPLYLCPDLEAFEEDDKALQLGLAGEHQRSNATLALQLSRAWLQQQGYQGTGELKDLQPGAELLGKRPVPLAPAFRPSGSMVQGLQDTEWLGRTQVLQHGAVTWFIDGAHTTSSVQACVRWFRQAALNEEKPVDGSELRVLLFNATGDRDMGALLKLLVPCRFDYAVFCPNFTEVSAVGNAARCSPLCRPTELQRHPGEHADPLPGEPEEVEPADGGEGGAGPLAVSPHAGGGGGWPAEARPLARPPALRALFRAPSQLQLAGVPLHLSRPAVDHPGQGPALPGTRHQGAPPAPRGGHRRCLAQGSGCHPRAGHGKPAPGGRCLEAARPIALAVAGACGRGLRAALCCLLEYSQAPFTRCSLSLLPPEWDASGSGAGHCTCCWGSPAETFAAAGSTPRTGIGTASVHAPAPGSRAEPLTAAPAAPWHQDSPVQPQATPPPPPAGSFRQCRDLVTALMLVV
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2719864..2720702,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2735478..2735516))
location: region:2719864-2735516:-1
so has part: feature:2735478-2735516:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2719864-2720702:-1:exon

XP_042710125.1
type: Protein
SIO_000068: ncbiprotein

position:2735516:-1
position: 2735516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735478-2735516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2719864-2720702:-1:exon

FPGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folylpolyglutamate synthase, mitochondrial isoform X1
translation: MGFRGLRGLHSALRLVAEAAGGQRCFSTRPARVPRMEYQDAIRTLNTLQTNANYLEQVKRERGDPQVQLEAMKGFLERSGLKVEDLDQLNIIHVTGTKGKGSTCAFTERILRNYGLKTGFYSSPHLVQVRERIRINGQPISKELFSKYFWQVYNRLEETKDPGHASMPAYFRFLTIMAFHVFLQEKVDLAVVEVGIGGAYDCTNIIRKPIVCGVSSLGIDHTSILGDTIEKIAWQKGGIFKPGVPAFTVPQPERPLEVLRERARESPCPLYLCPDLEAFEEDDKALQLGLAGEHQRSNATLALQLSRAWLQQQGYQGTGELKDLQPGAELLGKRPVPLAPAFRPSGSMVQGLQDTEWLGRTQVLQHGAVTWFIDGAHTTSSVQACVRWFRQAALNEEKPVDGSELRVLLFNATGDRDMGALLKLLVPCRFDYAVFCPNFTEVSAVGNAARCSPLCRPTELQRHPGEHADPLPGEPEEVEPADGGEGGAGPLAVSPHAGGGGGWPAEARPLARPPALRALFRAPSQLQLAGVPLHLSRPAVDHPGQGPALPGTRHQGAPPAPRGGHRRCLAQGSGCHPRAGHGKPAPGGRCLEAARPIALAVAGACGRGLRAALCCLLEYSQAPFTRCSLSLLPPEWDASGSGAGHCTCCWGSPAETFAAAGSTPRTGIGTASVHAPAPGSRAEPLTAAPAAPWHQDSPVQPQATPPPPPAGSFRQCRDLVTALMLVV
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2719864..2720702,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2733399..2733515))
location: region:2719864-2733515:-1
so has part: feature:2733399-2733515:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2719864-2720702:-1:exon

XP_042710123.1
type: Protein
SIO_000068: ncbiprotein

position:2733515:-1
position: 2733515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2733399-2733515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2719864-2720702:-1:exon

FPGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: FPGS
product: folylpolyglutamate synthase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_024106136.2
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2720106..2720680,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2735478..2735553,2736402..2736476))
location: region:2720106-2736476:-1
so has part: feature:2736402-2736476:-1:exon
so has part: feature:2735478-2735553:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2720106-2720680:-1:exon

position:2720106:-1
position: 2720106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736476:-1
position: 2736476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736402-2736476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735478-2735553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2720106-2720680:-1:exon

position:2720680:-1
position: 2720680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FPGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: FPGS
product: folylpolyglutamate synthase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_005293448.4
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2720106..2720680,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2733399..2733593))
location: region:2720106-2733593:-1
so has part: feature:2733399-2733593:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2720106-2720680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2733399-2733593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2720106-2720680:-1:exon

FPGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folylpolyglutamate synthase, mitochondrial isoform X5
translation: MWWSCPYTRRIEMDAIRTLNTLQTNANYLEQVKRERGDPQVQLEAMKGFLERSGLKVEDLDQLNIIHVTGTKGKGSTCAFTERILRNYGLKTGFYSSPHLVQVRERIRINGQPISKELFSKYFWQVYNRLEETKDPGHASMPAYFRFLTIMAFHVFLQEKVDLAVVEVGIGGAYDCTNIIRKPIVCGVSSLGIDHTSILGDTIEKIAWQKGGIFKPGVPAFTVPQPERPLEVLRERARESPCPLYLCPDLEAFEEDDKALQLGLAGEHQRSNATLALQLSRAWLQQQGYQGTGELKDLQPGAELLGKRPVPLAPAFRPSGSMVQGLQDTEWLGRTQVLQHGAVTWFIDGAHTTSSVQACVRWFRQAALNEEKPVDGSELRVLLFNATGDRDMGALLKLLVPCRFDYAVFCPNFTEVSAVGNADQQNFNVTLENMLTRCLENQKKWNRLMEEKVGQDLWLSPPMQVEGVGGLLKPDPLRGPLLFVPSSERPLNSNSLVFPCISHALQWITQGRDPHFQAPATKGLHLHPVAGTGAVLLKEAAAIRVLVTGSLHLVGGVLKLLDQSLSQ
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2720244..2720680,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2735478..2735516))
location: region:2720244-2735516:-1
so has part: feature:2735478-2735516:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2720244-2720680:-1:exon

XP_023961904.1
type: Protein
SIO_000068: ncbiprotein

position:2720244:-1
position: 2720244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735478-2735516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2720244-2720680:-1:exon

FPGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folylpolyglutamate synthase, mitochondrial isoform X4
translation: MGFRGLRGLHSALRLVAEAAGGQRCFSTRPARVPRMEYQDAIRTLNTLQTNANYLEQVKRERGDPQVQLEAMKGFLERSGLKVEDLDQLNIIHVTGTKGKGSTCAFTERILRNYGLKTGFYSSPHLVQVRERIRINGQPISKELFSKYFWQVYNRLEETKDPGHASMPAYFRFLTIMAFHVFLQEKVDLAVVEVGIGGAYDCTNIIRKPIVCGVSSLGIDHTSILGDTIEKIAWQKGGIFKPGVPAFTVPQPERPLEVLRERARESPCPLYLCPDLEAFEEDDKALQLGLAGEHQRSNATLALQLSRAWLQQQGYQGTGELKDLQPGAELLGKRPVPLAPAFRPSGSMVQGLQDTEWLGRTQVLQHGAVTWFIDGAHTTSSVQACVRWFRQAALNEEKPVDGSELRVLLFNATGDRDMGALLKLLVPCRFDYAVFCPNFTEVSAVGNADQQNFNVTLENMLTRCLENQKKWNRLMEEKVGQDLWLSPPMQVEGVGGLLKPDPLRGPLLFVPSSERPLNSNSLVFPCISHALQWITQGRDPHFQAPATKGLHLHPVAGTGAVLLKEAAAIRVLVTGSLHLVGGVLKLLDQSLSQ
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(2720244..2720680,2721287..2721353,2722316..2722391,2722873..2723023,2724072..2724173,2725764..2725911,2726440..2726517,2726851..2726953,2727393..2727454,2727570..2727647,2728230..2728344,2728458..2728522,2728815..2728868,2729099..2729227,2733399..2733515))
location: region:2720244-2733515:-1
so has part: feature:2733399-2733515:-1:exon
so has part: feature:2729099-2729227:-1:exon
so has part: feature:2728815-2728868:-1:exon
so has part: feature:2728458-2728522:-1:exon
so has part: feature:2728230-2728344:-1:exon
so has part: feature:2727570-2727647:-1:exon
so has part: feature:2727393-2727454:-1:exon
so has part: feature:2726851-2726953:-1:exon
so has part: feature:2726440-2726517:-1:exon
so has part: feature:2725764-2725911:-1:exon
so has part: feature:2724072-2724173:-1:exon
so has part: feature:2722873-2723023:-1:exon
so has part: feature:2722316-2722391:-1:exon
so has part: feature:2721287-2721353:-1:exon
so has part: feature:2720244-2720680:-1:exon

XP_005293505.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2733399-2733515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2729099-2729227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728815-2728868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728458-2728522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2728230-2728344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2727570-2727647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2727393-2727454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726851-2726953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726440-2726517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2725764-2725911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724072-2724173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722873-2723023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722316-2722391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2721287-2721353:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2720244-2720680:-1:exon

CDK9
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: CDK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2737145..2760565)
location: region:2737145-2760565:-1
so has part: feature:2737145-2760565:-1:exon
subclass of: SO_0000010

101938190
type: Gene
SIO_000068: ncbigene

position:2737145:-1
position: 2737145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760565:-1
position: 2760565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2737145-2760565:-1:exon

CDK9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK9
product: cyclin dependent kinase 9, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854192.1
SIO_010081: CDK9
subclass of: SO_0000673
so part of: CDK9
location: complement(join(2737145..2738348,2741075..2741223,2741386..2741557,2742363..2742529,2744410..2744503,2745319..2745400,2746589..2746713,2759743..2759746,2760560..2760565))
location: region:2737145-2760565:-1
so has part: feature:2760560-2760565:-1:exon
so has part: feature:2759743-2759746:-1:exon
so has part: feature:2746589-2746713:-1:exon
so has part: feature:2745319-2745400:-1:exon
so has part: feature:2744410-2744503:-1:exon
so has part: feature:2742363-2742529:-1:exon
so has part: feature:2741386-2741557:-1:exon
so has part: feature:2741075-2741223:-1:exon
so has part: feature:2737145-2738348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2760560-2760565:-1:exon

position:2760560:-1
position: 2760560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2759743-2759746:-1:exon

position:2759743:-1
position: 2759743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759746:-1
position: 2759746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2746589-2746713:-1:exon

position:2746589:-1
position: 2746589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746713:-1
position: 2746713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2745319-2745400:-1:exon

position:2745319:-1
position: 2745319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745400:-1
position: 2745400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2744410-2744503:-1:exon

position:2744410:-1
position: 2744410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2744503:-1
position: 2744503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2742363-2742529:-1:exon

position:2742363:-1
position: 2742363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2742529:-1
position: 2742529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2741386-2741557:-1:exon

position:2741386:-1
position: 2741386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741557:-1
position: 2741557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2741075-2741223:-1:exon

position:2741075:-1
position: 2741075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741223:-1
position: 2741223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2737145-2738348:-1:exon

position:2738348:-1
position: 2738348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CDK9
product: cyclin dependent kinase 9, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293447.3
SIO_010081: CDK9
subclass of: SO_0000673
so part of: CDK9
location: complement(join(2737145..2738348,2741075..2741223,2741386..2741557,2742363..2742529,2744413..2744503,2745319..2745400,2746589..2746755))
location: region:2737145-2746755:-1
so has part: feature:2746589-2746755:-1:exon
so has part: feature:2745319-2745400:-1:exon
so has part: feature:2744413-2744503:-1:exon
so has part: feature:2742363-2742529:-1:exon
so has part: feature:2741386-2741557:-1:exon
so has part: feature:2741075-2741223:-1:exon
so has part: feature:2737145-2738348:-1:exon

position:2746755:-1
position: 2746755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746589-2746755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2745319-2745400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2744413-2744503:-1:exon

position:2744413:-1
position: 2744413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2742363-2742529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2741386-2741557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741075-2741223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2737145-2738348:-1:exon

CDK9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 9 isoform X2
translation: MAKQYDTVECPFCDEVSKYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNAHVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPNVDKYELYQKLDLPKGQKRKVKDRLKAYVKDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNQSMFEYLAPPRRRGGHMPQQPANQGRNPAATNQTEFDRVF
SIO_010081: CDK9
subclass of: SO_0000673
so part of: CDK9
location: complement(join(2737983..2738348,2741075..2741223,2741386..2741557,2742363..2742529,2744413..2744503,2745319..2745400,2746589..2746680))
location: region:2737983-2746680:-1
so has part: feature:2746589-2746680:-1:exon
so has part: feature:2745319-2745400:-1:exon
so has part: feature:2744413-2744503:-1:exon
so has part: feature:2742363-2742529:-1:exon
so has part: feature:2741386-2741557:-1:exon
so has part: feature:2741075-2741223:-1:exon
so has part: feature:2737983-2738348:-1:exon

XP_005293504.1
type: Protein
SIO_000068: ncbiprotein

position:2737983:-1
position: 2737983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746680:-1
position: 2746680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746589-2746680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2745319-2745400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2744413-2744503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2742363-2742529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2741386-2741557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741075-2741223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2737983-2738348:-1:exon

CDK9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CDK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 9 isoform X1
translation: MAKQYDTVECPFCDEVSKYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKGTSPYNRCKGSIYLVFDFCEHDLAGLLSNAHVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPNVDKYELYQKLDLPKGQKRKVKDRLKAYVKDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNQSMFEYLAPPRRRGGHMPQQPANQGRNPAATNQTEFDRVF
SIO_010081: CDK9
subclass of: SO_0000673
so part of: CDK9
location: complement(join(2737983..2738348,2741075..2741223,2741386..2741557,2742363..2742529,2744410..2744503,2745319..2745400,2746589..2746680))
location: region:2737983-2746680:-1
so has part: feature:2746589-2746680:-1:exon
so has part: feature:2745319-2745400:-1:exon
so has part: feature:2744410-2744503:-1:exon
so has part: feature:2742363-2742529:-1:exon
so has part: feature:2741386-2741557:-1:exon
so has part: feature:2741075-2741223:-1:exon
so has part: feature:2737983-2738348:-1:exon

XP_042710126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2746589-2746680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2745319-2745400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2744410-2744503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2742363-2742529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2741386-2741557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741075-2741223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2737983-2738348:-1:exon

SH2D3C
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2758033..2814490
location: region:2758033-2814490:1
so has part: feature:2758033-2814490:1:exon
subclass of: SO_0000010

101937918
type: Gene
SIO_000068: ncbigene

position:2758033:1
position: 2758033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814490:1
position: 2814490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2758033-2814490:1:exon

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854185.1
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2758033..2758115,2762885..2763548,2776560..2776599,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2814490)
location: region:2758033-2814490:1
so has part: feature:2758033-2758115:1:exon
so has part: feature:2762885-2763548:1:exon
so has part: feature:2776560-2776599:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2814490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2758033-2758115:1:exon

position:2758115:1
position: 2758115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2762885-2763548:1:exon

position:2762885:1
position: 2762885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763548:1
position: 2763548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2776560-2776599:1:exon

position:2776560:1
position: 2776560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776599:1
position: 2776599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2799562-2799690:1:exon

position:2799562:1
position: 2799562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2799690:1
position: 2799690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2803092-2803540:1:exon

position:2803092:1
position: 2803092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2803540:1
position: 2803540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2804711-2804835:1:exon

position:2804711:1
position: 2804711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2804835:1
position: 2804835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2806350-2806915:1:exon

position:2806350:1
position: 2806350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2806915:1
position: 2806915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2808169-2808284:1:exon

position:2808169:1
position: 2808169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2808284:1
position: 2808284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2808966-2809137:1:exon

position:2808966:1
position: 2808966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2809137:1
position: 2809137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2810113-2810224:1:exon

position:2810113:1
position: 2810113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2810224:1
position: 2810224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2811307-2811513:1:exon

position:2811307:1
position: 2811307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811513:1
position: 2811513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2813294-2814490:1:exon

position:2813294:1
position: 2813294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_042854186.1
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2758033..2758115,2762885..2763548,2776560..2776599,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810298,2811307..2811435)
location: region:2758033-2811435:1
so has part: feature:2758033-2758115:1:exon
so has part: feature:2762885-2763548:1:exon
so has part: feature:2776560-2776599:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810298:1:exon
so has part: feature:2811307-2811435:1:exon

position:2811435:1
position: 2811435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2758033-2758115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2762885-2763548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2776560-2776599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2810113-2810298:1:exon

position:2810298:1
position: 2810298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2811307-2811435:1:exon

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X1
translation: MAEGQKKGAFKKFKFFKFKGFGSLSNIPRTFTLRRVSAPASPTEILREGTLHPNSFLEDTLESTQDDLNTMPKSPSPYARSCDMYSHMGTMPRTTPSGAGKRTKSSESSHTRGTTGGRAPGTSPPAIPESAAPADPAPAADASSGTLPSKNGPSLGESITTEPRVGSDASGNDPPPGQAPGGVGEGHAASPAQEPSQAPRTGCTKAELLQEPVLLEGKGAKEELPPASWESPQRSPADGPESCSEYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHVWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVMVKSSDGRTHIQYLFEQESFDNVPALVRFYVGNRKAVSEQSGAIVYCPINRTFPLRYLEASYGLANGKHSGPHSPASQKGGHIKRRSITMTDGLTADKITRGEGCPTSVSLPHHRDVIRNCAVSVDQIQDLHSPMSPISESPLSPAYSTVTRLKPQGGQAGGITPASPVIRRSSEPQLCPGNNPLTDLADSTHSTPCHGYSTASPSPSVNSYSDPDTGHYCQLHPTSPVGQERPTHDTKPLPTKSYVERLKVEGGQRVTAENGSSEAGQRMKREQDIVGFVSPTVEMGSSFNPVAFQSLLIPLENKPLEMAVLKKVKELLAEVDAKALARHITKVDCLVARILGVTKEMQRHMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTLGNMFSFAAVMNALEMTQISRLEHTWMALRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLTNTTFPHIVPLITLLERDAALLDSPEPWENTDNGVEVVMAHLEAARMVAHHGGLYHTNAEVKLQGFQGKAELLEIFSTEFQMRLLWGSRGAESSQRERYEKFDKVLTALSHKLEPSVRFSEL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2758076..2758115,2762885..2763548,2776560..2776599,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2813469)
location: region:2758076-2813469:1
so has part: feature:2758076-2758115:1:exon
so has part: feature:2762885-2763548:1:exon
so has part: feature:2776560-2776599:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2813469:1:exon

XP_042710119.1
type: Protein
SIO_000068: ncbiprotein

position:2758076:1
position: 2758076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2813469:1
position: 2813469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2758076-2758115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2762885-2763548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2776560-2776599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2810113-2810224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2811307-2811513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2813294-2813469:1:exon

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X2
translation: MAEGQKKGAFKKFKFFKFKGFGSLSNIPRTFTLRRVSAPASPTEILREGTLHPNSFLEDTLESTQDDLNTMPKSPSPYARSCDMYSHMGTMPRTTPSGAGKRTKSSESSHTRGTTGGRAPGTSPPAIPESAAPADPAPAADASSGTLPSKNGPSLGESITTEPRVGSDASGNDPPPGQAPGGVGEGHAASPAQEPSQAPRTGCTKAELLQEPVLLEGKGAKEELPPASWESPQRSPADGPESCSEYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHVWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVMVKSSDGRTHIQYLFEQESFDNVPALVRFYVGNRKAVSEQSGAIVYCPINRTFPLRYLEASYGLANGKHSGPHSPASQKGGHIKRRSITMTDGLTADKITRGEGCPTSVSLPHHRDVIRNCAVSVDQIQDLHSPMSPISESPLSPAYSTVTRLKPQGGQAGGITPASPVIRRSSEPQLCPGNNPLTDLADSTHSTPCHGYSTASPSPSVNSYSDPDTGHYCQLHPTSPVGQERPTHDTKPLPTKSYVERLKVEGGQRVTAENGSSEAGQRMKREQDIVGFVSPTVEMGSSFNPVAFQSLLIPLENKPLEMAVLKKVKELLAEVDAKALARHITKVDCLVARILGVTKEMQRHMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTLGNMFSFAAVMNALEMTQISRLEHTWMALRQRHTEGAILYEKKLKPFLKSLNEGKGNGEEESFAWHFSFPCALL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2758076..2758115,2762885..2763548,2776560..2776599,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810283)
location: region:2758076-2810283:1
so has part: feature:2758076-2758115:1:exon
so has part: feature:2762885-2763548:1:exon
so has part: feature:2776560-2776599:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810283:1:exon

XP_042710120.1
type: Protein
SIO_000068: ncbiprotein

position:2810283:1
position: 2810283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2758076-2758115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2762885-2763548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2776560-2776599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2810113-2810283:1:exon

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854187.1
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2766623..2766774,2776560..2776599,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2814490)
location: region:2766623-2814490:1
so has part: feature:2766623-2766774:1:exon
so has part: feature:2776560-2776599:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2814490:1:exon

position:2766623:1
position: 2766623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766623-2766774:1:exon

position:2766774:1
position: 2766774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2776560-2776599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2810113-2810224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2811307-2811513:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2813294-2814490:1:exon

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X3
translation: MTEVGRRPHGPGHGSPADGPESCSEYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHVWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVMVKSSDGRTHIQYLFEQESFDNVPALVRFYVGNRKAVSEQSGAIVYCPINRTFPLRYLEASYGLANGKHSGPHSPASQKGGHIKRRSITMTDGLTADKITRGEGCPTSVSLPHHRDVIRNCAVSVDQIQDLHSPMSPISESPLSPAYSTVTRLKPQGGQAGGITPASPVIRRSSEPQLCPGNNPLTDLADSTHSTPCHGYSTASPSPSVNSYSDPDTGHYCQLHPTSPVGQERPTHDTKPLPTKSYVERLKVEGGQRVTAENGSSEAGQRMKREQDIVGFVSPTVEMGSSFNPVAFQSLLIPLENKPLEMAVLKKVKELLAEVDAKALARHITKVDCLVARILGVTKEMQRHMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTLGNMFSFAAVMNALEMTQISRLEHTWMALRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLTNTTFPHIVPLITLLERDAALLDSPEPWENTDNGVEVVMAHLEAARMVAHHGGLYHTNAEVKLQGFQGKAELLEIFSTEFQMRLLWGSRGAESSQRERYEKFDKVLTALSHKLEPSVRFSEL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2766731..2766774,2776560..2776599,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2813469)
location: region:2766731-2813469:1
so has part: feature:2766731-2766774:1:exon
so has part: feature:2776560-2776599:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2813469:1:exon

XP_042710121.1
type: Protein
SIO_000068: ncbiprotein

position:2766731:1
position: 2766731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766731-2766774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2776560-2776599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2810113-2810224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2811307-2811513:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2813294-2813469:1:exon

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293446.4
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2786050..2794997,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2814490)
location: region:2786050-2814490:1
so has part: feature:2786050-2794997:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2814490:1:exon

position:2786050:1
position: 2786050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2786050-2794997:1:exon

position:2794997:1
position: 2794997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810113-2810224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2811307-2811513:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2813294-2814490:1:exon

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X5
translation: MQVQFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHVWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVMVKSSDGRTHIQYLFEQESFDNVPALVRFYVGNRKAVSEQSGAIVYCPINRTFPLRYLEASYGLANGKHSGPHSPASQKGGHIKRRSITMTDGLTADKITRGEGCPTSVSLPHHRDVIRNCAVSVDQIQDLHSPMSPISESPLSPAYSTVTRLKPQGGQAGGITPASPVIRRSSEPQLCPGNNPLTDLADSTHSTPCHGYSTASPSPSVNSYSDPDTGHYCQLHPTSPVGQERPTHDTKPLPTKSYVERLKVEGGQRVTAENGSSEAGQRMKREQDIVGFVSPTVEMGSSFNPVAFQSLLIPLENKPLEMAVLKKVKELLAEVDAKALARHITKVDCLVARILGVTKEMQRHMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTLGNMFSFAAVMNALEMTQISRLEHTWMALRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLTNTTFPHIVPLITLLERDAALLDSPEPWENTDNGVEVVMAHLEAARMVAHHGGLYHTNAEVKLQGFQGKAELLEIFSTEFQMRLLWGSRGAESSQRERYEKFDKVLTALSHKLEPSVRFSEL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2794986..2794997,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2813469)
location: region:2794986-2813469:1
so has part: feature:2794986-2794997:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2813469:1:exon

XP_005293503.1
type: Protein
SIO_000068: ncbiprotein

position:2794986:1
position: 2794986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2794986-2794997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810113-2810224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2811307-2811513:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2813294-2813469:1:exon

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854188.1
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2795194..2797186,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2814490)
location: region:2795194-2814490:1
so has part: feature:2795194-2797186:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2814490:1:exon

position:2795194:1
position: 2795194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2795194-2797186:1:exon

position:2797186:1
position: 2797186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810113-2810224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2811307-2811513:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2813294-2814490:1:exon

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X4
translation: MLPTHCPPFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHVWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVMVKSSDGRTHIQYLFEQESFDNVPALVRFYVGNRKAVSEQSGAIVYCPINRTFPLRYLEASYGLANGKHSGPHSPASQKGGHIKRRSITMTDGLTADKITRGEGCPTSVSLPHHRDVIRNCAVSVDQIQDLHSPMSPISESPLSPAYSTVTRLKPQGGQAGGITPASPVIRRSSEPQLCPGNNPLTDLADSTHSTPCHGYSTASPSPSVNSYSDPDTGHYCQLHPTSPVGQERPTHDTKPLPTKSYVERLKVEGGQRVTAENGSSEAGQRMKREQDIVGFVSPTVEMGSSFNPVAFQSLLIPLENKPLEMAVLKKVKELLAEVDAKALARHITKVDCLVARILGVTKEMQRHMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTLGNMFSFAAVMNALEMTQISRLEHTWMALRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLTNTTFPHIVPLITLLERDAALLDSPEPWENTDNGVEVVMAHLEAARMVAHHGGLYHTNAEVKLQGFQGKAELLEIFSTEFQMRLLWGSRGAESSQRERYEKFDKVLTALSHKLEPSVRFSEL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(2797163..2797186,2799562..2799690,2803092..2803540,2804711..2804835,2806350..2806915,2808169..2808284,2808966..2809137,2810113..2810224,2811307..2811513,2813294..2813469)
location: region:2797163-2813469:1
so has part: feature:2797163-2797186:1:exon
so has part: feature:2799562-2799690:1:exon
so has part: feature:2803092-2803540:1:exon
so has part: feature:2804711-2804835:1:exon
so has part: feature:2806350-2806915:1:exon
so has part: feature:2808169-2808284:1:exon
so has part: feature:2808966-2809137:1:exon
so has part: feature:2810113-2810224:1:exon
so has part: feature:2811307-2811513:1:exon
so has part: feature:2813294-2813469:1:exon

XP_042710122.1
type: Protein
SIO_000068: ncbiprotein

position:2797163:1
position: 2797163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2797163-2797186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2799562-2799690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2803092-2803540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804711-2804835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2806350-2806915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2808169-2808284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2808966-2809137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810113-2810224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2811307-2811513:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2813294-2813469:1:exon

TOR2A
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: TOR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2815235..2825692
location: region:2815235-2825692:1
so has part: feature:2815235-2825692:1:exon
subclass of: SO_0000010

101948206
type: Gene
SIO_000068: ncbigene

position:2815235:1
position: 2815235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2825692:1
position: 2825692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2815235-2825692:1:exon

TOR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: TOR2A
product: torsin family 2 member A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106148.1
SIO_010081: TOR2A
subclass of: SO_0000673
so part of: TOR2A
location: join(2815235..2815331,2820073..2820338,2821359..2821534,2821873..2822000,2823841..2825692)
location: region:2815235-2825692:1
so has part: feature:2815235-2815331:1:exon
so has part: feature:2820073-2820338:1:exon
so has part: feature:2821359-2821534:1:exon
so has part: feature:2821873-2822000:1:exon
so has part: feature:2823841-2825692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2815235-2815331:1:exon

position:2815331:1
position: 2815331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2820073-2820338:1:exon

position:2820073:1
position: 2820073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2820338:1
position: 2820338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2821359-2821534:1:exon

position:2821359:1
position: 2821359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2821534:1
position: 2821534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2821873-2822000:1:exon

position:2821873:1
position: 2821873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822000:1
position: 2822000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2823841-2825692:1:exon

position:2823841:1
position: 2823841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TOR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: TOR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prosalusin
translation: MLYTSGAVLLYFYKDSLKFHPINSALVSSLLSGLECDLALNLVGQHLVRQLVVKGVREFLQNHDPVKPLVMSFHGWTGTGKTYVSSMLVRYLFQDGVRSPYVHQFSPIVHFPHAEQIEQYKENLKSWIQGNLTNCGRSVFLFDEMDKMHPGLIDVIIPFLGPSWVVYGTNYRKAIFIFISNGGGEQINRMVLDLWYARKDREEISLQDLESAVSEAVFENPNNGFWKSGIIEEHLIDLLVPFLPLKQHHVKQCVVNELTQQGLTVHQDIIQAVADSIPYFPEEERVFSSTGCKTVASRVTFFS
SIO_010081: TOR2A
subclass of: SO_0000673
so part of: TOR2A
location: join(2815235..2815331,2820073..2820338,2821359..2821534,2821873..2822000,2823841..2824085)
location: region:2815235-2824085:1
so has part: feature:2815235-2815331:1:exon
so has part: feature:2820073-2820338:1:exon
so has part: feature:2821359-2821534:1:exon
so has part: feature:2821873-2822000:1:exon
so has part: feature:2823841-2824085:1:exon

XP_023961916.1
type: Protein
SIO_000068: ncbiprotein

position:2824085:1
position: 2824085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2815235-2815331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2820073-2820338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2821359-2821534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2821873-2822000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2823841-2824085:1:exon

LOC112059679
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: LOC112059679
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2819558..2819651
location: region:2819558-2819651:1
so has part: feature:2819558-2819651:1:exon

112059679
type: Gene
SIO_000068: ncbigene

position:2819558:1
position: 2819558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2819651:1
position: 2819651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2819558-2819651:1:exon

LOC112059679
type: Exon
subclass of: SO_0000147
RO_0002162: 8478
gene: LOC112059679
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC112059679
subclass of: SO_0000673
so part of: LOC112059679
location: 2819558..2819651
location: region:2819558-2819651:1
so has part: feature:2819558-2819651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2819558-2819651:1:exon

TTC16
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: TTC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2826816..2837771)
location: region:2826816-2837771:-1
so has part: feature:2826816-2837771:-1:exon
subclass of: SO_0000010

101947940
type: Gene
SIO_000068: ncbigene

position:2826816:-1
position: 2826816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837771:-1
position: 2837771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2826816-2837771:-1:exon

TTC16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: TTC16
product: tetratricopeptide repeat domain 16, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106131.2
SIO_010081: TTC16
subclass of: SO_0000673
so part of: TTC16
location: complement(join(2826816..2827146,2827446..2827588,2828453..2828618,2828741..2828882,2829953..2830194,2830383..2830597,2831931..2832060,2832148..2832248,2834205..2834348,2834667..2834757,2835904..2836082,2837448..2837771))
location: region:2826816-2837771:-1
so has part: feature:2837448-2837771:-1:exon
so has part: feature:2835904-2836082:-1:exon
so has part: feature:2834667-2834757:-1:exon
so has part: feature:2834205-2834348:-1:exon
so has part: feature:2832148-2832248:-1:exon
so has part: feature:2831931-2832060:-1:exon
so has part: feature:2830383-2830597:-1:exon
so has part: feature:2829953-2830194:-1:exon
so has part: feature:2828741-2828882:-1:exon
so has part: feature:2828453-2828618:-1:exon
so has part: feature:2827446-2827588:-1:exon
so has part: feature:2826816-2827146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2837448-2837771:-1:exon

position:2837448:-1
position: 2837448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2835904-2836082:-1:exon

position:2835904:-1
position: 2835904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2836082:-1
position: 2836082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2834667-2834757:-1:exon

position:2834667:-1
position: 2834667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2834757:-1
position: 2834757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2834205-2834348:-1:exon

position:2834205:-1
position: 2834205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2834348:-1
position: 2834348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2832148-2832248:-1:exon

position:2832148:-1
position: 2832148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2832248:-1
position: 2832248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2831931-2832060:-1:exon

position:2831931:-1
position: 2831931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2832060:-1
position: 2832060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2830383-2830597:-1:exon

position:2830383:-1
position: 2830383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2830597:-1
position: 2830597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2829953-2830194:-1:exon

position:2829953:-1
position: 2829953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2830194:-1
position: 2830194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2828741-2828882:-1:exon

position:2828741:-1
position: 2828741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2828882:-1
position: 2828882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2828453-2828618:-1:exon

position:2828453:-1
position: 2828453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2828618:-1
position: 2828618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2827446-2827588:-1:exon

position:2827446:-1
position: 2827446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2827588:-1
position: 2827588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2826816-2827146:-1:exon

position:2827146:-1
position: 2827146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: TTC16
product: tetratricopeptide repeat domain 16, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854195.1
SIO_010081: TTC16
subclass of: SO_0000673
so part of: TTC16
location: complement(join(2826816..2827146,2827446..2827588,2828453..2828618,2828741..2828882,2829953..2830194,2830383..2830597,2831931..2832060,2832148..2832248,2832815..2832958,2833276..2833360))
location: region:2826816-2833360:-1
so has part: feature:2833276-2833360:-1:exon
so has part: feature:2832815-2832958:-1:exon
so has part: feature:2832148-2832248:-1:exon
so has part: feature:2831931-2832060:-1:exon
so has part: feature:2830383-2830597:-1:exon
so has part: feature:2829953-2830194:-1:exon
so has part: feature:2828741-2828882:-1:exon
so has part: feature:2828453-2828618:-1:exon
so has part: feature:2827446-2827588:-1:exon
so has part: feature:2826816-2827146:-1:exon

position:2833360:-1
position: 2833360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2833276-2833360:-1:exon

position:2833276:-1
position: 2833276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2832815-2832958:-1:exon

position:2832815:-1
position: 2832815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2832958:-1
position: 2832958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2832148-2832248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2831931-2832060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2830383-2830597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2829953-2830194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2828741-2828882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2828453-2828618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2827446-2827588:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2826816-2827146:-1:exon

TTC16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: TTC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 16 isoform X2
translation: MRAQQGSRLGHGTFSLWAHPLSPACLATRDTTTGMAAAAPQEEPGQSKVRLEMKTETKGLFPTAVSKENLRERSLRQIFGSSQTLRDLKDPSGVKSPTAIVQNRIQEHCQRGKEFFSQGEWEKVVICYSKAINLNPQQVEFYVQKAEAFLQLCDFQSAVLNLRKAYSLSSAKEEYVERMAFIIYLQGQCLFDQEVYWDALESFTRASELQPDNSLYRRRSIACLAALNRYHDCFRLVNEELDQDSKNPDLYILRAKLHEHFCRATLCYQDVQEAIALEPRHEEAQILMQRLLKRAQQAKNQAMNKALKGNLKDALLKITFAIENSPFDAGYFIFRGTLHRRVKDFNSAIDDYLKATELCEEEGAVAMEAQRQLLLTYNDFAVHCYTQGFFEEAVLLLNKALKGEKNEKGLYVNRGDCLFRLGELTFALADYQQALELSPMDFSLRRRVGMLLDELGLQEHKQRKYQRAVYCFSGAIESNPRLPHYYLHRAKSRLFLQDEMSAKEDVIIALLLDPENDAVLPVMTSLFPGQPIQDIISSKIAEVAKTILERKLQACPYSNSRAKLKWPPGALEDEPKEPGTQSEDPERALQDSESVIRPCATEHELYKQIASSRRTVSKVSEPVLEEKR
SIO_010081: TTC16
subclass of: SO_0000673
so part of: TTC16
location: complement(join(2826957..2827146,2827446..2827588,2828453..2828618,2828741..2828882,2829953..2830194,2830383..2830597,2831931..2832060,2832148..2832248,2834205..2834348,2834667..2834757,2835904..2836082,2837448..2837591))
location: region:2826957-2837591:-1
so has part: feature:2837448-2837591:-1:exon
so has part: feature:2835904-2836082:-1:exon
so has part: feature:2834667-2834757:-1:exon
so has part: feature:2834205-2834348:-1:exon
so has part: feature:2832148-2832248:-1:exon
so has part: feature:2831931-2832060:-1:exon
so has part: feature:2830383-2830597:-1:exon
so has part: feature:2829953-2830194:-1:exon
so has part: feature:2828741-2828882:-1:exon
so has part: feature:2828453-2828618:-1:exon
so has part: feature:2827446-2827588:-1:exon
so has part: feature:2826957-2827146:-1:exon

XP_023961899.2
type: Protein
SIO_000068: ncbiprotein

position:2826957:-1
position: 2826957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837591:-1
position: 2837591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2837448-2837591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2835904-2836082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2834667-2834757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2834205-2834348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2832148-2832248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2831931-2832060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2830383-2830597:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2829953-2830194:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2828741-2828882:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2828453-2828618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2827446-2827588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2826957-2827146:-1:exon

TTC16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: TTC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 16 isoform X1
translation: MAFIIYLQGQCLFDQEVYWDALESFTRASELQPDNSLYRRRSIACLAALNRYHDCFRLVNEELDQDSKNPDLYILRAKLHEHFCRATLCYQDVQEAIALEPRHEEAQILMQRLLKRAQQAKNQAMNKALKGNLKDALLKITFAIENSPFDAGYFIFRGTLHRRVKDFNSAIDDYLKATELCEEEGAVAMEAQRQLLLTYNDFAVHCYTQGFFEEAVLLLNKALKGEKNEKGLYVNRGDCLFRLGELTFALADYQQALELSPMDFSLRRRVGMLLDELGLQEHKQRKYQRAVYCFSGAIESNPRLPHYYLHRAKSRLFLQDEMSAKEDVIIALLLDPENDAVLPVMTSLFPGQPIQDIISSKIAEVAKTILERKLQACPYSNSRAKLKWPPGALEDEPKEPGTQSEDPERALQDSESVIRPCATEHELYKQIASSRRTVSKVSEPVLEEKR
SIO_010081: TTC16
subclass of: SO_0000673
so part of: TTC16
location: complement(join(2826957..2827146,2827446..2827588,2828453..2828618,2828741..2828882,2829953..2830194,2830383..2830597,2831931..2832060,2832148..2832248,2832815..2832838))
location: region:2826957-2832838:-1
so has part: feature:2832815-2832838:-1:exon
so has part: feature:2832148-2832248:-1:exon
so has part: feature:2831931-2832060:-1:exon
so has part: feature:2830383-2830597:-1:exon
so has part: feature:2829953-2830194:-1:exon
so has part: feature:2828741-2828882:-1:exon
so has part: feature:2828453-2828618:-1:exon
so has part: feature:2827446-2827588:-1:exon
so has part: feature:2826957-2827146:-1:exon

XP_042710129.1
type: Protein
SIO_000068: ncbiprotein

position:2832838:-1
position: 2832838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2832815-2832838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2832148-2832248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2831931-2832060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2830383-2830597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2829953-2830194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2828741-2828882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2828453-2828618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2827446-2827588:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2826957-2827146:-1:exon

PTRH1
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: PTRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2839878..2847835
location: region:2839878-2847835:1
so has part: feature:2839878-2847835:1:exon
subclass of: SO_0000010

101937189
type: Gene
SIO_000068: ncbigene

position:2839878:1
position: 2839878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847835:1
position: 2847835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2839878-2847835:1:exon

PTRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: PTRH1
product: peptidyl-tRNA hydrolase 1 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106134.2
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(2839878..2840082,2843473..2843692,2844663..2844762,2846257..2846302,2846994..2847835)
location: region:2839878-2847835:1
so has part: feature:2839878-2840082:1:exon
so has part: feature:2843473-2843692:1:exon
so has part: feature:2844663-2844762:1:exon
so has part: feature:2846257-2846302:1:exon
so has part: feature:2846994-2847835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2839878-2840082:1:exon

position:2840082:1
position: 2840082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2843473-2843692:1:exon

position:2843473:1
position: 2843473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843692:1
position: 2843692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2844663-2844762:1:exon

position:2844663:1
position: 2844663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844762:1
position: 2844762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2846257-2846302:1:exon

position:2846257:1
position: 2846257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846302:1
position: 2846302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2846994-2847835:1:exon

position:2846994:1
position: 2846994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: PTRH1
product: peptidyl-tRNA hydrolase 1 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106132.2
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(2839878..2840082,2843473..2843692,2844663..2844762,2846994..2847835)
location: region:2839878-2847835:1
so has part: feature:2839878-2840082:1:exon
so has part: feature:2843473-2843692:1:exon
so has part: feature:2844663-2844762:1:exon
so has part: feature:2846994-2847835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2839878-2840082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2843473-2843692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2844663-2844762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846994-2847835:1:exon

PTRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: PTRH1
product: peptidyl-tRNA hydrolase 1 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854196.1
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(2839878..2840076,2843473..2843692,2844663..2844762,2846994..2847835)
location: region:2839878-2847835:1
so has part: feature:2839878-2840076:1:exon
so has part: feature:2843473-2843692:1:exon
so has part: feature:2844663-2844762:1:exon
so has part: feature:2846994-2847835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2839878-2840076:1:exon

position:2840076:1
position: 2840076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2843473-2843692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2844663-2844762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846994-2847835:1:exon

PTRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: PTRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable peptidyl-tRNA hydrolase isoform X1
translation: MLRPLPKRLGRLLSRTMSHREADPRAAGKRVLVAGLGNYGLRGTRHNVGMAVLNHLAQKLNVAAQWKVDRRCCADVTITNVEEAELVLMKPRRLMNINGLSVASAAETYDLGVEDIYLVHDDLDKPLGKMAIKLGGSASAWCGSGLASAGRWGKPWWIATCWAGSPALSTRSCSASWSRRPTSCWNTSCRGAAARTTRPLATRGTGHLLNPRSWGSFYEYGADGKQWSWTPSWASGHSCRGGLGELSREH
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(2839987..2840082,2843473..2843692,2844663..2844762,2846994..2847330)
location: region:2839987-2847330:1
so has part: feature:2839987-2840082:1:exon
so has part: feature:2843473-2843692:1:exon
so has part: feature:2844663-2844762:1:exon
so has part: feature:2846994-2847330:1:exon

XP_023961900.1
type: Protein
SIO_000068: ncbiprotein

position:2839987:1
position: 2839987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847330:1
position: 2847330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2839987-2840082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2843473-2843692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2844663-2844762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846994-2847330:1:exon

PTRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: PTRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable peptidyl-tRNA hydrolase isoform X2
translation: MLRPLPKRLGRLLSRTMSHREADPRAAGKRVAGLGNYGLRGTRHNVGMAVLNHLAQKLNVAAQWKVDRRCCADVTITNVEEAELVLMKPRRLMNINGLSVASAAETYDLGVEDIYLVHDDLDKPLGKMAIKLGGSASAWCGSGLASAGRWGKPWWIATCWAGSPALSTRSCSASWSRRPTSCWNTSCRGAAARTTRPLATRGTGHLLNPRSWGSFYEYGADGKQWSWTPSWASGHSCRGGLGELSREH
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(2839987..2840076,2843473..2843692,2844663..2844762,2846994..2847330)
location: region:2839987-2847330:1
so has part: feature:2839987-2840076:1:exon
so has part: feature:2843473-2843692:1:exon
so has part: feature:2844663-2844762:1:exon
so has part: feature:2846994-2847330:1:exon

XP_042710130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2839987-2840076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2843473-2843692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2844663-2844762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846994-2847330:1:exon

PTRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: PTRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable peptidyl-tRNA hydrolase isoform X3
translation: MLRPLPKRLGRLLSRTMSHREADPRAAGKRVLVAGLGNYGLRGTRHNVGMAVLNHLAQKLNVAAQWKVDRRCCADVTITNVEEAELVLMKPRRLMNINGLSVASAAETYDLGVEDIYLVHDDLDKPLGKMAIKLGGSARGHNGVRSCISSLHSDCMVRLRVGIGRPVGEAMVDRYVLGRFTSAEHEVLQRILEQAADLLLEHILQRSSGKDHTPPGDTGDRTPP
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(2839987..2840082,2843473..2843692,2844663..2844762,2846257..2846302,2846994..2847206)
location: region:2839987-2847206:1
so has part: feature:2839987-2840082:1:exon
so has part: feature:2843473-2843692:1:exon
so has part: feature:2844663-2844762:1:exon
so has part: feature:2846257-2846302:1:exon
so has part: feature:2846994-2847206:1:exon

XP_023961902.1
type: Protein
SIO_000068: ncbiprotein

position:2847206:1
position: 2847206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2839987-2840082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2843473-2843692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2844663-2844762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846257-2846302:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2846994-2847206:1:exon

CFAP157
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: CFAP157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2847753..2858228)
location: region:2847753-2858228:-1
so has part: feature:2847753-2858228:-1:exon
subclass of: SO_0000010

101937455
type: Gene
SIO_000068: ncbigene

position:2847753:-1
position: 2847753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2858228:-1
position: 2858228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847753-2858228:-1:exon

CFAP157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CFAP157
product: cilia and flagella associated protein 157, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854193.1
SIO_010081: CFAP157
subclass of: SO_0000673
so part of: CFAP157
location: complement(join(2847753..2848035,2848337..2848502,2849204..2849391,2852325..2852475,2855146..2855300,2855632..2855899,2856535..2856688,2857765..2858220))
location: region:2847753-2858220:-1
so has part: feature:2857765-2858220:-1:exon
so has part: feature:2856535-2856688:-1:exon
so has part: feature:2855632-2855899:-1:exon
so has part: feature:2855146-2855300:-1:exon
so has part: feature:2852325-2852475:-1:exon
so has part: feature:2849204-2849391:-1:exon
so has part: feature:2848337-2848502:-1:exon
so has part: feature:2847753-2848035:-1:exon

position:2858220:-1
position: 2858220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857765-2858220:-1:exon

position:2857765:-1
position: 2857765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2856535-2856688:-1:exon

position:2856535:-1
position: 2856535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2856688:-1
position: 2856688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2855632-2855899:-1:exon

position:2855632:-1
position: 2855632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2855899:-1
position: 2855899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2855146-2855300:-1:exon

position:2855146:-1
position: 2855146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2855300:-1
position: 2855300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2852325-2852475:-1:exon

position:2852325:-1
position: 2852325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2852475:-1
position: 2852475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2849204-2849391:-1:exon

position:2849204:-1
position: 2849204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849391:-1
position: 2849391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2848337-2848502:-1:exon

position:2848337:-1
position: 2848337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848502:-1
position: 2848502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2847753-2848035:-1:exon

position:2848035:-1
position: 2848035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CFAP157
product: cilia and flagella associated protein 157, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293445.4
SIO_010081: CFAP157
subclass of: SO_0000673
so part of: CFAP157
location: complement(join(2847753..2848035,2848337..2848502,2849204..2849391,2852325..2852475,2855146..2855276,2855632..2855899,2856535..2856688,2857765..2858212))
location: region:2847753-2858212:-1
so has part: feature:2857765-2858212:-1:exon
so has part: feature:2856535-2856688:-1:exon
so has part: feature:2855632-2855899:-1:exon
so has part: feature:2855146-2855276:-1:exon
so has part: feature:2852325-2852475:-1:exon
so has part: feature:2849204-2849391:-1:exon
so has part: feature:2848337-2848502:-1:exon
so has part: feature:2847753-2848035:-1:exon

position:2858212:-1
position: 2858212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857765-2858212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856535-2856688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2855632-2855899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855146-2855276:-1:exon

position:2855276:-1
position: 2855276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2852325-2852475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849204-2849391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2848337-2848502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847753-2848035:-1:exon

CFAP157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CFAP157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 157 isoform X3
translation: MANDNKEIVAFLKKTLNQRVDEIADLNDQLVSLQQAKESEKDAFEAQLAQVRHEFQETKDQLTSENMLLSGKLAALEEFRIQKDELMGKFAALEEQLKKQEDDHKEYIYNLERKAVLDKDRLKKEMMQRVNVVAAEFRKVSNSQMAETTKRTIRENVAINVQLAKMSDRSYDLIQENDMLKEAQAEMQKQLEMLEHNEKQMAKNSLSNQKMIWMLTNKCKEQQVLVDEYRQQKEAMQQLKAAHEMLQKENQALRQELKELKEEVRRKMVEGQRQAKLLEEEQKLRKNAERILNQAVQALKDLLQERPSDEEDGDFDMMFQLRHQEMLRSLLGLLRRGTTAGPTHQEQVFGPQKTANREHGLESPAESQLHPAPGLKTSPVISHHLLVQRGQGAQLFHSMSKTGLLSKTTRIGTVRTYASATEPLMTSWSEEKRVKQQPILPLPEIAARHSFQGLLTK
SIO_010081: CFAP157
subclass of: SO_0000673
so part of: CFAP157
location: complement(join(2847928..2848035,2848337..2848502,2849204..2849391,2852325..2852475,2855146..2855276,2855632..2855899,2856535..2856688,2857765..2857972))
location: region:2847928-2857972:-1
so has part: feature:2857765-2857972:-1:exon
so has part: feature:2856535-2856688:-1:exon
so has part: feature:2855632-2855899:-1:exon
so has part: feature:2855146-2855276:-1:exon
so has part: feature:2852325-2852475:-1:exon
so has part: feature:2849204-2849391:-1:exon
so has part: feature:2848337-2848502:-1:exon
so has part: feature:2847928-2848035:-1:exon

XP_005293502.3
type: Protein
SIO_000068: ncbiprotein

position:2847928:-1
position: 2847928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2857972:-1
position: 2857972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857765-2857972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856535-2856688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2855632-2855899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855146-2855276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2852325-2852475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849204-2849391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2848337-2848502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847928-2848035:-1:exon

CFAP157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CFAP157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 157 isoform X1
translation: MANDNKEIVAFLKKTLNQRVDEIADLNDQLVSLQQAKESEKDAFEAQLAQVRHEFQETKDQLTSENMLLSGKLAALEEFRIQKDELMGKFAALEEQLKKQEDDHKEYIYNLERKAVLDKDRLKKEMMQRVNVVAAEFRKVSNSQMAETTKRTIRENVAINVQLAKMSDRSYDLIQENDMLKEAQAEMQKQLEMLEHNEKQMAKNSLSNQKLCSCCSFQMIWMLTNKCKEQQVLVDEYRQQKEAMQQLKAAHEMLQKENQALRQELKELKEEVRRKMVEGQRQAKLLEEEQKLRKNAERILNQAVQALKDLLQERPSDEEDGDFDMMFQLRHQEMLRSLLGLLRRGTTAGPTHQEQVFGPQKTANREHGLESPAESQLHPAPGLKTSPVISHHLLVQRGQGAQLFHSMSKTGLLSKTTRIGTVRTYASATEPLMTSWSEEKRVKQQPILPLPEIAARHSFQGLLTK
SIO_010081: CFAP157
subclass of: SO_0000673
so part of: CFAP157
location: complement(join(2847928..2848035,2848337..2848502,2849204..2849391,2852325..2852475,2855146..2855300,2855632..2855899,2856535..2856688,2857765..2857972))
location: region:2847928-2857972:-1
so has part: feature:2857765-2857972:-1:exon
so has part: feature:2856535-2856688:-1:exon
so has part: feature:2855632-2855899:-1:exon
so has part: feature:2855146-2855300:-1:exon
so has part: feature:2852325-2852475:-1:exon
so has part: feature:2849204-2849391:-1:exon
so has part: feature:2848337-2848502:-1:exon
so has part: feature:2847928-2848035:-1:exon

XP_042710127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2857765-2857972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856535-2856688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2855632-2855899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855146-2855300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2852325-2852475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849204-2849391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2848337-2848502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847928-2848035:-1:exon

CFAP157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CFAP157
product: cilia and flagella associated protein 157, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_042854194.1
SIO_010081: CFAP157
subclass of: SO_0000673
so part of: CFAP157
location: complement(join(2848032..2848153,2848337..2848502,2849204..2849391,2852325..2852475,2855146..2855300,2855632..2855899,2856535..2856688,2857765..2858228))
location: region:2848032-2858228:-1
so has part: feature:2857765-2858228:-1:exon
so has part: feature:2856535-2856688:-1:exon
so has part: feature:2855632-2855899:-1:exon
so has part: feature:2855146-2855300:-1:exon
so has part: feature:2852325-2852475:-1:exon
so has part: feature:2849204-2849391:-1:exon
so has part: feature:2848337-2848502:-1:exon
so has part: feature:2848032-2848153:-1:exon

position:2848032:-1
position: 2848032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857765-2858228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856535-2856688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2855632-2855899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855146-2855300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2852325-2852475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849204-2849391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2848337-2848502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2848032-2848153:-1:exon

position:2848153:-1
position: 2848153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CFAP157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 157 isoform X2
translation: MANDNKEIVAFLKKTLNQRVDEIADLNDQLVSLQQAKESEKDAFEAQLAQVRHEFQETKDQLTSENMLLSGKLAALEEFRIQKDELMGKFAALEEQLKKQEDDHKEYIYNLERKAVLDKDRLKKEMMQRVNVVAAEFRKVSNSQMAETTKRTIRENVAINVQLAKMSDRSYDLIQENDMLKEAQAEMQKQLEMLEHNEKQMAKNSLSNQKLCSCCSFQMIWMLTNKCKEQQVLVDEYRQQKEAMQQLKAAHEMLQKENQALRQELKELKEEVRRKMVEGQRQAKLLEEEQKLRKNAERILNQAVQALKDLLQERPSDEEDGDFDMMFQLRHQEMLRSLLGLLRRGTTAGPTHQEQVFGPQKTANREHGLESPAESQLHPAPGLKTSPVISHHLLVQRGQGAQLFHSMSKTGLLSKTTRIGTVRTYASATEGQGKRIQAPEALACPAPPPERDGVTDRRDSV
SIO_010081: CFAP157
subclass of: SO_0000673
so part of: CFAP157
location: complement(join(2848058..2848153,2848337..2848502,2849204..2849391,2852325..2852475,2855146..2855300,2855632..2855899,2856535..2856688,2857765..2857972))
location: region:2848058-2857972:-1
so has part: feature:2857765-2857972:-1:exon
so has part: feature:2856535-2856688:-1:exon
so has part: feature:2855632-2855899:-1:exon
so has part: feature:2855146-2855300:-1:exon
so has part: feature:2852325-2852475:-1:exon
so has part: feature:2849204-2849391:-1:exon
so has part: feature:2848337-2848502:-1:exon
so has part: feature:2848058-2848153:-1:exon

XP_042710128.1
type: Protein
SIO_000068: ncbiprotein

position:2848058:-1
position: 2848058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857765-2857972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856535-2856688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2855632-2855899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855146-2855300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2852325-2852475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849204-2849391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2848337-2848502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2848058-2848153:-1:exon

CERCAM
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: CERCAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2863862..2883313)
location: region:2863862-2883313:-1
so has part: feature:2863862-2883313:-1:exon
subclass of: SO_0000010

101936898
type: Gene
SIO_000068: ncbigene

position:2863862:-1
position: 2863862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2883313:-1
position: 2883313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2863862-2883313:-1:exon

CERCAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CERCAM
product: cerebral endothelial cell adhesion molecule, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106130.2
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(2863862..2864703,2866588..2866835,2868851..2869054,2869413..2869540,2869998..2870130,2871226..2871332,2872828..2872904,2873527..2873646,2874067..2874271,2875068..2875202,2875782..2875899,2876943..2877053,2883151..2883313))
location: region:2863862-2883313:-1
so has part: feature:2883151-2883313:-1:exon
so has part: feature:2876943-2877053:-1:exon
so has part: feature:2875782-2875899:-1:exon
so has part: feature:2875068-2875202:-1:exon
so has part: feature:2874067-2874271:-1:exon
so has part: feature:2873527-2873646:-1:exon
so has part: feature:2872828-2872904:-1:exon
so has part: feature:2871226-2871332:-1:exon
so has part: feature:2869998-2870130:-1:exon
so has part: feature:2869413-2869540:-1:exon
so has part: feature:2868851-2869054:-1:exon
so has part: feature:2866588-2866835:-1:exon
so has part: feature:2863862-2864703:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883151-2883313:-1:exon

position:2883151:-1
position: 2883151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2876943-2877053:-1:exon

position:2876943:-1
position: 2876943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877053:-1
position: 2877053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2875782-2875899:-1:exon

position:2875782:-1
position: 2875782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875899:-1
position: 2875899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2875068-2875202:-1:exon

position:2875068:-1
position: 2875068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875202:-1
position: 2875202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2874067-2874271:-1:exon

position:2874067:-1
position: 2874067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2874271:-1
position: 2874271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2873527-2873646:-1:exon

position:2873527:-1
position: 2873527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873646:-1
position: 2873646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2872828-2872904:-1:exon

position:2872828:-1
position: 2872828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2872904:-1
position: 2872904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2871226-2871332:-1:exon

position:2871226:-1
position: 2871226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871332:-1
position: 2871332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2869998-2870130:-1:exon

position:2869998:-1
position: 2869998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2870130:-1
position: 2870130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2869413-2869540:-1:exon

position:2869413:-1
position: 2869413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869540:-1
position: 2869540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2868851-2869054:-1:exon

position:2868851:-1
position: 2868851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869054:-1
position: 2869054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2866588-2866835:-1:exon

position:2866588:-1
position: 2866588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866835:-1
position: 2866835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2863862-2864703:-1:exon

position:2864703:-1
position: 2864703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CERCAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: CERCAM
product: cerebral endothelial cell adhesion molecule, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169256.3
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(2863862..2864703,2866588..2866835,2868851..2869054,2869413..2869540,2869998..2870130,2871226..2871332,2872828..2872904,2873527..2873646,2874067..2874271,2875068..2875202,2875782..2875899,2876943..2877053,2880419..2880695))
location: region:2863862-2880695:-1
so has part: feature:2880419-2880695:-1:exon
so has part: feature:2876943-2877053:-1:exon
so has part: feature:2875782-2875899:-1:exon
so has part: feature:2875068-2875202:-1:exon
so has part: feature:2874067-2874271:-1:exon
so has part: feature:2873527-2873646:-1:exon
so has part: feature:2872828-2872904:-1:exon
so has part: feature:2871226-2871332:-1:exon
so has part: feature:2869998-2870130:-1:exon
so has part: feature:2869413-2869540:-1:exon
so has part: feature:2868851-2869054:-1:exon
so has part: feature:2866588-2866835:-1:exon
so has part: feature:2863862-2864703:-1:exon

position:2880695:-1
position: 2880695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880419-2880695:-1:exon

position:2880419:-1
position: 2880419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2876943-2877053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2875782-2875899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2875068-2875202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2874067-2874271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2873527-2873646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2872828-2872904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2871226-2871332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2869998-2870130:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2869413-2869540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2868851-2869054:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2866588-2866835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2863862-2864703:-1:exon

CERCAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CERCAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive glycosyltransferase 25 family member 3 isoform X1
translation: MRPPAAALLRCALLLLLRGCPGQEEEGGRPAGQQQELPTVVIAILARNSEHSLPHYLGALERLDYPKERISVWCATDHNIDNTTEILWEWLTAMEKHYRYIEWKSVEEPSSYPDELGPKHWTDERYEHVMRLKQEALSFARAKRADYLLLTDTDSILTNNQTLTFLISQNKSVIAPMLDSQTYYSNFWCGITPQGYYRRTADYFPTKNRQRVGCFAVPMVYATFLLDLRKEGTSELAFHPPHPNYTWPFDDIIVFAYSCQAAGVQIYVCNQERFGYINVPVKSHQTLEDERINFVHLILEAMVDGPPMYPSEHVSLSPKHLGKMGFDEIFLISLVRRPDRRQRMLSSLYELEIDPLVVDAVDGSALNSSDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEIVARGLEKSVVFEDDVRFEAYFKVRLTRLMEELEWAQLDWDLIYLGRKQVNSDDEEPVEDVRNLVVAEYSYWTLAYIISQRGAQKLIAAEPLSKMLPVDEFLPIMSDKHPNEDYKQHFANRDLLVYSVHPLLAYPTHYAGDSKWLSDTETSTIWDDDSKKTDWSGSQKTLKDSRSNAGHSFRSTSRDEL
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(2866598..2866835,2868851..2869054,2869413..2869540,2869998..2870130,2871226..2871332,2872828..2872904,2873527..2873646,2874067..2874271,2875068..2875202,2875782..2875899,2876943..2877053,2880419..2880636))
location: region:2866598-2880636:-1
so has part: feature:2880419-2880636:-1:exon
so has part: feature:2876943-2877053:-1:exon
so has part: feature:2875782-2875899:-1:exon
so has part: feature:2875068-2875202:-1:exon
so has part: feature:2874067-2874271:-1:exon
so has part: feature:2873527-2873646:-1:exon
so has part: feature:2872828-2872904:-1:exon
so has part: feature:2871226-2871332:-1:exon
so has part: feature:2869998-2870130:-1:exon
so has part: feature:2869413-2869540:-1:exon
so has part: feature:2868851-2869054:-1:exon
so has part: feature:2866598-2866835:-1:exon

XP_008167478.1
type: Protein
SIO_000068: ncbiprotein

position:2866598:-1
position: 2866598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2880636:-1
position: 2880636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880419-2880636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2876943-2877053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2875782-2875899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2875068-2875202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2874067-2874271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2873527-2873646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2872828-2872904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2871226-2871332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2869998-2870130:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2869413-2869540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2868851-2869054:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2866598-2866835:-1:exon

CERCAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: CERCAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive glycosyltransferase 25 family member 3 isoform X2
translation: MEKHYRYIEWKSVEEPSSYPDELGPKHWTDERYEHVMRLKQEALSFARAKRADYLLLTDTDSILTNNQTLTFLISQNKSVIAPMLDSQTYYSNFWCGITPQGYYRRTADYFPTKNRQRVGCFAVPMVYATFLLDLRKEGTSELAFHPPHPNYTWPFDDIIVFAYSCQAAGVQIYVCNQERFGYINVPVKSHQTLEDERINFVHLILEAMVDGPPMYPSEHVSLSPKHLGKMGFDEIFLISLVRRPDRRQRMLSSLYELEIDPLVVDAVDGSALNSSDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEIVARGLEKSVVFEDDVRFEAYFKVRLTRLMEELEWAQLDWDLIYLGRKQVNSDDEEPVEDVRNLVVAEYSYWTLAYIISQRGAQKLIAAEPLSKMLPVDEFLPIMSDKHPNEDYKQHFANRDLLVYSVHPLLAYPTHYAGDSKWLSDTETSTIWDDDSKKTDWSGSQKTLKDSRSNAGHSFRSTSRDEL
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(2866598..2866835,2868851..2869054,2869413..2869540,2869998..2870130,2871226..2871332,2872828..2872904,2873527..2873646,2874067..2874271,2875068..2875202,2875782..2875899,2876943..2876992))
location: region:2866598-2876992:-1
so has part: feature:2876943-2876992:-1:exon
so has part: feature:2875782-2875899:-1:exon
so has part: feature:2875068-2875202:-1:exon
so has part: feature:2874067-2874271:-1:exon
so has part: feature:2873527-2873646:-1:exon
so has part: feature:2872828-2872904:-1:exon
so has part: feature:2871226-2871332:-1:exon
so has part: feature:2869998-2870130:-1:exon
so has part: feature:2869413-2869540:-1:exon
so has part: feature:2868851-2869054:-1:exon
so has part: feature:2866598-2866835:-1:exon

XP_023961898.1
type: Protein
SIO_000068: ncbiprotein

position:2876992:-1
position: 2876992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876943-2876992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2875782-2875899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2875068-2875202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2874067-2874271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2873527-2873646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2872828-2872904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2871226-2871332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2869998-2870130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2869413-2869540:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2868851-2869054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2866598-2866835:-1:exon

URM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: URM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2914600..2940183)
location: region:2914600-2940183:-1
so has part: feature:2914600-2940183:-1:exon
subclass of: SO_0000010

101936623
type: Gene
SIO_000068: ncbigene

position:2914600:-1
position: 2914600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940183:-1
position: 2940183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2914600-2940183:-1:exon

URM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: URM1
product: ubiquitin related modifier 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293441.3
SIO_010081: URM1
subclass of: SO_0000673
so part of: URM1
location: complement(join(2914600..2914830,2915773..2915821,2917156..2917237,2931987..2932057,2940048..2940183))
location: region:2914600-2940183:-1
so has part: feature:2940048-2940183:-1:exon
so has part: feature:2931987-2932057:-1:exon
so has part: feature:2917156-2917237:-1:exon
so has part: feature:2915773-2915821:-1:exon
so has part: feature:2914600-2914830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2940048-2940183:-1:exon

position:2940048:-1
position: 2940048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2931987-2932057:-1:exon

position:2931987:-1
position: 2931987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932057:-1
position: 2932057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2917156-2917237:-1:exon

position:2917156:-1
position: 2917156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2917237:-1
position: 2917237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2915773-2915821:-1:exon

position:2915773:-1
position: 2915773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915821:-1
position: 2915821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2914600-2914830:-1:exon

position:2914830:-1
position: 2914830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: URM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-related modifier 1
translation: MAAPMSLLVEFGGGAELLFDGVKKHQVTLPCQPEPWDIRNLLKWIKQNLLKERPELFIQGDTVRPGILVLINDADWELMGELDYKLQDQDNVVFISTLHGG
SIO_010081: URM1
subclass of: SO_0000673
so part of: URM1
location: complement(join(2914762..2914830,2915773..2915821,2917156..2917237,2931987..2932057,2940048..2940082))
location: region:2914762-2940082:-1
so has part: feature:2940048-2940082:-1:exon
so has part: feature:2931987-2932057:-1:exon
so has part: feature:2917156-2917237:-1:exon
so has part: feature:2915773-2915821:-1:exon
so has part: feature:2914762-2914830:-1:exon

XP_005293498.1
type: Protein
SIO_000068: ncbiprotein

position:2914762:-1
position: 2914762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940082:-1
position: 2940082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2940048-2940082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2931987-2932057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2917156-2917237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2915773-2915821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2914762-2914830:-1:exon

SLC27A4
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: SLC27A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2956016..2979978)
location: region:2956016-2979978:-1
so has part: feature:2956016-2979978:-1:exon
subclass of: SO_0000010

101936351
type: Gene
SIO_000068: ncbigene

position:2956016:-1
position: 2956016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2979978:-1
position: 2979978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2956016-2979978:-1:exon

SLC27A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SLC27A4
product: solute carrier family 27 member 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854197.1
SIO_010081: SLC27A4
subclass of: SO_0000673
so part of: SLC27A4
location: complement(join(2956016..2957363,2958343..2958489,2959334..2959498,2960145..2960282,2960943..2960971,2961972..2962069,2963578..2963787,2964461..2964570,2965259..2965350,2965475..2965544,2966122..2966280,2968264..2968658,2969441..2969687,2979696..2979978))
location: region:2956016-2979978:-1
so has part: feature:2979696-2979978:-1:exon
so has part: feature:2969441-2969687:-1:exon
so has part: feature:2968264-2968658:-1:exon
so has part: feature:2966122-2966280:-1:exon
so has part: feature:2965475-2965544:-1:exon
so has part: feature:2965259-2965350:-1:exon
so has part: feature:2964461-2964570:-1:exon
so has part: feature:2963578-2963787:-1:exon
so has part: feature:2961972-2962069:-1:exon
so has part: feature:2960943-2960971:-1:exon
so has part: feature:2960145-2960282:-1:exon
so has part: feature:2959334-2959498:-1:exon
so has part: feature:2958343-2958489:-1:exon
so has part: feature:2956016-2957363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2979696-2979978:-1:exon

position:2979696:-1
position: 2979696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2969441-2969687:-1:exon

position:2969441:-1
position: 2969441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969687:-1
position: 2969687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2968264-2968658:-1:exon

position:2968264:-1
position: 2968264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968658:-1
position: 2968658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2966122-2966280:-1:exon

position:2966122:-1
position: 2966122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966280:-1
position: 2966280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2965475-2965544:-1:exon

position:2965475:-1
position: 2965475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2965544:-1
position: 2965544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2965259-2965350:-1:exon

position:2965259:-1
position: 2965259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2965350:-1
position: 2965350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2964461-2964570:-1:exon

position:2964461:-1
position: 2964461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964570:-1
position: 2964570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2963578-2963787:-1:exon

position:2963578:-1
position: 2963578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2963787:-1
position: 2963787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2961972-2962069:-1:exon

position:2961972:-1
position: 2961972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962069:-1
position: 2962069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2960943-2960971:-1:exon

position:2960943:-1
position: 2960943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960971:-1
position: 2960971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2960145-2960282:-1:exon

position:2960145:-1
position: 2960145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960282:-1
position: 2960282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2959334-2959498:-1:exon

position:2959334:-1
position: 2959334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2959498:-1
position: 2959498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2958343-2958489:-1:exon

position:2958343:-1
position: 2958343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958489:-1
position: 2958489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2956016-2957363:-1:exon

position:2957363:-1
position: 2957363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC27A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SLC27A4
product: solute carrier family 27 member 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106129.2
SIO_010081: SLC27A4
subclass of: SO_0000673
so part of: SLC27A4
location: complement(join(2956016..2957363,2958343..2958489,2959334..2959498,2960145..2960282,2960943..2960971,2961972..2962069,2963578..2963787,2964461..2964570,2965259..2965350,2965475..2965544,2966122..2966280,2968264..2968658,2969441..2969607,2979696..2979833))
location: region:2956016-2979833:-1
so has part: feature:2979696-2979833:-1:exon
so has part: feature:2969441-2969607:-1:exon
so has part: feature:2968264-2968658:-1:exon
so has part: feature:2966122-2966280:-1:exon
so has part: feature:2965475-2965544:-1:exon
so has part: feature:2965259-2965350:-1:exon
so has part: feature:2964461-2964570:-1:exon
so has part: feature:2963578-2963787:-1:exon
so has part: feature:2961972-2962069:-1:exon
so has part: feature:2960943-2960971:-1:exon
so has part: feature:2960145-2960282:-1:exon
so has part: feature:2959334-2959498:-1:exon
so has part: feature:2958343-2958489:-1:exon
so has part: feature:2956016-2957363:-1:exon

position:2979833:-1
position: 2979833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2979696-2979833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2969441-2969607:-1:exon

position:2969607:-1
position: 2969607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2968264-2968658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2966122-2966280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2965475-2965544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2965259-2965350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2964461-2964570:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2963578-2963787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2961972-2962069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2960943-2960971:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2960145-2960282:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2959334-2959498:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2958343-2958489:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2956016-2957363:-1:exon

SLC27A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SLC27A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain fatty acid transport protein 4
translation: MLRLAALTALFVLFRLVLKLSWVQVIPALFIFYLGSGGWKFLRIVFKTIRRDVTTGLVLLRVKWQVWRHLRGKNTIPKIFQETVRKHPEKTALIFQGTGESWTFRQLDEYSNQVANYLYEQGFRSGDVVALFMESRNQYVGLWLGMAKIGVEAALVNSHLRMEALLHCINISNSKAVVFGAEMMEAMQEVQPSLGKSVRLFCSGERNPESAPPSTEHLDPFLEMAPRHLPSPPKKGFLDKLFYIYTSGTTGMPKAAIVVNCRYYRMASLVYYGFRMRPDDVMYDCLPLYHAAGNIVGIGQCLLQGMTVVIRKKFSASHFWDDCVKYNCTIVQYIGEICRYLLNQPSQEVERRHHVRMALGNGLRMSIWKEFISRFGIPQIAEFYGATECNCSLGNFDNNVGSCGFNSRILPGIYPVTLVRVDEDTMELIRGPDGLCIPCKPGEPGQLVGRIIQSDPLLHFDGYLNQSATSKKIAHDVFAKGDLTYLTGDVLMMDEYGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRILHMTDVVVYGVEVPGTEGKAGMAAIADPKNSCNLESFANELKKALPLYARPVFLRVLAEVHKTSTYKFQKMELRRDGFDPAVVKDKLYFLDSRQGCYLPLDMEAFRRIQSGQQKL
SIO_010081: SLC27A4
subclass of: SO_0000673
so part of: SLC27A4
location: complement(join(2957206..2957363,2958343..2958489,2959334..2959498,2960145..2960282,2960943..2960971,2961972..2962069,2963578..2963787,2964461..2964570,2965259..2965350,2965475..2965544,2966122..2966280,2968264..2968658,2969441..2969601))
location: region:2957206-2969601:-1
so has part: feature:2969441-2969601:-1:exon
so has part: feature:2968264-2968658:-1:exon
so has part: feature:2966122-2966280:-1:exon
so has part: feature:2965475-2965544:-1:exon
so has part: feature:2965259-2965350:-1:exon
so has part: feature:2964461-2964570:-1:exon
so has part: feature:2963578-2963787:-1:exon
so has part: feature:2961972-2962069:-1:exon
so has part: feature:2960943-2960971:-1:exon
so has part: feature:2960145-2960282:-1:exon
so has part: feature:2959334-2959498:-1:exon
so has part: feature:2958343-2958489:-1:exon
so has part: feature:2957206-2957363:-1:exon

XP_023961897.1
type: Protein
SIO_000068: ncbiprotein

position:2957206:-1
position: 2957206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969601:-1
position: 2969601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2969441-2969601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2968264-2968658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2966122-2966280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2965475-2965544:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2965259-2965350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2964461-2964570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2963578-2963787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2961972-2962069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2960943-2960971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2960145-2960282:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2959334-2959498:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2958343-2958489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2957206-2957363:-1:exon

SLC27A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SLC27A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain fatty acid transport protein 4
translation: MLRLAALTALFVLFRLVLKLSWVQVIPALFIFYLGSGGWKFLRIVFKTIRRDVTTGLVLLRVKWQVWRHLRGKNTIPKIFQETVRKHPEKTALIFQGTGESWTFRQLDEYSNQVANYLYEQGFRSGDVVALFMESRNQYVGLWLGMAKIGVEAALVNSHLRMEALLHCINISNSKAVVFGAEMMEAMQEVQPSLGKSVRLFCSGERNPESAPPSTEHLDPFLEMAPRHLPSPPKKGFLDKLFYIYTSGTTGMPKAAIVVNCRYYRMASLVYYGFRMRPDDVMYDCLPLYHAAGNIVGIGQCLLQGMTVVIRKKFSASHFWDDCVKYNCTIVQYIGEICRYLLNQPSQEVERRHHVRMALGNGLRMSIWKEFISRFGIPQIAEFYGATECNCSLGNFDNNVGSCGFNSRILPGIYPVTLVRVDEDTMELIRGPDGLCIPCKPGEPGQLVGRIIQSDPLLHFDGYLNQSATSKKIAHDVFAKGDLTYLTGDVLMMDEYGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRILHMTDVVVYGVEVPGTEGKAGMAAIADPKNSCNLESFANELKKALPLYARPVFLRVLAEVHKTSTYKFQKMELRRDGFDPAVVKDKLYFLDSRQGCYLPLDMEAFRRIQSGQQKL
SIO_010081: SLC27A4
subclass of: SO_0000673
so part of: SLC27A4
location: complement(join(2957206..2957363,2958343..2958489,2959334..2959498,2960145..2960282,2960943..2960971,2961972..2962069,2963578..2963787,2964461..2964570,2965259..2965350,2965475..2965544,2966122..2966280,2968264..2968658,2969441..2969601))
location: region:2957206-2969601:-1
so has part: feature:2969441-2969601:-1:exon
so has part: feature:2968264-2968658:-1:exon
so has part: feature:2966122-2966280:-1:exon
so has part: feature:2965475-2965544:-1:exon
so has part: feature:2965259-2965350:-1:exon
so has part: feature:2964461-2964570:-1:exon
so has part: feature:2963578-2963787:-1:exon
so has part: feature:2961972-2962069:-1:exon
so has part: feature:2960943-2960971:-1:exon
so has part: feature:2960145-2960282:-1:exon
so has part: feature:2959334-2959498:-1:exon
so has part: feature:2958343-2958489:-1:exon
so has part: feature:2957206-2957363:-1:exon

XP_042710131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2969441-2969601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2968264-2968658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2966122-2966280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2965475-2965544:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2965259-2965350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2964461-2964570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2963578-2963787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2961972-2962069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2960943-2960971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2960145-2960282:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2959334-2959498:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2958343-2958489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2957206-2957363:-1:exon

TRNAR-UCU
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: TRNAR-UCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2980496..2980588
location: region:2980496-2980588:1
so has part: feature:2980496-2980588:1:exon
subclass of: SO_0000663

112059684
type: Gene
SIO_000068: ncbigene

position:2980496:1
position: 2980496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2980588:1
position: 2980588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2980496-2980588:1:exon

TRNAR-UCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8478
gene: TRNAR-UCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2980529..2980531,aa:Arg,seq:tct)
SIO_010081: TRNAR-UCU
subclass of: SO_0000673
so part of: TRNAR-UCU
location: join(2980496..2980532,2980553..2980588)
location: region:2980496-2980588:1
so has part: feature:2980496-2980532:1:exon
so has part: feature:2980553-2980588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2980496-2980532:1:exon

position:2980532:1
position: 2980532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2980553-2980588:1:exon

position:2980553:1
position: 2980553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COQ4
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: COQ4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2985126..2996585)
location: region:2985126-2996585:-1
so has part: feature:2985126-2996585:-1:exon
subclass of: SO_0000010

101936089
type: Gene
SIO_000068: ncbigene

position:2985126:-1
position: 2985126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2996585:-1
position: 2996585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985126-2996585:-1:exon

COQ4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: COQ4
product: coenzyme Q4
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_008169254.3
SIO_010081: COQ4
subclass of: SO_0000673
so part of: COQ4
location: complement(join(2985126..2986748,2987753..2987846,2991865..2991994,2992460..2992563,2994311..2994407,2995178..2995348,2996364..2996585))
location: region:2985126-2996585:-1
so has part: feature:2996364-2996585:-1:exon
so has part: feature:2995178-2995348:-1:exon
so has part: feature:2994311-2994407:-1:exon
so has part: feature:2992460-2992563:-1:exon
so has part: feature:2991865-2991994:-1:exon
so has part: feature:2987753-2987846:-1:exon
so has part: feature:2985126-2986748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2996364-2996585:-1:exon

position:2996364:-1
position: 2996364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2995178-2995348:-1:exon

position:2995178:-1
position: 2995178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2995348:-1
position: 2995348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2994311-2994407:-1:exon

position:2994311:-1
position: 2994311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2994407:-1
position: 2994407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2992460-2992563:-1:exon

position:2992460:-1
position: 2992460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2992563:-1
position: 2992563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2991865-2991994:-1:exon

position:2991865:-1
position: 2991865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2991994:-1
position: 2991994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2987753-2987846:-1:exon

position:2987753:-1
position: 2987753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2987846:-1
position: 2987846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2985126-2986748:-1:exon

position:2986748:-1
position: 2986748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COQ4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: COQ4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
translation: MLPICWLGRARRAGWLRRAPGSLRGLRPLALGSPAASVGRGDQLPHTDLTVTAEEHVDEERYYQLYPGHIPTSPLQKVLLSAGSAFMALYNPYRHDMVAVLGETTGSSALRRLRDKMRLDPEGYQILQERPRIRLSTLDVTGLQGLPDGTFGREYVRFLDSNRVSPDTRMPVKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAIQTGLPMCILGAVFGPVRLNARKLQILTTELIPWAVQSGRNASCILNFYYENRWEQTVESLREEIGILHPPAICV
SIO_010081: COQ4
subclass of: SO_0000673
so part of: COQ4
location: complement(join(2986586..2986748,2987753..2987846,2991865..2991994,2992460..2992563,2994311..2994407,2995178..2995348,2996364..2996478))
location: region:2986586-2996478:-1
so has part: feature:2996364-2996478:-1:exon
so has part: feature:2995178-2995348:-1:exon
so has part: feature:2994311-2994407:-1:exon
so has part: feature:2992460-2992563:-1:exon
so has part: feature:2991865-2991994:-1:exon
so has part: feature:2987753-2987846:-1:exon
so has part: feature:2986586-2986748:-1:exon

XP_008167476.1
type: Protein
SIO_000068: ncbiprotein

position:2986586:-1
position: 2986586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2996478:-1
position: 2996478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2996364-2996478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2995178-2995348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2994311-2994407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2992460-2992563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2991865-2991994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2987753-2987846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2986586-2986748:-1:exon

TRUB2
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: TRUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2997769..3009355
location: region:2997769-3009355:1
so has part: feature:2997769-3009355:1:exon
subclass of: SO_0000010

101935820
type: Gene
SIO_000068: ncbigene

position:2997769:1
position: 2997769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3009355:1
position: 3009355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997769-3009355:1:exon

TRUB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: TRUB2
product: TruB pseudouridine synthase family member 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024106128.2
SIO_010081: TRUB2
subclass of: SO_0000673
so part of: TRUB2
location: join(2997769..2998124,3001087..3001218,3001814..3001888,3002566..3002699,3004099..3004180,3004903..3004975,3006099..3006235,3007805..3009355)
location: region:2997769-3009355:1
so has part: feature:2997769-2998124:1:exon
so has part: feature:3001087-3001218:1:exon
so has part: feature:3001814-3001888:1:exon
so has part: feature:3002566-3002699:1:exon
so has part: feature:3004099-3004180:1:exon
so has part: feature:3004903-3004975:1:exon
so has part: feature:3006099-3006235:1:exon
so has part: feature:3007805-3009355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2997769-2998124:1:exon

position:2998124:1
position: 2998124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3001087-3001218:1:exon

position:3001087:1
position: 3001087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3001218:1
position: 3001218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3001814-3001888:1:exon

position:3001814:1
position: 3001814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3001888:1
position: 3001888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3002566-3002699:1:exon

position:3002566:1
position: 3002566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3002699:1
position: 3002699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3004099-3004180:1:exon

position:3004099:1
position: 3004099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3004180:1
position: 3004180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3004903-3004975:1:exon

position:3004903:1
position: 3004903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3004975:1
position: 3004975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3006099-3006235:1:exon

position:3006099:1
position: 3006099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006235:1
position: 3006235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3007805-3009355:1:exon

position:3007805:1
position: 3007805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRUB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: TRUB2
product: TruB pseudouridine synthase family member 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005293438.4
SIO_010081: TRUB2
subclass of: SO_0000673
so part of: TRUB2
location: join(2997781..2998124,3001087..3001218,3001814..3001888,3002566..3002627,3004099..3004180,3004903..3004975,3006099..3006235,3007805..3009355)
location: region:2997781-3009355:1
so has part: feature:2997781-2998124:1:exon
so has part: feature:3001087-3001218:1:exon
so has part: feature:3001814-3001888:1:exon
so has part: feature:3002566-3002627:1:exon
so has part: feature:3004099-3004180:1:exon
so has part: feature:3004903-3004975:1:exon
so has part: feature:3006099-3006235:1:exon
so has part: feature:3007805-3009355:1:exon

position:2997781:1
position: 2997781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997781-2998124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3001087-3001218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3001814-3001888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3002566-3002627:1:exon

position:3002627:1
position: 3002627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3004099-3004180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004903-3004975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3006099-3006235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3007805-3009355:1:exon

TRUB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: TRUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial mRNA pseudouridine synthase TRUB2 isoform X1
translation: MAAGRAARTRLNGLFAVYKPPGVASIRVRDTLETLLLKELNSLEQPTVPQQVRFLPTTVEGNAGKELTLTVTQLPVLAAHPLVKGPEFTHLKIGAGHRLDTKSSGVFVLGVGHGNKLLTDMYNAHLTRVCSGTEPVWGLLCVTPILTRNQGQAYTVRGLFGKATDDFSDTGRLIEKTTFDHITGDKLERILAVIQGTNHKALLMYSNIDLKTQEAYELAVEGLIRPMEKTPPLITAIRCLQFAPPEFQLEIQCLHETQQYLRKIVHEIGLELKSTAVCTQVRRIRDGFFTLDNALPRTHWNLQNIRNSIKDSKIKVKVGLQRSLSHQARSGKSHTDMDQVAESELHSTEGTSASDLTQNEITTC
SIO_010081: TRUB2
subclass of: SO_0000673
so part of: TRUB2
location: join(2998010..2998124,3001087..3001218,3001814..3001888,3002566..3002699,3004099..3004180,3004903..3004975,3006099..3006235,3007805..3008151)
location: region:2998010-3008151:1
so has part: feature:2998010-2998124:1:exon
so has part: feature:3001087-3001218:1:exon
so has part: feature:3001814-3001888:1:exon
so has part: feature:3002566-3002699:1:exon
so has part: feature:3004099-3004180:1:exon
so has part: feature:3004903-3004975:1:exon
so has part: feature:3006099-3006235:1:exon
so has part: feature:3007805-3008151:1:exon

XP_023961896.1
type: Protein
SIO_000068: ncbiprotein

position:2998010:1
position: 2998010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3008151:1
position: 3008151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2998010-2998124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3001087-3001218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3001814-3001888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3002566-3002699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004099-3004180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004903-3004975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3006099-3006235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3007805-3008151:1:exon

TRUB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: TRUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial mRNA pseudouridine synthase TRUB2 isoform X2
translation: MAAGRAARTRLNGLFAVYKPPGVASIRVRDTLETLLLKELNSLEQPTVPQQVRFLPTTVEGNAGKELTLTVTQLPVLAAHPLVKGPEFTHLKIGAGHRLDTKSSGVFVLGVGHGNKLLTDMYNAHLTRAYTVRGLFGKATDDFSDTGRLIEKTTFDHITGDKLERILAVIQGTNHKALLMYSNIDLKTQEAYELAVEGLIRPMEKTPPLITAIRCLQFAPPEFQLEIQCLHETQQYLRKIVHEIGLELKSTAVCTQVRRIRDGFFTLDNALPRTHWNLQNIRNSIKDSKIKVKVGLQRSLSHQARSGKSHTDMDQVAESELHSTEGTSASDLTQNEITTC
SIO_010081: TRUB2
subclass of: SO_0000673
so part of: TRUB2
location: join(2998010..2998124,3001087..3001218,3001814..3001888,3002566..3002627,3004099..3004180,3004903..3004975,3006099..3006235,3007805..3008151)
location: region:2998010-3008151:1
so has part: feature:2998010-2998124:1:exon
so has part: feature:3001087-3001218:1:exon
so has part: feature:3001814-3001888:1:exon
so has part: feature:3002566-3002627:1:exon
so has part: feature:3004099-3004180:1:exon
so has part: feature:3004903-3004975:1:exon
so has part: feature:3006099-3006235:1:exon
so has part: feature:3007805-3008151:1:exon

XP_005293495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2998010-2998124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3001087-3001218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3001814-3001888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3002566-3002627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004099-3004180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004903-3004975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3006099-3006235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3007805-3008151:1:exon

SWI5
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: SWI5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3012156..3018606)
location: region:3012156-3018606:-1
so has part: feature:3012156-3018606:-1:exon
subclass of: SO_0000010

101935545
type: Gene
SIO_000068: ncbigene

position:3012156:-1
position: 3012156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018606:-1
position: 3018606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012156-3018606:-1:exon

SWI5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: SWI5
product: SWI5 homologous recombination repair protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169253.3
SIO_010081: SWI5
subclass of: SO_0000673
so part of: SWI5
location: complement(join(3012156..3012852,3013440..3013534,3014185..3014306,3017794..3017842,3018434..3018606))
location: region:3012156-3018606:-1
so has part: feature:3018434-3018606:-1:exon
so has part: feature:3017794-3017842:-1:exon
so has part: feature:3014185-3014306:-1:exon
so has part: feature:3013440-3013534:-1:exon
so has part: feature:3012156-3012852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3018434-3018606:-1:exon

position:3018434:-1
position: 3018434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3017794-3017842:-1:exon

position:3017794:-1
position: 3017794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017842:-1
position: 3017842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3014185-3014306:-1:exon

position:3014185:-1
position: 3014185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014306:-1
position: 3014306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3013440-3013534:-1:exon

position:3013440:-1
position: 3013440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013534:-1
position: 3013534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3012156-3012852:-1:exon

position:3012852:-1
position: 3012852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SWI5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8478
gene: SWI5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein SWI5 homolog
translation: MQSGNEAYVDSRPSGLQAALDNHEQGPTLCGEWEQSPGLRGRSGPSPRPFLRRTPTGILRNCNAGFKSPIQSPRSCQSDGVNKEALQCEVEELKQEDLALDQEIAQLLAEGYSLEELEKHISLLHEYNDIKDAGQMLLGKLATIRGVTTKELYPKFDLELTD
SIO_010081: SWI5
subclass of: SO_0000673
so part of: SWI5
location: complement(join(3012788..3012852,3013440..3013534,3014185..3014306,3017794..3017842,3018434..3018591))
location: region:3012788-3018591:-1
so has part: feature:3018434-3018591:-1:exon
so has part: feature:3017794-3017842:-1:exon
so has part: feature:3014185-3014306:-1:exon
so has part: feature:3013440-3013534:-1:exon
so has part: feature:3012788-3012852:-1:exon

XP_008167475.1
type: Protein
SIO_000068: ncbiprotein

position:3012788:-1
position: 3012788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018591:-1
position: 3018591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3018434-3018591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3017794-3017842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3014185-3014306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3013440-3013534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3012788-3012852:-1:exon

GOLGA2
type: Gene
subclass of: SO_0000704
RO_0002162: 8478
gene: GOLGA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3022159..3047071
location: region:3022159-3047071:1
so has part: feature:3022159-3047071:1:exon
subclass of: SO_0000010

101935265
type: Gene
SIO_000068: ncbigene

position:3022159:1
position: 3022159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3047071:1
position: 3047071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3022159-3047071:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: GOLGA2
product: golgin A2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042854200.1
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3022159..3022400,3023634..3023756,3024132..3024212,3029687..3029821,3030468..3030511,3030672..3030735,3031258..3031317,3031756..3031836,3033683..3033721,3034796..3034858,3035128..3035221,3035887..3035993,3036538..3036596,3036809..3036950,3037650..3037739,3037899..3038006,3038113..3038200,3038775..3039121,3040665..3040889,3041132..3041231,3041322..3041410,3042259..3042412,3042553..3042620,3043235..3043337,3043675..3043781,3044368..3044539,3044653..3047071)
location: region:3022159-3047071:1
so has part: feature:3022159-3022400:1:exon
so has part: feature:3023634-3023756:1:exon
so has part: feature:3024132-3024212:1:exon
so has part: feature:3029687-3029821:1:exon
so has part: feature:3030468-3030511:1:exon
so has part: feature:3030672-3030735:1:exon
so has part: feature:3031258-3031317:1:exon
so has part: feature:3031756-3031836:1:exon
so has part: feature:3033683-3033721:1:exon
so has part: feature:3034796-3034858:1:exon
so has part: feature:3035128-3035221:1:exon
so has part: feature:3035887-3035993:1:exon
so has part: feature:3036538-3036596:1:exon
so has part: feature:3036809-3036950:1:exon
so has part: feature:3037650-3037739:1:exon
so has part: feature:3037899-3038006:1:exon
so has part: feature:3038113-3038200:1:exon
so has part: feature:3038775-3039121:1:exon
so has part: feature:3040665-3040889:1:exon
so has part: feature:3041132-3041231:1:exon
so has part: feature:3041322-3041410:1:exon
so has part: feature:3042259-3042412:1:exon
so has part: feature:3042553-3042620:1:exon
so has part: feature:3043235-3043337:1:exon
so has part: feature:3043675-3043781:1:exon
so has part: feature:3044368-3044539:1:exon
so has part: feature:3044653-3047071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3022159-3022400:1:exon

position:3022400:1
position: 3022400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3023634-3023756:1:exon

position:3023634:1
position: 3023634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3023756:1
position: 3023756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3024132-3024212:1:exon

position:3024132:1
position: 3024132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3024212:1
position: 3024212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3029687-3029821:1:exon

position:3029687:1
position: 3029687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029821:1
position: 3029821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3030468-3030511:1:exon

position:3030468:1
position: 3030468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030511:1
position: 3030511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3030672-3030735:1:exon

position:3030672:1
position: 3030672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030735:1
position: 3030735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3031258-3031317:1:exon

position:3031258:1
position: 3031258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031317:1
position: 3031317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3031756-3031836:1:exon

position:3031756:1
position: 3031756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031836:1
position: 3031836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3033683-3033721:1:exon

position:3033683:1
position: 3033683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3033721:1
position: 3033721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3034796-3034858:1:exon

position:3034796:1
position: 3034796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3034858:1
position: 3034858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3035128-3035221:1:exon

position:3035128:1
position: 3035128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3035221:1
position: 3035221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3035887-3035993:1:exon

position:3035887:1
position: 3035887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3035993:1
position: 3035993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3036538-3036596:1:exon

position:3036538:1
position: 3036538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3036596:1
position: 3036596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3036809-3036950:1:exon

position:3036809:1
position: 3036809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3036950:1
position: 3036950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3037650-3037739:1:exon

position:3037650:1
position: 3037650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3037739:1
position: 3037739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3037899-3038006:1:exon

position:3037899:1
position: 3037899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3038006:1
position: 3038006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3038113-3038200:1:exon

position:3038113:1
position: 3038113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3038200:1
position: 3038200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3038775-3039121:1:exon

position:3038775:1
position: 3038775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039121:1
position: 3039121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3040665-3040889:1:exon

position:3040665:1
position: 3040665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3040889:1
position: 3040889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3041132-3041231:1:exon

position:3041132:1
position: 3041132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3041231:1
position: 3041231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3041322-3041410:1:exon

position:3041322:1
position: 3041322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3041410:1
position: 3041410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3042259-3042412:1:exon

position:3042259:1
position: 3042259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3042412:1
position: 3042412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3042553-3042620:1:exon

position:3042553:1
position: 3042553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3042620:1
position: 3042620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3043235-3043337:1:exon

position:3043235:1
position: 3043235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3043337:1
position: 3043337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3043675-3043781:1:exon

position:3043675:1
position: 3043675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3043781:1
position: 3043781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
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urn:…
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position:3044653:1
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GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: GOLGA2
product: golgin A2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169247.3
SIO_010081: GOLGA2
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:3044653-3047071:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: GOLGA2
product: golgin A2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169248.3
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:3044653-3047071:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8478
gene: GOLGA2
product: golgin A2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008169249.3
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3022161..3022400,3023634..3023756,3024132..3024212,3029687..3029821,3030468..3030511,3030672..3030735,3031258..3031317,3033683..3033721,3034796..3034858,3035128..3035221,3035887..3035993,3036538..3036596,3036809..3036950,3037650..3037739,3037899..3038006,3038113..3038200,3038775..3039121,3040098..3040211,3040665..3040889,3041132..3041231,3041322..3041410,3042259..3042412,3042553..3042620,3043235..3043337,3043675..3043781,3044368..3044539,3044653..3047071)
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urn:…
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