Chelonia mydas mitochondrion, complete genome.
type: Entry
definition: Chelonia mydas mitochondrion, complete genome.
sequence version: NC_000886.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_000886.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Chelonia mydas (Green sea turtle)
organism: Chelonia mydas
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia.
reference: 1
references: 10368956
reference: 2
references: 7476123
reference: 3
reference: 4
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from AB012104.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16497
topology: circular
so has quality: SO_0000988
location: 1..16497
location: region:1-16497:1
RO_0002162: 8469

NC_000886
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete mitochondrial DNA sequences of the green turtle and blue-tailed mole skink: statistical evidence for archosaurian affinity of turtles
author: Kumazawa, Y.
author: Nishida, M.
journal: Mol. Biol. Evol.
volume: 16
issue: 6
pages: 784-792
year: 1999
pubmed: 10368956

10368956
type: PubMed
SIO_000068: pubmed

2
title: Variations in mitochondrial tRNA gene organization of reptiles as phylogenetic markers
author: Kumazawa, Y.
author: Nishida, M.
journal: Mol. Biol. Evol.
volume: 12
issue: 5
pages: 759-772
year: 1995
pubmed: 7476123

7476123
type: PubMed
SIO_000068: pubmed

3
title: Direct Submission
journal: Submitted (08-SEP-1999) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

4
title: Direct Submission
author: Kumazawa, Y.
journal: Submitted (10-MAR-1998) Nagoya University, Earth and Planetary Sciences; Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8602, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16497:1
position: 16497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16497:1:source
so part of: sequence
organism: Chelonia mydas
organelle: mitochondrion
mol type: genomic DNA

8469
type: Taxonomy
SIO_000068: taxonomy

KEF27_t01
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t01
so part of: sequence
location: 1..73
location: region:1-73:1
so has part: feature:1-73:1:exon
subclass of: SO_0000663

64984722
type: Gene
SIO_000068: ncbigene

position:73:1
position: 73
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-73:1:exon

KEF27_t01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t01
product: tRNA-Phe
anticodon: (pos:35..37,aa:Phe,seq:gaa)
SIO_010081: KEF27_t01
subclass of: SO_0000673
so part of: KEF27_t01
location: 1..73
location: region:1-73:1
so has part: feature:1-73:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-73:1:exon

KEF27_r02
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_r02
so part of: sequence
location: 74..1042
location: region:74-1042:1
so has part: feature:74-1042:1:exon
subclass of: SO_0000573

64984732
type: Gene
SIO_000068: ncbigene

position:74:1
position: 74
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042:1
position: 1042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74-1042:1:exon

KEF27_r02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8469
locus tag: KEF27_r02
product: s-rRNA
SIO_010081: KEF27_r02
subclass of: SO_0000673
so part of: KEF27_r02
location: 74..1042
location: region:74-1042:1
so has part: feature:74-1042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74-1042:1:exon

KEF27_t02
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t02
so part of: sequence
location: 1043..1111
location: region:1043-1111:1
so has part: feature:1043-1111:1:exon
subclass of: SO_0000663

64984733
type: Gene
SIO_000068: ncbigene

position:1043:1
position: 1043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111:1
position: 1111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043-1111:1:exon

KEF27_t02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t02
product: tRNA-Val
anticodon: (pos:1074..1076,aa:Val,seq:tac)
SIO_010081: KEF27_t02
subclass of: SO_0000673
so part of: KEF27_t02
location: 1043..1111
location: region:1043-1111:1
so has part: feature:1043-1111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043-1111:1:exon

KEF27_r01
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_r01
so part of: sequence
location: 1112..2723
location: region:1112-2723:1
so has part: feature:1112-2723:1:exon
subclass of: SO_0000573

64984734
type: Gene
SIO_000068: ncbigene

position:1112:1
position: 1112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2723:1
position: 2723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112-2723:1:exon

KEF27_r01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8469
locus tag: KEF27_r01
product: l-rRNA
SIO_010081: KEF27_r01
subclass of: SO_0000673
so part of: KEF27_r01
location: 1112..2723
location: region:1112-2723:1
so has part: feature:1112-2723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112-2723:1:exon

KEF27_t03
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t03
so part of: sequence
location: 2724..2799
location: region:2724-2799:1
so has part: feature:2724-2799:1:exon
subclass of: SO_0000663

64984735
type: Gene
SIO_000068: ncbigene

position:2724:1
position: 2724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2799:1
position: 2799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2724-2799:1:exon

KEF27_t03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t03
product: tRNA-Leu
anticodon: (pos:2761..2763,aa:Leu,seq:taa)
codon recognized: UUR
SIO_010081: KEF27_t03
subclass of: SO_0000673
so part of: KEF27_t03
location: 2724..2799
location: region:2724-2799:1
so has part: feature:2724-2799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2724-2799:1:exon

KEF27_p13
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ND1
locus tag: KEF27_p13
so part of: sequence
location: 2800..3770
location: region:2800-3770:1
so has part: feature:2800-3770:1:exon
subclass of: SO_0000010

808642
type: Gene
SIO_000068: ncbigene

position:2800:1
position: 2800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3770:1
position: 3770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3770:1:exon

KEF27_p13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ND1
locus tag: KEF27_p13
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3769..3770,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MKTLLSNLMSPLMYMIPILIAVAFFTLIERKILGYMQLRKGPNIVGPHGLLQPVADGVKLFIKEPIYPSNSSITLFTMSPMLALLLALSIWLPLPLPFPLADLNLGLLFLISLSSFMVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLTLFSGGFNMQTFMTTQEPMYLMFSSWPLMMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILMMNTLTTILFLNSTYINNNPELFSMLLASKVMLLSAGFLWIRASYPRFRYDQLMHLLWKNFLPITLALCLWHISMPITFSGLPPMP
SIO_010081: KEF27_p13
subclass of: SO_0000673
so part of: KEF27_p13
location: 2800..3770
location: region:2800-3770:1
so has part: feature:2800-3770:1:exon

NP_008764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3770:1:exon

KEF27_t04
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t04
so part of: sequence
location: 3771..3839
location: region:3771-3839:1
so has part: feature:3771-3839:1:exon
subclass of: SO_0000663

64984723
type: Gene
SIO_000068: ncbigene

position:3771:1
position: 3771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3839:1
position: 3839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3771-3839:1:exon

KEF27_t04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t04
product: tRNA-Ile
anticodon: (pos:3800..3802,aa:Ile,seq:gat)
SIO_010081: KEF27_t04
subclass of: SO_0000673
so part of: KEF27_t04
location: 3771..3839
location: region:3771-3839:1
so has part: feature:3771-3839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3771-3839:1:exon

KEF27_t05
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t05
so part of: sequence
location: complement(3839..3909)
location: region:3839-3909:-1
so has part: feature:3839-3909:-1:exon
subclass of: SO_0000663

64984736
type: Gene
SIO_000068: ncbigene

position:3839:-1
position: 3839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3909:-1
position: 3909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3839-3909:-1:exon

KEF27_t05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t05
product: tRNA-Gln
anticodon: (pos:complement(3875..3877),aa:Gln,seq:ttg)
SIO_010081: KEF27_t05
subclass of: SO_0000673
so part of: KEF27_t05
location: complement(3839..3909)
location: region:3839-3909:-1
so has part: feature:3839-3909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3839-3909:-1:exon

KEF27_t06
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t06
so part of: sequence
location: 3909..3977
location: region:3909-3977:1
so has part: feature:3909-3977:1:exon
subclass of: SO_0000663

64984737
type: Gene
SIO_000068: ncbigene

position:3909:1
position: 3909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3977:1
position: 3977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909-3977:1:exon

KEF27_t06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t06
product: tRNA-Met
anticodon: (pos:3939..3941,aa:Met,seq:cat)
SIO_010081: KEF27_t06
subclass of: SO_0000673
so part of: KEF27_t06
location: 3909..3977
location: region:3909-3977:1
so has part: feature:3909-3977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3909-3977:1:exon

KEF27_p12
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ND2
locus tag: KEF27_p12
so part of: sequence
location: 3978..5016
location: region:3978-5016:1
so has part: feature:3978-5016:1:exon
subclass of: SO_0000010

808652
type: Gene
SIO_000068: ncbigene

position:3978:1
position: 3978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5016:1
position: 5016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3978-5016:1:exon

KEF27_p12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ND2
locus tag: KEF27_p12
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5016,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQWRHKNNQKPYLALLTTLSISMLPITPTLLTMP
SIO_010081: KEF27_p12
subclass of: SO_0000673
so part of: KEF27_p12
location: 3978..5016
location: region:3978-5016:1
so has part: feature:3978-5016:1:exon

NP_008765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3978-5016:1:exon

KEF27_t07
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t07
so part of: sequence
location: 5017..5092
location: region:5017-5092:1
so has part: feature:5017-5092:1:exon
subclass of: SO_0000663

64984724
type: Gene
SIO_000068: ncbigene

position:5017:1
position: 5017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092:1
position: 5092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5017-5092:1:exon

KEF27_t07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t07
product: tRNA-Trp
anticodon: (pos:5054..5056,aa:Trp,seq:tca)
SIO_010081: KEF27_t07
subclass of: SO_0000673
so part of: KEF27_t07
location: 5017..5092
location: region:5017-5092:1
so has part: feature:5017-5092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5017-5092:1:exon

KEF27_t08
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t08
so part of: sequence
location: complement(5094..5162)
location: region:5094-5162:-1
so has part: feature:5094-5162:-1:exon
subclass of: SO_0000663

64984738
type: Gene
SIO_000068: ncbigene

position:5094:-1
position: 5094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5162:-1
position: 5162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5094-5162:-1:exon

KEF27_t08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t08
product: tRNA-Ala
anticodon: (pos:complement(5130..5132),aa:Ala,seq:tgc)
SIO_010081: KEF27_t08
subclass of: SO_0000673
so part of: KEF27_t08
location: complement(5094..5162)
location: region:5094-5162:-1
so has part: feature:5094-5162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5094-5162:-1:exon

KEF27_t09
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t09
so part of: sequence
location: complement(5164..5236)
location: region:5164-5236:-1
so has part: feature:5164-5236:-1:exon
subclass of: SO_0000663

64984739
type: Gene
SIO_000068: ncbigene

position:5164:-1
position: 5164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5236:-1
position: 5236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5164-5236:-1:exon

KEF27_t09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t09
product: tRNA-Asn
anticodon: (pos:complement(5201..5203),aa:Asn,seq:gtt)
SIO_010081: KEF27_t09
subclass of: SO_0000673
so part of: KEF27_t09
location: complement(5164..5236)
location: region:5164-5236:-1
so has part: feature:5164-5236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5164-5236:-1:exon

stem_loop
type: Stem Loop
subclass of: SO_0000313
RO_0002162: 8469
note: This stem-loop structure may function as an origin for replicating the light strand of mtDNA.
so part of: sequence
location: 5239..5264
location: region:5239-5264:1
so has part: feature:5239-5264:1:region

position:5239:1
position: 5239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5264:1
position: 5264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5239-5264:1:region

KEF27_t10
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t10
so part of: sequence
location: complement(5263..5328)
location: region:5263-5328:-1
so has part: feature:5263-5328:-1:exon
subclass of: SO_0000663

64984740
type: Gene
SIO_000068: ncbigene

position:5263:-1
position: 5263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5328:-1
position: 5328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5263-5328:-1:exon

KEF27_t10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t10
product: tRNA-Cys
anticodon: (pos:complement(5298..5300),aa:Cys,seq:gca)
SIO_010081: KEF27_t10
subclass of: SO_0000673
so part of: KEF27_t10
location: complement(5263..5328)
location: region:5263-5328:-1
so has part: feature:5263-5328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5263-5328:-1:exon

KEF27_t11
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t11
so part of: sequence
location: complement(5329..5399)
location: region:5329-5399:-1
so has part: feature:5329-5399:-1:exon
subclass of: SO_0000663

64984741
type: Gene
SIO_000068: ncbigene

position:5329:-1
position: 5329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5399:-1
position: 5399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5329-5399:-1:exon

KEF27_t11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t11
product: tRNA-Tyr
anticodon: (pos:complement(5365..5367),aa:Tyr,seq:gta)
SIO_010081: KEF27_t11
subclass of: SO_0000673
so part of: KEF27_t11
location: complement(5329..5399)
location: region:5329-5399:-1
so has part: feature:5329-5399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5329-5399:-1:exon

KEF27_p11
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: COX1
locus tag: KEF27_p11
so part of: sequence
location: 5401..6948
location: region:5401-6948:1
so has part: feature:5401-6948:1:exon
subclass of: SO_0000010

808651
type: Gene
SIO_000068: ncbigene

position:5401:1
position: 5401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6948:1
position: 6948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5401-6948:1:exon

KEF27_p11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: COX1
locus tag: KEF27_p11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MILTRWFFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTAINMKSPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGMIKWDAAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFTHWFPLFTGYSLHQTWAKVHFGVMFTGVNMTFFPQHFLGLAGMPRRYSDYPDAYTLWNSISSIGSLISMVAVVMMMFIIWEAFSSKRKVALVELTTTNVEWLHGCPPPYHTYEEPAHVQTQE
SIO_010081: KEF27_p11
subclass of: SO_0000673
so part of: KEF27_p11
location: 5401..6948
location: region:5401-6948:1
so has part: feature:5401-6948:1:exon

NP_008766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5401-6948:1:exon

KEF27_t12
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t12
so part of: sequence
location: complement(6940..7010)
location: region:6940-7010:-1
so has part: feature:6940-7010:-1:exon
subclass of: SO_0000663

64984725
type: Gene
SIO_000068: ncbigene

position:6940:-1
position: 6940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7010:-1
position: 7010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6940-7010:-1:exon

KEF27_t12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t12
product: tRNA-Ser
anticodon: (pos:complement(6976..6978),aa:Ser,seq:tga)
codon recognized: UCN
SIO_010081: KEF27_t12
subclass of: SO_0000673
so part of: KEF27_t12
location: complement(6940..7010)
location: region:6940-7010:-1
so has part: feature:6940-7010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6940-7010:-1:exon

KEF27_t13
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t13
so part of: sequence
location: 7013..7082
location: region:7013-7082:1
so has part: feature:7013-7082:1:exon
subclass of: SO_0000663

64984742
type: Gene
SIO_000068: ncbigene

position:7013:1
position: 7013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7082:1
position: 7082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7013-7082:1:exon

KEF27_t13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t13
product: tRNA-Asp
anticodon: (pos:7044..7046,aa:Asp,seq:gtc)
SIO_010081: KEF27_t13
subclass of: SO_0000673
so part of: KEF27_t13
location: 7013..7082
location: region:7013-7082:1
so has part: feature:7013-7082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7013-7082:1:exon

KEF27_p10
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: COX2
locus tag: KEF27_p10
so part of: sequence
location: 7083..7769
location: region:7083-7769:1
so has part: feature:7083-7769:1:exon
subclass of: SO_0000010

808646
type: Gene
SIO_000068: ncbigene

position:7083:1
position: 7083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7769:1
position: 7769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7083-7769:1:exon

KEF27_p10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: COX2
locus tag: KEF27_p10
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPLQLGFQDAMSPIMEELLHFHDHTLMIVFLISTLVLYIITLMMTTKLTYTNTMNAQEVEMIWTILPAIVLITIALPSLRVLYLMDEINNPHLTIKAMGHQWYWTYEYTDYENLEFDSYMIPTQDLPNGHFRLLEVDHRMVMPMESPIRMLISAEDVLHSWAVPSLGVKTDAIPGRLNQATFIVTRPGVFFGQCSEICGANHSFMPIVVESVPLQHFENWSSLMLS
SIO_010081: KEF27_p10
subclass of: SO_0000673
so part of: KEF27_p10
location: 7083..7769
location: region:7083-7769:1
so has part: feature:7083-7769:1:exon

NP_008767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7083-7769:1:exon

KEF27_t14
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t14
so part of: sequence
location: 7770..7842
location: region:7770-7842:1
so has part: feature:7770-7842:1:exon
subclass of: SO_0000663

64984726
type: Gene
SIO_000068: ncbigene

position:7770:1
position: 7770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7842:1
position: 7842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7770-7842:1:exon

KEF27_t14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t14
product: tRNA-Lys
note: T at 7775 is a looped-out nucleotide in the acceptor stem, which is not present in the corresponding position for other vertebrates. This may be corrected by an RNA editing or other mechanisms.
anticodon: (pos:7803..7805,aa:Lys,seq:ttt)
SIO_010081: KEF27_t14
subclass of: SO_0000673
so part of: KEF27_t14
location: 7770..7842
location: region:7770-7842:1
so has part: feature:7770-7842:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7770-7842:1:exon

KEF27_p09
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ATP8
locus tag: KEF27_p09
so part of: sequence
location: 7844..8029
location: region:7844-8029:1
so has part: feature:7844-8029:1:exon
subclass of: SO_0000010

808645
type: Gene
SIO_000068: ncbigene

position:7844:1
position: 7844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8029:1
position: 8029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7844-8029:1:exon

KEF27_p09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ATP8
locus tag: KEF27_p09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPAPWFMILSSTWLIYTIILQPKILSHLPTNNPTNKNNKINTNSWTWPWTQHSSTNS
SIO_010081: KEF27_p09
subclass of: SO_0000673
so part of: KEF27_p09
location: 7844..8029
location: region:7844-8029:1
so has part: feature:7844-8029:1:exon

NP_008768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7844-8029:1:exon

KEF27_p08
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ATP6
locus tag: KEF27_p08
so part of: sequence
location: 7999..8681
location: region:7999-8681:1
so has part: feature:7999-8681:1:exon
subclass of: SO_0000010

808648
type: Gene
SIO_000068: ncbigene

position:7999:1
position: 7999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8681:1
position: 8681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7999-8681:1:exon

KEF27_p08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ATP6
locus tag: KEF27_p08
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8680..8681,aa:TERM)
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNPTFFDQFMSPQTLGIPLITLAMLMPPIIFPTQNTRWLTNRFSTLQSWTINLFTKQLMLPINKTGHQWSIILTSLMTMLLTINLLGLLPYTFTPTTQLSLNMGLAIPMWLATVLIGLRNQPTTSLGHLLPEGTPTPLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLTSIAVLALIPTMPTLSMLTMTILFLLTILELAVAMIQAYVFILLLSLYLQENT
SIO_010081: KEF27_p08
subclass of: SO_0000673
so part of: KEF27_p08
location: 7999..8681
location: region:7999-8681:1
so has part: feature:7999-8681:1:exon

NP_008769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7999-8681:1:exon

KEF27_p07
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: COX3
locus tag: KEF27_p07
so part of: sequence
location: 8682..9465
location: region:8682-9465:1
so has part: feature:8682-9465:1:exon
subclass of: SO_0000010

808649
type: Gene
SIO_000068: ncbigene

position:8682:1
position: 8682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9465:1
position: 9465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8682-9465:1:exon

KEF27_p07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: COX3
locus tag: KEF27_p07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9465,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQTHAYHMVDPSPWPLTGAAAALLMTSGLAMWFHYNSMLLMTLGLSIMLLTMFQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGITPLNPFEVPLLNTAVLLASGVTITWAHHSLMETNRNQTIQALTITILLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQIKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: KEF27_p07
subclass of: SO_0000673
so part of: KEF27_p07
location: 8682..9465
location: region:8682-9465:1
so has part: feature:8682-9465:1:exon

NP_008770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8682-9465:1:exon

KEF27_t15
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t15
so part of: sequence
location: 9466..9533
location: region:9466-9533:1
so has part: feature:9466-9533:1:exon
subclass of: SO_0000663

64984727
type: Gene
SIO_000068: ncbigene

position:9466:1
position: 9466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9533:1
position: 9533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9466-9533:1:exon

KEF27_t15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t15
product: tRNA-Gly
anticodon: (pos:9495..9497,aa:Gly,seq:tcc)
SIO_010081: KEF27_t15
subclass of: SO_0000673
so part of: KEF27_t15
location: 9466..9533
location: region:9466-9533:1
so has part: feature:9466-9533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9466-9533:1:exon

KEF27_p06
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ND3
locus tag: KEF27_p06
so part of: sequence
location: 9534..9883
location: region:9534-9883:1
so has part: feature:9534-9883:1:exon
subclass of: SO_0000010

808647
type: Gene
SIO_000068: ncbigene

position:9534:1
position: 9534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9883:1
position: 9883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9534-9883:1:exon

KEF27_p06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ND3
locus tag: KEF27_p06
note: TAA stop codon is completed by the addtion of 3' A residues to the mRNA; frameshift mechanism unknown
codon start: 1
transl except: (pos:9883,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNVTMSIITMALILSMLLMMLNYWLTLMKPDNEKLSPYECGFDPLESARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPSPTLTFTWTFIILLLLTLGLIYEWIQGGLEWAE
SIO_010081: KEF27_p06
subclass of: SO_0000673
so part of: KEF27_p06
location: join(9534..9707,9709..9883)
location: region:9534-9883:1
so has part: feature:9534-9707:1:exon
so has part: feature:9709-9883:1:exon

NP_008771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9534-9707:1:exon

position:9707:1
position: 9707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9709-9883:1:exon

position:9709:1
position: 9709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KEF27_t16
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t16
so part of: sequence
location: 9884..9953
location: region:9884-9953:1
so has part: feature:9884-9953:1:exon
subclass of: SO_0000663

64984728
type: Gene
SIO_000068: ncbigene

position:9884:1
position: 9884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9953:1
position: 9953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9884-9953:1:exon

KEF27_t16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t16
product: tRNA-Arg
anticodon: (pos:9915..9917,aa:Arg,seq:tcg)
SIO_010081: KEF27_t16
subclass of: SO_0000673
so part of: KEF27_t16
location: 9884..9953
location: region:9884-9953:1
so has part: feature:9884-9953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9884-9953:1:exon

KEF27_p05
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ND4L
locus tag: KEF27_p05
so part of: sequence
location: 9954..10250
location: region:9954-10250:1
so has part: feature:9954-10250:1:exon
subclass of: SO_0000010

808643
type: Gene
SIO_000068: ncbigene

position:9954:1
position: 9954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10250:1
position: 10250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9954-10250:1:exon

KEF27_p05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ND4L
locus tag: KEF27_p05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPLHFSYHSAFIISIMGLSLHRTHLISTLLCLESMMLSLFIALSMWPIQLQTSSLMLTPMLMLSFSACEAGMGLSLLVASSRTHGSDQLQNLNLLQC
SIO_010081: KEF27_p05
subclass of: SO_0000673
so part of: KEF27_p05
location: 9954..10250
location: region:9954-10250:1
so has part: feature:9954-10250:1:exon

NP_008772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9954-10250:1:exon

KEF27_p04
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ND4
locus tag: KEF27_p04
so part of: sequence
location: 10244..11624
location: region:10244-11624:1
so has part: feature:10244-11624:1:exon
subclass of: SO_0000010

808653
type: Gene
SIO_000068: ncbigene

position:10244:1
position: 10244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11624:1
position: 11624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10244-11624:1:exon

KEF27_p04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ND4
locus tag: KEF27_p04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11624,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILLPTIMLLPTITLCKPKQLWLSTLTHSLMIAILSLQWFKPSMEPTMNFSNYYLGVDQISAPLLILSCWLTPLMILASQNHLTTEPTSRKRTFIFTIILLQISLILAFSTTELIMFFITFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLIALLSLNTENGSLSMHTMQLNQPTMLNSWTHMTWWFALLMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMMLNPLSKTLSYPFMVLALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIASTLTQTQWAYTGAITLMIAHGLTSSMLFCLANTNYERTHSRTLLLARNMQLLLPLMSLWWLLASLTNMALPPTINLMGELTIIASLFNWSNITILMTGLGTLITATYTLYMLSTTQWGETPSYIKTIPPTHTREHLLMSLHTLPMILLMMKPELIWGSFH
SIO_010081: KEF27_p04
subclass of: SO_0000673
so part of: KEF27_p04
location: 10244..11624
location: region:10244-11624:1
so has part: feature:10244-11624:1:exon

NP_008773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10244-11624:1:exon

KEF27_t17
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t17
so part of: sequence
location: 11625..11694
location: region:11625-11694:1
so has part: feature:11625-11694:1:exon
subclass of: SO_0000663

64984729
type: Gene
SIO_000068: ncbigene

position:11625:1
position: 11625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11694:1
position: 11694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11625-11694:1:exon

KEF27_t17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t17
product: tRNA-His
anticodon: (pos:11656..11658,aa:His,seq:gtg)
SIO_010081: KEF27_t17
subclass of: SO_0000673
so part of: KEF27_t17
location: 11625..11694
location: region:11625-11694:1
so has part: feature:11625-11694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11625-11694:1:exon

KEF27_t18
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t18
so part of: sequence
location: 11695..11760
location: region:11695-11760:1
so has part: feature:11695-11760:1:exon
subclass of: SO_0000663

64984743
type: Gene
SIO_000068: ncbigene

position:11695:1
position: 11695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11760:1
position: 11760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11695-11760:1:exon

KEF27_t18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t18
product: tRNA-Ser
anticodon: (pos:11721..11723,aa:Ser,seq:gct)
codon recognized: AGY
SIO_010081: KEF27_t18
subclass of: SO_0000673
so part of: KEF27_t18
location: 11695..11760
location: region:11695-11760:1
so has part: feature:11695-11760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11695-11760:1:exon

KEF27_t19
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t19
so part of: sequence
location: 11760..11831
location: region:11760-11831:1
so has part: feature:11760-11831:1:exon
subclass of: SO_0000663

64984744
type: Gene
SIO_000068: ncbigene

position:11831:1
position: 11831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11760-11831:1:exon

KEF27_t19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t19
product: tRNA-Leu
anticodon: (pos:11792..11794,aa:Leu,seq:tag)
codon recognized: CUN
SIO_010081: KEF27_t19
subclass of: SO_0000673
so part of: KEF27_t19
location: 11760..11831
location: region:11760-11831:1
so has part: feature:11760-11831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11760-11831:1:exon

KEF27_p03
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ND5
locus tag: KEF27_p03
so part of: sequence
location: 11832..13637
location: region:11832-13637:1
so has part: feature:11832-13637:1:exon
subclass of: SO_0000010

808654
type: Gene
SIO_000068: ncbigene

position:11832:1
position: 11832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13637:1
position: 13637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11832-13637:1:exon

KEF27_p03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ND5
locus tag: KEF27_p03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MTLLMNSTFLLALITLTLPLTMTAYPNKTWTPMKTKTAVKMAFLITLIPLSIFTYTDIESIITNLHWSTTSTFTMNMSFKLDQYSIMFVPIALYVTWSILEFTHWYMATDPHITKFFKYLLTFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWHGRTEANSSALQAIIYNRMGDIGLILSMSWLSMNLNTWELQQIFTHTNSTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRMHPILTTNNTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSMPITSSCLTIGSMALTGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATSFTAIYSLRILIFVQTGHPRYPSTLLLNENNPTIINPITRLAMGSIIAGLLISLNTTPLKTPPTTMPTYIKIAALTVTMLGLLMALELTMMMNKTTQKPSNTHNFSNSLAYFNTLTHRSLPMTNLKFSQNISTHLIDLSWYENIGPKGLSKLQITPITITSSSQKGLIKIYMTSFIMSMTLLLLTI
SIO_010081: KEF27_p03
subclass of: SO_0000673
so part of: KEF27_p03
location: 11832..13637
location: region:11832-13637:1
so has part: feature:11832-13637:1:exon

NP_008774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11832-13637:1:exon

KEF27_p02
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: ND6
locus tag: KEF27_p02
so part of: sequence
location: complement(13633..14157)
location: region:13633-14157:-1
so has part: feature:13633-14157:-1:exon
subclass of: SO_0000010

808650
type: Gene
SIO_000068: ncbigene

position:13633:-1
position: 13633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14157:-1
position: 14157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13633-14157:-1:exon

KEF27_p02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: ND6
locus tag: KEF27_p02
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMYFAFLFGFCFVFWMVGVSCNPSPYYGVLSLVLGAAFGCGLLVSMGGSFVSVVLFLIYLGGMLVIFAYSSALVEEPYPVAWGSQGGVVYVVSYVLVVLVYGMMCYWLWSMEGYGSVTVDAGGLFVVRLDFSGVAWFYYFGSWLFLIAGWGLLLTLFVVMELVRGLSRGVIRPI
SIO_010081: KEF27_p02
subclass of: SO_0000673
so part of: KEF27_p02
location: complement(13633..14157)
location: region:13633-14157:-1
so has part: feature:13633-14157:-1:exon

NP_008775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13633-14157:-1:exon

KEF27_t20
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t20
so part of: sequence
location: complement(14158..14225)
location: region:14158-14225:-1
so has part: feature:14158-14225:-1:exon
subclass of: SO_0000663

64984730
type: Gene
SIO_000068: ncbigene

position:14158:-1
position: 14158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14225:-1
position: 14225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14158-14225:-1:exon

KEF27_t20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t20
product: tRNA-Glu
anticodon: (pos:complement(14194..14196),aa:Glu,seq:ttc)
SIO_010081: KEF27_t20
subclass of: SO_0000673
so part of: KEF27_t20
location: complement(14158..14225)
location: region:14158-14225:-1
so has part: feature:14158-14225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14158-14225:-1:exon

KEF27_p01
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
gene: CYTB
locus tag: KEF27_p01
so part of: sequence
location: 14229..15372
location: region:14229-15372:1
so has part: feature:14229-15372:1:exon
subclass of: SO_0000010

808644
type: Gene
SIO_000068: ncbigene

position:14229:1
position: 14229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15372:1
position: 15372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14229-15372:1:exon

KEF27_p01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8469
gene: CYTB
locus tag: KEF27_p01
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15372,aa:TERM)
transl table: 2
product: cytochrome b
translation: MATNLRKTHPMMKIINNLVIDLPSPSNISAWWNFGSLLATCLALQIITGIFLAMHYSPDISMAFSSIAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGIILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATLTRFFTFHFLLPFAITGLTAVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLTFLLTLTLFSPYLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILFLMPTLHTSKQRTASFRPLTQILFWSLVADLLVLTWIGGQPVEDPFIIIGQVASTFYFLILLLLMPAAGMIENKMLNLK
SIO_010081: KEF27_p01
subclass of: SO_0000673
so part of: KEF27_p01
location: 14229..15372
location: region:14229-15372:1
so has part: feature:14229-15372:1:exon

NP_008776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14229-15372:1:exon

KEF27_t21
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t21
so part of: sequence
location: 15373..15443
location: region:15373-15443:1
so has part: feature:15373-15443:1:exon
subclass of: SO_0000663

64984731
type: Gene
SIO_000068: ncbigene

position:15373:1
position: 15373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15443:1
position: 15443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15373-15443:1:exon

KEF27_t21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t21
product: tRNA-Thr
anticodon: (pos:15405..15407,aa:Thr,seq:tgt)
SIO_010081: KEF27_t21
subclass of: SO_0000673
so part of: KEF27_t21
location: 15373..15443
location: region:15373-15443:1
so has part: feature:15373-15443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15373-15443:1:exon

KEF27_t22
type: Gene
subclass of: SO_0000704
RO_0002162: 8469
locus tag: KEF27_t22
so part of: sequence
location: complement(15445..15515)
location: region:15445-15515:-1
so has part: feature:15445-15515:-1:exon
subclass of: SO_0000663

64984745
type: Gene
SIO_000068: ncbigene

position:15445:-1
position: 15445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15515:-1
position: 15515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15445-15515:-1:exon

KEF27_t22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8469
locus tag: KEF27_t22
product: tRNA-Pro
anticodon: (pos:complement(15481..15483),aa:Pro,seq:tgg)
SIO_010081: KEF27_t22
subclass of: SO_0000673
so part of: KEF27_t22
location: complement(15445..15515)
location: region:15445-15515:-1
so has part: feature:15445-15515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15445-15515:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 8469
note: control region
so part of: sequence
location: 15516..16497
location: region:15516-16497:1
so has part: feature:15516-16497:1:region

position:15516:1
position: 15516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15516-16497:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 8469
note: putative
rpt family: CSB-1
so part of: sequence
location: 16156..16179
location: region:16156-16179:1
so has part: feature:16156-16179:1:region

position:16156:1
position: 16156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16179:1
position: 16179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16156-16179:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 8469
note: putative
rpt family: CSB-2
so part of: sequence
location: 16245..16260
location: region:16245-16260:1
so has part: feature:16245-16260:1:region

position:16245:1
position: 16245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16260:1
position: 16260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16245-16260:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 8469
note: putative
rpt family: CSB-3
so part of: sequence
location: 16300..16317
location: region:16300-16317:1
so has part: feature:16300-16317:1:region

position:16300:1
position: 16300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16317:1
position: 16317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16300-16317:1:region