Caretta caretta mitochondrion, complete genome.
type: Entry
definition: Caretta caretta mitochondrion, complete genome.
sequence version: NC_016923.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_016923.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
keyword: complete genome
source: mitochondrion Caretta caretta (Loggerhead turtle)
organism: Caretta caretta
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta.
reference: 1
references: 22295859
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to FR694649.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16737
topology: circular
so has quality: SO_0000988
location: 1..16737
location: region:1-16737:1
RO_0002162: 8467

NC_016923
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete mitochondrial genome of the loggerhead turtle Caretta caretta (Testudines: Cheloniidae): Genome description and phylogenetic considerations
author: Drosopoulou, E.
author: Tsiamis, G.
author: Mavropoulou, M.
author: Vittas, S.
author: Katselidis, K.A.
author: Schofield, G.
author: Palaiologou, D.
author: Sartsidis, T.
author: Bourtzis, K.
author: Pantis, J.
author: Scouras, Z.G.
journal: Mitochondrial DNA
volume: 23
issue: 1
pages: 1-12
year: 2012
pubmed: 22295859

22295859
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (22-FEB-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Drosopoulou, E.
journal: Submitted (29-SEP-2010) Dept. Genetics, Dev. and Molecular Biol., Aristotle University of Thessaloniki, School of Biology, University Campus, Thessaloniki GR-54124, Greece

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16737:1
position: 16737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16737:1:source
so part of: sequence
organism: Caretta caretta
organelle: mitochondrion
mol type: genomic DNA
tissue type: blood
country: Greece:Ionion

8467
type: Taxonomy
SIO_000068: taxonomy

trnF
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnF
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon
subclass of: SO_0000663

11747772
type: Gene
SIO_000068: ncbigene

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

trnF
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnF
product: tRNA-Phe
SIO_010081: trnF
subclass of: SO_0000673
so part of: trnF
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8467
product: 12S ribosomal RNA
so part of: sequence
location: 70..1039
location: region:70-1039:1
so has part: feature:70-1039:1:region

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039:1
position: 1039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1039:1:region

trnV
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnV
so part of: sequence
location: 1040..1108
location: region:1040-1108:1
so has part: feature:1040-1108:1:exon
subclass of: SO_0000663

11747773
type: Gene
SIO_000068: ncbigene

position:1040:1
position: 1040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108:1
position: 1108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1040-1108:1:exon

trnV
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnV
product: tRNA-Val
SIO_010081: trnV
subclass of: SO_0000673
so part of: trnV
location: 1040..1108
location: region:1040-1108:1
so has part: feature:1040-1108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1040-1108:1:exon

16SrRNA
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: 16SrRNA
so part of: sequence
location: 1109..2719
location: region:1109-2719:1
so has part: feature:1109-2719:1:exon
subclass of: SO_0000573

11747774
type: Gene
SIO_000068: ncbigene

position:1109:1
position: 1109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2719:1
position: 2719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109-2719:1:exon

16SrRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8467
gene: 16SrRNA
product: 16S ribosomal RNA
SIO_010081: 16SrRNA
subclass of: SO_0000673
so part of: 16SrRNA
location: 1109..2719
location: region:1109-2719:1
so has part: feature:1109-2719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109-2719:1:exon

trnL(UUR)
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnL(UUR)
so part of: sequence
location: 2720..2795
location: region:2720-2795:1
so has part: feature:2720-2795:1:exon
subclass of: SO_0000663

11747775
type: Gene
SIO_000068: ncbigene

position:2720:1
position: 2720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795:1
position: 2795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2720-2795:1:exon

trnL(UUR)
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnL(UUR)
product: tRNA-Leu
codon recognized: UUR
SIO_010081: trnL(UUR)
subclass of: SO_0000673
so part of: trnL(UUR)
location: 2720..2795
location: region:2720-2795:1
so has part: feature:2720-2795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2720-2795:1:exon

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ND1
so part of: sequence
location: 2796..3762
location: region:2796-3762:1
so has part: feature:2796-3762:1:exon
subclass of: SO_0000010

11747776
type: Gene
SIO_000068: ncbigene

position:2796:1
position: 2796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762:1
position: 3762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2796-3762:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ND1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3762,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MKTLLSNLMSPLMYMVPILIAVAFFTLIERKILGYMQLRKGPNIVGPYGLLQPVADGVKLFIKEPIYPSNSSIMLFTMSPMLALLLALSIWLPLPLPFPLADLNLGLLFLISMSSFMVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLTLFSGGFNMQTFMTTQEPMYLMFSSWPLMMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILMMNTLTTILFLNSTYTNNPELFSVLLMSKVMLLSGGFLWIRASYPRFRYDQLMHLLWKNFLPITLALCLWHTSMPITFSGLPPMP
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2796..3762
location: region:2796-3762:1
so has part: feature:2796-3762:1:exon

YP_005296176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2796-3762:1:exon

trnI
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnI
so part of: sequence
location: 3764..3832
location: region:3764-3832:1
so has part: feature:3764-3832:1:exon
subclass of: SO_0000663

11747777
type: Gene
SIO_000068: ncbigene

position:3764:1
position: 3764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3832:1
position: 3832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3764-3832:1:exon

trnI
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnI
product: tRNA-Ile
SIO_010081: trnI
subclass of: SO_0000673
so part of: trnI
location: 3764..3832
location: region:3764-3832:1
so has part: feature:3764-3832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3764-3832:1:exon

trnQ
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnQ
so part of: sequence
location: complement(3832..3902)
location: region:3832-3902:-1
so has part: feature:3832-3902:-1:exon
subclass of: SO_0000663

11747778
type: Gene
SIO_000068: ncbigene

position:3832:-1
position: 3832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3902:-1
position: 3902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3832-3902:-1:exon

trnQ
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnQ
product: tRNA-Gln
SIO_010081: trnQ
subclass of: SO_0000673
so part of: trnQ
location: complement(3832..3902)
location: region:3832-3902:-1
so has part: feature:3832-3902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3832-3902:-1:exon

trnM
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnM
so part of: sequence
location: 3902..3970
location: region:3902-3970:1
so has part: feature:3902-3970:1:exon
subclass of: SO_0000663

11747779
type: Gene
SIO_000068: ncbigene

position:3902:1
position: 3902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3970:1
position: 3970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3902-3970:1:exon

trnM
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnM
product: tRNA-Met
SIO_010081: trnM
subclass of: SO_0000673
so part of: trnM
location: 3902..3970
location: region:3902-3970:1
so has part: feature:3902-3970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3902-3970:1:exon

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ND2
so part of: sequence
location: 3971..5012
location: region:3971-5012:1
so has part: feature:3971-5012:1:exon
subclass of: SO_0000010

11747771
type: Gene
SIO_000068: ncbigene

position:3971:1
position: 3971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5012:1
position: 5012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3971-5012:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5012,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYANTIIISSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRATEAATKYFLTQATASTLILFSSIINAWTLGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTMTALILATWQKLAPLSLLTMTAQSLNTPLLLMLGLTSALIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYTIMTSTMFLMMKLLKTNKISMMMTSWTKLPTMNTLMMLTLMSLAGMPPLTGFMPKWLILQELTKQHMLIMATMMAMLSLLTLFFYLRISYYATITLPPNSTNYSQQWRHKMNQKPPYLALLTTLSTIMLPIMPTLLTIP
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 3971..5012
location: region:3971-5012:1
so has part: feature:3971-5012:1:exon

YP_005296177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3971-5012:1:exon

trnW
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnW
so part of: sequence
location: 5013..5089
location: region:5013-5089:1
so has part: feature:5013-5089:1:exon
subclass of: SO_0000663

11747802
type: Gene
SIO_000068: ncbigene

position:5013:1
position: 5013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5089:1
position: 5089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5013-5089:1:exon

trnW
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnW
product: tRNA-Trp
SIO_010081: trnW
subclass of: SO_0000673
so part of: trnW
location: 5013..5089
location: region:5013-5089:1
so has part: feature:5013-5089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5013-5089:1:exon

trnA
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnA
so part of: sequence
location: complement(5091..5159)
location: region:5091-5159:-1
so has part: feature:5091-5159:-1:exon
subclass of: SO_0000663

11747806
type: Gene
SIO_000068: ncbigene

position:5091:-1
position: 5091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5159:-1
position: 5159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5091-5159:-1:exon

trnA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnA
product: tRNA-Ala
SIO_010081: trnA
subclass of: SO_0000673
so part of: trnA
location: complement(5091..5159)
location: region:5091-5159:-1
so has part: feature:5091-5159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5091-5159:-1:exon

trnN
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnN
so part of: sequence
location: complement(5161..5233)
location: region:5161-5233:-1
so has part: feature:5161-5233:-1:exon
subclass of: SO_0000663

11747780
type: Gene
SIO_000068: ncbigene

position:5161:-1
position: 5161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5233:-1
position: 5233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5161-5233:-1:exon

trnN
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnN
product: tRNA-Asn
SIO_010081: trnN
subclass of: SO_0000673
so part of: trnN
location: complement(5161..5233)
location: region:5161-5233:-1
so has part: feature:5161-5233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5161-5233:-1:exon

trnC
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnC
so part of: sequence
location: complement(5260..5325)
location: region:5260-5325:-1
so has part: feature:5260-5325:-1:exon
subclass of: SO_0000663

11747799
type: Gene
SIO_000068: ncbigene

position:5260:-1
position: 5260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5325:-1
position: 5325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5260-5325:-1:exon

trnC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnC
product: tRNA-Cys
SIO_010081: trnC
subclass of: SO_0000673
so part of: trnC
location: complement(5260..5325)
location: region:5260-5325:-1
so has part: feature:5260-5325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5260-5325:-1:exon

trnY
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnY
so part of: sequence
location: complement(5326..5396)
location: region:5326-5396:-1
so has part: feature:5326-5396:-1:exon
subclass of: SO_0000663

11747785
type: Gene
SIO_000068: ncbigene

position:5326:-1
position: 5326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5396:-1
position: 5396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5326-5396:-1:exon

trnY
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnY
product: tRNA-Tyr
SIO_010081: trnY
subclass of: SO_0000673
so part of: trnY
location: complement(5326..5396)
location: region:5326-5396:-1
so has part: feature:5326-5396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5326-5396:-1:exon

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: COX1
so part of: sequence
location: 5398..6945
location: region:5398-6945:1
so has part: feature:5398-6945:1:exon
subclass of: SO_0000010

11747797
type: Gene
SIO_000068: ncbigene

position:5398:1
position: 5398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6945:1
position: 6945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5398-6945:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MFLTRWFFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTAINMKSPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGMIKWDAAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFTHWFPLFTGYSLHQTWTKVHFGVMFTGVNMTFFPQHFLGLAGMPRRYSDYPDAYTLWNSISSIGSLISMVAVVMMMFIIWEAFSSKRKVSTVELTTTNVEWLHGCPPPYHTYEEPAHVQTQE
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5398..6945
location: region:5398-6945:1
so has part: feature:5398-6945:1:exon

YP_005296178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5398-6945:1:exon

trnS(UCN)
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnS(UCN)
so part of: sequence
location: complement(6937..7007)
location: region:6937-7007:-1
so has part: feature:6937-7007:-1:exon
subclass of: SO_0000663

11747795
type: Gene
SIO_000068: ncbigene

position:6937:-1
position: 6937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7007:-1
position: 7007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6937-7007:-1:exon

trnS(UCN)
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnS(UCN)
product: tRNA-Ser
codon recognized: UCN
SIO_010081: trnS(UCN)
subclass of: SO_0000673
so part of: trnS(UCN)
location: complement(6937..7007)
location: region:6937-7007:-1
so has part: feature:6937-7007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6937-7007:-1:exon

trnD
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnD
so part of: sequence
location: 7010..7079
location: region:7010-7079:1
so has part: feature:7010-7079:1:exon
subclass of: SO_0000663

11747801
type: Gene
SIO_000068: ncbigene

position:7010:1
position: 7010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7079:1
position: 7079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7010-7079:1:exon

trnD
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnD
product: tRNA-Asp
SIO_010081: trnD
subclass of: SO_0000673
so part of: trnD
location: 7010..7079
location: region:7010-7079:1
so has part: feature:7010-7079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7010-7079:1:exon

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: COX2
so part of: sequence
location: 7080..7766
location: region:7080-7766:1
so has part: feature:7080-7766:1:exon
subclass of: SO_0000010

11747786
type: Gene
SIO_000068: ncbigene

position:7080:1
position: 7080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7766:1
position: 7766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7080-7766:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: COX2
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPLQLGFQDAMSPIMEELLHFHDHTLMIVFLISTLVLYIITLMMTTKLTYTNTMNAQEVEMIWTILPAIVLITIALPSLRVLYLMDEINNPHLTIKAMGHQWYWTYEYTDYENLEFDSYMIPTQDLPNGHFRLLEVDHRMVMPMESPIRMLISAEDVLHSWAVPSLGVKTDAIPGRLNQATFIITRPGVFFGQCSEICGANHSFMPIVVESVPLSHFEDWSSLMLS
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7080..7766
location: region:7080-7766:1
so has part: feature:7080-7766:1:exon

YP_005296179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7080-7766:1:exon

trnK
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnK
so part of: sequence
location: 7767..7839
location: region:7767-7839:1
so has part: feature:7767-7839:1:exon
subclass of: SO_0000663

11747804
type: Gene
SIO_000068: ncbigene

position:7767:1
position: 7767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7839:1
position: 7839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7767-7839:1:exon

trnK
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnK
product: tRNA-Lys
SIO_010081: trnK
subclass of: SO_0000673
so part of: trnK
location: 7767..7839
location: region:7767-7839:1
so has part: feature:7767-7839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7767-7839:1:exon

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ATP8
so part of: sequence
location: 7841..8005
location: region:7841-8005:1
so has part: feature:7841-8005:1:exon
subclass of: SO_0000010

11747790
type: Gene
SIO_000068: ncbigene

position:7841:1
position: 7841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8005:1
position: 8005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7841-8005:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPNPWLMILLSAWLIYTIILQPKISSYLPTNNPTNKNNKTNTNPWTWPWT
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7841..8005
location: region:7841-8005:1
so has part: feature:7841-8005:1:exon

YP_005296180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7841-8005:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ATP6
so part of: sequence
location: 7996..8677
location: region:7996-8677:1
so has part: feature:7996-8677:1:exon
subclass of: SO_0000010

11747792
type: Gene
SIO_000068: ncbigene

position:7996:1
position: 7996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8677:1
position: 8677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7996-8677:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ATP6
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8677,aa:TERM)
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNLTFFDQFMSPQILGIPLTTLALLMPSTLFPTQNTRWLTNRLSTLQSWTINSFTKQLMLPINKTGHQWSIILTSLMTMLLMINLLGLLPYTFTPTTQLSLNMGLAIPMWLATVLTGLRNQPTTSLGHLLPEGTPILLTPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLTSTAVLTLLPMMPTLSLLTMVILLLLTILELAVAMIQAYVFVLLLSLYLQENT
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 7996..8677
location: region:7996-8677:1
so has part: feature:7996-8677:1:exon

YP_005296181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7996-8677:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: COX3
so part of: sequence
location: 8679..9462
location: region:8679-9462:1
so has part: feature:8679-9462:1:exon
subclass of: SO_0000010

11747794
type: Gene
SIO_000068: ncbigene

position:8679:1
position: 8679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9462:1
position: 9462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8679-9462:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9462,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQMHAYHMVDPSPWPLTGAAAALLMTSGLATWFHYNSTLLMTLGLLTMLLTMFQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGITPLNPFEVPLLNTAVLLASGVTITWAHHSLMEMNRNQTTQALTITILLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQIKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8679..9462
location: region:8679-9462:1
so has part: feature:8679-9462:1:exon

YP_005296182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8679-9462:1:exon

trnG
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnG
so part of: sequence
location: 9463..9530
location: region:9463-9530:1
so has part: feature:9463-9530:1:exon
subclass of: SO_0000663

11747805
type: Gene
SIO_000068: ncbigene

position:9463:1
position: 9463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9530:1
position: 9530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9463-9530:1:exon

trnG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnG
product: tRNA-Gly
SIO_010081: trnG
subclass of: SO_0000673
so part of: trnG
location: 9463..9530
location: region:9463-9530:1
so has part: feature:9463-9530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9463-9530:1:exon

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ND3
so part of: sequence
location: 9531..9880
location: region:9531-9880:1
so has part: feature:9531-9880:1:exon
subclass of: SO_0000010

11747798
type: Gene
SIO_000068: ncbigene

position:9531:1
position: 9531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9880:1
position: 9880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9531-9880:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ND3
note: frameshift mechanism unknown (Mindell et al., 1998, Mol. Biol. Evol., 15:1568-1571); TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9880,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNVTTSIITMASILSMILMMLNYQLTLTKPDNEKLSPYECGFDPLESARLPFSIRFFLSAILFLLFDLEIALLLPLPWATQLPSPTSTLTWTIIILLLLTLGLIYEWIQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: join(9531..9707,9709..9880)
location: region:9531-9880:1
so has part: feature:9531-9707:1:exon
so has part: feature:9709-9880:1:exon

YP_005296183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9531-9707:1:exon

position:9707:1
position: 9707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9709-9880:1:exon

position:9709:1
position: 9709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnR
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnR
so part of: sequence
location: 9881..9950
location: region:9881-9950:1
so has part: feature:9881-9950:1:exon
subclass of: SO_0000663

11747803
type: Gene
SIO_000068: ncbigene

position:9881:1
position: 9881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9950:1
position: 9950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9881-9950:1:exon

trnR
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnR
product: tRNA-Arg
SIO_010081: trnR
subclass of: SO_0000673
so part of: trnR
location: 9881..9950
location: region:9881-9950:1
so has part: feature:9881-9950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9881-9950:1:exon

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ND4L
so part of: sequence
location: 9951..10247
location: region:9951-10247:1
so has part: feature:9951-10247:1:exon
subclass of: SO_0000010

11747793
type: Gene
SIO_000068: ncbigene

position:9951:1
position: 9951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10247:1
position: 10247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9951-10247:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPLHFSYHSAFIISIMGLSLHRTHLISTLLCLESMMLSLFIALAMWPTQLQTPSLMITPMLMLSFSACEAGMGLSLLVASSRTHGSDQLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9951..10247
location: region:9951-10247:1
so has part: feature:9951-10247:1:exon

YP_005296184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9951-10247:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ND4
so part of: sequence
location: 10241..11621
location: region:10241-11621:1
so has part: feature:10241-11621:1:exon
subclass of: SO_0000010

11747783
type: Gene
SIO_000068: ncbigene

position:10241:1
position: 10241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11621:1
position: 11621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10241-11621:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11621,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILLPTIMLLPTITLCKPKQLWPSTLIHSLTIATLSLQWFKPSMEPTMNFSNSYLGMDQTSAPLLILSCWLTPMMILASQNHLATEPTSRKRTFTFTIISLQISLMLAFSTMELIMFFIAFETTLIPTLMIITRWGNQMERLNAGTYFLFYTLIGSLPLLIALLSLNTENGSSSMYTMQLNQPIMPNSWTHTTWWFALLMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMMLNPLSKTLSYPFMVLALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWAYTGAITLMIAHGLTSSMLFCLANTNYERTHSRTLLLARNMQLLLPLMSLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTLITATYTLYMLSTTQWGETPSYIKTIPPTHTREHLLMSLHILPMILLMTKPELIWGSFY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10241..11621
location: region:10241-11621:1
so has part: feature:10241-11621:1:exon

YP_005296185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10241-11621:1:exon

trnH
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnH
so part of: sequence
location: 11622..11691
location: region:11622-11691:1
so has part: feature:11622-11691:1:exon
subclass of: SO_0000663

11747800
type: Gene
SIO_000068: ncbigene

position:11622:1
position: 11622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11691:1
position: 11691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11622-11691:1:exon

trnH
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnH
product: tRNA-His
SIO_010081: trnH
subclass of: SO_0000673
so part of: trnH
location: 11622..11691
location: region:11622-11691:1
so has part: feature:11622-11691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11622-11691:1:exon

trnS(AGY)
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnS(AGY)
so part of: sequence
location: 11692..11757
location: region:11692-11757:1
so has part: feature:11692-11757:1:exon
subclass of: SO_0000663

11747782
type: Gene
SIO_000068: ncbigene

position:11692:1
position: 11692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11757:1
position: 11757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11692-11757:1:exon

trnS(AGY)
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnS(AGY)
product: tRNA-Ser
codon recognized: AGY
SIO_010081: trnS(AGY)
subclass of: SO_0000673
so part of: trnS(AGY)
location: 11692..11757
location: region:11692-11757:1
so has part: feature:11692-11757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11692-11757:1:exon

trnL(CUN)
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnL(CUN)
so part of: sequence
location: 11757..11828
location: region:11757-11828:1
so has part: feature:11757-11828:1:exon
subclass of: SO_0000663

11747781
type: Gene
SIO_000068: ncbigene

position:11828:1
position: 11828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11757-11828:1:exon

trnL(CUN)
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnL(CUN)
product: tRNA-Leu
codon recognized: CUN
SIO_010081: trnL(CUN)
subclass of: SO_0000673
so part of: trnL(CUN)
location: 11757..11828
location: region:11757-11828:1
so has part: feature:11757-11828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11757-11828:1:exon

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ND5
so part of: sequence
location: 11829..13625
location: region:11829-13625:1
so has part: feature:11829-13625:1:exon
subclass of: SO_0000010

11747784
type: Gene
SIO_000068: ncbigene

position:11829:1
position: 11829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13625:1
position: 13625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11829-13625:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MTTLMNSTFLLALITLMFPLTTTYPKTWTPLKTKTAVKMAFFITLIPLIAFIYTDIESVITNLHWSTTSTFTMNMSFKLDKYSIMFVPIALYVTWSILEFTHWYMATDPYITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWSGRTEANSSALQAIIYNRIGDIGLILSMAWLSMNLNTWELQQIFTHTNLTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVIAGIFLLIRMHPILTTNNTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALTGMPFMTGFYSKDIIIETMNTSYMNAWALLLTLTATSFTAIYSFRILIFVQTGHPRYPSTLLLNENNPTIINPITRLAMGSIVAGLLISLNITPLKTPPTTMPTYIKITALTVTILGLLLALELITMVNKTQKPSNTHNFSNSLAYFNTLMHRSLPMVNLKFSQNIATHLIDQSWYENVGPKGLSKSQITPITTSSASQKGLIKIYMTSFILSMTLLLLIT
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11829..13625
location: region:11829-13625:1
so has part: feature:11829-13625:1:exon

YP_005296186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11829-13625:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: ND6
so part of: sequence
location: complement(13621..14145)
location: region:13621-14145:-1
so has part: feature:13621-14145:-1:exon
subclass of: SO_0000010

11747796
type: Gene
SIO_000068: ncbigene

position:13621:-1
position: 13621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14145:-1
position: 14145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13621-14145:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMYFAFLFGFCFVFWMVGVSCNPSPYYGVLSLVLGAAFGCGLLVSMGGSFVSVVLFLIYLGGMLVIFAYSSALVEEPYPVAWGNRGGMIYVVSYILVLVGYGAMCYWLWSMEGYGSVTIDAGGLFVVRLDFSGVAWFYYFGSWLFLIAGWGLLLTLFVVMELVRGLSRGVLRPI
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13621..14145)
location: region:13621-14145:-1
so has part: feature:13621-14145:-1:exon

YP_005296187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13621-14145:-1:exon

trnE
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnE
so part of: sequence
location: complement(14146..14213)
location: region:14146-14213:-1
so has part: feature:14146-14213:-1:exon
subclass of: SO_0000663

11747787
type: Gene
SIO_000068: ncbigene

position:14146:-1
position: 14146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14213:-1
position: 14213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14146-14213:-1:exon

trnE
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnE
product: tRNA-Glu
SIO_010081: trnE
subclass of: SO_0000673
so part of: trnE
location: complement(14146..14213)
location: region:14146-14213:-1
so has part: feature:14146-14213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14146-14213:-1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: CYTB
so part of: sequence
location: 14217..15360
location: region:14217-15360:1
so has part: feature:14217-15360:1:exon
subclass of: SO_0000010

11747791
type: Gene
SIO_000068: ncbigene

position:14217:1
position: 14217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15360:1
position: 15360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14217-15360:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8467
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15360,aa:TERM)
transl table: 2
product: cytochrome b
translation: MATNLRKTHPMMKIINNSLIDLPSPSNISAWWNFGSLLATCLALQIITGIFLAMHYSPDISMAFSSITHITRDVQYGWLIRNMHANGASLFFICIYLHIGRGIYYGSYLYKETWNTGIILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATLTRFFTLHFLLPFAITGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLTFLLTLTLFSPYLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLLLMPTLHTSKQRTASFRPLTQILFWSLVADLLVLTWIGGQPVEDPFITIGQMASSLYFLILLLLMPTAGMIENKMLKLK
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14217..15360
location: region:14217-15360:1
so has part: feature:14217-15360:1:exon

YP_005296188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14217-15360:1:exon

trnT
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnT
so part of: sequence
location: 15361..15431
location: region:15361-15431:1
so has part: feature:15361-15431:1:exon
subclass of: SO_0000663

11747789
type: Gene
SIO_000068: ncbigene

position:15361:1
position: 15361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15431:1
position: 15431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15361-15431:1:exon

trnT
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnT
product: tRNA-Thr
SIO_010081: trnT
subclass of: SO_0000673
so part of: trnT
location: 15361..15431
location: region:15361-15431:1
so has part: feature:15361-15431:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15361-15431:1:exon

trnP
type: Gene
subclass of: SO_0000704
RO_0002162: 8467
gene: trnP
so part of: sequence
location: complement(15433..15503)
location: region:15433-15503:-1
so has part: feature:15433-15503:-1:exon
subclass of: SO_0000663

11747788
type: Gene
SIO_000068: ncbigene

position:15433:-1
position: 15433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15503:-1
position: 15503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15433-15503:-1:exon

trnP
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8467
gene: trnP
product: tRNA-Pro
SIO_010081: trnP
subclass of: SO_0000673
so part of: trnP
location: complement(15433..15503)
location: region:15433-15503:-1
so has part: feature:15433-15503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15433-15503:-1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 8467
so part of: sequence
location: 15504..16737
location: region:15504-16737:1
so has part: feature:15504-16737:1:region

position:15504:1
position: 15504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15504-16737:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 8467
note: Number of repeat units varies among individuals
rpt type: TANDEM
rpt unit seq: tatat
so part of: sequence
location: 16434..>16633
location: region:16434-16633:1
so has part: feature:16434-16633:1:region

position:16434:1
position: 16434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16633:1
position: 16633
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16434-16633:1:region

gap
type: Gap
subclass of: SO_0000730
RO_0002162: 8467
estimated length: unknown
so part of: sequence
location: 16634..16733
location: region:16634-16733:1
so has part: feature:16634-16733:1:region

position:16634:1
position: 16634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16733:1
position: 16733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16634-16733:1:region