Labeo rohita mitochondrion, complete genome.
type: Entry
definition: Labeo rohita mitochondrion, complete genome.
sequence version: NC_017608.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_017608.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Labeo rohita (rohu)
organism: Labeo rohita
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to JQ231111.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16626
topology: circular
so has quality: SO_0000988
location: 1..16626
location: region:1-16626:1
RO_0002162: 84645

NC_017608
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete nucleotide sequence and gene organization of Labeo rohta mitochondrial genome
author: Ravinder, K.
author: Majumdar, K.C.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (11-APR-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Ravinder, K.
author: Majumdar, K.C.
journal: Submitted (01-DEC-2011) Aquaculture, Centre for Cellular and Molecular Biology, Uppal Road, Uppal, Hyderabad, Andhra Pradesh 500007, India

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16626:1
position: 16626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16626:1:source
so part of: sequence
organism: Labeo rohita
organelle: mitochondrion
mol type: genomic DNA

84645
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Phe
so part of: sequence
location: 954..1022
location: region:954-1022:1
so has part: feature:954-1022:1:region

position:954:1
position: 954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022:1
position: 1022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954-1022:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 84645
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 1023..1979
location: region:1023-1979:1
so has part: feature:1023-1979:1:region

position:1023:1
position: 1023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1979:1
position: 1979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023-1979:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Val
so part of: sequence
location: 1980..2051
location: region:1980-2051:1
so has part: feature:1980-2051:1:region

position:1980:1
position: 1980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051:1
position: 2051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1980-2051:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 84645
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 2052..3740
location: region:2052-3740:1
so has part: feature:2052-3740:1:region

position:2052:1
position: 2052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3740:1
position: 3740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2052-3740:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 3741..3818
location: region:3741-3818:1
so has part: feature:3741-3818:1:region

position:3741:1
position: 3741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3818:1
position: 3818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3741-3818:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ND1
so part of: sequence
location: 3819..4793
location: region:3819-4793:1
so has part: feature:3819-4793:1:exon
subclass of: SO_0000010

12079590
type: Gene
SIO_000068: ncbigene

position:3819:1
position: 3819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4793:1
position: 4793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3819-4793:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLNILMTHLINPLAYIVPVLLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLAMTLWAPMPMPHPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFSGGYTLQTFNTTQESIWLLVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLFLGASHIPSIPELTTINLMTKAALLSILFLWVRASYPRFRYDQLMHLVWKNFLPLTLAFVLWHTALPIALAGLPPQL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 3819..4793
location: region:3819-4793:1
so has part: feature:3819-4793:1:exon

YP_006073234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3819-4793:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Ile
so part of: sequence
location: 4797..4870
location: region:4797-4870:1
so has part: feature:4797-4870:1:region

position:4797:1
position: 4797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4870:1
position: 4870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4797-4870:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Gln
so part of: sequence
location: complement(4869..4938)
location: region:4869-4938:-1
so has part: feature:4869-4938:-1:region

position:4869:-1
position: 4869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4938:-1
position: 4938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4869-4938:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Met
so part of: sequence
location: 4941..5009
location: region:4941-5009:1
so has part: feature:4941-5009:1:region

position:4941:1
position: 4941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5009:1
position: 5009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4941-5009:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ND2
so part of: sequence
location: 5010..6055
location: region:5010-6055:1
so has part: feature:5010-6055:1:exon
subclass of: SO_0000010

12079591
type: Gene
SIO_000068: ncbigene

position:5010:1
position: 5010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6055:1
position: 6055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5010-6055:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:6054..6055,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYVLAILLSSLGLGTTLTFASSHWLLAWMGLEINTLAITPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWMTGEWSINDLTNPIASTMFMTALALKIGLAPMHFWLPEVLQGLDLTTGLILSTWQKLAPFALIIQTAQTIDPTLLTLLGATSTLVGGWGGLNQTQLRKILAYSSIAHMGWMIIVIQYAPQLTLIALGTYIIMTSAAFLTLKTSFTTKINTLATTWSKNPILTSATALALLSLGGLPPLTGFMPKWLILQELTKQDLPIIATVMALAALISLYFYLRLCYAMTLTISPNTTNSTTPWRIQTTQTLLPLALFTTTALGLLPMTPTIMMLTT
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 5010..6055
location: region:5010-6055:1
so has part: feature:5010-6055:1:exon

YP_006073235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5010-6055:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Trp
so part of: sequence
location: 6056..6126
location: region:6056-6126:1
so has part: feature:6056-6126:1:region

position:6056:1
position: 6056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6126:1
position: 6126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6056-6126:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Ala
so part of: sequence
location: complement(6129..6197)
location: region:6129-6197:-1
so has part: feature:6129-6197:-1:region

position:6129:-1
position: 6129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6197:-1
position: 6197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6129-6197:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Asn
so part of: sequence
location: complement(6200..6272)
location: region:6200-6272:-1
so has part: feature:6200-6272:-1:region

position:6200:-1
position: 6200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6272:-1
position: 6272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6200-6272:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Cys
so part of: sequence
location: complement(6305..6375)
location: region:6305-6375:-1
so has part: feature:6305-6375:-1:region

position:6305:-1
position: 6305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6375:-1
position: 6375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6305-6375:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Tyr
so part of: sequence
location: 6374..6444
location: region:6374-6444:1
so has part: feature:6374-6444:1:region

position:6374:1
position: 6374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6444:1
position: 6444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6374-6444:1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: COX1
so part of: sequence
location: 6446..7996
location: region:6446-7996:1
so has part: feature:6446-7996:1:exon
subclass of: SO_0000010

12079592
type: Gene
SIO_000068: ncbigene

position:6446:1
position: 6446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7996:1
position: 7996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6446-7996:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMAGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFIATTINMKPPAISQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAAFVHWFPLLTGYTLHSAWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALWNTVSSIGSLISLIAVIMFLFILWEAFAAKREVLSVELTMTNVEWLHGCPPPYHTYEEPAFVQIQSN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 6446..7996
location: region:6446-7996:1
so has part: feature:6446-7996:1:exon

YP_006073236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6446-7996:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(7997..8067)
location: region:7997-8067:-1
so has part: feature:7997-8067:-1:region

position:7997:-1
position: 7997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8067:-1
position: 8067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7997-8067:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Asp
so part of: sequence
location: 8071..8142
location: region:8071-8142:1
so has part: feature:8071-8142:1:region

position:8071:1
position: 8071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8142:1
position: 8142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8071-8142:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: COX2
so part of: sequence
location: 8158..8848
location: region:8158-8848:1
so has part: feature:8158-8848:1:exon
subclass of: SO_0000010

12079593
type: Gene
SIO_000068: ncbigene

position:8158:1
position: 8158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8848:1
position: 8848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8158-8848:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8848,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPTQLGFQDAASPVMEELLHFHDHALMIVLLISTLVLYIITAMVSTKLTNKYILDSQEIEIVWTILPAVILVLIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYENLGFDSYMIPTQDLTPGQFRLLETDHRMVVPMESPVRVLVSAEDVLHSWAVPSLGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFENWSSLMLEDA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 8158..8848
location: region:8158-8848:1
so has part: feature:8158-8848:1:exon

YP_006073237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8158-8848:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Lys
so part of: sequence
location: 8849..8924
location: region:8849-8924:1
so has part: feature:8849-8924:1:region

position:8849:1
position: 8849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8924:1
position: 8924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8849-8924:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ATP8
so part of: sequence
location: 8926..9090
location: region:8926-9090:1
so has part: feature:8926-9090:1:exon
subclass of: SO_0000010

12079594
type: Gene
SIO_000068: ncbigene

position:8926:1
position: 8926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9090:1
position: 9090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8926-9090:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPGPWFAILVFSWLIFLTIIPTKILNHISPNEPTPVSAEKHKTESWDWPW
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 8926..9090
location: region:8926-9090:1
so has part: feature:8926-9090:1:exon

YP_006073238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8926-9090:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ATP6
so part of: sequence
location: 9084..9767
location: region:9084-9767:1
so has part: feature:9084-9767:1:exon
subclass of: SO_0000010

12079595
type: Gene
SIO_000068: ncbigene

position:9084:1
position: 9084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9767:1
position: 9767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9084-9767:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MMTSFFDQFASPSYLGIPLIAIAIALPWVLYPTPSSRWINNRLITIQGWFINRFTNQLLLPLNVGGHKWALLLASLMIFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTVALGPLLPEGTPIPLIPVLIIIETISPLIRPLALGVRLTANLTAGHLLIQLIASAVIVLLPMMPTVAILTATVLFLFTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 9084..9767
location: region:9084-9767:1
so has part: feature:9084-9767:1:exon

YP_006073239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9084-9767:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: COX3
so part of: sequence
location: 9768..10553
location: region:9768-10553:1
so has part: feature:9768-10553:1:exon
subclass of: SO_0000010

12079596
type: Gene
SIO_000068: ncbigene

position:9768:1
position: 9768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10553:1
position: 10553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9768-10553:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: COX3
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAIAALLMTSGLAIWFHFHSTTTMTLGLILLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGITPLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQAIQSLALTILLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSSFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 9768..10553
location: region:9768-10553:1
so has part: feature:9768-10553:1:exon

YP_006073240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9768-10553:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Gly
so part of: sequence
location: 10554..10625
location: region:10554-10625:1
so has part: feature:10554-10625:1:region

position:10554:1
position: 10554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10625:1
position: 10625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10554-10625:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ND3
so part of: sequence
location: 10626..10974
location: region:10626-10974:1
so has part: feature:10626-10974:1:exon
subclass of: SO_0000010

12079597
type: Gene
SIO_000068: ncbigene

position:10626:1
position: 10626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10974:1
position: 10974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10626-10974:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10974,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLIMTILVITVTLSLILAIVSFWLPQMNPDAEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLHNPTGTFFWGTTSLIWMTLGLISEWSQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 10626..10974
location: region:10626-10974:1
so has part: feature:10626-10974:1:exon

YP_006073241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10626-10974:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Arg
so part of: sequence
location: 10975..11044
location: region:10975-11044:1
so has part: feature:10975-11044:1:region

position:10975:1
position: 10975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11044:1
position: 11044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10975-11044:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ND4L
so part of: sequence
location: 11045..11341
location: region:11045-11341:1
so has part: feature:11045-11341:1:exon
subclass of: SO_0000010

12079588
type: Gene
SIO_000068: ncbigene

position:11045:1
position: 11045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11341:1
position: 11341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11045-11341:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGKMLSLLIALALWALQFESTGFSTAAMLLLAFSACEEGTGLALLVAPARTHGTDRLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 11045..11341
location: region:11045-11341:1
so has part: feature:11045-11341:1:exon

YP_006073242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11045-11341:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ND4
so part of: sequence
location: 11335..12712
location: region:11335-12712:1
so has part: feature:11335-12712:1:exon
subclass of: SO_0000010

12079585
type: Gene
SIO_000068: ncbigene

position:11335:1
position: 11335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12712:1
position: 12712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11335-12712:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:12712,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKVLIPTIMLFPTIWLVSPKWLWTTTTANSLLMASIILKWLMWTSEEGWTSSYMYVATDPLSTPLLLTCWLLPLMILASQNHITPEPISRQRSYITLLASLQTFLIMAFGATEIIKFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLNSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQVIFPLTAVWWFIANLANLALPPLPNLMGEIMIITTLFSWSPWTILLTGAGTLITAGYSLYMFLMSQRGPTPNHIMGLQPFHTREHLLMTLHLIPVLLLVTKPELMWGWCY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 11335..12712
location: region:11335-12712:1
so has part: feature:11335-12712:1:exon

YP_006073243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11335-12712:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-His
so part of: sequence
location: 12713..12781
location: region:12713-12781:1
so has part: feature:12713-12781:1:region

position:12713:1
position: 12713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12781:1
position: 12781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12713-12781:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 12782..12850
location: region:12782-12850:1
so has part: feature:12782-12850:1:region

position:12782:1
position: 12782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12850:1
position: 12850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12782-12850:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 12851..12924
location: region:12851-12924:1
so has part: feature:12851-12924:1:region

position:12851:1
position: 12851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12924:1
position: 12924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12851-12924:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ND5
so part of: sequence
location: 12928..14751
location: region:12928-14751:1
so has part: feature:12928-14751:1:exon
subclass of: SO_0000010

12079586
type: Gene
SIO_000068: ncbigene

position:12928:1
position: 12928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14751:1
position: 14751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12928-14751:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MALIMHSSLLLIFFILVYPLITTLNPNQQESKLAEKAKTAVSSAFFISLLPLMIFLNLKTEGIITNWHWMNTQTFDINISFKFDHYSLIFVPIALYVTWSILEFALWYMHSDPYINRFFKYLLTFLVAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAVIYNRVGDIGLIMAMAWLAMNLNSWEIQQIFTLSKNFDMTIPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNQLALTICLCLGALTSLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFNIMPATSTYFTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALILTLIATLFTAVYSFRLVYFVTMGTPRFLPLSPINENNPLVINSIKRLAWGSIIAGLIITQNFLPMKTPIMTMPTTLKMAALLVTIVGLMVAMDLANMTSKQVKITPTITTHHFSNMLGFFPAITHRLLPKLNLTLGQSTATQLDKTWLGTIGTKGLGLAQTTMAKITNDITRGMIKTYLTIFLLTMILATIPILL
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 12928..14751
location: region:12928-14751:1
so has part: feature:12928-14751:1:exon

YP_006073244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12928-14751:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: ND6
so part of: sequence
location: complement(14748..15269)
location: region:14748-15269:-1
so has part: feature:14748-15269:-1:exon
subclass of: SO_0000010

12079587
type: Gene
SIO_000068: ncbigene

position:14748:-1
position: 14748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15269:-1
position: 15269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14748-15269:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYFMFLLLMALVVGLVAVASNPTPYFAALGLVVAAGVGCGVLVGHGGSFLSLVLFLIYLGGMLVVFAYSAALAAEPFPEAWGSRSVFGYVLVYLLGVGLVAGLFWGGWYEGSWVVVDGLKEFSILRGDISGVAVMYSSGGGTLVICAWVLLLTLLVVLELTRGLSRGTLRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(14748..15269)
location: region:14748-15269:-1
so has part: feature:14748-15269:-1:exon

YP_006073245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14748-15269:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Glu
so part of: sequence
location: 15270..15338
location: region:15270-15338:1
so has part: feature:15270-15338:1:region

position:15270:1
position: 15270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15338:1
position: 15338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15270-15338:1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 84645
gene: CYTB
so part of: sequence
location: 15344..16484
location: region:15344-16484:1
so has part: feature:15344-16484:1:exon
subclass of: SO_0000010

12079589
type: Gene
SIO_000068: ncbigene

position:15344:1
position: 15344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16484:1
position: 16484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15344-16484:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 84645
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:16484,aa:TERM)
transl table: 2
product: cytochrome b
translation: MASLRKTHPLIKIANDALVDLPAPSNISTWWNFGSLLGLCLITQILTGLFLAMHYTPDISTAFSSVTHICRDVNYGWLIRNMHANGASFFFICIYMHIARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDMLVQWIWGGFSVDNATLTRFFAFHFLLPFIIAAATLIHLLFLHETGSNNPIGLNSDADKISFHPYFTYKDLLGFVIMLLALTLLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQRGLTFRPITQFLFWTLVADMIILTWIGGMPVEHPFIIIGQIASVLYFALFLIFIPLAGWLENKALEWA
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 15344..16484
location: region:15344-16484:1
so has part: feature:15344-16484:1:exon

YP_006073246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15344-16484:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Thr
so part of: sequence
location: 16485..16556
location: region:16485-16556:1
so has part: feature:16485-16556:1:region

position:16485:1
position: 16485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16556:1
position: 16556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16485-16556:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 84645
product: tRNA-Pro
so part of: sequence
location: complement(16556..16625)
location: region:16556-16625:-1
so has part: feature:16556-16625:-1:region

position:16556:-1
position: 16556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16625:-1
position: 16625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16556-16625:-1:region