Vidua chalybeata isolate OUT-0048 chromosome W, bVidCha1 merged haplotype, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Viduinae; Vidua.
REFSEQ INFORMATION: The reference sequence is identical to\nCM049565.1.\nAssembly name: bVidCha1 merged haplotype\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/12/21. The original whole-genome shotgun project has the\naccession JAPVQZ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-NOV-2021\nAssembly Method :: canu v. 2.1; merfin v. 1.0; purgedups v.\n 1.2.5; salsa v. 2.2\nAssembly Name :: bVidCha1 merged haplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 55.0x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026979565.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/03/2023\n##Genome-Annotation-Data-END##
ferrochelatase, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
ferrochelatase, mitochondrial, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
ferrochelatase, mitochondrial, transcript variant X3
ferrochelatase, mitochondrial, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon.
ferrochelatase, mitochondrial isoform X1
ferrochelatase, mitochondrial isoform X2
small nucleolar RNA SNORD58; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00151
Derived by automated computational analysis using gene prediction method: cmsearch.
60S ribosomal protein L17-like; Derived by automated computational analysis using gene prediction method: Gnomon.
60S ribosomal protein L17-like, transcript variant X1
60S ribosomal protein L17-like, transcript variant X2
60S ribosomal protein L17-like isoform X1
60S ribosomal protein L17-like isoform X2
ras GTPase-activating protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802365; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
uncharacterized LOC128802367; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquilin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
heterogeneous nuclear ribonucleoprotein K; Derived by automated computational analysis using gene prediction method: Gnomon.
heterogeneous nuclear ribonucleoprotein K, transcript variant X2
heterogeneous nuclear ribonucleoprotein K, transcript variant X1
heterogeneous nuclear ribonucleoprotein K isoform X2
heterogeneous nuclear ribonucleoprotein K isoform X1
uncharacterized LOC128802368; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
E3 ubiquitin-protein ligase KCMF1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ras-related protein Rab-7a-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
uncharacterized LOC128802363; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802374; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802373; Derived by automated computational analysis using gene prediction method: Gnomon.
ceramide transfer protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ceramide transfer protein-like, transcript variant X3
ceramide transfer protein-like, transcript variant X6
ceramide transfer protein-like, transcript variant X4
ceramide transfer protein-like, transcript variant X7
ceramide transfer protein-like, transcript variant X5
ceramide transfer protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
ceramide transfer protein-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
ceramide transfer protein-like, transcript variant X2
ceramide transfer protein-like isoform X3
ceramide transfer protein-like isoform X4
ceramide transfer protein-like isoform X1
ceramide transfer protein-like isoform X2
uncharacterized LOC128802375; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802378; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802378, transcript variant X2
uncharacterized LOC128802378, transcript variant X3
uncharacterized LOC128802378, transcript variant X4
uncharacterized LOC128802378, transcript variant X1
uncharacterized LOC128802378, transcript variant X5
creatine kinase S-type, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
microtubule-associated protein 1B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
alpha-ketoglutarate dehydrogenase component 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-ketoglutarate dehydrogenase component 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins