Vidua chalybeata isolate OUT-0048 chromosome 39, bVidCha1 merged haplotype, whole genome shotgun sequence.
type: Entry
definition: Vidua chalybeata isolate OUT-0048 chromosome 39, bVidCha1 merged haplotype, whole genome shotgun sequence.
sequence version: NC_071568.1
sequence date: 2023-03-06
sequence: sequence
division: CON
label: NC_071568.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA940449
dblink: SAMN12254000
keyword: WGS
keyword: RefSeq
source: Vidua chalybeata
organism: Vidua chalybeata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Viduinae; Vidua.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM049564.1.\nAssembly name: bVidCha1 merged haplotype\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/12/21. The original whole-genome shotgun project has the\naccession JAPVQZ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-NOV-2021\nAssembly Method :: canu v. 2.1; merfin v. 1.0; purgedups v.\n 1.2.5; salsa v. 2.2\nAssembly Name :: bVidCha1 merged haplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 55.0x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026979565.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/03/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 230807
topology: linear
so has quality: SO_0000987
location: 1..230807
location: region:1-230807:1
RO_0002162: 81927

NC_071568
type: RefSeq
SIO_000068: refseq

PRJNA940449
type: BioProject
SIO_000068: bioproject

SAMN12254000
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230807:1
position: 230807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-230807:1:source
so part of: sequence
organism: Vidua chalybeata
mol type: genomic DNA
isolate: OUT-0048
specimen voucher: MSB:Bird:30254
chromosome: 39
sex: female
tissue type: muscle
country: South Africa
lat lon: 28.04 S 26.29 E
collection date: 2011-01-16

81927
type: Taxonomy
SIO_000068: taxonomy

ETFB
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: ETFB
note: electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3629..27296
location: region:3629-27296:1
so has part: feature:3629-27296:1:exon
subclass of: SO_0000010

128802340
type: Gene
SIO_000068: ncbigene

position:3629:1
position: 3629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27296:1
position: 27296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3629-27296:1:exon

ETFB
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XR_008435371.1
SIO_010081: ETFB
so part of: ETFB
location: join(3629..3708,4909..5067,9077..9229,11046..11108,11688..11846,13335..15042,27276..27296)
location: region:3629-27296:1
so has part: feature:3629-3708:1:exon
so has part: feature:4909-5067:1:exon
so has part: feature:9077-9229:1:exon
so has part: feature:11046-11108:1:exon
so has part: feature:11688-11846:1:exon
so has part: feature:13335-15042:1:exon
so has part: feature:27276-27296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3629-3708:1:exon

position:3708:1
position: 3708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4909-5067:1:exon

position:4909:1
position: 4909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5067:1
position: 5067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9077-9229:1:exon

position:9077:1
position: 9077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9229:1
position: 9229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11046-11108:1:exon

position:11046:1
position: 11046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11108:1
position: 11108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11688-11846:1:exon

position:11688:1
position: 11688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11846:1
position: 11846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13335-15042:1:exon

position:13335:1
position: 13335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15042:1
position: 15042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27276-27296:1:exon

position:27276:1
position: 27276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968663.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(3629..3708,4909..5067,9077..9229,11046..11108,11688..11846,13335..15094)
location: region:3629-15094:1
so has part: feature:3629-3708:1:exon
so has part: feature:4909-5067:1:exon
so has part: feature:9077-9229:1:exon
so has part: feature:11046-11108:1:exon
so has part: feature:11688-11846:1:exon
so has part: feature:13335-15094:1:exon

position:15094:1
position: 15094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3629-3708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4909-5067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9077-9229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11046-11108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11688-11846:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13335-15094:1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALRVLVGVKRVIDFAVKVRVAPGGAAVQTQGVKHSLNPFCEIALEEAVRLREAGAAAEVVVATLGTRASQETLRTALAMGADRAVLAELGEGVAAGPREVAAALAALARRLQPHLVLLGKQAIDDDCNQTGQLLAAMLDWPQGTFASRVELEAGAVRVQREVDGGLETLRLRLPAVLTADLRLNEPRYATLPNIMKAKKKPLEVVATAELGLPAGPPRLRLLQLQEPPPRAGGEKVESVESLLGKLRQAGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(3652..3708,4909..5067,9077..9229,11046..11108,11688..11846,13335..13508)
location: region:3652-13508:1
so has part: feature:3652-3708:1:exon
so has part: feature:4909-5067:1:exon
so has part: feature:9077-9229:1:exon
so has part: feature:11046-11108:1:exon
so has part: feature:11688-11846:1:exon
so has part: feature:13335-13508:1:exon

XP_053824638.1
type: Protein
SIO_000068: ncbiprotein

position:3652:1
position: 3652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13508:1
position: 13508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3652-3708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4909-5067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9077-9229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11046-11108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11688-11846:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13335-13508:1:exon

PPP2R1A
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: PPP2R1A
note: protein phosphatase 2 scaffold subunit Aalpha; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15692..32406
location: region:15692-32406:1
so has part: feature:15692-32406:1:exon
subclass of: SO_0000010

128802334
type: Gene
SIO_000068: ncbigene

position:15692:1
position: 15692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32406:1
position: 32406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15692-32406:1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968652.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(15692..15819,16454..16544,16812..16912,19492..19724,21227..21374,22209..22364,23648..23762,24844..24914,25841..25975,27623..27796,28674..28734,29186..29340,30267..30409,31562..31653,32213..32406)
location: region:15692-32406:1
so has part: feature:15692-15819:1:exon
so has part: feature:16454-16544:1:exon
so has part: feature:16812-16912:1:exon
so has part: feature:19492-19724:1:exon
so has part: feature:21227-21374:1:exon
so has part: feature:22209-22364:1:exon
so has part: feature:23648-23762:1:exon
so has part: feature:24844-24914:1:exon
so has part: feature:25841-25975:1:exon
so has part: feature:27623-27796:1:exon
so has part: feature:28674-28734:1:exon
so has part: feature:29186-29340:1:exon
so has part: feature:30267-30409:1:exon
so has part: feature:31562-31653:1:exon
so has part: feature:32213-32406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15692-15819:1:exon

position:15819:1
position: 15819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16454-16544:1:exon

position:16454:1
position: 16454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16544:1
position: 16544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16812-16912:1:exon

position:16812:1
position: 16812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16912:1
position: 16912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19492-19724:1:exon

position:19492:1
position: 19492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19724:1
position: 19724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:21227-21374:1:exon

position:21227:1
position: 21227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21374:1
position: 21374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22209-22364:1:exon

position:22209:1
position: 22209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22364:1
position: 22364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23648-23762:1:exon

position:23648:1
position: 23648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23762:1
position: 23762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24844-24914:1:exon

position:24844:1
position: 24844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24914:1
position: 24914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:25841-25975:1:exon

position:25841:1
position: 25841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25975:1
position: 25975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:27623-27796:1:exon

position:27623:1
position: 27623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27796:1
position: 27796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:28674-28734:1:exon

position:28674:1
position: 28674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28734:1
position: 28734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:29186-29340:1:exon

position:29186:1
position: 29186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29340:1
position: 29340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:30267-30409:1:exon

position:30267:1
position: 30267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30409:1
position: 30409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:31562-31653:1:exon

position:31562:1
position: 31562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31653:1
position: 31653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:32213-32406:1:exon

position:32213:1
position: 32213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTTQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(15742..15819,16454..16544,16812..16912,19492..19724,21227..21374,22209..22364,23648..23762,24844..24914,25841..25975,27623..27796,28674..28734,29186..29340,30267..30409,31562..31653,32213..32229)
location: region:15742-32229:1
so has part: feature:15742-15819:1:exon
so has part: feature:16454-16544:1:exon
so has part: feature:16812-16912:1:exon
so has part: feature:19492-19724:1:exon
so has part: feature:21227-21374:1:exon
so has part: feature:22209-22364:1:exon
so has part: feature:23648-23762:1:exon
so has part: feature:24844-24914:1:exon
so has part: feature:25841-25975:1:exon
so has part: feature:27623-27796:1:exon
so has part: feature:28674-28734:1:exon
so has part: feature:29186-29340:1:exon
so has part: feature:30267-30409:1:exon
so has part: feature:31562-31653:1:exon
so has part: feature:32213-32229:1:exon

XP_053824627.1
type: Protein
SIO_000068: ncbiprotein

position:15742:1
position: 15742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32229:1
position: 32229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15742-15819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16454-16544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16812-16912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19492-19724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21227-21374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22209-22364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23648-23762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24844-24914:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25841-25975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27623-27796:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28674-28734:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:29186-29340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:30267-30409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:31562-31653:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:32213-32229:1:exon

LOC128802345
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802345
note: uncharacterized LOC128802345; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(29351..30226)
location: region:29351-30226:-1
so has part: feature:29351-30226:-1:exon
subclass of: SO_0000011

128802345
type: Gene
SIO_000068: ncbigene

position:29351:-1
position: 29351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30226:-1
position: 30226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29351-30226:-1:exon

LOC128802345
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128802345
product: uncharacterized LOC128802345, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008435374.1
SIO_010081: LOC128802345
subclass of: SO_0000673
so part of: LOC128802345
location: complement(join(29351..29410,29474..29679,29826..30018,30196..30226))
location: region:29351-30226:-1
so has part: feature:30196-30226:-1:exon
so has part: feature:29826-30018:-1:exon
so has part: feature:29474-29679:-1:exon
so has part: feature:29351-29410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30196-30226:-1:exon

position:30196:-1
position: 30196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29826-30018:-1:exon

position:29826:-1
position: 29826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30018:-1
position: 30018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29474-29679:-1:exon

position:29474:-1
position: 29474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29679:-1
position: 29679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29351-29410:-1:exon

position:29410:-1
position: 29410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128802345
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128802345
product: uncharacterized LOC128802345, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008435373.1
SIO_010081: LOC128802345
subclass of: SO_0000673
so part of: LOC128802345
location: complement(join(29351..29410,29474..29679,29826..30194))
location: region:29351-30194:-1
so has part: feature:29826-30194:-1:exon
so has part: feature:29474-29679:-1:exon
so has part: feature:29351-29410:-1:exon

position:30194:-1
position: 30194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29826-30194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29474-29679:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29351-29410:-1:exon

LOC128802346
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802346
note: uncharacterized LOC128802346; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(31298..31621)
location: region:31298-31621:-1
so has part: feature:31298-31621:-1:exon
subclass of: SO_0000011

128802346
type: Gene
SIO_000068: ncbigene

position:31298:-1
position: 31298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31621:-1
position: 31621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31298-31621:-1:exon

LOC128802346
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128802346
product: uncharacterized LOC128802346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008435375.1
SIO_010081: LOC128802346
subclass of: SO_0000673
so part of: LOC128802346
location: complement(join(31298..31322,31433..31456,31536..31621))
location: region:31298-31621:-1
so has part: feature:31536-31621:-1:exon
so has part: feature:31433-31456:-1:exon
so has part: feature:31298-31322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31536-31621:-1:exon

position:31536:-1
position: 31536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31433-31456:-1:exon

position:31433:-1
position: 31433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31456:-1
position: 31456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31298-31322:-1:exon

position:31322:-1
position: 31322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMG9
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: SMG9
note: SMG9 nonsense mediated mRNA decay factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 32700..47717
location: region:32700-47717:1
so has part: feature:32700-47717:1:exon
subclass of: SO_0000010

128802342
type: Gene
SIO_000068: ncbigene

position:32700:1
position: 32700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47717:1
position: 47717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32700-47717:1:exon

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968666.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(32700..33279,34230..34301,34420..34663,35089..35186,35266..35378,36676..36787,37969..38064,38154..38239,39799..39902,42571..42678,44859..44987,46346..46487,47589..47717)
location: region:32700-47717:1
so has part: feature:32700-33279:1:exon
so has part: feature:34230-34301:1:exon
so has part: feature:34420-34663:1:exon
so has part: feature:35089-35186:1:exon
so has part: feature:35266-35378:1:exon
so has part: feature:36676-36787:1:exon
so has part: feature:37969-38064:1:exon
so has part: feature:38154-38239:1:exon
so has part: feature:39799-39902:1:exon
so has part: feature:42571-42678:1:exon
so has part: feature:44859-44987:1:exon
so has part: feature:46346-46487:1:exon
so has part: feature:47589-47717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32700-33279:1:exon

position:33279:1
position: 33279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34230-34301:1:exon

position:34230:1
position: 34230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34301:1
position: 34301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34420-34663:1:exon

position:34420:1
position: 34420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34663:1
position: 34663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35089-35186:1:exon

position:35089:1
position: 35089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35186:1
position: 35186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:35266-35378:1:exon

position:35266:1
position: 35266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35378:1
position: 35378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:36676-36787:1:exon

position:36676:1
position: 36676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36787:1
position: 36787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:37969-38064:1:exon

position:37969:1
position: 37969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38064:1
position: 38064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:38154-38239:1:exon

position:38154:1
position: 38154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38239:1
position: 38239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:39799-39902:1:exon

position:39799:1
position: 39799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39902:1
position: 39902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:42571-42678:1:exon

position:42571:1
position: 42571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42678:1
position: 42678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44859-44987:1:exon

position:44859:1
position: 44859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44987:1
position: 44987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:46346-46487:1:exon

position:46346:1
position: 46346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46487:1
position: 46487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:47589-47717:1:exon

position:47589:1
position: 47589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nonsense-mediated mRNA decay factor SMG9
translation: MSDSGQSPAPGARRRCWNREKEPEGGGERREQGEEPAGPLQKTPIILAKPPAERQQPPPAAPKAGPAQAPPPPAPAPPIVLMKARGEEGRGGGGASATAGEGPQQAPPTEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVMSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDTQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDSSGAGAEEPSEYYPHLVFVQTRAPPECFCPRRVGQMQRVLGRLMAHSRLKYRGSLSMRELLPSPPGAPPGPPPEPEVNLFLLPPLEEEPEDALPRGGGGALFPALPPFRGRGGLGGLLARLRGRVLAAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(33190..33279,34230..34301,34420..34663,35089..35186,35266..35378,36676..36787,37969..38064,38154..38239,39799..39902,42571..42678,44859..44987,46346..46487,47589..47667)
location: region:33190-47667:1
so has part: feature:33190-33279:1:exon
so has part: feature:34230-34301:1:exon
so has part: feature:34420-34663:1:exon
so has part: feature:35089-35186:1:exon
so has part: feature:35266-35378:1:exon
so has part: feature:36676-36787:1:exon
so has part: feature:37969-38064:1:exon
so has part: feature:38154-38239:1:exon
so has part: feature:39799-39902:1:exon
so has part: feature:42571-42678:1:exon
so has part: feature:44859-44987:1:exon
so has part: feature:46346-46487:1:exon
so has part: feature:47589-47667:1:exon

XP_053824641.1
type: Protein
SIO_000068: ncbiprotein

position:33190:1
position: 33190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47667:1
position: 47667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33190-33279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34230-34301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34420-34663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35089-35186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35266-35378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36676-36787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37969-38064:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38154-38239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:39799-39902:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42571-42678:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44859-44987:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46346-46487:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:47589-47667:1:exon

LOC128802347
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802347
note: uncharacterized LOC128802347; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38165..46413)
location: region:38165-46413:-1
so has part: feature:38165-46413:-1:exon
subclass of: SO_0000011

128802347
type: Gene
SIO_000068: ncbigene

position:38165:-1
position: 38165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46413:-1
position: 46413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38165-46413:-1:exon

LOC128802347
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128802347
product: uncharacterized LOC128802347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008435376.1
SIO_010081: LOC128802347
subclass of: SO_0000673
so part of: LOC128802347
location: complement(join(38165..38233,38362..38422,46324..46413))
location: region:38165-46413:-1
so has part: feature:46324-46413:-1:exon
so has part: feature:38362-38422:-1:exon
so has part: feature:38165-38233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46324-46413:-1:exon

position:46324:-1
position: 46324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38362-38422:-1:exon

position:38362:-1
position: 38362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38422:-1
position: 38422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38165-38233:-1:exon

position:38233:-1
position: 38233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XRCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: XRCC1
note: X-ray repair cross complementing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 47925..66228
location: region:47925-66228:1
so has part: feature:47925-66228:1:exon
subclass of: SO_0000010

128802358
type: Gene
SIO_000068: ncbigene

position:47925:1
position: 47925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66228:1
position: 66228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47925-66228:1:exon

XRCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: XRCC1
product: X-ray repair cross complementing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968682.1
SIO_010081: XRCC1
subclass of: SO_0000673
so part of: XRCC1
location: join(47925..47928,48049..48134,48252..48344,49156..49254,50200..50364,51437..51511,52362..52461,52547..52620,54231..54284,54329..54582,54700..54816,56880..57071,64540..64622,64726..64816,65848..65923,66010..66228)
location: region:47925-66228:1
so has part: feature:47925-47928:1:exon
so has part: feature:48049-48134:1:exon
so has part: feature:48252-48344:1:exon
so has part: feature:49156-49254:1:exon
so has part: feature:50200-50364:1:exon
so has part: feature:51437-51511:1:exon
so has part: feature:52362-52461:1:exon
so has part: feature:52547-52620:1:exon
so has part: feature:54231-54284:1:exon
so has part: feature:54329-54582:1:exon
so has part: feature:54700-54816:1:exon
so has part: feature:56880-57071:1:exon
so has part: feature:64540-64622:1:exon
so has part: feature:64726-64816:1:exon
so has part: feature:65848-65923:1:exon
so has part: feature:66010-66228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47925-47928:1:exon

position:47928:1
position: 47928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48049-48134:1:exon

position:48049:1
position: 48049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48134:1
position: 48134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48252-48344:1:exon

position:48252:1
position: 48252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48344:1
position: 48344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49156-49254:1:exon

position:49156:1
position: 49156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49254:1
position: 49254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:50200-50364:1:exon

position:50200:1
position: 50200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50364:1
position: 50364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51437-51511:1:exon

position:51437:1
position: 51437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51511:1
position: 51511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52362-52461:1:exon

position:52362:1
position: 52362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52461:1
position: 52461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:52547-52620:1:exon

position:52547:1
position: 52547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52620:1
position: 52620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54231-54284:1:exon

position:54231:1
position: 54231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54284:1
position: 54284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:54329-54582:1:exon

position:54329:1
position: 54329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54582:1
position: 54582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:54700-54816:1:exon

position:54700:1
position: 54700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54816:1
position: 54816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:56880-57071:1:exon

position:56880:1
position: 56880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57071:1
position: 57071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:64540-64622:1:exon

position:64540:1
position: 64540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64622:1
position: 64622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:64726-64816:1:exon

position:64726:1
position: 64726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64816:1
position: 64816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:65848-65923:1:exon

position:65848:1
position: 65848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65923:1
position: 65923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:66010-66228:1:exon

position:66010:1
position: 66010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XRCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: XRCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein XRCC1
translation: MRDFRRSREAAAAMAEIPFTRVVSVTSADPRHPAENLLRPEDGGRWRGAAAGEKQMSVVLELGDPRPIHSLHVGNDGAAFVEVLLGSSAGGDFQVLLPSAALMSPSESRAGAGPGRVRLFGPEALVKRPATPTARWDRLQVVLSQPYCQSRPYGLSFIRVFAAPEEGEEPPPAPRRRLGPFTLREEGEGSPRRPPGALFYSRPSPTPAPAQPPPGPSYATAALQGSAGDGTQPPKRRPPSPTPPSPTNGAPPPFPRPPSPQKPGTAPPKTRDPPPKNPGPPPKNPGPPPKSPVLGGVVLALSGFQNPLRAHLRAAAAALGAEYRPDWTPECTHLVCAFARTPKAARARQRGGVVVAPGWIWACQREGRRLSCGPYLLDGPASSSSDGEGPDDAPPPSRPSPKVKKGAGPTHLDTPGTPPPTAPATPPESGDSDGQSEDSDPYGGSTEENSEDEEGEGEPIPPCPVHFFEDKKFFLHGDFPEGEGRRLRRFVVAFGGSLAPSLDDSVTHVVTSQDWDPAFQEALKLRPSLVFVRPHWLLLCGERQRPLPAQPFLVTSAMTSSA
SIO_010081: XRCC1
subclass of: SO_0000673
so part of: XRCC1
location: join(47925..47928,48049..48134,48252..48344,49156..49254,50200..50364,51437..51511,52362..52461,52547..52620,54231..54284,54329..54582,54700..54816,56880..57071,64540..64622,64726..64816,65848..65923,66010..66135)
location: region:47925-66135:1
so has part: feature:47925-47928:1:exon
so has part: feature:48049-48134:1:exon
so has part: feature:48252-48344:1:exon
so has part: feature:49156-49254:1:exon
so has part: feature:50200-50364:1:exon
so has part: feature:51437-51511:1:exon
so has part: feature:52362-52461:1:exon
so has part: feature:52547-52620:1:exon
so has part: feature:54231-54284:1:exon
so has part: feature:54329-54582:1:exon
so has part: feature:54700-54816:1:exon
so has part: feature:56880-57071:1:exon
so has part: feature:64540-64622:1:exon
so has part: feature:64726-64816:1:exon
so has part: feature:65848-65923:1:exon
so has part: feature:66010-66135:1:exon

XP_053824657.1
type: Protein
SIO_000068: ncbiprotein

position:66135:1
position: 66135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47925-47928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48049-48134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48252-48344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49156-49254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50200-50364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51437-51511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52362-52461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52547-52620:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54231-54284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:54329-54582:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:54700-54816:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56880-57071:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64540-64622:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64726-64816:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:65848-65923:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:66010-66135:1:exon

LOC128802343
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802343
note: uncharacterized LOC128802343; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52652..54223)
location: region:52652-54223:-1
so has part: feature:52652-54223:-1:exon
subclass of: SO_0000011

128802343
type: Gene
SIO_000068: ncbigene

position:52652:-1
position: 52652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54223:-1
position: 54223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52652-54223:-1:exon

LOC128802343
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128802343
product: uncharacterized LOC128802343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008435372.1
SIO_010081: LOC128802343
subclass of: SO_0000673
so part of: LOC128802343
location: complement(join(52652..52704,52943..53076,53150..54223))
location: region:52652-54223:-1
so has part: feature:53150-54223:-1:exon
so has part: feature:52943-53076:-1:exon
so has part: feature:52652-52704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53150-54223:-1:exon

position:53150:-1
position: 53150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52943-53076:-1:exon

position:52943:-1
position: 52943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53076:-1
position: 53076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52652-52704:-1:exon

position:52704:-1
position: 52704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETHE1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: ETHE1
note: ETHE1 persulfide dioxygenase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66887..78321
location: region:66887-78321:1
so has part: feature:66887-78321:1:exon
subclass of: SO_0000010

128802339
type: Gene
SIO_000068: ncbigene

position:66887:1
position: 66887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78321:1
position: 78321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66887-78321:1:exon

ETHE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: ETHE1
product: ETHE1 persulfide dioxygenase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968662.1
SIO_010081: ETHE1
subclass of: SO_0000673
so part of: ETHE1
location: join(66887..67050,68912..69056,71399..71544,74686..74815,77246..77362,78137..78321)
location: region:66887-78321:1
so has part: feature:66887-67050:1:exon
so has part: feature:68912-69056:1:exon
so has part: feature:71399-71544:1:exon
so has part: feature:74686-74815:1:exon
so has part: feature:77246-77362:1:exon
so has part: feature:78137-78321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66887-67050:1:exon

position:67050:1
position: 67050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68912-69056:1:exon

position:68912:1
position: 68912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69056:1
position: 69056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71399-71544:1:exon

position:71399:1
position: 71399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71544:1
position: 71544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74686-74815:1:exon

position:74686:1
position: 74686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74815:1
position: 74815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77246-77362:1:exon

position:77246:1
position: 77246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77362:1
position: 77362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78137-78321:1:exon

position:78137:1
position: 78137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETHE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: ETHE1
product: ETHE1 persulfide dioxygenase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968661.1
SIO_010081: ETHE1
subclass of: SO_0000673
so part of: ETHE1
location: join(66891..67050,68912..69056,71399..71544,74686..74815,76510..76599,77246..77362,78137..78321)
location: region:66891-78321:1
so has part: feature:66891-67050:1:exon
so has part: feature:68912-69056:1:exon
so has part: feature:71399-71544:1:exon
so has part: feature:74686-74815:1:exon
so has part: feature:76510-76599:1:exon
so has part: feature:77246-77362:1:exon
so has part: feature:78137-78321:1:exon

position:66891:1
position: 66891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66891-67050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68912-69056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71399-71544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74686-74815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76510-76599:1:exon

position:76510:1
position: 76510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76599:1
position: 76599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77246-77362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78137-78321:1:exon

ETHE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: ETHE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: persulfide dioxygenase ETHE1, mitochondrial isoform X1
translation: MSLLRRLRAVAAVAAVATGRGLATAAGEGRQLLLRQLFEASSCTYTYLLADASTGDAVIIDPVLETVPRDLRLLRELGLTLRYAANTHCHADHVTGSGALRRALGCRSAIGRESGARADLRLRDGDLLRFGAFALRVVPTPGHTPGCVTFVLDDASMAFTGDALLVRGCGRTDFQQGCARTLHRSVHERIFSLPESCRVYPGHDYQGHTMSTVGEERRHNPRLTLGADEFVALMEGLQLPRPRLMDVAIPANLRCGIQDEP
SIO_010081: ETHE1
subclass of: SO_0000673
so part of: ETHE1
location: join(66943..67050,68912..69056,71399..71544,74686..74815,76510..76599,77246..77362,78137..78186)
location: region:66943-78186:1
so has part: feature:66943-67050:1:exon
so has part: feature:68912-69056:1:exon
so has part: feature:71399-71544:1:exon
so has part: feature:74686-74815:1:exon
so has part: feature:76510-76599:1:exon
so has part: feature:77246-77362:1:exon
so has part: feature:78137-78186:1:exon

XP_053824636.1
type: Protein
SIO_000068: ncbiprotein

position:66943:1
position: 66943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78186:1
position: 78186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66943-67050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68912-69056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71399-71544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74686-74815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76510-76599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77246-77362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78137-78186:1:exon

ETHE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: ETHE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: persulfide dioxygenase ETHE1, mitochondrial isoform X2
translation: MSLLRRLRAVAAVAAVATGRGLATAAGEGRQLLLRQLFEASSCTYTYLLADASTGDAVIIDPVLETVPRDLRLLRELGLTLRYAANTHCHADHVTGSGALRRALGCRSAIGRESGARADLRLRDGDLLRFGAFALRVVPTPGHTPGCVTFVLDDASMAFTGDALLVRGCGRTDFQQGHTMSTVGEERRHNPRLTLGADEFVALMEGLQLPRPRLMDVAIPANLRCGIQDEP
SIO_010081: ETHE1
subclass of: SO_0000673
so part of: ETHE1
location: join(66943..67050,68912..69056,71399..71544,74686..74815,77246..77362,78137..78186)
location: region:66943-78186:1
so has part: feature:66943-67050:1:exon
so has part: feature:68912-69056:1:exon
so has part: feature:71399-71544:1:exon
so has part: feature:74686-74815:1:exon
so has part: feature:77246-77362:1:exon
so has part: feature:78137-78186:1:exon

XP_053824637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66943-67050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68912-69056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71399-71544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74686-74815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77246-77362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78137-78186:1:exon

PHLDB3
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: PHLDB3
note: pleckstrin homology like domain family B member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78395..86641
location: region:78395-86641:1
so has part: feature:78395-86641:1:exon
subclass of: SO_0000010

128802338
type: Gene
SIO_000068: ncbigene

position:78395:1
position: 78395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86641:1
position: 86641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78395-86641:1:exon

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053968657.1
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: join(78395..78624,79499..79537,79945..80076,80587..80694,81796..81898,83040..83076,84582..84669,85102..85218,85750..85927,86303..86388,86506..86641)
location: region:78395-86641:1
so has part: feature:78395-78624:1:exon
so has part: feature:79499-79537:1:exon
so has part: feature:79945-80076:1:exon
so has part: feature:80587-80694:1:exon
so has part: feature:81796-81898:1:exon
so has part: feature:83040-83076:1:exon
so has part: feature:84582-84669:1:exon
so has part: feature:85102-85218:1:exon
so has part: feature:85750-85927:1:exon
so has part: feature:86303-86388:1:exon
so has part: feature:86506-86641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78395-78624:1:exon

position:78624:1
position: 78624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79499-79537:1:exon

position:79499:1
position: 79499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79537:1
position: 79537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79945-80076:1:exon

position:79945:1
position: 79945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80076:1
position: 80076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80587-80694:1:exon

position:80587:1
position: 80587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80694:1
position: 80694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81796-81898:1:exon

position:81796:1
position: 81796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81898:1
position: 81898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83040-83076:1:exon

position:83040:1
position: 83040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83076:1
position: 83076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84582-84669:1:exon

position:84582:1
position: 84582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84669:1
position: 84669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85102-85218:1:exon

position:85102:1
position: 85102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85218:1
position: 85218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:85750-85927:1:exon

position:85750:1
position: 85750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85927:1
position: 85927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:86303-86388:1:exon

position:86303:1
position: 86303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86388:1
position: 86388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86506-86641:1:exon

position:86506:1
position: 86506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053968658.1
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: join(78395..78624,79499..79537,79945..80076,80587..80694,81796..81898,83040..83076,84591..84669,85102..85218,85750..85927,86303..86388,86506..86641)
location: region:78395-86641:1
so has part: feature:78395-78624:1:exon
so has part: feature:79499-79537:1:exon
so has part: feature:79945-80076:1:exon
so has part: feature:80587-80694:1:exon
so has part: feature:81796-81898:1:exon
so has part: feature:83040-83076:1:exon
so has part: feature:84591-84669:1:exon
so has part: feature:85102-85218:1:exon
so has part: feature:85750-85927:1:exon
so has part: feature:86303-86388:1:exon
so has part: feature:86506-86641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78395-78624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79499-79537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79945-80076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80587-80694:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81796-81898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83040-83076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84591-84669:1:exon

position:84591:1
position: 84591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85102-85218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85750-85927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86303-86388:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86506-86641:1:exon

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053968660.1
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: join(78395..78624,79499..79537,79945..80076,80602..80694,81796..81898,83040..83076,84582..84669,85102..85218,85750..85927,86303..86388,86506..86641)
location: region:78395-86641:1
so has part: feature:78395-78624:1:exon
so has part: feature:79499-79537:1:exon
so has part: feature:79945-80076:1:exon
so has part: feature:80602-80694:1:exon
so has part: feature:81796-81898:1:exon
so has part: feature:83040-83076:1:exon
so has part: feature:84582-84669:1:exon
so has part: feature:85102-85218:1:exon
so has part: feature:85750-85927:1:exon
so has part: feature:86303-86388:1:exon
so has part: feature:86506-86641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78395-78624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79499-79537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79945-80076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80602-80694:1:exon

position:80602:1
position: 80602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81796-81898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83040-83076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84582-84669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85102-85218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85750-85927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86303-86388:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86506-86641:1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X1
translation: MVHRGGGDSPPSPPGPGDGPAAALEGLRLEDERPPKEGGGAAMTSETISSEAVTSETMTSEMMTSQASVTAGGQPVLAQLMFSHCTDRRWILLGPPCDPPRVLALRSSVQGAIGLQRSGSLPRRRVGEGPGPPHPPRPRSQHGHGALALQLDPESYSLPSTCLRLAQLELRVREALAERERLLRAREARKAAKAPPTTDTPISHEATPSPAQDTPPVAQATPPPEPDLLCALRARGHRPEAVGGLRILGGSLRGPLTKMGGRIKTWRRRWFHLDPQRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKSPNPRLTFCLKTYERLFWLVAPSAEALRIWMDAVLTLTRGSGSF
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: join(78574..78624,79499..79537,79945..80076,80587..80694,81796..81898,83040..83076,84582..84669,85102..85218,85750..85927,86303..86388,86506..86640)
location: region:78574-86640:1
so has part: feature:78574-78624:1:exon
so has part: feature:79499-79537:1:exon
so has part: feature:79945-80076:1:exon
so has part: feature:80587-80694:1:exon
so has part: feature:81796-81898:1:exon
so has part: feature:83040-83076:1:exon
so has part: feature:84582-84669:1:exon
so has part: feature:85102-85218:1:exon
so has part: feature:85750-85927:1:exon
so has part: feature:86303-86388:1:exon
so has part: feature:86506-86640:1:exon

XP_053824632.1
type: Protein
SIO_000068: ncbiprotein

position:78574:1
position: 78574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86640:1
position: 86640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78574-78624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79499-79537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79945-80076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80587-80694:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81796-81898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83040-83076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84582-84669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85102-85218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85750-85927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86303-86388:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86506-86640:1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X2
translation: MVHRGGGDSPPSPPGPGDGPAAALEGLRLEDERPPKEGGGAAMTSETISSEAVTSETMTSEMMTSQASVTAGGQPVLAQLMFSHCTDRRWILLGPPCDPPRVLALRSSVQGAIGLQRSGSLPRRRVGEGPGPPHPPRPRSQHGHGALALQLDPESYSTCLRLAQLELRVREALAERERLLRAREARKAAKAPPTTDTPISHEATPSPAQDTPPVAQATPPPEPDLLCALRARGHRPEAVGGLRILGGSLRGPLTKMGGRIKTWRRRWFHLDPQRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKSPNPRLTFCLKTYERLFWLVAPSAEALRIWMDAVLTLTRGSGSF
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: join(78574..78624,79499..79537,79945..80076,80587..80694,81796..81898,83040..83076,84591..84669,85102..85218,85750..85927,86303..86388,86506..86640)
location: region:78574-86640:1
so has part: feature:78574-78624:1:exon
so has part: feature:79499-79537:1:exon
so has part: feature:79945-80076:1:exon
so has part: feature:80587-80694:1:exon
so has part: feature:81796-81898:1:exon
so has part: feature:83040-83076:1:exon
so has part: feature:84591-84669:1:exon
so has part: feature:85102-85218:1:exon
so has part: feature:85750-85927:1:exon
so has part: feature:86303-86388:1:exon
so has part: feature:86506-86640:1:exon

XP_053824633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78574-78624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79499-79537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79945-80076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80587-80694:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81796-81898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83040-83076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84591-84669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85102-85218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85750-85927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86303-86388:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86506-86640:1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X3
translation: MVHRGGGDSPPSPPGPGDGPAAALEGLRLEDERPPKEGGGAAMTSETISSEAVTSETMTSEMMTSQASVTAGGQLMFSHCTDRRWILLGPPCDPPRVLALRSSVQGAIGLQRSGSLPRRRVGEGPGPPHPPRPRSQHGHGALALQLDPESYSLPSTCLRLAQLELRVREALAERERLLRAREARKAAKAPPTTDTPISHEATPSPAQDTPPVAQATPPPEPDLLCALRARGHRPEAVGGLRILGGSLRGPLTKMGGRIKTWRRRWFHLDPQRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKSPNPRLTFCLKTYERLFWLVAPSAEALRIWMDAVLTLTRGSGSF
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: join(78574..78624,79499..79537,79945..80076,80602..80694,81796..81898,83040..83076,84582..84669,85102..85218,85750..85927,86303..86388,86506..86640)
location: region:78574-86640:1
so has part: feature:78574-78624:1:exon
so has part: feature:79499-79537:1:exon
so has part: feature:79945-80076:1:exon
so has part: feature:80602-80694:1:exon
so has part: feature:81796-81898:1:exon
so has part: feature:83040-83076:1:exon
so has part: feature:84582-84669:1:exon
so has part: feature:85102-85218:1:exon
so has part: feature:85750-85927:1:exon
so has part: feature:86303-86388:1:exon
so has part: feature:86506-86640:1:exon

XP_053824635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78574-78624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79499-79537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79945-80076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80602-80694:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81796-81898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83040-83076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84582-84669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85102-85218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85750-85927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86303-86388:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86506-86640:1:exon

LYPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LYPD3
note: LY6/PLAUR domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89265..100577)
location: region:89265-100577:-1
so has part: feature:89265-100577:-1:exon
subclass of: SO_0000010

128802335
type: Gene
SIO_000068: ncbigene

position:89265:-1
position: 89265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100577:-1
position: 100577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89265-100577:-1:exon

LYPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LYPD3
product: LY6/PLAUR domain containing 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968655.1
SIO_010081: LYPD3
subclass of: SO_0000673
so part of: LYPD3
location: complement(join(89265..90108,90178..90315,91596..91769,92413..92538,98203..98328,99766..99957,100049..100156,100519..100577))
location: region:89265-100577:-1
so has part: feature:100519-100577:-1:exon
so has part: feature:100049-100156:-1:exon
so has part: feature:99766-99957:-1:exon
so has part: feature:98203-98328:-1:exon
so has part: feature:92413-92538:-1:exon
so has part: feature:91596-91769:-1:exon
so has part: feature:90178-90315:-1:exon
so has part: feature:89265-90108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100519-100577:-1:exon

position:100519:-1
position: 100519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100049-100156:-1:exon

position:100049:-1
position: 100049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100156:-1
position: 100156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99766-99957:-1:exon

position:99766:-1
position: 99766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99957:-1
position: 99957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98203-98328:-1:exon

position:98203:-1
position: 98203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98328:-1
position: 98328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92413-92538:-1:exon

position:92413:-1
position: 92413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92538:-1
position: 92538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91596-91769:-1:exon

position:91596:-1
position: 91596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91769:-1
position: 91769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:90178-90315:-1:exon

position:90178:-1
position: 90178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90315:-1
position: 90315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89265-90108:-1:exon

position:90108:-1
position: 90108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LYPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LYPD3
product: LY6/PLAUR domain containing 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968654.1
SIO_010081: LYPD3
subclass of: SO_0000673
so part of: LYPD3
location: complement(join(89265..90108,90178..90315,91596..91769,92413..92538,97109..97231,98203..98328,99766..99957,100049..100156,100519..100577))
location: region:89265-100577:-1
so has part: feature:100519-100577:-1:exon
so has part: feature:100049-100156:-1:exon
so has part: feature:99766-99957:-1:exon
so has part: feature:98203-98328:-1:exon
so has part: feature:97109-97231:-1:exon
so has part: feature:92413-92538:-1:exon
so has part: feature:91596-91769:-1:exon
so has part: feature:90178-90315:-1:exon
so has part: feature:89265-90108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100519-100577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100049-100156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99766-99957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98203-98328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97109-97231:-1:exon

position:97109:-1
position: 97109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97231:-1
position: 97231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92413-92538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91596-91769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90178-90315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89265-90108:-1:exon

LYPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LYPD3
product: LY6/PLAUR domain containing 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968653.1
SIO_010081: LYPD3
subclass of: SO_0000673
so part of: LYPD3
location: complement(join(89265..90108,90178..90315,91596..91769,92413..92538,97109..97231,97843..97965,98203..98328,99766..99957,100049..100156,100519..100577))
location: region:89265-100577:-1
so has part: feature:100519-100577:-1:exon
so has part: feature:100049-100156:-1:exon
so has part: feature:99766-99957:-1:exon
so has part: feature:98203-98328:-1:exon
so has part: feature:97843-97965:-1:exon
so has part: feature:97109-97231:-1:exon
so has part: feature:92413-92538:-1:exon
so has part: feature:91596-91769:-1:exon
so has part: feature:90178-90315:-1:exon
so has part: feature:89265-90108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100519-100577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100049-100156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99766-99957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98203-98328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97843-97965:-1:exon

position:97843:-1
position: 97843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97965:-1
position: 97965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:97109-97231:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92413-92538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91596-91769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90178-90315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89265-90108:-1:exon

LYPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LYPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly6/PLAUR domain-containing protein 3 isoform X3
translation: MGWGWGWALLWGLLGTAPALRCPLCDVTGCRPPVACPSPRAVCRRTTLSALRDGRELRREESGCDVTGPPDVVITFRSHGELVTLREERWGEGEGRGGHAHGHAPDTPTNGSRREAGPPRLCPTCDGHDGSCGRPLAALPCPRPRDRCIDVISRGPGTGCRALQCLSCGEDDDGGCRDVTNVTCPTESDVCGEAVAAVSWSHGQLAVGWRGCGRGQPGALARALQLPGLVAFERRRNCRGEACNQQLPLGGHGALALPANTTDPSPNGLRCYGCPEAGPCPPTTIVHCYGDLRACFHGNVTLRAGNLTLWRELRGCVPDGDCGPERRGDDAASLGGSCCRGDLCNGKMADKSLFAPDLPRLELLPHGHAPTAAPDNATADGGGRNGTRGKMAAGGGGGASMDAGDRTAAGDAKTAAPGHDMAAGGRRAAGGKMAAGGKMAAGGKMVTRDKIADEDKMADGDRMGDGDKMAAGDKMDDGDKMAAGGKMVTRDKMADGDKMADGNKMAAGDKMADGDNMAASDNMADGDKMAAGHVAPRRPMGRKDGTKGPVGRGQSLGGPGWLLPFLLWPLLR
SIO_010081: LYPD3
subclass of: SO_0000673
so part of: LYPD3
location: complement(join(89303..90108,90178..90315,91596..91769,92413..92538,98203..98328,99766..99957,100049..100156,100519..100567))
location: region:89303-100567:-1
so has part: feature:100519-100567:-1:exon
so has part: feature:100049-100156:-1:exon
so has part: feature:99766-99957:-1:exon
so has part: feature:98203-98328:-1:exon
so has part: feature:92413-92538:-1:exon
so has part: feature:91596-91769:-1:exon
so has part: feature:90178-90315:-1:exon
so has part: feature:89303-90108:-1:exon

XP_053824630.1
type: Protein
SIO_000068: ncbiprotein

position:89303:-1
position: 89303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100567:-1
position: 100567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100519-100567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100049-100156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99766-99957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98203-98328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92413-92538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91596-91769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90178-90315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89303-90108:-1:exon

LYPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LYPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly6/PLAUR domain-containing protein 3 isoform X2
translation: MGWGWGWALLWGLLGTAPALRCPLCDVTGCRPPVACPSPRAVCRRTTLSALRDGRELRREESGCDVTGPPDVVITFRSHGELVTLREERWGEGEGRGGHAHGHAPDTPTNGSRREAGPPRLCPTCDGHDGSCGRPLAALPCPRPRDRCIDVISRGPGTEPGPPSRLRCWGCDGPAPSGCAPRELRCGWGRGRCFTARGRGCRALQCLSCGEDDDGGCRDVTNVTCPTESDVCGEAVAAVSWSHGQLAVGWRGCGRGQPGALARALQLPGLVAFERRRNCRGEACNQQLPLGGHGALALPANTTDPSPNGLRCYGCPEAGPCPPTTIVHCYGDLRACFHGNVTLRAGNLTLWRELRGCVPDGDCGPERRGDDAASLGGSCCRGDLCNGKMADKSLFAPDLPRLELLPHGHAPTAAPDNATADGGGRNGTRGKMAAGGGGGASMDAGDRTAAGDAKTAAPGHDMAAGGRRAAGGKMAAGGKMAAGGKMVTRDKIADEDKMADGDRMGDGDKMAAGDKMDDGDKMAAGGKMVTRDKMADGDKMADGNKMAAGDKMADGDNMAASDNMADGDKMAAGHVAPRRPMGRKDGTKGPVGRGQSLGGPGWLLPFLLWPLLR
SIO_010081: LYPD3
subclass of: SO_0000673
so part of: LYPD3
location: complement(join(89303..90108,90178..90315,91596..91769,92413..92538,97109..97231,98203..98328,99766..99957,100049..100156,100519..100567))
location: region:89303-100567:-1
so has part: feature:100519-100567:-1:exon
so has part: feature:100049-100156:-1:exon
so has part: feature:99766-99957:-1:exon
so has part: feature:98203-98328:-1:exon
so has part: feature:97109-97231:-1:exon
so has part: feature:92413-92538:-1:exon
so has part: feature:91596-91769:-1:exon
so has part: feature:90178-90315:-1:exon
so has part: feature:89303-90108:-1:exon

XP_053824629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100519-100567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100049-100156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99766-99957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98203-98328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97109-97231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92413-92538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91596-91769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90178-90315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89303-90108:-1:exon

LYPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LYPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly6/PLAUR domain-containing protein 3 isoform X1
translation: MGWGWGWALLWGLLGTAPALRCPLCDVTGCRPPVACPSPRAVCRRTTLSALRDGRELRREESGCDVTGPPDVVITFRSHGELVTLREERWGEGEGRGGHAHGHAPDTPTNGSRREAGPPRLCPTCDGHDGSCGRPLAALPCPRPRDRCIDVISRGPGTVGEGRIRGCGQAGPCRGLLAFDSGSGRGAALRCCQSDQCGEEPGPPSRLRCWGCDGPAPSGCAPRELRCGWGRGRCFTARGRGCRALQCLSCGEDDDGGCRDVTNVTCPTESDVCGEAVAAVSWSHGQLAVGWRGCGRGQPGALARALQLPGLVAFERRRNCRGEACNQQLPLGGHGALALPANTTDPSPNGLRCYGCPEAGPCPPTTIVHCYGDLRACFHGNVTLRAGNLTLWRELRGCVPDGDCGPERRGDDAASLGGSCCRGDLCNGKMADKSLFAPDLPRLELLPHGHAPTAAPDNATADGGGRNGTRGKMAAGGGGGASMDAGDRTAAGDAKTAAPGHDMAAGGRRAAGGKMAAGGKMAAGGKMVTRDKIADEDKMADGDRMGDGDKMAAGDKMDDGDKMAAGGKMVTRDKMADGDKMADGNKMAAGDKMADGDNMAASDNMADGDKMAAGHVAPRRPMGRKDGTKGPVGRGQSLGGPGWLLPFLLWPLLR
SIO_010081: LYPD3
subclass of: SO_0000673
so part of: LYPD3
location: complement(join(89303..90108,90178..90315,91596..91769,92413..92538,97109..97231,97843..97965,98203..98328,99766..99957,100049..100156,100519..100567))
location: region:89303-100567:-1
so has part: feature:100519-100567:-1:exon
so has part: feature:100049-100156:-1:exon
so has part: feature:99766-99957:-1:exon
so has part: feature:98203-98328:-1:exon
so has part: feature:97843-97965:-1:exon
so has part: feature:97109-97231:-1:exon
so has part: feature:92413-92538:-1:exon
so has part: feature:91596-91769:-1:exon
so has part: feature:90178-90315:-1:exon
so has part: feature:89303-90108:-1:exon

XP_053824628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100519-100567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100049-100156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99766-99957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98203-98328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97843-97965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97109-97231:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92413-92538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91596-91769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90178-90315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89303-90108:-1:exon

LOC128802348
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802348
note: mucin-5AC-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(100896..104380)
location: region:100896-104380:-1
so has part: feature:100896-104380:-1:exon
subclass of: SO_0000010

128802348
type: Gene
SIO_000068: ncbigene

position:100896:-1
position: 100896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104380:-1
position: 104380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100896-104380:-1:exon

LOC128802348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128802348
product: mucin-5AC-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053968667.1
SIO_010081: LOC128802348
subclass of: SO_0000673
so part of: LOC128802348
location: complement(join(100896..102952,103265..104380))
location: region:100896-104380:-1
so has part: feature:103265-104380:-1:exon
so has part: feature:100896-102952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103265-104380:-1:exon

position:103265:-1
position: 103265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100896-102952:-1:exon

position:102952:-1
position: 102952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128802348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128802348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC-like
translation: MVAPGGDIAVEGTEGPRVTGDPRDAWGRVTEAYGDATTVVAPVTTSPGGDKVLVATEGDISMEGTEDPGATGDPRDTLGRVTEAYGDATTTVASVPVSPGGDRVLVATSGDVAREVTDDPDVTGDPRDTSGRITDVHEDATTTVASVPVSPGGDKILVATSGDVAMEGTATPEATGDPRDTLGHLSDVTGDATTTVASVPVSPAGDKILESHGGDVAMEGTAQPGATNCSWDNLGRVPEVHEDATTTVASVPVSPAGDKVLVATSGDVAMEGTDDPGVTNDPRDTLGRVTEAYGDATTVVALVTTSPGGDKILESHGGDVAMEGTAQPGATNCSWDNLGRVPEVHEDATTTVASVPVSPGGDKVLVATSGDVAMEGTEDPGATNDPRDTLGRVTEAYGDATTAVAAVTTSPGGDKLLEAHGGDVAMEGTDDPGVTSDPRDTLGRVTEAYGDAITTVASVPVSPGGDKVLVATSGDISMEGTATPEASGGLGDTLGRVTEAYGDATTMVAAVTTSPGGDKILVATEGDISMEGTEDPGATNDPRDTLGRVTEAYGDATSTVASGPVSSGGDKILEAHRGDVAMEGTAIPNVTNDPRDTLGCVTEAYGDATTMVAPVTTSPGSDKLLEAHGGDVAMEGTAQPGATNCSWDTLGRVPDVPGDATTTVASVPVSPAGDKVLVATSGDVAMEGPTTPEATGDHGDTLGRVTEAYGDATTMVAAVTTSPGSDKLLVATSGDVAMEGTDDPGATSDSRDTSGGVTEAYGDATSMVASVPVSSAGDKVLVATSGDISMEGTATPEASGGLGDTLGRVTEAYGDATSTVASVPVSPGGDKVLVATEGDIAMEGTEDPGATGDPRDTLGRVTEAYGDATTAVAAATTSPGGDKVLVATSGDVTMEGTAPPKATNSSGDPPGAPRPSDVTAAAPPPPCRPPSAAFPVTAAPPPRGPPGLSGSAPSSSPLPSSWRCCCPSPSSCPERPSPPPPIYCPSPPPPPLE
SIO_010081: LOC128802348
subclass of: SO_0000673
so part of: LOC128802348
location: complement(join(100896..102952,103265..104189))
location: region:100896-104189:-1
so has part: feature:103265-104189:-1:exon
so has part: feature:100896-102952:-1:exon

XP_053824642.1
type: Protein
SIO_000068: ncbiprotein

position:104189:-1
position: 104189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103265-104189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100896-102952:-1:exon

LOC128802349
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802349
note: zinc finger protein 575-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 109290..111788
location: region:109290-111788:1
so has part: feature:109290-111788:1:exon
subclass of: SO_0000010

128802349
type: Gene
SIO_000068: ncbigene

position:109290:1
position: 109290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111788:1
position: 111788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109290-111788:1:exon

LOC128802349
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128802349
product: zinc finger protein 575-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_053968670.1
SIO_010081: LOC128802349
subclass of: SO_0000673
so part of: LOC128802349
location: join(109290..109388,110172..110314,110414..110542,111211..111638,111678..111788)
location: region:109290-111788:1
so has part: feature:109290-109388:1:exon
so has part: feature:110172-110314:1:exon
so has part: feature:110414-110542:1:exon
so has part: feature:111211-111638:1:exon
so has part: feature:111678-111788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109290-109388:1:exon

position:109388:1
position: 109388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110172-110314:1:exon

position:110172:1
position: 110172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110314:1
position: 110314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110414-110542:1:exon

position:110414:1
position: 110414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110542:1
position: 110542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:111211-111638:1:exon

position:111211:1
position: 111211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111638:1
position: 111638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111678-111788:1:exon

position:111678:1
position: 111678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128802349
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128802349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 575-like
translation: MMAAGRGPGQSGGSEDGAFEEEEEEEEEEEEEEEEEEEEEEEAAGAPPAPPDDDDDDDDDDDDDEGSEATSVSSGDSGAPSPPANGCAGARPRPPGEEPRPFPEPPPCGGGEPEPGGAAGSGGGAGGGGGAEWHRCPECGRAFGTSRALKVHRSYHVGRKRPQAAPLPHHPPAAPPPPPPHGPSPFKFHYICAECGLGFAAPGALGAHRCHRGRRRRRRSPPAPPPPPPPPRRAAAPPPFRCTECAGAFGLVAELHEHYMLHARGEL
SIO_010081: LOC128802349
subclass of: SO_0000673
so part of: LOC128802349
location: join(110179..110314,110414..110542,111211..111638,111678..111788)
location: region:110179-111788:1
so has part: feature:110179-110314:1:exon
so has part: feature:110414-110542:1:exon
so has part: feature:111211-111638:1:exon
so has part: feature:111678-111788:1:exon

XP_053824645.1
type: Protein
SIO_000068: ncbiprotein

position:110179:1
position: 110179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110179-110314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110414-110542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111211-111638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111678-111788:1:exon

LOC128802341
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802341
note: zinc finger protein 576-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(112591..114805)
location: region:112591-114805:-1
so has part: feature:112591-114805:-1:exon
subclass of: SO_0000010

128802341
type: Gene
SIO_000068: ncbigene

position:112591:-1
position: 112591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114805:-1
position: 114805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112591-114805:-1:exon

LOC128802341
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128802341
product: zinc finger protein 576-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968664.1
SIO_010081: LOC128802341
subclass of: SO_0000673
so part of: LOC128802341
location: complement(join(112591..113012,114244..114400,114521..114805))
location: region:112591-114805:-1
so has part: feature:114521-114805:-1:exon
so has part: feature:114244-114400:-1:exon
so has part: feature:112591-113012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114521-114805:-1:exon

position:114521:-1
position: 114521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114244-114400:-1:exon

position:114244:-1
position: 114244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114400:-1
position: 114400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:112591-113012:-1:exon

position:113012:-1
position: 113012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128802341
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128802341
product: zinc finger protein 576-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968665.1
SIO_010081: LOC128802341
subclass of: SO_0000673
so part of: LOC128802341
location: complement(join(112591..113012,114244..114441))
location: region:112591-114441:-1
so has part: feature:114244-114441:-1:exon
so has part: feature:112591-113012:-1:exon

position:114441:-1
position: 114441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114244-114441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112591-113012:-1:exon

LOC128802341
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128802341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 576-like
translation: MSQEPPPPPPARPSPPRREEEEEEEEEEEGGGGAPGSPPGQDGVVYRPGSRRCGRCLITFPDAAFAARHAKRQHPRAFAAAALRGALFVCFVCARAFPSSPALLRHQRGHAPSRPPTRPLPPPDTPPRAPPRRGDTPPLSCTECGRGFAREGALHRHYIRHARGEL
SIO_010081: LOC128802341
subclass of: SO_0000673
so part of: LOC128802341
location: complement(join(112648..113012,114244..114379))
location: region:112648-114379:-1
so has part: feature:114244-114379:-1:exon
so has part: feature:112648-113012:-1:exon

XP_053824639.1
type: Protein
SIO_000068: ncbiprotein

position:112648:-1
position: 112648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114379:-1
position: 114379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114244-114379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112648-113012:-1:exon

LOC128802341
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128802341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 576-like
translation: MSQEPPPPPPARPSPPRREEEEEEEEEEEGGGGAPGSPPGQDGVVYRPGSRRCGRCLITFPDAAFAARHAKRQHPRAFAAAALRGALFVCFVCARAFPSSPALLRHQRGHAPSRPPTRPLPPPDTPPRAPPRRGDTPPLSCTECGRGFAREGALHRHYIRHARGEL
SIO_010081: LOC128802341
subclass of: SO_0000673
so part of: LOC128802341
location: complement(join(112648..113012,114244..114379))
location: region:112648-114379:-1
so has part: feature:114244-114379:-1:exon
so has part: feature:112648-113012:-1:exon

XP_053824640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114244-114379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112648-113012:-1:exon

CADM4
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: CADM4
note: cell adhesion molecule 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(115950..131296)
location: region:115950-131296:-1
so has part: feature:115950-131296:-1:exon
subclass of: SO_0000010

128802337
type: Gene
SIO_000068: ncbigene

position:115950:-1
position: 115950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131296:-1
position: 131296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115950-131296:-1:exon

CADM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CADM4
product: cell adhesion molecule 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_053968656.1
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: complement(join(115950..116084,118166..118294,119035..119207,120484..120574,121753..121917,123126..123260,124125..124277,125943..126089,131062..131296))
location: region:115950-131296:-1
so has part: feature:131062-131296:-1:exon
so has part: feature:125943-126089:-1:exon
so has part: feature:124125-124277:-1:exon
so has part: feature:123126-123260:-1:exon
so has part: feature:121753-121917:-1:exon
so has part: feature:120484-120574:-1:exon
so has part: feature:119035-119207:-1:exon
so has part: feature:118166-118294:-1:exon
so has part: feature:115950-116084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131062-131296:-1:exon

position:131062:-1
position: 131062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125943-126089:-1:exon

position:125943:-1
position: 125943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126089:-1
position: 126089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124125-124277:-1:exon

position:124125:-1
position: 124125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124277:-1
position: 124277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123126-123260:-1:exon

position:123126:-1
position: 123126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123260:-1
position: 123260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121753-121917:-1:exon

position:121753:-1
position: 121753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121917:-1
position: 121917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120484-120574:-1:exon

position:120484:-1
position: 120484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120574:-1
position: 120574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119035-119207:-1:exon

position:119035:-1
position: 119035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119207:-1
position: 119207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:118166-118294:-1:exon

position:118166:-1
position: 118166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118294:-1
position: 118294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:115950-116084:-1:exon

position:116084:-1
position: 116084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CADM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 4
translation: MQPPPRAPPALLPGLLLLWAAGHGRAQEVQAENVTVLEGGTAEITCHLHRYDGSIVVIQNPARQTLFFNGTRALKDERFELAEFSRRRLRLRLARARLDDEGGYFCQLYADDTHHQIATLTVLVPPEPPLVEAGALAVEGEELELTCLVPRARPPATLRWYRDRRELPGRSSHRQDGKVFWQRSVLHLRPERRDHGAIVTCEATHPALGRGQRRQTQFQLDVQYPPSARIHPSQSVLREGDTLVLTCAVSGNPRPTEVAWSRGNESLPARARAEGERLTLPALAPQDNGTYTCQVGNAHGRAADAYVLVVYDPGAVVAAQGAGPFAVVGGALALLVFLLLLLLGALVWCSVRQKGSYLTHEASGLEEHGEAREAFLGGEGGKRKEEFFI
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: complement(join(115978..116084,118166..118294,119035..119207,120484..120574,121753..121917,123126..123260,124125..124277,125943..126089,131062..131131))
location: region:115978-131131:-1
so has part: feature:131062-131131:-1:exon
so has part: feature:125943-126089:-1:exon
so has part: feature:124125-124277:-1:exon
so has part: feature:123126-123260:-1:exon
so has part: feature:121753-121917:-1:exon
so has part: feature:120484-120574:-1:exon
so has part: feature:119035-119207:-1:exon
so has part: feature:118166-118294:-1:exon
so has part: feature:115978-116084:-1:exon

XP_053824631.1
type: Protein
SIO_000068: ncbiprotein

position:115978:-1
position: 115978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131131:-1
position: 131131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131062-131131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125943-126089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124125-124277:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123126-123260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121753-121917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120484-120574:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119035-119207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118166-118294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115978-116084:-1:exon

LOC128802350
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802350
note: nephrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 139794..164737
location: region:139794-164737:1
so has part: feature:139794-164737:1:exon
subclass of: SO_0000010

128802350
type: Gene
SIO_000068: ncbigene

position:139794:1
position: 139794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164737:1
position: 164737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139794-164737:1:exon

LOC128802350
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128802350
product: nephrin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053968671.1
SIO_010081: LOC128802350
subclass of: SO_0000673
so part of: LOC128802350
location: join(139794..139853,142561..142594,143184..143375,144297..144413,145508..145636,146549..146630,146762..146865,147474..147592,148438..148606,149555..149712,150733..150859,151650..151774,152443..152620,153526..153658,154776..154948,155545..155679,156385..156525,157846..157967,159057..159231,160467..160632,161198..161514,162256..162367,162830..162993,163492..163661,164106..164169,164264..164316,164528..164737)
location: region:139794-164737:1
so has part: feature:139794-139853:1:exon
so has part: feature:142561-142594:1:exon
so has part: feature:143184-143375:1:exon
so has part: feature:144297-144413:1:exon
so has part: feature:145508-145636:1:exon
so has part: feature:146549-146630:1:exon
so has part: feature:146762-146865:1:exon
so has part: feature:147474-147592:1:exon
so has part: feature:148438-148606:1:exon
so has part: feature:149555-149712:1:exon
so has part: feature:150733-150859:1:exon
so has part: feature:151650-151774:1:exon
so has part: feature:152443-152620:1:exon
so has part: feature:153526-153658:1:exon
so has part: feature:154776-154948:1:exon
so has part: feature:155545-155679:1:exon
so has part: feature:156385-156525:1:exon
so has part: feature:157846-157967:1:exon
so has part: feature:159057-159231:1:exon
so has part: feature:160467-160632:1:exon
so has part: feature:161198-161514:1:exon
so has part: feature:162256-162367:1:exon
so has part: feature:162830-162993:1:exon
so has part: feature:163492-163661:1:exon
so has part: feature:164106-164169:1:exon
so has part: feature:164264-164316:1:exon
so has part: feature:164528-164737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139794-139853:1:exon

position:139853:1
position: 139853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142561-142594:1:exon

position:142561:1
position: 142561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142594:1
position: 142594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143184-143375:1:exon

position:143184:1
position: 143184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143375:1
position: 143375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144297-144413:1:exon

position:144297:1
position: 144297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144413:1
position: 144413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145508-145636:1:exon

position:145508:1
position: 145508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145636:1
position: 145636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:146549-146630:1:exon

position:146549:1
position: 146549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146630:1
position: 146630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:146762-146865:1:exon

position:146762:1
position: 146762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146865:1
position: 146865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:147474-147592:1:exon

position:147474:1
position: 147474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147592:1
position: 147592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148438-148606:1:exon

position:148438:1
position: 148438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148606:1
position: 148606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:149555-149712:1:exon

position:149555:1
position: 149555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149712:1
position: 149712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:150733-150859:1:exon

position:150733:1
position: 150733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150859:1
position: 150859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:151650-151774:1:exon

position:151650:1
position: 151650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151774:1
position: 151774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:152443-152620:1:exon

position:152443:1
position: 152443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152620:1
position: 152620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:153526-153658:1:exon

position:153526:1
position: 153526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153658:1
position: 153658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:154776-154948:1:exon

position:154776:1
position: 154776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154948:1
position: 154948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:155545-155679:1:exon

position:155545:1
position: 155545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155679:1
position: 155679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:156385-156525:1:exon

position:156385:1
position: 156385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156525:1
position: 156525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:157846-157967:1:exon

position:157846:1
position: 157846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157967:1
position: 157967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:159057-159231:1:exon

position:159057:1
position: 159057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159231:1
position: 159231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:160467-160632:1:exon

position:160467:1
position: 160467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160632:1
position: 160632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:161198-161514:1:exon

position:161198:1
position: 161198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161514:1
position: 161514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:162256-162367:1:exon

position:162256:1
position: 162256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162367:1
position: 162367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:162830-162993:1:exon

position:162830:1
position: 162830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162993:1
position: 162993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:163492-163661:1:exon

position:163492:1
position: 163492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163661:1
position: 163661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:164106-164169:1:exon

position:164106:1
position: 164106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164169:1
position: 164169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:164264-164316:1:exon

position:164264:1
position: 164264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164316:1
position: 164316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:164528-164737:1:exon

position:164528:1
position: 164528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128802350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128802350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrin-like
translation: MRSRSRCPCGVSFRPLGGKTAVLALVVIGSCGSAPPAPPFLEEPANGSAALGAGAELRCRTPVGVAVQWARGGLLLGATPTRAHPRYRLVGDPAKGEHHLRIRPVALEDDEAFTCQAGEGNATRASRPAQLSVLVPPSTPQLELLEGAELPLVGGAEVQVRCHAHDARPAPHLELRLGEEPLPDVSSRVFEGSHPKLSSSEATARLTPGPSDHGRLLVCSASNAAGAAPATAGLRLDIAVPPSAPSIEGLPPLVRAGEELRLLCLSRGGRPAPSLHWDKDGVPLAGAWSEDERGVAMTRLVFSPAPEDDGATLRCRAVTSLPGGGASTSVKLQVMYPPAELALQGSAALPEGAEARLSCTSAPSNPPVRLRWWLGGAELQPSGQGPAPGGGAVSNVTLRGRGQDHGSALVCEAETPGLGTKSVTVTVSVSHPPQALWVEAPPPNATFRVGEGLRLLCHARGGHPAPKLTWSKDGRPLADAPPQTRSGHVTSRALHVTATPSDNGAAFRCEAPPTRQGAPPTRSRPVRLRVLFPAQSVSISVSPREPRPGHALSLTCRAGPAHPAPELTWSRPGHAPEAGLPLPPSPAPHGGVTAGSRLLLQGALSLQDQPITCRAWSARLGVAVSSAHILRLRHAPLLSAPSPVLVPEGSEAVLGLSVRAHPPPEGCAWSLRGRGISPEGSPRFRLSPGGALVIANVTRADSAPYRVECHNAEGGASADVTLLVQVPPSIVRAPDPVVVDEGGEGQLLCEAQGSPLPPGSVRWARLGDSGSPQALPPGLEPLPGGAGGSLRVSGARREQGGPYECRVDSGVPPPARAIVRLLVTYGPEMEAEPEEGAGPGVVLVPEGAESATLRCRARGVPGVELSWERNGRSLSTGEPGSPFQELQWREGPWTSSVLRVTNVTGARARLRRLFLLSHHSSQSSQSHRSPRPRYRYQNVPPALPDWEHWEHWEHWEGGNGTVGVFDCVARNERGRARRKLRLQLGDRPEPPRALRLSGLSGTSLSLRWEPGFDGGLPQHFLLRADGPDAPPPPAALVTSGFSLTLGGLRPATPYDVTVHARNARGDSAPVRLRAVTSAVAEAPPPRGEEPEAPPGGAEAPPLLQGALWALGGAALPALGAGLYCCRRFRFRPDAPSPQGSRGPPSAGSAPWEPPKGAEPHLYEEVEPWGGYEEVPPEPLVTPQGELV
SIO_010081: LOC128802350
subclass of: SO_0000673
so part of: LOC128802350
location: join(139794..139853,142561..142594,143184..143375,144297..144413,145508..145636,146549..146630,146762..146865,147474..147592,148438..148606,149555..149712,150733..150859,151650..151774,152443..152620,153526..153658,154776..154948,155545..155679,156385..156525,157846..157967,159057..159231,160467..160632,161198..161514,162256..162367,162830..162993,163492..163661,164106..164169,164264..164316,164528..164572)
location: region:139794-164572:1
so has part: feature:139794-139853:1:exon
so has part: feature:142561-142594:1:exon
so has part: feature:143184-143375:1:exon
so has part: feature:144297-144413:1:exon
so has part: feature:145508-145636:1:exon
so has part: feature:146549-146630:1:exon
so has part: feature:146762-146865:1:exon
so has part: feature:147474-147592:1:exon
so has part: feature:148438-148606:1:exon
so has part: feature:149555-149712:1:exon
so has part: feature:150733-150859:1:exon
so has part: feature:151650-151774:1:exon
so has part: feature:152443-152620:1:exon
so has part: feature:153526-153658:1:exon
so has part: feature:154776-154948:1:exon
so has part: feature:155545-155679:1:exon
so has part: feature:156385-156525:1:exon
so has part: feature:157846-157967:1:exon
so has part: feature:159057-159231:1:exon
so has part: feature:160467-160632:1:exon
so has part: feature:161198-161514:1:exon
so has part: feature:162256-162367:1:exon
so has part: feature:162830-162993:1:exon
so has part: feature:163492-163661:1:exon
so has part: feature:164106-164169:1:exon
so has part: feature:164264-164316:1:exon
so has part: feature:164528-164572:1:exon

XP_053824646.1
type: Protein
SIO_000068: ncbiprotein

position:164572:1
position: 164572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139794-139853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142561-142594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143184-143375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144297-144413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145508-145636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:146549-146630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146762-146865:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147474-147592:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148438-148606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:149555-149712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150733-150859:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151650-151774:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152443-152620:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153526-153658:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:154776-154948:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:155545-155679:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:156385-156525:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157846-157967:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:159057-159231:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:160467-160632:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:161198-161514:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:162256-162367:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:162830-162993:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:163492-163661:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:164106-164169:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:164264-164316:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:164528-164572:1:exon

RBM42
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: RBM42
note: RNA binding motif protein 42; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164864..173111)
location: region:164864-173111:-1
so has part: feature:164864-173111:-1:exon
subclass of: SO_0000010

128802353
type: Gene
SIO_000068: ncbigene

position:164864:-1
position: 164864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173111:-1
position: 173111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164864-173111:-1:exon

RBM42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: RBM42
product: RNA binding motif protein 42, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_053968676.1
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(164864..165164,166743..166937,167790..167910,168664..168849,169388..169543,170056..170231,171793..171877,172464..172566,172947..173111))
location: region:164864-173111:-1
so has part: feature:172947-173111:-1:exon
so has part: feature:172464-172566:-1:exon
so has part: feature:171793-171877:-1:exon
so has part: feature:170056-170231:-1:exon
so has part: feature:169388-169543:-1:exon
so has part: feature:168664-168849:-1:exon
so has part: feature:167790-167910:-1:exon
so has part: feature:166743-166937:-1:exon
so has part: feature:164864-165164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172947-173111:-1:exon

position:172947:-1
position: 172947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172464-172566:-1:exon

position:172464:-1
position: 172464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172566:-1
position: 172566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171793-171877:-1:exon

position:171793:-1
position: 171793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171877:-1
position: 171877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170056-170231:-1:exon

position:170056:-1
position: 170056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170231:-1
position: 170231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:169388-169543:-1:exon

position:169388:-1
position: 169388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169543:-1
position: 169543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168664-168849:-1:exon

position:168664:-1
position: 168664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168849:-1
position: 168849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:167790-167910:-1:exon

position:167790:-1
position: 167790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167910:-1
position: 167910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:166743-166937:-1:exon

position:166743:-1
position: 166743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166937:-1
position: 166937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:164864-165164:-1:exon

position:165164:-1
position: 165164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: RBM42
product: RNA binding motif protein 42, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_053968674.1
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(164865..165164,166743..166937,167790..167910,168664..168849,169388..169543,170056..170231,171110..171175,171793..171877,172464..172566,172947..173111))
location: region:164865-173111:-1
so has part: feature:172947-173111:-1:exon
so has part: feature:172464-172566:-1:exon
so has part: feature:171793-171877:-1:exon
so has part: feature:171110-171175:-1:exon
so has part: feature:170056-170231:-1:exon
so has part: feature:169388-169543:-1:exon
so has part: feature:168664-168849:-1:exon
so has part: feature:167790-167910:-1:exon
so has part: feature:166743-166937:-1:exon
so has part: feature:164865-165164:-1:exon

position:164865:-1
position: 164865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172947-173111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172464-172566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171793-171877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171110-171175:-1:exon

position:171110:-1
position: 171110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171175:-1
position: 171175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170056-170231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169388-169543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168664-168849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167790-167910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166743-166937:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:164865-165164:-1:exon

RBM42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: RBM42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 42 isoform X3
translation: MAAGAGPGAAVVAAGPGPGPGAAAGAGGAAVKSGEERLKEMEAEMALFEQEVLGAPGPAPGDPLAPPPVLRPIIATNTYQQVQQSLEARAAAAATVPPLGTPPVPFVGPAGPRGPLGLRPPPGAMVGVGPPLGAPPAPPLLLAPPPLQRPPPTPLGAPLGGALRAAGPAGGGGAPVPPLPPVAAGPRVAPPGPPPGPPKPTPPVIQAAPTVYPTPPRRAPEETPPPRAPPPEEPRIGPSLPAPPPAMATPPPEPRPGPAHMAPVPRPLRRPRPQDPPFPVPEVGAEPAAEDKRKGRGERLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDETLGRAFGRFPSFLKAKVIRDKRSGKTKGYGFVSFKDPNDYVRAMREMNGKYVGSRPIKLRKSQWKDRNLEVVRRKQREKKKLGLR
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(165052..165164,166743..166937,167790..167910,168664..168849,169388..169543,170056..170231,171793..171877,172464..172566,172947..173086))
location: region:165052-173086:-1
so has part: feature:172947-173086:-1:exon
so has part: feature:172464-172566:-1:exon
so has part: feature:171793-171877:-1:exon
so has part: feature:170056-170231:-1:exon
so has part: feature:169388-169543:-1:exon
so has part: feature:168664-168849:-1:exon
so has part: feature:167790-167910:-1:exon
so has part: feature:166743-166937:-1:exon
so has part: feature:165052-165164:-1:exon

XP_053824651.1
type: Protein
SIO_000068: ncbiprotein

position:165052:-1
position: 165052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173086:-1
position: 173086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172947-173086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172464-172566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171793-171877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170056-170231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169388-169543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168664-168849:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167790-167910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166743-166937:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165052-165164:-1:exon

RBM42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: RBM42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 42 isoform X1
translation: MAAGAGPGAAVVAAGPGPGPGAAAGAGGAAVKSGEERLKEMEAEMALFEQEVLGAPGPAPGDPLAPPPVLRPIIATNTYQQVQQSLEARAAAAATVPPLGTPPVPFVGPAVSPQRPPILRPAFVPHVLQRPAGPRGPLGLRPPPGAMVGVGPPLGAPPAPPLLLAPPPLQRPPPTPLGAPLGGALRAAGPAGGGGAPVPPLPPVAAGPRVAPPGPPPGPPKPTPPVIQAAPTVYPTPPRRAPEETPPPRAPPPEEPRIGPSLPAPPPAMATPPPEPRPGPAHMAPVPRPLRRPRPQDPPFPVPEVGAEPAAEDKRKGRGERLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDETLGRAFGRFPSFLKAKVIRDKRSGKTKGYGFVSFKDPNDYVRAMREMNGKYVGSRPIKLRKSQWKDRNLEVVRRKQREKKKLGLR
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(165052..165164,166743..166937,167790..167910,168664..168849,169388..169543,170056..170231,171110..171175,171793..171877,172464..172566,172947..173086))
location: region:165052-173086:-1
so has part: feature:172947-173086:-1:exon
so has part: feature:172464-172566:-1:exon
so has part: feature:171793-171877:-1:exon
so has part: feature:171110-171175:-1:exon
so has part: feature:170056-170231:-1:exon
so has part: feature:169388-169543:-1:exon
so has part: feature:168664-168849:-1:exon
so has part: feature:167790-167910:-1:exon
so has part: feature:166743-166937:-1:exon
so has part: feature:165052-165164:-1:exon

XP_053824649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172947-173086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172464-172566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171793-171877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171110-171175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170056-170231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169388-169543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168664-168849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167790-167910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166743-166937:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165052-165164:-1:exon

RBM42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: RBM42
product: RNA binding motif protein 42, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053968675.1
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(165173..165363,166743..166937,167790..167910,168664..168849,169388..169543,170056..170231,171110..171175,171793..171877,172464..172566,172947..173111))
location: region:165173-173111:-1
so has part: feature:172947-173111:-1:exon
so has part: feature:172464-172566:-1:exon
so has part: feature:171793-171877:-1:exon
so has part: feature:171110-171175:-1:exon
so has part: feature:170056-170231:-1:exon
so has part: feature:169388-169543:-1:exon
so has part: feature:168664-168849:-1:exon
so has part: feature:167790-167910:-1:exon
so has part: feature:166743-166937:-1:exon
so has part: feature:165173-165363:-1:exon

position:165173:-1
position: 165173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172947-173111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172464-172566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171793-171877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171110-171175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170056-170231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169388-169543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168664-168849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167790-167910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166743-166937:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165173-165363:-1:exon

position:165363:-1
position: 165363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: RBM42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 42 isoform X2
translation: MAAGAGPGAAVVAAGPGPGPGAAAGAGGAAVKSGEERLKEMEAEMALFEQEVLGAPGPAPGDPLAPPPVLRPIIATNTYQQVQQSLEARAAAAATVPPLGTPPVPFVGPAVSPQRPPILRPAFVPHVLQRPAGPRGPLGLRPPPGAMVGVGPPLGAPPAPPLLLAPPPLQRPPPTPLGAPLGGALRAAGPAGGGGAPVPPLPPVAAGPRVAPPGPPPGPPKPTPPVIQAAPTVYPTPPRRAPEETPPPRAPPPEEPRIGPSLPAPPPAMATPPPEPRPGPAHMAPVPRPLRRPRPQDPPFPVPEVGAEPAAEDKRKGRGERLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDETLGRAFGRFPSFLKAKVIRDKRSGKTKGYGFVSFKDPNDYVRAMREMNGKYVGSRRSECLPVPPSLSQSPLRCSQCSQ
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(165272..165363,166743..166937,167790..167910,168664..168849,169388..169543,170056..170231,171110..171175,171793..171877,172464..172566,172947..173086))
location: region:165272-173086:-1
so has part: feature:172947-173086:-1:exon
so has part: feature:172464-172566:-1:exon
so has part: feature:171793-171877:-1:exon
so has part: feature:171110-171175:-1:exon
so has part: feature:170056-170231:-1:exon
so has part: feature:169388-169543:-1:exon
so has part: feature:168664-168849:-1:exon
so has part: feature:167790-167910:-1:exon
so has part: feature:166743-166937:-1:exon
so has part: feature:165272-165363:-1:exon

XP_053824650.1
type: Protein
SIO_000068: ncbiprotein

position:165272:-1
position: 165272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172947-173086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172464-172566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171793-171877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171110-171175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170056-170231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169388-169543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168664-168849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167790-167910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166743-166937:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165272-165363:-1:exon

TYROBP
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: TYROBP
note: transmembrane immune signaling adaptor TYROBP; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(173267..175852)
location: region:173267-175852:-1
so has part: feature:173267-175852:-1:exon
subclass of: SO_0000010

128802355
type: Gene
SIO_000068: ncbigene

position:173267:-1
position: 173267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175852:-1
position: 175852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173267-175852:-1:exon

TYROBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TYROBP
product: transmembrane immune signaling adaptor TYROBP, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968678.1
SIO_010081: TYROBP
subclass of: SO_0000673
so part of: TYROBP
location: complement(join(173267..173419,174877..174993,175091..175111,175652..175852))
location: region:173267-175852:-1
so has part: feature:175652-175852:-1:exon
so has part: feature:175091-175111:-1:exon
so has part: feature:174877-174993:-1:exon
so has part: feature:173267-173419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175652-175852:-1:exon

position:175652:-1
position: 175652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175091-175111:-1:exon

position:175091:-1
position: 175091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175111:-1
position: 175111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174877-174993:-1:exon

position:174877:-1
position: 174877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174993:-1
position: 174993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173267-173419:-1:exon

position:173419:-1
position: 173419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTU1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: CTU1
note: cytosolic thiouridylase subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 173291..181186
location: region:173291-181186:1
so has part: feature:173291-181186:1:exon
subclass of: SO_0000010

128802351
type: Gene
SIO_000068: ncbigene

position:173291:1
position: 173291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181186:1
position: 181186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173291-181186:1:exon

CTU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CTU1
product: cytosolic thiouridylase subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_053968672.1
SIO_010081: CTU1
subclass of: SO_0000673
so part of: CTU1
location: join(173291..173378,176019..176265,177527..178865,179696..181043,181150..181186)
location: region:173291-181186:1
so has part: feature:173291-173378:1:exon
so has part: feature:176019-176265:1:exon
so has part: feature:177527-178865:1:exon
so has part: feature:179696-181043:1:exon
so has part: feature:181150-181186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173291-173378:1:exon

position:173378:1
position: 173378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176019-176265:1:exon

position:176019:1
position: 176019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176265:1
position: 176265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:177527-178865:1:exon

position:177527:1
position: 177527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178865:1
position: 178865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:179696-181043:1:exon

position:179696:1
position: 179696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181043:1
position: 181043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181150-181186:1:exon

position:181150:1
position: 181150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TYROBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TYROBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TYRO protein tyrosine kinase-binding protein isoform X2
translation: MAPPGTLGLLLLLLLLGAAAAQPECSGCLPGPGPIAALVAADVILTLLIAGGAYWLAGRGRPAPPKPRPPEQDSPYQELQGVRGDVYSVLKR
SIO_010081: TYROBP
subclass of: SO_0000673
so part of: TYROBP
location: complement(join(173328..173419,174877..174993,175091..175111,175652..175700))
location: region:173328-175700:-1
so has part: feature:175652-175700:-1:exon
so has part: feature:175091-175111:-1:exon
so has part: feature:174877-174993:-1:exon
so has part: feature:173328-173419:-1:exon

XP_053824653.1
type: Protein
SIO_000068: ncbiprotein

position:173328:-1
position: 173328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175700:-1
position: 175700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175652-175700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175091-175111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174877-174993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173328-173419:-1:exon

TYROBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TYROBP
product: transmembrane immune signaling adaptor TYROBP, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053968677.1
SIO_010081: TYROBP
subclass of: SO_0000673
so part of: TYROBP
location: complement(join(174179..174993,175091..175111,175652..175852))
location: region:174179-175852:-1
so has part: feature:175652-175852:-1:exon
so has part: feature:175091-175111:-1:exon
so has part: feature:174179-174993:-1:exon

position:174179:-1
position: 174179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175652-175852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175091-175111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174179-174993:-1:exon

TYROBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TYROBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TYRO protein tyrosine kinase-binding protein isoform X1
translation: MAPPGTLGLLLLLLLLGAAAAQPECSGCLPGPGPIAALVAADVILTLLIAGGAYWLAGRGRPGGRGQRGGVNFGRGQRGMGFLVGVAKEGGVVCGRGLTWGCVCGRGQRGEAVCGRGQLERDCFWAWPKGLVIGRG
SIO_010081: TYROBP
subclass of: SO_0000673
so part of: TYROBP
location: complement(join(174653..174993,175091..175111,175652..175700))
location: region:174653-175700:-1
so has part: feature:175652-175700:-1:exon
so has part: feature:175091-175111:-1:exon
so has part: feature:174653-174993:-1:exon

XP_053824652.1
type: Protein
SIO_000068: ncbiprotein

position:174653:-1
position: 174653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175652-175700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175091-175111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174653-174993:-1:exon

CTU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CTU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic tRNA 2-thiolation protein 1
translation: MAPPRCSRCPLPSALLRSRSLLPFCRRCFLSAFEAETLQALLQPGPGLPPRNLGVEPQKSGLEPQNPGVEPQKSGVEPPNPGVEPQNPRNPGLPPRNLGVEPQKSGVPSQNHGVEPQNPGVEPQNLRNPGLPPQNPGVTPQNPGMEPQNPGVEPQKSGLEPQNLQNPGNPPQNPQVEPQNLQNPGVPSQNPGVTPQKSGVEPQNPGMEPQNPGVPSQTSVISPQNPLISPQDSGISPQNPPISPQNPPISPQDFGISPQNSGISPENPGISPQNPGISPWNSPISPQDSGISPQNPGISPQNFGISPQNPGISPRHPGPSPSPAPRRRPRPGDAVAVAASGGKDSTVLAHVLARLGRRLGLRLALLAVDEGIAGYRDAALRVLRAAGAALPLPLAVVSHRELFGWAVDQLGPALGRRSRCTVCGVFRRHALERAAREMGADWIATGHNADDVAETVLMNFLRGDVARLRRAANEAWGATNEATVATNGNEAWGATQGPTAATDEALGATTDANGATDVSGATDEATTAANRTVATSEVSGATNEAFTVSEAAVATNAVNAANDSNEATNEVAVATKEATVATRSSREVPPPSVASSGPTEANDGQRKLVGEPRDCPRNPTEFHENPTGILGNSTRPNQNPTKPNGNSMKVNETPTKPNENPTERNKTSTEPNENPTKPSENSTKPLENTTEPNKNPTKPNKMSMKPNESPTKLNEDPRKPNENSTKPNENPTNPNANPTKPNRNPRKPNRDPTKPAKPSRKPSAAAPWPTVPRLKPLRHASQKEIVLYAHFLGLPYASAECRHAPLAFRGHPRALLKELEAARPAAVAALAHSGRRLALGAAPGAGAAPGACGRCGAVASGELCMACVLLAALDRGRPKLALGKRGLRVATEGGRMRVVATGGEVI
SIO_010081: CTU1
subclass of: SO_0000673
so part of: CTU1
location: join(177530..178865,179696..181043,181150..181186)
location: region:177530-181186:1
so has part: feature:177530-178865:1:exon
so has part: feature:179696-181043:1:exon
so has part: feature:181150-181186:1:exon

XP_053824647.1
type: Protein
SIO_000068: ncbiprotein

position:177530:1
position: 177530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177530-178865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179696-181043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181150-181186:1:exon

LOC128802356
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802356
note: synaptophysin-like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182478..189569
location: region:182478-189569:1
so has part: feature:182478-189569:1:exon
subclass of: SO_0000010

128802356
type: Gene
SIO_000068: ncbigene

position:182478:1
position: 182478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189569:1
position: 189569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182478-189569:1:exon

LOC128802356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128802356
product: synaptophysin-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_053968679.1
SIO_010081: LOC128802356
subclass of: SO_0000673
so part of: LOC128802356
location: join(182478..182585,183791..183909,184920..185130,186528..186704,187193..189569)
location: region:182478-189569:1
so has part: feature:182478-182585:1:exon
so has part: feature:183791-183909:1:exon
so has part: feature:184920-185130:1:exon
so has part: feature:186528-186704:1:exon
so has part: feature:187193-189569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182478-182585:1:exon

position:182585:1
position: 182585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183791-183909:1:exon

position:183791:1
position: 183791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183909:1
position: 183909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184920-185130:1:exon

position:184920:1
position: 184920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185130:1
position: 185130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186528-186704:1:exon

position:186528:1
position: 186528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186704:1
position: 186704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187193-189569:1:exon

position:187193:1
position: 187193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128802356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128802356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 1
translation: MAAPRVSLGALKEPLGLNRGLQWFFSIFAFATCGAFEGSVTFRVTCAGLENGSVSAAFAYPFRLNQAVFQPSLTHLCNHTWPRDVHLVGDFSSAARFFVGVAVAAFLYSLGALGGYLGYLHLYRCAGSRLPLADLVASGLVAALWLVASSAWAQGLGHVRAAVAAPLPHCPSPNVHCVHAGVTPMGSLGASVAFGFLNLLLWAGGCWFIYKETPLHRPAPPPDPAPSPM
SIO_010081: LOC128802356
subclass of: SO_0000673
so part of: LOC128802356
location: join(182517..182585,183791..183909,184920..185130,186528..186704,187193..187306)
location: region:182517-187306:1
so has part: feature:182517-182585:1:exon
so has part: feature:183791-183909:1:exon
so has part: feature:184920-185130:1:exon
so has part: feature:186528-186704:1:exon
so has part: feature:187193-187306:1:exon

XP_053824654.1
type: Protein
SIO_000068: ncbiprotein

position:182517:1
position: 182517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187306:1
position: 187306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182517-182585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183791-183909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184920-185130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186528-186704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187193-187306:1:exon

LOC128802352
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128802352
note: uncharacterized LOC128802352; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(192680..206398)
location: region:192680-206398:-1
so has part: feature:192680-206398:-1:exon
subclass of: SO_0000010

128802352
type: Gene
SIO_000068: ncbigene

position:192680:-1
position: 192680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206398:-1
position: 206398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192680-206398:-1:exon

LOC128802352
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128802352
product: uncharacterized LOC128802352
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_053968673.1
SIO_010081: LOC128802352
subclass of: SO_0000673
so part of: LOC128802352
location: complement(join(192680..192895,193533..193669,194655..194908,196567..196951,197731..197962,199062..199170,201934..202093,202935..203471,205895..206115,206334..206398))
location: region:192680-206398:-1
so has part: feature:206334-206398:-1:exon
so has part: feature:205895-206115:-1:exon
so has part: feature:202935-203471:-1:exon
so has part: feature:201934-202093:-1:exon
so has part: feature:199062-199170:-1:exon
so has part: feature:197731-197962:-1:exon
so has part: feature:196567-196951:-1:exon
so has part: feature:194655-194908:-1:exon
so has part: feature:193533-193669:-1:exon
so has part: feature:192680-192895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206334-206398:-1:exon

position:206334:-1
position: 206334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205895-206115:-1:exon

position:205895:-1
position: 205895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206115:-1
position: 206115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202935-203471:-1:exon

position:202935:-1
position: 202935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203471:-1
position: 203471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201934-202093:-1:exon

position:201934:-1
position: 201934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202093:-1
position: 202093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199062-199170:-1:exon

position:199062:-1
position: 199062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199170:-1
position: 199170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:197731-197962:-1:exon

position:197731:-1
position: 197731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197962:-1
position: 197962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196567-196951:-1:exon

position:196567:-1
position: 196567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196951:-1
position: 196951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:194655-194908:-1:exon

position:194655:-1
position: 194655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194908:-1
position: 194908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:193533-193669:-1:exon

position:193533:-1
position: 193533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193669:-1
position: 193669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:192680-192895:-1:exon

position:192895:-1
position: 192895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128802352
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128802352
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128802352
translation: MAALRQFPDTFGSFRPSSGSVRSAQFSPVWAQFSVSGPLSPLPGPWAPPPPQEEDEEEEGEEEEPGTGRRSRFKAWPDPQAGPLRFRFGSASALFVLPSIFTHFPPVLNFCGFFFPRISQTPPPKFSAFRGVSLDGRGQNALWAWPHPQRACPRRRGRGLREVGVAPVFLGIPRALPLPRRLRRGPKSEGGSPKSGTPRWPRSCPWICARGAPKIPPNPPKNAAPPPPPKLRCRSGSAARFWGGEAPKFWGKPPRTPKFGHPQLEKTPKFGIGTGLRAEPPLPFLGAGGILGVPPAPILGSPNLGVPPEPPLAAAIAAATRQDEDGDTPLHIAVAQGAVAVARRLVALFLRGGRDLDVYNHLRQTPLHLAVITGQVALVRLLVAHGASPMAPDRLGRTCAHLACGSHLPGGGATAGPRPRVLRELLRSPGPPPDLQARDYEGPHTWWPRCHSRWQCPHTCWPRCHSGWQCPHTCWPRCHSGWQCPRAGASPAVPPSVPPAGATVCQPPPCPPGQRVTCEPQDGEDVRVIGGYPCLPLSQPWQVLLYGPLRCGGVLLRPLWVLTAAHCAKRGLRVRLGEDDLTRREGTEQERRVALAVTHPRFDPATLDNDLALLRLDRPAAIGRGVRPLALPRACAPAGASCLLSGWGTVTTPQVTLPNRLICAYVQVLSDAACRRAYPQRITPSMLCAGVRNRRVDSCQGDSGGPLSCNGTLQGVVSWGLQTCALPGHPGVYTKVCEFVSWIQDTMDST
SIO_010081: LOC128802352
subclass of: SO_0000673
so part of: LOC128802352
location: complement(join(192743..192895,193533..193669,194655..194908,196567..196951,197731..197962,199062..199170,201934..202093,202935..203471,205895..206115,206334..206398))
location: region:192743-206398:-1
so has part: feature:206334-206398:-1:exon
so has part: feature:205895-206115:-1:exon
so has part: feature:202935-203471:-1:exon
so has part: feature:201934-202093:-1:exon
so has part: feature:199062-199170:-1:exon
so has part: feature:197731-197962:-1:exon
so has part: feature:196567-196951:-1:exon
so has part: feature:194655-194908:-1:exon
so has part: feature:193533-193669:-1:exon
so has part: feature:192743-192895:-1:exon

XP_053824648.1
type: Protein
SIO_000068: ncbiprotein

position:192743:-1
position: 192743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206334-206398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205895-206115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202935-203471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201934-202093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199062-199170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197731-197962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196567-196951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194655-194908:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193533-193669:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192743-192895:-1:exon

SCN1B
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: SCN1B
note: sodium voltage-gated channel beta subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205752..213359
location: region:205752-213359:1
so has part: feature:205752-213359:1:exon
subclass of: SO_0000010

128802357
type: Gene
SIO_000068: ncbigene

position:205752:1
position: 205752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213359:1
position: 213359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205752-213359:1:exon

SCN1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053968681.1
SIO_010081: SCN1B
subclass of: SO_0000673
so part of: SCN1B
location: join(205752..206430,208023..208189,209276..209516,210860..210995,211683..213359)
location: region:205752-213359:1
so has part: feature:205752-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-213359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205752-206430:1:exon

position:206430:1
position: 206430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

position:208023:1
position: 208023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208189:1
position: 208189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

position:209276:1
position: 209276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209516:1
position: 209516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

position:210860:1
position: 210860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210995:1
position: 210995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:211683-213359:1:exon

position:211683:1
position: 211683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008435377.1
SIO_010081: SCN1B
so part of: SCN1B
location: join(205757..206430,208023..208189,209276..209516,210860..210995,211683..212185,212217..213359)
location: region:205757-213359:1
so has part: feature:205757-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-212185:1:exon
so has part: feature:212217-213359:1:exon

position:205757:1
position: 205757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205757-206430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211683-212185:1:exon

position:212185:1
position: 212185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212217-213359:1:exon

position:212217:1
position: 212217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008435379.1
SIO_010081: SCN1B
so part of: SCN1B
location: join(205757..206430,208023..208189,209276..209516,210860..210995,211683..212147,212208..213359)
location: region:205757-213359:1
so has part: feature:205757-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-212147:1:exon
so has part: feature:212208-213359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205757-206430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211683-212147:1:exon

position:212147:1
position: 212147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212208-213359:1:exon

position:212208:1
position: 212208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008435378.1
SIO_010081: SCN1B
so part of: SCN1B
location: join(205757..206430,208023..208189,209276..209516,210860..210995,211683..212125,212208..213359)
location: region:205757-213359:1
so has part: feature:205757-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-212125:1:exon
so has part: feature:212208-213359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205757-206430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211683-212125:1:exon

position:212125:1
position: 212125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212208-213359:1:exon

SCN1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008435381.1
SIO_010081: SCN1B
so part of: SCN1B
location: join(205757..206430,208023..208189,209276..209516,210860..210995,211683..212031,212138..213359)
location: region:205757-213359:1
so has part: feature:205757-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-212031:1:exon
so has part: feature:212138-213359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205757-206430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211683-212031:1:exon

position:212031:1
position: 212031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212138-213359:1:exon

position:212138:1
position: 212138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008435382.1
SIO_010081: SCN1B
so part of: SCN1B
location: join(205757..206430,208023..208189,209276..209516,210860..210995,211683..211924,211994..212031,212138..213359)
location: region:205757-213359:1
so has part: feature:205757-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-211924:1:exon
so has part: feature:211994-212031:1:exon
so has part: feature:212138-213359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205757-206430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211683-211924:1:exon

position:211924:1
position: 211924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211994-212031:1:exon

position:211994:1
position: 211994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212138-213359:1:exon

SCN1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008435380.1
SIO_010081: SCN1B
so part of: SCN1B
location: join(205757..206430,208023..208189,209276..209516,210860..210995,211683..211903,211963..213359)
location: region:205757-213359:1
so has part: feature:205757-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-211903:1:exon
so has part: feature:211963-213359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205757-206430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211683-211903:1:exon

position:211903:1
position: 211903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211963-213359:1:exon

position:211963:1
position: 211963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SCN1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel subunit beta-1
translation: MLLSLLLGLLEVSGALGGCVEVASGTEAVLGAPFRLLCIACKRRSETPAEAESEWFFRPEGAPQFEKILHYSPEEGEWVAPGPFLGVLSWNGSRGTRDLQDLSVWLQAVQHGHAGHYVCRLKRNLTFEGYTYSLARNQTLRLAVVEKARRDLASIVSEILMYVLIVVLTLWLAAEMLYCYRKVAAAAPPPDSASEYLAITSESKENCGGPAATE
SIO_010081: SCN1B
subclass of: SO_0000673
so part of: SCN1B
location: join(206397..206430,208023..208189,209276..209516,210860..210995,211683..211749)
location: region:206397-211749:1
so has part: feature:206397-206430:1:exon
so has part: feature:208023-208189:1:exon
so has part: feature:209276-209516:1:exon
so has part: feature:210860-210995:1:exon
so has part: feature:211683-211749:1:exon

XP_053824656.1
type: Protein
SIO_000068: ncbiprotein

position:206397:1
position: 206397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211749:1
position: 211749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206397-206430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208023-208189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209276-209516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210860-210995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211683-211749:1:exon