Vidua chalybeata isolate OUT-0048 chromosome 39, bVidCha1 merged haplotype, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Viduinae; Vidua.
REFSEQ INFORMATION: The reference sequence is identical to\nCM049564.1.\nAssembly name: bVidCha1 merged haplotype\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/12/21. The original whole-genome shotgun project has the\naccession JAPVQZ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-NOV-2021\nAssembly Method :: canu v. 2.1; merfin v. 1.0; purgedups v.\n 1.2.5; salsa v. 2.2\nAssembly Name :: bVidCha1 merged haplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 55.0x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026979565.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/03/2023\n##Genome-Annotation-Data-END##
electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon.
electron transfer flavoprotein subunit beta, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
electron transfer flavoprotein subunit beta, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon.
electron transfer flavoprotein subunit beta
protein phosphatase 2 scaffold subunit Aalpha; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 2 scaffold subunit Aalpha
serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
uncharacterized LOC128802345; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802345, transcript variant X2
uncharacterized LOC128802345, transcript variant X1
uncharacterized LOC128802346; Derived by automated computational analysis using gene prediction method: Gnomon.
SMG9 nonsense mediated mRNA decay factor; Derived by automated computational analysis using gene prediction method: Gnomon.
SMG9 nonsense mediated mRNA decay factor
nonsense-mediated mRNA decay factor SMG9
uncharacterized LOC128802347; Derived by automated computational analysis using gene prediction method: Gnomon.
X-ray repair cross complementing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802343; Derived by automated computational analysis using gene prediction method: Gnomon.
ETHE1 persulfide dioxygenase; Derived by automated computational analysis using gene prediction method: Gnomon.
ETHE1 persulfide dioxygenase, transcript variant X2
ETHE1 persulfide dioxygenase, transcript variant X1
persulfide dioxygenase ETHE1, mitochondrial isoform X1
persulfide dioxygenase ETHE1, mitochondrial isoform X2
pleckstrin homology like domain family B member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology like domain family B member 3, transcript variant X1
pleckstrin homology like domain family B member 3, transcript variant X2
pleckstrin homology like domain family B member 3, transcript variant X3
pleckstrin homology-like domain family B member 3 isoform X1
pleckstrin homology-like domain family B member 3 isoform X2
pleckstrin homology-like domain family B member 3 isoform X3
LY6/PLAUR domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
LY6/PLAUR domain containing 3, transcript variant X3
LY6/PLAUR domain containing 3, transcript variant X2
LY6/PLAUR domain containing 3, transcript variant X1
ly6/PLAUR domain-containing protein 3 isoform X3
ly6/PLAUR domain-containing protein 3 isoform X2
ly6/PLAUR domain-containing protein 3 isoform X1
mucin-5AC-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 575-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
zinc finger protein 576-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 576-like, transcript variant X1
zinc finger protein 576-like, transcript variant X2
cell adhesion molecule 4; Derived by automated computational analysis using gene prediction method: Gnomon.
nephrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA binding motif protein 42; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA binding motif protein 42, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
RNA binding motif protein 42, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
RNA binding motif protein 42, transcript variant X2
transmembrane immune signaling adaptor TYROBP; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane immune signaling adaptor TYROBP, transcript variant X2
cytosolic thiouridylase subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
TYRO protein tyrosine kinase-binding protein isoform X2
transmembrane immune signaling adaptor TYROBP, transcript variant X1
TYRO protein tyrosine kinase-binding protein isoform X1
synaptophysin-like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128802352; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
sodium voltage-gated channel beta subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 1, transcript variant X7
sodium voltage-gated channel beta subunit 1, transcript variant X1
sodium voltage-gated channel beta subunit 1, transcript variant X3
sodium voltage-gated channel beta subunit 1, transcript variant X2
sodium voltage-gated channel beta subunit 1, transcript variant X5
sodium voltage-gated channel beta subunit 1, transcript variant X6
sodium voltage-gated channel beta subunit 1, transcript variant X4