Vidua chalybeata isolate OUT-0048 chromosome 12, bVidCha1 merged haplotype, whole genome shotgun sequence.
type: Entry
definition: Vidua chalybeata isolate OUT-0048 chromosome 12, bVidCha1 merged haplotype, whole genome shotgun sequence.
sequence version: NC_071541.1
sequence date: 2023-03-06
sequence: sequence
division: CON
label: NC_071541.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA940449
dblink: SAMN12254000
keyword: WGS
keyword: RefSeq
source: Vidua chalybeata
organism: Vidua chalybeata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Viduinae; Vidua.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM049537.1.\nAssembly name: bVidCha1 merged haplotype\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/12/21. The original whole-genome shotgun project has the\naccession JAPVQZ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-NOV-2021\nAssembly Method :: canu v. 2.1; merfin v. 1.0; purgedups v.\n 1.2.5; salsa v. 2.2\nAssembly Name :: bVidCha1 merged haplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 55.0x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026979565.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/03/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21230624
topology: linear
so has quality: SO_0000987
location: 1..21230624
location: region:1-21230624:1
RO_0002162: 81927

NC_071541
type: RefSeq
SIO_000068: refseq

PRJNA940449
type: BioProject
SIO_000068: bioproject

SAMN12254000
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21230624:1
position: 21230624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21230624:1:source
so part of: sequence
organism: Vidua chalybeata
mol type: genomic DNA
isolate: OUT-0048
specimen voucher: MSB:Bird:30254
chromosome: 12
sex: female
tissue type: muscle
country: South Africa
lat lon: 28.04 S 26.29 E
collection date: 2011-01-16

81927
type: Taxonomy
SIO_000068: taxonomy

LOC128794392
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794392
note: uncharacterized LOC128794392; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6418..11817)
location: region:6418-11817:-1
so has part: feature:6418-11817:-1:exon
subclass of: SO_0000010

128794392
type: Gene
SIO_000068: ncbigene

position:6418:-1
position: 6418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11817:-1
position: 11817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6418-11817:-1:exon

LOC128794392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794392
product: uncharacterized LOC128794392, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053954195.1
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(6418..8115,8269..8351,9882..9922,10004..10047,10311..10352,10429..10491,11415..11506,11587..11817))
location: region:6418-11817:-1
so has part: feature:11587-11817:-1:exon
so has part: feature:11415-11506:-1:exon
so has part: feature:10429-10491:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:8269-8351:-1:exon
so has part: feature:6418-8115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11587-11817:-1:exon

position:11587:-1
position: 11587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11415-11506:-1:exon

position:11415:-1
position: 11415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11506:-1
position: 11506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10429-10491:-1:exon

position:10429:-1
position: 10429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10491:-1
position: 10491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10311-10352:-1:exon

position:10311:-1
position: 10311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10352:-1
position: 10352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10004-10047:-1:exon

position:10004:-1
position: 10004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10047:-1
position: 10047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9882-9922:-1:exon

position:9882:-1
position: 9882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9922:-1
position: 9922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8269-8351:-1:exon

position:8269:-1
position: 8269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8351:-1
position: 8351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6418-8115:-1:exon

position:8115:-1
position: 8115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794392
product: uncharacterized LOC128794392, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053954196.1
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(6418..8115,8269..8351,9882..9922,10004..10047,10311..10352,10429..10491,11415..11506,11587..11666,11750..11798))
location: region:6418-11798:-1
so has part: feature:11750-11798:-1:exon
so has part: feature:11587-11666:-1:exon
so has part: feature:11415-11506:-1:exon
so has part: feature:10429-10491:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:8269-8351:-1:exon
so has part: feature:6418-8115:-1:exon

position:11798:-1
position: 11798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11750-11798:-1:exon

position:11750:-1
position: 11750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11587-11666:-1:exon

position:11666:-1
position: 11666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11415-11506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10429-10491:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8269-8351:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6418-8115:-1:exon

LOC128794392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794392
product: uncharacterized LOC128794392, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053954194.1
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(6418..8115,8269..8351,9882..9922,10004..10047,10311..10352,10429..11353))
location: region:6418-11353:-1
so has part: feature:10429-11353:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:8269-8351:-1:exon
so has part: feature:6418-8115:-1:exon

position:11353:-1
position: 11353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10429-11353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8269-8351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6418-8115:-1:exon

LOC128794392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794392
product: uncharacterized LOC128794392, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053954198.1
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(6418..8351,9882..9922,10004..10047,10311..10352,10429..11353))
location: region:6418-11353:-1
so has part: feature:10429-11353:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:6418-8351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10429-11353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6418-8351:-1:exon

LOC128794392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794392
product: uncharacterized LOC128794392, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053954197.1
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(6418..9800,9882..9922,10004..10047,10311..10352,10429..11353))
location: region:6418-11353:-1
so has part: feature:10429-11353:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:6418-9800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10429-11353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6418-9800:-1:exon

position:9800:-1
position: 9800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794392
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: LOC128794392
product: uncharacterized LOC128794392, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433078.1
SIO_010081: LOC128794392
so part of: LOC128794392
location: complement(join(6418..9800,9882..9922,10004..10047,10151..10196,10311..10352,10429..11353))
location: region:6418-11353:-1
so has part: feature:10429-11353:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10151-10196:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:6418-9800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10429-11353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10151-10196:-1:exon

position:10151:-1
position: 10151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10196:-1
position: 10196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6418-9800:-1:exon

LOC128794392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128794392 isoform X1
translation: MVFLDSYRMLGPVKLSYSCLNFLLTFFQMQTFKICGRAPLPGQGVFPEKEVQADSCSQGQVCKVSLLPSACEGTESSGYPPGSLLSRIKISGPRVSTSYPGIYRRTSKSRGQKTRRSVNVFQLIFKFRIKNPQPGGFFFFPPAGFFFSSVPAGPRGDVHRQSSEADRPGTGVFVRQENFFGRSREPRSRGASCMRVDGRGSEERLRRERGWVCA
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(7828..8115,8269..8351,9882..9922,10004..10047,10311..10352,10429..10575))
location: region:7828-10575:-1
so has part: feature:10429-10575:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:8269-8351:-1:exon
so has part: feature:7828-8115:-1:exon

XP_053810169.1
type: Protein
SIO_000068: ncbiprotein

position:7828:-1
position: 7828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10575:-1
position: 10575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10429-10575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8269-8351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7828-8115:-1:exon

LOC128794392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128794392 isoform X2
translation: MQTFKICGRAPLPGQGVFPEKEVQADSCSQGQVCKVSLLPSACEGTESSGYPPGSLLSRIKISGPRVSTSYPGIYRRTSKSRGQKTRRSVNVFQLIFKFRIKNPQPGGFFFFPPAGFFFSSVPAGPRGDVHRQSSEADRPGTGVFVRQENFFGRSREPRSRGASCMRVDGRGSEERLRRERGWVCA
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(7828..8115,8269..8351,9882..9922,10004..10047,10311..10352,10429..10491))
location: region:7828-10491:-1
so has part: feature:10429-10491:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:8269-8351:-1:exon
so has part: feature:7828-8115:-1:exon

XP_053810170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10429-10491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8269-8351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7828-8115:-1:exon

LOC128794392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128794392 isoform X2
translation: MQTFKICGRAPLPGQGVFPEKEVQADSCSQGQVCKVSLLPSACEGTESSGYPPGSLLSRIKISGPRVSTSYPGIYRRTSKSRGQKTRRSVNVFQLIFKFRIKNPQPGGFFFFPPAGFFFSSVPAGPRGDVHRQSSEADRPGTGVFVRQENFFGRSREPRSRGASCMRVDGRGSEERLRRERGWVCA
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(7828..8115,8269..8351,9882..9922,10004..10047,10311..10352,10429..10491))
location: region:7828-10491:-1
so has part: feature:10429-10491:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:8269-8351:-1:exon
so has part: feature:7828-8115:-1:exon

XP_053810171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10429-10491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8269-8351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7828-8115:-1:exon

LOC128794392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128794392 isoform X4
translation: MVFLDSYRMLGPVKLSYSCLNFLLTFFQMQTFKICGRAPLPGQGVFPEKEVQADSCSQGQVCKVSLLPSACEGTESSGYPPGSLLSRIKISGPRVSTSYPGIYRRTSKSRGQKTRRSVNVAFQVRVAVSV
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(8233..8351,9882..9922,10004..10047,10311..10352,10429..10575))
location: region:8233-10575:-1
so has part: feature:10429-10575:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:8233-8351:-1:exon

XP_053810173.1
type: Protein
SIO_000068: ncbiprotein

position:8233:-1
position: 8233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10429-10575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8233-8351:-1:exon

LOC128794392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128794392 isoform X3
translation: MVFLDSYRMLGPVKLSYSCLNFLLTFFQMQTFKICGRAPLPGQGVFPEKEVQADSCSQGQVCKVSLLPSACEGTESSGYPPGSLLSRIKISGTVRRRIGEIWKRQHRSGCRDRVAVHVRLMMDFVWLSCKS
SIO_010081: LOC128794392
subclass of: SO_0000673
so part of: LOC128794392
location: complement(join(9679..9800,9882..9922,10004..10047,10311..10352,10429..10575))
location: region:9679-10575:-1
so has part: feature:10429-10575:-1:exon
so has part: feature:10311-10352:-1:exon
so has part: feature:10004-10047:-1:exon
so has part: feature:9882-9922:-1:exon
so has part: feature:9679-9800:-1:exon

XP_053810172.1
type: Protein
SIO_000068: ncbiprotein

position:9679:-1
position: 9679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10429-10575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10311-10352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10004-10047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9882-9922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9679-9800:-1:exon

LOC128793955
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128793955
note: uncharacterized LOC128793955; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17648..18304
location: region:17648-18304:1
so has part: feature:17648-18304:1:exon
subclass of: SO_0000011

128793955
type: Gene
SIO_000068: ncbigene

position:17648:1
position: 17648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18304:1
position: 18304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17648-18304:1:exon

LOC128793955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793955
product: uncharacterized LOC128793955
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008432943.1
SIO_010081: LOC128793955
subclass of: SO_0000673
so part of: LOC128793955
location: join(17648..17912,18130..18304)
location: region:17648-18304:1
so has part: feature:17648-17912:1:exon
so has part: feature:18130-18304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17648-17912:1:exon

position:17912:1
position: 17912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18130-18304:1:exon

position:18130:1
position: 18130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128793956
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128793956
note: uncharacterized LOC128793956; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24134..27192)
location: region:24134-27192:-1
so has part: feature:24134-27192:-1:exon
subclass of: SO_0000011

128793956
type: Gene
SIO_000068: ncbigene

position:24134:-1
position: 24134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27192:-1
position: 27192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24134-27192:-1:exon

LOC128793956
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793956
product: uncharacterized LOC128793956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008432944.1
SIO_010081: LOC128793956
subclass of: SO_0000673
so part of: LOC128793956
location: complement(join(24134..24257,26489..26648,26905..27192))
location: region:24134-27192:-1
so has part: feature:26905-27192:-1:exon
so has part: feature:26489-26648:-1:exon
so has part: feature:24134-24257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26905-27192:-1:exon

position:26905:-1
position: 26905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26489-26648:-1:exon

position:26489:-1
position: 26489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26648:-1
position: 26648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24134-24257:-1:exon

position:24257:-1
position: 24257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128793957
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128793957
note: uncharacterized LOC128793957; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37672..38457)
location: region:37672-38457:-1
so has part: feature:37672-38457:-1:exon
subclass of: SO_0000011

128793957
type: Gene
SIO_000068: ncbigene

position:37672:-1
position: 37672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38457:-1
position: 38457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37672-38457:-1:exon

LOC128793957
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793957
product: uncharacterized LOC128793957
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008432945.1
SIO_010081: LOC128793957
subclass of: SO_0000673
so part of: LOC128793957
location: complement(join(37672..38130,38238..38457))
location: region:37672-38457:-1
so has part: feature:38238-38457:-1:exon
so has part: feature:37672-38130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38238-38457:-1:exon

position:38238:-1
position: 38238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37672-38130:-1:exon

position:38130:-1
position: 38130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794284
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794284
note: serine/arginine repetitive matrix protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66078..72332)
location: region:66078-72332:-1
so has part: feature:66078-72332:-1:exon
subclass of: SO_0000010

128794284
type: Gene
SIO_000068: ncbigene

position:66078:-1
position: 66078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72332:-1
position: 72332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66078-72332:-1:exon

LOC128794284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794284
product: serine/arginine repetitive matrix protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954031.1
SIO_010081: LOC128794284
subclass of: SO_0000673
so part of: LOC128794284
location: complement(join(66078..66943,67519..67631,68262..68403,68937..69043,69346..69481,69583..69641,69726..69811,70704..71187,72182..72332))
location: region:66078-72332:-1
so has part: feature:72182-72332:-1:exon
so has part: feature:70704-71187:-1:exon
so has part: feature:69726-69811:-1:exon
so has part: feature:69583-69641:-1:exon
so has part: feature:69346-69481:-1:exon
so has part: feature:68937-69043:-1:exon
so has part: feature:68262-68403:-1:exon
so has part: feature:67519-67631:-1:exon
so has part: feature:66078-66943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72182-72332:-1:exon

position:72182:-1
position: 72182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70704-71187:-1:exon

position:70704:-1
position: 70704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71187:-1
position: 71187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69726-69811:-1:exon

position:69726:-1
position: 69726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69811:-1
position: 69811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69583-69641:-1:exon

position:69583:-1
position: 69583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69641:-1
position: 69641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69346-69481:-1:exon

position:69346:-1
position: 69346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69481:-1
position: 69481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:68937-69043:-1:exon

position:68937:-1
position: 68937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69043:-1
position: 69043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68262-68403:-1:exon

position:68262:-1
position: 68262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68403:-1
position: 68403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:67519-67631:-1:exon

position:67519:-1
position: 67519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67631:-1
position: 67631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:66078-66943:-1:exon

position:66943:-1
position: 66943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1-like
translation: MAAKKAGKRRTTVCLLHCLHGTLTPAPPHGIFFAFSRVVATDCELSGCAGGRPGGAAFGGRQRRGRSAHGPGAAGGGRAASEQGCTPLSRSPRASLSRRWKRPRAGKCRRGGAQAAERGPGFPRPSCRHLWKVKRAVPVPPRRCLVPPRSRRLPVLPRRLHSDTIRPRPGPPPLQGNAGERESIGAEQPLEVPEPSPPCPQGRRCPPPAADRSVLESGRRVPAGCRVLGGHRALTSARWAVRFLSHRFPGVLILTSPKPQASLPGPLPLPYLLDAVQNGIRQPSLRFTFSLTLCAARVAQQILKPEEHVYIRVKRFLLSHRYLDLRKVPGFLQLFYSFDFEYKTARVDPQISWGRAA
SIO_010081: LOC128794284
subclass of: SO_0000673
so part of: LOC128794284
location: complement(join(68353..68403,68937..69043,69346..69481,69583..69641,69726..69811,70704..71187,72182..72332))
location: region:68353-72332:-1
so has part: feature:72182-72332:-1:exon
so has part: feature:70704-71187:-1:exon
so has part: feature:69726-69811:-1:exon
so has part: feature:69583-69641:-1:exon
so has part: feature:69346-69481:-1:exon
so has part: feature:68937-69043:-1:exon
so has part: feature:68353-68403:-1:exon

XP_053810006.1
type: Protein
SIO_000068: ncbiprotein

position:68353:-1
position: 68353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72182-72332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70704-71187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69726-69811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69583-69641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69346-69481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68937-69043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:68353-68403:-1:exon

LOC128793953
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128793953
note: uncharacterized LOC128793953; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75821..82310)
location: region:75821-82310:-1
so has part: feature:75821-82310:-1:exon
subclass of: SO_0000011

128793953
type: Gene
SIO_000068: ncbigene

position:75821:-1
position: 75821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82310:-1
position: 82310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75821-82310:-1:exon

LOC128793953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793953
product: uncharacterized LOC128793953, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008432942.1
SIO_010081: LOC128793953
subclass of: SO_0000673
so part of: LOC128793953
location: complement(join(75821..76542,78852..79037,79560..79628,82037..82310))
location: region:75821-82310:-1
so has part: feature:82037-82310:-1:exon
so has part: feature:79560-79628:-1:exon
so has part: feature:78852-79037:-1:exon
so has part: feature:75821-76542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82037-82310:-1:exon

position:82037:-1
position: 82037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79560-79628:-1:exon

position:79560:-1
position: 79560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79628:-1
position: 79628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78852-79037:-1:exon

position:78852:-1
position: 78852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79037:-1
position: 79037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:75821-76542:-1:exon

position:76542:-1
position: 76542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128793953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793953
product: uncharacterized LOC128793953, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008432941.1
SIO_010081: LOC128793953
subclass of: SO_0000673
so part of: LOC128793953
location: complement(join(75821..76542,76625..77399,78852..79037,79560..79628,82037..82310))
location: region:75821-82310:-1
so has part: feature:82037-82310:-1:exon
so has part: feature:79560-79628:-1:exon
so has part: feature:78852-79037:-1:exon
so has part: feature:76625-77399:-1:exon
so has part: feature:75821-76542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82037-82310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79560-79628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78852-79037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76625-77399:-1:exon

position:76625:-1
position: 76625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77399:-1
position: 77399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75821-76542:-1:exon

FGD5
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: FGD5
note: FYVE, RhoGEF and PH domain containing 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 109452..191528
location: region:109452-191528:1
so has part: feature:109452-191528:1:exon
subclass of: SO_0000010

128794117
type: Gene
SIO_000068: ncbigene

position:109452:1
position: 109452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191528:1
position: 191528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109452-191528:1:exon

FGD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: FGD5
product: FYVE, RhoGEF and PH domain containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_053953764.1
SIO_010081: FGD5
subclass of: SO_0000673
so part of: FGD5
location: join(109452..109622,117090..120036,138128..138257,141074..141132,141242..141272,154188..154339,156134..156290,156719..156806,159678..159728,161252..161310,165440..165538,167009..167077,172379..172462,173990..174069,178336..178435,179948..180085,181162..181264,183284..183414,185093..185221,186907..187055,187775..191528)
location: region:109452-191528:1
so has part: feature:109452-109622:1:exon
so has part: feature:117090-120036:1:exon
so has part: feature:138128-138257:1:exon
so has part: feature:141074-141132:1:exon
so has part: feature:141242-141272:1:exon
so has part: feature:154188-154339:1:exon
so has part: feature:156134-156290:1:exon
so has part: feature:156719-156806:1:exon
so has part: feature:159678-159728:1:exon
so has part: feature:161252-161310:1:exon
so has part: feature:165440-165538:1:exon
so has part: feature:167009-167077:1:exon
so has part: feature:172379-172462:1:exon
so has part: feature:173990-174069:1:exon
so has part: feature:178336-178435:1:exon
so has part: feature:179948-180085:1:exon
so has part: feature:181162-181264:1:exon
so has part: feature:183284-183414:1:exon
so has part: feature:185093-185221:1:exon
so has part: feature:186907-187055:1:exon
so has part: feature:187775-191528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109452-109622:1:exon

position:109622:1
position: 109622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117090-120036:1:exon

position:117090:1
position: 117090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120036:1
position: 120036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138128-138257:1:exon

position:138128:1
position: 138128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138257:1
position: 138257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141074-141132:1:exon

position:141074:1
position: 141074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141132:1
position: 141132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141242-141272:1:exon

position:141242:1
position: 141242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141272:1
position: 141272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:154188-154339:1:exon

position:154188:1
position: 154188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154339:1
position: 154339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:156134-156290:1:exon

position:156134:1
position: 156134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156290:1
position: 156290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:156719-156806:1:exon

position:156719:1
position: 156719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156806:1
position: 156806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:159678-159728:1:exon

position:159678:1
position: 159678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159728:1
position: 159728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:161252-161310:1:exon

position:161252:1
position: 161252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161310:1
position: 161310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:165440-165538:1:exon

position:165440:1
position: 165440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165538:1
position: 165538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:167009-167077:1:exon

position:167009:1
position: 167009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167077:1
position: 167077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:172379-172462:1:exon

position:172379:1
position: 172379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172462:1
position: 172462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:173990-174069:1:exon

position:173990:1
position: 173990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174069:1
position: 174069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:178336-178435:1:exon

position:178336:1
position: 178336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178435:1
position: 178435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:179948-180085:1:exon

position:179948:1
position: 179948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180085:1
position: 180085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:181162-181264:1:exon

position:181162:1
position: 181162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181264:1
position: 181264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:183284-183414:1:exon

position:183284:1
position: 183284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183414:1
position: 183414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:185093-185221:1:exon

position:185093:1
position: 185093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185221:1
position: 185221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:186907-187055:1:exon

position:186907:1
position: 186907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187055:1
position: 187055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:187775-191528:1:exon

position:187775:1
position: 187775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: FGD5
product: FYVE, RhoGEF and PH domain containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_053953765.1
SIO_010081: FGD5
subclass of: SO_0000673
so part of: FGD5
location: join(109452..109622,117090..120036,138128..138257,141074..141132,141242..141272,154188..154339,156134..156290,156719..156806,159678..159728,161252..161310,165440..165511,167009..167077,172379..172462,173990..174069,178336..178435,179948..180085,181162..181264,183284..183414,185093..185221,186907..187055,187775..191528)
location: region:109452-191528:1
so has part: feature:109452-109622:1:exon
so has part: feature:117090-120036:1:exon
so has part: feature:138128-138257:1:exon
so has part: feature:141074-141132:1:exon
so has part: feature:141242-141272:1:exon
so has part: feature:154188-154339:1:exon
so has part: feature:156134-156290:1:exon
so has part: feature:156719-156806:1:exon
so has part: feature:159678-159728:1:exon
so has part: feature:161252-161310:1:exon
so has part: feature:165440-165511:1:exon
so has part: feature:167009-167077:1:exon
so has part: feature:172379-172462:1:exon
so has part: feature:173990-174069:1:exon
so has part: feature:178336-178435:1:exon
so has part: feature:179948-180085:1:exon
so has part: feature:181162-181264:1:exon
so has part: feature:183284-183414:1:exon
so has part: feature:185093-185221:1:exon
so has part: feature:186907-187055:1:exon
so has part: feature:187775-191528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109452-109622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117090-120036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138128-138257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141074-141132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141242-141272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154188-154339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156134-156290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156719-156806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159678-159728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161252-161310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:165440-165511:1:exon

position:165511:1
position: 165511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:167009-167077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172379-172462:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:173990-174069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178336-178435:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179948-180085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:181162-181264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183284-183414:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:185093-185221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186907-187055:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:187775-191528:1:exon

FGD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: FGD5
product: FYVE, RhoGEF and PH domain containing 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053953766.1
SIO_010081: FGD5
subclass of: SO_0000673
so part of: FGD5
location: join(109452..109622,117090..120036,138128..138257,141074..141132,141242..141272,154188..154339,156134..156290,156719..156806,159678..159728,161252..161310,165440..165538,167009..167077,172379..172462,173990..174069,178336..178435,179948..180085,181162..181264,181869..181934)
location: region:109452-181934:1
so has part: feature:109452-109622:1:exon
so has part: feature:117090-120036:1:exon
so has part: feature:138128-138257:1:exon
so has part: feature:141074-141132:1:exon
so has part: feature:141242-141272:1:exon
so has part: feature:154188-154339:1:exon
so has part: feature:156134-156290:1:exon
so has part: feature:156719-156806:1:exon
so has part: feature:159678-159728:1:exon
so has part: feature:161252-161310:1:exon
so has part: feature:165440-165538:1:exon
so has part: feature:167009-167077:1:exon
so has part: feature:172379-172462:1:exon
so has part: feature:173990-174069:1:exon
so has part: feature:178336-178435:1:exon
so has part: feature:179948-180085:1:exon
so has part: feature:181162-181264:1:exon
so has part: feature:181869-181934:1:exon

position:181934:1
position: 181934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109452-109622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117090-120036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138128-138257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141074-141132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141242-141272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154188-154339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156134-156290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156719-156806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159678-159728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161252-161310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:165440-165538:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167009-167077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172379-172462:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:173990-174069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178336-178435:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179948-180085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:181162-181264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:181869-181934:1:exon

position:181869:1
position: 181869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: FGD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
translation: MNNAEISKPPLAPKPKIIGHLSPASVSKFSPSLPRADILHHPNSVSRGPKPPIAPKPKFSADTEGKSSVSNNNNLNKYANGKLVCLDGELCEENQCNADCLGSDADSEYIVVPEAQLPRKDSNDLEHEHGQNLDSSVENDVSETPEKVEKEEDDIASDENTSNREVIKDEHHNSSDTAEPREPDSEEPSRDCGQSKALCEESLDTPDRDNNATKNVDEDEDVVGDCTETKTQQETSYNLELVKSSSDCETDSDNILNRDEKLMGDTCRDIIAMPLPADESIPACEKVGQEEEEELPEILEMADECLAQNDDHNVHAELDLNMEGDLENYDSASPDMLPEEASEETGPELELCGDELGAKNGLAEFIHEAAAEDEEVDPNEHNNTNTGNASDDCQITERKSEKTSEVASEARKDSGKEEEETVNAENMDDRCQIAPCENECHKEIPVEHSDENLQTEEASLHEDGMISDSLPCSPGMEPDLEVVTVEEHSENTVEASKSDELQVKENEVEANSLSKSVPNLPQEVPLEDDLEICKHGKIDVECGTKHIVHENLAVPEVVIVTDESEERETSSDSPDDPYVLPEENDIVHDVQTDSGADHSKRGELGMDGENNLLPTDRKSIVTRTRSLSGRMPGYVPETVPEETGPETDLSSSRNGSGTEELSNNSFSLEGKPVEANRALPTKSRRFILYPRSYSVEGREIPISVYRESDVCVLDGVRIKRTEDNLSLPCVNGSSGSFSQQNHLSSCGISTPSSVVDIPPPFELAYITKKPITKSSPSLLIENDSPAKYSKKKKSSFKRFLTLKFKKKTENKVHVDVNVSSSRSSSESSYHGPPRLMELEGRSLSSSPQLKSHVGKFRASESPSAVLFYKDGKRKGTPKSFSRSVSRVESFEDRSRPPFMPLPLTKPRSISFPNADTSDYENIPAMSSDYENIQIPPRRSTRAGTFTEFFEDPSRALSAANENDGYVDMSSFTGFENKQQTTDQETESAYTEPYKVCPVSVTPMEVVTSDEEQNSSEDDESSLGDPSLTKKKEGQSRAYLIAQELMSSEKVYVEMLQLLRMDFYEGILKVLGDDDENEQEEVKLKQGLSELPEIYELHQDILEELEERVLKWDEHQKVADVFLSRKSRLNHHTTYIMQFDRNLALLDETCLKYSQLATMIQEFEQRSGDSPYSVKHQLLKVVHRVFQYRVMLTDYLNNLCPDSTEYEATQAALLIVSEITDQANDSMLQAENLQKLVHIEHSVRGQSDLLQPGRVSAAGRPMLIFVKEGTLMKVSGKNRHPRHLFLMNDVLLYTYPQKDGKYRLRYTLVVSSMKVSRPVIEKAQNILKIEYDEHCLTLSASSCSERDDWYSCITKHIPDDCKAHKTSTFHSSVELREKFGIPLGERPPTLVPVSHVMMCMNCGCDFTLTLRRHHCHACGKIVCRNCSRNKYPMKYLKDQAAKVCDSCYVELKKRERPLSVSFPPTSSRCSSSAFSSVFHNIHYSSFKKQKKIPSALMEVAASEEGATISGYLSRCKGGKRHWKKRWFVIKGKVLYTYIANEDKVATESLPLLGFTIAPEKEEGSMDTVFHLYHKQTLFYSFRAEDNNSAHRWIEAMEEASIL
SIO_010081: FGD5
subclass of: SO_0000673
so part of: FGD5
location: join(109610..109622,117090..120036,138128..138257,141074..141132,141242..141272,154188..154339,156134..156290,156719..156806,159678..159728,161252..161310,165440..165538,167009..167077,172379..172462,173990..174069,178336..178435,179948..180085,181162..181264,183284..183414,185093..185221,186907..187055,187775..187811)
location: region:109610-187811:1
so has part: feature:109610-109622:1:exon
so has part: feature:117090-120036:1:exon
so has part: feature:138128-138257:1:exon
so has part: feature:141074-141132:1:exon
so has part: feature:141242-141272:1:exon
so has part: feature:154188-154339:1:exon
so has part: feature:156134-156290:1:exon
so has part: feature:156719-156806:1:exon
so has part: feature:159678-159728:1:exon
so has part: feature:161252-161310:1:exon
so has part: feature:165440-165538:1:exon
so has part: feature:167009-167077:1:exon
so has part: feature:172379-172462:1:exon
so has part: feature:173990-174069:1:exon
so has part: feature:178336-178435:1:exon
so has part: feature:179948-180085:1:exon
so has part: feature:181162-181264:1:exon
so has part: feature:183284-183414:1:exon
so has part: feature:185093-185221:1:exon
so has part: feature:186907-187055:1:exon
so has part: feature:187775-187811:1:exon

XP_053809739.1
type: Protein
SIO_000068: ncbiprotein

position:109610:1
position: 109610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187811:1
position: 187811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109610-109622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117090-120036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138128-138257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141074-141132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141242-141272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154188-154339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156134-156290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156719-156806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159678-159728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161252-161310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:165440-165538:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167009-167077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172379-172462:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:173990-174069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178336-178435:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179948-180085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:181162-181264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183284-183414:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:185093-185221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186907-187055:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:187775-187811:1:exon

FGD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: FGD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 5 isoform X2
translation: MNNAEISKPPLAPKPKIIGHLSPASVSKFSPSLPRADILHHPNSVSRGPKPPIAPKPKFSADTEGKSSVSNNNNLNKYANGKLVCLDGELCEENQCNADCLGSDADSEYIVVPEAQLPRKDSNDLEHEHGQNLDSSVENDVSETPEKVEKEEDDIASDENTSNREVIKDEHHNSSDTAEPREPDSEEPSRDCGQSKALCEESLDTPDRDNNATKNVDEDEDVVGDCTETKTQQETSYNLELVKSSSDCETDSDNILNRDEKLMGDTCRDIIAMPLPADESIPACEKVGQEEEEELPEILEMADECLAQNDDHNVHAELDLNMEGDLENYDSASPDMLPEEASEETGPELELCGDELGAKNGLAEFIHEAAAEDEEVDPNEHNNTNTGNASDDCQITERKSEKTSEVASEARKDSGKEEEETVNAENMDDRCQIAPCENECHKEIPVEHSDENLQTEEASLHEDGMISDSLPCSPGMEPDLEVVTVEEHSENTVEASKSDELQVKENEVEANSLSKSVPNLPQEVPLEDDLEICKHGKIDVECGTKHIVHENLAVPEVVIVTDESEERETSSDSPDDPYVLPEENDIVHDVQTDSGADHSKRGELGMDGENNLLPTDRKSIVTRTRSLSGRMPGYVPETVPEETGPETDLSSSRNGSGTEELSNNSFSLEGKPVEANRALPTKSRRFILYPRSYSVEGREIPISVYRESDVCVLDGVRIKRTEDNLSLPCVNGSSGSFSQQNHLSSCGISTPSSVVDIPPPFELAYITKKPITKSSPSLLIENDSPAKYSKKKKSSFKRFLTLKFKKKTENKVHVDVNVSSSRSSSESSYHGPPRLMELEGRSLSSSPQLKSHVGKFRASESPSAVLFYKDGKRKGTPKSFSRSVSRVESFEDRSRPPFMPLPLTKPRSISFPNADTSDYENIPAMSSDYENIQIPPRRSTRAGTFTEFFEDPSRALSAANENDGYVDMSSFTGFENKQQTTDQETESAYTEPYKVCPVSVTPMEVVTSDEEQNSSEDDESSLGDPSLTKKKEGQSRAYLIAQELMSSEKVYVEMLQLLRMDFYEGILKVLGDDDENEQEEVKLKQGLSELPEIYELHQDILEELEERVLKWDEHQKVADVFLSRKSRLNHHTTYIMQFDRNLALLDETCLKYSQLATMIQEFEQRSGDSPYSVKHQLLKVVHRVFQYRVMLTDYLNNLCPDSTEYEATQAALLIVSEITDQANDSMLQAENLQKLVHIEHSVRGQSDLLQPGRIFVKEGTLMKVSGKNRHPRHLFLMNDVLLYTYPQKDGKYRLRYTLVVSSMKVSRPVIEKAQNILKIEYDEHCLTLSASSCSERDDWYSCITKHIPDDCKAHKTSTFHSSVELREKFGIPLGERPPTLVPVSHVMMCMNCGCDFTLTLRRHHCHACGKIVCRNCSRNKYPMKYLKDQAAKVCDSCYVELKKRERPLSVSFPPTSSRCSSSAFSSVFHNIHYSSFKKQKKIPSALMEVAASEEGATISGYLSRCKGGKRHWKKRWFVIKGKVLYTYIANEDKVATESLPLLGFTIAPEKEEGSMDTVFHLYHKQTLFYSFRAEDNNSAHRWIEAMEEASIL
SIO_010081: FGD5
subclass of: SO_0000673
so part of: FGD5
location: join(109610..109622,117090..120036,138128..138257,141074..141132,141242..141272,154188..154339,156134..156290,156719..156806,159678..159728,161252..161310,165440..165511,167009..167077,172379..172462,173990..174069,178336..178435,179948..180085,181162..181264,183284..183414,185093..185221,186907..187055,187775..187811)
location: region:109610-187811:1
so has part: feature:109610-109622:1:exon
so has part: feature:117090-120036:1:exon
so has part: feature:138128-138257:1:exon
so has part: feature:141074-141132:1:exon
so has part: feature:141242-141272:1:exon
so has part: feature:154188-154339:1:exon
so has part: feature:156134-156290:1:exon
so has part: feature:156719-156806:1:exon
so has part: feature:159678-159728:1:exon
so has part: feature:161252-161310:1:exon
so has part: feature:165440-165511:1:exon
so has part: feature:167009-167077:1:exon
so has part: feature:172379-172462:1:exon
so has part: feature:173990-174069:1:exon
so has part: feature:178336-178435:1:exon
so has part: feature:179948-180085:1:exon
so has part: feature:181162-181264:1:exon
so has part: feature:183284-183414:1:exon
so has part: feature:185093-185221:1:exon
so has part: feature:186907-187055:1:exon
so has part: feature:187775-187811:1:exon

XP_053809740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109610-109622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117090-120036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138128-138257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141074-141132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141242-141272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154188-154339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156134-156290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156719-156806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159678-159728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161252-161310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:165440-165511:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167009-167077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172379-172462:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:173990-174069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178336-178435:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179948-180085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:181162-181264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183284-183414:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:185093-185221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186907-187055:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:187775-187811:1:exon

FGD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: FGD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 5 isoform X3
translation: MNNAEISKPPLAPKPKIIGHLSPASVSKFSPSLPRADILHHPNSVSRGPKPPIAPKPKFSADTEGKSSVSNNNNLNKYANGKLVCLDGELCEENQCNADCLGSDADSEYIVVPEAQLPRKDSNDLEHEHGQNLDSSVENDVSETPEKVEKEEDDIASDENTSNREVIKDEHHNSSDTAEPREPDSEEPSRDCGQSKALCEESLDTPDRDNNATKNVDEDEDVVGDCTETKTQQETSYNLELVKSSSDCETDSDNILNRDEKLMGDTCRDIIAMPLPADESIPACEKVGQEEEEELPEILEMADECLAQNDDHNVHAELDLNMEGDLENYDSASPDMLPEEASEETGPELELCGDELGAKNGLAEFIHEAAAEDEEVDPNEHNNTNTGNASDDCQITERKSEKTSEVASEARKDSGKEEEETVNAENMDDRCQIAPCENECHKEIPVEHSDENLQTEEASLHEDGMISDSLPCSPGMEPDLEVVTVEEHSENTVEASKSDELQVKENEVEANSLSKSVPNLPQEVPLEDDLEICKHGKIDVECGTKHIVHENLAVPEVVIVTDESEERETSSDSPDDPYVLPEENDIVHDVQTDSGADHSKRGELGMDGENNLLPTDRKSIVTRTRSLSGRMPGYVPETVPEETGPETDLSSSRNGSGTEELSNNSFSLEGKPVEANRALPTKSRRFILYPRSYSVEGREIPISVYRESDVCVLDGVRIKRTEDNLSLPCVNGSSGSFSQQNHLSSCGISTPSSVVDIPPPFELAYITKKPITKSSPSLLIENDSPAKYSKKKKSSFKRFLTLKFKKKTENKVHVDVNVSSSRSSSESSYHGPPRLMELEGRSLSSSPQLKSHVGKFRASESPSAVLFYKDGKRKGTPKSFSRSVSRVESFEDRSRPPFMPLPLTKPRSISFPNADTSDYENIPAMSSDYENIQIPPRRSTRAGTFTEFFEDPSRALSAANENDGYVDMSSFTGFENKQQTTDQETESAYTEPYKVCPVSVTPMEVVTSDEEQNSSEDDESSLGDPSLTKKKEGQSRAYLIAQELMSSEKVYVEMLQLLRMDFYEGILKVLGDDDENEQEEVKLKQGLSELPEIYELHQDILEELEERVLKWDEHQKVADVFLSRKSRLNHHTTYIMQFDRNLALLDETCLKYSQLATMIQEFEQRSGDSPYSVKHQLLKVVHRVFQYRVMLTDYLNNLCPDSTEYEATQAALLIVSEITDQANDSMLQAENLQKLVHIEHSVRGQSDLLQPGRVSAAGRPMLIFVKEGTLMKVSGKNRHPRHLFLMNDVLLYTYPQKDGKYRLRYTLVVSSMKVSRPVIEKAQNILKIEYDEHCLTLSASSCSERDDWYSCITKHIPDDCKAHKTSTFHSSVELREKFGIPLGERPPTLVPVSHVMMCMNCGCDFTLTLRRHHCHACGKIVCRNCSRNKYPMKYLKDQAAKVCDSCYVELKKRAS
SIO_010081: FGD5
subclass of: SO_0000673
so part of: FGD5
location: join(109610..109622,117090..120036,138128..138257,141074..141132,141242..141272,154188..154339,156134..156290,156719..156806,159678..159728,161252..161310,165440..165538,167009..167077,172379..172462,173990..174069,178336..178435,179948..180085,181162..181264,181869..181876)
location: region:109610-181876:1
so has part: feature:109610-109622:1:exon
so has part: feature:117090-120036:1:exon
so has part: feature:138128-138257:1:exon
so has part: feature:141074-141132:1:exon
so has part: feature:141242-141272:1:exon
so has part: feature:154188-154339:1:exon
so has part: feature:156134-156290:1:exon
so has part: feature:156719-156806:1:exon
so has part: feature:159678-159728:1:exon
so has part: feature:161252-161310:1:exon
so has part: feature:165440-165538:1:exon
so has part: feature:167009-167077:1:exon
so has part: feature:172379-172462:1:exon
so has part: feature:173990-174069:1:exon
so has part: feature:178336-178435:1:exon
so has part: feature:179948-180085:1:exon
so has part: feature:181162-181264:1:exon
so has part: feature:181869-181876:1:exon

XP_053809741.1
type: Protein
SIO_000068: ncbiprotein

position:181876:1
position: 181876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109610-109622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117090-120036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138128-138257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141074-141132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141242-141272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154188-154339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156134-156290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156719-156806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159678-159728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161252-161310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:165440-165538:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167009-167077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172379-172462:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:173990-174069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178336-178435:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179948-180085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:181162-181264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:181869-181876:1:exon

NR2C2
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: NR2C2
note: nuclear receptor subfamily 2 group C member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 194706..234248
location: region:194706-234248:1
so has part: feature:194706-234248:1:exon
subclass of: SO_0000010

128793940
type: Gene
SIO_000068: ncbigene

position:194706:1
position: 194706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234248:1
position: 234248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194706-234248:1:exon

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953434.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(194706..194775,198115..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..234248)
location: region:194706-234248:1
so has part: feature:194706-194775:1:exon
so has part: feature:198115-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-234248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194706-194775:1:exon

position:194775:1
position: 194775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198115-198198:1:exon

position:198115:1
position: 198115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198198:1
position: 198198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205984-206094:1:exon

position:205984:1
position: 205984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206094:1
position: 206094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206934-207134:1:exon

position:206934:1
position: 206934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207134:1
position: 207134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208386-208488:1:exon

position:208386:1
position: 208386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208488:1
position: 208488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:209507-209686:1:exon

position:209507:1
position: 209507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209686:1
position: 209686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211461-211608:1:exon

position:211461:1
position: 211461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211608:1
position: 211608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:213255-213348:1:exon

position:213255:1
position: 213255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213348:1
position: 213348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:213761-213894:1:exon

position:213761:1
position: 213761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213894:1
position: 213894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:217740-217917:1:exon

position:217740:1
position: 217740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217917:1
position: 217917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:218189-218310:1:exon

position:218189:1
position: 218189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218310:1
position: 218310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:218834-218973:1:exon

position:218834:1
position: 218834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218973:1
position: 218973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:221895-222032:1:exon

position:221895:1
position: 221895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222032:1
position: 222032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:223568-223673:1:exon

position:223568:1
position: 223568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223673:1
position: 223673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:225920-234248:1:exon

position:225920:1
position: 225920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953440.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(194729..194775,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..234248)
location: region:194729-234248:1
so has part: feature:194729-194775:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-234248:1:exon

position:194729:1
position: 194729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194729-194775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225920-234248:1:exon

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953432.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(194806..194980,198115..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..234248)
location: region:194806-234248:1
so has part: feature:194806-194980:1:exon
so has part: feature:198115-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-234248:1:exon

position:194806:1
position: 194806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194806-194980:1:exon

position:194980:1
position: 194980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198115-198198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:225920-234248:1:exon

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953435.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(194806..194980,198115..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..225996,227765..234248)
location: region:194806-234248:1
so has part: feature:194806-194980:1:exon
so has part: feature:198115-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-225996:1:exon
so has part: feature:227765-234248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194806-194980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198115-198198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:225920-225996:1:exon

position:225996:1
position: 225996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:227765-234248:1:exon

position:227765:1
position: 227765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953436.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(194806..194980,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..234248)
location: region:194806-234248:1
so has part: feature:194806-194980:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-234248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194806-194980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225920-234248:1:exon

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953439.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(195268..195313,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..234248)
location: region:195268-234248:1
so has part: feature:195268-195313:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-234248:1:exon

position:195268:1
position: 195268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195268-195313:1:exon

position:195313:1
position: 195313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225920-234248:1:exon

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953433.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(195965..196347,198115..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..234248)
location: region:195965-234248:1
so has part: feature:195965-196347:1:exon
so has part: feature:198115-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-234248:1:exon

position:195965:1
position: 195965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195965-196347:1:exon

position:196347:1
position: 196347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198115-198198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:225920-234248:1:exon

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953438.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(198113..198198,199468..199567,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..234248)
location: region:198113-234248:1
so has part: feature:198113-198198:1:exon
so has part: feature:199468-199567:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-234248:1:exon

position:198113:1
position: 198113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198113-198198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199468-199567:1:exon

position:199468:1
position: 199468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199567:1
position: 199567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:225920-234248:1:exon

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X2
translation: MASNMEVLAQQVVETQQVAEVPTVQTSLPESPVMTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGSGCIQVFYSYYF
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(198139..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..225996,227765..227805)
location: region:198139-227805:1
so has part: feature:198139-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-225996:1:exon
so has part: feature:227765-227805:1:exon

XP_053809410.1
type: Protein
SIO_000068: ncbiprotein

position:198139:1
position: 198139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227805:1
position: 227805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198139-198198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225920-225996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227765-227805:1:exon

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X1
translation: MASNMEVLAQQVVETQQVAEVPTVQTSLPESPVMTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(198139..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..226094)
location: region:198139-226094:1
so has part: feature:198139-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-226094:1:exon

XP_053809407.1
type: Protein
SIO_000068: ncbiprotein

position:226094:1
position: 226094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198139-198198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225920-226094:1:exon

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X1
translation: MASNMEVLAQQVVETQQVAEVPTVQTSLPESPVMTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(198139..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..226094)
location: region:198139-226094:1
so has part: feature:198139-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-226094:1:exon

XP_053809408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198139-198198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225920-226094:1:exon

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X1
translation: MASNMEVLAQQVVETQQVAEVPTVQTSLPESPVMTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(198139..198198,205984..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..226094)
location: region:198139-226094:1
so has part: feature:198139-198198:1:exon
so has part: feature:205984-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-226094:1:exon

XP_053809409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198139-198198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205984-206094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225920-226094:1:exon

LOC128793941
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128793941
note: uncharacterized LOC128793941; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(204657..207684)
location: region:204657-207684:-1
so has part: feature:204657-207684:-1:exon
subclass of: SO_0000011

128793941
type: Gene
SIO_000068: ncbigene

position:204657:-1
position: 204657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207684:-1
position: 207684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204657-207684:-1:exon

LOC128793941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793941
product: uncharacterized LOC128793941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008432936.1
SIO_010081: LOC128793941
subclass of: SO_0000673
so part of: LOC128793941
location: complement(join(204657..204857,205735..205793,207374..207684))
location: region:204657-207684:-1
so has part: feature:207374-207684:-1:exon
so has part: feature:205735-205793:-1:exon
so has part: feature:204657-204857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207374-207684:-1:exon

position:207374:-1
position: 207374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205735-205793:-1:exon

position:205735:-1
position: 205735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205793:-1
position: 205793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204657-204857:-1:exon

position:204857:-1
position: 204857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X3
translation: MTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(206023..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..226094)
location: region:206023-226094:1
so has part: feature:206023-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-226094:1:exon

XP_053809411.1
type: Protein
SIO_000068: ncbiprotein

position:206023:1
position: 206023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206023-206094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225920-226094:1:exon

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X3
translation: MTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(206023..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..226094)
location: region:206023-226094:1
so has part: feature:206023-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-226094:1:exon

XP_053809413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206023-206094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225920-226094:1:exon

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X3
translation: MTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(206023..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..226094)
location: region:206023-226094:1
so has part: feature:206023-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-226094:1:exon

XP_053809414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206023-206094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225920-226094:1:exon

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: NR2C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 2 isoform X3
translation: MTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGSGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRSPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALNTTDGTTAHNLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(206023..206094,206934..207134,208386..208488,209507..209686,211461..211608,213255..213348,213761..213894,217740..217917,218189..218310,218834..218973,221895..222032,223568..223673,225920..226094)
location: region:206023-226094:1
so has part: feature:206023-206094:1:exon
so has part: feature:206934-207134:1:exon
so has part: feature:208386-208488:1:exon
so has part: feature:209507-209686:1:exon
so has part: feature:211461-211608:1:exon
so has part: feature:213255-213348:1:exon
so has part: feature:213761-213894:1:exon
so has part: feature:217740-217917:1:exon
so has part: feature:218189-218310:1:exon
so has part: feature:218834-218973:1:exon
so has part: feature:221895-222032:1:exon
so has part: feature:223568-223673:1:exon
so has part: feature:225920-226094:1:exon

XP_053809415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206023-206094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206934-207134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208386-208488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209507-209686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211461-211608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213255-213348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213761-213894:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217740-217917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218189-218310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218834-218973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:221895-222032:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:223568-223673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225920-226094:1:exon

LOC128793942
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128793942
note: uncharacterized LOC128793942; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216763..219122)
location: region:216763-219122:-1
so has part: feature:216763-219122:-1:exon
subclass of: SO_0000011

128793942
type: Gene
SIO_000068: ncbigene

position:216763:-1
position: 216763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219122:-1
position: 219122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216763-219122:-1:exon

LOC128793942
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793942
product: uncharacterized LOC128793942, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008432938.1
SIO_010081: LOC128793942
subclass of: SO_0000673
so part of: LOC128793942
location: complement(join(216763..216805,218885..218951,219051..219122))
location: region:216763-219122:-1
so has part: feature:219051-219122:-1:exon
so has part: feature:218885-218951:-1:exon
so has part: feature:216763-216805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219051-219122:-1:exon

position:219051:-1
position: 219051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218885-218951:-1:exon

position:218885:-1
position: 218885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218951:-1
position: 218951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216763-216805:-1:exon

position:216805:-1
position: 216805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128793942
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128793942
product: uncharacterized LOC128793942, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008432937.1
SIO_010081: LOC128793942
subclass of: SO_0000673
so part of: LOC128793942
location: complement(join(217743..217816,218885..218951,219051..219122))
location: region:217743-219122:-1
so has part: feature:219051-219122:-1:exon
so has part: feature:218885-218951:-1:exon
so has part: feature:217743-217816:-1:exon

position:217743:-1
position: 217743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219051-219122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218885-218951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217743-217816:-1:exon

position:217816:-1
position: 217816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: MRPS25
note: mitochondrial ribosomal protein S25; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 234759..236772
location: region:234759-236772:1
so has part: feature:234759-236772:1:exon
subclass of: SO_0000010

128793997
type: Gene
SIO_000068: ncbigene

position:234759:1
position: 234759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236772:1
position: 236772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234759-236772:1:exon

MRPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: MRPS25
product: mitochondrial ribosomal protein S25
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953543.1
SIO_010081: MRPS25
subclass of: SO_0000673
so part of: MRPS25
location: join(234759..235075,235195..235301,235628..235715,235941..236772)
location: region:234759-236772:1
so has part: feature:234759-235075:1:exon
so has part: feature:235195-235301:1:exon
so has part: feature:235628-235715:1:exon
so has part: feature:235941-236772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234759-235075:1:exon

position:235075:1
position: 235075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235195-235301:1:exon

position:235195:1
position: 235195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235301:1
position: 235301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235628-235715:1:exon

position:235628:1
position: 235628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235715:1
position: 235715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235941-236772:1:exon

position:235941:1
position: 235941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: MRPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S25, mitochondrial
translation: MPMKGRFPVRRTLQYLSQGDVVFKSSVKVMTVNYNTAGELSEGARKFVFFNIPQIQYRNPWVQIMLFRNMTPSPFLRFYLDSGEQVLVDVEDKTNKEITEHIKKILGKSKEMLEKEERERKKLSHPATFGPKKYHLRECMCEIEGQVPCPAFVPLPKEMRGKYKAAMKNEA
SIO_010081: MRPS25
subclass of: SO_0000673
so part of: MRPS25
location: join(234942..235075,235195..235301,235628..235715,235941..236127)
location: region:234942-236127:1
so has part: feature:234942-235075:1:exon
so has part: feature:235195-235301:1:exon
so has part: feature:235628-235715:1:exon
so has part: feature:235941-236127:1:exon

XP_053809518.1
type: Protein
SIO_000068: ncbiprotein

position:234942:1
position: 234942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236127:1
position: 236127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234942-235075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235195-235301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235628-235715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235941-236127:1:exon

RBSN
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: RBSN
note: rabenosyn, RAB effector; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236747..250565)
location: region:236747-250565:-1
so has part: feature:236747-250565:-1:exon
subclass of: SO_0000010

128793996
type: Gene
SIO_000068: ncbigene

position:236747:-1
position: 236747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250565:-1
position: 250565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236747-250565:-1:exon

RBSN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: RBSN
product: rabenosyn, RAB effector
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953542.1
SIO_010081: RBSN
subclass of: SO_0000673
so part of: RBSN
location: complement(join(236747..240215,241101..241175,241608..241710,242139..242225,243907..243977,244795..245036,245924..246085,246180..246225,246831..246931,248745..248885,250156..250565))
location: region:236747-250565:-1
so has part: feature:250156-250565:-1:exon
so has part: feature:248745-248885:-1:exon
so has part: feature:246831-246931:-1:exon
so has part: feature:246180-246225:-1:exon
so has part: feature:245924-246085:-1:exon
so has part: feature:244795-245036:-1:exon
so has part: feature:243907-243977:-1:exon
so has part: feature:242139-242225:-1:exon
so has part: feature:241608-241710:-1:exon
so has part: feature:241101-241175:-1:exon
so has part: feature:236747-240215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250156-250565:-1:exon

position:250156:-1
position: 250156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248745-248885:-1:exon

position:248745:-1
position: 248745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248885:-1
position: 248885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246831-246931:-1:exon

position:246831:-1
position: 246831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246931:-1
position: 246931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246180-246225:-1:exon

position:246180:-1
position: 246180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246225:-1
position: 246225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245924-246085:-1:exon

position:245924:-1
position: 245924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246085:-1
position: 246085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244795-245036:-1:exon

position:244795:-1
position: 244795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245036:-1
position: 245036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:243907-243977:-1:exon

position:243907:-1
position: 243907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243977:-1
position: 243977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242139-242225:-1:exon

position:242139:-1
position: 242139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242225:-1
position: 242225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:241608-241710:-1:exon

position:241608:-1
position: 241608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241710:-1
position: 241710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:241101-241175:-1:exon

position:241101:-1
position: 241101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241175:-1
position: 241175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:236747-240215:-1:exon

position:240215:-1
position: 240215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBSN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: RBSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rabenosyn-5
translation: MASGCPAAFGDPTEVREGFLCPLCLKDLQAFRQLQAHYEEQHPGEDRDVRAQLRNLVQKAKKAKKKLLKQDDDRTDSGAQERYESFSYGGVDPYMWEPQEVGAMRSHLSEFKKHRAARIDHYVVEVNKLIIRLEKLTSFDRANTESAKIRAIEKSVVPWVSDQDVPFCPDCGSKFSIRNRRHHCRLCGSIMCKKCMEFVSLPLASKLTSASKEALGSHTSPNSSPSSVHGSRRGSISSISSVSSVLDEKDDERIRCCQHCKDTLLKREQQIDEKEYTPEIVKLYEKLRLCMEKVDQKAPEYIRMAESLNAGESAYNLDHANDLRVEIQKMYEFIDALSKKILSLGLHEDPQPHPKILQLQRMIRYSATLFVQEKLLGLMSLPTKDQYEELKKRRLHMVALETQGKQEEKQEFISISASVVNGDETHIKKGTVKKSEGWLPTSSISRESERADPLLQQIDNITSFIKQAKAANRIDEVHMLQENLMQLQDEYDQQQTLKAIELSKKQAEEEEIQREELQVLREKEWEREHHQFMSQHSRTRSLDFREVKQHLDVTWIKGDMSFETPAVEQLPAKEHSTFTLKPQNVPQCDKDRDQPACLNPFEDEADTPQVEDPDNPFAKGTSPVASFSNTAQQSDKKEYNPFESEEEEEQSNGAPGSTSNPFEEDENPFEKPGGSWNSGNPFEEGSSNNPFEVEDGSEISGEEAIEEELLLQQIDNIKAYIFDAKHSGRLDEVEVLTENLKELKHTLAKQKEKSNS
SIO_010081: RBSN
subclass of: SO_0000673
so part of: RBSN
location: complement(join(239136..240215,241101..241175,241608..241710,242139..242225,243907..243977,244795..245036,245924..246085,246180..246225,246831..246931,248745..248885,250156..250318))
location: region:239136-250318:-1
so has part: feature:250156-250318:-1:exon
so has part: feature:248745-248885:-1:exon
so has part: feature:246831-246931:-1:exon
so has part: feature:246180-246225:-1:exon
so has part: feature:245924-246085:-1:exon
so has part: feature:244795-245036:-1:exon
so has part: feature:243907-243977:-1:exon
so has part: feature:242139-242225:-1:exon
so has part: feature:241608-241710:-1:exon
so has part: feature:241101-241175:-1:exon
so has part: feature:239136-240215:-1:exon

XP_053809517.1
type: Protein
SIO_000068: ncbiprotein

position:239136:-1
position: 239136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250318:-1
position: 250318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250156-250318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248745-248885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246831-246931:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246180-246225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245924-246085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244795-245036:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243907-243977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242139-242225:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241608-241710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:241101-241175:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239136-240215:-1:exon

TRH
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: TRH
note: thyrotropin releasing hormone; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(257591..261514)
location: region:257591-261514:-1
so has part: feature:257591-261514:-1:exon
subclass of: SO_0000010

128794114
type: Gene
SIO_000068: ncbigene

position:257591:-1
position: 257591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261514:-1
position: 261514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257591-261514:-1:exon

TRH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TRH
product: thyrotropin releasing hormone
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_053953760.1
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(257591..259244,260108..260325,261318..261514))
location: region:257591-261514:-1
so has part: feature:261318-261514:-1:exon
so has part: feature:260108-260325:-1:exon
so has part: feature:257591-259244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261318-261514:-1:exon

position:261318:-1
position: 261318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260108-260325:-1:exon

position:260108:-1
position: 260108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260325:-1
position: 260325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:257591-259244:-1:exon

position:259244:-1
position: 259244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TRH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin releasing hormone
translation: MPSIQLPLLLLCLTSCGVCFNGGHLLPEESENMGKRPLDDILQRSESLILQSVLKKAEKEEEINKESNAALLQRLSKRQHPGRKYLSNLEKRQHPGKRDVKEQTSYGDTQKRQHPGKREMEDDLDVYLELKRQQPPGRKSLLDQFVYSPRAQLTYMNELSKREYPGRRYPMFKHQHPSKRGWNYEVDVYGEKRQHPGKRHWNFDSSDDTGPCNFQRSFTCHKGSLLLDLVEDLSRDRVEEKRQHPGKRAAWESEAEE
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(258667..259244,260108..260303))
location: region:258667-260303:-1
so has part: feature:260108-260303:-1:exon
so has part: feature:258667-259244:-1:exon

XP_053809735.1
type: Protein
SIO_000068: ncbiprotein

position:258667:-1
position: 258667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260303:-1
position: 260303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260108-260303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258667-259244:-1:exon

TMCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: TMCC1
note: transmembrane and coiled-coil domain family 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281070..354304
location: region:281070-354304:1
so has part: feature:281070-354304:1:exon
subclass of: SO_0000010

128794386
type: Gene
SIO_000068: ncbigene

position:281070:1
position: 281070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354304:1
position: 354304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281070-354304:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954186.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(281070..281135,295491..295547,298680..298924,340479..341413,347693..347828,350140..354304)
location: region:281070-354304:1
so has part: feature:281070-281135:1:exon
so has part: feature:295491-295547:1:exon
so has part: feature:298680-298924:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-354304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281070-281135:1:exon

position:281135:1
position: 281135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295491-295547:1:exon

position:295491:1
position: 295491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295547:1
position: 295547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298680-298924:1:exon

position:298680:1
position: 298680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298924:1
position: 298924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340479-341413:1:exon

position:340479:1
position: 340479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341413:1
position: 341413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:347693-347828:1:exon

position:347693:1
position: 347693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347828:1
position: 347828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:350140-354304:1:exon

position:350140:1
position: 350140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954190.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(281076..281135,295491..295547,340479..341413,347693..347828,350140..354304)
location: region:281076-354304:1
so has part: feature:281076-281135:1:exon
so has part: feature:295491-295547:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-354304:1:exon

position:281076:1
position: 281076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281076-281135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295491-295547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350140-354304:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954187.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(281119..281135,284578..284824,295491..295547,298680..298924,340479..341413,347693..347828,350140..354304)
location: region:281119-354304:1
so has part: feature:281119-281135:1:exon
so has part: feature:284578-284824:1:exon
so has part: feature:295491-295547:1:exon
so has part: feature:298680-298924:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-354304:1:exon

position:281119:1
position: 281119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281119-281135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284578-284824:1:exon

position:284578:1
position: 284578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284824:1
position: 284824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295491-295547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:298680-298924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350140-354304:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954191.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(281160..281239,295491..295547,340479..341413,347693..347828,350140..354304)
location: region:281160-354304:1
so has part: feature:281160-281239:1:exon
so has part: feature:295491-295547:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-354304:1:exon

position:281160:1
position: 281160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281160-281239:1:exon

position:281239:1
position: 281239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295491-295547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350140-354304:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954189.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(281829..281901,284578..284824,295491..295547,340479..341413,347693..347828,350140..354304)
location: region:281829-354304:1
so has part: feature:281829-281901:1:exon
so has part: feature:284578-284824:1:exon
so has part: feature:295491-295547:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-354304:1:exon

position:281829:1
position: 281829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281829-281901:1:exon

position:281901:1
position: 281901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284578-284824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295491-295547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350140-354304:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X4
translation: MMEIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(295539..295547,340479..341413,347693..347828,350140..350454)
location: region:295539-350454:1
so has part: feature:295539-295547:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-350454:1:exon

XP_053810164.1
type: Protein
SIO_000068: ncbiprotein

position:295539:1
position: 295539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350454:1
position: 350454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295539-295547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-350454:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X4
translation: MMEIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(295539..295547,340479..341413,347693..347828,350140..350454)
location: region:295539-350454:1
so has part: feature:295539-295547:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-350454:1:exon

XP_053810165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295539-295547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-350454:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X4
translation: MMEIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(295539..295547,340479..341413,347693..347828,350140..350454)
location: region:295539-350454:1
so has part: feature:295539-295547:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-350454:1:exon

XP_053810166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295539-295547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-350454:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954185.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(298217..298924,340479..341413,347693..347828,350140..354304)
location: region:298217-354304:1
so has part: feature:298217-298924:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-354304:1:exon

position:298217:1
position: 298217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298217-298924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-354304:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X1
translation: MEPSGTEQLSDDPDPGGKSQDQETKRQHESEQKLSKITHNALENINVIGQGLKHLFQHQRRRSSVSPHDVQQAQAELEPDLDLESQSVCAEIDGVSTHPTALNRVLQQIRVPPKMKRGTSLHSRWGKGDAPKGSPQINRRSAQDIQSGRPRSSSTTDAPTNLSVMEIASSIYVGGEEATAAAIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(298379..298924,340479..341413,347693..347828,350140..350454)
location: region:298379-350454:1
so has part: feature:298379-298924:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-350454:1:exon

XP_053810160.1
type: Protein
SIO_000068: ncbiprotein

position:298379:1
position: 298379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298379-298924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-350454:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X2
translation: MKRGTSLHSRWGKGDAPKGSPQINRRSAQDIQSGRPRSSSTTDAPTNLSVMEIASSIYVGGEEATAAAIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(298721..298924,340479..341413,347693..347828,350140..350454)
location: region:298721-350454:1
so has part: feature:298721-298924:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-350454:1:exon

XP_053810161.1
type: Protein
SIO_000068: ncbiprotein

position:298721:1
position: 298721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298721-298924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-350454:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X2
translation: MKRGTSLHSRWGKGDAPKGSPQINRRSAQDIQSGRPRSSSTTDAPTNLSVMEIASSIYVGGEEATAAAIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(298721..298924,340479..341413,347693..347828,350140..350454)
location: region:298721-350454:1
so has part: feature:298721-298924:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-350454:1:exon

XP_053810162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298721-298924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-350454:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954188.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(339597..339648,340479..341413,347693..347828,350140..354304)
location: region:339597-354304:1
so has part: feature:339597-339648:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-354304:1:exon

position:339597:1
position: 339597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339597-339648:1:exon

position:339648:1
position: 339648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-354304:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X3
translation: MHGERALLPRRDKIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(339610..339648,340479..341413,347693..347828,350140..350454)
location: region:339610-350454:1
so has part: feature:339610-339648:1:exon
so has part: feature:340479-341413:1:exon
so has part: feature:347693-347828:1:exon
so has part: feature:350140-350454:1:exon

XP_053810163.1
type: Protein
SIO_000068: ncbiprotein

position:339610:1
position: 339610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339610-339648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340479-341413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347693-347828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350140-350454:1:exon

PLXND1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: PLXND1
note: plexin D1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 374154..445164
location: region:374154-445164:1
so has part: feature:374154-445164:1:exon
subclass of: SO_0000010

128794199
type: Gene
SIO_000068: ncbigene

position:374154:1
position: 374154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445164:1
position: 445164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374154-445164:1:exon

PLXND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: PLXND1
product: plexin D1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953895.1
SIO_010081: PLXND1
subclass of: SO_0000673
so part of: PLXND1
location: join(374154..375497,391325..391501,394608..394739,396457..396557,397228..397357,397889..398063,399530..399638,400492..400594,403409..403516,405324..405413,406262..406355,408769..408932,409702..409853,410002..410101,413104..413243,413587..413754,415663..415753,415904..416179,417086..417235,420811..420925,421907..422014,422664..422776,423948..424055,424596..424726,425089..425287,430973..431119,431837..431993,432196..432299,433276..433339,434204..434238,435331..435435,436193..436356,437751..437898,440932..441072,441879..441953,442583..445164)
location: region:374154-445164:1
so has part: feature:374154-375497:1:exon
so has part: feature:391325-391501:1:exon
so has part: feature:394608-394739:1:exon
so has part: feature:396457-396557:1:exon
so has part: feature:397228-397357:1:exon
so has part: feature:397889-398063:1:exon
so has part: feature:399530-399638:1:exon
so has part: feature:400492-400594:1:exon
so has part: feature:403409-403516:1:exon
so has part: feature:405324-405413:1:exon
so has part: feature:406262-406355:1:exon
so has part: feature:408769-408932:1:exon
so has part: feature:409702-409853:1:exon
so has part: feature:410002-410101:1:exon
so has part: feature:413104-413243:1:exon
so has part: feature:413587-413754:1:exon
so has part: feature:415663-415753:1:exon
so has part: feature:415904-416179:1:exon
so has part: feature:417086-417235:1:exon
so has part: feature:420811-420925:1:exon
so has part: feature:421907-422014:1:exon
so has part: feature:422664-422776:1:exon
so has part: feature:423948-424055:1:exon
so has part: feature:424596-424726:1:exon
so has part: feature:425089-425287:1:exon
so has part: feature:430973-431119:1:exon
so has part: feature:431837-431993:1:exon
so has part: feature:432196-432299:1:exon
so has part: feature:433276-433339:1:exon
so has part: feature:434204-434238:1:exon
so has part: feature:435331-435435:1:exon
so has part: feature:436193-436356:1:exon
so has part: feature:437751-437898:1:exon
so has part: feature:440932-441072:1:exon
so has part: feature:441879-441953:1:exon
so has part: feature:442583-445164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374154-375497:1:exon

position:375497:1
position: 375497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391325-391501:1:exon

position:391325:1
position: 391325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391501:1
position: 391501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394608-394739:1:exon

position:394608:1
position: 394608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394739:1
position: 394739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396457-396557:1:exon

position:396457:1
position: 396457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396557:1
position: 396557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397228-397357:1:exon

position:397228:1
position: 397228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397357:1
position: 397357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:397889-398063:1:exon

position:397889:1
position: 397889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398063:1
position: 398063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:399530-399638:1:exon

position:399530:1
position: 399530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399638:1
position: 399638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:400492-400594:1:exon

position:400492:1
position: 400492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400594:1
position: 400594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:403409-403516:1:exon

position:403409:1
position: 403409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403516:1
position: 403516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405324-405413:1:exon

position:405324:1
position: 405324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405413:1
position: 405413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:406262-406355:1:exon

position:406262:1
position: 406262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406355:1
position: 406355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:408769-408932:1:exon

position:408769:1
position: 408769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408932:1
position: 408932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:409702-409853:1:exon

position:409702:1
position: 409702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409853:1
position: 409853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:410002-410101:1:exon

position:410002:1
position: 410002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410101:1
position: 410101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:413104-413243:1:exon

position:413104:1
position: 413104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413243:1
position: 413243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:413587-413754:1:exon

position:413587:1
position: 413587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413754:1
position: 413754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:415663-415753:1:exon

position:415663:1
position: 415663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415753:1
position: 415753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:415904-416179:1:exon

position:415904:1
position: 415904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416179:1
position: 416179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:417086-417235:1:exon

position:417086:1
position: 417086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417235:1
position: 417235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:420811-420925:1:exon

position:420811:1
position: 420811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420925:1
position: 420925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:421907-422014:1:exon

position:421907:1
position: 421907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422014:1
position: 422014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:422664-422776:1:exon

position:422664:1
position: 422664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422776:1
position: 422776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:423948-424055:1:exon

position:423948:1
position: 423948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424055:1
position: 424055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:424596-424726:1:exon

position:424596:1
position: 424596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424726:1
position: 424726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:425089-425287:1:exon

position:425089:1
position: 425089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425287:1
position: 425287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:430973-431119:1:exon

position:430973:1
position: 430973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431119:1
position: 431119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:431837-431993:1:exon

position:431837:1
position: 431837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431993:1
position: 431993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:432196-432299:1:exon

position:432196:1
position: 432196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432299:1
position: 432299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:433276-433339:1:exon

position:433276:1
position: 433276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433339:1
position: 433339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:434204-434238:1:exon

position:434204:1
position: 434204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434238:1
position: 434238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:435331-435435:1:exon

position:435331:1
position: 435331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435435:1
position: 435435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:436193-436356:1:exon

position:436193:1
position: 436193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436356:1
position: 436356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:437751-437898:1:exon

position:437751:1
position: 437751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437898:1
position: 437898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:440932-441072:1:exon

position:440932:1
position: 440932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441072:1
position: 441072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:441879-441953:1:exon

position:441879:1
position: 441879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441953:1
position: 441953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:442583-445164:1:exon

position:442583:1
position: 442583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLXND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: PLXND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-D1
translation: MAPAAVPAPAAGAEPRPPALLPLLLPLLPLLLPGRAAGLEVQRKFLSPTLTNNFALDGPGSRVYLAAVNRLFQLSGGELALEAEAAVGPVLDSPLCHAPQLPQASCEHPRVLTNNYNKILQPDPEQGVLVVCGSIYQGLCQLRSMANISAVAVHFPPGGSDSVAVFPSMLNVAANHPNASTVGLVLRRGGGGGARLLVAATYTGFGSPFFPRNRSLEDHRFENTPEIAIRALNARGDLAKLFTFDINPSDDNILKIKQGDKARHKLSFVRAFLQHGAAPPARRPYAYLALNTEANAGDKESPAHSLLARICLGEPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRLVSVFPARAAWRSPAAPHGPGLAPPPPEELLFGVFERAGAGGGRGRPQSALCVFRFAEIEETIRAARNSCFVSPAAGMVTVLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLAIVNPVTATPIFTYSGLTAVAVASVNNYTVVFLGTASGGLLKINLDSTMKVISRRSILVAYGEPVHPIMQFDPSDSTYLYLMTSYQMTRVKVAACSQYSTCTECLAAADAYCGWCTMETRCSLQHECTNFTGANFWASVSEGVQQCPSMTILEPEINIDKESPALIIQINGTIPNLNGTNISCDYGNNIHTVARVAGDYVNQFIYCSLLPHEKYPAFPDDQDHVVVETSLRVNNKNIIRANFTIYDCKRIGNIYPKRACTSCLSARWKCHWCPSAYSCVSNHSQCEDALRVEQKKIDCPQIVPAPLEPMPTGVSRNIMISLANATFSKETALECHFGTDGTFEARWVNSSAVECVHVLLHTSEKSHRFPVNLQLKDKPDRFIDSPEMMTVEVYNCATGSADCSQCLGREDLGHRCLWSESSSSCRLQTEPPQVSEACPPPEIRKIEPLRGPLEGGTLLTIRGRNLGRRFSDILGAVRVGGVHCAPLPDRYVVSETVVCQTGEAPEAFSDVVTVNVSREGRSRERYSYVLPVVQSIAPANGPKAGGTRVTIRGSRLDVGSELRVLINSSKQCTDLSRTDSTITCTMPAVELTTAVPVCVQFENKSCASHNITFKYEKNPVISDINPKKSQISGGRIITLEGRGFGLVQNVSMAVRGIGREHTRCKVHTDTAITCPSPAASNVTVGSKPAPVDFYLNGRLYSDERSALDEEMYSEEASHISKFSLGYYADPQFSTAKKEKWIKHHPGEPLTLVIHKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINESLSSSERQLPVTIQVGKFNYTIAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEECYILPSQQLSSQVGSQVQETHPLLVGEWKIPENCRPNMEEGISLFSTLLNNKHFLIVFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYSQWPRVEDVDLEWFATSTDSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDTTLSRVKDLDTEKYFHLVLPTDESVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIRDDKPPVAVKYFFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHIDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMPPLSEQEMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTTKRTQLQHKFEQVIALMEDNIYESCSEA
SIO_010081: PLXND1
subclass of: SO_0000673
so part of: PLXND1
location: join(374154..375497,391325..391501,394608..394739,396457..396557,397228..397357,397889..398063,399530..399638,400492..400594,403409..403516,405324..405413,406262..406355,408769..408932,409702..409853,410002..410101,413104..413243,413587..413754,415663..415753,415904..416179,417086..417235,420811..420925,421907..422014,422664..422776,423948..424055,424596..424726,425089..425287,430973..431119,431837..431993,432196..432299,433276..433339,434204..434238,435331..435435,436193..436356,437751..437898,440932..441072,441879..441953,442583..442699)
location: region:374154-442699:1
so has part: feature:374154-375497:1:exon
so has part: feature:391325-391501:1:exon
so has part: feature:394608-394739:1:exon
so has part: feature:396457-396557:1:exon
so has part: feature:397228-397357:1:exon
so has part: feature:397889-398063:1:exon
so has part: feature:399530-399638:1:exon
so has part: feature:400492-400594:1:exon
so has part: feature:403409-403516:1:exon
so has part: feature:405324-405413:1:exon
so has part: feature:406262-406355:1:exon
so has part: feature:408769-408932:1:exon
so has part: feature:409702-409853:1:exon
so has part: feature:410002-410101:1:exon
so has part: feature:413104-413243:1:exon
so has part: feature:413587-413754:1:exon
so has part: feature:415663-415753:1:exon
so has part: feature:415904-416179:1:exon
so has part: feature:417086-417235:1:exon
so has part: feature:420811-420925:1:exon
so has part: feature:421907-422014:1:exon
so has part: feature:422664-422776:1:exon
so has part: feature:423948-424055:1:exon
so has part: feature:424596-424726:1:exon
so has part: feature:425089-425287:1:exon
so has part: feature:430973-431119:1:exon
so has part: feature:431837-431993:1:exon
so has part: feature:432196-432299:1:exon
so has part: feature:433276-433339:1:exon
so has part: feature:434204-434238:1:exon
so has part: feature:435331-435435:1:exon
so has part: feature:436193-436356:1:exon
so has part: feature:437751-437898:1:exon
so has part: feature:440932-441072:1:exon
so has part: feature:441879-441953:1:exon
so has part: feature:442583-442699:1:exon

XP_053809870.1
type: Protein
SIO_000068: ncbiprotein

position:442699:1
position: 442699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374154-375497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391325-391501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394608-394739:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396457-396557:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397228-397357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:397889-398063:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399530-399638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:400492-400594:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403409-403516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405324-405413:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:406262-406355:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:408769-408932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:409702-409853:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:410002-410101:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:413104-413243:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413587-413754:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:415663-415753:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:415904-416179:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:417086-417235:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:420811-420925:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:421907-422014:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:422664-422776:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:423948-424055:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:424596-424726:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:425089-425287:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:430973-431119:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:431837-431993:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:432196-432299:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:433276-433339:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:434204-434238:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:435331-435435:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:436193-436356:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:437751-437898:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:440932-441072:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:441879-441953:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:442583-442699:1:exon

LOC128794139
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794139
note: histone H1.8; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(446435..448341)
location: region:446435-448341:-1
so has part: feature:446435-448341:-1:exon
subclass of: SO_0000010

128794139
type: Gene
SIO_000068: ncbigene

position:446435:-1
position: 446435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448341:-1
position: 448341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446435-448341:-1:exon

LOC128794139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794139
product: histone H1.8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_053953802.1
SIO_010081: LOC128794139
subclass of: SO_0000673
so part of: LOC128794139
location: complement(join(446435..447300,447378..447415,447492..447624,447704..448341))
location: region:446435-448341:-1
so has part: feature:447704-448341:-1:exon
so has part: feature:447492-447624:-1:exon
so has part: feature:447378-447415:-1:exon
so has part: feature:446435-447300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447704-448341:-1:exon

position:447704:-1
position: 447704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447492-447624:-1:exon

position:447492:-1
position: 447492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447624:-1
position: 447624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447378-447415:-1:exon

position:447378:-1
position: 447378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447415:-1
position: 447415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:446435-447300:-1:exon

position:447300:-1
position: 447300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1.8
translation: MVPLPAAKAAGIAPRSQAQHPPTLQMVKEALRAHDEKKGASVVAIKRFILAKYPTVDPIRLKYLLKQALSKGLSCGDLVRPQNSSSVGATGTFKLALRKSGQKQQLGQAHPDRGQAPNPGQKGTTKEPQAPVAGARPRGAAKQQPKAKPVNAQPRAAGKPRREKAKHPQTADRPRAHGPGPSGPPKAAGHRQAPRKGRSGPSTARAAENAGGSDSDSSGSAGVKGPQKAPRGKSKGKVPKGEQQDAPKAQGGQGQAKKKPRVTPGAGQGKARMKKAASVAADRKAP
SIO_010081: LOC128794139
subclass of: SO_0000673
so part of: LOC128794139
location: complement(join(446893..447300,447378..447415,447492..447624,447704..447985))
location: region:446893-447985:-1
so has part: feature:447704-447985:-1:exon
so has part: feature:447492-447624:-1:exon
so has part: feature:447378-447415:-1:exon
so has part: feature:446893-447300:-1:exon

XP_053809777.1
type: Protein
SIO_000068: ncbiprotein

position:446893:-1
position: 446893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447985:-1
position: 447985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447704-447985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447492-447624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447378-447415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446893-447300:-1:exon

RHO
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: RHO
note: rhodopsin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(451074..453801)
location: region:451074-453801:-1
so has part: feature:451074-453801:-1:exon
subclass of: SO_0000010

128794040
type: Gene
SIO_000068: ncbigene

position:451074:-1
position: 451074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453801:-1
position: 453801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451074-453801:-1:exon

RHO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: RHO
product: rhodopsin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 Proteins
transcript id: XM_053953618.1
SIO_010081: RHO
subclass of: SO_0000673
so part of: RHO
location: complement(join(451074..451193,451602..451841,452067..452232,452347..452515,453441..453801))
location: region:451074-453801:-1
so has part: feature:453441-453801:-1:exon
so has part: feature:452347-452515:-1:exon
so has part: feature:452067-452232:-1:exon
so has part: feature:451602-451841:-1:exon
so has part: feature:451074-451193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453441-453801:-1:exon

position:453441:-1
position: 453441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:452347-452515:-1:exon

position:452347:-1
position: 452347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452515:-1
position: 452515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:452067-452232:-1:exon

position:452067:-1
position: 452067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452232:-1
position: 452232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:451602-451841:-1:exon

position:451602:-1
position: 451602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451841:-1
position: 451841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451074-451193:-1:exon

position:451193:-1
position: 451193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RHO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: RHO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhodopsin
translation: MNGTEGQDFYVPMSNKTGVVRSPFEYPQYYLAEPWKYSALAAYMFMLILLGFPVNFLTLYVTIQHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMNGYFVFGVTGCYIEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFSWIMALACAAPPLFGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFMIPLSIIFFCYGNLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMITTLCCGKNPLGDEDTSAGKTETSSVSTSQVSPA
SIO_010081: RHO
subclass of: SO_0000673
so part of: RHO
location: complement(join(451074..451193,451602..451841,452067..452232,452347..452515,453441..453801))
location: region:451074-453801:-1
so has part: feature:453441-453801:-1:exon
so has part: feature:452347-452515:-1:exon
so has part: feature:452067-452232:-1:exon
so has part: feature:451602-451841:-1:exon
so has part: feature:451074-451193:-1:exon

XP_053809593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453441-453801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452347-452515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452067-452232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451602-451841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451074-451193:-1:exon

IFT122
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: IFT122
note: intraflagellar transport 122; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(457398..489758)
location: region:457398-489758:-1
so has part: feature:457398-489758:-1:exon
subclass of: SO_0000010

128794188
type: Gene
SIO_000068: ncbigene

position:457398:-1
position: 457398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489758:-1
position: 489758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457398-489758:-1:exon

IFT122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: IFT122
product: intraflagellar transport 122, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953879.1
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(457398..457837,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489758))
location: region:457398-489758:-1
so has part: feature:489649-489758:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:457398-457837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489758:-1:exon

position:489649:-1
position: 489649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

position:489385:-1
position: 489385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489451:-1
position: 489451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

position:486068:-1
position: 486068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486152:-1
position: 486152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

position:485182:-1
position: 485182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485260:-1
position: 485260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

position:484360:-1
position: 484360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484436:-1
position: 484436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

position:483867:-1
position: 483867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483933:-1
position: 483933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

position:482933:-1
position: 482933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483079:-1
position: 483079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

position:482121:-1
position: 482121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482196:-1
position: 482196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

position:481398:-1
position: 481398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481589:-1
position: 481589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

position:480585:-1
position: 480585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480723:-1
position: 480723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

position:479788:-1
position: 479788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479990:-1
position: 479990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

position:479180:-1
position: 479180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479317:-1
position: 479317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

position:478295:-1
position: 478295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478459:-1
position: 478459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

position:477243:-1
position: 477243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477440:-1
position: 477440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

position:475543:-1
position: 475543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475683:-1
position: 475683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

position:473816:-1
position: 473816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473869:-1
position: 473869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

position:471407:-1
position: 471407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471568:-1
position: 471568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

position:468543:-1
position: 468543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468709:-1
position: 468709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

position:467505:-1
position: 467505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467676:-1
position: 467676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

position:466843:-1
position: 466843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466945:-1
position: 466945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

position:465179:-1
position: 465179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465319:-1
position: 465319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

position:464113:-1
position: 464113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464210:-1
position: 464210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

position:463139:-1
position: 463139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463239:-1
position: 463239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

position:461835:-1
position: 461835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462000:-1
position: 462000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

position:460752:-1
position: 460752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460863:-1
position: 460863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

position:460222:-1
position: 460222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460350:-1
position: 460350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

position:459314:-1
position: 459314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459393:-1
position: 459393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:457398-457837:-1:exon

position:457837:-1
position: 457837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFT122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: IFT122
product: intraflagellar transport 122, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953877.1
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(457398..457837,458523..458684,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489758))
location: region:457398-489758:-1
so has part: feature:489649-489758:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:458523-458684:-1:exon
so has part: feature:457398-457837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:458523-458684:-1:exon

position:458523:-1
position: 458523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458684:-1
position: 458684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:457398-457837:-1:exon

IFT122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: IFT122
product: intraflagellar transport 122, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953876.1
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(457398..457837,458523..458687,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489758))
location: region:457398-489758:-1
so has part: feature:489649-489758:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:458523-458687:-1:exon
so has part: feature:457398-457837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:458523-458687:-1:exon

position:458687:-1
position: 458687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:457398-457837:-1:exon

IFT122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: IFT122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 122 homolog isoform X4
translation: MRAALTWRDRAEQCIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSGDFGLWSPEQKSVSKHKTSCRITCCSWTNDGQYLALGMCNGIVSIRNKNGDEKVKIERPGGSSSPVWSICWNPSRDERNDILAVADWGQKLSFYHLSGKQIGKDRVLNFDPCCISYFTKGEYLLLGGSDRQVSLFTRDGVRLGTVGEQSSWVWTCKVKPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDNMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDSADMYYRVKEKIIKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNALAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDADWRELAMEALEGLEFETAKKAFTRVRDLRYLELISSIEDRKKHGENNHELFLADVYAYQGKFHEAAKLYKRSGHENLALEMYSDLRMFDHAKEFLGSGNPKDTKMLIKKQADWAKDINEPKAAVEMYLSAGEHMKAIEISGDHGWVDMLIEIARKLDKAEREPLAKCAFYFKQLDNPGYAAETYMKVGDLKALVQLHVETHRWEEAFALSEKHPEFKDEVYVPYAQWLAESDRFEEAQKAFHKAGRQREAVRVLEQLTHNAVLESRFDDAAYYYWMLSMQCLDIAQENEGQQTEMLQKFHHFQHLAEVYHVYHFIQRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLLALAKQSKALGAYKLARHAYDKLQGLQIPDRFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNICINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRVSKREDKWQEMTTDHAESLRLDDSTDTIEDDDPFTAKLSFEMFHTEDYELLILQHNCCPFCRRRVDESSQ
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(457748..457837,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489689))
location: region:457748-489689:-1
so has part: feature:489649-489689:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:457748-457837:-1:exon

XP_053809854.1
type: Protein
SIO_000068: ncbiprotein

position:457748:-1
position: 457748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489689:-1
position: 489689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:457748-457837:-1:exon

IFT122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: IFT122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 122 homolog isoform X2
translation: MRAALTWRDRAEQCIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSGDFGLWSPEQKSVSKHKTSCRITCCSWTNDGQYLALGMCNGIVSIRNKNGDEKVKIERPGGSSSPVWSICWNPSRDERNDILAVADWGQKLSFYHLSGKQIGKDRVLNFDPCCISYFTKGEYLLLGGSDRQVSLFTRDGVRLGTVGEQSSWVWTCKVKPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDNMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDSADMYYRVKEKIIKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNALAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDADWRELAMEALEGLEFETAKKAFTRVRDLRYLELISSIEDRKKHGENNHELFLADVYAYQGKFHEAAKLYKRSGHENLALEMYSDLRMFDHAKEFLGSGNPKDTKMLIKKQADWAKDINEPKAAVEMYLSAGEHMKAIEISGDHGWVDMLIEIARKLDKAEREPLAKCAFYFKQLDNPGYAAETYMKVGDLKALVQLHVETHRWEEAFALSEKHPEFKDEVYVPYAQWLAESDRFEEAQKAFHKAGRQREAVRVLEQLTHNAVLESRFDDAAYYYWMLSMQCLDIAQENEGQQTEMLQKFHHFQHLAEVYHVYHFIQRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLLALAKQSKALGAYKLARHAYDKLQGLQIPDRFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNICINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRVSKREDKWQEMTTDHAESLRLDDSTDTIEDDDPFTAKLSFEGGSAFVPVVVSRAVLRSLSRRDVLVKRWPRPLRWQYYRSLLPDASITMCPSCFQMFHTEDYELLILQHNCCPFCRRRVDESSQ
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(457748..457837,458523..458684,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489689))
location: region:457748-489689:-1
so has part: feature:489649-489689:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:458523-458684:-1:exon
so has part: feature:457748-457837:-1:exon

XP_053809852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:458523-458684:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457748-457837:-1:exon

IFT122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: IFT122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 122 homolog isoform X1
translation: MRAALTWRDRAEQCIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSGDFGLWSPEQKSVSKHKTSCRITCCSWTNDGQYLALGMCNGIVSIRNKNGDEKVKIERPGGSSSPVWSICWNPSRDERNDILAVADWGQKLSFYHLSGKQIGKDRVLNFDPCCISYFTKGEYLLLGGSDRQVSLFTRDGVRLGTVGEQSSWVWTCKVKPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDNMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDSADMYYRVKEKIIKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNALAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDADWRELAMEALEGLEFETAKKAFTRVRDLRYLELISSIEDRKKHGENNHELFLADVYAYQGKFHEAAKLYKRSGHENLALEMYSDLRMFDHAKEFLGSGNPKDTKMLIKKQADWAKDINEPKAAVEMYLSAGEHMKAIEISGDHGWVDMLIEIARKLDKAEREPLAKCAFYFKQLDNPGYAAETYMKVGDLKALVQLHVETHRWEEAFALSEKHPEFKDEVYVPYAQWLAESDRFEEAQKAFHKAGRQREAVRVLEQLTHNAVLESRFDDAAYYYWMLSMQCLDIAQENEGQQTEMLQKFHHFQHLAEVYHVYHFIQRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLLALAKQSKALGAYKLARHAYDKLQGLQIPDRFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNICINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRVSKREDKWQEMTTDHAESLRLDDSTDTIEDDDPFTAKLSFEQGGSAFVPVVVSRAVLRSLSRRDVLVKRWPRPLRWQYYRSLLPDASITMCPSCFQMFHTEDYELLILQHNCCPFCRRRVDESSQ
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(457748..457837,458523..458687,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489689))
location: region:457748-489689:-1
so has part: feature:489649-489689:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:458523-458687:-1:exon
so has part: feature:457748-457837:-1:exon

XP_053809851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:458523-458687:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457748-457837:-1:exon

IFT122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: IFT122
product: intraflagellar transport 122, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_053953878.1
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(457752..458522,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489758))
location: region:457752-489758:-1
so has part: feature:489649-489758:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:457752-458522:-1:exon

position:457752:-1
position: 457752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:457752-458522:-1:exon

position:458522:-1
position: 458522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFT122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: IFT122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 122 homolog isoform X3
translation: MRAALTWRDRAEQCIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSGDFGLWSPEQKSVSKHKTSCRITCCSWTNDGQYLALGMCNGIVSIRNKNGDEKVKIERPGGSSSPVWSICWNPSRDERNDILAVADWGQKLSFYHLSGKQIGKDRVLNFDPCCISYFTKGEYLLLGGSDRQVSLFTRDGVRLGTVGEQSSWVWTCKVKPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDNMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDSADMYYRVKEKIIKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNALAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDADWRELAMEALEGLEFETAKKAFTRVRDLRYLELISSIEDRKKHGENNHELFLADVYAYQGKFHEAAKLYKRSGHENLALEMYSDLRMFDHAKEFLGSGNPKDTKMLIKKQADWAKDINEPKAAVEMYLSAGEHMKAIEISGDHGWVDMLIEIARKLDKAEREPLAKCAFYFKQLDNPGYAAETYMKVGDLKALVQLHVETHRWEEAFALSEKHPEFKDEVYVPYAQWLAESDRFEEAQKAFHKAGRQREAVRVLEQLTHNAVLESRFDDAAYYYWMLSMQCLDIAQENEGQQTEMLQKFHHFQHLAEVYHVYHFIQRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLLALAKQSKALGAYKLARHAYDKLQGLQIPDRFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNICINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRVSKREDKWQEMTTDHAESLRLDDSTDTIEDDDPFTAKLSFEVLLHGELCKETEGPSQSLMGETVLTGETSYSEMYSANS
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(458406..458522,459314..459393,460222..460350,460752..460863,461835..462000,463139..463239,464113..464210,465179..465319,466843..466945,467505..467676,468543..468709,471407..471568,473816..473869,475543..475683,477243..477440,478295..478459,479180..479317,479788..479990,480585..480723,481398..481589,482121..482196,482933..483079,483867..483933,484360..484436,485182..485260,486068..486152,489385..489451,489649..489689))
location: region:458406-489689:-1
so has part: feature:489649-489689:-1:exon
so has part: feature:489385-489451:-1:exon
so has part: feature:486068-486152:-1:exon
so has part: feature:485182-485260:-1:exon
so has part: feature:484360-484436:-1:exon
so has part: feature:483867-483933:-1:exon
so has part: feature:482933-483079:-1:exon
so has part: feature:482121-482196:-1:exon
so has part: feature:481398-481589:-1:exon
so has part: feature:480585-480723:-1:exon
so has part: feature:479788-479990:-1:exon
so has part: feature:479180-479317:-1:exon
so has part: feature:478295-478459:-1:exon
so has part: feature:477243-477440:-1:exon
so has part: feature:475543-475683:-1:exon
so has part: feature:473816-473869:-1:exon
so has part: feature:471407-471568:-1:exon
so has part: feature:468543-468709:-1:exon
so has part: feature:467505-467676:-1:exon
so has part: feature:466843-466945:-1:exon
so has part: feature:465179-465319:-1:exon
so has part: feature:464113-464210:-1:exon
so has part: feature:463139-463239:-1:exon
so has part: feature:461835-462000:-1:exon
so has part: feature:460752-460863:-1:exon
so has part: feature:460222-460350:-1:exon
so has part: feature:459314-459393:-1:exon
so has part: feature:458406-458522:-1:exon

XP_053809853.1
type: Protein
SIO_000068: ncbiprotein

position:458406:-1
position: 458406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489649-489689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489385-489451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486068-486152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485182-485260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484360-484436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483867-483933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482933-483079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482121-482196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481398-481589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480585-480723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479788-479990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479180-479317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478295-478459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477243-477440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475543-475683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473816-473869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:471407-471568:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468543-468709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467505-467676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:466843-466945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:465179-465319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464113-464210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463139-463239:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461835-462000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460752-460863:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460222-460350:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:459314-459393:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:458406-458522:-1:exon

MBD4
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: MBD4
note: methyl-CpG binding domain 4, DNA glycosylase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <489924..493406
location: region:489924-493406:1
so has part: feature:489924-493406:1:exon
subclass of: SO_0000010

128794286
type: Gene
SIO_000068: ncbigene

position:489924:1
position: 489924
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:493406:1
position: 493406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489924-493406:1:exon

MBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: MBD4
product: methyl-CpG binding domain 4, DNA glycosylase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954034.1
SIO_010081: MBD4
subclass of: SO_0000673
so part of: MBD4
location: join(<489924..490306,490499..491283,491639..491713,491829..491963,492195..492344,492953..493056,493200..493406)
location: region:489924-493406:1
so has part: feature:489924-490306:1:exon
so has part: feature:490499-491283:1:exon
so has part: feature:491639-491713:1:exon
so has part: feature:491829-491963:1:exon
so has part: feature:492195-492344:1:exon
so has part: feature:492953-493056:1:exon
so has part: feature:493200-493406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489924-490306:1:exon

position:490306:1
position: 490306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490499-491283:1:exon

position:490499:1
position: 490499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491283:1
position: 491283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491639-491713:1:exon

position:491639:1
position: 491639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491713:1
position: 491713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491829-491963:1:exon

position:491829:1
position: 491829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491963:1
position: 491963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492195-492344:1:exon

position:492195:1
position: 492195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492344:1
position: 492344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:492953-493056:1:exon

position:492953:1
position: 492953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493056:1
position: 493056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:493200-493406:1:exon

position:493200:1
position: 493200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: MBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 4
translation: GAAASRERRAGDGGAGSGGRVRAERARSAGPATGPVTDPALAGVRAPPSPGLRRQQDLTGLFFPCSPGGGSRGAAADLIQAAERPGPSPGCRAREPAAPSAVPRGWQRVSSRRRAGRTAGRIDVYFISPEGKKLRSKRALVEYLQKTGETTLKAADFDFAAPRGSTCSGLRGCCTGAARTHLEKEDCQSKVQELHAQNDAEAGIQNTQAGNGHLEDAISTVEGTDLVVVGTNPEESLKTKRKRADGKTVQTRKCEKGSERRNRGDPKSKRQRRISNTRENKRVCRQTEARGADSQGVGEAGAEPAGAGKALSAMPRARLRSVAASHRDLGHLPKEGPCSSGTPAARPEEKSCGQVPAPGDLGRQDVSSDPEVDAEPWDGTSSAAGRTSPEESAPRTQVERRKTSPYFSSKYSKEAPSPPRRKALRKWTPPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTWLWENRERLSID
SIO_010081: MBD4
subclass of: SO_0000673
so part of: MBD4
location: join(<489924..490306,490499..491283,491639..491713,491829..491963,492195..492344,492953..493056,493200..493277)
location: region:489924-493277:1
so has part: feature:489924-490306:1:exon
so has part: feature:490499-491283:1:exon
so has part: feature:491639-491713:1:exon
so has part: feature:491829-491963:1:exon
so has part: feature:492195-492344:1:exon
so has part: feature:492953-493056:1:exon
so has part: feature:493200-493277:1:exon

XP_053810009.1
type: Protein
SIO_000068: ncbiprotein

position:493277:1
position: 493277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489924-490306:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490499-491283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491639-491713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491829-491963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492195-492344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492953-493056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493200-493277:1:exon

RPL32
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: RPL32
note: ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 493968..495798
location: region:493968-495798:1
so has part: feature:493968-495798:1:exon
subclass of: SO_0000010

128793895
type: Gene
SIO_000068: ncbigene

position:493968:1
position: 493968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495798:1
position: 495798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493968-495798:1:exon

RPL32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: RPL32
product: ribosomal protein L32
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953328.1
SIO_010081: RPL32
subclass of: SO_0000673
so part of: RPL32
location: join(493968..494055,494594..494694,494889..495070,495626..495798)
location: region:493968-495798:1
so has part: feature:493968-494055:1:exon
so has part: feature:494594-494694:1:exon
so has part: feature:494889-495070:1:exon
so has part: feature:495626-495798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493968-494055:1:exon

position:494055:1
position: 494055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494594-494694:1:exon

position:494594:1
position: 494594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494694:1
position: 494694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:494889-495070:1:exon

position:494889:1
position: 494889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495070:1
position: 495070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495626-495798:1:exon

position:495626:1
position: 495626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: RPL32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L32
translation: MPALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPTGFRKFLVHNVKELEVLMMSNKSYCAEIAHNVSSKNRKVIVERAAQLAIKITNPNARLRSEENE
SIO_010081: RPL32
subclass of: SO_0000673
so part of: RPL32
location: join(494599..494694,494889..495070,495626..495755)
location: region:494599-495755:1
so has part: feature:494599-494694:1:exon
so has part: feature:494889-495070:1:exon
so has part: feature:495626-495755:1:exon

XP_053809303.1
type: Protein
SIO_000068: ncbiprotein

position:494599:1
position: 494599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495755:1
position: 495755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494599-494694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494889-495070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495626-495755:1:exon

LOC128793892
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128793892
note: cullin-associated NEDD8-dissociated protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(495905..509390)
location: region:495905-509390:-1
so has part: feature:495905-509390:-1:exon
subclass of: SO_0000010

128793892
type: Gene
SIO_000068: ncbigene

position:495905:-1
position: 495905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509390:-1
position: 509390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495905-509390:-1:exon

LOC128793892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128793892
product: cullin-associated NEDD8-dissociated protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953323.1
SIO_010081: LOC128793892
subclass of: SO_0000673
so part of: LOC128793892
location: complement(join(495905..497275,498049..498213,498328..498497,499190..499285,499652..501157,501743..501884,502282..502574,502737..502882,503355..503460,504063..504319,504917..505040,505457..505611,506843..506986,509067..509387))
location: region:495905-509387:-1
so has part: feature:509067-509387:-1:exon
so has part: feature:506843-506986:-1:exon
so has part: feature:505457-505611:-1:exon
so has part: feature:504917-505040:-1:exon
so has part: feature:504063-504319:-1:exon
so has part: feature:503355-503460:-1:exon
so has part: feature:502737-502882:-1:exon
so has part: feature:502282-502574:-1:exon
so has part: feature:501743-501884:-1:exon
so has part: feature:499652-501157:-1:exon
so has part: feature:499190-499285:-1:exon
so has part: feature:498328-498497:-1:exon
so has part: feature:498049-498213:-1:exon
so has part: feature:495905-497275:-1:exon

position:509387:-1
position: 509387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509067-509387:-1:exon

position:509067:-1
position: 509067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506843-506986:-1:exon

position:506843:-1
position: 506843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506986:-1
position: 506986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505457-505611:-1:exon

position:505457:-1
position: 505457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505611:-1
position: 505611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504917-505040:-1:exon

position:504917:-1
position: 504917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505040:-1
position: 505040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:504063-504319:-1:exon

position:504063:-1
position: 504063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504319:-1
position: 504319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:503355-503460:-1:exon

position:503355:-1
position: 503355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503460:-1
position: 503460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:502737-502882:-1:exon

position:502737:-1
position: 502737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502882:-1
position: 502882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:502282-502574:-1:exon

position:502282:-1
position: 502282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502574:-1
position: 502574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:501743-501884:-1:exon

position:501743:-1
position: 501743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501884:-1
position: 501884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:499652-501157:-1:exon

position:499652:-1
position: 499652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501157:-1
position: 501157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:499190-499285:-1:exon

position:499190:-1
position: 499190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499285:-1
position: 499285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:498328-498497:-1:exon

position:498328:-1
position: 498328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498497:-1
position: 498497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:498049-498213:-1:exon

position:498049:-1
position: 498049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498213:-1
position: 498213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:495905-497275:-1:exon

position:497275:-1
position: 497275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128793892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128793892
product: cullin-associated NEDD8-dissociated protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953324.1
SIO_010081: LOC128793892
subclass of: SO_0000673
so part of: LOC128793892
location: complement(join(495905..497275,497481..497588,498049..498213,498328..498497,499190..499285,499652..501157,501743..501884,502282..502574,502737..502882,503355..503460,504063..504319,504917..505040,505457..505611,506843..506986,509067..509386))
location: region:495905-509386:-1
so has part: feature:509067-509386:-1:exon
so has part: feature:506843-506986:-1:exon
so has part: feature:505457-505611:-1:exon
so has part: feature:504917-505040:-1:exon
so has part: feature:504063-504319:-1:exon
so has part: feature:503355-503460:-1:exon
so has part: feature:502737-502882:-1:exon
so has part: feature:502282-502574:-1:exon
so has part: feature:501743-501884:-1:exon
so has part: feature:499652-501157:-1:exon
so has part: feature:499190-499285:-1:exon
so has part: feature:498328-498497:-1:exon
so has part: feature:498049-498213:-1:exon
so has part: feature:497481-497588:-1:exon
so has part: feature:495905-497275:-1:exon

position:509386:-1
position: 509386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509067-509386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506843-506986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505457-505611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504917-505040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504063-504319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503355-503460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502737-502882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502282-502574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501743-501884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499652-501157:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499190-499285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498328-498497:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498049-498213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497481-497588:-1:exon

position:497481:-1
position: 497481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497588:-1
position: 497588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:495905-497275:-1:exon

LOC128793892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128793892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-associated NEDD8-dissociated protein 1-like isoform X1
translation: MASVSYHISSLLEKMTSTDKDFRFMATNDLMMELQKDSIKLDEDSEKKVVKMLLKLLEDKNGEVQNLAVKCLGPLVGKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVISELPPAATGSTMTANVCKKITAQLTGAIGKQEDVSVQLEALDILSDMLSRLGGTLYSFHSSILTCLLPQLTSPRLAVRKRAIIALGHLVLTCSSNIFSELTEHLLAELKRNESTSTTRTYIQCVAGISRQAGHRIGEHLEKIIPLIVQYCNVDDDELREYCFQAFESFVRRCPKEMDPHISSVMGLCLKYITFDPNYNYDNEEEEEEMMETENGEDEEQESDDEYSDDDDISWKVRRAAAKCLEAIVSSRHDLLQDFYRTLSPALISRFKEREENVKADIFNAYISLLKQTLPTQSWLHSSDTSGKDDVPLTMLQNQVPNIIKALHKQLKEKSIKSRQGCFSLLTELASVLPACLADHIPALIPGIVFSLADKSSSSNMRIDTLSFLHVLLCNHQPEVFHPHVKALLPSVVTCIGDPFYKITSEALLVTQQLVKVIRPLDKPYTFDAKPYVKDLLPGTLKRLKAADIDQEVKERAISCMGQIIYNLGDHLSTDLQPTLKIFLERLKNEITRLTTVKALTLIASSPLKIDLRPILGEGLPILASFLRKNQRALKLSTLNALDILVKNYSESLKPAMIEAVLTELPVLITENDMHVSQVTIMFLTTLAKVYPTCISKISGSVLAEIFQLVHSPLLQGGALNAIIDFFQALVLTKTAAMGYPELMKQLTAPVYSSGSAGASLTLHKQAYHSIAKCMAALSSACPKEAPATVNQFVQDVKSPKSSPAVQVLAFLFLAEVGRTTNLSAQRELRTVILEAFSSPSEEVKSAASYALGNVSAGNLKEYLPFMLKEIGSQPKRQYLLLHSLKEVISCSPADSLTPYVEDIWALLFKHCECTEEGTRNVVAECLGKLTLVNPAELLPRLRKQLSAGSPHARSTVVTAIKFTITDQPQPIDALLKGCIGDFLRTLQDPDLNVRRVALALFNSAAHNKPSLIRDLLSTVLPSLYNETKVRRELIREVEMGPFKHTVDDGLDVRKAAFECMYTLLESCLDRLDIYDYLNHVEDGLKDHYDIRVKAGSVKQEFEKQDELKRSAMRAVAALLTIPEVEKSPAMAEFSSQIRSSPEMASLFESIQKDSASLPTSESMDMS
SIO_010081: LOC128793892
subclass of: SO_0000673
so part of: LOC128793892
location: complement(join(497048..497275,498049..498213,498328..498497,499190..499285,499652..501157,501743..501884,502282..502574,502737..502882,503355..503460,504063..504319,504917..505040,505457..505611,506843..506986,509067..509134))
location: region:497048-509134:-1
so has part: feature:509067-509134:-1:exon
so has part: feature:506843-506986:-1:exon
so has part: feature:505457-505611:-1:exon
so has part: feature:504917-505040:-1:exon
so has part: feature:504063-504319:-1:exon
so has part: feature:503355-503460:-1:exon
so has part: feature:502737-502882:-1:exon
so has part: feature:502282-502574:-1:exon
so has part: feature:501743-501884:-1:exon
so has part: feature:499652-501157:-1:exon
so has part: feature:499190-499285:-1:exon
so has part: feature:498328-498497:-1:exon
so has part: feature:498049-498213:-1:exon
so has part: feature:497048-497275:-1:exon

XP_053809298.1
type: Protein
SIO_000068: ncbiprotein

position:497048:-1
position: 497048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509134:-1
position: 509134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509067-509134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506843-506986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505457-505611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504917-505040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504063-504319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503355-503460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502737-502882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502282-502574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501743-501884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499652-501157:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499190-499285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498328-498497:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498049-498213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497048-497275:-1:exon

LOC128793892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128793892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-associated NEDD8-dissociated protein 1-like isoform X2
translation: MASVSYHISSLLEKMTSTDKDFRFMATNDLMMELQKDSIKLDEDSEKKVVKMLLKLLEDKNGEVQNLAVKCLGPLVGKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVISELPPAATGSTMTANVCKKITAQLTGAIGKQEDVSVQLEALDILSDMLSRLGGTLYSFHSSILTCLLPQLTSPRLAVRKRAIIALGHLVLTCSSNIFSELTEHLLAELKRNESTSTTRTYIQCVAGISRQAGHRIGEHLEKIIPLIVQYCNVDDDELREYCFQAFESFVRRCPKEMDPHISSVMGLCLKYITFDPNYNYDNEEEEEEMMETENGEDEEQESDDEYSDDDDISWKVRRAAAKCLEAIVSSRHDLLQDFYRTLSPALISRFKEREENVKADIFNAYISLLKQTLPTQSWLHSSDTSGKDDVPLTMLQNQVPNIIKALHKQLKEKSIKSRQGCFSLLTELASVLPACLADHIPALIPGIVFSLADKSSSSNMRIDTLSFLHVLLCNHQPEVFHPHVKALLPSVVTCIGDPFYKITSEALLVTQQLVKVIRPLDKPYTFDAKPYVKDLLPGTLKRLKAADIDQEVKERAISCMGQIIYNLGDHLSTDLQPTLKIFLERLKNEITRLTTVKALTLIASSPLKIDLRPILGEGLPILASFLRKNQRALKLSTLNALDILVKNYSESLKPAMIEAVLTELPVLITENDMHVSQVTIMFLTTLAKVYPTCISKISGSVLAEIFQLVHSPLLQGGALNAIIDFFQALVLTKTAAMGYPELMKQLTAPVYSSGSAGASLTLHKQAYHSIAKCMAALSSACPKEAPATVNQFVQDVKSPKSSPAVQVLAFLFLAEVGRTTNLSAQRELRTVILEAFSSPSEEVKSAASYALGNVSAGNLKEYLPFMLKEIGSQPKRQYLLLHSLKEVISCSPADSLTPYVEDIWALLFKHCECTEEGTRNVVAECLGKLTLVNPAELLPRLRKQLSAGSPHARSTVVTAIKFTITDQPQPIDALLKGCIGDFLRTLQDPDLNVRRVALALFNSAAHNKPSLIRDLLSTVLPSLYNETKVRRELIREVEMGPFKHTVDDGLDVRKAAFECMYTLLESCLDRLDIYDYLNHVEDGLKDHYDIRMLTFIMLARLSVLCPNAVLQRLERLIEPLRATCSTKVKAGSVKQEFEKQDELKRSAMRAVAALLTIPEVEKSPAMAEFSSQIRSSPEMASLFESIQKDSASLPTSESMDMS
SIO_010081: LOC128793892
subclass of: SO_0000673
so part of: LOC128793892
location: complement(join(497048..497275,497481..497588,498049..498213,498328..498497,499190..499285,499652..501157,501743..501884,502282..502574,502737..502882,503355..503460,504063..504319,504917..505040,505457..505611,506843..506986,509067..509134))
location: region:497048-509134:-1
so has part: feature:509067-509134:-1:exon
so has part: feature:506843-506986:-1:exon
so has part: feature:505457-505611:-1:exon
so has part: feature:504917-505040:-1:exon
so has part: feature:504063-504319:-1:exon
so has part: feature:503355-503460:-1:exon
so has part: feature:502737-502882:-1:exon
so has part: feature:502282-502574:-1:exon
so has part: feature:501743-501884:-1:exon
so has part: feature:499652-501157:-1:exon
so has part: feature:499190-499285:-1:exon
so has part: feature:498328-498497:-1:exon
so has part: feature:498049-498213:-1:exon
so has part: feature:497481-497588:-1:exon
so has part: feature:497048-497275:-1:exon

XP_053809299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509067-509134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506843-506986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505457-505611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504917-505040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504063-504319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503355-503460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502737-502882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502282-502574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501743-501884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499652-501157:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499190-499285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498328-498497:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498049-498213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497481-497588:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:497048-497275:-1:exon

LOC128793892
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: LOC128793892
product: cullin-associated NEDD8-dissociated protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XR_008432929.1
SIO_010081: LOC128793892
so part of: LOC128793892
location: complement(join(498415..498497,498747..498974,499190..499285,499652..501157,501743..501884,502282..502574,502737..502882,503355..503460,504063..504319,504917..505040,505457..505611,506843..506986,509067..509390))
location: region:498415-509390:-1
so has part: feature:509067-509390:-1:exon
so has part: feature:506843-506986:-1:exon
so has part: feature:505457-505611:-1:exon
so has part: feature:504917-505040:-1:exon
so has part: feature:504063-504319:-1:exon
so has part: feature:503355-503460:-1:exon
so has part: feature:502737-502882:-1:exon
so has part: feature:502282-502574:-1:exon
so has part: feature:501743-501884:-1:exon
so has part: feature:499652-501157:-1:exon
so has part: feature:499190-499285:-1:exon
so has part: feature:498747-498974:-1:exon
so has part: feature:498415-498497:-1:exon

position:498415:-1
position: 498415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509067-509390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506843-506986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505457-505611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504917-505040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504063-504319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503355-503460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502737-502882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502282-502574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501743-501884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499652-501157:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499190-499285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498747-498974:-1:exon

position:498747:-1
position: 498747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498974:-1
position: 498974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:498415-498497:-1:exon

SEC13
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: SEC13
note: SEC13 homolog, nuclear pore and COPII coat complex component; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 509406..515735
location: region:509406-515735:1
so has part: feature:509406-515735:1:exon
subclass of: SO_0000010

128793894
type: Gene
SIO_000068: ncbigene

position:509406:1
position: 509406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515735:1
position: 515735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509406-515735:1:exon

SEC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SEC13
product: SEC13 homolog, nuclear pore and COPII coat complex component, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953325.1
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(509406..509490,509731..509775,510732..510847,511255..511406,511956..512089,512851..512984,513470..513590,514347..514493,514860..515735)
location: region:509406-515735:1
so has part: feature:509406-509490:1:exon
so has part: feature:509731-509775:1:exon
so has part: feature:510732-510847:1:exon
so has part: feature:511255-511406:1:exon
so has part: feature:511956-512089:1:exon
so has part: feature:512851-512984:1:exon
so has part: feature:513470-513590:1:exon
so has part: feature:514347-514493:1:exon
so has part: feature:514860-515735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509406-509490:1:exon

position:509490:1
position: 509490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509731-509775:1:exon

position:509731:1
position: 509731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509775:1
position: 509775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:510732-510847:1:exon

position:510732:1
position: 510732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510847:1
position: 510847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:511255-511406:1:exon

position:511255:1
position: 511255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511406:1
position: 511406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:511956-512089:1:exon

position:511956:1
position: 511956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512089:1
position: 512089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:512851-512984:1:exon

position:512851:1
position: 512851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512984:1
position: 512984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:513470-513590:1:exon

position:513470:1
position: 513470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513590:1
position: 513590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:514347-514493:1:exon

position:514347:1
position: 514347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514493:1
position: 514493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:514860-515735:1:exon

position:514860:1
position: 514860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SEC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SEC13 homolog isoform X1
translation: MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTEGQQNEQ
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(509488..509490,509731..509775,510732..510847,511255..511406,511956..512089,512851..512984,513470..513590,514347..514493,514860..514970)
location: region:509488-514970:1
so has part: feature:509488-509490:1:exon
so has part: feature:509731-509775:1:exon
so has part: feature:510732-510847:1:exon
so has part: feature:511255-511406:1:exon
so has part: feature:511956-512089:1:exon
so has part: feature:512851-512984:1:exon
so has part: feature:513470-513590:1:exon
so has part: feature:514347-514493:1:exon
so has part: feature:514860-514970:1:exon

XP_053809300.1
type: Protein
SIO_000068: ncbiprotein

position:509488:1
position: 509488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514970:1
position: 514970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509488-509490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:509731-509775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:510732-510847:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511255-511406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:511956-512089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:512851-512984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:513470-513590:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514347-514493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514860-514970:1:exon

SEC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SEC13
product: SEC13 homolog, nuclear pore and COPII coat complex component, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953326.1
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(509550..509575,509731..509775,510732..510847,511255..511406,511956..512089,512851..512984,513470..513590,514347..514493,514860..515735)
location: region:509550-515735:1
so has part: feature:509550-509575:1:exon
so has part: feature:509731-509775:1:exon
so has part: feature:510732-510847:1:exon
so has part: feature:511255-511406:1:exon
so has part: feature:511956-512089:1:exon
so has part: feature:512851-512984:1:exon
so has part: feature:513470-513590:1:exon
so has part: feature:514347-514493:1:exon
so has part: feature:514860-515735:1:exon

position:509550:1
position: 509550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509550-509575:1:exon

position:509575:1
position: 509575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509731-509775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:510732-510847:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511255-511406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:511956-512089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:512851-512984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:513470-513590:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514347-514493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514860-515735:1:exon

SEC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SEC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SEC13 homolog isoform X2
translation: MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTEGQQNEQ
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(509770..509775,510732..510847,511255..511406,511956..512089,512851..512984,513470..513590,514347..514493,514860..514970)
location: region:509770-514970:1
so has part: feature:509770-509775:1:exon
so has part: feature:510732-510847:1:exon
so has part: feature:511255-511406:1:exon
so has part: feature:511956-512089:1:exon
so has part: feature:512851-512984:1:exon
so has part: feature:513470-513590:1:exon
so has part: feature:514347-514493:1:exon
so has part: feature:514860-514970:1:exon

XP_053809301.1
type: Protein
SIO_000068: ncbiprotein

position:509770:1
position: 509770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509770-509775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510732-510847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511255-511406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511956-512089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512851-512984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513470-513590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514347-514493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514860-514970:1:exon

IRAK2
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: IRAK2
note: interleukin 1 receptor associated kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516442..529604)
location: region:516442-529604:-1
so has part: feature:516442-529604:-1:exon
subclass of: SO_0000010

128794239
type: Gene
SIO_000068: ncbigene

position:516442:-1
position: 516442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529604:-1
position: 529604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516442-529604:-1:exon

IRAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: IRAK2
product: interleukin 1 receptor associated kinase 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953974.1
SIO_010081: IRAK2
subclass of: SO_0000673
so part of: IRAK2
location: complement(join(516442..518690,518982..519480,519646..519846,520873..520935,521610..521805,522172..522281,522568..522682,523129..523193,523617..523811,525352..525464,526176..526340,527644..527823,529166..529604))
location: region:516442-529604:-1
so has part: feature:529166-529604:-1:exon
so has part: feature:527644-527823:-1:exon
so has part: feature:526176-526340:-1:exon
so has part: feature:525352-525464:-1:exon
so has part: feature:523617-523811:-1:exon
so has part: feature:523129-523193:-1:exon
so has part: feature:522568-522682:-1:exon
so has part: feature:522172-522281:-1:exon
so has part: feature:521610-521805:-1:exon
so has part: feature:520873-520935:-1:exon
so has part: feature:519646-519846:-1:exon
so has part: feature:518982-519480:-1:exon
so has part: feature:516442-518690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529166-529604:-1:exon

position:529166:-1
position: 529166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527644-527823:-1:exon

position:527644:-1
position: 527644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527823:-1
position: 527823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526176-526340:-1:exon

position:526176:-1
position: 526176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526340:-1
position: 526340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:525352-525464:-1:exon

position:525352:-1
position: 525352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525464:-1
position: 525464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:523617-523811:-1:exon

position:523617:-1
position: 523617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523811:-1
position: 523811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523129-523193:-1:exon

position:523129:-1
position: 523129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523193:-1
position: 523193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:522568-522682:-1:exon

position:522568:-1
position: 522568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522682:-1
position: 522682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:522172-522281:-1:exon

position:522172:-1
position: 522172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522281:-1
position: 522281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:521610-521805:-1:exon

position:521610:-1
position: 521610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521805:-1
position: 521805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:520873-520935:-1:exon

position:520873:-1
position: 520873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520935:-1
position: 520935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:519646-519846:-1:exon

position:519646:-1
position: 519646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519846:-1
position: 519846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:518982-519480:-1:exon

position:518982:-1
position: 518982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519480:-1
position: 519480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:516442-518690:-1:exon

position:518690:-1
position: 518690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: IRAK2
product: interleukin 1 receptor associated kinase 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953973.1
SIO_010081: IRAK2
subclass of: SO_0000673
so part of: IRAK2
location: complement(join(516442..518690,518982..519480,519646..519846,520873..520935,521610..521805,522172..522281,522568..522682,523129..523193,523617..523784,525352..525464,526176..526340,527644..527823,529166..529366))
location: region:516442-529366:-1
so has part: feature:529166-529366:-1:exon
so has part: feature:527644-527823:-1:exon
so has part: feature:526176-526340:-1:exon
so has part: feature:525352-525464:-1:exon
so has part: feature:523617-523784:-1:exon
so has part: feature:523129-523193:-1:exon
so has part: feature:522568-522682:-1:exon
so has part: feature:522172-522281:-1:exon
so has part: feature:521610-521805:-1:exon
so has part: feature:520873-520935:-1:exon
so has part: feature:519646-519846:-1:exon
so has part: feature:518982-519480:-1:exon
so has part: feature:516442-518690:-1:exon

position:529366:-1
position: 529366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529166-529366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527644-527823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526176-526340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525352-525464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523617-523784:-1:exon

position:523784:-1
position: 523784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523129-523193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522568-522682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522172-522281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521610-521805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:520873-520935:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519646-519846:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:518982-519480:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:516442-518690:-1:exon

IRAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: IRAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-associated kinase-like 2 isoform X1
translation: MALRQPPLALRAGSGPALYIHSMPAWVLEDFCQKMDCLSDYDWMRFASYVITDQTELRKIKCMEKTGISITRELMWWWGVRLATVQQLLDLLQGLQLYRAAQVILDWTSASSITSPEKEEPEPPKPIISAPPTEGKGRDKENAMSLLPSPDSSHLGAVPAGISGAVSEGALYSLPAPPPPPRDLLNSLQSNPPVLSSVKETMADLPSGSLLWTQREIANATNSFSDKNRICEGTFADIYKGQRNNMVFVIKRLKELECTSPNSTQRFFHSEVQICFRCCHINILQLLGFSVETGLHCLIYPYLPNGSLQNKLQCHDDSAPLTWEIRISISLGVVRAVEYLHNFGILHGNIKSSNVLLDENFTPKLGHSGLRLHSSEKKSEYAMMKTKVLQASLTYLPEDFVRHGQLTAKVDIFSCGVVLAEILTGIKALDEDRHPIYLKDMIADEIQTAKENSNSKVKNLEKLAAKEICCKYLDRKAGHLLEEVAVDFASAICFCLRKKNLNIAEVRETMEMAENKLKDHYICGSSTSGFSMNTPEETDDETASVSVDVPSAAGNKEESRQAAVLTGGSPCAPSAGAAAPDTYGTYVSRVPCESDESSSFVWNPPEKSTGDLPSRKCTNSEKVAVCDGSIKQGKPAQRLQERSLACAGGDGILETAAAAQGNTELDACAPQALARETSWKIQINDQKKKLMENILLYEEDKINSSELFES
SIO_010081: IRAK2
subclass of: SO_0000673
so part of: IRAK2
location: complement(join(518572..518690,518982..519480,519646..519846,520873..520935,521610..521805,522172..522281,522568..522682,523129..523193,523617..523784,525352..525464,526176..526340,527644..527823,529166..529304))
location: region:518572-529304:-1
so has part: feature:529166-529304:-1:exon
so has part: feature:527644-527823:-1:exon
so has part: feature:526176-526340:-1:exon
so has part: feature:525352-525464:-1:exon
so has part: feature:523617-523784:-1:exon
so has part: feature:523129-523193:-1:exon
so has part: feature:522568-522682:-1:exon
so has part: feature:522172-522281:-1:exon
so has part: feature:521610-521805:-1:exon
so has part: feature:520873-520935:-1:exon
so has part: feature:519646-519846:-1:exon
so has part: feature:518982-519480:-1:exon
so has part: feature:518572-518690:-1:exon

XP_053809948.1
type: Protein
SIO_000068: ncbiprotein

position:518572:-1
position: 518572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529304:-1
position: 529304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529166-529304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527644-527823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526176-526340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525352-525464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523617-523784:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523129-523193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522568-522682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522172-522281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521610-521805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:520873-520935:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519646-519846:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:518982-519480:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518572-518690:-1:exon

IRAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: IRAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-associated kinase-like 2 isoform X2
translation: MALRQPPLALRAGSGPALYIHSMPAWVLEDFCQKMDCLSDYDWMRFASYVITDQTELRKIKCMEKTGISITRELMWWWGVRLATVQQLLDLLQGLQLYRAAQVILDWTSASSITSPEKEEPEPPKPIISAPPTEGKGRDKENAMSLLPSPDSSHLGAVPAGISGAVSEGALYSLPAPPPPPRDLLNSLQSNPPVLSSVKPCSSSTPQQETMADLPSGSLLWTQREIANATNSFSDKNRICEGTFADIYKGQRNNMVFVIKRLKELECTSPNSTQRFFHSEVQICFRCCHINILQLLGFSVETGLHCLIYPYLPNGSLQNKLQCHDDSAPLTWEIRISISLGVVRAVEYLHNFGILHGNIKSSNVLLDENFTPKLGHSGLRLHSSEKKSEYAMMKTKVLQASLTYLPEDFVRHGQLTAKVDIFSCGVVLAEILTGIKALDEDRHPIYLKDMIADEIQTAKENSNSKVKNLEKLAAKEICCKYLDRKAGHLLEEVAVDFASAICFCLRKKNLNIAEVRETMEMAENKLKDHYICGSSTSGFSMNTPEETDDETASVSVDVPSAAGNKEESRQAAVLTGGSPCAPSAGAAAPDTYGTYVSRVPCESDESSSFVWNPPEKSTGDLPSRKCTNSEKVAVCDGSIKQGKPAQRLQERSLACAGGDGILETAAAAQGNTELDACAPQALARETSWKIQINDQKKKLMENILLYEEDKINSSELFES
SIO_010081: IRAK2
subclass of: SO_0000673
so part of: IRAK2
location: complement(join(518572..518690,518982..519480,519646..519846,520873..520935,521610..521805,522172..522281,522568..522682,523129..523193,523617..523811,525352..525464,526176..526340,527644..527823,529166..529304))
location: region:518572-529304:-1
so has part: feature:529166-529304:-1:exon
so has part: feature:527644-527823:-1:exon
so has part: feature:526176-526340:-1:exon
so has part: feature:525352-525464:-1:exon
so has part: feature:523617-523811:-1:exon
so has part: feature:523129-523193:-1:exon
so has part: feature:522568-522682:-1:exon
so has part: feature:522172-522281:-1:exon
so has part: feature:521610-521805:-1:exon
so has part: feature:520873-520935:-1:exon
so has part: feature:519646-519846:-1:exon
so has part: feature:518982-519480:-1:exon
so has part: feature:518572-518690:-1:exon

XP_053809949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529166-529304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527644-527823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526176-526340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525352-525464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523617-523811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523129-523193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522568-522682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522172-522281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521610-521805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:520873-520935:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519646-519846:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:518982-519480:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518572-518690:-1:exon

VHL
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: VHL
note: von Hippel-Lindau tumor suppressor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531410..534472)
location: region:531410-534472:-1
so has part: feature:531410-534472:-1:exon
subclass of: SO_0000010

128794291
type: Gene
SIO_000068: ncbigene

position:531410:-1
position: 531410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534472:-1
position: 534472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531410-534472:-1:exon

VHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: VHL
product: von Hippel-Lindau tumor suppressor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954039.1
SIO_010081: VHL
subclass of: SO_0000673
so part of: VHL
location: complement(join(531410..533387,533751..533861,534257..534472))
location: region:531410-534472:-1
so has part: feature:534257-534472:-1:exon
so has part: feature:533751-533861:-1:exon
so has part: feature:531410-533387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534257-534472:-1:exon

position:534257:-1
position: 534257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533751-533861:-1:exon

position:533751:-1
position: 533751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533861:-1
position: 533861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531410-533387:-1:exon

position:533387:-1
position: 533387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VHL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: VHL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Hippel-Lindau disease tumor suppressor
translation: MSPPGPGRPGGAGPVLRSVNTRELSEVVFNNHSPRCVLPVWLDFEGRPRCYPVLQPRSGRVMRSYRGHLWLFRDAGTNDGLLVNQQELFVAAPNVTKADITLPVFTLKERCLQVVRSLVSPVDYRKLDIVQSLYEELEDHPDIWKDLRRLSLERNEALRN
SIO_010081: VHL
subclass of: SO_0000673
so part of: VHL
location: complement(join(533215..533387,533751..533861,534257..534455))
location: region:533215-534455:-1
so has part: feature:534257-534455:-1:exon
so has part: feature:533751-533861:-1:exon
so has part: feature:533215-533387:-1:exon

XP_053810014.1
type: Protein
SIO_000068: ncbiprotein

position:533215:-1
position: 533215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534455:-1
position: 534455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534257-534455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533751-533861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533215-533387:-1:exon

THUMPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: THUMPD3
note: THUMP domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(534969..541616)
location: region:534969-541616:-1
so has part: feature:534969-541616:-1:exon
subclass of: SO_0000010

128794297
type: Gene
SIO_000068: ncbigene

position:534969:-1
position: 534969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541616:-1
position: 541616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534969-541616:-1:exon

THUMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: THUMPD3
product: THUMP domain containing 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954049.1
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(534969..536065,536298..536421,536639..536746,536935..537050,537434..537503,537925..538055,538918..539457,539962..540039,540430..541616))
location: region:534969-541616:-1
so has part: feature:540430-541616:-1:exon
so has part: feature:539962-540039:-1:exon
so has part: feature:538918-539457:-1:exon
so has part: feature:537925-538055:-1:exon
so has part: feature:537434-537503:-1:exon
so has part: feature:536935-537050:-1:exon
so has part: feature:536639-536746:-1:exon
so has part: feature:536298-536421:-1:exon
so has part: feature:534969-536065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540430-541616:-1:exon

position:540430:-1
position: 540430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539962-540039:-1:exon

position:539962:-1
position: 539962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540039:-1
position: 540039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538918-539457:-1:exon

position:538918:-1
position: 538918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539457:-1
position: 539457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537925-538055:-1:exon

position:537925:-1
position: 537925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538055:-1
position: 538055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537434-537503:-1:exon

position:537434:-1
position: 537434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537503:-1
position: 537503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:536935-537050:-1:exon

position:536935:-1
position: 536935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537050:-1
position: 537050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:536639-536746:-1:exon

position:536639:-1
position: 536639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536746:-1
position: 536746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536298-536421:-1:exon

position:536298:-1
position: 536298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536421:-1
position: 536421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:534969-536065:-1:exon

position:536065:-1
position: 536065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THUMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: THUMPD3
product: THUMP domain containing 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954048.1
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(534969..536065,536298..536421,536639..536749,536935..537050,537434..537503,537925..538055,538918..539457,539962..540039,540430..540729))
location: region:534969-540729:-1
so has part: feature:540430-540729:-1:exon
so has part: feature:539962-540039:-1:exon
so has part: feature:538918-539457:-1:exon
so has part: feature:537925-538055:-1:exon
so has part: feature:537434-537503:-1:exon
so has part: feature:536935-537050:-1:exon
so has part: feature:536639-536749:-1:exon
so has part: feature:536298-536421:-1:exon
so has part: feature:534969-536065:-1:exon

position:540729:-1
position: 540729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540430-540729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539962-540039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538918-539457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537925-538055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537434-537503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536935-537050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536639-536749:-1:exon

position:536749:-1
position: 536749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536298-536421:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534969-536065:-1:exon

THUMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: THUMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(6)-N2)-methyltransferase THUMP3 isoform X2
translation: MAEAEAAGDAGPGPGAAQEGAELAAVIGATVPTGFEQTAAEEVQEKLGSASRISRDRGKIYFEVPARSLPQVHRLRSVDNLFVVVQEFKDYQFKENKEDALKDLEDLVKKLPWTDPLKVWELNNSLKKRKTKRKKHNLQSPASRGKLSDGGEEGGADQHSTSDQEDCVQNPVAVEPTGGQDAENPQGVASRNGVEEEEEDNEQSDVKVEEQMSSESGTKAGDGQTGEGEAKVLRFRVTCNRAGDKHSFTSNEAARDFGGAVQEHFHWKADMTNFDVEVLLNIHNNEVVVGIALTEESLHRRNITHFGPTTLRSTLAYGMLRLCDPQPTDIIVDPMCGTGAIPIEGAAEWPYCYHIAGDNSPQAVKRAANNISSLLRKNESKDSAALGVPLDVIQWDICNLPLRTGSVDIVVTDMPFGKRIGSKKKNWDLYPACLMEMGRICTPGTGRAVLLTQDKKCFAKALSRVGHIWRRAQTVWVNVGGLHAAVYLLRRTWESPDETRACW
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(535934..536065,536298..536421,536639..536746,536935..537050,537434..537503,537925..538055,538918..539457,539962..540039,540430..540642))
location: region:535934-540642:-1
so has part: feature:540430-540642:-1:exon
so has part: feature:539962-540039:-1:exon
so has part: feature:538918-539457:-1:exon
so has part: feature:537925-538055:-1:exon
so has part: feature:537434-537503:-1:exon
so has part: feature:536935-537050:-1:exon
so has part: feature:536639-536746:-1:exon
so has part: feature:536298-536421:-1:exon
so has part: feature:535934-536065:-1:exon

XP_053810024.1
type: Protein
SIO_000068: ncbiprotein

position:535934:-1
position: 535934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540642:-1
position: 540642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540430-540642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539962-540039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538918-539457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537925-538055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537434-537503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536935-537050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536639-536746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536298-536421:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535934-536065:-1:exon

THUMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: THUMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(6)-N2)-methyltransferase THUMP3 isoform X1
translation: MAEAEAAGDAGPGPGAAQEGAELAAVIGATVPTGFEQTAAEEVQEKLGSASRISRDRGKIYFEVPARSLPQVHRLRSVDNLFVVVQEFKDYQFKENKEDALKDLEDLVKKLPWTDPLKVWELNNSLKKRKTKRKKHNLQSPASRGKLSDGGEEGGADQHSTSDQEDCVQNPVAVEPTGGQDAENPQGVASRNGVEEEEEDNEQSDVKVEEQMSSESGTKAGDGQTGEGEAKVLRFRVTCNRAGDKHSFTSNEAARDFGGAVQEHFHWKADMTNFDVEVLLNIHNNEVVVGIALTEESLHRRNITHFGPTTLRSTLAYGMLRLCDPQPTDIIVDPMCGTGAIPIEGAAEWPYCYHIAGDNSPQAVKRAANNISSLLRKNESKDSSAALGVPLDVIQWDICNLPLRTGSVDIVVTDMPFGKRIGSKKKNWDLYPACLMEMGRICTPGTGRAVLLTQDKKCFAKALSRVGHIWRRAQTVWVNVGGLHAAVYLLRRTWESPDETRACW
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(535934..536065,536298..536421,536639..536749,536935..537050,537434..537503,537925..538055,538918..539457,539962..540039,540430..540642))
location: region:535934-540642:-1
so has part: feature:540430-540642:-1:exon
so has part: feature:539962-540039:-1:exon
so has part: feature:538918-539457:-1:exon
so has part: feature:537925-538055:-1:exon
so has part: feature:537434-537503:-1:exon
so has part: feature:536935-537050:-1:exon
so has part: feature:536639-536749:-1:exon
so has part: feature:536298-536421:-1:exon
so has part: feature:535934-536065:-1:exon

XP_053810023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540430-540642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539962-540039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538918-539457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537925-538055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537434-537503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536935-537050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536639-536749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536298-536421:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535934-536065:-1:exon

SRGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: SRGAP3
note: SLIT-ROBO Rho GTPase activating protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 558797..632196
location: region:558797-632196:1
so has part: feature:558797-632196:1:exon
subclass of: SO_0000010

128794022
type: Gene
SIO_000068: ncbigene

position:558797:1
position: 558797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632196:1
position: 632196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558797-632196:1:exon

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953580.1
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(558797..558924,591051..591243,594509..594671,600311..600373,604529..604714,606135..606263,611303..611524,611945..612046,612270..612467,613728..613812,614323..614350,617627..617657,618296..618356,618731..618808,619818..619952,622294..622399,623300..623527,624459..624538,626697..626877,627425..627574,628011..628338,629350..632196)
location: region:558797-632196:1
so has part: feature:558797-558924:1:exon
so has part: feature:591051-591243:1:exon
so has part: feature:594509-594671:1:exon
so has part: feature:600311-600373:1:exon
so has part: feature:604529-604714:1:exon
so has part: feature:606135-606263:1:exon
so has part: feature:611303-611524:1:exon
so has part: feature:611945-612046:1:exon
so has part: feature:612270-612467:1:exon
so has part: feature:613728-613812:1:exon
so has part: feature:614323-614350:1:exon
so has part: feature:617627-617657:1:exon
so has part: feature:618296-618356:1:exon
so has part: feature:618731-618808:1:exon
so has part: feature:619818-619952:1:exon
so has part: feature:622294-622399:1:exon
so has part: feature:623300-623527:1:exon
so has part: feature:624459-624538:1:exon
so has part: feature:626697-626877:1:exon
so has part: feature:627425-627574:1:exon
so has part: feature:628011-628338:1:exon
so has part: feature:629350-632196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558797-558924:1:exon

position:558924:1
position: 558924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591051-591243:1:exon

position:591051:1
position: 591051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591243:1
position: 591243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594509-594671:1:exon

position:594509:1
position: 594509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594671:1
position: 594671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:600311-600373:1:exon

position:600311:1
position: 600311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600373:1
position: 600373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604529-604714:1:exon

position:604529:1
position: 604529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604714:1
position: 604714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:606135-606263:1:exon

position:606135:1
position: 606135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606263:1
position: 606263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:611303-611524:1:exon

position:611303:1
position: 611303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611524:1
position: 611524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:611945-612046:1:exon

position:611945:1
position: 611945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612046:1
position: 612046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:612270-612467:1:exon

position:612270:1
position: 612270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612467:1
position: 612467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:613728-613812:1:exon

position:613728:1
position: 613728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613812:1
position: 613812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:614323-614350:1:exon

position:614323:1
position: 614323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614350:1
position: 614350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:617627-617657:1:exon

position:617627:1
position: 617627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617657:1
position: 617657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:618296-618356:1:exon

position:618296:1
position: 618296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618356:1
position: 618356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:618731-618808:1:exon

position:618731:1
position: 618731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618808:1
position: 618808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:619818-619952:1:exon

position:619818:1
position: 619818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619952:1
position: 619952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:622294-622399:1:exon

position:622294:1
position: 622294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622399:1
position: 622399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:623300-623527:1:exon

position:623300:1
position: 623300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623527:1
position: 623527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:624459-624538:1:exon

position:624459:1
position: 624459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624538:1
position: 624538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:626697-626877:1:exon

position:626697:1
position: 626697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626877:1
position: 626877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:627425-627574:1:exon

position:627425:1
position: 627425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627574:1
position: 627574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:628011-628338:1:exon

position:628011:1
position: 628011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628338:1
position: 628338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:629350-632196:1:exon

position:629350:1
position: 629350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_053953581.1
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(558797..558924,591051..591243,594509..594671,600311..600373,604529..604714,606135..606263,611303..611524,611945..612046,612270..612467,613728..613812,614323..614350,616223..616325,618296..618356,618731..618808,619818..619952,622294..622399,623300..623527,624459..624538,626697..626877,627425..627578)
location: region:558797-627578:1
so has part: feature:558797-558924:1:exon
so has part: feature:591051-591243:1:exon
so has part: feature:594509-594671:1:exon
so has part: feature:600311-600373:1:exon
so has part: feature:604529-604714:1:exon
so has part: feature:606135-606263:1:exon
so has part: feature:611303-611524:1:exon
so has part: feature:611945-612046:1:exon
so has part: feature:612270-612467:1:exon
so has part: feature:613728-613812:1:exon
so has part: feature:614323-614350:1:exon
so has part: feature:616223-616325:1:exon
so has part: feature:618296-618356:1:exon
so has part: feature:618731-618808:1:exon
so has part: feature:619818-619952:1:exon
so has part: feature:622294-622399:1:exon
so has part: feature:623300-623527:1:exon
so has part: feature:624459-624538:1:exon
so has part: feature:626697-626877:1:exon
so has part: feature:627425-627578:1:exon

position:627578:1
position: 627578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558797-558924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591051-591243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594509-594671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600311-600373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604529-604714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606135-606263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611303-611524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611945-612046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612270-612467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613728-613812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614323-614350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616223-616325:1:exon

position:616223:1
position: 616223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616325:1
position: 616325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:618296-618356:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:618731-618808:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619818-619952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622294-622399:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:623300-623527:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624459-624538:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:626697-626877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:627425-627578:1:exon

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953579.1
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(558799..558924,591051..591243,594509..594671,600311..600373,604529..604714,606135..606263,611303..611524,611945..612046,612270..612467,613728..613812,614323..614350,616223..616325,618296..618356,618731..618808,619818..619952,622294..622399,623300..623527,624459..624538,626697..626877,627425..627574,628011..628338,629350..632196)
location: region:558799-632196:1
so has part: feature:558799-558924:1:exon
so has part: feature:591051-591243:1:exon
so has part: feature:594509-594671:1:exon
so has part: feature:600311-600373:1:exon
so has part: feature:604529-604714:1:exon
so has part: feature:606135-606263:1:exon
so has part: feature:611303-611524:1:exon
so has part: feature:611945-612046:1:exon
so has part: feature:612270-612467:1:exon
so has part: feature:613728-613812:1:exon
so has part: feature:614323-614350:1:exon
so has part: feature:616223-616325:1:exon
so has part: feature:618296-618356:1:exon
so has part: feature:618731-618808:1:exon
so has part: feature:619818-619952:1:exon
so has part: feature:622294-622399:1:exon
so has part: feature:623300-623527:1:exon
so has part: feature:624459-624538:1:exon
so has part: feature:626697-626877:1:exon
so has part: feature:627425-627574:1:exon
so has part: feature:628011-628338:1:exon
so has part: feature:629350-632196:1:exon

position:558799:1
position: 558799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558799-558924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591051-591243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594509-594671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600311-600373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604529-604714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606135-606263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611303-611524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611945-612046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612270-612467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613728-613812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614323-614350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616223-616325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:618296-618356:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:618731-618808:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619818-619952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622294-622399:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:623300-623527:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624459-624538:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:626697-626877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:627425-627574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628011-628338:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:629350-632196:1:exon

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
translation: MSAQGKFKKDKEIIADYEAQVKEIRTQLVEQFKCLEQQSESRLQLLQDLQEFFRRKAEIELEYSRSLEKLAERFSSKIRSSREHQFKKDQHLLSPVNCWYLVLTQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTVMKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDISVNLLRHEDRPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAAVSKYYIHDVSDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDIIENAVDNLDARSDKHTIMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYLNGSNLITKLQAKHDLLKQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVYNHKLFNGNMETFIKDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLADDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISTIKIENPAERVHQIQQIIVTLPRAVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNEVIKTIIIHHEGIFPSHRELEGPVYEKCMTGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDDEVEQIEAIAKFDYIGRSPRELSFKKGASLLLYHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDIQSPTDHIMDYGFGGVMGRVRLRSDGAAIPRRRSGGDTHSPPRGMGPGLDTPPRAAACPSSPHKIPLNRGRIESPEKRRMATFGSAGSINFPDRKALADSHPLRSTCGSTRHSSLGDQKSLEAEALAEDIEKTMSTALNELRELERQNTAKQAPDVVLDTLEPMKNPPLGAANSEPASPLHTILIRDPDAAMRRSSSSTTEMMTTFKPALSARLAGAQLRPPPMRPVRPVVQHRSSSSSSSGVGSPAVTPTEKLFPSSSADKSGTM
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(558858..558924,591051..591243,594509..594671,600311..600373,604529..604714,606135..606263,611303..611524,611945..612046,612270..612467,613728..613812,614323..614350,616223..616325,618296..618356,618731..618808,619818..619952,622294..622399,623300..623527,624459..624538,626697..626877,627425..627574,628011..628338,629350..629766)
location: region:558858-629766:1
so has part: feature:558858-558924:1:exon
so has part: feature:591051-591243:1:exon
so has part: feature:594509-594671:1:exon
so has part: feature:600311-600373:1:exon
so has part: feature:604529-604714:1:exon
so has part: feature:606135-606263:1:exon
so has part: feature:611303-611524:1:exon
so has part: feature:611945-612046:1:exon
so has part: feature:612270-612467:1:exon
so has part: feature:613728-613812:1:exon
so has part: feature:614323-614350:1:exon
so has part: feature:616223-616325:1:exon
so has part: feature:618296-618356:1:exon
so has part: feature:618731-618808:1:exon
so has part: feature:619818-619952:1:exon
so has part: feature:622294-622399:1:exon
so has part: feature:623300-623527:1:exon
so has part: feature:624459-624538:1:exon
so has part: feature:626697-626877:1:exon
so has part: feature:627425-627574:1:exon
so has part: feature:628011-628338:1:exon
so has part: feature:629350-629766:1:exon

XP_053809554.1
type: Protein
SIO_000068: ncbiprotein

position:558858:1
position: 558858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629766:1
position: 629766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558858-558924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591051-591243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594509-594671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600311-600373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604529-604714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606135-606263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611303-611524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611945-612046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612270-612467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613728-613812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614323-614350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616223-616325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:618296-618356:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:618731-618808:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619818-619952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622294-622399:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:623300-623527:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624459-624538:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:626697-626877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:627425-627574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628011-628338:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:629350-629766:1:exon

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3 isoform X2
translation: MSAQGKFKKDKEIIADYEAQVKEIRTQLVEQFKCLEQQSESRLQLLQDLQEFFRRKAEIELEYSRSLEKLAERFSSKIRSSREHQFKKDQHLLSPVNCWYLVLTQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTVMKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDISVNLLRHEDRPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAAVSKYYIHDVSDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDIIENAVDNLDARSDKHTIMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYLNGSNLITKLQAKHDLLKQTLGEGERAECGTTRGRRNARTRNQDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLADDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISTIKIENPAERVHQIQQIIVTLPRAVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNEVIKTIIIHHEGIFPSHRELEGPVYEKCMTGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDDEVEQIEAIAKFDYIGRSPRELSFKKGASLLLYHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDIQSPTDHIMDYGFGGVMGRVRLRSDGAAIPRRRSGGDTHSPPRGMGPGLDTPPRAAACPSSPHKIPLNRGRIESPEKRRMATFGSAGSINFPDRKALADSHPLRSTCGSTRHSSLGDQKSLEAEALAEDIEKTMSTALNELRELERQNTAKQAPDVVLDTLEPMKNPPLGAANSEPASPLHTILIRDPDAAMRRSSSSTTEMMTTFKPALSARLAGAQLRPPPMRPVRPVVQHRSSSSSSSGVGSPAVTPTEKLFPSSSADKSGTM
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(558858..558924,591051..591243,594509..594671,600311..600373,604529..604714,606135..606263,611303..611524,611945..612046,612270..612467,613728..613812,614323..614350,617627..617657,618296..618356,618731..618808,619818..619952,622294..622399,623300..623527,624459..624538,626697..626877,627425..627574,628011..628338,629350..629766)
location: region:558858-629766:1
so has part: feature:558858-558924:1:exon
so has part: feature:591051-591243:1:exon
so has part: feature:594509-594671:1:exon
so has part: feature:600311-600373:1:exon
so has part: feature:604529-604714:1:exon
so has part: feature:606135-606263:1:exon
so has part: feature:611303-611524:1:exon
so has part: feature:611945-612046:1:exon
so has part: feature:612270-612467:1:exon
so has part: feature:613728-613812:1:exon
so has part: feature:614323-614350:1:exon
so has part: feature:617627-617657:1:exon
so has part: feature:618296-618356:1:exon
so has part: feature:618731-618808:1:exon
so has part: feature:619818-619952:1:exon
so has part: feature:622294-622399:1:exon
so has part: feature:623300-623527:1:exon
so has part: feature:624459-624538:1:exon
so has part: feature:626697-626877:1:exon
so has part: feature:627425-627574:1:exon
so has part: feature:628011-628338:1:exon
so has part: feature:629350-629766:1:exon

XP_053809555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558858-558924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591051-591243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594509-594671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600311-600373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604529-604714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606135-606263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611303-611524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611945-612046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612270-612467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613728-613812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614323-614350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617627-617657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:618296-618356:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:618731-618808:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619818-619952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622294-622399:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:623300-623527:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624459-624538:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:626697-626877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:627425-627574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628011-628338:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:629350-629766:1:exon

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3 isoform X3
translation: MSAQGKFKKDKEIIADYEAQVKEIRTQLVEQFKCLEQQSESRLQLLQDLQEFFRRKAEIELEYSRSLEKLAERFSSKIRSSREHQFKKDQHLLSPVNCWYLVLTQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLKVTNELYTVMKTYHMYHAESISAESKLKEAEKQEEKQFNKSGDISVNLLRHEDRPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAAVSKYYIHDVSDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDIIENAVDNLDARSDKHTIMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKINIAKRRANQQETEMFYFTKFKEYLNGSNLITKLQAKHDLLKQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVYNHKLFNGNMETFIKDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLADDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISTIKIENPAERVHQIQQIIVTLPRAVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNEVIKTIIIHHEGIFPSHRELEGPVYEKCMTGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDDEVEQIEAIAKFDYIGRSPRELSFKKGASLLLYHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDIQSPTDHIMDYGFGGVMGR
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(558858..558924,591051..591243,594509..594671,600311..600373,604529..604714,606135..606263,611303..611524,611945..612046,612270..612467,613728..613812,614323..614350,616223..616325,618296..618356,618731..618808,619818..619952,622294..622399,623300..623527,624459..624538,626697..626877,627425..627578)
location: region:558858-627578:1
so has part: feature:558858-558924:1:exon
so has part: feature:591051-591243:1:exon
so has part: feature:594509-594671:1:exon
so has part: feature:600311-600373:1:exon
so has part: feature:604529-604714:1:exon
so has part: feature:606135-606263:1:exon
so has part: feature:611303-611524:1:exon
so has part: feature:611945-612046:1:exon
so has part: feature:612270-612467:1:exon
so has part: feature:613728-613812:1:exon
so has part: feature:614323-614350:1:exon
so has part: feature:616223-616325:1:exon
so has part: feature:618296-618356:1:exon
so has part: feature:618731-618808:1:exon
so has part: feature:619818-619952:1:exon
so has part: feature:622294-622399:1:exon
so has part: feature:623300-623527:1:exon
so has part: feature:624459-624538:1:exon
so has part: feature:626697-626877:1:exon
so has part: feature:627425-627578:1:exon

XP_053809556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558858-558924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591051-591243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594509-594671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600311-600373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604529-604714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606135-606263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611303-611524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611945-612046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612270-612467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613728-613812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614323-614350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616223-616325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:618296-618356:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:618731-618808:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619818-619952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622294-622399:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:623300-623527:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624459-624538:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:626697-626877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:627425-627578:1:exon

LOC128794121
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794121
note: uncharacterized LOC128794121; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(644729..646281)
location: region:644729-646281:-1
so has part: feature:644729-646281:-1:exon
subclass of: SO_0000011

128794121
type: Gene
SIO_000068: ncbigene

position:644729:-1
position: 644729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646281:-1
position: 646281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644729-646281:-1:exon

LOC128794121
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794121
product: uncharacterized LOC128794121
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008432996.1
SIO_010081: LOC128794121
subclass of: SO_0000673
so part of: LOC128794121
location: complement(join(644729..646126,646235..646281))
location: region:644729-646281:-1
so has part: feature:646235-646281:-1:exon
so has part: feature:644729-646126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646235-646281:-1:exon

position:646235:-1
position: 646235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:644729-646126:-1:exon

position:646126:-1
position: 646126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAD18
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: RAD18
note: RAD18 E3 ubiquitin protein ligase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <647372..676637
location: region:647372-676637:1
so has part: feature:647372-676637:1:exon
subclass of: SO_0000010

128794287
type: Gene
SIO_000068: ncbigene

position:647372:1
position: 647372
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:676637:1
position: 676637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647372-676637:1:exon

RAD18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: RAD18
product: RAD18 E3 ubiquitin protein ligase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954035.1
SIO_010081: RAD18
subclass of: SO_0000673
so part of: RAD18
location: join(<647372..647476,647548..647597,647679..647727,647799..647838,647991..648049,648141..648398,648511..648592,650565..650626,651584..651654,655337..655683,656894..656993,659277..659461,660548..660624,661282..661342,663621..663755,666863..667019,674760..674822,676442..676637)
location: region:647372-676637:1
so has part: feature:647372-647476:1:exon
so has part: feature:647548-647597:1:exon
so has part: feature:647679-647727:1:exon
so has part: feature:647799-647838:1:exon
so has part: feature:647991-648049:1:exon
so has part: feature:648141-648398:1:exon
so has part: feature:648511-648592:1:exon
so has part: feature:650565-650626:1:exon
so has part: feature:651584-651654:1:exon
so has part: feature:655337-655683:1:exon
so has part: feature:656894-656993:1:exon
so has part: feature:659277-659461:1:exon
so has part: feature:660548-660624:1:exon
so has part: feature:661282-661342:1:exon
so has part: feature:663621-663755:1:exon
so has part: feature:666863-667019:1:exon
so has part: feature:674760-674822:1:exon
so has part: feature:676442-676637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647372-647476:1:exon

position:647476:1
position: 647476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:647548-647597:1:exon

position:647548:1
position: 647548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647597:1
position: 647597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647679-647727:1:exon

position:647679:1
position: 647679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647727:1
position: 647727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647799-647838:1:exon

position:647799:1
position: 647799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647838:1
position: 647838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647991-648049:1:exon

position:647991:1
position: 647991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648049:1
position: 648049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:648141-648398:1:exon

position:648141:1
position: 648141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648398:1
position: 648398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:648511-648592:1:exon

position:648511:1
position: 648511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648592:1
position: 648592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:650565-650626:1:exon

position:650565:1
position: 650565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650626:1
position: 650626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:651584-651654:1:exon

position:651584:1
position: 651584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651654:1
position: 651654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:655337-655683:1:exon

position:655337:1
position: 655337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655683:1
position: 655683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:656894-656993:1:exon

position:656894:1
position: 656894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656993:1
position: 656993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:659277-659461:1:exon

position:659277:1
position: 659277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659461:1
position: 659461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:660548-660624:1:exon

position:660548:1
position: 660548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660624:1
position: 660624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:661282-661342:1:exon

position:661282:1
position: 661282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661342:1
position: 661342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:663621-663755:1:exon

position:663621:1
position: 663621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663755:1
position: 663755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:666863-667019:1:exon

position:666863:1
position: 666863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667019:1
position: 667019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:674760-674822:1:exon

position:674760:1
position: 674760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674822:1
position: 674822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:676442-676637:1:exon

position:676442:1
position: 676442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAD18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: RAD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RAD18
translation: RSPRCRCRWFPLVPVGSRSSRWFPFPVPRCRWFPLFPLVPVVPVAAAVGSRCSRWFPFPVPRCRWFPLFPLVPVVPVAAAVVPVGSRWFPFPVPRCRWFPLFPLVPVVPVGSRSPRCRSRSSRSPFPAAVGRRRCRKRCRKLAVRADPGPPPLPAGPWGGTGPGRADSAVAMPLLEPPWPPGLAPLKAVDDLLRCGICFDYFSIAVIIPQCSHSYCSLCIRKSLSYKTQCPTCCVAVSESDLKNNRILDDLVKSFNSARQQLLQLVLEAPPVPSPPAHSQRPAAESHWSPVSQPESKEVPGIESSLRKDKVCTSTKAGGLAWTAQKSFKTEEHHEHSTSAELGGKDSKVRSQEIPGCTESHERPSTSVLKGDKKVECPVCEVAILEQYINKHLDSCLTREEKKDSLRSSDHKRKLMSKVVYNLLSDRDLRKKLKEQGLSASGTRQQLIKRHQEFVHMYNAQCDSLNPKSVAEIVKELEKNEKIRVQLECNKPGENSLTFTKDQTEEEIDEIHAEYRNKHRSEFKFLVDQVNKRWKKIGERKAESAQNKEEVAAKELPAATEPAEEDHTAVVPGKAQALQPEIPDGQRSDSPSLKEWQRSASPEFSLSSGSTCSTNSDILADTEESETCSASSDSSSSVALAGSKRKLGRPRIPESSGARPLGKRKRS
SIO_010081: RAD18
subclass of: SO_0000673
so part of: RAD18
location: join(<647372..647476,647548..647597,647679..647727,647799..647838,647991..648049,648141..648398,648511..648592,650565..650626,651584..651654,655337..655683,656894..656993,659277..659461,660548..660624,661282..661342,663621..663755,666863..667019,674760..674822,676442..676544)
location: region:647372-676544:1
so has part: feature:647372-647476:1:exon
so has part: feature:647548-647597:1:exon
so has part: feature:647679-647727:1:exon
so has part: feature:647799-647838:1:exon
so has part: feature:647991-648049:1:exon
so has part: feature:648141-648398:1:exon
so has part: feature:648511-648592:1:exon
so has part: feature:650565-650626:1:exon
so has part: feature:651584-651654:1:exon
so has part: feature:655337-655683:1:exon
so has part: feature:656894-656993:1:exon
so has part: feature:659277-659461:1:exon
so has part: feature:660548-660624:1:exon
so has part: feature:661282-661342:1:exon
so has part: feature:663621-663755:1:exon
so has part: feature:666863-667019:1:exon
so has part: feature:674760-674822:1:exon
so has part: feature:676442-676544:1:exon

XP_053810010.1
type: Protein
SIO_000068: ncbiprotein

position:676544:1
position: 676544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647372-647476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647548-647597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647679-647727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647799-647838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647991-648049:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:648141-648398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:648511-648592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:650565-650626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:651584-651654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655337-655683:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:656894-656993:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:659277-659461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660548-660624:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:661282-661342:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:663621-663755:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:666863-667019:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:674760-674822:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:676442-676544:1:exon

LOC128794288
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794288
note: proline-rich protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(684666..685574)
location: region:684666-685574:-1
so has part: feature:684666-685574:-1:exon
subclass of: SO_0000010

128794288
type: Gene
SIO_000068: ncbigene

position:684666:-1
position: 684666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685574:-1
position: 685574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684666-685574:-1:exon

LOC128794288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794288
product: proline-rich protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_053954036.1
SIO_010081: LOC128794288
subclass of: SO_0000673
so part of: LOC128794288
location: complement(684666..685574)
location: region:684666-685574:-1
so has part: feature:684666-685574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684666-685574:-1:exon

LOC128794288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 2-like
translation: MRSRAVAGCPRRSLSVSPRFSISHGSPALRPPPFPSPPRRSLCPPVPVPVPRAAAPRGSSLSPRRSLGVSAGAAPPPAPAQGPGERRGRRAEAGPGPAPRGPPAASGPAPGPASASSPRPPRGAAVRAPQRQPRFPAPLSSRAAPVPRSPVLRSPAPLGSSSSLQPLSGSPALPGSPGSPQPRFPAPRFPAPRIPAAPLLSGSPGSPQPRFPAAPLLSGSPGSPERGREGERRSEAAVMGGGRQRPRQPKTPGTAGLGTQRRVGARTGLTPSAALPCRSCRRRTPREGPPVDASPASSEEQA
SIO_010081: LOC128794288
subclass of: SO_0000673
so part of: LOC128794288
location: complement(684666..685574)
location: region:684666-685574:-1
so has part: feature:684666-685574:-1:exon

XP_053810011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:684666-685574:-1:exon

OXTR
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: OXTR
note: oxytocin receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 685528..690605
location: region:685528-690605:1
so has part: feature:685528-690605:1:exon
subclass of: SO_0000010

128794108
type: Gene
SIO_000068: ncbigene

position:685528:1
position: 685528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690605:1
position: 690605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685528-690605:1:exon

OXTR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: OXTR
product: oxytocin receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_053953750.1
SIO_010081: OXTR
subclass of: SO_0000673
so part of: OXTR
location: join(685528..686582,690364..690605)
location: region:685528-690605:1
so has part: feature:685528-686582:1:exon
so has part: feature:690364-690605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685528-686582:1:exon

position:686582:1
position: 686582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690364-690605:1:exon

position:690364:1
position: 690364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OXTR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: OXTR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxytocin receptor
translation: MEKLYLAGSSTWIINSSLGNGSLRLENLSAGRNSTADPLKRNEDMAKVEVTVLCLILFLALTGNLCVLLAIHTTRHKHSRMYFFMKHLSIADLVVAIFQVLPQLIWDITFRFYGPDFLCRLIKYLQVVGMFASTYMLLLMSLDRCLAICQPLRSLHRRADRVSVLLTWLLCLLVSIPQIHIFSLRDVGNGVYDCWADFIQPWGPKAYVTWITLMVYIIPVLMLSICYGLISFKIWQNVKLKTTHGPSVGLGSGSRGGMVFARVSSTRLISKAKIRTVKMTFIIVLAFIVCWTPFFFVQMWSVWDTNAPQEASPFIIAMLLASLNSCCNPWIYMLYTGHLFHDLMRRLLCCSARCLKSRPACELSKKSNSSSFVLSCRGTSQRSFMQPSTT
SIO_010081: OXTR
subclass of: SO_0000673
so part of: OXTR
location: join(685652..686582,690364..690605)
location: region:685652-690605:1
so has part: feature:685652-686582:1:exon
so has part: feature:690364-690605:1:exon

XP_053809725.1
type: Protein
SIO_000068: ncbiprotein

position:685652:1
position: 685652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685652-686582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690364-690605:1:exon

CAV3
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: CAV3
note: caveolin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(695548..698950)
location: region:695548-698950:-1
so has part: feature:695548-698950:-1:exon
subclass of: SO_0000010

128794209
type: Gene
SIO_000068: ncbigene

position:695548:-1
position: 695548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698950:-1
position: 698950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695548-698950:-1:exon

CAV3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CAV3
product: caveolin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_053953914.1
SIO_010081: CAV3
subclass of: SO_0000673
so part of: CAV3
location: complement(join(695548..696085,698837..698950))
location: region:695548-698950:-1
so has part: feature:698837-698950:-1:exon
so has part: feature:695548-696085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698837-698950:-1:exon

position:698837:-1
position: 698837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:695548-696085:-1:exon

position:696085:-1
position: 696085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAV3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CAV3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caveolin-3
translation: MAEEHSELEERIIIKDQHTKEIDLVNRDPKHINEDVVKVDFEDVIAEPLGTYSFDGVWKTSYTTFTVSKYWCYRLLSAILGIPLAVIWGFLFALISFCHIWAVVPCIKSYLIEIQCVSRIYSLCIHTFCDPLFEALAKICSNIRVAVRKEI
SIO_010081: CAV3
subclass of: SO_0000673
so part of: CAV3
location: complement(join(695744..696085,698837..698950))
location: region:695744-698950:-1
so has part: feature:698837-698950:-1:exon
so has part: feature:695744-696085:-1:exon

XP_053809889.1
type: Protein
SIO_000068: ncbiprotein

position:695744:-1
position: 695744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698837-698950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695744-696085:-1:exon

LMCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LMCD1
note: LIM and cysteine rich domains 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(729497..753672)
location: region:729497-753672:-1
so has part: feature:729497-753672:-1:exon
subclass of: SO_0000010

128794354
type: Gene
SIO_000068: ncbigene

position:729497:-1
position: 729497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753672:-1
position: 753672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729497-753672:-1:exon

LMCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LMCD1
product: LIM and cysteine rich domains 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_053954136.1
SIO_010081: LMCD1
subclass of: SO_0000673
so part of: LMCD1
location: complement(join(729497..731166,732269..732484,736006..736335,740478..740733,741967..742055,753647..753672))
location: region:729497-753672:-1
so has part: feature:753647-753672:-1:exon
so has part: feature:741967-742055:-1:exon
so has part: feature:740478-740733:-1:exon
so has part: feature:736006-736335:-1:exon
so has part: feature:732269-732484:-1:exon
so has part: feature:729497-731166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753647-753672:-1:exon

position:753647:-1
position: 753647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741967-742055:-1:exon

position:741967:-1
position: 741967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742055:-1
position: 742055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:740478-740733:-1:exon

position:740478:-1
position: 740478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740733:-1
position: 740733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:736006-736335:-1:exon

position:736006:-1
position: 736006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736335:-1
position: 736335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:732269-732484:-1:exon

position:732269:-1
position: 732269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732484:-1
position: 732484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:729497-731166:-1:exon

position:731166:-1
position: 731166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LMCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and cysteine-rich domains protein 1
translation: MSGSQPQVGRGVPCLRCRGLCTGFEPHSWRKICKSCKCSQEEHSLSSELDDDHKIGRLLSDSKYATLTARLKGGDGGRIYKRNRMIVTNPNISGKDPTFDTITYEWAPPGLTQKLAMQYMELVPKELQPVAGTDGAFHRRRRLARQLPLHDQDPAQCRGLAEGEQQLMQDFVKKYKAEALGVGEVALPGQGGGGKEEEKPQDKSIDPGRAPESPNGALESAAGHYRCESCQQPVPGDCPVVYADRAGYSRQWHPACFVCCRCAEPLVDLIYFWKSGAAWCGRHYCESLRPRCAGCDEIIFSEDFQQVEGLAWHNKHFACLECETLLTGKPFALANASLLCTTCSQSRV
SIO_010081: LMCD1
subclass of: SO_0000673
so part of: LMCD1
location: complement(join(731011..731166,732269..732484,736006..736335,740478..740733,741967..742055))
location: region:731011-742055:-1
so has part: feature:741967-742055:-1:exon
so has part: feature:740478-740733:-1:exon
so has part: feature:736006-736335:-1:exon
so has part: feature:732269-732484:-1:exon
so has part: feature:731011-731166:-1:exon

XP_053810111.1
type: Protein
SIO_000068: ncbiprotein

position:731011:-1
position: 731011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741967-742055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740478-740733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736006-736335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732269-732484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731011-731166:-1:exon

LOC128794190
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794190
note: uncharacterized LOC128794190; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(818526..819284)
location: region:818526-819284:-1
so has part: feature:818526-819284:-1:exon
subclass of: SO_0000011

128794190
type: Gene
SIO_000068: ncbigene

position:818526:-1
position: 818526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819284:-1
position: 819284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818526-819284:-1:exon

LOC128794190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794190
product: uncharacterized LOC128794190
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433022.1
SIO_010081: LOC128794190
subclass of: SO_0000673
so part of: LOC128794190
location: complement(join(818526..818786,818866..819284))
location: region:818526-819284:-1
so has part: feature:818866-819284:-1:exon
so has part: feature:818526-818786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818866-819284:-1:exon

position:818866:-1
position: 818866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818526-818786:-1:exon

position:818786:-1
position: 818786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794270
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794270
note: uncharacterized LOC128794270; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(872310..872881)
location: region:872310-872881:-1
so has part: feature:872310-872881:-1:exon
subclass of: SO_0000011

128794270
type: Gene
SIO_000068: ncbigene

position:872310:-1
position: 872310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872881:-1
position: 872881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872310-872881:-1:exon

LOC128794270
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794270
product: uncharacterized LOC128794270
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433041.1
SIO_010081: LOC128794270
subclass of: SO_0000673
so part of: LOC128794270
location: complement(join(872310..872509,872637..872881))
location: region:872310-872881:-1
so has part: feature:872637-872881:-1:exon
so has part: feature:872310-872509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:872637-872881:-1:exon

position:872637:-1
position: 872637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:872310-872509:-1:exon

position:872509:-1
position: 872509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRM7
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: GRM7
note: glutamate metabotropic receptor 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(910944..1141241)
location: region:910944-1141241:-1
so has part: feature:910944-1141241:-1:exon
subclass of: SO_0000010

128794268
type: Gene
SIO_000068: ncbigene

position:910944:-1
position: 910944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141241:-1
position: 1141241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910944-1141241:-1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954017.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(910944..912357,931333..931579,956530..957465,977183..977322,982530..982730,988544..988684,1008560..1008714,1009603..1009744,1055248..1055464,1140640..1141241))
location: region:910944-1141241:-1
so has part: feature:1140640-1141241:-1:exon
so has part: feature:1055248-1055464:-1:exon
so has part: feature:1009603-1009744:-1:exon
so has part: feature:1008560-1008714:-1:exon
so has part: feature:988544-988684:-1:exon
so has part: feature:982530-982730:-1:exon
so has part: feature:977183-977322:-1:exon
so has part: feature:956530-957465:-1:exon
so has part: feature:931333-931579:-1:exon
so has part: feature:910944-912357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140640-1141241:-1:exon

position:1140640:-1
position: 1140640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1055248-1055464:-1:exon

position:1055248:-1
position: 1055248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055464:-1
position: 1055464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1009603-1009744:-1:exon

position:1009603:-1
position: 1009603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009744:-1
position: 1009744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1008560-1008714:-1:exon

position:1008560:-1
position: 1008560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008714:-1
position: 1008714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:988544-988684:-1:exon

position:988544:-1
position: 988544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988684:-1
position: 988684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:982530-982730:-1:exon

position:982530:-1
position: 982530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982730:-1
position: 982730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:977183-977322:-1:exon

position:977183:-1
position: 977183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977322:-1
position: 977322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:956530-957465:-1:exon

position:956530:-1
position: 956530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957465:-1
position: 957465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:931333-931579:-1:exon

position:931333:-1
position: 931333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931579:-1
position: 931579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:910944-912357:-1:exon

position:912357:-1
position: 912357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954016.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(910944..912357,926953..927045,931333..931579,956530..957465,977183..977322,982530..982730,988544..988684,1008560..1008714,1009603..1009744,1055248..1055464,1140640..1141241))
location: region:910944-1141241:-1
so has part: feature:1140640-1141241:-1:exon
so has part: feature:1055248-1055464:-1:exon
so has part: feature:1009603-1009744:-1:exon
so has part: feature:1008560-1008714:-1:exon
so has part: feature:988544-988684:-1:exon
so has part: feature:982530-982730:-1:exon
so has part: feature:977183-977322:-1:exon
so has part: feature:956530-957465:-1:exon
so has part: feature:931333-931579:-1:exon
so has part: feature:926953-927045:-1:exon
so has part: feature:910944-912357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140640-1141241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055248-1055464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009603-1009744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1008560-1008714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988544-988684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982530-982730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:977183-977322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956530-957465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931333-931579:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926953-927045:-1:exon

position:926953:-1
position: 926953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927045:-1
position: 927045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:910944-912357:-1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X2
translation: MGRPGRVLRLLALLELPCCLLELLLGEAARGQEMYAPHSIRLEGDITLGGLFPVHAKGPPGSPCGDIKKENGIHRLEAMLYALDQINSDPDLLPNVTLGARILDTCSRDTYALEQSLTFVQALIQKDTSDVRCTNGEPPVFVKPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGNYGEKGVESFMQISREAGGLCIAQSLKIPQDRKDKSIDFDRIIRQLLETPNARAIVIFANDEDIRQILAAAKRADQVGHFLWVGSDTWGSKVSPLLQQEDVAEGAITILPKRATIEGFDTYFTSRTLENNRRNVWFAEYWEENFNCKLTITGSKKEDTDRKCTGQERIGKDSPYEQEGKVQFVIDAVYAMAHALHHMNRDLCADSAGLCPEMEHAGGKRLLKYIRSVNFNGSAGTPVMFNKNGDAPGRYDIFQYHSSNTSTPGYRLVGQWTDDLQLNVEEMQWGGGVRAVPPSVCSQPCRPGERKKMVKGMPCCWHCELCDGYQYQADEVTCLLCSYNERPNENRTGCRSIPIIKLEWHSPWAVIPVFLAMLGIVATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRIFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAITSSLISVQLLGVFIWFAVDPPNIIIDYDEQKTMNPDQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCESVDPSSPAAKKKYVSYNNLVI
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(912308..912357,931333..931579,956530..957465,977183..977322,982530..982730,988544..988684,1008560..1008714,1009603..1009744,1055248..1055464,1140640..1141149))
location: region:912308-1141149:-1
so has part: feature:1140640-1141149:-1:exon
so has part: feature:1055248-1055464:-1:exon
so has part: feature:1009603-1009744:-1:exon
so has part: feature:1008560-1008714:-1:exon
so has part: feature:988544-988684:-1:exon
so has part: feature:982530-982730:-1:exon
so has part: feature:977183-977322:-1:exon
so has part: feature:956530-957465:-1:exon
so has part: feature:931333-931579:-1:exon
so has part: feature:912308-912357:-1:exon

XP_053809992.1
type: Protein
SIO_000068: ncbiprotein

position:912308:-1
position: 912308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141149:-1
position: 1141149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140640-1141149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055248-1055464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009603-1009744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1008560-1008714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988544-988684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982530-982730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:977183-977322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956530-957465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931333-931579:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912308-912357:-1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X1
translation: MGRPGRVLRLLALLELPCCLLELLLGEAARGQEMYAPHSIRLEGDITLGGLFPVHAKGPPGSPCGDIKKENGIHRLEAMLYALDQINSDPDLLPNVTLGARILDTCSRDTYALEQSLTFVQALIQKDTSDVRCTNGEPPVFVKPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGNYGEKGVESFMQISREAGGLCIAQSLKIPQDRKDKSIDFDRIIRQLLETPNARAIVIFANDEDIRQILAAAKRADQVGHFLWVGSDTWGSKVSPLLQQEDVAEGAITILPKRATIEGFDTYFTSRTLENNRRNVWFAEYWEENFNCKLTITGSKKEDTDRKCTGQERIGKDSPYEQEGKVQFVIDAVYAMAHALHHMNRDLCADSAGLCPEMEHAGGKRLLKYIRSVNFNGSAGTPVMFNKNGDAPGRYDIFQYHSSNTSTPGYRLVGQWTDDLQLNVEEMQWGGGVRAVPPSVCSQPCRPGERKKMVKGMPCCWHCELCDGYQYQADEVTCLLCSYNERPNENRTGCRSIPIIKLEWHSPWAVIPVFLAMLGIVATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRIFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAITSSLISVQLLGVFIWFAVDPPNIIIDYDEQKTMNPDQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCESVDPSNSIPPVRKSVQKSVTWYTLPPTV
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(926975..927045,931333..931579,956530..957465,977183..977322,982530..982730,988544..988684,1008560..1008714,1009603..1009744,1055248..1055464,1140640..1141149))
location: region:926975-1141149:-1
so has part: feature:1140640-1141149:-1:exon
so has part: feature:1055248-1055464:-1:exon
so has part: feature:1009603-1009744:-1:exon
so has part: feature:1008560-1008714:-1:exon
so has part: feature:988544-988684:-1:exon
so has part: feature:982530-982730:-1:exon
so has part: feature:977183-977322:-1:exon
so has part: feature:956530-957465:-1:exon
so has part: feature:931333-931579:-1:exon
so has part: feature:926975-927045:-1:exon

XP_053809991.1
type: Protein
SIO_000068: ncbiprotein

position:926975:-1
position: 926975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140640-1141149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055248-1055464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009603-1009744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1008560-1008714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988544-988684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982530-982730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:977183-977322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956530-957465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931333-931579:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926975-927045:-1:exon

LOC128794272
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794272
note: uncharacterized LOC128794272; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1035062..1038809
location: region:1035062-1038809:1
so has part: feature:1035062-1038809:1:exon
subclass of: SO_0000011

128794272
type: Gene
SIO_000068: ncbigene

position:1035062:1
position: 1035062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038809:1
position: 1038809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035062-1038809:1:exon

LOC128794272
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794272
product: uncharacterized LOC128794272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433043.1
SIO_010081: LOC128794272
subclass of: SO_0000673
so part of: LOC128794272
location: join(1035062..1035629,1035732..1035817,1038736..1038809)
location: region:1035062-1038809:1
so has part: feature:1035062-1035629:1:exon
so has part: feature:1035732-1035817:1:exon
so has part: feature:1038736-1038809:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1035062-1035629:1:exon

position:1035629:1
position: 1035629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1035732-1035817:1:exon

position:1035732:1
position: 1035732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035817:1
position: 1035817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1038736-1038809:1:exon

position:1038736:1
position: 1038736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128794271
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794271
note: uncharacterized LOC128794271; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1168217..1172255)
location: region:1168217-1172255:-1
so has part: feature:1168217-1172255:-1:exon
subclass of: SO_0000011

128794271
type: Gene
SIO_000068: ncbigene

position:1168217:-1
position: 1168217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172255:-1
position: 1172255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168217-1172255:-1:exon

LOC128794271
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794271
product: uncharacterized LOC128794271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433042.1
SIO_010081: LOC128794271
subclass of: SO_0000673
so part of: LOC128794271
location: complement(join(1168217..1168286,1169981..1170882,1172173..1172255))
location: region:1168217-1172255:-1
so has part: feature:1172173-1172255:-1:exon
so has part: feature:1169981-1170882:-1:exon
so has part: feature:1168217-1168286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172173-1172255:-1:exon

position:1172173:-1
position: 1172173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1169981-1170882:-1:exon

position:1169981:-1
position: 1169981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170882:-1
position: 1170882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1168217-1168286:-1:exon

position:1168286:-1
position: 1168286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794269
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794269
note: uncharacterized LOC128794269; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1293973..1298060)
location: region:1293973-1298060:-1
so has part: feature:1293973-1298060:-1:exon
subclass of: SO_0000011

128794269
type: Gene
SIO_000068: ncbigene

position:1293973:-1
position: 1293973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298060:-1
position: 1298060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293973-1298060:-1:exon

LOC128794269
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794269
product: uncharacterized LOC128794269, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433038.1
SIO_010081: LOC128794269
subclass of: SO_0000673
so part of: LOC128794269
location: complement(join(1293973..1294627,1295245..1295361,1297780..1298060))
location: region:1293973-1298060:-1
so has part: feature:1297780-1298060:-1:exon
so has part: feature:1295245-1295361:-1:exon
so has part: feature:1293973-1294627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1297780-1298060:-1:exon

position:1297780:-1
position: 1297780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1295245-1295361:-1:exon

position:1295245:-1
position: 1295245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295361:-1
position: 1295361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293973-1294627:-1:exon

position:1294627:-1
position: 1294627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794269
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794269
product: uncharacterized LOC128794269, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433039.1
SIO_010081: LOC128794269
subclass of: SO_0000673
so part of: LOC128794269
location: complement(join(1293973..1294627,1295245..1295361,1297976..1298058))
location: region:1293973-1298058:-1
so has part: feature:1297976-1298058:-1:exon
so has part: feature:1295245-1295361:-1:exon
so has part: feature:1293973-1294627:-1:exon

position:1298058:-1
position: 1298058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297976-1298058:-1:exon

position:1297976:-1
position: 1297976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1295245-1295361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1293973-1294627:-1:exon

LOC128794289
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794289
note: serine/arginine repetitive matrix protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1368312..1382208)
location: region:1368312-1382208:-1
so has part: feature:1368312-1382208:-1:exon
subclass of: SO_0000010

128794289
type: Gene
SIO_000068: ncbigene

position:1368312:-1
position: 1368312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382208:-1
position: 1382208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368312-1382208:-1:exon

LOC128794289
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794289
product: serine/arginine repetitive matrix protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_053954037.1
SIO_010081: LOC128794289
subclass of: SO_0000673
so part of: LOC128794289
location: complement(join(1368312..1368604,1369315..1370853,1382205..1382208))
location: region:1368312-1382208:-1
so has part: feature:1382205-1382208:-1:exon
so has part: feature:1369315-1370853:-1:exon
so has part: feature:1368312-1368604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1382205-1382208:-1:exon

position:1382205:-1
position: 1382205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1369315-1370853:-1:exon

position:1369315:-1
position: 1369315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370853:-1
position: 1370853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1368312-1368604:-1:exon

position:1368604:-1
position: 1368604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794289
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794289
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1-like
translation: MKRGSSIPASQREAAPSQHPGERQLHPSSQREAAPSLIPERGSSIPHPRERQLHPCTPERGSSIPHPRERQLHPSTLERGSSIPASQREAAPSLIPERGSSIPASQREAAPSLIPERGSSIPESQREAAPSLHPGERQLHPSSQREAAPSLIPERGSSIPAPWREAAPSQHPGERQLHPSSQREAAPSLHPRERQLHPNIPERGSSIPESQREAAPSQHPRERQLHPSSQREAAPSLNPRERQLHPCTPERGSSIPHPRERQLHPSTLERGSSIPAPWREAAPSLIPERGSSIPASQREAAPSQHPRERQLHP
SIO_010081: LOC128794289
subclass of: SO_0000673
so part of: LOC128794289
location: complement(join(1369916..1370853,1382205..1382208))
location: region:1369916-1382208:-1
so has part: feature:1382205-1382208:-1:exon
so has part: feature:1369916-1370853:-1:exon

XP_053810012.1
type: Protein
SIO_000068: ncbiprotein

position:1369916:-1
position: 1369916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382205-1382208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369916-1370853:-1:exon

EDEM1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: EDEM1
note: ER degradation enhancing alpha-mannosidase like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1388252..1404036)
location: region:1388252-1404036:-1
so has part: feature:1388252-1404036:-1:exon
subclass of: SO_0000010

128794384
type: Gene
SIO_000068: ncbigene

position:1388252:-1
position: 1388252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404036:-1
position: 1404036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1388252-1404036:-1:exon

EDEM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: EDEM1
product: ER degradation enhancing alpha-mannosidase like protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954182.1
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1388252..1390976,1391855..1392040,1392775..1392871,1393586..1393659,1394237..1394407,1394796..1394916,1396438..1396612,1397104..1397287,1398383..1398554,1399324..1399427,1401362..1401434,1402598..1404036))
location: region:1388252-1404036:-1
so has part: feature:1402598-1404036:-1:exon
so has part: feature:1401362-1401434:-1:exon
so has part: feature:1399324-1399427:-1:exon
so has part: feature:1398383-1398554:-1:exon
so has part: feature:1397104-1397287:-1:exon
so has part: feature:1396438-1396612:-1:exon
so has part: feature:1394796-1394916:-1:exon
so has part: feature:1394237-1394407:-1:exon
so has part: feature:1393586-1393659:-1:exon
so has part: feature:1392775-1392871:-1:exon
so has part: feature:1391855-1392040:-1:exon
so has part: feature:1388252-1390976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1402598-1404036:-1:exon

position:1402598:-1
position: 1402598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1401362-1401434:-1:exon

position:1401362:-1
position: 1401362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401434:-1
position: 1401434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1399324-1399427:-1:exon

position:1399324:-1
position: 1399324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399427:-1
position: 1399427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1398383-1398554:-1:exon

position:1398383:-1
position: 1398383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398554:-1
position: 1398554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1397104-1397287:-1:exon

position:1397104:-1
position: 1397104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397287:-1
position: 1397287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1396438-1396612:-1:exon

position:1396438:-1
position: 1396438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396612:-1
position: 1396612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1394796-1394916:-1:exon

position:1394796:-1
position: 1394796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394916:-1
position: 1394916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1394237-1394407:-1:exon

position:1394237:-1
position: 1394237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394407:-1
position: 1394407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1393586-1393659:-1:exon

position:1393586:-1
position: 1393586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393659:-1
position: 1393659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1392775-1392871:-1:exon

position:1392775:-1
position: 1392775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392871:-1
position: 1392871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1391855-1392040:-1:exon

position:1391855:-1
position: 1391855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392040:-1
position: 1392040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1388252-1390976:-1:exon

position:1390976:-1
position: 1390976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDEM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: EDEM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 1
translation: MRWRSVVLGLLLLRLGLQALLVLLPALARGLCLHPRLPCPGPRPPALPGPPAGAAGRGARLWGAAAGGDEYERRYSGAFPPQLRARLRDAARGMFVFGYDSYMEHAFPRDELDPLHCRGRGPDRRDPSNLNINDVLGNYSLTLIDALDTLAVMGNSSEFQKAVKLVIDTVSFDKDSTVQVFEATIRVLGSLLSAHIIITDTKQPFGDMTIKDYDNELLHLAHDLAVRLLPAFENTKTGIPYPRVNLKKGVPPDSHNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWSLRSNNTGLLGNVVNIQTGHWVGKQSGLGAGSDSFYEYLLKSYILFGEKEDLEMFNAAYQNIQNHLRRGREACNEGEGDPPLYVNVNMYTGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVPFYPLRPELVESTYLLYQATKNPFYLHVGMDILQSLEKYTKAKCGYATLHHVVEKTKEDRMESFFLSETCKYLYLLFDEENPVHKSGNKFMFTTEGHVVSVDERFRTSLWEDILPAQEGSAHKTKATELKAANFSSNCNRVPDERRYLLPLKSNYMRQIDRMVGLI
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1390887..1390976,1391855..1392040,1392775..1392871,1393586..1393659,1394237..1394407,1394796..1394916,1396438..1396612,1397104..1397287,1398383..1398554,1399324..1399427,1401362..1401434,1402598..1402977))
location: region:1390887-1402977:-1
so has part: feature:1402598-1402977:-1:exon
so has part: feature:1401362-1401434:-1:exon
so has part: feature:1399324-1399427:-1:exon
so has part: feature:1398383-1398554:-1:exon
so has part: feature:1397104-1397287:-1:exon
so has part: feature:1396438-1396612:-1:exon
so has part: feature:1394796-1394916:-1:exon
so has part: feature:1394237-1394407:-1:exon
so has part: feature:1393586-1393659:-1:exon
so has part: feature:1392775-1392871:-1:exon
so has part: feature:1391855-1392040:-1:exon
so has part: feature:1390887-1390976:-1:exon

XP_053810157.1
type: Protein
SIO_000068: ncbiprotein

position:1390887:-1
position: 1390887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402977:-1
position: 1402977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402598-1402977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401362-1401434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1399324-1399427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1398383-1398554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397104-1397287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1396438-1396612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1394796-1394916:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1394237-1394407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393586-1393659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1392775-1392871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1391855-1392040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1390887-1390976:-1:exon

ARL8B
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: ARL8B
note: ADP ribosylation factor like GTPase 8B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1404795..1421480)
location: region:1404795-1421480:-1
so has part: feature:1404795-1421480:-1:exon
subclass of: SO_0000010

128794385
type: Gene
SIO_000068: ncbigene

position:1404795:-1
position: 1404795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421480:-1
position: 1421480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404795-1421480:-1:exon

ARL8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: ARL8B
product: ADP ribosylation factor like GTPase 8B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954183.1
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(1404795..1409019,1410429..1410499,1410730..1410797,1411404..1411497,1411916..1411989,1412569..1412649,1421203..1421480))
location: region:1404795-1421480:-1
so has part: feature:1421203-1421480:-1:exon
so has part: feature:1412569-1412649:-1:exon
so has part: feature:1411916-1411989:-1:exon
so has part: feature:1411404-1411497:-1:exon
so has part: feature:1410730-1410797:-1:exon
so has part: feature:1410429-1410499:-1:exon
so has part: feature:1404795-1409019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1421203-1421480:-1:exon

position:1421203:-1
position: 1421203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1412569-1412649:-1:exon

position:1412569:-1
position: 1412569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412649:-1
position: 1412649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1411916-1411989:-1:exon

position:1411916:-1
position: 1411916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411989:-1
position: 1411989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1411404-1411497:-1:exon

position:1411404:-1
position: 1411404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411497:-1
position: 1411497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1410730-1410797:-1:exon

position:1410730:-1
position: 1410730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410797:-1
position: 1410797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1410429-1410499:-1:exon

position:1410429:-1
position: 1410429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410499:-1
position: 1410499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1404795-1409019:-1:exon

position:1409019:-1
position: 1409019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: ARL8B
product: ADP ribosylation factor like GTPase 8B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954184.1
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(1404795..1409019,1410429..1410499,1410730..1410797,1411404..1411497,1411916..1411989,1412569..1412649,1420596..1420883))
location: region:1404795-1420883:-1
so has part: feature:1420596-1420883:-1:exon
so has part: feature:1412569-1412649:-1:exon
so has part: feature:1411916-1411989:-1:exon
so has part: feature:1411404-1411497:-1:exon
so has part: feature:1410730-1410797:-1:exon
so has part: feature:1410429-1410499:-1:exon
so has part: feature:1404795-1409019:-1:exon

position:1420883:-1
position: 1420883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420596-1420883:-1:exon

position:1420596:-1
position: 1420596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1412569-1412649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1411916-1411989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1411404-1411497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410730-1410797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410429-1410499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1404795-1409019:-1:exon

ARL8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: ARL8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 8B isoform X1
translation: MLALLSRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADRDKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWLIQHSKSRRS
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(1408970..1409019,1410429..1410499,1410730..1410797,1411404..1411497,1411916..1411989,1412569..1412649,1421203..1421325))
location: region:1408970-1421325:-1
so has part: feature:1421203-1421325:-1:exon
so has part: feature:1412569-1412649:-1:exon
so has part: feature:1411916-1411989:-1:exon
so has part: feature:1411404-1411497:-1:exon
so has part: feature:1410730-1410797:-1:exon
so has part: feature:1410429-1410499:-1:exon
so has part: feature:1408970-1409019:-1:exon

XP_053810158.1
type: Protein
SIO_000068: ncbiprotein

position:1408970:-1
position: 1408970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421325:-1
position: 1421325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421203-1421325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412569-1412649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1411916-1411989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1411404-1411497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410730-1410797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410429-1410499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408970-1409019:-1:exon

ARL8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: ARL8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 8B isoform X2
translation: MCLEQSGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADRDKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWLIQHSKSRRS
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(1408970..1409019,1410429..1410499,1410730..1410797,1411404..1411497,1411916..1411989,1412569..1412649,1420596..1420610))
location: region:1408970-1420610:-1
so has part: feature:1420596-1420610:-1:exon
so has part: feature:1412569-1412649:-1:exon
so has part: feature:1411916-1411989:-1:exon
so has part: feature:1411404-1411497:-1:exon
so has part: feature:1410730-1410797:-1:exon
so has part: feature:1410429-1410499:-1:exon
so has part: feature:1408970-1409019:-1:exon

XP_053810159.1
type: Protein
SIO_000068: ncbiprotein

position:1420610:-1
position: 1420610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420596-1420610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412569-1412649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1411916-1411989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1411404-1411497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410730-1410797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410429-1410499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408970-1409019:-1:exon

BHLHE40
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: BHLHE40
note: basic helix-loop-helix family member e40; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1439149..1444612)
location: region:1439149-1444612:-1
so has part: feature:1439149-1444612:-1:exon
subclass of: SO_0000010

128794332
type: Gene
SIO_000068: ncbigene

position:1439149:-1
position: 1439149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444612:-1
position: 1444612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439149-1444612:-1:exon

BHLHE40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: BHLHE40
product: basic helix-loop-helix family member e40
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954092.1
SIO_010081: BHLHE40
subclass of: SO_0000673
so part of: BHLHE40
location: complement(join(1439149..1442260,1443263..1443386,1443928..1444035,1444267..1444336,1444435..1444612))
location: region:1439149-1444612:-1
so has part: feature:1444435-1444612:-1:exon
so has part: feature:1444267-1444336:-1:exon
so has part: feature:1443928-1444035:-1:exon
so has part: feature:1443263-1443386:-1:exon
so has part: feature:1439149-1442260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1444435-1444612:-1:exon

position:1444435:-1
position: 1444435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1444267-1444336:-1:exon

position:1444267:-1
position: 1444267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444336:-1
position: 1444336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1443928-1444035:-1:exon

position:1443928:-1
position: 1443928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444035:-1
position: 1444035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1443263-1443386:-1:exon

position:1443263:-1
position: 1443263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443386:-1
position: 1443386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1439149-1442260:-1:exon

position:1442260:-1
position: 1442260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BHLHE40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: BHLHE40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class E basic helix-loop-helix protein 40
translation: MERIPSAQPPPGCLGKLPALESGDLPGLDFAHMYQVYKPRRGLKRSEDNKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIEQQQQKIIALQSGLQAGDLSSRNLDSSQEMFRSGFQMCAKEMLQYLAKHENGKELKSSQLVSHLHRMASEVLQGGAARKAGDIPPKMDLKEKPAPLGEGHGKNCVPVIQRTFAHSSGEQSGSDTDTDSGYGGELEKSDSKPEQPYFKKDTDLKYAVQERISSIKQETEDPPAKRSRLESPQDEGPFGSDMMGSPSSFLGPHAHQPPLCLPFYLIPPSATAYLPMLEKCWYPASVPVLYPSLPASAAALTGFMNPDKISPPLLMPQRLPSPVPAHSPIDSSALLQALKQIPPLNLETKD
SIO_010081: BHLHE40
subclass of: SO_0000673
so part of: BHLHE40
location: complement(join(1441413..1442260,1443263..1443386,1443928..1444035,1444267..1444336,1444435..1444514))
location: region:1441413-1444514:-1
so has part: feature:1444435-1444514:-1:exon
so has part: feature:1444267-1444336:-1:exon
so has part: feature:1443928-1444035:-1:exon
so has part: feature:1443263-1443386:-1:exon
so has part: feature:1441413-1442260:-1:exon

XP_053810067.1
type: Protein
SIO_000068: ncbiprotein

position:1441413:-1
position: 1441413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444514:-1
position: 1444514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444435-1444514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444267-1444336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443928-1444035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443263-1443386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441413-1442260:-1:exon

ITPR1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: ITPR1
note: inositol 1,4,5-trisphosphate receptor type 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1491434..1651218)
location: region:1491434-1651218:-1
so has part: feature:1491434-1651218:-1:exon
subclass of: SO_0000010

128793998
type: Gene
SIO_000068: ncbigene

position:1491434:-1
position: 1491434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1651218:-1
position: 1651218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491434-1651218:-1:exon

ITPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: ITPR1
product: inositol 1,4,5-trisphosphate receptor type 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953544.1
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1491434..1492809,1497600..1497761,1508770..1508930,1509955..1510120,1511536..1511675,1513631..1513732,1514254..1514449,1516332..1516496,1517172..1517347,1520063..1520185,1522834..1523026,1523938..1524042,1525020..1525142,1525593..1525688,1526982..1527092,1528228..1528428,1532250..1532503,1533097..1533277,1547273..1547463,1548404..1548536,1551775..1551825,1553318..1553353,1564743..1564769,1568492..1568603,1569466..1569614,1570480..1570664,1571738..1571858,1574763..1574891,1575567..1575692,1576226..1576477,1578048..1578248,1578612..1578737,1580233..1580370,1581079..1581144,1582070..1582240,1582341..1582502,1582879..1582937,1583113..1583251,1584812..1584999,1585816..1585969,1586941..1587082,1590041..1590292,1594259..1594453,1595519..1595638,1595889..1596061,1596626..1596784,1597268..1597409,1598142..1598302,1598740..1598839,1599723..1599874,1602732..1602776,1603800..1603895,1605099..1605245,1605328..1605411,1605932..1606030,1606865..1607023,1607722..1607808,1611215..1611330,1639473..1639543,1643145..1643252,1651143..1651218))
location: region:1491434-1651218:-1
so has part: feature:1651143-1651218:-1:exon
so has part: feature:1643145-1643252:-1:exon
so has part: feature:1639473-1639543:-1:exon
so has part: feature:1611215-1611330:-1:exon
so has part: feature:1607722-1607808:-1:exon
so has part: feature:1606865-1607023:-1:exon
so has part: feature:1605932-1606030:-1:exon
so has part: feature:1605328-1605411:-1:exon
so has part: feature:1605099-1605245:-1:exon
so has part: feature:1603800-1603895:-1:exon
so has part: feature:1602732-1602776:-1:exon
so has part: feature:1599723-1599874:-1:exon
so has part: feature:1598740-1598839:-1:exon
so has part: feature:1598142-1598302:-1:exon
so has part: feature:1597268-1597409:-1:exon
so has part: feature:1596626-1596784:-1:exon
so has part: feature:1595889-1596061:-1:exon
so has part: feature:1595519-1595638:-1:exon
so has part: feature:1594259-1594453:-1:exon
so has part: feature:1590041-1590292:-1:exon
so has part: feature:1586941-1587082:-1:exon
so has part: feature:1585816-1585969:-1:exon
so has part: feature:1584812-1584999:-1:exon
so has part: feature:1583113-1583251:-1:exon
so has part: feature:1582879-1582937:-1:exon
so has part: feature:1582341-1582502:-1:exon
so has part: feature:1582070-1582240:-1:exon
so has part: feature:1581079-1581144:-1:exon
so has part: feature:1580233-1580370:-1:exon
so has part: feature:1578612-1578737:-1:exon
so has part: feature:1578048-1578248:-1:exon
so has part: feature:1576226-1576477:-1:exon
so has part: feature:1575567-1575692:-1:exon
so has part: feature:1574763-1574891:-1:exon
so has part: feature:1571738-1571858:-1:exon
so has part: feature:1570480-1570664:-1:exon
so has part: feature:1569466-1569614:-1:exon
so has part: feature:1568492-1568603:-1:exon
so has part: feature:1564743-1564769:-1:exon
so has part: feature:1553318-1553353:-1:exon
so has part: feature:1551775-1551825:-1:exon
so has part: feature:1548404-1548536:-1:exon
so has part: feature:1547273-1547463:-1:exon
so has part: feature:1533097-1533277:-1:exon
so has part: feature:1532250-1532503:-1:exon
so has part: feature:1528228-1528428:-1:exon
so has part: feature:1526982-1527092:-1:exon
so has part: feature:1525593-1525688:-1:exon
so has part: feature:1525020-1525142:-1:exon
so has part: feature:1523938-1524042:-1:exon
so has part: feature:1522834-1523026:-1:exon
so has part: feature:1520063-1520185:-1:exon
so has part: feature:1517172-1517347:-1:exon
so has part: feature:1516332-1516496:-1:exon
so has part: feature:1514254-1514449:-1:exon
so has part: feature:1513631-1513732:-1:exon
so has part: feature:1511536-1511675:-1:exon
so has part: feature:1509955-1510120:-1:exon
so has part: feature:1508770-1508930:-1:exon
so has part: feature:1497600-1497761:-1:exon
so has part: feature:1491434-1492809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1651143-1651218:-1:exon

position:1651143:-1
position: 1651143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1643145-1643252:-1:exon

position:1643145:-1
position: 1643145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643252:-1
position: 1643252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1639473-1639543:-1:exon

position:1639473:-1
position: 1639473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1639543:-1
position: 1639543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1611215-1611330:-1:exon

position:1611215:-1
position: 1611215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611330:-1
position: 1611330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1607722-1607808:-1:exon

position:1607722:-1
position: 1607722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607808:-1
position: 1607808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1606865-1607023:-1:exon

position:1606865:-1
position: 1606865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607023:-1
position: 1607023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1605932-1606030:-1:exon

position:1605932:-1
position: 1605932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606030:-1
position: 1606030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1605328-1605411:-1:exon

position:1605328:-1
position: 1605328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605411:-1
position: 1605411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1605099-1605245:-1:exon

position:1605099:-1
position: 1605099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605245:-1
position: 1605245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1603800-1603895:-1:exon

position:1603800:-1
position: 1603800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603895:-1
position: 1603895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1602732-1602776:-1:exon

position:1602732:-1
position: 1602732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602776:-1
position: 1602776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1599723-1599874:-1:exon

position:1599723:-1
position: 1599723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599874:-1
position: 1599874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1598740-1598839:-1:exon

position:1598740:-1
position: 1598740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598839:-1
position: 1598839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1598142-1598302:-1:exon

position:1598142:-1
position: 1598142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598302:-1
position: 1598302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1597268-1597409:-1:exon

position:1597268:-1
position: 1597268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597409:-1
position: 1597409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1596626-1596784:-1:exon

position:1596626:-1
position: 1596626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596784:-1
position: 1596784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1595889-1596061:-1:exon

position:1595889:-1
position: 1595889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596061:-1
position: 1596061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1595519-1595638:-1:exon

position:1595519:-1
position: 1595519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595638:-1
position: 1595638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1594259-1594453:-1:exon

position:1594259:-1
position: 1594259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594453:-1
position: 1594453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1590041-1590292:-1:exon

position:1590041:-1
position: 1590041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590292:-1
position: 1590292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1586941-1587082:-1:exon

position:1586941:-1
position: 1586941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587082:-1
position: 1587082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1585816-1585969:-1:exon

position:1585816:-1
position: 1585816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585969:-1
position: 1585969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1584812-1584999:-1:exon

position:1584812:-1
position: 1584812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584999:-1
position: 1584999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1583113-1583251:-1:exon

position:1583113:-1
position: 1583113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583251:-1
position: 1583251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1582879-1582937:-1:exon

position:1582879:-1
position: 1582879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582937:-1
position: 1582937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1582341-1582502:-1:exon

position:1582341:-1
position: 1582341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582502:-1
position: 1582502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1582070-1582240:-1:exon

position:1582070:-1
position: 1582070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582240:-1
position: 1582240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1581079-1581144:-1:exon

position:1581079:-1
position: 1581079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581144:-1
position: 1581144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1580233-1580370:-1:exon

position:1580233:-1
position: 1580233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580370:-1
position: 1580370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1578612-1578737:-1:exon

position:1578612:-1
position: 1578612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578737:-1
position: 1578737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1578048-1578248:-1:exon

position:1578048:-1
position: 1578048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578248:-1
position: 1578248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1576226-1576477:-1:exon

position:1576226:-1
position: 1576226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576477:-1
position: 1576477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1575567-1575692:-1:exon

position:1575567:-1
position: 1575567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575692:-1
position: 1575692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1574763-1574891:-1:exon

position:1574763:-1
position: 1574763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574891:-1
position: 1574891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1571738-1571858:-1:exon

position:1571738:-1
position: 1571738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571858:-1
position: 1571858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1570480-1570664:-1:exon

position:1570480:-1
position: 1570480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570664:-1
position: 1570664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1569466-1569614:-1:exon

position:1569466:-1
position: 1569466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569614:-1
position: 1569614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1568492-1568603:-1:exon

position:1568492:-1
position: 1568492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568603:-1
position: 1568603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1564743-1564769:-1:exon

position:1564743:-1
position: 1564743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564769:-1
position: 1564769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1553318-1553353:-1:exon

position:1553318:-1
position: 1553318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553353:-1
position: 1553353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1551775-1551825:-1:exon

position:1551775:-1
position: 1551775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551825:-1
position: 1551825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1548404-1548536:-1:exon

position:1548404:-1
position: 1548404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548536:-1
position: 1548536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1547273-1547463:-1:exon

position:1547273:-1
position: 1547273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547463:-1
position: 1547463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1533097-1533277:-1:exon

position:1533097:-1
position: 1533097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533277:-1
position: 1533277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1532250-1532503:-1:exon

position:1532250:-1
position: 1532250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532503:-1
position: 1532503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1528228-1528428:-1:exon

position:1528228:-1
position: 1528228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528428:-1
position: 1528428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1526982-1527092:-1:exon

position:1526982:-1
position: 1526982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527092:-1
position: 1527092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1525593-1525688:-1:exon

position:1525593:-1
position: 1525593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525688:-1
position: 1525688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1525020-1525142:-1:exon

position:1525020:-1
position: 1525020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525142:-1
position: 1525142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1523938-1524042:-1:exon

position:1523938:-1
position: 1523938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524042:-1
position: 1524042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1522834-1523026:-1:exon

position:1522834:-1
position: 1522834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523026:-1
position: 1523026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1520063-1520185:-1:exon

position:1520063:-1
position: 1520063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520185:-1
position: 1520185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1517172-1517347:-1:exon

position:1517172:-1
position: 1517172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517347:-1
position: 1517347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1516332-1516496:-1:exon

position:1516332:-1
position: 1516332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516496:-1
position: 1516496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1514254-1514449:-1:exon

position:1514254:-1
position: 1514254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514449:-1
position: 1514449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1513631-1513732:-1:exon

position:1513631:-1
position: 1513631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513732:-1
position: 1513732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1511536-1511675:-1:exon

position:1511536:-1
position: 1511536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511675:-1
position: 1511675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:1509955-1510120:-1:exon

position:1509955:-1
position: 1509955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510120:-1
position: 1510120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:1508770-1508930:-1:exon

position:1508770:-1
position: 1508770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508930:-1
position: 1508930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:1497600-1497761:-1:exon

position:1497600:-1
position: 1497600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497761:-1
position: 1497761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:1491434-1492809:-1:exon

position:1492809:-1
position: 1492809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: ITPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor type 1
translation: MEEREPPPRGSKPEMTDKMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAAKPGANSTTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVNPDYEEDDLECQSSLDPEQEAARRGRGAQEKMAYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPVKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPANADILIETKLVLSRFEFEEVSSGENALEVGEDEEEVWLFWRDSSKEIRSKSIRELAQDAKEGQKEDRDVLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMADENLPYDLRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSEIAIDDYDSSGTSKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFCDLLRLTKILLAILDCVHITTIFPITKMAKGEESKGSNVMRSIHGVGELMTQVVLRGGGFLPMTPLAAAPEGNVKQSEPEKEDILVMDTKLKIIEILQFILNVRLDYRISCLLCIFKHEFDESNAQMSESPTGSSSQEMPANVPGALDFEHIEEQAEGIFGGRKENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQIKQDLDQLRSIVEKSELWVYKGQGPDEAMDSVPGENEHKKKEEGHSKSQKPESTSSYNYRVVKEILLRLSKLCVQEGASVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAEDTRMQEIMKLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNAGEDVLVFYNDRASFQTLVQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSVLEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCTWLMPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHNIVQKTAMNWRMTARNAARRDSVLAASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKITIELDNAELPQAPETESPVEQELDQTLPQRQLEDHRRGEALRQVLVNRYYGNVRAAGRRESLTAFGNGPLSAGGPGKAGPGGGSSGSSSMSRGEMSLADVQCHLDKEGASNLVIDLIMNATSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDEDSDRDVPNRKRVREPMTQITEEVRDQLLEASAATRKAYTTYRREADPEEHYSAGEGAQAAADKSKDELEMSAVISIMQPILRFLQLLCENHNRDLQNFLRC…
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1492720..1492809,1497600..1497761,1508770..1508930,1509955..1510120,1511536..1511675,1513631..1513732,1514254..1514449,1516332..1516496,1517172..1517347,1520063..1520185,1522834..1523026,1523938..1524042,1525020..1525142,1525593..1525688,1526982..1527092,1528228..1528428,1532250..1532503,1533097..1533277,1547273..1547463,1548404..1548536,1551775..1551825,1553318..1553353,1564743..1564769,1568492..1568603,1569466..1569614,1570480..1570664,1571738..1571858,1574763..1574891,1575567..1575692,1576226..1576477,1578048..1578248,1578612..1578737,1580233..1580370,1581079..1581144,1582070..1582240,1582341..1582502,1582879..1582937,1583113..1583251,1584812..1584999,1585816..1585969,1586941..1587082,1590041..1590292,1594259..1594453,1595519..1595638,1595889..1596061,1596626..1596784,1597268..1597409,1598142..1598302,1598740..1598839,1599723..1599874,1602732..1602776,1603800..1603895,1605099..1605245,1605328..1605411,1605932..1606030,1606865..1607023,1607722..1607808,1611215..1611330,1639473..1639543,1643145..1643252,1651143..1651168))
location: region:1492720-1651168:-1
so has part: feature:1651143-1651168:-1:exon
so has part: feature:1643145-1643252:-1:exon
so has part: feature:1639473-1639543:-1:exon
so has part: feature:1611215-1611330:-1:exon
so has part: feature:1607722-1607808:-1:exon
so has part: feature:1606865-1607023:-1:exon
so has part: feature:1605932-1606030:-1:exon
so has part: feature:1605328-1605411:-1:exon
so has part: feature:1605099-1605245:-1:exon
so has part: feature:1603800-1603895:-1:exon
so has part: feature:1602732-1602776:-1:exon
so has part: feature:1599723-1599874:-1:exon
so has part: feature:1598740-1598839:-1:exon
so has part: feature:1598142-1598302:-1:exon
so has part: feature:1597268-1597409:-1:exon
so has part: feature:1596626-1596784:-1:exon
so has part: feature:1595889-1596061:-1:exon
so has part: feature:1595519-1595638:-1:exon
so has part: feature:1594259-1594453:-1:exon
so has part: feature:1590041-1590292:-1:exon
so has part: feature:1586941-1587082:-1:exon
so has part: feature:1585816-1585969:-1:exon
so has part: feature:1584812-1584999:-1:exon
so has part: feature:1583113-1583251:-1:exon
so has part: feature:1582879-1582937:-1:exon
so has part: feature:1582341-1582502:-1:exon
so has part: feature:1582070-1582240:-1:exon
so has part: feature:1581079-1581144:-1:exon
so has part: feature:1580233-1580370:-1:exon
so has part: feature:1578612-1578737:-1:exon
so has part: feature:1578048-1578248:-1:exon
so has part: feature:1576226-1576477:-1:exon
so has part: feature:1575567-1575692:-1:exon
so has part: feature:1574763-1574891:-1:exon
so has part: feature:1571738-1571858:-1:exon
so has part: feature:1570480-1570664:-1:exon
so has part: feature:1569466-1569614:-1:exon
so has part: feature:1568492-1568603:-1:exon
so has part: feature:1564743-1564769:-1:exon
so has part: feature:1553318-1553353:-1:exon
so has part: feature:1551775-1551825:-1:exon
so has part: feature:1548404-1548536:-1:exon
so has part: feature:1547273-1547463:-1:exon
so has part: feature:1533097-1533277:-1:exon
so has part: feature:1532250-1532503:-1:exon
so has part: feature:1528228-1528428:-1:exon
so has part: feature:1526982-1527092:-1:exon
so has part: feature:1525593-1525688:-1:exon
so has part: feature:1525020-1525142:-1:exon
so has part: feature:1523938-1524042:-1:exon
so has part: feature:1522834-1523026:-1:exon
so has part: feature:1520063-1520185:-1:exon
so has part: feature:1517172-1517347:-1:exon
so has part: feature:1516332-1516496:-1:exon
so has part: feature:1514254-1514449:-1:exon
so has part: feature:1513631-1513732:-1:exon
so has part: feature:1511536-1511675:-1:exon
so has part: feature:1509955-1510120:-1:exon
so has part: feature:1508770-1508930:-1:exon
so has part: feature:1497600-1497761:-1:exon
so has part: feature:1492720-1492809:-1:exon

XP_053809519.1
type: Protein
SIO_000068: ncbiprotein

position:1492720:-1
position: 1492720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1651168:-1
position: 1651168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651143-1651168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1643145-1643252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1639473-1639543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1611215-1611330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1607722-1607808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1606865-1607023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1605932-1606030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1605328-1605411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1605099-1605245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1603800-1603895:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1602732-1602776:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1599723-1599874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598740-1598839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598142-1598302:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1597268-1597409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1596626-1596784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1595889-1596061:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1595519-1595638:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1594259-1594453:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1590041-1590292:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1586941-1587082:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1585816-1585969:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1584812-1584999:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1583113-1583251:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1582879-1582937:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1582341-1582502:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1582070-1582240:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1581079-1581144:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1580233-1580370:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1578612-1578737:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1578048-1578248:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1576226-1576477:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1575567-1575692:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1574763-1574891:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1571738-1571858:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1570480-1570664:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1569466-1569614:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1568492-1568603:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1564743-1564769:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1553318-1553353:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1551775-1551825:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1548404-1548536:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1547273-1547463:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1533097-1533277:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1532250-1532503:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1528228-1528428:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1526982-1527092:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1525593-1525688:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1525020-1525142:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1523938-1524042:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1522834-1523026:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1520063-1520185:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1517172-1517347:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1516332-1516496:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1514254-1514449:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1513631-1513732:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1511536-1511675:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1509955-1510120:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1508770-1508930:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1497600-1497761:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1492720-1492809:-1:exon

LOC128794036
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794036
note: uncharacterized LOC128794036; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1660349..1662508)
location: region:1660349-1662508:-1
so has part: feature:1660349-1662508:-1:exon
subclass of: SO_0000011

128794036
type: Gene
SIO_000068: ncbigene

position:1660349:-1
position: 1660349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662508:-1
position: 1662508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660349-1662508:-1:exon

LOC128794036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794036
product: uncharacterized LOC128794036
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008432970.1
SIO_010081: LOC128794036
subclass of: SO_0000673
so part of: LOC128794036
location: complement(join(1660349..1661745,1661863..1662508))
location: region:1660349-1662508:-1
so has part: feature:1661863-1662508:-1:exon
so has part: feature:1660349-1661745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1661863-1662508:-1:exon

position:1661863:-1
position: 1661863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1660349-1661745:-1:exon

position:1661745:-1
position: 1661745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: SUMF1
note: sulfatase modifying factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1662561..1685238
location: region:1662561-1685238:1
so has part: feature:1662561-1685238:1:exon
subclass of: SO_0000010

128794033
type: Gene
SIO_000068: ncbigene

position:1662561:1
position: 1662561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685238:1
position: 1685238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662561-1685238:1:exon

SUMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953612.1
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1662561..1662797,1664826..1664999,1666666..1666740,1674983..1675065,1677695..1677817,1678344..1678458,1679271..1679384,1682929..1682988,1684396..1685238)
location: region:1662561-1685238:1
so has part: feature:1662561-1662797:1:exon
so has part: feature:1664826-1664999:1:exon
so has part: feature:1666666-1666740:1:exon
so has part: feature:1674983-1675065:1:exon
so has part: feature:1677695-1677817:1:exon
so has part: feature:1678344-1678458:1:exon
so has part: feature:1679271-1679384:1:exon
so has part: feature:1682929-1682988:1:exon
so has part: feature:1684396-1685238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1662561-1662797:1:exon

position:1662797:1
position: 1662797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1664826-1664999:1:exon

position:1664826:1
position: 1664826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664999:1
position: 1664999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1666666-1666740:1:exon

position:1666666:1
position: 1666666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666740:1
position: 1666740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1674983-1675065:1:exon

position:1674983:1
position: 1674983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675065:1
position: 1675065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1677695-1677817:1:exon

position:1677695:1
position: 1677695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677817:1
position: 1677817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1678344-1678458:1:exon

position:1678344:1
position: 1678344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678458:1
position: 1678458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1679271-1679384:1:exon

position:1679271:1
position: 1679271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679384:1
position: 1679384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1682929-1682988:1:exon

position:1682929:1
position: 1682929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682988:1
position: 1682988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1684396-1685238:1:exon

position:1684396:1
position: 1684396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUMF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 81927
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XR_008432968.1
SIO_010081: SUMF1
so part of: SUMF1
location: join(1662561..1662797,1664826..1664999,1666666..1666740,1674983..1675065,1677695..1677817,1678344..1678458,1679271..1679384,1679836..1679962,1682929..1682994)
location: region:1662561-1682994:1
so has part: feature:1662561-1662797:1:exon
so has part: feature:1664826-1664999:1:exon
so has part: feature:1666666-1666740:1:exon
so has part: feature:1674983-1675065:1:exon
so has part: feature:1677695-1677817:1:exon
so has part: feature:1678344-1678458:1:exon
so has part: feature:1679271-1679384:1:exon
so has part: feature:1679836-1679962:1:exon
so has part: feature:1682929-1682994:1:exon

position:1682994:1
position: 1682994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662561-1662797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1664826-1664999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1666666-1666740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674983-1675065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677695-1677817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678344-1678458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679271-1679384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679836-1679962:1:exon

position:1679836:1
position: 1679836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679962:1
position: 1679962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1682929-1682994:1:exon

SUMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: SUMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formylglycine-generating enzyme
translation: MAAPSRPWRCLLPLLLLAVRVGTGTGTGTAAAAGTPGTAGCGCGADRAAGDGREAAARRYSAAAGSGRSAGRGPMVLIPGGVFTMGTQEPEIQQDGEGPARRVRLGSFLMDQYEVSNQDFESFVSATGYVTEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPDSSISSRMDHPVLHVSWNDAVAFCAWAGKRLPTEAEWEYSCRGGLENRLFPWGNKLQPKGQHYANIWQGEFPTNNTAEDGYKGTAPVSAFPPNAYGLYNMVGNAWEWTSDWWAVHHSPQELHNPKGPSSGTDRVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAADTAPGPR
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1662576..1662797,1664826..1664999,1666666..1666740,1674983..1675065,1677695..1677817,1678344..1678458,1679271..1679384,1682929..1682988,1684396..1684506)
location: region:1662576-1684506:1
so has part: feature:1662576-1662797:1:exon
so has part: feature:1664826-1664999:1:exon
so has part: feature:1666666-1666740:1:exon
so has part: feature:1674983-1675065:1:exon
so has part: feature:1677695-1677817:1:exon
so has part: feature:1678344-1678458:1:exon
so has part: feature:1679271-1679384:1:exon
so has part: feature:1682929-1682988:1:exon
so has part: feature:1684396-1684506:1:exon

XP_053809587.1
type: Protein
SIO_000068: ncbiprotein

position:1662576:1
position: 1662576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684506:1
position: 1684506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662576-1662797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1664826-1664999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1666666-1666740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674983-1675065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677695-1677817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678344-1678458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679271-1679384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1682929-1682988:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684396-1684506:1:exon

LOC128794032
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794032
note: histone-lysine N-methyltransferase SETMAR; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1688205..1692028)
location: region:1688205-1692028:-1
so has part: feature:1688205-1692028:-1:exon
subclass of: SO_0000010

128794032
type: Gene
SIO_000068: ncbigene

position:1688205:-1
position: 1688205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692028:-1
position: 1692028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1688205-1692028:-1:exon

LOC128794032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794032
product: histone-lysine N-methyltransferase SETMAR, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953611.1
SIO_010081: LOC128794032
subclass of: SO_0000673
so part of: LOC128794032
location: complement(join(1688205..1689435,1690740..1690881,1691552..1692028))
location: region:1688205-1692028:-1
so has part: feature:1691552-1692028:-1:exon
so has part: feature:1690740-1690881:-1:exon
so has part: feature:1688205-1689435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1691552-1692028:-1:exon

position:1691552:-1
position: 1691552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690740-1690881:-1:exon

position:1690740:-1
position: 1690740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690881:-1
position: 1690881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1688205-1689435:-1:exon

position:1689435:-1
position: 1689435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794032
product: histone-lysine N-methyltransferase SETMAR, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953610.1
SIO_010081: LOC128794032
subclass of: SO_0000673
so part of: LOC128794032
location: complement(join(1688205..1689435,1690740..1692028))
location: region:1688205-1692028:-1
so has part: feature:1690740-1692028:-1:exon
so has part: feature:1688205-1689435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1690740-1692028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1688205-1689435:-1:exon

LOC128794032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETMAR isoform X2
translation: MDASAPHAPHEAVWRRSLGREGAELVPRHFPAPSRGRLRPWAGPGRERHRPRAANGCGLLRRGRGADMADLSGGSEAVAVALWPPGEAPPAFQYSPDSVAGADGELDPTEVTFPGCSCRSSSCAAAECPCLSRGHDSPRLGLPEQHEQPFSRPVFECNSLCCCGEGCQNRLVQRGLQLRLQVFRTQRKGWGVRALEPVPRGSFVCEYAGEVLGFAEAQRRIQAQSPQEPNYIIAVREHLHDGRVMETFVDPTRIGNVGRFLNHSCEPNLFMVPVRVDSMVPKLALFAAADISAGEELSYDYSGRFHNSPGASREHKPLEEENSLRKPCYCGSRTCASFLPWDSSLFSTPASSP
SIO_010081: LOC128794032
subclass of: SO_0000673
so part of: LOC128794032
location: complement(join(1688653..1689435,1690740..1690881,1691552..1691688))
location: region:1688653-1691688:-1
so has part: feature:1691552-1691688:-1:exon
so has part: feature:1690740-1690881:-1:exon
so has part: feature:1688653-1689435:-1:exon

XP_053809586.1
type: Protein
SIO_000068: ncbiprotein

position:1688653:-1
position: 1688653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691688:-1
position: 1691688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691552-1691688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690740-1690881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1688653-1689435:-1:exon

LOC128794032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETMAR isoform X1
translation: MRALHTHRTKRFGGAASVGRERSWCLGISPHPAEGGCVPGRDRAGVERERNRGGTGPVCNGRGTGAGAGPVRTGPVCNGRGTGAGAGPVWNGPVWSGRGTGVEREWDRGGEEWERGGTGARPAWNGSGAGSVWNGGGSGTGVERERGRDQCGTGAGAGPVWNGSGSGAGTGVERGRGRCGTGAGPVWNGSGAGVEPERGRCGTGAGRGGAGVEGERGRDRCGTGAGPVWDGGEQGRGSLTAPAPLRVGPCHTAPPSRRAVNHFPCPISERHRPRAANGCGLLRRGRGADMADLSGGSEAVAVALWPPGEAPPAFQYSPDSVAGADGELDPTEVTFPGCSCRSSSCAAAECPCLSRGHDSPRLGLPEQHEQPFSRPVFECNSLCCCGEGCQNRLVQRGLQLRLQVFRTQRKGWGVRALEPVPRGSFVCEYAGEVLGFAEAQRRIQAQSPQEPNYIIAVREHLHDGRVMETFVDPTRIGNVGRFLNHSCEPNLFMVPVRVDSMVPKLALFAAADISAGEELSYDYSGRFHNSPGASREHKPLEEENSLRKPCYCGSRTCASFLPWDSSLFSTPASSP
SIO_010081: LOC128794032
subclass of: SO_0000673
so part of: LOC128794032
location: complement(join(1688653..1689435,1690740..1691684))
location: region:1688653-1691684:-1
so has part: feature:1690740-1691684:-1:exon
so has part: feature:1688653-1689435:-1:exon

XP_053809585.1
type: Protein
SIO_000068: ncbiprotein

position:1691684:-1
position: 1691684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690740-1691684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1688653-1689435:-1:exon

LOC128794035
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794035
note: uncharacterized LOC128794035; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1691800..1692681
location: region:1691800-1692681:1
so has part: feature:1691800-1692681:1:exon
subclass of: SO_0000011

128794035
type: Gene
SIO_000068: ncbigene

position:1691800:1
position: 1691800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692681:1
position: 1692681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691800-1692681:1:exon

LOC128794035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794035
product: uncharacterized LOC128794035
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008432969.1
SIO_010081: LOC128794035
subclass of: SO_0000673
so part of: LOC128794035
location: join(1691800..1691889,1692022..1692681)
location: region:1691800-1692681:1
so has part: feature:1691800-1691889:1:exon
so has part: feature:1692022-1692681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1691800-1691889:1:exon

position:1691889:1
position: 1691889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1692022-1692681:1:exon

position:1692022:1
position: 1692022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRN1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LRRN1
note: leucine rich repeat neuronal 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1783468..1802343)
location: region:1783468-1802343:-1
so has part: feature:1783468-1802343:-1:exon
subclass of: SO_0000010

128794220
type: Gene
SIO_000068: ncbigene

position:1783468:-1
position: 1783468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1802343:-1
position: 1802343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1783468-1802343:-1:exon

LRRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LRRN1
product: leucine rich repeat neuronal 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953928.1
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(join(1783468..1787338,1802225..1802343))
location: region:1783468-1802343:-1
so has part: feature:1802225-1802343:-1:exon
so has part: feature:1783468-1787338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1802225-1802343:-1:exon

position:1802225:-1
position: 1802225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1783468-1787338:-1:exon

position:1787338:-1
position: 1787338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LRRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 1
translation: MAKVRVVLTVCQLVLELLMNSLTESSIQSSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTKIPSNLSSDTQVLLLQSNNIAKTTDELQQLFNLTELDFSQNNFTSIRDVGLSNLTQLTTLHLEENQITEMTDYCLQDLCNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALEKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRNVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYRGQQVKEVLIQDSNEQCLPMISHETFPNHLNLDIGMTVFLDCRAMAEPEPEIYWVTPLGNKVTVESLSDKYKLSSEGTLEISNIQVEDSGRYTCVAQNIEGADTRVATIRVNGTLLDGTQVLKIYVKQAESHSILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPSTDYEVCLTVSNIHQQTQRSCVNVTTKNAAFALDISDQETSTALAAVMGSMFAVISLASVSVYIAKRFKRKNYHHSLKKYMQKTSSIPLNELYPPLINLWEGDSEKDKDGSAETKPTQVDTSRSYYMW
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(1784955..1787105)
location: region:1784955-1787105:-1
so has part: feature:1784955-1787105:-1:exon

XP_053809903.1
type: Protein
SIO_000068: ncbiprotein

position:1784955:-1
position: 1784955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787105:-1
position: 1787105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784955-1787105:-1:exon

LOC128794228
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794228
note: uncharacterized LOC128794228; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1957267..1958108)
location: region:1957267-1958108:-1
so has part: feature:1957267-1958108:-1:exon
subclass of: SO_0000011

128794228
type: Gene
SIO_000068: ncbigene

position:1957267:-1
position: 1957267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958108:-1
position: 1958108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957267-1958108:-1:exon

LOC128794228
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794228
product: uncharacterized LOC128794228
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433030.1
SIO_010081: LOC128794228
subclass of: SO_0000673
so part of: LOC128794228
location: complement(join(1957267..1957599,1958027..1958108))
location: region:1957267-1958108:-1
so has part: feature:1958027-1958108:-1:exon
so has part: feature:1957267-1957599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1958027-1958108:-1:exon

position:1958027:-1
position: 1958027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1957267-1957599:-1:exon

position:1957599:-1
position: 1957599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRBN
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: CRBN
note: cereblon; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1958236..1975550
location: region:1958236-1975550:1
so has part: feature:1958236-1975550:1:exon
subclass of: SO_0000010

128794221
type: Gene
SIO_000068: ncbigene

position:1958236:1
position: 1958236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1975550:1
position: 1975550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958236-1975550:1:exon

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CRBN
product: cereblon, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953929.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958236..1958384,1961584..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1975550)
location: region:1958236-1975550:1
so has part: feature:1958236-1958384:1:exon
so has part: feature:1961584-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1975550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1958236-1958384:1:exon

position:1958384:1
position: 1958384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1961584-1961696:1:exon

position:1961584:1
position: 1961584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1961696:1
position: 1961696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

position:1962252:1
position: 1962252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1962454:1
position: 1962454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

position:1963297:1
position: 1963297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1963446:1
position: 1963446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

position:1964810:1
position: 1964810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1964972:1
position: 1964972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

position:1966286:1
position: 1966286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1966348:1
position: 1966348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

position:1966755:1
position: 1966755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1966839:1
position: 1966839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

position:1966974:1
position: 1966974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1967089:1
position: 1967089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

position:1969512:1
position: 1969512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1969576:1
position: 1969576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

position:1970743:1
position: 1970743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1970874:1
position: 1970874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1975550:1:exon

position:1972574:1
position: 1972574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CRBN
product: cereblon, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953930.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958236..1958384,1961587..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1975550)
location: region:1958236-1975550:1
so has part: feature:1958236-1958384:1:exon
so has part: feature:1961587-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1975550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1958236-1958384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961587-1961696:1:exon

position:1961587:1
position: 1961587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1975550:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X1
translation: MAAEDRGGEPRDNMGNHLQLVPVESEEEDDNEMEVEDQDSKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTVHDDDSCQVIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQKDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMSAVQLQSLSRCHVLPSSKPTSWQDRAIRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPIDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRICGSHMGWKFTATRKELSPPKFWGLTRSALLPRIPEDAEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958318..1958384,1961584..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1972757)
location: region:1958318-1972757:1
so has part: feature:1958318-1958384:1:exon
so has part: feature:1961584-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1972757:1:exon

XP_053809904.1
type: Protein
SIO_000068: ncbiprotein

position:1958318:1
position: 1958318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1972757:1
position: 1972757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958318-1958384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961584-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1972757:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X2
translation: MAAEDRGGEPRDNMGNHLQLVPESEEEDDNEMEVEDQDSKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTVHDDDSCQVIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQKDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMSAVQLQSLSRCHVLPSSKPTSWQDRAIRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPIDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRICGSHMGWKFTATRKELSPPKFWGLTRSALLPRIPEDAEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958318..1958384,1961587..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1972757)
location: region:1958318-1972757:1
so has part: feature:1958318-1958384:1:exon
so has part: feature:1961587-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1972757:1:exon

XP_053809905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1958318-1958384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961587-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1972757:1:exon

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CRBN
product: cereblon, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953931.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958705..1958772,1961584..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1975550)
location: region:1958705-1975550:1
so has part: feature:1958705-1958772:1:exon
so has part: feature:1961584-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1975550:1:exon

position:1958705:1
position: 1958705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958705-1958772:1:exon

position:1958772:1
position: 1958772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1961584-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1975550:1:exon

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CRBN
product: cereblon, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953933.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958718..1958748,1961584..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1975550)
location: region:1958718-1975550:1
so has part: feature:1958718-1958748:1:exon
so has part: feature:1961584-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1975550:1:exon

position:1958718:1
position: 1958718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958718-1958748:1:exon

position:1958748:1
position: 1958748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1961584-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1975550:1:exon

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CRBN
product: cereblon, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953932.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958726..1958772,1961587..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1975550)
location: region:1958726-1975550:1
so has part: feature:1958726-1958772:1:exon
so has part: feature:1961587-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1975550:1:exon

position:1958726:1
position: 1958726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958726-1958772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961587-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1975550:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X3
translation: MFPRGRGCSLEAVVESEEEDDNEMEVEDQDSKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTVHDDDSCQVIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQKDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMSAVQLQSLSRCHVLPSSKPTSWQDRAIRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPIDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRICGSHMGWKFTATRKELSPPKFWGLTRSALLPRIPEDAEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958733..1958772,1961584..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1972757)
location: region:1958733-1972757:1
so has part: feature:1958733-1958772:1:exon
so has part: feature:1961584-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1972757:1:exon

XP_053809906.1
type: Protein
SIO_000068: ncbiprotein

position:1958733:1
position: 1958733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958733-1958772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961584-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1972757:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X4
translation: MFPRGRGCSLEAVESEEEDDNEMEVEDQDSKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTVHDDDSCQVIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQKDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMSAVQLQSLSRCHVLPSSKPTSWQDRAIRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPIDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRICGSHMGWKFTATRKELSPPKFWGLTRSALLPRIPEDAEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958733..1958772,1961587..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1972757)
location: region:1958733-1972757:1
so has part: feature:1958733-1958772:1:exon
so has part: feature:1961587-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1972757:1:exon

XP_053809907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1958733-1958772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961587-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1972757:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X5
translation: MFPRGLESEEEDDNEMEVEDQDSKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTVHDDDSCQVIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQKDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMSAVQLQSLSRCHVLPSSKPTSWQDRAIRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPIDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRICGSHMGWKFTATRKELSPPKFWGLTRSALLPRIPEDAEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958733..1958748,1961584..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1972757)
location: region:1958733-1972757:1
so has part: feature:1958733-1958748:1:exon
so has part: feature:1961584-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1972757:1:exon

XP_053809908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1958733-1958748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961584-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1972757:1:exon

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: CRBN
product: cereblon, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953935.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1958740..1958768,1961584..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1975550)
location: region:1958740-1975550:1
so has part: feature:1958740-1958768:1:exon
so has part: feature:1961584-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1975550:1:exon

position:1958740:1
position: 1958740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958740-1958768:1:exon

position:1958768:1
position: 1958768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1961584-1961696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1972574-1975550:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X6
translation: MEVEDQDSKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTVHDDDSCQVIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQKDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMSAVQLQSLSRCHVLPSSKPTSWQDRAIRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPIDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRICGSHMGWKFTATRKELSPPKFWGLTRSALLPRIPEDAEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1961613..1961696,1962252..1962454,1963297..1963446,1964810..1964972,1966286..1966348,1966755..1966839,1966974..1967089,1969512..1969576,1970743..1970874,1972574..1972757)
location: region:1961613-1972757:1
so has part: feature:1961613-1961696:1:exon
so has part: feature:1962252-1962454:1:exon
so has part: feature:1963297-1963446:1:exon
so has part: feature:1964810-1964972:1:exon
so has part: feature:1966286-1966348:1:exon
so has part: feature:1966755-1966839:1:exon
so has part: feature:1966974-1967089:1:exon
so has part: feature:1969512-1969576:1:exon
so has part: feature:1970743-1970874:1:exon
so has part: feature:1972574-1972757:1:exon

XP_053809910.1
type: Protein
SIO_000068: ncbiprotein

position:1961613:1
position: 1961613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1961613-1961696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1962252-1962454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1963297-1963446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1964810-1964972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1966286-1966348:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966755-1966839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1966974-1967089:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1969512-1969576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1970743-1970874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1972574-1972757:1:exon

TRNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: TRNT1
note: tRNA nucleotidyl transferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1977078..1981999)
location: region:1977078-1981999:-1
so has part: feature:1977078-1981999:-1:exon
subclass of: SO_0000010

128794222
type: Gene
SIO_000068: ncbigene

position:1977078:-1
position: 1977078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1981999:-1
position: 1981999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977078-1981999:-1:exon

TRNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TRNT1
product: tRNA nucleotidyl transferase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953937.1
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(1977078..1978228,1978901..1979151,1979325..1979518,1979691..1979817,1980074..1980212,1980745..1980938,1981736..1981845,1981931..1981999))
location: region:1977078-1981999:-1
so has part: feature:1981931-1981999:-1:exon
so has part: feature:1981736-1981845:-1:exon
so has part: feature:1980745-1980938:-1:exon
so has part: feature:1980074-1980212:-1:exon
so has part: feature:1979691-1979817:-1:exon
so has part: feature:1979325-1979518:-1:exon
so has part: feature:1978901-1979151:-1:exon
so has part: feature:1977078-1978228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981931-1981999:-1:exon

position:1981931:-1
position: 1981931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1981736-1981845:-1:exon

position:1981736:-1
position: 1981736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1981845:-1
position: 1981845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1980745-1980938:-1:exon

position:1980745:-1
position: 1980745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980938:-1
position: 1980938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1980074-1980212:-1:exon

position:1980074:-1
position: 1980074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980212:-1
position: 1980212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1979691-1979817:-1:exon

position:1979691:-1
position: 1979691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979817:-1
position: 1979817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1979325-1979518:-1:exon

position:1979325:-1
position: 1979325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979518:-1
position: 1979518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1978901-1979151:-1:exon

position:1978901:-1
position: 1978901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979151:-1
position: 1979151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1977078-1978228:-1:exon

position:1978228:-1
position: 1978228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: TRNT1
product: tRNA nucleotidyl transferase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953936.1
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(1977078..1978228,1978901..1979151,1979325..1979518,1979691..1979817,1980074..1980212,1980745..1980938,1981736..1981978))
location: region:1977078-1981978:-1
so has part: feature:1981736-1981978:-1:exon
so has part: feature:1980745-1980938:-1:exon
so has part: feature:1980074-1980212:-1:exon
so has part: feature:1979691-1979817:-1:exon
so has part: feature:1979325-1979518:-1:exon
so has part: feature:1978901-1979151:-1:exon
so has part: feature:1977078-1978228:-1:exon

position:1981978:-1
position: 1981978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981736-1981978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1980745-1980938:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1980074-1980212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1979691-1979817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1979325-1979518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1978901-1979151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1977078-1978228:-1:exon

TRNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TRNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X1
translation: MWAELLAVPRRAGLRLLHGRRHGGSGTMRLQAPQFQALFTPGLRSVAELFEKKNYELRIAGGAVRDLLSGVTPQDIDFATTATPAEMKEMFTAAGVRLINNKGEKHGTITARLHEQNFEITTLRIDVVTDGRHAEVEFTTDWHKDAERRDLTVNSMFLGLDGTLYDFFNGYEDLENKKIRFVGKAAERIQEDYLRILRYFRFYGRIAEKPGDHEPNTLQAIKENAKGLAGISGERIWVELKKILLGNHVNHLVQLMYELDIAQYIGLPLDGNSEEFARVSKNIQNLSPKPMTVLTSLFKGKDDVTNLDLRLKISKEEKNLGLFLVKHRQELTKGPGPEPLRPYQDFLMDSREANTSSKIFELLKYQGEEQLLKEMQEWTVPSFPVSGHDLRKMGVSSGKEIGTALQQLRDEWKKSGYHMDKEELLSCLKKL
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(1977980..1978228,1978901..1979151,1979325..1979518,1979691..1979817,1980074..1980212,1980745..1980938,1981736..1981877))
location: region:1977980-1981877:-1
so has part: feature:1981736-1981877:-1:exon
so has part: feature:1980745-1980938:-1:exon
so has part: feature:1980074-1980212:-1:exon
so has part: feature:1979691-1979817:-1:exon
so has part: feature:1979325-1979518:-1:exon
so has part: feature:1978901-1979151:-1:exon
so has part: feature:1977980-1978228:-1:exon

XP_053809911.1
type: Protein
SIO_000068: ncbiprotein

position:1977980:-1
position: 1977980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1981877:-1
position: 1981877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981736-1981877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1980745-1980938:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1980074-1980212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1979691-1979817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1979325-1979518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1978901-1979151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1977980-1978228:-1:exon

TRNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: TRNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X2
translation: MRLQAPQFQALFTPGLRSVAELFEKKNYELRIAGGAVRDLLSGVTPQDIDFATTATPAEMKEMFTAAGVRLINNKGEKHGTITARLHEQNFEITTLRIDVVTDGRHAEVEFTTDWHKDAERRDLTVNSMFLGLDGTLYDFFNGYEDLENKKIRFVGKAAERIQEDYLRILRYFRFYGRIAEKPGDHEPNTLQAIKENAKGLAGISGERIWVELKKILLGNHVNHLVQLMYELDIAQYIGLPLDGNSEEFARVSKNIQNLSPKPMTVLTSLFKGKDDVTNLDLRLKISKEEKNLGLFLVKHRQELTKGPGPEPLRPYQDFLMDSREANTSSKIFELLKYQGEEQLLKEMQEWTVPSFPVSGHDLRKMGVSSGKEIGTALQQLRDEWKKSGYHMDKEELLSCLKKL
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(1977980..1978228,1978901..1979151,1979325..1979518,1979691..1979817,1980074..1980212,1980745..1980938,1981736..1981796))
location: region:1977980-1981796:-1
so has part: feature:1981736-1981796:-1:exon
so has part: feature:1980745-1980938:-1:exon
so has part: feature:1980074-1980212:-1:exon
so has part: feature:1979691-1979817:-1:exon
so has part: feature:1979325-1979518:-1:exon
so has part: feature:1978901-1979151:-1:exon
so has part: feature:1977980-1978228:-1:exon

XP_053809912.1
type: Protein
SIO_000068: ncbiprotein

position:1981796:-1
position: 1981796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981736-1981796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1980745-1980938:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1980074-1980212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1979691-1979817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1979325-1979518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1978901-1979151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1977980-1978228:-1:exon

IL5RA
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: IL5RA
note: interleukin 5 receptor subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1987230..1993963
location: region:1987230-1993963:1
so has part: feature:1987230-1993963:1:exon
subclass of: SO_0000010

128794223
type: Gene
SIO_000068: ncbigene

position:1987230:1
position: 1987230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993963:1
position: 1993963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1987230-1993963:1:exon

IL5RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: IL5RA
product: interleukin 5 receptor subunit alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953938.1
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(1987230..1987327,1988471..1988616,1988923..1989061,1989898..1990030,1990106..1990296,1991272..1991417,1991837..1991975,1993256..1993352,1993781..1993963)
location: region:1987230-1993963:1
so has part: feature:1987230-1987327:1:exon
so has part: feature:1988471-1988616:1:exon
so has part: feature:1988923-1989061:1:exon
so has part: feature:1989898-1990030:1:exon
so has part: feature:1990106-1990296:1:exon
so has part: feature:1991272-1991417:1:exon
so has part: feature:1991837-1991975:1:exon
so has part: feature:1993256-1993352:1:exon
so has part: feature:1993781-1993963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1987230-1987327:1:exon

position:1987327:1
position: 1987327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1988471-1988616:1:exon

position:1988471:1
position: 1988471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988616:1
position: 1988616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1988923-1989061:1:exon

position:1988923:1
position: 1988923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989061:1
position: 1989061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1989898-1990030:1:exon

position:1989898:1
position: 1989898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1990030:1
position: 1990030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1990106-1990296:1:exon

position:1990106:1
position: 1990106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1990296:1
position: 1990296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1991272-1991417:1:exon

position:1991272:1
position: 1991272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991417:1
position: 1991417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1991837-1991975:1:exon

position:1991837:1
position: 1991837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991975:1
position: 1991975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1993256-1993352:1:exon

position:1993256:1
position: 1993256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993352:1
position: 1993352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1993781-1993963:1:exon

position:1993781:1
position: 1993781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL5RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: IL5RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-5 receptor subunit alpha
translation: MMASGMPVFLLLLWTTNTPQGAGVQVLPPVNFTLTVSALAQVLLHWEPNPAQEQNNATIRYDVKILSPVPEEYDTKRTHSVRTAALHNGFSARVRTLLLQEGLQMSSDWVEGNLPPLPGAAETSVTNLSCVTRVTIPGNVSLRCTWLPGQGAPEDTKYFLFYRYETHTEECPTYTKDKWSRNTECRFSSTQIKPGEIDNLIVIHINGSSQRAAIKPFQQLFNQNAIEKVNVPRNISISLEQNDLLAVWEKPISPFHEECFEYEFYLINLKSGNKQILKISSNTFRLRIDGSSRYSIRIRANHNHICCARGFWSDWSEIIYVGQNKLENSIAWILTLLCVSTSCTLLLVAIICQIGSGCYKGQNSPNVQ
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(1987258..1987327,1988471..1988616,1988923..1989061,1989898..1990030,1990106..1990296,1991272..1991417,1991837..1991975,1993256..1993352,1993781..1993826)
location: region:1987258-1993826:1
so has part: feature:1987258-1987327:1:exon
so has part: feature:1988471-1988616:1:exon
so has part: feature:1988923-1989061:1:exon
so has part: feature:1989898-1990030:1:exon
so has part: feature:1990106-1990296:1:exon
so has part: feature:1991272-1991417:1:exon
so has part: feature:1991837-1991975:1:exon
so has part: feature:1993256-1993352:1:exon
so has part: feature:1993781-1993826:1:exon

XP_053809913.1
type: Protein
SIO_000068: ncbiprotein

position:1987258:1
position: 1987258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993826:1
position: 1993826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1987258-1987327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988471-1988616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1988923-1989061:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1989898-1990030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1990106-1990296:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1991272-1991417:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1991837-1991975:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1993256-1993352:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1993781-1993826:1:exon

LOC128794225
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794225
note: uncharacterized LOC128794225; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2001428..2004213)
location: region:2001428-2004213:-1
so has part: feature:2001428-2004213:-1:exon
subclass of: SO_0000011

128794225
type: Gene
SIO_000068: ncbigene

position:2001428:-1
position: 2001428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004213:-1
position: 2004213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2001428-2004213:-1:exon

LOC128794225
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794225
product: uncharacterized LOC128794225, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433027.1
SIO_010081: LOC128794225
subclass of: SO_0000673
so part of: LOC128794225
location: complement(join(2001428..2001737,2002364..2002577,2003618..2003715,2004080..2004213))
location: region:2001428-2004213:-1
so has part: feature:2004080-2004213:-1:exon
so has part: feature:2003618-2003715:-1:exon
so has part: feature:2002364-2002577:-1:exon
so has part: feature:2001428-2001737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2004080-2004213:-1:exon

position:2004080:-1
position: 2004080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2003618-2003715:-1:exon

position:2003618:-1
position: 2003618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003715:-1
position: 2003715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2002364-2002577:-1:exon

position:2002364:-1
position: 2002364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002577:-1
position: 2002577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2001428-2001737:-1:exon

position:2001737:-1
position: 2001737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794225
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794225
product: uncharacterized LOC128794225, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433028.1
SIO_010081: LOC128794225
subclass of: SO_0000673
so part of: LOC128794225
location: complement(join(2001428..2001737,2002364..2002523,2003618..2004213))
location: region:2001428-2004213:-1
so has part: feature:2003618-2004213:-1:exon
so has part: feature:2002364-2002523:-1:exon
so has part: feature:2001428-2001737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2003618-2004213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2002364-2002523:-1:exon

position:2002523:-1
position: 2002523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2001428-2001737:-1:exon

LOC128794224
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794224
note: uncharacterized LOC128794224; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2004350..2005238
location: region:2004350-2005238:1
so has part: feature:2004350-2005238:1:exon
subclass of: SO_0000011

128794224
type: Gene
SIO_000068: ncbigene

position:2004350:1
position: 2004350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2005238:1
position: 2005238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2004350-2005238:1:exon

LOC128794224
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794224
product: uncharacterized LOC128794224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008433026.1
SIO_010081: LOC128794224
subclass of: SO_0000673
so part of: LOC128794224
location: join(2004350..2004780,2004883..2004962,2005151..2005238)
location: region:2004350-2005238:1
so has part: feature:2004350-2004780:1:exon
so has part: feature:2004883-2004962:1:exon
so has part: feature:2005151-2005238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2004350-2004780:1:exon

position:2004780:1
position: 2004780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2004883-2004962:1:exon

position:2004883:1
position: 2004883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2004962:1
position: 2004962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2005151-2005238:1:exon

position:2005151:1
position: 2005151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128794219
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794219
note: contactin-4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2004966..2289213)
location: region:2004966-2289213:-1
so has part: feature:2004966-2289213:-1:exon
subclass of: SO_0000010

128794219
type: Gene
SIO_000068: ncbigene

position:2004966:-1
position: 2004966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2289213:-1
position: 2289213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2004966-2289213:-1:exon

LOC128794219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794219
product: contactin-4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953926.1
SIO_010081: LOC128794219
subclass of: SO_0000673
so part of: LOC128794219
location: complement(join(2004966..2006741,2007645..2007813,2009100..2009212,2009708..2009894,2011048..2011163,2012522..2012756,2014767..2014837,2015256..2015405,2016935..2017093,2018559..2018679,2019696..2019871,2036403..2036530,2054390..2054540,2058803..2058932,2060950..2061086,2070463..2070647,2071256..2071358,2074732..2074935,2093129..2093224,2111230..2111405,2112674..2112800,2145089..2145223,2250822..2250866,2289135..2289213))
location: region:2004966-2289213:-1
so has part: feature:2289135-2289213:-1:exon
so has part: feature:2250822-2250866:-1:exon
so has part: feature:2145089-2145223:-1:exon
so has part: feature:2112674-2112800:-1:exon
so has part: feature:2111230-2111405:-1:exon
so has part: feature:2093129-2093224:-1:exon
so has part: feature:2074732-2074935:-1:exon
so has part: feature:2071256-2071358:-1:exon
so has part: feature:2070463-2070647:-1:exon
so has part: feature:2060950-2061086:-1:exon
so has part: feature:2058803-2058932:-1:exon
so has part: feature:2054390-2054540:-1:exon
so has part: feature:2036403-2036530:-1:exon
so has part: feature:2019696-2019871:-1:exon
so has part: feature:2018559-2018679:-1:exon
so has part: feature:2016935-2017093:-1:exon
so has part: feature:2015256-2015405:-1:exon
so has part: feature:2014767-2014837:-1:exon
so has part: feature:2012522-2012756:-1:exon
so has part: feature:2011048-2011163:-1:exon
so has part: feature:2009708-2009894:-1:exon
so has part: feature:2009100-2009212:-1:exon
so has part: feature:2007645-2007813:-1:exon
so has part: feature:2004966-2006741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2289135-2289213:-1:exon

position:2289135:-1
position: 2289135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2250822-2250866:-1:exon

position:2250822:-1
position: 2250822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2250866:-1
position: 2250866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2145089-2145223:-1:exon

position:2145089:-1
position: 2145089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145223:-1
position: 2145223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2112674-2112800:-1:exon

position:2112674:-1
position: 2112674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112800:-1
position: 2112800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2111230-2111405:-1:exon

position:2111230:-1
position: 2111230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111405:-1
position: 2111405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2093129-2093224:-1:exon

position:2093129:-1
position: 2093129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093224:-1
position: 2093224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2074732-2074935:-1:exon

position:2074732:-1
position: 2074732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2074935:-1
position: 2074935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2071256-2071358:-1:exon

position:2071256:-1
position: 2071256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2071358:-1
position: 2071358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2070463-2070647:-1:exon

position:2070463:-1
position: 2070463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2070647:-1
position: 2070647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2060950-2061086:-1:exon

position:2060950:-1
position: 2060950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2061086:-1
position: 2061086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2058803-2058932:-1:exon

position:2058803:-1
position: 2058803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2058932:-1
position: 2058932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2054390-2054540:-1:exon

position:2054390:-1
position: 2054390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2054540:-1
position: 2054540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2036403-2036530:-1:exon

position:2036403:-1
position: 2036403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036530:-1
position: 2036530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2019696-2019871:-1:exon

position:2019696:-1
position: 2019696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019871:-1
position: 2019871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2018559-2018679:-1:exon

position:2018559:-1
position: 2018559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018679:-1
position: 2018679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2016935-2017093:-1:exon

position:2016935:-1
position: 2016935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2017093:-1
position: 2017093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2015256-2015405:-1:exon

position:2015256:-1
position: 2015256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2015405:-1
position: 2015405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2014767-2014837:-1:exon

position:2014767:-1
position: 2014767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2014837:-1
position: 2014837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2012522-2012756:-1:exon

position:2012522:-1
position: 2012522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2012756:-1
position: 2012756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2011048-2011163:-1:exon

position:2011048:-1
position: 2011048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2011163:-1
position: 2011163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2009708-2009894:-1:exon

position:2009708:-1
position: 2009708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009894:-1
position: 2009894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2009100-2009212:-1:exon

position:2009100:-1
position: 2009100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009212:-1
position: 2009212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2007645-2007813:-1:exon

position:2007645:-1
position: 2007645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007813:-1
position: 2007813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2004966-2006741:-1:exon

position:2006741:-1
position: 2006741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794219
product: contactin-4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053953927.1
SIO_010081: LOC128794219
subclass of: SO_0000673
so part of: LOC128794219
location: complement(join(2004966..2006741,2007645..2007813,2009100..2009212,2009708..2009894,2011048..2011163,2012522..2012756,2014767..2014837,2015256..2015405,2016935..2017093,2018559..2018679,2019696..2019871,2036403..2036530,2054390..2054540,2058803..2058932,2060950..2061086,2070463..2070647,2071256..2071358,2074732..2074935,2093129..2093224,2110561..2110588))
location: region:2004966-2110588:-1
so has part: feature:2110561-2110588:-1:exon
so has part: feature:2093129-2093224:-1:exon
so has part: feature:2074732-2074935:-1:exon
so has part: feature:2071256-2071358:-1:exon
so has part: feature:2070463-2070647:-1:exon
so has part: feature:2060950-2061086:-1:exon
so has part: feature:2058803-2058932:-1:exon
so has part: feature:2054390-2054540:-1:exon
so has part: feature:2036403-2036530:-1:exon
so has part: feature:2019696-2019871:-1:exon
so has part: feature:2018559-2018679:-1:exon
so has part: feature:2016935-2017093:-1:exon
so has part: feature:2015256-2015405:-1:exon
so has part: feature:2014767-2014837:-1:exon
so has part: feature:2012522-2012756:-1:exon
so has part: feature:2011048-2011163:-1:exon
so has part: feature:2009708-2009894:-1:exon
so has part: feature:2009100-2009212:-1:exon
so has part: feature:2007645-2007813:-1:exon
so has part: feature:2004966-2006741:-1:exon

position:2110588:-1
position: 2110588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2110561-2110588:-1:exon

position:2110561:-1
position: 2110561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2093129-2093224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2074732-2074935:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2071256-2071358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2070463-2070647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2060950-2061086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2058803-2058932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2054390-2054540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036403-2036530:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2019696-2019871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2018559-2018679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2016935-2017093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2015256-2015405:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2014767-2014837:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2012522-2012756:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2011048-2011163:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2009708-2009894:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2009100-2009212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2007645-2007813:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004966-2006741:-1:exon

LOC128794219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X1
translation: MRLLWELLVLHSVTVCLADDNTLHGPVFLQEPDSVIFPLDSEEKKVKLSCEVKGNPRPTIGWKLNGSSIDVGMDYRYSLLEGDLLINNPNKSQDAGMYQCVATNPFGTIVSREAQLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPTFVHQDNRRFVSQETGNLYIAKVETSDVGNYTCVVTNTVTNSKVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSAKGTTVKLECFALGNPVPTISWRRADGKQLPRKARRHRSSGLLEIPNFQQEDAGLYECVAENVRGKNVARGQLTFYAQPSWTQQISDVHAAIEERVSWECRASGRPKPSYRWLKDGEPLLPQGRVQLEQGSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSVIAIGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEVTESTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEIIDGRTFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASPDAARYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSISASDVEVSWAPPWENQHKGRIQGYEVRCWRHDEKEENAKRIRTVGNQTSTKVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTKKPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNREGSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSALSTIMISLTARSSL
SIO_010081: LOC128794219
subclass of: SO_0000673
so part of: LOC128794219
location: complement(join(2006641..2006741,2007645..2007813,2009100..2009212,2009708..2009894,2011048..2011163,2012522..2012756,2014767..2014837,2015256..2015405,2016935..2017093,2018559..2018679,2019696..2019871,2036403..2036530,2054390..2054540,2058803..2058932,2060950..2061086,2070463..2070647,2071256..2071358,2074732..2074935,2093129..2093224,2111230..2111405,2112674..2112800,2145089..2145143))
location: region:2006641-2145143:-1
so has part: feature:2145089-2145143:-1:exon
so has part: feature:2112674-2112800:-1:exon
so has part: feature:2111230-2111405:-1:exon
so has part: feature:2093129-2093224:-1:exon
so has part: feature:2074732-2074935:-1:exon
so has part: feature:2071256-2071358:-1:exon
so has part: feature:2070463-2070647:-1:exon
so has part: feature:2060950-2061086:-1:exon
so has part: feature:2058803-2058932:-1:exon
so has part: feature:2054390-2054540:-1:exon
so has part: feature:2036403-2036530:-1:exon
so has part: feature:2019696-2019871:-1:exon
so has part: feature:2018559-2018679:-1:exon
so has part: feature:2016935-2017093:-1:exon
so has part: feature:2015256-2015405:-1:exon
so has part: feature:2014767-2014837:-1:exon
so has part: feature:2012522-2012756:-1:exon
so has part: feature:2011048-2011163:-1:exon
so has part: feature:2009708-2009894:-1:exon
so has part: feature:2009100-2009212:-1:exon
so has part: feature:2007645-2007813:-1:exon
so has part: feature:2006641-2006741:-1:exon

XP_053809901.1
type: Protein
SIO_000068: ncbiprotein

position:2006641:-1
position: 2006641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145143:-1
position: 2145143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145089-2145143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2112674-2112800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2111230-2111405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2093129-2093224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2074732-2074935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2071256-2071358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2070463-2070647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2060950-2061086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2058803-2058932:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2054390-2054540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2036403-2036530:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2019696-2019871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2018559-2018679:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2016935-2017093:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2015256-2015405:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2014767-2014837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2012522-2012756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2011048-2011163:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2009708-2009894:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2009100-2009212:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2007645-2007813:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2006641-2006741:-1:exon

LOC128794219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X2
translation: MVLLCGPPPHSGELTYAWIFNEYPTFVHQDNRRFVSQETGNLYIAKVETSDVGNYTCVVTNTVTNSKVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSAKGTTVKLECFALGNPVPTISWRRADGKQLPRKARRHRSSGLLEIPNFQQEDAGLYECVAENVRGKNVARGQLTFYAQPSWTQQISDVHAAIEERVSWECRASGRPKPSYRWLKDGEPLLPQGRVQLEQGSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSVIAIGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEVTESTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEIIDGRTFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASPDAARYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSISASDVEVSWAPPWENQHKGRIQGYEVRCWRHDEKEENAKRIRTVGNQTSTKVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTKKPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNREGSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSALSTIMISLTARSSL
SIO_010081: LOC128794219
subclass of: SO_0000673
so part of: LOC128794219
location: complement(join(2006641..2006741,2007645..2007813,2009100..2009212,2009708..2009894,2011048..2011163,2012522..2012756,2014767..2014837,2015256..2015405,2016935..2017093,2018559..2018679,2019696..2019871,2036403..2036530,2054390..2054540,2058803..2058932,2060950..2061086,2070463..2070647,2071256..2071358,2074732..2074935,2093129..2093165))
location: region:2006641-2093165:-1
so has part: feature:2093129-2093165:-1:exon
so has part: feature:2074732-2074935:-1:exon
so has part: feature:2071256-2071358:-1:exon
so has part: feature:2070463-2070647:-1:exon
so has part: feature:2060950-2061086:-1:exon
so has part: feature:2058803-2058932:-1:exon
so has part: feature:2054390-2054540:-1:exon
so has part: feature:2036403-2036530:-1:exon
so has part: feature:2019696-2019871:-1:exon
so has part: feature:2018559-2018679:-1:exon
so has part: feature:2016935-2017093:-1:exon
so has part: feature:2015256-2015405:-1:exon
so has part: feature:2014767-2014837:-1:exon
so has part: feature:2012522-2012756:-1:exon
so has part: feature:2011048-2011163:-1:exon
so has part: feature:2009708-2009894:-1:exon
so has part: feature:2009100-2009212:-1:exon
so has part: feature:2007645-2007813:-1:exon
so has part: feature:2006641-2006741:-1:exon

XP_053809902.1
type: Protein
SIO_000068: ncbiprotein

position:2093165:-1
position: 2093165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2093129-2093165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2074732-2074935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2071256-2071358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2070463-2070647:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2060950-2061086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2058803-2058932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2054390-2054540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036403-2036530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2019696-2019871:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2018559-2018679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2016935-2017093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2015256-2015405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2014767-2014837:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2012522-2012756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2011048-2011163:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2009708-2009894:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2009100-2009212:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2007645-2007813:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2006641-2006741:-1:exon

LOC128794226
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794226
note: uncharacterized LOC128794226; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2113159..2114033
location: region:2113159-2114033:1
so has part: feature:2113159-2114033:1:exon
subclass of: SO_0000011

128794226
type: Gene
SIO_000068: ncbigene

position:2113159:1
position: 2113159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2114033:1
position: 2114033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2113159-2114033:1:exon

LOC128794226
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794226
product: uncharacterized LOC128794226
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433029.1
SIO_010081: LOC128794226
subclass of: SO_0000673
so part of: LOC128794226
location: join(2113159..2113296,2113592..2113728,2113836..2114033)
location: region:2113159-2114033:1
so has part: feature:2113159-2113296:1:exon
so has part: feature:2113592-2113728:1:exon
so has part: feature:2113836-2114033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2113159-2113296:1:exon

position:2113296:1
position: 2113296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2113592-2113728:1:exon

position:2113592:1
position: 2113592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113728:1
position: 2113728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2113836-2114033:1:exon

position:2113836:1
position: 2113836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128794160
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794160
note: uncharacterized LOC128794160; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2485863..2487012)
location: region:2485863-2487012:-1
so has part: feature:2485863-2487012:-1:exon
subclass of: SO_0000011

128794160
type: Gene
SIO_000068: ncbigene

position:2485863:-1
position: 2485863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487012:-1
position: 2487012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2485863-2487012:-1:exon

LOC128794160
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794160
product: uncharacterized LOC128794160, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433011.1
SIO_010081: LOC128794160
subclass of: SO_0000673
so part of: LOC128794160
location: complement(join(2485863..2486415,2486552..2486627,2486801..2487012))
location: region:2485863-2487012:-1
so has part: feature:2486801-2487012:-1:exon
so has part: feature:2486552-2486627:-1:exon
so has part: feature:2485863-2486415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2486801-2487012:-1:exon

position:2486801:-1
position: 2486801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2486552-2486627:-1:exon

position:2486552:-1
position: 2486552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486627:-1
position: 2486627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2485863-2486415:-1:exon

position:2486415:-1
position: 2486415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794160
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794160
product: uncharacterized LOC128794160, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433010.1
SIO_010081: LOC128794160
subclass of: SO_0000673
so part of: LOC128794160
location: complement(join(2485863..2486415,2486552..2487012))
location: region:2485863-2487012:-1
so has part: feature:2486552-2487012:-1:exon
so has part: feature:2485863-2486415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2486552-2487012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2485863-2486415:-1:exon

LOC128794277
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794277
note: uncharacterized LOC128794277; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2487139..2491047
location: region:2487139-2491047:1
so has part: feature:2487139-2491047:1:exon
subclass of: SO_0000011

128794277
type: Gene
SIO_000068: ncbigene

position:2487139:1
position: 2487139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2491047:1
position: 2491047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2487139-2491047:1:exon

LOC128794277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794277
product: uncharacterized LOC128794277, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433047.1
SIO_010081: LOC128794277
subclass of: SO_0000673
so part of: LOC128794277
location: join(2487139..2487199,2488781..2488881,2490889..2491047)
location: region:2487139-2491047:1
so has part: feature:2487139-2487199:1:exon
so has part: feature:2488781-2488881:1:exon
so has part: feature:2490889-2491047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2487139-2487199:1:exon

position:2487199:1
position: 2487199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2488781-2488881:1:exon

position:2488781:1
position: 2488781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488881:1
position: 2488881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2490889-2491047:1:exon

position:2490889:1
position: 2490889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128794277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 81927
nc RNA class: lncRNA
gene: LOC128794277
product: uncharacterized LOC128794277, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008433048.1
SIO_010081: LOC128794277
subclass of: SO_0000673
so part of: LOC128794277
location: join(2487147..2487199,2488599..2488881,2490889..2491047)
location: region:2487147-2491047:1
so has part: feature:2487147-2487199:1:exon
so has part: feature:2488599-2488881:1:exon
so has part: feature:2490889-2491047:1:exon

position:2487147:1
position: 2487147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2487147-2487199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2488599-2488881:1:exon

position:2488599:1
position: 2488599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2490889-2491047:1:exon

LOC128794276
type: Gene
subclass of: SO_0000704
RO_0002162: 81927
gene: LOC128794276
note: contactin-6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2490354..2615971)
location: region:2490354-2615971:-1
so has part: feature:2490354-2615971:-1:exon
subclass of: SO_0000010

128794276
type: Gene
SIO_000068: ncbigene

position:2490354:-1
position: 2490354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2615971:-1
position: 2615971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2490354-2615971:-1:exon

LOC128794276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 81927
gene: LOC128794276
product: contactin-6-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_053954023.1
SIO_010081: LOC128794276
subclass of: SO_0000673
so part of: LOC128794276
location: complement(join(2490354..2491018,2491685..2491853,2492565..2492677,2496040..2496226,2497447..2497562,2498075..2498309,2500415..2500485,2504463..2504612,2504705..2504863,2505657..2505774,2506130..2506305,2508363..2508490,2523795..2523945,2524910..2525039,2528867..2529003,2531143..2531327,2539332..2539434,2541526..2541729,2549639..2549734,2566517..2566641,2571846..2571972,2592860..2592997,2615781..2615971))
location: region:2490354-2615971:-1
so has part: feature:2615781-2615971:-1:exon
so has part: feature:2592860-2592997:-1:exon
so has part: feature:2571846-2571972:-1:exon
so has part: feature:2566517-2566641:-1:exon
so has part: feature:2549639-2549734:-1:exon
so has part: feature:2541526-2541729:-1:exon
so has part: feature:2539332-2539434:-1:exon
so has part: feature:2531143-2531327:-1:exon
so has part: feature:2528867-2529003:-1:exon
so has part: feature:2524910-2525039:-1:exon
so has part: feature:2523795-2523945:-1:exon
so has part: feature:2508363-2508490:-1:exon
so has part: feature:2506130-2506305:-1:exon
so has part: feature:2505657-2505774:-1:exon
so has part: feature:2504705-2504863:-1:exon
so has part: feature:2504463-2504612:-1:exon
so has part: feature:2500415-2500485:-1:exon
so has part: feature:2498075-2498309:-1:exon
so has part: feature:2497447-2497562:-1:exon
so has part: feature:2496040-2496226:-1:exon
so has part: feature:2492565-2492677:-1:exon
so has part: feature:2491685-2491853:-1:exon
so has part: feature:2490354-2491018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2615781-2615971:-1:exon

position:2615781:-1
position: 2615781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2592860-2592997:-1:exon

position:2592860:-1
position: 2592860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592997:-1
position: 2592997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2571846-2571972:-1:exon

position:2571846:-1
position: 2571846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571972:-1
position: 2571972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2566517-2566641:-1:exon

position:2566517:-1
position: 2566517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566641:-1
position: 2566641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2549639-2549734:-1:exon

position:2549639:-1
position: 2549639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549734:-1
position: 2549734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2541526-2541729:-1:exon

position:2541526:-1
position: 2541526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541729:-1
position: 2541729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2539332-2539434:-1:exon

position:2539332:-1
position: 2539332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539434:-1
position: 2539434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2531143-2531327:-1:exon

position:2531143:-1
position: 2531143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2531327:-1
position: 2531327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2528867-2529003:-1:exon

position:2528867:-1
position: 2528867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2529003:-1
position: 2529003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2524910-2525039:-1:exon

position:2524910:-1
position: 2524910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2525039:-1
position: 2525039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2523795-2523945:-1:exon

position:2523795:-1
position: 2523795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2523945:-1
position: 2523945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2508363-2508490:-1:exon

position:2508363:-1
position: 2508363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508490:-1
position: 2508490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2506130-2506305:-1:exon

position:2506130:-1
position: 2506130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2506305:-1
position: 2506305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2505657-2505774:-1:exon

position:2505657:-1
position: 2505657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2505774:-1
position: 2505774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2504705-2504863:-1:exon

position:2504705:-1
position: 2504705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504863:-1
position: 2504863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2504463-2504612:-1:exon

position:2504463:-1
position: 2504463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504612:-1
position: 2504612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2500415-2500485:-1:exon

position:2500415:-1
position: 2500415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2500485:-1
position: 2500485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2498075-2498309:-1:exon

position:2498075:-1
position: 2498075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498309:-1
position: 2498309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2497447-2497562:-1:exon

position:2497447:-1
position: 2497447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497562:-1
position: 2497562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2496040-2496226:-1:exon

position:2496040:-1
position: 2496040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2496226:-1
position: 2496226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2492565-2492677:-1:exon

position:2492565:-1
position: 2492565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492677:-1
position: 2492677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2491685-2491853:-1:exon

position:2491685:-1
position: 2491685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2491853:-1
position: 2491853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2490354-2491018:-1:exon

position:2491018:-1
position: 2491018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128794276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 81927
gene: LOC128794276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-6-like
translation: MVLLWKLISLLPFMSCSTGEETLHGPIFIQEPYDITYSMGSANAEILLNCTAKGYPLPYYRLVGGSLAINNPHKNQDIGTYQCLATNSFGTILSRKAKLQFAYLENFETRPRSPVSVREGQGVVLLCGTPPHHGGLSYTWIFNNNTLDLQEDSRRFVSQATGNLYLAKVEPWDVGNYTCAVSSAEAQRRAWGTPTALALRGDGVMGEYEPKIEVRFPETTYAAKGSSVRLECFALGNPVPSISWKRSDGSSLAKKIQHNRAGGVLEIPNVEQEDEGSYECIAGNTRGINIARGQLLVYAPPEWDKKIQNAFLSLYDSLFWECKARGKPSPSYSWLKNGQPLMSEERIQIENGTLLIPMLNLSDSGLYQCVAENEYDTIYANAELRVIAAAPDFSRNPVKKLSVVQVGGEVTISCKPSAAPRAVVSWRKGSEVLRQNKRVVFLEDGSLRISSISKVDAGVYTCVATNEFGTARNSGNLIVKERTVITIPPSDTDATVGESIVLPCQVSHDPSLDVLFSWSFNGQRIDLSRGIHHFERIGRESAGDLMIRNIQLHHSGKYVCTVQTSLDSQSAAADIIVRGPPGPPEDVKVEHVSSTTAGLSWKPGVENNSPVQIYSVQTRTPFSVGWQAVATAPEVINGRTHKATVVDLSPWVEYEFRVVASNSVGIGEPSRPSALLKTKAAVPVVAPTNISGGGGSRSELVITWEPVSEELQNGEGFGYVVMFRPLGSTTWTKAVVASVESSKYVYRNESITPLSPFEVKVGVYNNEGEGTLSSISIIYSGEDEPQMAPAGASALSVSAAAVEVSWLPIPWNRHTGRVLGYEVLYWIDDPKESTAGKVRVSGNVTAKNITGLRANTVYFATVRAYNTAGTGPSSTPVNVTTKKSPPSQPPANIAWKLTNSKICLNWEHVKTMENESEVLGYKILYRQNRQSKAHILETNNTSAELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKISSLSSGAVKLSQRINHTLASGILLLSSVLLNPFPCWFQQCSAVDF
SIO_010081: LOC128794276
subclass of: SO_0000673
so part of: LOC128794276
location: complement(join(2490885..2491018,2491685..2491853,2492565..2492677,2496040..2496226,2497447..2497562,2498075..2498309,2500415..2500485,2504463..2504612,2504705..2504863,2505657..2505774,2506130..2506305,2508363..2508490,2523795..2523945,2524910..2525039,2528867..2529003,2531143..2531327,2539332..2539434,2541526..2541729,2549639..2549734,2566517..2566641,2571846..2571972,2592860..2592914))
location: region:2490885-2592914:-1
so has part: feature:2592860-2592914:-1:exon
so has part: feature:2571846-2571972:-1:exon
so has part: feature:2566517-2566641:-1:exon
so has part: feature:2549639-2549734:-1:exon
so has part: feature:2541526-2541729:-1:exon
so has part: feature:2539332-2539434:-1:exon
so has part: feature:2531143-2531327:-1:exon
so has part: feature:2528867-2529003:-1:exon
so has part: feature:2524910-2525039:-1:exon
so has part: feature:2523795-2523945:-1:exon
so has part: feature:2508363-2508490:-1:exon
so has part: feature:2506130-2506305:-1:exon
so has part: feature:2505657-2505774:-1:exon
so has part: feature:2504705-2504863:-1:exon
so has part: feature:2504463-2504612:-1:exon
so has part: feature:2500415-2500485:-1:exon
so has part: feature:2498075-2498309:-1:exon
so has part: feature:2497447-2497562:-1:exon
so has part: feature:2496040-2496226:-1:exon
so has part: feature:2492565-2492677:-1:exon
so has part: feature:2491685-2491853:-1:exon
so has part: feature:2490885-2491018:-1:exon

XP_053809998.1
type: Protein
SIO_000068: ncbiprotein

position:2490885:-1
position: 2490885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592914:-1
position: 2592914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2592860-2592914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2571846-2571972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2566517-2566641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2549639-2549734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2541526-2541729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2539332-2539434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2531143-2531327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2528867-2529003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2524910-2525039:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2523795-2523945:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508363-2508490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2506130-2506305:-1:exon