Sparus aurata mitochondrial complete genome.
type: Entry
definition: Sparus aurata mitochondrial complete genome.
sequence version: NC_024236.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_024236.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
keyword: complete genome
source: mitochondrion Sparus aurata (gilthead seabream)
organism: Sparus aurata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus.
reference: 1
references: 24963773
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to LK022698.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16652
topology: circular
so has quality: SO_0000988
location: 1..16652
location: region:1-16652:1
RO_0002162: 8175

NC_024236
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete mitochondrial genome of the gilthead seabream Sparus aurata L. (Sparidae)
author: Dray, L.
author: Neuhof, M.
author: Diamant, A.
author: Huchon, D.
journal: Mitochondrial DNA
volume: 27
issue: 1
pages: 781-782
year: 2016
pubmed: 24963773

24963773
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (04-JUN-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Huchon, D.
journal: Submitted (24-APR-2014) Tel-Aviv University, Zoology, George S.Wise Faculty of Life Sciences, Ramat-Aviv, 69978, Tel-Aviv, ISRAEL

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16652:1
position: 16652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16652:1:source
so part of: sequence
organism: Sparus aurata
organelle: mitochondrion
mol type: genomic DNA
country: Israel:Fish farm
collection date: 2013

8175
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Phe
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:region

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8175
product: 12S ribosomal RNA
so part of: sequence
location: 69..1017
location: region:69-1017:1
so has part: feature:69-1017:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017:1
position: 1017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69-1017:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Val
so part of: sequence
location: 1018..1089
location: region:1018-1089:1
so has part: feature:1018-1089:1:region

position:1018:1
position: 1018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089:1
position: 1089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018-1089:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8175
product: 16S ribosomal RNA
so part of: sequence
location: 1090..2785
location: region:1090-2785:1
so has part: feature:1090-2785:1:region

position:1090:1
position: 1090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2785:1
position: 2785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090-2785:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Leu
so part of: sequence
location: 2786..2858
location: region:2786-2858:1
so has part: feature:2786-2858:1:region

position:2786:1
position: 2786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858:1
position: 2858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2786-2858:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ND1
so part of: sequence
location: 2859..3833
location: region:2859-3833:1
so has part: feature:2859-3833:1:exon
subclass of: SO_0000010

19555004
type: Gene
SIO_000068: ncbigene

position:2859:1
position: 2859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3833:1
position: 3833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2859-3833:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLSVLFTHLINPLAFIVPILLAVAFLTLLERKVLGYMQHRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPVLFLLAPILALTLALTLWAPMPLPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSTIIFAGGFTLQVFNVAQESVWLIIPAWPLAAMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSVTLFLGASHIPAFPELTAINLMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKSFLPLTLALVIWHLSLPIAFAGLPPHL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2859..3833
location: region:2859-3833:1
so has part: feature:2859-3833:1:exon

YP_009037612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2859-3833:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Ile
so part of: sequence
location: 3838..3907
location: region:3838-3907:1
so has part: feature:3838-3907:1:region

position:3838:1
position: 3838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3907:1
position: 3907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838-3907:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Gln
so part of: sequence
location: complement(3907..3977)
location: region:3907-3977:-1
so has part: feature:3907-3977:-1:region

position:3907:-1
position: 3907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3977:-1
position: 3977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3907-3977:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Met
so part of: sequence
location: 3977..4046
location: region:3977-4046:1
so has part: feature:3977-4046:1:region

position:3977:1
position: 3977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4046:1
position: 4046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3977-4046:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ND2
so part of: sequence
location: 4047..5092
location: region:4047-5092:1
so has part: feature:4047-5092:1:exon
subclass of: SO_0000010

19555010
type: Gene
SIO_000068: ncbigene

position:4047:1
position: 4047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092:1
position: 5092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047-5092:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5091..5092,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MSPFILATLLFALGLGTMITFASSHWLLAWMGLEINTLAILPLMAQHHHPRAIEATTKYFIAQATAAAMLLFASATNAWLTGQWDIQLMTHPLPVTLITLALALKMGLAPMHSWLPEVIQGVDFTTGLVLSTWQKLAPFVLLLQLQPTNSTLLLALGTASTLVGGWGGLNQTQLRKILAYSSIAHLGWMTIVLQFSPSLALLTLIVYFTMTFSAFLMFKLNNSTNLNSLAISWTKAPVATALAPLVLLSLGGLPPLTGFMSKWLILQELTKQDLMPLATLLALSALLSLYFYLRLAYSLTLTVSPNTLIGTTPWRHPTSHLTLLLSTSTVATVFLLPITPAIVTLFSL
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4047..5092
location: region:4047-5092:1
so has part: feature:4047-5092:1:exon

YP_009037613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4047-5092:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Trp
so part of: sequence
location: 5093..5162
location: region:5093-5162:1
so has part: feature:5093-5162:1:region

position:5093:1
position: 5093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5162:1
position: 5162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5093-5162:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Ala
so part of: sequence
location: complement(5163..5231)
location: region:5163-5231:-1
so has part: feature:5163-5231:-1:region

position:5163:-1
position: 5163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5231:-1
position: 5231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5163-5231:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Asn
so part of: sequence
location: complement(5233..5305)
location: region:5233-5305:-1
so has part: feature:5233-5305:-1:region

position:5233:-1
position: 5233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5305:-1
position: 5305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5233-5305:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Cys
so part of: sequence
location: complement(5341..5406)
location: region:5341-5406:-1
so has part: feature:5341-5406:-1:region

position:5341:-1
position: 5341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5406:-1
position: 5406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5341-5406:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Tyr
so part of: sequence
location: complement(5407..5476)
location: region:5407-5476:-1
so has part: feature:5407-5476:-1:region

position:5407:-1
position: 5407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5476:-1
position: 5476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5407-5476:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
alternative label: COI
gene: COX1
gene synonym: COI
so part of: sequence
location: 5478..7043
location: region:5478-7043:1
so has part: feature:5478-7043:1:exon
subclass of: SO_0000010

19555011
type: Gene
SIO_000068: ncbigene

position:5478:1
position: 5478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7043:1
position: 7043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5478-7043:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
alternative label: COI
gene: COX1
gene synonym: COI
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGTIKWETPMLWAIGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLHSTWTKIHFGIMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSIGSLISLVAVILFLFIIWEAFASKREVHSVEMASTNVEWLHGCPPPYHTFEEPAFVQVKLLNAEKG
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5478..7043
location: region:5478-7043:1
so has part: feature:5478-7043:1:exon

YP_009037614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5478-7043:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Ser
so part of: sequence
location: complement(7031..7101)
location: region:7031-7101:-1
so has part: feature:7031-7101:-1:region

position:7031:-1
position: 7031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7101:-1
position: 7101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7031-7101:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Asp
so part of: sequence
location: 7105..7177
location: region:7105-7177:1
so has part: feature:7105-7177:1:region

position:7105:1
position: 7105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7177:1
position: 7177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7105-7177:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
alternative label: COII
gene: COX2
gene synonym: COII
so part of: sequence
location: 7186..7876
location: region:7186-7876:1
so has part: feature:7186-7876:1:exon
subclass of: SO_0000010

19555007
type: Gene
SIO_000068: ncbigene

position:7186:1
position: 7186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7876:1
position: 7876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7186-7876:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
alternative label: COII
gene: COX2
gene synonym: COII
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7876,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAASPVMEELLHFHDHALMIVFLISTLVLYIIVAMVSTKLTNKYILDSQEIEVIWTILPAFILILIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYEDLGFDSYMLPTQDLAPGQFRLLEADHRMVIPVESPIRVLVSAEDVLHSWAVPSLGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVPLQYFEKWSSLMLEDT
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7186..7876
location: region:7186-7876:1
so has part: feature:7186-7876:1:exon

YP_009037615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7186-7876:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Lys
so part of: sequence
location: 7877..7950
location: region:7877-7950:1
so has part: feature:7877-7950:1:region

position:7877:1
position: 7877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7950:1
position: 7950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7877-7950:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ATP8
so part of: sequence
location: 7952..8116
location: region:7952-8116:1
so has part: feature:7952-8116:1:exon
subclass of: SO_0000010

19555008
type: Gene
SIO_000068: ncbigene

position:7952:1
position: 7952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8116:1
position: 8116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7952-8116:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPAPWFTILVFSWAIFLTILPLKVGAHTFPNEPTLQSTDTPKTESWTWPW
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7952..8116
location: region:7952-8116:1
so has part: feature:7952-8116:1:exon

YP_009037616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7952-8116:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ATP6
so part of: sequence
location: 8110..8793
location: region:8110-8793:1
so has part: feature:8110-8793:1:exon
subclass of: SO_0000010

19555006
type: Gene
SIO_000068: ncbigene

position:8110:1
position: 8110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8793:1
position: 8793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8110-8793:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MVTSFFDQFSSPLFMGIPLMALALLLPWILLPTPSSRWLNNRLLTLQNWFLGMFTRQLLLPINHPGHKWALILASLMIFLLSLNLLGLLPYTFTPTTQLSINLGFAVPLWLATVLIGLRNQPNLSLAHLLPEGTPLLLIPILIIIETISLMIRPLALGVRLTANLTAGHLLIQLISTGLFVLLSLQPAVAILTGALLLMLSLLEVAVAIIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8110..8793
location: region:8110-8793:1
so has part: feature:8110-8793:1:exon

YP_009037617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8110-8793:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
alternative label: COIII
gene: COX3
gene synonym: COIII
so part of: sequence
location: 8793..9577
location: region:8793-9577:1
so has part: feature:8793-9577:1:exon
subclass of: SO_0000010

19555005
type: Gene
SIO_000068: ncbigene

position:9577:1
position: 9577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8793-9577:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
alternative label: COIII
gene: COX3
gene synonym: COIII
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9576..9577,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAVAALLVTSGTAIWFHFNSTILMTLGTMLLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPDLGGCWPPAGITTLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGDRKPAIQSLALTILLGFYFTFLQGLEYFEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8793..9577
location: region:8793-9577:1
so has part: feature:8793-9577:1:exon

YP_009037618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8793-9577:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Gly
so part of: sequence
location: 9578..9649
location: region:9578-9649:1
so has part: feature:9578-9649:1:region

position:9578:1
position: 9578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9649:1
position: 9649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9578-9649:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ND3
so part of: sequence
location: 9650..9998
location: region:9650-9998:1
so has part: feature:9650-9998:1:exon
subclass of: SO_0000010

19555009
type: Gene
SIO_000068: ncbigene

position:9650:1
position: 9650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9998:1
position: 9998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9650-9998:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9998,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLVTTIIIITATLSVILAIVSFWLPQMSPDYEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLSSPLITFLWASTVLVLLTLGLIYEWLQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9650..9998
location: region:9650-9998:1
so has part: feature:9650-9998:1:exon

YP_009037619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9650-9998:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Arg
so part of: sequence
location: 9999..10069
location: region:9999-10069:1
so has part: feature:9999-10069:1:region

position:9999:1
position: 9999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10069:1
position: 10069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9999-10069:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ND4L
so part of: sequence
location: 10071..10367
location: region:10071-10367:1
so has part: feature:10071-10367:1:exon
subclass of: SO_0000010

19555012
type: Gene
SIO_000068: ncbigene

position:10071:1
position: 10071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10367:1
position: 10367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10071-10367:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFTFSSAFMLGLTGLTFHRTHLLSALLCLEGMMLSLFVALSLWALQLSSISFSASPLLLLAFSACEASAGLALLVATARTHGSDRMQSLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10071..10367
location: region:10071-10367:1
so has part: feature:10071-10367:1:exon

YP_009037620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10071-10367:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ND4
so part of: sequence
location: 10361..11741
location: region:10361-11741:1
so has part: feature:10361-11741:1:exon
subclass of: SO_0000010

19555014
type: Gene
SIO_000068: ncbigene

position:10361:1
position: 10361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11741:1
position: 11741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10361-11741:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11741,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILLPTLMLIPTAWLVPGKWLWPTTLLHSLIIALISLTWLTNLSEVGWSSLGSYLATDALSTPLLVLTCWLLPLMLLASQNHTASEPINRQRMYVTLLTSLQFFLILAFGATEVIMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNNAGSLSLLTLAYSPPMQLTTYGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRMLTILEPLTKELSYPFIIFALWGVLMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFSGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTAWWFIASLANLALPPLPNLMGELMIIVSLFNWSWWTLALTGAGTLITAGYSLYMFLMTQRGQLPTHITALEPSHSREHLLMALHLLPLILLVLKPELIWGWTA
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10361..11741
location: region:10361-11741:1
so has part: feature:10361-11741:1:exon

YP_009037621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10361-11741:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-His
so part of: sequence
location: 11742..11810
location: region:11742-11810:1
so has part: feature:11742-11810:1:region

position:11742:1
position: 11742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11810:1
position: 11810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11742-11810:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Ser
so part of: sequence
location: 11811..11878
location: region:11811-11878:1
so has part: feature:11811-11878:1:region

position:11811:1
position: 11811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11878:1
position: 11878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11811-11878:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Leu
so part of: sequence
location: 11885..11957
location: region:11885-11957:1
so has part: feature:11885-11957:1:region

position:11885:1
position: 11885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11957:1
position: 11957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11885-11957:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ND5
so part of: sequence
location: 11958..13799
location: region:11958-13799:1
so has part: feature:11958-13799:1:exon
subclass of: SO_0000010

19555013
type: Gene
SIO_000068: ncbigene

position:11958:1
position: 11958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13799:1
position: 13799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11958-13799:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MLPTSLMMTSSLILVFFLLSYPVLTTLHPNPREEGWALLKVKTAVKLAFFVSLLPLFLLFNEGAEVIVTNWNWTNTLIFDINISFKFDHYSTIFTPIALYVTWSILEFASWYMHADPYMNRFFKYLLIFLIAMIVLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRVGDIGLIFAMAWMATNLNSWEMQQMFVSAKGLDLTFPLIGLIVAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVTGIFLLIRMSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGMHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNNSNLNAWALAATLLATSFTAIYSLRVVFFVSMGHPRFLPLSPINENNPAVINPIKRLAWGSIIAGLLITSNIIPHKTSILTMPPLLKLAALIVTILGLIIALELASLTSKQFKPTSQLTLHHFSNMLGFFPAVTHRLVPKLNLILGQAIASQAIDQTWLEKVGPKAVTSLNVPIVAMVSNTQRGMIKTYLTLFLLTLTFAVLLLAFK
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11958..13799
location: region:11958-13799:1
so has part: feature:11958-13799:1:exon

YP_009037622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11958-13799:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: ND6
so part of: sequence
location: complement(13792..14313)
location: region:13792-14313:-1
so has part: feature:13792-14313:-1:exon
subclass of: SO_0000010

19555015
type: Gene
SIO_000068: ncbigene

position:13792:-1
position: 13792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14313:-1
position: 14313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13792-14313:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MSFFMSLLLLGLVLGLIVVASNPSPYFAALGLVVAAGVGCGILVWHGGSFLCFILFLIYLGGMLVVFAYCAALAADSHWESLGSQSVAATMLVYGVSVGVLAGGFYGGWYESSWLTVEEFHELAVHRGDAAGVALMYMPGGKMLMIAAWTLLLTLFVVMELVRGKNRGALRSI
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13792..14313)
location: region:13792-14313:-1
so has part: feature:13792-14313:-1:exon

YP_009037623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13792-14313:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Glu
so part of: sequence
location: complement(14314..14382)
location: region:14314-14382:-1
so has part: feature:14314-14382:-1:region

position:14314:-1
position: 14314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14382:-1
position: 14382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14314-14382:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 8175
gene: CYTB
so part of: sequence
location: 14387..15527
location: region:14387-15527:1
so has part: feature:14387-15527:1:exon
subclass of: SO_0000010

19555016
type: Gene
SIO_000068: ncbigene

position:14387:1
position: 14387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15527:1
position: 15527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14387-15527:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8175
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15527,aa:TERM)
transl table: 2
product: cytochrome b
translation: MASLRKTHPLLKIANHAVVDLPAPSNISVWWNFGSLLGLCLISQLLTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMGTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGGTLVQWIWGGFSVDNATLTRFFAFHFLLPFVIAAMTMLHLLFLHETGSNNPLGLNSDTDKISFHPYFSYKDLLGFAAVIILLTCLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRSLTFRPVTQFLFWALVANVAILTWIGGMPVEEPYIIIGQVASLTYFSLFLVIIPAAATMENKVLGWQ
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14387..15527
location: region:14387-15527:1
so has part: feature:14387-15527:1:exon

YP_009037624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14387-15527:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Thr
so part of: sequence
location: 15528..15599
location: region:15528-15599:1
so has part: feature:15528-15599:1:region

position:15528:1
position: 15528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15599:1
position: 15599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15528-15599:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8175
product: tRNA-Pro
so part of: sequence
location: complement(15599..15669)
location: region:15599-15669:-1
so has part: feature:15599-15669:-1:region

position:15599:-1
position: 15599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15669:-1
position: 15669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15599-15669:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 8175
note: Control region
so part of: sequence
location: 15670..16652
location: region:15670-16652:1
so has part: feature:15670-16652:1:region

position:15670:1
position: 15670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15670-16652:1:region