Astatotilapia calliptera mitochondrion, complete genome.
type: Entry
definition: Astatotilapia calliptera mitochondrion, complete genome.
sequence version: NC_018560.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_018560.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Astatotilapia calliptera (eastern happy)
organism: Astatotilapia calliptera
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia.
reference: 1
references: 23347464
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to JN628855.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16578
topology: circular
so has quality: SO_0000988
location: 1..16578
location: region:1-16578:1
RO_0002162: 8154

NC_018560
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Mitochondrial genome primers for Lake Malawi cichlids
author: Darrin Hulsey, C.
author: Keck, B.P.
author: Alamillo, H.
author: O'Meara, B.C.
journal: Mol Ecol Resour
volume: 13
issue: 3
pages: 347-353
year: 2013
pubmed: 23347464

23347464
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (10-SEP-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Alamillo, H.
author: O'Meara, B.C.
author: Hulsey, C.D.
journal: Submitted (29-AUG-2011) Ecology and Evolutionary Biology, University of Tennessee, 569 Dabney Hall, Knoxville, TN 37996-1610, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16578:1
position: 16578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16578:1:source
so part of: sequence
organism: Astatotilapia calliptera
organelle: mitochondrion
mol type: genomic DNA

8154
type: Taxonomy
SIO_000068: taxonomy

C339_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt01
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon
subclass of: SO_0000663

79568823
type: Gene
SIO_000068: ncbigene

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

C339_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt01
product: tRNA-Phe
SIO_010081: C339_mgt01
subclass of: SO_0000673
so part of: C339_mgt01
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

C339_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgr02
so part of: sequence
location: 70..1012
location: region:70-1012:1
so has part: feature:70-1012:1:exon
subclass of: SO_0000573

79568809
type: Gene
SIO_000068: ncbigene

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012:1
position: 1012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1012:1:exon

C339_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8154
locus tag: C339_mgr02
product: 12S ribosomal RNA
note: s-rRNA
SIO_010081: C339_mgr02
subclass of: SO_0000673
so part of: C339_mgr02
location: 70..1012
location: region:70-1012:1
so has part: feature:70-1012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70-1012:1:exon

C339_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt02
so part of: sequence
location: 1013..1084
location: region:1013-1084:1
so has part: feature:1013-1084:1:exon
subclass of: SO_0000663

79568810
type: Gene
SIO_000068: ncbigene

position:1013:1
position: 1013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084:1
position: 1084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013-1084:1:exon

C339_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt02
product: tRNA-Val
SIO_010081: C339_mgt02
subclass of: SO_0000673
so part of: C339_mgt02
location: 1013..1084
location: region:1013-1084:1
so has part: feature:1013-1084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1013-1084:1:exon

C339_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgr01
so part of: sequence
location: 1085..2776
location: region:1085-2776:1
so has part: feature:1085-2776:1:exon
subclass of: SO_0000573

79568811
type: Gene
SIO_000068: ncbigene

position:1085:1
position: 1085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776:1
position: 2776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085-2776:1:exon

C339_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8154
locus tag: C339_mgr01
product: 16S ribosomal RNA
note: l-rRNA
SIO_010081: C339_mgr01
subclass of: SO_0000673
so part of: C339_mgr01
location: 1085..2776
location: region:1085-2776:1
so has part: feature:1085-2776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085-2776:1:exon

C339_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt03
so part of: sequence
location: 2777..2850
location: region:2777-2850:1
so has part: feature:2777-2850:1:exon
subclass of: SO_0000663

79568812
type: Gene
SIO_000068: ncbigene

position:2777:1
position: 2777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850:1
position: 2850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2777-2850:1:exon

C339_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt03
product: tRNA-Leu
codon recognized: UUR
SIO_010081: C339_mgt03
subclass of: SO_0000673
so part of: C339_mgt03
location: 2777..2850
location: region:2777-2850:1
so has part: feature:2777-2850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2777-2850:1:exon

C339_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ND1
locus tag: C339_mgp13
so part of: sequence
location: 2851..3825
location: region:2851-3825:1
so has part: feature:2851-3825:1:exon
subclass of: SO_0000010

13540411
type: Gene
SIO_000068: ncbigene

position:2851:1
position: 2851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3825:1
position: 3825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2851-3825:1:exon

C339_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ND1
locus tag: C339_mgp13
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLSTLVSSILNPLILIVFVLLAVALLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFMKEPVRPSTSSPILFLFTPMLALTLALTLWTPMPLPFPMADLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTLQTFSTAQESVWLILPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSATLFLGASVFHTTPEITTTNLMIKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPIALTGLPPQL
SIO_010081: C339_mgp13
subclass of: SO_0000673
so part of: C339_mgp13
location: 2851..3825
location: region:2851-3825:1
so has part: feature:2851-3825:1:exon

YP_006666207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2851-3825:1:exon

C339_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt04
so part of: sequence
location: 3829..3898
location: region:3829-3898:1
so has part: feature:3829-3898:1:exon
subclass of: SO_0000663

79568800
type: Gene
SIO_000068: ncbigene

position:3829:1
position: 3829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3898:1
position: 3898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3829-3898:1:exon

C339_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt04
product: tRNA-Ile
SIO_010081: C339_mgt04
subclass of: SO_0000673
so part of: C339_mgt04
location: 3829..3898
location: region:3829-3898:1
so has part: feature:3829-3898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3829-3898:1:exon

C339_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt05
so part of: sequence
location: complement(3898..3968)
location: region:3898-3968:-1
so has part: feature:3898-3968:-1:exon
subclass of: SO_0000663

79568813
type: Gene
SIO_000068: ncbigene

position:3898:-1
position: 3898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3968:-1
position: 3968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3898-3968:-1:exon

C339_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt05
product: tRNA-Gln
SIO_010081: C339_mgt05
subclass of: SO_0000673
so part of: C339_mgt05
location: complement(3898..3968)
location: region:3898-3968:-1
so has part: feature:3898-3968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3898-3968:-1:exon

C339_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt06
so part of: sequence
location: 3968..4036
location: region:3968-4036:1
so has part: feature:3968-4036:1:exon
subclass of: SO_0000663

79568814
type: Gene
SIO_000068: ncbigene

position:3968:1
position: 3968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4036:1
position: 4036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968-4036:1:exon

C339_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt06
product: tRNA-Met
SIO_010081: C339_mgt06
subclass of: SO_0000673
so part of: C339_mgt06
location: 3968..4036
location: region:3968-4036:1
so has part: feature:3968-4036:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3968-4036:1:exon

C339_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ND2
locus tag: C339_mgp12
so part of: sequence
location: 4037..5082
location: region:4037-5082:1
so has part: feature:4037-5082:1:exon
subclass of: SO_0000010

13540399
type: Gene
SIO_000068: ncbigene

position:4037:1
position: 4037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5082:1
position: 5082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4037-5082:1:exon

C339_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ND2
locus tag: C339_mgp12
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5081..5082,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYILAILLFGLGLGTTITFASTHWLLAWMGLEMNTLAIIPLMAQHHHPRAVEATTKYFLTQATAAATLLFASVTNAWLTGQWEIQQITHPLPSTMITLALALKIGLAPLHAWLPEVLQGLDLTTGLILSTWQKLAPFALILQLQPSSSTLLIILGLTSTLIGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSITLLTLLTYFIMTFSTFLVFKLNEATNINTLATSWAKAPALTALMPLILLSLGGLPPLTGFMPKWLILQELTKQGLAPTATLAALSALLSLYFYLRLSYAMTLTISPNNLTGSTPWRLPSTQLTYPLATSTAMTICLLPLTPAISALLTS
SIO_010081: C339_mgp12
subclass of: SO_0000673
so part of: C339_mgp12
location: 4037..5082
location: region:4037-5082:1
so has part: feature:4037-5082:1:exon

YP_006666208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4037-5082:1:exon

C339_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt07
so part of: sequence
location: 5083..5154
location: region:5083-5154:1
so has part: feature:5083-5154:1:exon
subclass of: SO_0000663

79568801
type: Gene
SIO_000068: ncbigene

position:5083:1
position: 5083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5154:1
position: 5154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5083-5154:1:exon

C339_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt07
product: tRNA-Trp
SIO_010081: C339_mgt07
subclass of: SO_0000673
so part of: C339_mgt07
location: 5083..5154
location: region:5083-5154:1
so has part: feature:5083-5154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5083-5154:1:exon

C339_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt08
so part of: sequence
location: complement(5156..5224)
location: region:5156-5224:-1
so has part: feature:5156-5224:-1:exon
subclass of: SO_0000663

79568815
type: Gene
SIO_000068: ncbigene

position:5156:-1
position: 5156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5224:-1
position: 5224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5156-5224:-1:exon

C339_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt08
product: tRNA-Ala
SIO_010081: C339_mgt08
subclass of: SO_0000673
so part of: C339_mgt08
location: complement(5156..5224)
location: region:5156-5224:-1
so has part: feature:5156-5224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5156-5224:-1:exon

C339_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt09
so part of: sequence
location: complement(5226..5298)
location: region:5226-5298:-1
so has part: feature:5226-5298:-1:exon
subclass of: SO_0000663

79568816
type: Gene
SIO_000068: ncbigene

position:5226:-1
position: 5226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5298:-1
position: 5298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5226-5298:-1:exon

C339_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt09
product: tRNA-Asn
SIO_010081: C339_mgt09
subclass of: SO_0000673
so part of: C339_mgt09
location: complement(5226..5298)
location: region:5226-5298:-1
so has part: feature:5226-5298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5226-5298:-1:exon

C339_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt10
so part of: sequence
location: complement(5334..5400)
location: region:5334-5400:-1
so has part: feature:5334-5400:-1:exon
subclass of: SO_0000663

79568817
type: Gene
SIO_000068: ncbigene

position:5334:-1
position: 5334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5400:-1
position: 5400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5334-5400:-1:exon

C339_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt10
product: tRNA-Cys
SIO_010081: C339_mgt10
subclass of: SO_0000673
so part of: C339_mgt10
location: complement(5334..5400)
location: region:5334-5400:-1
so has part: feature:5334-5400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5334-5400:-1:exon

C339_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt11
so part of: sequence
location: complement(5401..5470)
location: region:5401-5470:-1
so has part: feature:5401-5470:-1:exon
subclass of: SO_0000663

79568818
type: Gene
SIO_000068: ncbigene

position:5401:-1
position: 5401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5470:-1
position: 5470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5401-5470:-1:exon

C339_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt11
product: tRNA-Tyr
SIO_010081: C339_mgt11
subclass of: SO_0000673
so part of: C339_mgt11
location: complement(5401..5470)
location: region:5401-5470:-1
so has part: feature:5401-5470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5401-5470:-1:exon

C339_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: COX1
locus tag: C339_mgp11
so part of: sequence
location: 5472..7064
location: region:5472-7064:1
so has part: feature:5472-7064:1:exon
subclass of: SO_0000010

13540400
type: Gene
SIO_000068: ncbigene

position:5472:1
position: 5472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7064:1
position: 7064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5472-7064:1:exon

C339_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: COX1
locus tag: C339_mgp11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLSGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTIINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIMLHDTYYVVAHFHYVLSMGAVFAIVAGFVHWFPLFSGYTLHDTWTKIHFGVMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTLWNTISSIGSMISLIAVIMFLFIIWEAFAAKREVASVELTATNVEWLHGCPPPYHTFEEPAFVQVQTWSNYEKSASAPSNP
SIO_010081: C339_mgp11
subclass of: SO_0000673
so part of: C339_mgp11
location: 5472..7061
location: region:5472-7061:1
so has part: feature:5472-7061:1:exon

YP_006666209.1
type: Protein
SIO_000068: ncbiprotein

position:7061:1
position: 7061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5472-7061:1:exon

C339_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt12
so part of: sequence
location: complement(7065..7135)
location: region:7065-7135:-1
so has part: feature:7065-7135:-1:exon
subclass of: SO_0000663

79568802
type: Gene
SIO_000068: ncbigene

position:7065:-1
position: 7065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7135:-1
position: 7135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7065-7135:-1:exon

C339_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt12
product: tRNA-Ser
codon recognized: UCN
SIO_010081: C339_mgt12
subclass of: SO_0000673
so part of: C339_mgt12
location: complement(7065..7135)
location: region:7065-7135:-1
so has part: feature:7065-7135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7065-7135:-1:exon

C339_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt13
so part of: sequence
location: 7139..7211
location: region:7139-7211:1
so has part: feature:7139-7211:1:exon
subclass of: SO_0000663

79568819
type: Gene
SIO_000068: ncbigene

position:7139:1
position: 7139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7211:1
position: 7211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7139-7211:1:exon

C339_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt13
product: tRNA-Asp
SIO_010081: C339_mgt13
subclass of: SO_0000673
so part of: C339_mgt13
location: 7139..7211
location: region:7139-7211:1
so has part: feature:7139-7211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7139-7211:1:exon

C339_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: COX2
locus tag: C339_mgp10
so part of: sequence
location: 7214..7904
location: region:7214-7904:1
so has part: feature:7214-7904:1:exon
subclass of: SO_0000010

13540401
type: Gene
SIO_000068: ncbigene

position:7214:1
position: 7214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7904:1
position: 7904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214-7904:1:exon

C339_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: COX2
locus tag: C339_mgp10
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7904,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAASPVMEELLHFHDHALMIVFLISTFVLYIIVAMVTTKLTNKFILDSQEIEIIWTLLPAIILILIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYEDLGFDSYMIPTQDLAPGQFRLLEADHRMVVPVESPIRILISAEDVLHSWAVPSLGVKMDAVPGRLNQTAFIASHPGIFYGQCSEICGANHSFMPIVVEAVPLEHFENWSSLMLEDT
SIO_010081: C339_mgp10
subclass of: SO_0000673
so part of: C339_mgp10
location: 7214..7904
location: region:7214-7904:1
so has part: feature:7214-7904:1:exon

YP_006666210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7214-7904:1:exon

C339_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt14
so part of: sequence
location: 7905..7978
location: region:7905-7978:1
so has part: feature:7905-7978:1:exon
subclass of: SO_0000663

79568803
type: Gene
SIO_000068: ncbigene

position:7905:1
position: 7905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7978:1
position: 7978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7905-7978:1:exon

C339_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt14
product: tRNA-Lys
SIO_010081: C339_mgt14
subclass of: SO_0000673
so part of: C339_mgt14
location: 7905..7978
location: region:7905-7978:1
so has part: feature:7905-7978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7905-7978:1:exon

C339_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ATP8
locus tag: C339_mgp09
so part of: sequence
location: 7980..8147
location: region:7980-8147:1
so has part: feature:7980-8147:1:exon
subclass of: SO_0000010

13540402
type: Gene
SIO_000068: ncbigene

position:7980:1
position: 7980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8147:1
position: 8147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7980-8147:1:exon

C339_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ATP8
locus tag: C339_mgp09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPAPWFAILVFSWLVFLTVIPPKVLAHTFPNDPTLQSTEKPKTEPWSWPWY
SIO_010081: C339_mgp09
subclass of: SO_0000673
so part of: C339_mgp09
location: 7980..8147
location: region:7980-8147:1
so has part: feature:7980-8147:1:exon

YP_006666211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7980-8147:1:exon

C339_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ATP6
locus tag: C339_mgp08
so part of: sequence
location: 8138..8820
location: region:8138-8820:1
so has part: feature:8138-8820:1:exon
subclass of: SO_0000010

13540403
type: Gene
SIO_000068: ncbigene

position:8138:1
position: 8138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8820:1
position: 8820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8138-8820:1:exon

C339_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ATP6
locus tag: C339_mgp08
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8819..8820,aa:TERM)
transl table: 2
product: ATP synthase F0 subunit 6
translation: MMLSFFDQFMSPTYLGIPLIALALSLPWILYPKPTPRWLNNRLITLQGWFINRFTQQIFQPLSLGGHKWAALLASLMLFLITLNMLGLLPYTFTPTTQLSLNMAFAVPLWLATVIIGMRNQPTHALGHLLPEGTPTLLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTAVLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: C339_mgp08
subclass of: SO_0000673
so part of: C339_mgp08
location: 8138..8820
location: region:8138-8820:1
so has part: feature:8138-8820:1:exon

YP_006666212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8138-8820:1:exon

C339_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: COX3
locus tag: C339_mgp07
so part of: sequence
location: 8821..9604
location: region:8821-9604:1
so has part: feature:8821-9604:1:exon
subclass of: SO_0000010

13540404
type: Gene
SIO_000068: ncbigene

position:8821:1
position: 8821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9604:1
position: 9604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8821-9604:1:exon

C339_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: COX3
locus tag: C339_mgp07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9604,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQVHAYHMVDPSPWPLTGAVGALLLTSGLAIWMHFHNMTLLTLGLILLLLTMYQWWRDIVREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPTGITPLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGHRKEAIQSLTLTILLGFYFTFLQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAICLLRQVLYHFTSEHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS
SIO_010081: C339_mgp07
subclass of: SO_0000673
so part of: C339_mgp07
location: 8821..9604
location: region:8821-9604:1
so has part: feature:8821-9604:1:exon

YP_006666213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8821-9604:1:exon

C339_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt15
so part of: sequence
location: 9605..9676
location: region:9605-9676:1
so has part: feature:9605-9676:1:exon
subclass of: SO_0000663

79568804
type: Gene
SIO_000068: ncbigene

position:9605:1
position: 9605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9676:1
position: 9676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9605-9676:1:exon

C339_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt15
product: tRNA-Gly
SIO_010081: C339_mgt15
subclass of: SO_0000673
so part of: C339_mgt15
location: 9605..9676
location: region:9605-9676:1
so has part: feature:9605-9676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9605-9676:1:exon

C339_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ND3
locus tag: C339_mgp06
so part of: sequence
location: 9677..10025
location: region:9677-10025:1
so has part: feature:9677-10025:1:exon
subclass of: SO_0000010

13540405
type: Gene
SIO_000068: ncbigene

position:9677:1
position: 9677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10025:1
position: 10025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9677-10025:1:exon

C339_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ND3
locus tag: C339_mgp06
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10025,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLITTMLIISITLSTILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLSSPLMTFTWAFAVLMLLTLGLIYEWAQGGLEWAE
SIO_010081: C339_mgp06
subclass of: SO_0000673
so part of: C339_mgp06
location: 9677..10025
location: region:9677-10025:1
so has part: feature:9677-10025:1:exon

YP_006666214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9677-10025:1:exon

C339_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt16
so part of: sequence
location: 10026..10094
location: region:10026-10094:1
so has part: feature:10026-10094:1:exon
subclass of: SO_0000663

79568805
type: Gene
SIO_000068: ncbigene

position:10026:1
position: 10026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10094:1
position: 10094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10026-10094:1:exon

C339_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt16
product: tRNA-Arg
SIO_010081: C339_mgt16
subclass of: SO_0000673
so part of: C339_mgt16
location: 10026..10094
location: region:10026-10094:1
so has part: feature:10026-10094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10026-10094:1:exon

C339_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ND4L
locus tag: C339_mgp05
so part of: sequence
location: 10095..10391
location: region:10095-10391:1
so has part: feature:10095-10391:1:exon
subclass of: SO_0000010

13540406
type: Gene
SIO_000068: ncbigene

position:10095:1
position: 10095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10391:1
position: 10391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10095-10391:1:exon

C339_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ND4L
locus tag: C339_mgp05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPTHFAFSSTFLLGLAGLAFHRTHLLSALLCLEGMMLSLFIALSMWTLQLNSANFSASPMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC
SIO_010081: C339_mgp05
subclass of: SO_0000673
so part of: C339_mgp05
location: 10095..10391
location: region:10095-10391:1
so has part: feature:10095-10391:1:exon

YP_006666215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10095-10391:1:exon

C339_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ND4
locus tag: C339_mgp04
so part of: sequence
location: 10385..11765
location: region:10385-11765:1
so has part: feature:10385-11765:1:exon
subclass of: SO_0000010

13540407
type: Gene
SIO_000068: ncbigene

position:10385:1
position: 10385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11765:1
position: 11765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10385-11765:1:exon

C339_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ND4
locus tag: C339_mgp04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11765,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILLPTIMLVPTIWAVPAKHLWSTALSYSLIISLTSLTWLKSSAESGWSFLSPYMATDPLSTPLLALTCWLLPLMILASQNHTTSEPSSRQRTYITLLTSLQIFLIMAFGATEMIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYAPSLQLSSFADKLWWAGCLLAFLVKMPLYGAHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAAGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMMLARGLQMVLPLMTAWWFIASLANLALPPLPNLMGELMIITSLFHWSWWTIALTGAGTLITAGYSLYMFLMTQRGPLPAHIMSLDPTHSREHLLLALHLLPLILLITKPELIWGWTA
SIO_010081: C339_mgp04
subclass of: SO_0000673
so part of: C339_mgp04
location: 10385..11765
location: region:10385-11765:1
so has part: feature:10385-11765:1:exon

YP_006666216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10385-11765:1:exon

C339_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt17
so part of: sequence
location: 11766..11834
location: region:11766-11834:1
so has part: feature:11766-11834:1:exon
subclass of: SO_0000663

79568806
type: Gene
SIO_000068: ncbigene

position:11766:1
position: 11766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11834:1
position: 11834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11766-11834:1:exon

C339_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt17
product: tRNA-His
SIO_010081: C339_mgt17
subclass of: SO_0000673
so part of: C339_mgt17
location: 11766..11834
location: region:11766-11834:1
so has part: feature:11766-11834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11766-11834:1:exon

C339_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt18
so part of: sequence
location: 11835..11901
location: region:11835-11901:1
so has part: feature:11835-11901:1:exon
subclass of: SO_0000663

79568820
type: Gene
SIO_000068: ncbigene

position:11835:1
position: 11835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11901:1
position: 11901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11835-11901:1:exon

C339_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt18
product: tRNA-Ser
codon recognized: AGY
SIO_010081: C339_mgt18
subclass of: SO_0000673
so part of: C339_mgt18
location: 11835..11901
location: region:11835-11901:1
so has part: feature:11835-11901:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11835-11901:1:exon

C339_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt19
so part of: sequence
location: 11906..11978
location: region:11906-11978:1
so has part: feature:11906-11978:1:exon
subclass of: SO_0000663

79568821
type: Gene
SIO_000068: ncbigene

position:11906:1
position: 11906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11978:1
position: 11978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11906-11978:1:exon

C339_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt19
product: tRNA-Leu
codon recognized: CUN
SIO_010081: C339_mgt19
subclass of: SO_0000673
so part of: C339_mgt19
location: 11906..11978
location: region:11906-11978:1
so has part: feature:11906-11978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11906-11978:1:exon

C339_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ND5
locus tag: C339_mgp03
so part of: sequence
location: 11979..13817
location: region:11979-13817:1
so has part: feature:11979-13817:1:exon
subclass of: SO_0000010

13540408
type: Gene
SIO_000068: ncbigene

position:11979:1
position: 11979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13817:1
position: 13817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11979-13817:1:exon

C339_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ND5
locus tag: C339_mgp03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MHLTSTMMTTSLILIFLLLMSPILSSFSPTPLPPNWALTQVKTAVKWAFFTSILPLCLFLNEGTETIITSWTWMNTHTFDINVSLKFDIYSIIFTPVALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVVYNRVGDIGLIFAMAWIATSLNSWEMQQMFTLSKDFDLTYPLIGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRMSPMLENNQTALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGMHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSYLNAWALSLTLLATSFTAIYSLRVIFFVSMGHPRFNPLSPINENNSTVINPIKRLAWGSIIAGLLITSNITPLKTPVMSMPFLLKVAALMVTIIGLLTALELASLTNKQYKPTPNLSPHHFSNMLGFFPMVIHRLIPKLNLILGQTIASQTVDQTWLEKMGPKATATLNLPLITTTNNIQQGMIKTYLSLFFFTFGLALLLLLY
SIO_010081: C339_mgp03
subclass of: SO_0000673
so part of: C339_mgp03
location: 11979..13817
location: region:11979-13817:1
so has part: feature:11979-13817:1:exon

YP_006666217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11979-13817:1:exon

C339_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: ND6
locus tag: C339_mgp02
so part of: sequence
location: complement(13814..14335)
location: region:13814-14335:-1
so has part: feature:13814-14335:-1:exon
subclass of: SO_0000010

13540409
type: Gene
SIO_000068: ncbigene

position:13814:-1
position: 13814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14335:-1
position: 14335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13814-14335:-1:exon

C339_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: ND6
locus tag: C339_mgp02
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MVYIMFMFLLGLVMGLAAVASNPSPYFAALGLVAVAGMGCGVLVGHGGSFLSLILFLIYLGGMLVVFAYSAALAAEPYPEGWGSWPVLGVMVAYLLGVGMAAVLFWGGWYEGAWVSADEFVEFSVFRGDVGGVALMYSMGGGVLVMGAWVLLLTLFVVLELTRGLSRGALRAV
SIO_010081: C339_mgp02
subclass of: SO_0000673
so part of: C339_mgp02
location: complement(13814..14335)
location: region:13814-14335:-1
so has part: feature:13814-14335:-1:exon

YP_006666218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13814-14335:-1:exon

C339_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt20
so part of: sequence
location: complement(14336..14404)
location: region:14336-14404:-1
so has part: feature:14336-14404:-1:exon
subclass of: SO_0000663

79568807
type: Gene
SIO_000068: ncbigene

position:14336:-1
position: 14336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14404:-1
position: 14404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14336-14404:-1:exon

C339_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt20
product: tRNA-Glu
SIO_010081: C339_mgt20
subclass of: SO_0000673
so part of: C339_mgt20
location: complement(14336..14404)
location: region:14336-14404:-1
so has part: feature:14336-14404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14336-14404:-1:exon

C339_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
gene: CYTB
locus tag: C339_mgp01
so part of: sequence
location: 14409..15549
location: region:14409-15549:1
so has part: feature:14409-15549:1:exon
subclass of: SO_0000010

13540410
type: Gene
SIO_000068: ncbigene

position:14409:1
position: 14409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15549:1
position: 15549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14409-15549:1:exon

C339_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8154
gene: CYTB
locus tag: C339_mgp01
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15549,aa:TERM)
transl table: 2
product: cytochrome b
translation: MANLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSIAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAVLLIALISLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWLLVADVAILTWIGGMPVEHPFVIIGQIASFLYFFLFLVLAPLAGWLENKILEWS
SIO_010081: C339_mgp01
subclass of: SO_0000673
so part of: C339_mgp01
location: 14409..15549
location: region:14409-15549:1
so has part: feature:14409-15549:1:exon

YP_006666219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14409-15549:1:exon

C339_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt21
so part of: sequence
location: 15550..15621
location: region:15550-15621:1
so has part: feature:15550-15621:1:exon
subclass of: SO_0000663

79568808
type: Gene
SIO_000068: ncbigene

position:15550:1
position: 15550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15621:1
position: 15621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15550-15621:1:exon

C339_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt21
product: tRNA-Thr
SIO_010081: C339_mgt21
subclass of: SO_0000673
so part of: C339_mgt21
location: 15550..15621
location: region:15550-15621:1
so has part: feature:15550-15621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15550-15621:1:exon

C339_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 8154
locus tag: C339_mgt22
so part of: sequence
location: complement(15622..15691)
location: region:15622-15691:-1
so has part: feature:15622-15691:-1:exon
subclass of: SO_0000663

79568822
type: Gene
SIO_000068: ncbigene

position:15622:-1
position: 15622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15691:-1
position: 15691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15622-15691:-1:exon

C339_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8154
locus tag: C339_mgt22
product: tRNA-Pro
SIO_010081: C339_mgt22
subclass of: SO_0000673
so part of: C339_mgt22
location: complement(15622..15691)
location: region:15622-15691:-1
so has part: feature:15622-15691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15622-15691:-1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 8154
note: control region
so part of: sequence
location: 15692..16578
location: region:15692-16578:1
so has part: feature:15692-16578:1:region

position:15692:1
position: 15692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15692-16578:1:region