Acidovorax temperans strain LMJ plasmid pJG1, complete sequence.
type: Entry
definition: Acidovorax temperans strain LMJ plasmid pJG1, complete sequence.
sequence version: NZ_CP117195.1
sequence date: 2023-02-15
sequence: sequence
division: CON
label: NZ_CP117195.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN33025486
keyword: RefSeq
source: Acidovorax temperans
organism: Acidovorax temperans
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP117195.1.\nBacteria and source DNA available from Dr. Mautusi Mitra Professor,\nUniversity of West Georgia; Department of Natural Sciences, Biology\nBuilding,1601 Maple Street, Carrollton, GA 30118, USA.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2022\nAssembly Method :: HGAP v. 4.0; FLYE v. 2.9.1\nAssembly Name :: UWG_Atem_1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 2535.72x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/12/2023 18:13:56\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,461\nCDSs (total) :: 4,396\nGenes (coding) :: 4,236\nCDSs (with protein) :: 4,236\nGenes (RNA) :: 65\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 160\nCDSs (without protein) :: 160\nPseudo Genes (ambiguous residues) :: 0 of 160\nPseudo Genes (frameshifted) :: 45 of 160\nPseudo Genes (incomplete) :: 116 of 160\nPseudo Genes (internal stop) :: 22 of 160\nPseudo Genes (multiple problems) :: 22 of 160\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 32883
topology: circular
so has quality: SO_0000988
location: 1..32883
location: region:1-32883:1
RO_0002162: 80878

NZ_CP117195
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN33025486
type: BioSample
SIO_000068: biosample

1
title: De novo assembly of the genome of a novel bacterial strain: Acidovorax temperans strain LMJ
author: Mitra, M.
author: Stanescu, A.
journal: Unpublished

2
title: Direct Submission
author: Mitra, M.
author: Stanescu, A.
journal: Submitted (02-FEB-2023) Department of Natural Sciences, University of West Georgia, 1601 Maple street, Carrollton, GA 30118, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32883:1
position: 32883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32883:1:source
so part of: sequence
organism: Acidovorax temperans
mol type: genomic DNA
strain: LMJ
isolation source: Acidovorax temperans strain LMJ was isolated from a contaminated Tris Acetate Phosphate (TAP) medium culture plate of the green micro-alga Chlamydomonas reinhardtii strain, LMJ.SG0182 (a Chlamydomonas Library project (CLiP) strain)
plasmid: pJG1
country: USA:Georgia
lat lon: 33.5730 N 85.1037 W
altitude: 336 m
collection date: 2018-08
collected by: Mautusi Mitra
identified by: Mautusi Mitra

80878
type: Taxonomy
SIO_000068: taxonomy

PQV96_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22135
old locus tag: PQV96_22135
so part of: sequence
location: 1..2916
location: region:1-2916:1
so has part: feature:1-2916:1:exon
subclass of: SO_0000010

position:2916:1
position: 2916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-2916:1:exon

PQV96_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22135
old locus tag: PQV96_22135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558120.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element IS1071 family transposase
translation: MQGWHTTFLGMRGLPRDISDFEMKAFFTFDGAERDAINARRGDSHKLGLALHIGFLRMSGRLLGAFRVIPVALWRHLGNELGIAAPEVASLRAMYERGRTLFDHQQVACTVLGFQWMSEHQRRSLVRELRDEVARCADRDQLLVRARQWLYKNKLVIVHERAIRTLIAAALAQLEVETGTAIAASVDPATLDRWRASVSELRPDGQTQQSWLWAAPAKHSTRQISEVLERIDLLYTLDVHKHLADIPDLILRRYARRLVSRPPSAGAKIKEPARTVEVACFLRYCLFTTTDQLILMVQRRIADLWRQAAADVPATVNWAAMYKTLLGELVALSAQGAVPDAELRARLEALITETQKRKPPSRASLVREGLIDGIRPVRSLLVAIAKLPWQATGEHPAIEYLAKLQALYLKGSRKLPVEVVAPSLGMIWQVSISSPDRERAFQALEVATLFALRRAVRNGSVWIEHSLSFRGRARLFFTDERWQAESKKHYARLSLPSKAATFLKPLLARVTAGVDAVAAAARSGVLRVDDELHLSPLPAEDEDPEVTKLRAALDHRIGEVQLPEVILAVDAQVRFSWIMLGREPRSTDELLMVYAGIMAHGTSLTAVECARMIPQLSATSIRQAMRWARDERRLSQACQAVLEFMQRHPIAATWGRSDLASSDMMSMETTKRVWQARLDPRRNTPSIGIYSHVKDRWGIFHAQPFVLNERQAGVAIEGVIRQEKLETSQLAVDTHGYTDFAMSHARLLGFDLCPRLKELKQRHLFVPRGTKVPAEIAAVCEANVDVALIEKHWDSLVHLAASVMSGHASAVAALARFGSAAQGDPIYEAGVQLGRLLRTAFLADYFVKDAFRNELRRVLNRGEAVNALKRAIYTGRISPAQAKRVDEMQAVADALSLMANIVMAWNTSQMQAVLDRWSNRRQVIPPELIGKIAPTRLESINLRGVFRFPVDRYADQILPSRPNASITGTNG
SIO_010081: PQV96_RS22135
subclass of: SO_0000673
so part of: PQV96_RS22135
location: 1..2916
location: region:1-2916:1
so has part: feature:1-2916:1:exon

WP_003049965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-2916:1:exon

PQV96_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22140
old locus tag: PQV96_22140
so part of: sequence
location: complement(3321..3674)
location: region:3321-3674:-1
so has part: feature:3321-3674:-1:exon
subclass of: SO_0000010

position:3321:-1
position: 3321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3674:-1
position: 3674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3321-3674:-1:exon

PQV96_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22140
old locus tag: PQV96_22140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124620.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARRSFDDETLAWVREMPLSQVLDKLRDDGQLFWRRDLDFVPEKDKRTVRLFLSSPSGFAWEVLVTGLKWFDVRAGKGGGGGIDLVMHLLGIDFVKAVKLLSSGAGVAGQRRPVRPQ
SIO_010081: PQV96_RS22140
subclass of: SO_0000673
so part of: PQV96_RS22140
location: complement(3321..3674)
location: region:3321-3674:-1
so has part: feature:3321-3674:-1:exon

WP_125958918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3321-3674:-1:exon

PQV96_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22145
old locus tag: PQV96_22145
so part of: sequence
location: complement(3884..5104)
location: region:3884-5104:-1
so has part: feature:3884-5104:-1:exon
subclass of: SO_0000010

position:3884:-1
position: 3884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5104:-1
position: 5104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3884-5104:-1:exon

PQV96_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22145
old locus tag: PQV96_22145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MAGTTAQKLDNQTADRFFQSGTALNRVLTEAPYLPRCSDDKTATRVRPREYAIRYPYMQVNRPGFVSWLIFDLDHAKAMIWEDAGLPAPNLIVRNRQSGHSHLYYAIPPVCTTEAARSKPIAYMKAVYEAFAARLDADTDFHSGPVAKTPGHPWWLTHELHAHVYELGELADYVDLAVSSPWGKGPQFDEVSHSRHCILFEHLRHYAYSIVNRERERGSFATFTRLLEAYAHNRNSFQKLGFMDNLAQSSLKATVKSVARWTWDRYTGCGRCHRGVMQLDKDLPLIERQRLAAARTHDVRHKTTESKVRAACRLLQQKGEALTQAAIGRVAGLTRQTVATYKHVLEEVLKPVAVAILGVTSGKAEDVKHGAHQVTAAPQGAGVPVSASVSLELFPAGPGVVPVLDG
SIO_010081: PQV96_RS22145
subclass of: SO_0000673
so part of: PQV96_RS22145
location: complement(3884..5104)
location: region:3884-5104:-1
so has part: feature:3884-5104:-1:exon

WP_142085874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3884-5104:-1:exon

PQV96_RS22150
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22150
old locus tag: PQV96_22150
so part of: sequence
location: complement(5352..5663)
location: region:5352-5663:-1
so has part: feature:5352-5663:-1:exon
subclass of: SO_0000010

position:5352:-1
position: 5352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5663:-1
position: 5663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5352-5663:-1:exon

PQV96_RS22150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22150
old locus tag: PQV96_22150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018413498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParC family partition-associated protein
translation: MLTTTASVVAPKVLKELIAAGSVSAARVEPGDKGLLIVVRAGMNERVLGAARGGLRYFQSLDGAASVLQSYGIMKFDVNTEHWVPKTMVRGYKQAPASVDADE
SIO_010081: PQV96_RS22150
subclass of: SO_0000673
so part of: PQV96_RS22150
location: complement(5352..5663)
location: region:5352-5663:-1
so has part: feature:5352-5663:-1:exon

WP_013124618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5352-5663:-1:exon

PQV96_RS22155
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22155
old locus tag: PQV96_22155
so part of: sequence
location: complement(5811..6134)
location: region:5811-6134:-1
so has part: feature:5811-6134:-1:exon
subclass of: SO_0000010

position:5811:-1
position: 5811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6134:-1
position: 6134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5811-6134:-1:exon

PQV96_RS22155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22155
old locus tag: PQV96_22155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSMKGKPNTAQFKPPKDPTAFLEGGEADKAEKPLVAPAAVTTPPAATPPAAEETQRYGRARVQKIFNFPEELADRLRREALKRSEEKGGRVTEKDIVIEALEAFLKG
SIO_010081: PQV96_RS22155
subclass of: SO_0000673
so part of: PQV96_RS22155
location: complement(5811..6134)
location: region:5811-6134:-1
so has part: feature:5811-6134:-1:exon

WP_105224163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5811-6134:-1:exon

PQV96_RS22160
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22160
old locus tag: PQV96_22160
so part of: sequence
location: complement(6131..6757)
location: region:6131-6757:-1
so has part: feature:6131-6757:-1:exon
subclass of: SO_0000010

position:6131:-1
position: 6131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6757:-1
position: 6757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6131-6757:-1:exon

PQV96_RS22160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22160
old locus tag: PQV96_22160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIFACVNTKGGVGKTTTAVHLAVMLARQGKTLLIDGDPQASAASWAAWRRETQYDPSPTTTCLAGKAILAEGKQLASGFEHVVVDAGGRDSVGLRSALLLAQRAVIPIGASNLDAAAMTDLLEVVELARDYNPELDVRVLLTRVDPRTKDAAEMLEFLAEQKLTVLPTKVCERVAFRRAIGEGASVQELGRDQAAIAEMEAFFKEVMA
SIO_010081: PQV96_RS22160
subclass of: SO_0000673
so part of: PQV96_RS22160
location: complement(6131..6757)
location: region:6131-6757:-1
so has part: feature:6131-6757:-1:exon

WP_013124616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6131-6757:-1:exon

PQV96_RS22165
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22165
old locus tag: PQV96_22165
so part of: sequence
location: 6955..7509
location: region:6955-7509:1
so has part: feature:6955-7509:1:exon
subclass of: SO_0000010

position:6955:1
position: 6955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7509:1
position: 7509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6955-7509:1:exon

PQV96_RS22165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22165
old locus tag: PQV96_22165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQFKTVRHRDQDGNYHEGKTVQCLRRVREVTPDFPEGKNVQRVVAKFDRAARELPAEVAAVLTPAEQDEWKEWRVKQDEEHLKSVAQYELDTLAERLGVIRTGIQKGYAATDTKNAVAIRNGTRAVLRLLADLMPEPVKGRPVIEEEYEPLMLPNFATPGTPEFDSYQRLLEEHERRKAQDQGG
SIO_010081: PQV96_RS22165
subclass of: SO_0000673
so part of: PQV96_RS22165
location: 6955..7509
location: region:6955-7509:1
so has part: feature:6955-7509:1:exon

WP_018413496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6955-7509:1:exon

PQV96_RS22170
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22170
old locus tag: PQV96_22170
so part of: sequence
location: 7511..7714
location: region:7511-7714:1
so has part: feature:7511-7714:1:exon
subclass of: SO_0000010

position:7511:1
position: 7511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7714:1
position: 7714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7511-7714:1:exon

PQV96_RS22170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22170
old locus tag: PQV96_22170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018413495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFWTFDPNTCRFERASKQAALHAADVAVVNDDTDVQVISDHQPPKRWPSGEPLVVAGVEFERELFE
SIO_010081: PQV96_RS22170
subclass of: SO_0000673
so part of: PQV96_RS22170
location: 7511..7714
location: region:7511-7714:1
so has part: feature:7511-7714:1:exon

WP_013124614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7511-7714:1:exon

PQV96_RS22175
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22175
old locus tag: PQV96_22175
so part of: sequence
location: 7747..8316
location: region:7747-8316:1
so has part: feature:7747-8316:1:exon
subclass of: SO_0000010

position:7747:1
position: 7747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8316:1
position: 8316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7747-8316:1:exon

PQV96_RS22175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22175
old locus tag: PQV96_22175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124613.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IA family hydrolase
translation: MKPTRAIVFDAFGTLIRYTTRPAPYGHLVDAAGRPVDRIACLTRDVPLATLASEIGVGDKLDVILPDLAEELSGLRLFPEVPDVLAKARAAGLRLAVCSNLAYEYGPAVRGLVPELDAYVLSYEVGVAKPHPTMYRLACAELGCAPAETVFVGDSKRCDFDGPQAFGMQARWLDRRGGQSLVDALKGFV
SIO_010081: PQV96_RS22175
subclass of: SO_0000673
so part of: PQV96_RS22175
location: 7747..8316
location: region:7747-8316:1
so has part: feature:7747-8316:1:exon

WP_142085876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7747-8316:1:exon

PQV96_RS22180
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22180
old locus tag: PQV96_22180
so part of: sequence
location: 8543..9070
location: region:8543-9070:1
so has part: feature:8543-9070:1:exon
subclass of: SO_0000010

position:8543:1
position: 8543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9070:1
position: 9070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8543-9070:1:exon

PQV96_RS22180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22180
old locus tag: PQV96_22180
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014616787.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MLVIDLEATCDDGDGLPASDMEIIEIGAVWATVEGSVLDTFQALVRPVARPQLTPFCRQLTNIQQADVDGAELFPAVAARLASFAQRHQAPGATWGSWGQFDAKQLSRDCERHGIQNPLAAFEHVNLKRRFAKARKIKEVGMARALQMVGLSLDGAHHRGLDDARNIAKLLPWSL
SIO_010081: PQV96_RS22180
subclass of: SO_0000673
so part of: PQV96_RS22180
location: 8543..9070
location: region:8543-9070:1
so has part: feature:8543-9070:1:exon

WP_142085896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8543-9070:1:exon

PQV96_RS22185
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22185
old locus tag: PQV96_22185
so part of: sequence
location: 9195..9476
location: region:9195-9476:1
so has part: feature:9195-9476:1:exon
subclass of: SO_0000010

position:9195:1
position: 9195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9476:1
position: 9476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9195-9476:1:exon

PQV96_RS22185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22185
old locus tag: PQV96_22185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017452571.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAATTTMVHVRVDENVKAQAAETLASMGLTVSDAIRVFLTRVVADKELPFALKAPNATSRVAIAEANEIIKSRRARFATADALLNDLEEASRK
SIO_010081: PQV96_RS22185
subclass of: SO_0000673
so part of: PQV96_RS22185
location: 9195..9476
location: region:9195-9476:1
so has part: feature:9195-9476:1:exon

WP_013124611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9195-9476:1:exon

PQV96_RS22190
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22190
old locus tag: PQV96_22190
so part of: sequence
location: 9448..9777
location: region:9448-9777:1
so has part: feature:9448-9777:1:exon
subclass of: SO_0000010

position:9448:1
position: 9448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9777:1
position: 9777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9448-9777:1:exon

PQV96_RS22190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22190
old locus tag: PQV96_22190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124610.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MTSKKPAASKRANLPRASDYTKDFLKDWQRLSHSGRYDMNRLKEAMTLLIANDGPLPPEWLDHALTGDWAGHRECHVGGDFLLIYTLDDSGKSGLVVFVRSGTHSELFS
SIO_010081: PQV96_RS22190
subclass of: SO_0000673
so part of: PQV96_RS22190
location: 9448..9777
location: region:9448-9777:1
so has part: feature:9448-9777:1:exon

WP_013124610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9448-9777:1:exon

PQV96_RS22195
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
gene: cadR
locus tag: PQV96_RS22195
old locus tag: PQV96_22195
so part of: sequence
location: complement(10034..10453)
location: region:10034-10453:-1
so has part: feature:10034-10453:-1:exon
subclass of: SO_0000010

position:10034:-1
position: 10034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10453:-1
position: 10453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10034-10453:-1:exon

PQV96_RS22195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
gene: cadR
locus tag: PQV96_RS22195
old locus tag: PQV96_22195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124607.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cd(II)/Pb(II)-responsive transcriptional regulator
translation: MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYSDVHIERLQFIRHCRSLDMTLSEIRILLGLRDNPAQDCGDVNALLDAHIRQTEERVEALLQLKRHLLSLREKCSGARRIEACGILQGLSDCDHPGCNA
SIO_010081: PQV96_RS22195
subclass of: SO_0000673
so part of: PQV96_RS22195
location: complement(10034..10453)
location: region:10034-10453:-1
so has part: feature:10034-10453:-1:exon

WP_115465919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10034-10453:-1:exon

PQV96_RS22200
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22200
old locus tag: PQV96_22200
so part of: sequence
location: 10539..12944
location: region:10539-12944:1
so has part: feature:10539-12944:1:exon
subclass of: SO_0000010

position:10539:1
position: 10539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12944:1
position: 12944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10539-12944:1:exon

PQV96_RS22200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22200
old locus tag: PQV96_22200
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008434970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MSECASKGCGCTTEPIIQPTAPAPLATGSAQAVYRIENMDCPTEEALIRSKLAGLAGVVGLEFNLMQRTLAVRHELPSLSPVEQALKAIGMQAVRMDQASAGQTTKLSIAKMDCPTEEALIRNKLGTVAGVADLDFNLMQRTLSVRHADGVLPDVLVALQALGFEAQVVDTAEVASPSAAPVTTPTNWWPLGISLVTASAAEAVYWFHDGNHWSVVVLALVAVFTGGLSTYKKGWIALKNRNLNMNALMSIAVTGAMLIGHWPEAAMVMVLFALAEVIEAKSLDRARNAIRGLLDLTPEQATVQQPDGTWREVSAKQIAIGSRVRVKPGERIALDGEVLDGRSTVNQAPITGESLPVEKSPGDPVFAGTINESGSFEYRVTALANNSTLARIIHAVEAAQGSRAPTQRFVDQFARWYTPVVFGVAIAVALLPPLFMGAAWLDWIYRALVLLVVACPCALVISTPVSIVSGLAAAARHGILIKGGVYLEEGRKLRWLALDKTGTITHGKPAQTDFVTWGNALASDSRSIAASLAARSDHPVSKAVAQAAQTDGVALLDVAEFNALPGRGVQGQIDGETYHLGNHRMLEELGQCTPELEQRIAALETAGKTVVMLVGAKGVHALFAVADTIKDSSRTAIAELHALGINTMMLTGDNPHTAQAIAAQAGIDRAQGNLLPDDKLREVEQLARSGKVGMVGDGINDAPALARADIGFAMGAAGTDTAIETADVALMDDDLRKIPTFVRLSRATAQVLMQNIVLALGIKAVFLVLTFTGHATMWMAVFADMGASLLVVGNGLRLLRR
SIO_010081: PQV96_RS22200
subclass of: SO_0000673
so part of: PQV96_RS22200
location: 10539..12944
location: region:10539-12944:1
so has part: feature:10539-12944:1:exon

WP_066697645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10539-12944:1:exon

PQV96_RS22205
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
gene: lspA
locus tag: PQV96_RS22205
old locus tag: PQV96_22205
so part of: sequence
location: 12941..14032
location: region:12941-14032:1
so has part: feature:12941-14032:1:exon
subclass of: SO_0000010

position:12941:1
position: 12941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14032:1
position: 14032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12941-14032:1:exon

PQV96_RS22205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
gene: lspA
locus tag: PQV96_RS22205
old locus tag: PQV96_22205
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124605.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MSWKFFLYDWGGLNIAMFQAINTGTPAALGPLAWFFSLVGSYWTAPLMLLGLWWWSKSATNPTHGRAVRHRLIGFSAAFLLALLAATILKLWLDFPRPPAVLGDMVRVIGDIELHYSLPSGHATYAALVVGALWPLIGRRGRIGLVLYAALVGWSRIAAGMHFPADVLAGWVLGLSCTALAGWLMPLAVPVWQSARRTSTWVWFAVAASAVMTDQLAKFAITRTFAYGEQVEVTPFFNFVHVLNPGAAFSFLANAGGWQRYFFITLGLVVSAWLGRMLCQQRPRLEAVGYSLILGGALGNVADRVLRGSVVDFLDFHWQLVHWPAFNLADVAITSGAALLIMQMLTQGKAVDTGANENYNHSQ
SIO_010081: PQV96_RS22205
subclass of: SO_0000673
so part of: PQV96_RS22205
location: 12941..14032
location: region:12941-14032:1
so has part: feature:12941-14032:1:exon

WP_142085880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12941-14032:1:exon

PQV96_RS22210
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22210
old locus tag: PQV96_22210
so part of: sequence
location: 14081..15997
location: region:14081-15997:1
so has part: feature:14081-15997:1:exon
subclass of: SO_0000010

position:14081:1
position: 14081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15997:1
position: 15997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14081-15997:1:exon

PQV96_RS22210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22210
old locus tag: PQV96_22210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020423964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c/FTR1 family iron permease
translation: MTLLLATCALIGGPNYAAETTELKAKQIWQLLDYVAVDYGGAVANGAVLKASEYAEMQEFAATAERQLGELPDQTDKGSLLQQATALRAAVAAKADPVSVAKLAHALSSAVQKTYPFPVAPTAMPVLAKGGQLFQAQCAACHGQQGRGDGPLAASLNPKPTALADHTRARERSLFALHQIISNGVQGTAMQGFGALSDEDRWALAFFVGTLPYAQSDKDEGAKLWQANAQVRQTVASLDALTQTSEHVLADKLDVPSAKALTAYLRTNPNALNVNSPKGTAIAKAKLSESVTALLAGDRAGATKLALSAYLDGFEPVEPALATRNRPLFEKIEAAMVSYRALIANGSPADVQTAELHLRGLLDEADKVLAPSDDDAVAAFIGALTILLREGLEALLVVVAMLAFLKKAERKDVLIYVHAGWASALAAGGITWAVATYLVGVSGASRELTEGFSSLFAAVVLLGVGMWMHQKSVAGRWQVYLKEKLSSALNKRTAWFLFSLAFVAVYREVFETVLFFAALWTEGNGWPLLAGLGTGMGILALLAVVLLRTSARLPIGQFFAASSLLVAILAVVLAGKGIAGLQEAGLLQTSPISIPRIDLLGIYPSWQTLSAQFAVLFIVVVAFTINLRSSRQMAVQKS
SIO_010081: PQV96_RS22210
subclass of: SO_0000673
so part of: PQV96_RS22210
location: 14081..15997
location: region:14081-15997:1
so has part: feature:14081-15997:1:exon

WP_207374958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14081-15997:1:exon

PQV96_RS22215
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22215
old locus tag: PQV96_22215
so part of: sequence
location: complement(16077..16691)
location: region:16077-16691:-1
so has part: feature:16077-16691:-1:exon
subclass of: SO_0000010

position:16077:-1
position: 16077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16691:-1
position: 16691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16077-16691:-1:exon

PQV96_RS22215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22215
old locus tag: PQV96_22215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYMRVSKADGSQATDLQRDALIAAGVDPAQLYEDQASGKREDRPGLASCLKALRSGDTLVVWKLDRLGRDLRHLINTVHDLTGRGVGLKVLTGHGAAIDTTTAAGKLVFGIFAALAEFERELIAERTVAGLASARARGRKGGRPFKMTAAKLRLAMAAMGQTETKVGDLCQEFGITRQTLYRHISPKGELRADGIRLLSKV
SIO_010081: PQV96_RS22215
subclass of: SO_0000673
so part of: PQV96_RS22215
location: complement(16077..16691)
location: region:16077-16691:-1
so has part: feature:16077-16691:-1:exon

WP_142085883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16077-16691:-1:exon

PQV96_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22220
old locus tag: PQV96_22220
so part of: sequence
location: complement(16752..17969)
location: region:16752-17969:-1
so has part: feature:16752-17969:-1:exon
subclass of: SO_0000010

position:16752:-1
position: 16752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17969:-1
position: 17969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16752-17969:-1:exon

PQV96_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22220
old locus tag: PQV96_22220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011517528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TniQ family protein
translation: MKPAPRWPLHPAPKEGEALSSWLNRVAVCYQMDMFDLLEHDLGHDQIDDLDTAPPVALLTALSRRSGIELDQLRCMSFAGWVPWLLDSLDDRVPSALETYAFQFSVMLPKRNRKTRSVTSWRAWLPSQPIRRACPLCLSDSANQAVLLAWKLPLMLSCPLHGCWLESYWGMPGRVLGWEKADAAPRMASDAIAAMDRRTWQALTAGYVELPRRPVHAGLWFRLLRTLLDELNTPLSHCGTCAGSIRYVWERCGHPLRAGQSLWHPYEILDSSVQLQILEAAATAIDLIESKVLSPRGELATLFLSEPQTEFTNGLRAVERKKEPVNHWQQAVKAINDAIVEARHDSEIARSLFAMASFGQRDPESLERLRVTFTKEGIPPEFLSHYEPDGPFTCRRLNNGLGDKF
SIO_010081: PQV96_RS22220
subclass of: SO_0000673
so part of: PQV96_RS22220
location: complement(16752..17969)
location: region:16752-17969:-1
so has part: feature:16752-17969:-1:exon

WP_142085885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16752-17969:-1:exon

PQV96_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22225
old locus tag: PQV96_22225
pseudo: true
so part of: sequence
location: complement(17966..>18325)
location: region:17966-18325:-1
so has part: feature:17966-18325:-1:exon
subclass of: SO_0000010

position:17966:-1
position: 17966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18325:-1
position: 18325
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17966-18325:-1:exon

PQV96_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22225
old locus tag: PQV96_22225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003155746.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TniB family NTP-binding protein
SIO_010081: PQV96_RS22225
subclass of: SO_0000673
so part of: PQV96_RS22225
location: complement(17966..>18325)
location: region:17966-18325:-1
so has part: feature:17966-18325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17966-18325:-1:exon

PQV96_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22230
old locus tag: PQV96_22230
so part of: sequence
location: complement(18650..19705)
location: region:18650-19705:-1
so has part: feature:18650-19705:-1:exon
subclass of: SO_0000010

position:18650:-1
position: 18650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19705:-1
position: 19705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18650-19705:-1:exon

PQV96_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22230
old locus tag: PQV96_22230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611258.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MDATTVGVDLAKNVFVACVADCAGRIVARREFNRAGFLTWLGTLPAGTVIGMEACGSAHHWGRTAQRLGLAPRLMAAEFVRPYRKRQSVKHDRADAEAILIALRSPGMRFIPVKTEAQQQRLAWHSLRIGWVEERTALLNRIRGLLAEFGLIVDPGPRHLRAQLAEREFDTALSPALRGLIQSVRDQLDALDARIGECDRQITAQQADDPLAKRARDLPGVGLITADAVTASVGDASMFKNGRQFAAWLGLTPSQSGSGGKTKLGRITRRGDDYLRTLLVQGARSVLAATMRKQRRESPEKLTRLQQWIVALSGRIGYHKTLIAIANKHARQLWAVLAKGEAYNPQAWQRA
SIO_010081: PQV96_RS22230
subclass of: SO_0000673
so part of: PQV96_RS22230
location: complement(18650..19705)
location: region:18650-19705:-1
so has part: feature:18650-19705:-1:exon

WP_142085887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18650-19705:-1:exon

PQV96_RS22235
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22235
old locus tag: PQV96_22235
pseudo: true
so part of: sequence
location: complement(<19815..20363)
location: region:19815-20363:-1
so has part: feature:19815-20363:-1:exon
subclass of: SO_0000010

position:19815:-1
position: 19815
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:20363:-1
position: 20363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19815-20363:-1:exon

PQV96_RS22235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22235
old locus tag: PQV96_22235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003155746.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TniB family NTP-binding protein
SIO_010081: PQV96_RS22235
subclass of: SO_0000673
so part of: PQV96_RS22235
location: complement(<19815..20363)
location: region:19815-20363:-1
so has part: feature:19815-20363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19815-20363:-1:exon

PQV96_RS22240
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22240
old locus tag: PQV96_22240
so part of: sequence
location: complement(20366..22045)
location: region:20366-22045:-1
so has part: feature:20366-22045:-1:exon
subclass of: SO_0000010

position:20366:-1
position: 20366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22045:-1
position: 22045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20366-22045:-1:exon

PQV96_RS22240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22240
old locus tag: PQV96_22240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124600.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADALKPWIARRERWPSFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMIGQMREIVTSAQKATRKARRDADRRQHLKTSARPDKPVPPDTDIADPQADNLPPAKPFDQIEEW
SIO_010081: PQV96_RS22240
subclass of: SO_0000673
so part of: PQV96_RS22240
location: complement(20366..22045)
location: region:20366-22045:-1
so has part: feature:20366-22045:-1:exon

WP_000179844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20366-22045:-1:exon

PQV96_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22245
old locus tag: PQV96_22245
pseudo: true
so part of: sequence
location: complement(22120..>22191)
location: region:22120-22191:-1
so has part: feature:22120-22191:-1:exon
subclass of: SO_0000010

position:22120:-1
position: 22120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22191:-1
position: 22191
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22120-22191:-1:exon

PQV96_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22245
old locus tag: PQV96_22245
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: EAL domain-containing protein
SIO_010081: PQV96_RS22245
subclass of: SO_0000673
so part of: PQV96_RS22245
location: complement(22120..>22191)
location: region:22120-22191:-1
so has part: feature:22120-22191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22120-22191:-1:exon

PQV96_RS22250
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22250
old locus tag: PQV96_22250
so part of: sequence
location: complement(22295..22576)
location: region:22295-22576:-1
so has part: feature:22295-22576:-1:exon
subclass of: SO_0000010

position:22295:-1
position: 22295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22576:-1
position: 22576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22295-22576:-1:exon

PQV96_RS22250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22250
old locus tag: PQV96_22250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020651365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFAGRRWMLWLPVPASVWLALPEWQHIPAMLFGGLIVWIPFWLAWWLSDGFAGMSRWPGTGAPAVSGGVNPHTGKPCTVYHHPWGTTYVGGD
SIO_010081: PQV96_RS22250
subclass of: SO_0000673
so part of: PQV96_RS22250
location: complement(22295..22576)
location: region:22295-22576:-1
so has part: feature:22295-22576:-1:exon

WP_105794836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22295-22576:-1:exon

PQV96_RS22255
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22255
old locus tag: PQV96_22255
so part of: sequence
location: complement(22594..22848)
location: region:22594-22848:-1
so has part: feature:22594-22848:-1:exon
subclass of: SO_0000010

position:22594:-1
position: 22594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22848:-1
position: 22848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22594-22848:-1:exon

PQV96_RS22255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22255
old locus tag: PQV96_22255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013723315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKTLLTGLLAVVAANVVAADGGAPLRGGVCIGPFRGADSVVHCEHIGKVTIRQIYEKGFRVVHMQDDKNTASYVVLVIEEQAR
SIO_010081: PQV96_RS22255
subclass of: SO_0000673
so part of: PQV96_RS22255
location: complement(22594..22848)
location: region:22594-22848:-1
so has part: feature:22594-22848:-1:exon

WP_034033207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22594-22848:-1:exon

PQV96_RS22260
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22260
old locus tag: PQV96_22260
so part of: sequence
location: complement(22845..23186)
location: region:22845-23186:-1
so has part: feature:22845-23186:-1:exon
subclass of: SO_0000010

position:22845:-1
position: 22845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23186:-1
position: 23186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22845-23186:-1:exon

PQV96_RS22260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22260
old locus tag: PQV96_22260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLASLLIGAIEPAGAASLVGGQTDDSVCDLGSASQNARKLSAAGDFIRAQCKNGQMLVGSGIVPAGGFDSEVVRLARTFCRMADIQTRRTQGNMAGLVMEIDEVRCIIGKLPT
SIO_010081: PQV96_RS22260
subclass of: SO_0000673
so part of: PQV96_RS22260
location: complement(22845..23186)
location: region:22845-23186:-1
so has part: feature:22845-23186:-1:exon

WP_201357143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22845-23186:-1:exon

PQV96_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22265
old locus tag: PQV96_22265
so part of: sequence
location: 23309..23560
location: region:23309-23560:1
so has part: feature:23309-23560:1:exon
subclass of: SO_0000010

position:23309:1
position: 23309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23560:1
position: 23560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23309-23560:1:exon

PQV96_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22265
old locus tag: PQV96_22265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002943884.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSPAALSPAQTAHSARAVLAANMIRLRRERGWSQEALAFECGLHRTFVAHCERQVRNISLDNLERIANAFGVQAYALLMPTGI
SIO_010081: PQV96_RS22265
subclass of: SO_0000673
so part of: PQV96_RS22265
location: 23309..23560
location: region:23309-23560:1
so has part: feature:23309-23560:1:exon

WP_026353332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23309-23560:1:exon

PQV96_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22270
old locus tag: PQV96_22270
so part of: sequence
location: complement(23813..24097)
location: region:23813-24097:-1
so has part: feature:23813-24097:-1:exon
subclass of: SO_0000010

position:23813:-1
position: 23813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24097:-1
position: 24097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23813-24097:-1:exon

PQV96_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22270
old locus tag: PQV96_22270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGKTDWPPEVAGVLGLLESQPPEAAMLVGCFLAAVAHPDHAAELAMFDKLLSAARMAVGRFFSFFLAGGLDDAGREKLHSHMQAWFVRQRRFR
SIO_010081: PQV96_RS22270
subclass of: SO_0000673
so part of: PQV96_RS22270
location: complement(23813..24097)
location: region:23813-24097:-1
so has part: feature:23813-24097:-1:exon

WP_105772948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23813-24097:-1:exon

PQV96_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22275
old locus tag: PQV96_22275
so part of: sequence
location: complement(24087..24716)
location: region:24087-24716:-1
so has part: feature:24087-24716:-1:exon
subclass of: SO_0000010

position:24087:-1
position: 24087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24716:-1
position: 24716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24087-24716:-1:exon

PQV96_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22275
old locus tag: PQV96_22275
inference: COORDINATES: protein motif:HMM:NF037437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin VbhA family protein
translation: MKDRDHNEAMAGMFQAEPRFAADYLRQVLADGEPADVRAGLRQMADVLRVSQAAAPTDSAPSAGLFDRAGVRYEVACDVIGALIAHYAEIMGREREQAQPNEAVLRVAGAMKAALAGERDDLDPRDSAGIEAAISRYAPLARRLYGQAENDHARQEQRRADFDQVHASLALEGLAMSADDLAVQALLIRGDITHDEAVQCYRILHRHAR
SIO_010081: PQV96_RS22275
subclass of: SO_0000673
so part of: PQV96_RS22275
location: complement(24087..24716)
location: region:24087-24716:-1
so has part: feature:24087-24716:-1:exon

WP_181153543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24087-24716:-1:exon

PQV96_RS22280
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22280
old locus tag: PQV96_22280
so part of: sequence
location: complement(24703..25575)
location: region:24703-25575:-1
so has part: feature:24703-25575:-1:exon
subclass of: SO_0000010

position:24703:-1
position: 24703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25575:-1
position: 25575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24703-25575:-1:exon

PQV96_RS22280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22280
old locus tag: PQV96_22280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005796449.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MAREGITFEQVAAAADALVGEGQQPTIRAIRERLGTGSPNTVHKHLTAWREARPVAAAAAPELPQALTAAIAAEIERAAAQARAEIEGRLVQAQGEAVELAAAGEVIEAERDALAEQVAELTRERDTLAGKAEQQAADLADQAQRIEREQQAAESARVELATARLKIEAQAERQTEQAAEIERLRAALADAQQGRTAAEQQAAVLAAKLEACAERVARAEARVEQIEQQAAKAAQANEEARAAAAQEARQVQAERDEARKVAAEAREQAARLAGQLEALTTKERKTDERP
SIO_010081: PQV96_RS22280
subclass of: SO_0000673
so part of: PQV96_RS22280
location: complement(24703..25575)
location: region:24703-25575:-1
so has part: feature:24703-25575:-1:exon

WP_034033204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24703-25575:-1:exon

PQV96_RS22285
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22285
old locus tag: PQV96_22285
pseudo: true
so part of: sequence
location: complement(26748..>26981)
location: region:26748-26981:-1
so has part: feature:26748-26981:-1:exon
subclass of: SO_0000010

position:26748:-1
position: 26748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26981:-1
position: 26981
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26748-26981:-1:exon

PQV96_RS22285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22285
old locus tag: PQV96_22285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015472949.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication protein
SIO_010081: PQV96_RS22285
subclass of: SO_0000673
so part of: PQV96_RS22285
location: complement(26748..>26981)
location: region:26748-26981:-1
so has part: feature:26748-26981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26748-26981:-1:exon

PQV96_RS22290
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22290
old locus tag: PQV96_22290
so part of: sequence
location: 27047..28251
location: region:27047-28251:1
so has part: feature:27047-28251:1:exon
subclass of: SO_0000010

position:27047:1
position: 27047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28251:1
position: 28251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27047-28251:1:exon

PQV96_RS22290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22290
old locus tag: PQV96_22290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611904.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MSDKQVRAQYTREFKLEAVRQVRAGQAIAVVAKVLGIPKASLGNWVRLSSKGELNDVGSADKATKVSPEQMEIARLRAENARLRMERDIAKKAGGVLRAGHAARYAWIDQMKYRYPVSVSCGVLEVSASGYFNWLRRREDGHGRSGPGRLYSDEALLAHIRAIHAEVKGEYGWPRMHKELVARGIRVGKDRVRKLMQQHGIKAKTKRKFVVTTDSRHSLPVAPDLVQRRFNPEAPNQLWSGDITYIQTDEGWLYLAAVIDLFSRQVVGWSLQSHMQASLVKDALTMAWWRRRPPPGLIFHSDRGSQYCSHEVQGALKDWGMRSSMSRKGNCWDNAPTESFWGRLKTASVHGCKFATREQAGQAVMDWMAFYNHRRLHSSLGYLSPMQYEQRWYEAQRKKAA
SIO_010081: PQV96_RS22290
subclass of: SO_0000673
so part of: PQV96_RS22290
location: join(27047..27326,27326..28251)
location: region:27047-28251:1
so has part: feature:27047-27326:1:exon
so has part: feature:27326-28251:1:exon

WP_142085889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27047-27326:1:exon

position:27326:1
position: 27326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27326-28251:1:exon

PQV96_RS22295
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22295
old locus tag: PQV96_22295
so part of: sequence
location: 28699..30867
location: region:28699-30867:1
so has part: feature:28699-30867:1:exon
subclass of: SO_0000010

position:28699:1
position: 28699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30867:1
position: 30867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28699-30867:1:exon

PQV96_RS22295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22295
old locus tag: PQV96_22295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011804796.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO process: GO:0015891 - siderophore transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent siderophore receptor
translation: MNRTQSSGVVTSPRRNAICRAIEIVAATATLSMPAASALAQAASLPTVTVTSETEEGYAAPRSSTATKTDTPVRDTPQSISVVTKDQIRDQAAQSLAEATLYVPGIGFAQGEGNRETPIFRGISSTGDFFIDGVRDDVQYYRDLYNIERVEVFKGPNAMIFGRGATGGLINRVSKQARWTPSLGGSVTLGSNSNRRLTADINQPISDQLAFRVNALYENSDSYRDGVWIKRSGVNPTLSWRAGSKTLVTLGYEHFKDDRIADRGISTFKGVPLAVAPSTFFGNAAGSPTGTTLNAFSASVEHEFDSGLSLRNRTRITDQDKFYQNVFPGAVNAAGTSVAISAYNNATSRKSIFNQTDFSYNISAGSVKHKLLFGMELGQQDTDNFRNTGYFPGNVTSVTVPLSNPTTSLPIQYRQSATDADNSGKAKVAALYFQDQIELSPQFQIVGGLRYDKFTVDFRNNRNGQTFDTSDGLVSPRVGVIYKPVEAVSLYANYSVAYQPRAGDQLSSLSLTNAALKPEKFKNFELGAKWDLRSNLSATAALYRLDRTNVIVLDPTDPTSTRTMLSDGQRSQGLELGLTGRVNAAWSVAGGYTYADAKFVADTSATQRAGGAVGQVPKHTLTLWNRYDFTPAWGAGLGVIHRTKMFAANELIATAANPTPNVSLPGYTRVDAAVFYTISKSMQVQLNVENLLNKKYYINANSNTNITPGAPRGVRLALNAKF
SIO_010081: PQV96_RS22295
subclass of: SO_0000673
so part of: PQV96_RS22295
location: 28699..30867
location: region:28699-30867:1
so has part: feature:28699-30867:1:exon

WP_238385505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28699-30867:1:exon

PQV96_RS22300
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22300
old locus tag: PQV96_22300
so part of: sequence
location: 30947..32181
location: region:30947-32181:1
so has part: feature:30947-32181:1:exon
subclass of: SO_0000010

position:30947:1
position: 30947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32181:1
position: 32181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30947-32181:1:exon

PQV96_RS22300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22300
old locus tag: PQV96_22300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558246.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTKSNKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLHEWVKKAEVDSGQRAGTTSSDAQRIKELEREVKELRRANDILKTASAFFCAGGARPPTQIVKAYIDRHRDDYGVEPICRVLQMAPSCYWRHAARQRNPQLRSQRAQRDEGLKADIQRVWHTNWQVYGADKVWLQMNREGIVVARCTVERLMRAMGLQGTRRGRAVRTTTPDTSTPCPLDHVNRHFKASRPNELWVSDFTYVSTWQGWLYVAFVVDVYARRIVGWRVSSSMQTDFVLDALEQALYDRQPVADALTHHSDRGSQYVSIRYTERLDQAGIRPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGIPPAEAEANYWRQLAVSNTSTEVST
SIO_010081: PQV96_RS22300
subclass of: SO_0000673
so part of: PQV96_RS22300
location: join(30947..31229,31229..32181)
location: region:30947-32181:1
so has part: feature:30947-31229:1:exon
so has part: feature:31229-32181:1:exon

WP_142085890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30947-31229:1:exon

position:31229:1
position: 31229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31229-32181:1:exon

PQV96_RS22300
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 80878
locus tag: PQV96_RS22300
old locus tag: PQV96_22300
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PQV96_RS22300
subclass of: SO_0000673
so part of: PQV96_RS22300
location: 31225..31341
location: region:31225-31341:1
so has part: feature:31225-31341:1:exon

position:31225:1
position: 31225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31341:1
position: 31341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31225-31341:1:exon

PQV96_RS22305
type: Gene
subclass of: SO_0000704
RO_0002162: 80878
locus tag: PQV96_RS22305
old locus tag: PQV96_22305
pseudo: true
so part of: sequence
location: <32222..>32434
location: region:32222-32434:1
so has part: feature:32222-32434:1:exon
subclass of: SO_0000010

position:32222:1
position: 32222
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:32434:1
position: 32434
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32222-32434:1:exon

PQV96_RS22305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80878
locus tag: PQV96_RS22305
old locus tag: PQV96_22305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003069804.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cation-transporting P-type ATPase
SIO_010081: PQV96_RS22305
subclass of: SO_0000673
so part of: PQV96_RS22305
location: <32222..>32434
location: region:32222-32434:1
so has part: feature:32222-32434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32222-32434:1:exon