Aphis gossypii mitochondrion, complete genome.
type: Entry
definition: Aphis gossypii mitochondrion, complete genome.
sequence version: NC_024581.1
sequence date: 2023-04-03
sequence: sequence
division: INV
label: NC_024581.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Aphis gossypii (cotton aphid)
organism: Aphis gossypii
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Aphidini; Aphis; Aphis.
reference: 1
references: 24865902
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to KJ669654.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 15869
topology: circular
so has quality: SO_0000988
location: 1..15869
location: region:1-15869:1
RO_0002162: 80765

NC_024581
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete mitochondrial genome of Aphis gossypii Glover (Hemiptera: Aphididae)
author: Zhang, S.
author: Luo, J.
author: Wang, C.
author: Lv, L.
author: Li, C.
author: Jiang, W.
author: Cui, J.
author: Rajput, L.B.
journal: Mitochondrial DNA (2014) In press
pubmed: 24865902
comments: Publication Status: Available-Online prior to print

24865902
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (28-JUL-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Zhang, S.
journal: Submitted (02-APR-2014) plant protection, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, Henan 455000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15869:1
position: 15869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15869:1:source
so part of: sequence
organism: Aphis gossypii
organelle: mitochondrion
mol type: genomic DNA
host: cotton
country: China

80765
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Tyr
anticodon: (pos:complement(15866..15868),aa:Tyr,seq:gta)
so part of: sequence
location: complement(join(15832..15869,1..29))
location: region:1-15869:-1
so has part: feature:1-29:-1:region
so has part: feature:15832-15869:-1:region

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15869:-1
position: 15869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-29:-1:region

position:29:-1
position: 29
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15832-15869:-1:region

position:15832:-1
position: 15832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: COX1
so part of: sequence
location: 1..1566
location: region:1-1566:1
so has part: feature:1-1566:1:exon
subclass of: SO_0000010

19909113
type: Gene
SIO_000068: ncbigene

position:1566:1
position: 1566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1566:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: COX1
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit I
translation: MYNLLSAILSMKWIFSTNHKDIGTLYFLFGIWSGMIGSSLSILIRLELSQINSIINNNQLYNVIVTIHAFIMIFFMTMPIVIGGFGNWLIPMMMGCPDMSFPRLNNISFWLLPPSLMMMICSFMINNGTGTGWTIYPPLSNNIAHNNISVDLTIFSLHLAGISSILGAINFICTILNMMPNNMKLNQIPLFPWSILITAMLLILSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQESNKNETFGNISMIYAMLTIGLLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWLATIYGSKINFSPSTIWALGFIFLFTIGGLTGVILANSSIDIILHDTYYVVAHFHYVLSMGIVFAIIASLIHWFPIFTGFSMNNFILKIQFILMFIGVNMTFFPQHFLGLNGMPRRYTDYPNNFLLWNMISSIGSMISTFSIIILIYSIWNSLFLKKTTIFKLNLSNSIEWIHNLPPLEHSYAELPLITNF
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 1..1566
location: region:1-1566:1
so has part: feature:1-1566:1:exon

YP_009048913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1566:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Leu
anticodon: (pos:1594..1596,aa:Leu,seq:taa)
so part of: sequence
location: 1562..1629
location: region:1562-1629:1
so has part: feature:1562-1629:1:region

position:1562:1
position: 1562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629:1
position: 1629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1562-1629:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: COX2
so part of: sequence
location: 1633..2304
location: region:1633-2304:1
so has part: feature:1633-2304:1:exon
subclass of: SO_0000010

19909101
type: Gene
SIO_000068: ncbigene

position:1633:1
position: 1633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304:1
position: 2304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1633-2304:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: COX2
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit II
translation: MTWMKLSFQNSNSPLMEQLIFFHDHTIFIIIMIMSTITYMMLFIMKNKFINIKISENQMIEFIWTTTPPIILIFIAMPSLHLLYLMDEIKCPILTVKIFGHQWFWSYEYSDFSNIEFESYMMNELNKENFRLIEVDNKTILPFKFNIRLLISSDDVIHSWTIPSLAIKIDAIPGRMNQINLFMNRPGIYFGQCSEICGINHSFMPIQIESINLNKFIYWIKNF
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 1633..2304
location: region:1633-2304:1
so has part: feature:1633-2304:1:exon

YP_009048914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1633-2304:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Lys
anticodon: (pos:2339..2341,aa:Lys,seq:ctt)
so part of: sequence
location: 2307..2379
location: region:2307-2379:1
so has part: feature:2307-2379:1:region

position:2307:1
position: 2307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2379:1
position: 2379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2307-2379:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Asp
anticodon: (pos:2411..2413,aa:Asp,seq:gtc)
so part of: sequence
location: 2380..2442
location: region:2380-2442:1
so has part: feature:2380-2442:1:region

position:2380:1
position: 2380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442:1
position: 2442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380-2442:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ATP8
so part of: sequence
location: 2452..2601
location: region:2452-2601:1
so has part: feature:2452-2601:1:exon
subclass of: SO_0000010

19909102
type: Gene
SIO_000068: ncbigene

position:2452:1
position: 2452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601:1
position: 2601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452-2601:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ATP8
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 8
translation: MAPINWLILFMFFFLMFYLIMNFLYFSFIKNIKMKKNFKNQLKNYNKFI
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 2452..2601
location: region:2452-2601:1
so has part: feature:2452-2601:1:exon

YP_009048915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2452-2601:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ATP6
so part of: sequence
location: 2582..3235
location: region:2582-3235:1
so has part: feature:2582-3235:1:exon
subclass of: SO_0000010

19909103
type: Gene
SIO_000068: ncbigene

position:2582:1
position: 2582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235:1
position: 3235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2582-3235:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ATP6
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 6
translation: MTTNLFNIFDPSTTIFNLEMNWISTFIIIMFMPNLLWILPNRINWMMFKMFNMLNNEMLMLYKMKNNKSPAFLFISLFMFILLNNFFSLFPYIFSSSSHMVFSITLALPFWFFFIIFSVCKNTKNMIAHLIPLNTPIYLAPLMTIIETMSIIIRPMSLSIRLTANLIAGHLLMTLLNYNSLMIIIILIQMFMMIFELCVALIQSYVFSILSSLYSSE
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 2582..3235
location: region:2582-3235:1
so has part: feature:2582-3235:1:exon

YP_009048916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2582-3235:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: COX3
so part of: sequence
location: 3235..4020
location: region:3235-4020:1
so has part: feature:3235-4020:1:exon
subclass of: SO_0000010

19909104
type: Gene
SIO_000068: ncbigene

position:4020:1
position: 4020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3235-4020:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: COX3
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit III
translation: MMKMNQPYFILNLSPWPILMALNTFNLMISNIMTMNFKFNLILLINFLMIILISMLWWRDVIRESTFQGNHNFFIMNLIKFSMILFIISEMFLFISFFWNFLHNSLAPSIELGLNWPPKNISFFNPLLIPLLNTIILLTSSFTVTLTHFYLLNNLKKKTIIFMNLTIILSIYFLMLQMLEYNQATFTFSDSIFGSSFYMATGFHGLHVIIGTIFLMINLMRMLKLHFSFIHHISFELAAWYWHFIDIIWLFLYMTFYWWNN
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 3235..4020
location: region:3235-4020:1
so has part: feature:3235-4020:1:exon

YP_009048917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3235-4020:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Gly
anticodon: (pos:4050..4052,aa:Gly,seq:tcc)
so part of: sequence
location: 4020..4082
location: region:4020-4082:1
so has part: feature:4020-4082:1:region

position:4082:1
position: 4082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4020-4082:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ND3
so part of: sequence
location: 4083..4436
location: region:4083-4436:1
so has part: feature:4083-4436:1:exon
subclass of: SO_0000010

19909105
type: Gene
SIO_000068: ncbigene

position:4083:1
position: 4083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4436:1
position: 4436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4083-4436:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ND3
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 3
translation: MLLNLISMIILTLILMILFMIMILINMKMKFNHNKSAPFECGFDPFNKSRIPFSLNFYLIAIIFLIFDIEISIILPMILNFKISNMFYFNTMFMIFFMFMIITIFYEWKFGSLNWKI
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 4083..4436
location: region:4083-4436:1
so has part: feature:4083-4436:1:exon

YP_009048918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4083-4436:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Ala
anticodon: (pos:4469..4471,aa:Ala,seq:tgc)
so part of: sequence
location: 4437..4500
location: region:4437-4500:1
so has part: feature:4437-4500:1:region

position:4437:1
position: 4437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500:1
position: 4500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4437-4500:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Arg
anticodon: (pos:4531..4533,aa:Arg,seq:tcg)
so part of: sequence
location: 4500..4564
location: region:4500-4564:1
so has part: feature:4500-4564:1:region

position:4564:1
position: 4564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500-4564:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Asn
anticodon: (pos:4594..4596,aa:Asn,seq:gtt)
so part of: sequence
location: 4564..4627
location: region:4564-4627:1
so has part: feature:4564-4627:1:region

position:4627:1
position: 4627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4564-4627:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Leu
anticodon: (pos:4671..4673,aa:Leu,seq:taa)
so part of: sequence
location: 4633..4708
location: region:4633-4708:1
so has part: feature:4633-4708:1:region

position:4633:1
position: 4633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4708:1
position: 4708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4633-4708:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Glu
anticodon: (pos:4722..4724,aa:Glu,seq:ttc)
so part of: sequence
location: 4691..4752
location: region:4691-4752:1
so has part: feature:4691-4752:1:region

position:4691:1
position: 4691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4752:1
position: 4752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4691-4752:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 80765
note: repeat_region
so part of: sequence
location: 4747..5530
location: region:4747-5530:1
so has part: feature:4747-5530:1:region

position:4747:1
position: 4747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5530:1
position: 5530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4747-5530:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Phe
anticodon: (pos:complement(5549..5551),aa:Phe,seq:gaa)
so part of: sequence
location: complement(5519..5582)
location: region:5519-5582:-1
so has part: feature:5519-5582:-1:region

position:5519:-1
position: 5519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5582:-1
position: 5582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5519-5582:-1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ND5
so part of: sequence
location: complement(5583..7253)
location: region:5583-7253:-1
so has part: feature:5583-7253:-1:exon
subclass of: SO_0000010

19909106
type: Gene
SIO_000068: ncbigene

position:5583:-1
position: 5583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7253:-1
position: 7253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5583-7253:-1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ND5
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 5
translation: MIFFILGLLLIYFDKLYFVEYMFFFFNSCMVLYVLLIDWMSLMFISFVFLISSMILLYSMEYMNYDFNSSRFLMLMNFFIMFMFFLIISPNLISILLGWDGLGMVSFCLVVFYQNKKSYSSGLVTVILNRLGDLFIILSMIWMLNFGSWNFILIDYYINYNYLFFIILLIMMASLTKSAQIPFSSWLPLAMAAPTPVSSLVHSSTLVTAGIYLMIRLMKIFLKFSFLNYLLVISCLTMFMAGLNAIFEFDLKKIIAFSTLSQMSFMFMILCLGKIDMCFFYLLMHALFKSMMFLSAGILILNMNNNQDIRKMGGLIDCLPFCGLIFMFTLMSLCGFPFFCSFYSKDLIFEYFLMMDLNFFFFFFFLFSFFLTFFYSIRVIYYLMMMNYSMYNYLMIIKFESKFLIISMLLISLIMIFFGSFFMWLMFYKFDLILLEFKFKILSVLILFFSIWFFFEFNNFLFSMKYLISMFNIFFFSMMWNLLFLSINFFLNNFLFIGFFSLKLFETGWIEYNLNSGLIFFFKKMIFFIQNIFLNSYKVYILLFFMWFLIIFFFNY
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: complement(5583..7253)
location: region:5583-7253:-1
so has part: feature:5583-7253:-1:exon

YP_009048919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5583-7253:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-His
anticodon: (pos:complement(7340..7342),aa:His,seq:gtg)
so part of: sequence
location: complement(7309..7372)
location: region:7309-7372:-1
so has part: feature:7309-7372:-1:region

position:7309:-1
position: 7309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7372:-1
position: 7372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7309-7372:-1:region

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ND4
so part of: sequence
location: complement(7372..8681)
location: region:7372-8681:-1
so has part: feature:7372-8681:-1:exon
subclass of: SO_0000010

19909107
type: Gene
SIO_000068: ncbigene

position:8681:-1
position: 8681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7372-8681:-1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:complement(7372..7373),aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 4
translation: MLILFSMIFFSLNIKSWWLAQNFFFFFFFFMYFKIPMFNYFLNISYLFGMDMFSYLMFMLGTWIISLVYISSLNLKNIYLNYFNFLMFIFLIIFYFCFFSNNFIMFYIFYEINLIPVIILIYGWGYQYERFKAGFYLFIYMIFFSLPFFSCLLNLNNTVFLFMYYFDYLNNLNFYYYLFLMMIFLVKMPLFLFHIWLPKAHVEAPICGSMILAGIMLKLGGFGIYHILMLVFKVNLNLNYFFISLCLIGMMVLSLVCFFQSDLKILIAYSSVVHMGLVIIGFLTLNNWGYFGSLILMFGHGLCSSGLFCLSNICYLRFKSRSLFLNKGLINIYPFLSFWWFLLCSSNMSFPPSFNLFGELFLLISLMIWLDYFYLLYFLIMILMFLYSLYLYLYTQYGKLFFNMNYLVYINLTEYLLLFMHWVPLNLIFLIMELFC
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: complement(7372..8681)
location: region:7372-8681:-1
so has part: feature:7372-8681:-1:exon

YP_009048920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7372-8681:-1:exon

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ND4L
so part of: sequence
location: complement(8690..8980)
location: region:8690-8980:-1
so has part: feature:8690-8980:-1:exon
subclass of: SO_0000010

19909108
type: Gene
SIO_000068: ncbigene

position:8690:-1
position: 8690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8980:-1
position: 8980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8690-8980:-1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ND4L
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4L
translation: MNLFILVLLFMLFSGILFYIFNFNHLLMMLLGLEYLLLILSLLFLINLMMFIKQYILLLIFFIFCISESVLGLTILILMVRMYGNDYLKSLMILQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: complement(8690..8980)
location: region:8690-8980:-1
so has part: feature:8690-8980:-1:exon

YP_009048921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8690-8980:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Thr
anticodon: (pos:9012..9014,aa:Thr,seq:tgt)
so part of: sequence
location: 8982..9043
location: region:8982-9043:1
so has part: feature:8982-9043:1:region

position:8982:1
position: 8982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9043:1
position: 9043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8982-9043:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Pro
anticodon: (pos:complement(9082..9084),aa:Pro,seq:tgg)
so part of: sequence
location: complement(9047..9114)
location: region:9047-9114:-1
so has part: feature:9047-9114:-1:region

position:9047:-1
position: 9047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9114:-1
position: 9114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9047-9114:-1:region

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ND6
so part of: sequence
location: 9116..9607
location: region:9116-9607:1
so has part: feature:9116-9607:1:exon
subclass of: SO_0000010

19909109
type: Gene
SIO_000068: ncbigene

position:9116:1
position: 9116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9607:1
position: 9607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9116-9607:1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ND6
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 6
translation: MLKFILMTNLIMAILLTMMKSPISSNLIILIQTMMLTLMINMINKTAWISFMIFILYIGGLMIIFLYISSIAFNEFNINKNYKNILFKLMLLSIFMLYFKLYFNMENFTYENKFNFEDNFNLLNMFMMPNNLMIYFIMLILFFMLILIIWMLKINKGPIRQKN
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: 9116..9607
location: region:9116-9607:1
so has part: feature:9116-9607:1:exon

YP_009048922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9116-9607:1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: CYTB
so part of: sequence
location: 9611..10726
location: region:9611-10726:1
so has part: feature:9611-10726:1:exon
subclass of: SO_0000010

19909110
type: Gene
SIO_000068: ncbigene

position:9611:1
position: 9611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10726:1
position: 10726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9611-10726:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: CYTB
codon start: 1
transl table: 5
product: cytochrome b
translation: MKKNMLKTLSPMLNLPTPASISFMWNFGSLLMICLINQILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLIRSFHANGASMFFIMIYIHISRGIYMNSFNFKMTWIIGVMLLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIIIMFTFIHLFFLHLTGSNNPLGINSNFDKITFSPYFLIKDLIGLIMFMWMFLILTLIFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRAIPNKLGGVIALMLSILILLILPMLNNKKFLSNKFYPMNKIMFWTFIMTFFMLTWIGMQPVEYPFISTSQIFTMIYFSYFFINFYLMKMWDNLLI
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 9611..10726
location: region:9611-10726:1
so has part: feature:9611-10726:1:exon

YP_009048923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9611-10726:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Ser
anticodon: (pos:10765..10767,aa:Ser,seq:tga)
so part of: sequence
location: 10733..10798
location: region:10733-10798:1
so has part: feature:10733-10798:1:region

position:10733:1
position: 10733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10798:1
position: 10798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10733-10798:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ND1
so part of: sequence
location: complement(10809..11744)
location: region:10809-11744:-1
so has part: feature:10809-11744:-1:exon
subclass of: SO_0000010

19909111
type: Gene
SIO_000068: ncbigene

position:10809:-1
position: 10809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11744:-1
position: 11744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10809-11744:-1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ND1
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 1
translation: MFVFIMIVNFLFLFLMVFMSVAFFTLMERKVLGYIQLRKGPNKFFIKGIFQPMGDGLKLFFKEVNYPSNMNFFIFMISPLLGLLISIFFWFVYPYIGMNYIMGFGLIYMFCCSSLMVYIFLMISWSSNSNYSVLGMIRFISQMISYEVSMMIIIMNLMFLINSFNLNDFYIYQINMKFFFFLFLIFILLLISFLAEMNRSPFDFSEGESELVSGFNIEFSSLSFIFIFMSEYMSIMFMGMLLCEMFFGLMLNKFYLNIFILMFMFLVIWLRGFLPRFRYDKLMYLIWKLILPLSLFLFMFNFSMKLFNLYH
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: complement(10809..11744)
location: region:10809-11744:-1
so has part: feature:10809-11744:-1:exon

YP_009048924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10809-11744:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Leu
anticodon: (pos:complement(11778..11780),aa:Leu,seq:tag)
so part of: sequence
location: complement(11745..11809)
location: region:11745-11809:-1
so has part: feature:11745-11809:-1:region

position:11745:-1
position: 11745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11809:-1
position: 11809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11745-11809:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 80765
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: complement(11810..13069)
location: region:11810-13069:-1
so has part: feature:11810-13069:-1:region

position:11810:-1
position: 11810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13069:-1
position: 13069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11810-13069:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Val
anticodon: (pos:complement(13099..13101),aa:Val,seq:tac)
so part of: sequence
location: complement(13055..13131)
location: region:13055-13131:-1
so has part: feature:13055-13131:-1:region

position:13055:-1
position: 13055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13131:-1
position: 13131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13055-13131:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 80765
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: complement(13142..13909)
location: region:13142-13909:-1
so has part: feature:13142-13909:-1:region

position:13142:-1
position: 13142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13909:-1
position: 13909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13142-13909:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 80765
note: control region
so part of: sequence
location: 13916..14542
location: region:13916-14542:1
so has part: feature:13916-14542:1:region

position:13916:1
position: 13916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14542:1
position: 14542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13916-14542:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Ile
anticodon: (pos:14565..14567,aa:Ile,seq:gat)
so part of: sequence
location: 14537..14600
location: region:14537-14600:1
so has part: feature:14537-14600:1:region

position:14537:1
position: 14537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14600:1
position: 14600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14537-14600:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Gln
anticodon: (pos:complement(14632..14634),aa:Gln,seq:ttg)
so part of: sequence
location: complement(14598..14663)
location: region:14598-14663:-1
so has part: feature:14598-14663:-1:region

position:14598:-1
position: 14598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14663:-1
position: 14663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14598-14663:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Met
anticodon: (pos:14699..14701,aa:Met,seq:cat)
so part of: sequence
location: 14668..14733
location: region:14668-14733:1
so has part: feature:14668-14733:1:region

position:14668:1
position: 14668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14733:1
position: 14733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14668-14733:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 80765
gene: ND2
so part of: sequence
location: 14734..15711
location: region:14734-15711:1
so has part: feature:14734-15711:1:exon
subclass of: SO_0000010

19909112
type: Gene
SIO_000068: ncbigene

position:14734:1
position: 14734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15711:1
position: 15711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14734-15711:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80765
gene: ND2
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 2
translation: MNLNLTKIMFFIMLMFSTLMSISASNWLSMWMGLELNLFSIIPILNFKSSIYSIEATMKYFLIQAFASILLLIFLINKNFFFLNNSNIMIIMPLLMKLSLMPFPLGLPSMMEGLNGMAGLLMMTGQKISPLIMISYLNTNKNLIFLITLISMNSILGLNQNSMRKILAMSSINNSTGMWLAILLNNKLWSNYFVIYSMLNFLMIKILNNYNINYINQLKFFNLNFFFKLNMMMLIFSIMGLPPMIGFLMKWMLIKNLIYNNMYMIMMMLIMLTILNLFFYIKMSYFMLFNFNLFNKWYLQFKKNNYNFFLFMNFFSLFFSYLIFY
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 14734..15711
location: region:14734-15711:1
so has part: feature:14734-15711:1:exon

YP_009048925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14734-15711:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Trp
anticodon: (pos:15741..15743,aa:Trp,seq:tca)
so part of: sequence
location: 15710..15771
location: region:15710-15771:1
so has part: feature:15710-15771:1:region

position:15710:1
position: 15710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15771:1
position: 15771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15710-15771:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 80765
product: tRNA-Cys
anticodon: (pos:complement(15796..15798),aa:Cys,seq:gca)
so part of: sequence
location: complement(15764..15830)
location: region:15764-15830:-1
so has part: feature:15764-15830:-1:region

position:15764:-1
position: 15764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15830:-1
position: 15830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15764-15830:-1:region