Lacerta agilis isolate rLacAgi1 chromosome 18, rLacAgi1.pri, whole genome shotgun sequence.
type: Entry
definition: Lacerta agilis isolate rLacAgi1 chromosome 18, rLacAgi1.pri, whole genome shotgun sequence.
sequence version: NC_046329.1
sequence date: 2020-03-28
sequence: sequence
division: CON
label: NC_046329.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA614516
dblink: SAMN12629509
keyword: WGS
keyword: RefSeq
source: Lacerta agilis
organism: Lacerta agilis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Lacerta.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020433.1.\nAssembly name: rLacAgi1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMS00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 24-SEP-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-09-24; VGP assembly\n pipeline individual v. 1.5\nAssembly Name :: rLacAgi1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 63.42x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lacerta agilis Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12095641
topology: linear
so has quality: SO_0000987
location: 1..12095641
location: region:1-12095641:1
RO_0002162: 80427

NC_046329
type: RefSeq
SIO_000068: refseq

PRJNA614516
type: BioProject
SIO_000068: bioproject

SAMN12629509
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12095641:1
position: 12095641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12095641:1:source
so part of: sequence
organism: Lacerta agilis
mol type: genomic DNA
isolate: rLacAgi1
chromosome: 18
sex: female
tissue type: blood
dev stage: adult
country: Sweden: Halland
lat lon: 57.489552 N 11.936655 E
collection date: 28-May-2018
collected by: Mette Lillie, Mats Olsson

80427
type: Taxonomy
SIO_000068: taxonomy

SUGP2
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 23677..48045
location: region:23677-48045:1
so has part: feature:23677-48045:1:exon
subclass of: SO_0000010

117039469
type: Gene
SIO_000068: ncbigene

position:23677:1
position: 23677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48045:1
position: 48045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23677-48045:1:exon

SUGP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SUGP2
product: SURP and G-patch domain containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136580.1
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(23677..23758,25718..25839,34070..35531,36973..37101,37491..37922,39305..39416,40486..40878,41003..41064,43196..43338,44474..44594,44796..48045)
location: region:23677-48045:1
so has part: feature:23677-23758:1:exon
so has part: feature:25718-25839:1:exon
so has part: feature:34070-35531:1:exon
so has part: feature:36973-37101:1:exon
so has part: feature:37491-37922:1:exon
so has part: feature:39305-39416:1:exon
so has part: feature:40486-40878:1:exon
so has part: feature:41003-41064:1:exon
so has part: feature:43196-43338:1:exon
so has part: feature:44474-44594:1:exon
so has part: feature:44796-48045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23677-23758:1:exon

position:23758:1
position: 23758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25718-25839:1:exon

position:25718:1
position: 25718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25839:1
position: 25839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34070-35531:1:exon

position:34070:1
position: 34070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35531:1
position: 35531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36973-37101:1:exon

position:36973:1
position: 36973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37101:1
position: 37101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37491-37922:1:exon

position:37491:1
position: 37491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37922:1
position: 37922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39305-39416:1:exon

position:39305:1
position: 39305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39416:1
position: 39416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:40486-40878:1:exon

position:40486:1
position: 40486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40878:1
position: 40878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:41003-41064:1:exon

position:41003:1
position: 41003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41064:1
position: 41064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43196-43338:1:exon

position:43196:1
position: 43196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43338:1
position: 43338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44474-44594:1:exon

position:44474:1
position: 44474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44594:1
position: 44594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44796-48045:1:exon

position:44796:1
position: 44796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUGP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SUGP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:37089..37091,aa:OTHER)
product: LOW QUALITY PROTEIN: SURP and G-patch domain-containing protein 2
translation: MAARRMTQESFDALMQVKAKRHRLDRSDPIDEALHQLRVHSHPAQRTQYEDEDGDFHEERKYLHSDWRGEAREASNEDYSVPPYQSEEEDXTTHTRSRNQDYVQALSRDPDYGRLSSAERELAGPSTRERSYGRLASXERDYGRVSSRETSRLHDADYSSAELLSGFHSPGLLEEEFGTVRSQDYNLEYGLQAEREFAPSLYAGSDLTAKHILAPKGLVKSKTDAVLPMKKWXQALSSHDLLGEPADPSKRGAFPAQHLQLGQRPSLSLRGTLQYDKPETMRKEPQLALSGPLDVFTTFGVEIINWAGFHKIKKDLEYMEMYRVLFKLESETCAKMLASFKCSLKMEHQDFCYSIVRTLQHPALQTPKVDGQFLNLLLEKKLVATKNGFFQLIKPFDRYMMHLQACLLKSTVPLLMACNAYELGLKASSFSDPGQMAAXFETTASLCRKSLVLLGQTFALASSFGRRRSWRPLGLKEVAPLPILFPNFDTSALFGREYIEHLQGWLEKSGYQMQLKRPSAETPSPQVPQRADRKVTETIEKMVDGIISGTLKMEERAQLDNPEYWXISSEDSLEHKYYKLKLSEMYWLKSAAKEKPKQEKTPELQDLAVVRALLRARKVLHIKKRLFWKRRPRILQRRVVRAQRLKRATVGTRRSCPRDNAQAAAPAGEPKAHPAETSLEKAGVCDSATDPEGAPREGLGAGSLIGLACQFSDVDPKTMVTAERLAKLVAEVGPEIEQFSIDNSTDNLDLWFLHDRESSAFRFYRMKVHELCPSINFSAFPGPSSESPAPXENNEEEGGGRGRRRREAPQSGMEEEEAQAGSANVGASSTAGEGQPEGTTSEASAQGPLRGSAFGRKRASSRSLKVGLIPASKRVCLIDEPKVHDPVRIAYDRPCGYQSHKNKWQKSKDLEFSHKRLNQKNIGFQMLQKMGWKEGLGLGAHGKGIKDPVKVGSTSAGEGLGVVGDENKEDTFATFRQMIQMYYLKKACNK
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(25725..25839,34070..35531,36973..37101,37491..37922,39305..39416,40486..40878,41003..41064,43196..43338,44474..44594)
location: region:25725-44594:1
so has part: feature:25725-25839:1:exon
so has part: feature:34070-35531:1:exon
so has part: feature:36973-37101:1:exon
so has part: feature:37491-37922:1:exon
so has part: feature:39305-39416:1:exon
so has part: feature:40486-40878:1:exon
so has part: feature:41003-41064:1:exon
so has part: feature:43196-43338:1:exon
so has part: feature:44474-44594:1:exon

XP_032992471.1
type: Protein
SIO_000068: ncbiprotein

position:25725:1
position: 25725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25725-25839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34070-35531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36973-37101:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37491-37922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39305-39416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40486-40878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41003-41064:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43196-43338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44474-44594:1:exon

LOC117039550
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70925..83753
location: region:70925-83753:1
so has part: feature:70925-83753:1:exon
subclass of: SO_0000010

117039550
type: Gene
SIO_000068: ncbigene

position:70925:1
position: 70925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83753:1
position: 83753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70925-83753:1:exon

LOC117039550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039550
product: semaphorin-4D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033136704.1
SIO_010081: LOC117039550
subclass of: SO_0000673
so part of: LOC117039550
location: join(70925..71058,71331..71507,83473..83753)
location: region:70925-83753:1
so has part: feature:70925-71058:1:exon
so has part: feature:71331-71507:1:exon
so has part: feature:83473-83753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70925-71058:1:exon

position:71058:1
position: 71058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71331-71507:1:exon

position:71331:1
position: 71331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71507:1
position: 71507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83473-83753:1:exon

position:83473:1
position: 83473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117039550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4D-like
translation: MILCRRMGQAPTRTVYVFFTEAAVEFEFYDKLLVSRIAQICTGDLGRRRTLKKKWTSFLKATLVCSAPESDFQFNVLHAVFMIKTTNWQESIFYGIFTQHVGEIGHLRHLCVQDGSRSRRLPERKLQRPPCR
SIO_010081: LOC117039550
subclass of: SO_0000673
so part of: LOC117039550
location: join(70933..71058,71331..71507,83473..83568)
location: region:70933-83568:1
so has part: feature:70933-71058:1:exon
so has part: feature:71331-71507:1:exon
so has part: feature:83473-83568:1:exon

XP_032992595.1
type: Protein
SIO_000068: ncbiprotein

position:70933:1
position: 70933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83568:1
position: 83568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70933-71058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71331-71507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83473-83568:1:exon

LOC117039549
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 84567..93347
location: region:84567-93347:1
so has part: feature:84567-93347:1:exon
subclass of: SO_0000010

117039549
type: Gene
SIO_000068: ncbigene

position:84567:1
position: 84567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93347:1
position: 93347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84567-93347:1:exon

LOC117039549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039549
product: semaphorin-4D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033136703.1
SIO_010081: LOC117039549
subclass of: SO_0000673
so part of: LOC117039549
location: join(84567..84869,85703..85869,87141..87193,92491..93347)
location: region:84567-93347:1
so has part: feature:84567-84869:1:exon
so has part: feature:85703-85869:1:exon
so has part: feature:87141-87193:1:exon
so has part: feature:92491-93347:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84567-84869:1:exon

position:84869:1
position: 84869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85703-85869:1:exon

position:85703:1
position: 85703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85869:1
position: 85869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87141-87193:1:exon

position:87141:1
position: 87141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87193:1
position: 87193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92491-93347:1:exon

position:92491:1
position: 92491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117039549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4D-like
translation: MANWSGGLRDLIQSVRNGDASRCPEVAKNARRLPVTLGSSPQLSCSSLSNLATSVWTFNGSSLQDEEPKYLFHARGLVVFNMTASDVGLYECQSVETSNGREFRISMSTYFLYLQQESSFTMAPKGEPSNRECTVSVAPKLQPLASLQTEDPARLERPQRFQGLSFTLVLWGGSLCPAFPFLALLEPLRGPPLSPLERCVEQEVRNGGCCWGGES
SIO_010081: LOC117039549
subclass of: SO_0000673
so part of: LOC117039549
location: join(85844..85869,87141..87193,92491..93059)
location: region:85844-93059:1
so has part: feature:85844-85869:1:exon
so has part: feature:87141-87193:1:exon
so has part: feature:92491-93059:1:exon

XP_032992594.1
type: Protein
SIO_000068: ncbiprotein

position:85844:1
position: 85844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93059:1
position: 93059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85844-85869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87141-87193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92491-93059:1:exon

HOMER3
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96736..137866
location: region:96736-137866:1
so has part: feature:96736-137866:1:exon
subclass of: SO_0000010

117039540
type: Gene
SIO_000068: ncbigene

position:96736:1
position: 96736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137866:1
position: 137866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96736-137866:1:exon

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: HOMER3
product: homer scaffold protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033136691.1
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(96736..96825,97197..97340,112853..113012,113634..113790,114176..114307,114829..114936,117778..117899,118191..118347,133030..133137,135736..135810,137002..137866)
location: region:96736-137866:1
so has part: feature:96736-96825:1:exon
so has part: feature:97197-97340:1:exon
so has part: feature:112853-113012:1:exon
so has part: feature:113634-113790:1:exon
so has part: feature:114176-114307:1:exon
so has part: feature:114829-114936:1:exon
so has part: feature:117778-117899:1:exon
so has part: feature:118191-118347:1:exon
so has part: feature:133030-133137:1:exon
so has part: feature:135736-135810:1:exon
so has part: feature:137002-137866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96736-96825:1:exon

position:96825:1
position: 96825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97197-97340:1:exon

position:97197:1
position: 97197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97340:1
position: 97340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:112853-113012:1:exon

position:112853:1
position: 112853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113012:1
position: 113012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113634-113790:1:exon

position:113634:1
position: 113634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113790:1
position: 113790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114176-114307:1:exon

position:114176:1
position: 114176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114307:1
position: 114307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:114829-114936:1:exon

position:114829:1
position: 114829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114936:1
position: 114936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:117778-117899:1:exon

position:117778:1
position: 117778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117899:1
position: 117899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:118191-118347:1:exon

position:118191:1
position: 118191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118347:1
position: 118347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:133030-133137:1:exon

position:133030:1
position: 133030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133137:1
position: 133137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:135736-135810:1:exon

position:135736:1
position: 135736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135810:1
position: 135810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:137002-137866:1:exon

position:137002:1
position: 137002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: HOMER3
product: homer scaffold protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033136692.1
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(96736..96825,97197..97340,113634..113790,114176..114307,114829..114936,117778..117899,118191..118347,133030..133137,135736..135816,137002..137866)
location: region:96736-137866:1
so has part: feature:96736-96825:1:exon
so has part: feature:97197-97340:1:exon
so has part: feature:113634-113790:1:exon
so has part: feature:114176-114307:1:exon
so has part: feature:114829-114936:1:exon
so has part: feature:117778-117899:1:exon
so has part: feature:118191-118347:1:exon
so has part: feature:133030-133137:1:exon
so has part: feature:135736-135816:1:exon
so has part: feature:137002-137866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96736-96825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97197-97340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113634-113790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114176-114307:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114829-114936:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117778-117899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118191-118347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133030-133137:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135736-135816:1:exon

position:135816:1
position: 135816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:137002-137866:1:exon

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: HOMER3
product: homer scaffold protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033136690.1
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(96737..96825,97197..97340,112853..113012,113634..113790,114176..114307,114829..114936,117778..117899,118191..118347,133030..133137,135736..135816,137002..137866)
location: region:96737-137866:1
so has part: feature:96737-96825:1:exon
so has part: feature:97197-97340:1:exon
so has part: feature:112853-113012:1:exon
so has part: feature:113634-113790:1:exon
so has part: feature:114176-114307:1:exon
so has part: feature:114829-114936:1:exon
so has part: feature:117778-117899:1:exon
so has part: feature:118191-118347:1:exon
so has part: feature:133030-133137:1:exon
so has part: feature:135736-135816:1:exon
so has part: feature:137002-137866:1:exon

position:96737:1
position: 96737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96737-96825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97197-97340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112853-113012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113634-113790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114176-114307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114829-114936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117778-117899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118191-118347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133030-133137:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135736-135816:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:137002-137866:1:exon

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3 isoform X3
translation: MGEQPIFSTRAHIFQIDPATKRNWIPTSKHALTVSYFYDATRNVYRIISVGGTKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEHHLSQFAEKFQEVKEAARLAREKSQDKTELTSPALSLTSHQILPSPIISSNGPGDDKLFRSQSADMEMTTERERIKKMLSEGSVCEVQWEAEFFTLQDNNNKLVAALNEANANVEQWKKQLAAYQEETETLRQRVAELEAQRGHESSGEAKEEPSPALEALEQLVKARDEELRQLKGQKGGSWDMDEECEDTRQKVQDLERRNTDLERRLRLAEQSLSETLSERKKMYHEVAKVAEIMDMKIFELSELRQDLAKLVESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(97336..97340,113634..113790,114176..114307,114829..114936,117778..117899,118191..118347,133030..133137,135736..135816,137002..137190)
location: region:97336-137190:1
so has part: feature:97336-97340:1:exon
so has part: feature:113634-113790:1:exon
so has part: feature:114176-114307:1:exon
so has part: feature:114829-114936:1:exon
so has part: feature:117778-117899:1:exon
so has part: feature:118191-118347:1:exon
so has part: feature:133030-133137:1:exon
so has part: feature:135736-135816:1:exon
so has part: feature:137002-137190:1:exon

XP_032992583.1
type: Protein
SIO_000068: ncbiprotein

position:97336:1
position: 97336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137190:1
position: 137190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97336-97340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113634-113790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114176-114307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114829-114936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117778-117899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118191-118347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133030-133137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135736-135816:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137002-137190:1:exon

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3 isoform X1
translation: MSTIREQPIFSTRAHIFQIDPATKRNWIPTSKHALTVSYFYDATRNVYRIISVGGTKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEHHLSQFAEKFQEVKEAARLAREKSQDKTELTSPALSLTSHQILPSPIISSNGPGDDKLFRSQSADMEMTTERERIKKMLSEGSVCEVQWEAEFFTLQDNNNKLVAALNEANANVEQWKKQLAAYQEETETLRQRVAELEAQRGHESSGEAKEEPSPALEALEQLVKARDEELRQLKGQKGGSWDMDEECEDTRQKVQDLERRNTDLERRLRLAEQSLSETLSERKKMYHEVAKVAEIMDMKIFELSELRQDLAKLVESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(112999..113012,113634..113790,114176..114307,114829..114936,117778..117899,118191..118347,133030..133137,135736..135816,137002..137190)
location: region:112999-137190:1
so has part: feature:112999-113012:1:exon
so has part: feature:113634-113790:1:exon
so has part: feature:114176-114307:1:exon
so has part: feature:114829-114936:1:exon
so has part: feature:117778-117899:1:exon
so has part: feature:118191-118347:1:exon
so has part: feature:133030-133137:1:exon
so has part: feature:135736-135816:1:exon
so has part: feature:137002-137190:1:exon

XP_032992581.1
type: Protein
SIO_000068: ncbiprotein

position:112999:1
position: 112999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112999-113012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113634-113790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114176-114307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114829-114936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117778-117899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118191-118347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133030-133137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135736-135816:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137002-137190:1:exon

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3 isoform X2
translation: MSTIREQPIFSTRAHIFQIDPATKRNWIPTSKHALTVSYFYDATRNVYRIISVGGTKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEHHLSQFAEKFQEVKEAARLAREKSQDKTELTSPALSLTSHQILPSPIISSNGPGDDKLFRSQSADMEMTTERERIKKMLSEGSVCEVQWEAEFFTLQDNNNKLVAALNEANANVEQWKKQLAAYQEETETLRQRVAELEAQRGHESSGEAKEEPSPALEALEQLVKARDEELRQLKGQKGGSWDMDEECEDTRQKDLERRNTDLERRLRLAEQSLSETLSERKKMYHEVAKVAEIMDMKIFELSELRQDLAKLVESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(112999..113012,113634..113790,114176..114307,114829..114936,117778..117899,118191..118347,133030..133137,135736..135810,137002..137190)
location: region:112999-137190:1
so has part: feature:112999-113012:1:exon
so has part: feature:113634-113790:1:exon
so has part: feature:114176-114307:1:exon
so has part: feature:114829-114936:1:exon
so has part: feature:117778-117899:1:exon
so has part: feature:118191-118347:1:exon
so has part: feature:133030-133137:1:exon
so has part: feature:135736-135810:1:exon
so has part: feature:137002-137190:1:exon

XP_032992582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112999-113012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113634-113790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114176-114307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114829-114936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117778-117899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118191-118347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133030-133137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135736-135810:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137002-137190:1:exon

DDX49
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: DDX49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(152740..164166)
location: region:152740-164166:-1
so has part: feature:152740-164166:-1:exon
subclass of: SO_0000010

117039418
type: Gene
SIO_000068: ncbigene

position:152740:-1
position: 152740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164166:-1
position: 164166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152740-164166:-1:exon

DDX49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: DDX49
product: DEAD-box helicase 49
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033136519.1
SIO_010081: DDX49
subclass of: SO_0000673
so part of: DDX49
location: complement(join(152740..153934,154434..154505,155642..155730,156969..157043,157211..157308,157652..157728,158111..158186,159199..159339,159927..160114,162195..162316,162773..162858,163514..163637,164029..164166))
location: region:152740-164166:-1
so has part: feature:164029-164166:-1:exon
so has part: feature:163514-163637:-1:exon
so has part: feature:162773-162858:-1:exon
so has part: feature:162195-162316:-1:exon
so has part: feature:159927-160114:-1:exon
so has part: feature:159199-159339:-1:exon
so has part: feature:158111-158186:-1:exon
so has part: feature:157652-157728:-1:exon
so has part: feature:157211-157308:-1:exon
so has part: feature:156969-157043:-1:exon
so has part: feature:155642-155730:-1:exon
so has part: feature:154434-154505:-1:exon
so has part: feature:152740-153934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164029-164166:-1:exon

position:164029:-1
position: 164029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163514-163637:-1:exon

position:163514:-1
position: 163514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163637:-1
position: 163637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162773-162858:-1:exon

position:162773:-1
position: 162773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162858:-1
position: 162858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:162195-162316:-1:exon

position:162195:-1
position: 162195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162316:-1
position: 162316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159927-160114:-1:exon

position:159927:-1
position: 159927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160114:-1
position: 160114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159199-159339:-1:exon

position:159199:-1
position: 159199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159339:-1
position: 159339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:158111-158186:-1:exon

position:158111:-1
position: 158111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158186:-1
position: 158186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:157652-157728:-1:exon

position:157652:-1
position: 157652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157728:-1
position: 157728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:157211-157308:-1:exon

position:157211:-1
position: 157211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157308:-1
position: 157308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156969-157043:-1:exon

position:156969:-1
position: 156969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157043:-1
position: 157043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:155642-155730:-1:exon

position:155642:-1
position: 155642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155730:-1
position: 155730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:154434-154505:-1:exon

position:154434:-1
position: 154434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154505:-1
position: 154505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:152740-153934:-1:exon

position:153934:-1
position: 153934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: DDX49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX49
translation: MSGFRALGLSPWLVSQTEQLGLARPSPVQEACIPPALQGRDCMGCAQTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAHQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHIVIATPGRLADHLRSSSTFSLQKVKFLVLDEADRLLEQGCTDFTKDLEVILAALPASRQTMLFSATLTDTLNELKEIAMNKPFFWESKSEVRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDKHEDWSIIIFTNTCKNCQILNMMLRRFNFPSVALHSMMKQKQRFAALAKFKSSVFRILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGIAITLVTQYDIHLVHAIEEHIKMKLQEFSVEEHTVLNILTQVNVVQRECEIRLEATDFDEKKEINKRKQMILEGKDPDLEAQRKAELAKIRKKNVEFRSRVQQVLEDKKQVVLHRKLRKRRQQRKQPVAEK
SIO_010081: DDX49
subclass of: SO_0000673
so part of: DDX49
location: complement(join(153764..153934,154434..154505,155642..155730,156969..157043,157211..157308,157652..157728,158111..158186,159199..159339,159927..160114,162195..162316,162773..162858,163514..163637,164029..164143))
location: region:153764-164143:-1
so has part: feature:164029-164143:-1:exon
so has part: feature:163514-163637:-1:exon
so has part: feature:162773-162858:-1:exon
so has part: feature:162195-162316:-1:exon
so has part: feature:159927-160114:-1:exon
so has part: feature:159199-159339:-1:exon
so has part: feature:158111-158186:-1:exon
so has part: feature:157652-157728:-1:exon
so has part: feature:157211-157308:-1:exon
so has part: feature:156969-157043:-1:exon
so has part: feature:155642-155730:-1:exon
so has part: feature:154434-154505:-1:exon
so has part: feature:153764-153934:-1:exon

XP_032992410.1
type: Protein
SIO_000068: ncbiprotein

position:153764:-1
position: 153764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164143:-1
position: 164143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164029-164143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163514-163637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162773-162858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162195-162316:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159927-160114:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159199-159339:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158111-158186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157652-157728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157211-157308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156969-157043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155642-155730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:154434-154505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153764-153934:-1:exon

COPE
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: COPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 164480..179540
location: region:164480-179540:1
so has part: feature:164480-179540:1:exon
subclass of: SO_0000010

117039419
type: Gene
SIO_000068: ncbigene

position:164480:1
position: 164480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179540:1
position: 179540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164480-179540:1:exon

COPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: COPE
product: COPI coat complex subunit epsilon
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033136520.1
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(164480..164851,165694..165756,165953..166053,168894..169046,170980..171033,173861..173942,175303..175458,176208..176276,177620..177694,179268..179540)
location: region:164480-179540:1
so has part: feature:164480-164851:1:exon
so has part: feature:165694-165756:1:exon
so has part: feature:165953-166053:1:exon
so has part: feature:168894-169046:1:exon
so has part: feature:170980-171033:1:exon
so has part: feature:173861-173942:1:exon
so has part: feature:175303-175458:1:exon
so has part: feature:176208-176276:1:exon
so has part: feature:177620-177694:1:exon
so has part: feature:179268-179540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164480-164851:1:exon

position:164851:1
position: 164851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165694-165756:1:exon

position:165694:1
position: 165694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165756:1
position: 165756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:165953-166053:1:exon

position:165953:1
position: 165953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166053:1
position: 166053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168894-169046:1:exon

position:168894:1
position: 168894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169046:1
position: 169046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170980-171033:1:exon

position:170980:1
position: 170980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171033:1
position: 171033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173861-173942:1:exon

position:173861:1
position: 173861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173942:1
position: 173942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175303-175458:1:exon

position:175303:1
position: 175303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175458:1
position: 175458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176208-176276:1:exon

position:176208:1
position: 176208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176276:1
position: 176276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:177620-177694:1:exon

position:177620:1
position: 177620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177694:1
position: 177694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:179268-179540:1:exon

position:179268:1
position: 179268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: COPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit epsilon
translation: MSKLKGVLYPLATLSLPPQNSSSRQAFRPRGFPIGQTGGWARLKGECQPIGVSRRALPGSARRRRRVRSRRRRGEGEGSGAMAAAAGGTQGEADELFDVRNNFYIGASQAAINEAQRVKPSSPDKELERDIFLYRAYIAQRKYGVVLDEIKPSSPPELQAVRMFAEYLSNESQRDAIVAELDKKMAKSVDVTHTTFLLMAASVYFHDQNLDAALRTLHQGDSLEGTAMTIQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLAMGGEKLQDAYYIFQEMSEKWSPTLLLLNSQAACYMGQGKWDDAEGVLQEALDKDSSHPETLINFVVLSQHLGKPPEVTNRYLSQLKDAHRHHPFIKEHQTKENDFDRLALQYAPSA
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(164495..164851,165694..165756,165953..166053,168894..169046,170980..171033,173861..173942,175303..175458,176208..176276,177620..177694,179268..179315)
location: region:164495-179315:1
so has part: feature:164495-164851:1:exon
so has part: feature:165694-165756:1:exon
so has part: feature:165953-166053:1:exon
so has part: feature:168894-169046:1:exon
so has part: feature:170980-171033:1:exon
so has part: feature:173861-173942:1:exon
so has part: feature:175303-175458:1:exon
so has part: feature:176208-176276:1:exon
so has part: feature:177620-177694:1:exon
so has part: feature:179268-179315:1:exon

XP_032992411.1
type: Protein
SIO_000068: ncbiprotein

position:164495:1
position: 164495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179315:1
position: 179315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164495-164851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:165694-165756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165953-166053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168894-169046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170980-171033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173861-173942:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175303-175458:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176208-176276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:177620-177694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179268-179315:1:exon

CERS1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: CERS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 185291..208341
location: region:185291-208341:1
so has part: feature:185291-208341:1:exon
subclass of: SO_0000010

117039626
type: Gene
SIO_000068: ncbigene

position:185291:1
position: 185291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208341:1
position: 208341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185291-208341:1:exon

CERS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: CERS1
product: ceramide synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033136804.1
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(185291..185541,200760..200919,203508..203688,205345..205506,205826..205973,206988..207121,208241..208341)
location: region:185291-208341:1
so has part: feature:185291-185541:1:exon
so has part: feature:200760-200919:1:exon
so has part: feature:203508-203688:1:exon
so has part: feature:205345-205506:1:exon
so has part: feature:205826-205973:1:exon
so has part: feature:206988-207121:1:exon
so has part: feature:208241-208341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185291-185541:1:exon

position:185541:1
position: 185541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200760-200919:1:exon

position:200760:1
position: 200760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200919:1
position: 200919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203508-203688:1:exon

position:203508:1
position: 203508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203688:1
position: 203688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205345-205506:1:exon

position:205345:1
position: 205345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205506:1
position: 205506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205826-205973:1:exon

position:205826:1
position: 205826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205973:1
position: 205973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206988-207121:1:exon

position:206988:1
position: 206988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207121:1
position: 207121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:208241-208341:1:exon

position:208241:1
position: 208241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: CERS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 1
translation: MEAAEAMPGYEALVRRSYGSLAGALRSCTGCGWELARRTWAENARLAWSELLLCLLCAVGWTVARRAATRRLFRPFAEWCQLSPKDAAKMPESAWKLAFYTLSWSYGTYLLFFAGYPFFHDPPSVFYGWKRGMEVPPDIAIAYLMHGSFYGHSLYATFYMDAWRRDSVVMLVHHIVALMLITFSYMFRYHNVGILVLFLHDISDVQLEFTKLNVYFKYRGGVYHRLNDLISNAGCVSFSISWFWFRLYWFPLKVLYATCHTSLQTVPDIPFYFFFNALLFILTLMNIYWFLYITLFIVKVLLGQVREVNDVREYDVDAACKKRDREFHIPSCWKEGKHLKNGLVKDKRL
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(185320..185541,200760..200919,203508..203688,205345..205506,205826..205973,206988..207121,208241..208283)
location: region:185320-208283:1
so has part: feature:185320-185541:1:exon
so has part: feature:200760-200919:1:exon
so has part: feature:203508-203688:1:exon
so has part: feature:205345-205506:1:exon
so has part: feature:205826-205973:1:exon
so has part: feature:206988-207121:1:exon
so has part: feature:208241-208283:1:exon

XP_032992695.1
type: Protein
SIO_000068: ncbiprotein

position:185320:1
position: 185320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208283:1
position: 208283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185320-185541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200760-200919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203508-203688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205345-205506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205826-205973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206988-207121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:208241-208283:1:exon

GDF1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: GDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 216453..222409
location: region:216453-222409:1
so has part: feature:216453-222409:1:exon
subclass of: SO_0000010

117039652
type: Gene
SIO_000068: ncbigene

position:216453:1
position: 216453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222409:1
position: 222409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216453-222409:1:exon

GDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GDF1
product: growth differentiation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033136830.1
SIO_010081: GDF1
subclass of: SO_0000673
so part of: GDF1
location: join(216453..216912,221472..222409)
location: region:216453-222409:1
so has part: feature:216453-216912:1:exon
so has part: feature:221472-222409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216453-216912:1:exon

position:216912:1
position: 216912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221472-222409:1:exon

position:221472:1
position: 221472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic growth/differentiation factor 1
translation: MEHSHYFQITLATAGMLWVLLVGGMDLQRQESLVLKSLGLTTRPRPRSPPPVPHLLWKMFHKRANLSPASEEGKTPCWVEEFRVPGNIIRVFPDQGRFIHSDKPRSWLCLQKRLYFNFSTLDKGEQVTMAQLQIRFHHNQYQVASPGHPLELSLYQASQAALRGMSSHAYSRKLLVEQSFIHLHKSFVFNLTEAAKMWQTPAKNLGLVLEIAGGKLCSGADSFLDTSLLVVSLAHRQCGSTRKRRSTYYVPTATSNVCKPRRLYISFRDVGWEEWIIAPQGYLANYCLGECPFPLAEDLNSTNHAILQTVVHSLDPEGTPQPCCVPVRLSPISILYYDNDNNVVLRHYEDMVVDECGCR
SIO_010081: GDF1
subclass of: SO_0000673
so part of: GDF1
location: join(216627..216912,221472..222265)
location: region:216627-222265:1
so has part: feature:216627-216912:1:exon
so has part: feature:221472-222265:1:exon

XP_032992721.1
type: Protein
SIO_000068: ncbiprotein

position:216627:1
position: 216627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222265:1
position: 222265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216627-216912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221472-222265:1:exon

UPF1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(227399..260256)
location: region:227399-260256:-1
so has part: feature:227399-260256:-1:exon
subclass of: SO_0000010

117039768
type: Gene
SIO_000068: ncbigene

position:227399:-1
position: 227399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260256:-1
position: 260256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227399-260256:-1:exon

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033136952.1
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(227399..228298,229417..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241127,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260229))
location: region:227399-260229:-1
so has part: feature:259963-260229:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
so has part: feature:244134-244314:-1:exon
so has part: feature:243158-243319:-1:exon
so has part: feature:241877-241961:-1:exon
so has part: feature:241628-241726:-1:exon
so has part: feature:241010-241127:-1:exon
so has part: feature:240764-240923:-1:exon
so has part: feature:240536-240654:-1:exon
so has part: feature:239737-239901:-1:exon
so has part: feature:239246-239360:-1:exon
so has part: feature:238516-238659:-1:exon
so has part: feature:237735-237948:-1:exon
so has part: feature:237303-237420:-1:exon
so has part: feature:236189-236345:-1:exon
so has part: feature:235460-235602:-1:exon
so has part: feature:233163-233337:-1:exon
so has part: feature:232328-232409:-1:exon
so has part: feature:231912-232073:-1:exon
so has part: feature:229892-230109:-1:exon
so has part: feature:229417-229536:-1:exon
so has part: feature:227399-228298:-1:exon

position:260229:-1
position: 260229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260229:-1:exon

position:259963:-1
position: 259963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

position:248637:-1
position: 248637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248779:-1
position: 248779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

position:245464:-1
position: 245464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245553:-1
position: 245553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

position:244481:-1
position: 244481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244648:-1
position: 244648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

position:244134:-1
position: 244134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244314:-1
position: 244314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

position:243158:-1
position: 243158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243319:-1
position: 243319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

position:241877:-1
position: 241877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241961:-1
position: 241961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

position:241628:-1
position: 241628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241726:-1
position: 241726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241127:-1:exon

position:241010:-1
position: 241010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241127:-1
position: 241127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

position:240764:-1
position: 240764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240923:-1
position: 240923
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

position:240536:-1
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reference: sequence
type: ReverseStrandPosition
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position:240654:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:239901:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

position:239246:-1
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reference: sequence
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position:239360:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

position:238516:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238659:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237948:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

position:237303:-1
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reference: sequence
type: ReverseStrandPosition
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position:237420:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

position:236189:-1
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reference: sequence
type: ReverseStrandPosition
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position:236345:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

position:235460:-1
position: 235460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235602:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

position:233163:-1
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reference: sequence
type: ReverseStrandPosition
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position:233337:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

position:232328:-1
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reference: sequence
type: ReverseStrandPosition
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position:232409:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

position:231912:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232073:-1
position: 232073
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

position:229892:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230109:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:229417-229536:-1:exon

position:229417:-1
position: 229417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229536:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:227399-228298:-1:exon

position:228298:-1
position: 228298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033136953.1
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(227399..228298,229412..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241127,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260229))
location: region:227399-260229:-1
so has part: feature:259963-260229:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
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so has part: feature:240536-240654:-1:exon
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so has part: feature:238516-238659:-1:exon
so has part: feature:237735-237948:-1:exon
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so has part: feature:229412-229536:-1:exon
so has part: feature:227399-228298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241127:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229412-229536:-1:exon

position:229412:-1
position: 229412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:227399-228298:-1:exon

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_033136954.1
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(229420..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241121,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260256))
location: region:229420-260256:-1
so has part: feature:259963-260256:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
so has part: feature:244134-244314:-1:exon
so has part: feature:243158-243319:-1:exon
so has part: feature:241877-241961:-1:exon
so has part: feature:241628-241726:-1:exon
so has part: feature:241010-241121:-1:exon
so has part: feature:240764-240923:-1:exon
so has part: feature:240536-240654:-1:exon
so has part: feature:239737-239901:-1:exon
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so has part: feature:236189-236345:-1:exon
so has part: feature:235460-235602:-1:exon
so has part: feature:233163-233337:-1:exon
so has part: feature:232328-232409:-1:exon
so has part: feature:231912-232073:-1:exon
so has part: feature:229892-230109:-1:exon
so has part: feature:229420-229536:-1:exon

position:229420:-1
position: 229420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241121:-1:exon

position:241121:-1
position: 241121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229420-229536:-1:exon

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_033136955.1
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(229420..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241118,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260229))
location: region:229420-260229:-1
so has part: feature:259963-260229:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
so has part: feature:244134-244314:-1:exon
so has part: feature:243158-243319:-1:exon
so has part: feature:241877-241961:-1:exon
so has part: feature:241628-241726:-1:exon
so has part: feature:241010-241118:-1:exon
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so has part: feature:239737-239901:-1:exon
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so has part: feature:237735-237948:-1:exon
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so has part: feature:235460-235602:-1:exon
so has part: feature:233163-233337:-1:exon
so has part: feature:232328-232409:-1:exon
so has part: feature:231912-232073:-1:exon
so has part: feature:229892-230109:-1:exon
so has part: feature:229420-229536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241118:-1:exon

position:241118:-1
position: 241118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229420-229536:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X3
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGGGGSGGASAQGNPGGVSAGGGGAGGPPSVALSPGQLDAQVNGPDGILQNGAVDDNVPKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGNPKGKTGRGGRQKNRFGIPGAGQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(229420..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241118,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260229))
location: region:229420-260229:-1
so has part: feature:259963-260229:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
so has part: feature:244134-244314:-1:exon
so has part: feature:243158-243319:-1:exon
so has part: feature:241877-241961:-1:exon
so has part: feature:241628-241726:-1:exon
so has part: feature:241010-241118:-1:exon
so has part: feature:240764-240923:-1:exon
so has part: feature:240536-240654:-1:exon
so has part: feature:239737-239901:-1:exon
so has part: feature:239246-239360:-1:exon
so has part: feature:238516-238659:-1:exon
so has part: feature:237735-237948:-1:exon
so has part: feature:237303-237420:-1:exon
so has part: feature:236189-236345:-1:exon
so has part: feature:235460-235602:-1:exon
so has part: feature:233163-233337:-1:exon
so has part: feature:232328-232409:-1:exon
so has part: feature:231912-232073:-1:exon
so has part: feature:229892-230109:-1:exon
so has part: feature:229420-229536:-1:exon

XP_032992846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229420-229536:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X2
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGGGGSGGASAQGNPGGVSAGGGGAGGPPSVALSPGQLDAQVNGPDGILQNGAVDDNVPKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDKDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGNPKGKTGRGGRQKNRFGIPGAGQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(229420..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241121,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260229))
location: region:229420-260229:-1
so has part: feature:259963-260229:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
so has part: feature:244134-244314:-1:exon
so has part: feature:243158-243319:-1:exon
so has part: feature:241877-241961:-1:exon
so has part: feature:241628-241726:-1:exon
so has part: feature:241010-241121:-1:exon
so has part: feature:240764-240923:-1:exon
so has part: feature:240536-240654:-1:exon
so has part: feature:239737-239901:-1:exon
so has part: feature:239246-239360:-1:exon
so has part: feature:238516-238659:-1:exon
so has part: feature:237735-237948:-1:exon
so has part: feature:237303-237420:-1:exon
so has part: feature:236189-236345:-1:exon
so has part: feature:235460-235602:-1:exon
so has part: feature:233163-233337:-1:exon
so has part: feature:232328-232409:-1:exon
so has part: feature:231912-232073:-1:exon
so has part: feature:229892-230109:-1:exon
so has part: feature:229420-229536:-1:exon

XP_032992845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229420-229536:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X1
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGGGGSGGASAQGNPGGVSAGGGGAGGPPSVALSPGQLDAQVNGPDGILQNGAVDDNVPKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDSFEDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGNPKGKTGRGGRQKNRFGIPGAGQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(229420..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241127,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260229))
location: region:229420-260229:-1
so has part: feature:259963-260229:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
so has part: feature:244134-244314:-1:exon
so has part: feature:243158-243319:-1:exon
so has part: feature:241877-241961:-1:exon
so has part: feature:241628-241726:-1:exon
so has part: feature:241010-241127:-1:exon
so has part: feature:240764-240923:-1:exon
so has part: feature:240536-240654:-1:exon
so has part: feature:239737-239901:-1:exon
so has part: feature:239246-239360:-1:exon
so has part: feature:238516-238659:-1:exon
so has part: feature:237735-237948:-1:exon
so has part: feature:237303-237420:-1:exon
so has part: feature:236189-236345:-1:exon
so has part: feature:235460-235602:-1:exon
so has part: feature:233163-233337:-1:exon
so has part: feature:232328-232409:-1:exon
so has part: feature:231912-232073:-1:exon
so has part: feature:229892-230109:-1:exon
so has part: feature:229420-229536:-1:exon

XP_032992843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241127:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229420-229536:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X1
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGGGGSGGASAQGNPGGVSAGGGGAGGPPSVALSPGQLDAQVNGPDGILQNGAVDDNVPKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDSFEDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGNPKGKTGRGGRQKNRFGIPGAGQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(229420..229536,229892..230109,231912..232073,232328..232409,233163..233337,235460..235602,236189..236345,237303..237420,237735..237948,238516..238659,239246..239360,239737..239901,240536..240654,240764..240923,241010..241127,241628..241726,241877..241961,243158..243319,244134..244314,244481..244648,245464..245553,248637..248779,259963..260229))
location: region:229420-260229:-1
so has part: feature:259963-260229:-1:exon
so has part: feature:248637-248779:-1:exon
so has part: feature:245464-245553:-1:exon
so has part: feature:244481-244648:-1:exon
so has part: feature:244134-244314:-1:exon
so has part: feature:243158-243319:-1:exon
so has part: feature:241877-241961:-1:exon
so has part: feature:241628-241726:-1:exon
so has part: feature:241010-241127:-1:exon
so has part: feature:240764-240923:-1:exon
so has part: feature:240536-240654:-1:exon
so has part: feature:239737-239901:-1:exon
so has part: feature:239246-239360:-1:exon
so has part: feature:238516-238659:-1:exon
so has part: feature:237735-237948:-1:exon
so has part: feature:237303-237420:-1:exon
so has part: feature:236189-236345:-1:exon
so has part: feature:235460-235602:-1:exon
so has part: feature:233163-233337:-1:exon
so has part: feature:232328-232409:-1:exon
so has part: feature:231912-232073:-1:exon
so has part: feature:229892-230109:-1:exon
so has part: feature:229420-229536:-1:exon

XP_032992844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259963-260229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248637-248779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245464-245553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244481-244648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244134-244314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243158-243319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241877-241961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241628-241726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241010-241127:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240764-240923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240536-240654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239737-239901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239246-239360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238516-238659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237735-237948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237303-237420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236189-236345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235460-235602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233163-233337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232328-232409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231912-232073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229892-230109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229420-229536:-1:exon

S1PR4
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: S1PR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296819..298343
location: region:296819-298343:1
so has part: feature:296819-298343:1:exon
subclass of: SO_0000010

117039675
type: Gene
SIO_000068: ncbigene

position:296819:1
position: 296819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298343:1
position: 298343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296819-298343:1:exon

S1PR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: S1PR4
product: sphingosine-1-phosphate receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136855.1
SIO_010081: S1PR4
subclass of: SO_0000673
so part of: S1PR4
location: 296819..298343
location: region:296819-298343:1
so has part: feature:296819-298343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296819-298343:1:exon

S1PR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: S1PR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine 1-phosphate receptor 4
translation: MTDMELFISTSSPSPWAALPTSVPEPRLASAHRPELCYPTTDANHVNIILYHYNFTGRMKNRRPQEDQMSVLKMVIVAASCLIILENLVVLVAIIRKVRTRRWVYSCLASITLSDLLAGTAYLLNLCLSGSRTFQLSPAMWFLREGVLFVALAASTFSLLVTAVERYSTMVKPIAEKESSKTTRLRGLLAFCWSLAILIGLLPLLGWNCICNVSRCSTLLPLYDKNYILFVVIMFSIILVGVVGLYASIYCWVQKSAQQTFSRCSRKRSLRLLKTVLVILCTFLICWTPLFILLLIDTFWGNTAWAPHKVFGWVLTLAVTNSLINPIIYSLGSKEVRRAVVELLCCCCIWAGVRGPRNCLVASDIHASSSTGSLRVRGSFRSPVAFSRRTREPLSSNSSVLSNETSGLHHTLD
SIO_010081: S1PR4
subclass of: SO_0000673
so part of: S1PR4
location: 297043..298284
location: region:297043-298284:1
so has part: feature:297043-298284:1:exon

XP_032992746.1
type: Protein
SIO_000068: ncbiprotein

position:297043:1
position: 297043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298284:1
position: 298284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297043-298284:1:exon

SHD
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SHD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(320312..348602)
location: region:320312-348602:-1
so has part: feature:320312-348602:-1:exon
subclass of: SO_0000010

117039572
type: Gene
SIO_000068: ncbigene

position:320312:-1
position: 320312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348602:-1
position: 348602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320312-348602:-1:exon

SHD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SHD
product: Src homology 2 domain containing transforming protein D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033136729.1
SIO_010081: SHD
subclass of: SO_0000673
so part of: SHD
location: complement(join(320312..320776,324857..324976,330275..330452,332505..332585,335612..335839,338833..338965,348109..348602))
location: region:320312-348602:-1
so has part: feature:348109-348602:-1:exon
so has part: feature:338833-338965:-1:exon
so has part: feature:335612-335839:-1:exon
so has part: feature:332505-332585:-1:exon
so has part: feature:330275-330452:-1:exon
so has part: feature:324857-324976:-1:exon
so has part: feature:320312-320776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348109-348602:-1:exon

position:348109:-1
position: 348109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338833-338965:-1:exon

position:338833:-1
position: 338833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338965:-1
position: 338965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335612-335839:-1:exon

position:335612:-1
position: 335612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335839:-1
position: 335839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332505-332585:-1:exon

position:332505:-1
position: 332505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332585:-1
position: 332585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330275-330452:-1:exon

position:330275:-1
position: 330275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330452:-1
position: 330452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:324857-324976:-1:exon

position:324857:-1
position: 324857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324976:-1
position: 324976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:320312-320776:-1:exon

position:320776:-1
position: 320776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SHD
product: Src homology 2 domain containing transforming protein D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033136728.1
SIO_010081: SHD
subclass of: SO_0000673
so part of: SHD
location: complement(join(320312..320776,324857..324976,330275..330452,332505..332588,335612..335839,338833..338965,348109..348602))
location: region:320312-348602:-1
so has part: feature:348109-348602:-1:exon
so has part: feature:338833-338965:-1:exon
so has part: feature:335612-335839:-1:exon
so has part: feature:332505-332588:-1:exon
so has part: feature:330275-330452:-1:exon
so has part: feature:324857-324976:-1:exon
so has part: feature:320312-320776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348109-348602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338833-338965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335612-335839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332505-332588:-1:exon

position:332588:-1
position: 332588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330275-330452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324857-324976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320312-320776:-1:exon

SHD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SHD
product: Src homology 2 domain containing transforming protein D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033136731.1
SIO_010081: SHD
subclass of: SO_0000673
so part of: SHD
location: complement(join(320313..320776,324857..324976,330275..330452,335612..335839,338833..338965,348109..348602))
location: region:320313-348602:-1
so has part: feature:348109-348602:-1:exon
so has part: feature:338833-338965:-1:exon
so has part: feature:335612-335839:-1:exon
so has part: feature:330275-330452:-1:exon
so has part: feature:324857-324976:-1:exon
so has part: feature:320313-320776:-1:exon

position:320313:-1
position: 320313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348109-348602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338833-338965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335612-335839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330275-330452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324857-324976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320313-320776:-1:exon

SHD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SHD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein D isoform X3
translation: MAKWFKDYLSFGSRRSPPQPPKPDYTESEILKAYRAQKSLDFEDPYEDGNGKPDPDPEGSPNKGVAAAAAAAASAGISLEGKYGSPKHRLIKVEASDLNRSKALLTAEEGPTQPDQAPGESEYSDPFDAQREPKEEEEKEEAESENNGYMEPYDAQKVVVDFQWKSDRDEQRVKKSRIGLQLYDTPYEEKEPEADPEGRPTSKPRESRLPQDDERPADEYDQPWEWKKNHISRAFAVQFETPDWEWTSLAAASSTHKEHWRPHLTGSSKFVRSQSPEHSLPAAERIDPSLPLENQAWFHGTISRADAESLLTLCKEGSYLVRNSETSRNDYSLSLRSSQGFMHMKFTRTKENKYVLGQNSAPFDSVPEVIHFYTAQELPVKGAEHLSLLYPVAVQTL
SIO_010081: SHD
subclass of: SO_0000673
so part of: SHD
location: complement(join(320590..320776,324857..324976,330275..330452,335612..335839,338833..338965,348109..348456))
location: region:320590-348456:-1
so has part: feature:348109-348456:-1:exon
so has part: feature:338833-338965:-1:exon
so has part: feature:335612-335839:-1:exon
so has part: feature:330275-330452:-1:exon
so has part: feature:324857-324976:-1:exon
so has part: feature:320590-320776:-1:exon

XP_032992622.1
type: Protein
SIO_000068: ncbiprotein

position:320590:-1
position: 320590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348456:-1
position: 348456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348109-348456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338833-338965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335612-335839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330275-330452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324857-324976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320590-320776:-1:exon

SHD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SHD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein D isoform X2
translation: MAKWFKDYLSFGSRRSPPQPPKPDYTESEILKAYRAQKSLDFEDPYEDGNGKPDPDPEGSPNKGVAAAAAAAASAGISLEGKYGSPKHRLIKVEASDLNRSKALLTAEEGPTQPDQAPGESEYSDPFDAQREPKEEEEKEEAESENNGYMEPYDAQKVVVDFQWKSDRDEQRVKKSRIGLQLYDTPYEEKEPEADPEGRPTSKPRESRLPQDDERPADEYDQPWEWKKNHISRAFADIKENKVLPWPPPVGQLTGTEESLDPEVQFETPDWEWTSLAAASSTHKEHWRPHLTGSSKFVRSQSPEHSLPAAERIDPSLPLENQAWFHGTISRADAESLLTLCKEGSYLVRNSETSRNDYSLSLRSSQGFMHMKFTRTKENKYVLGQNSAPFDSVPEVIHFYTAQELPVKGAEHLSLLYPVAVQTL
SIO_010081: SHD
subclass of: SO_0000673
so part of: SHD
location: complement(join(320590..320776,324857..324976,330275..330452,332505..332585,335612..335839,338833..338965,348109..348456))
location: region:320590-348456:-1
so has part: feature:348109-348456:-1:exon
so has part: feature:338833-338965:-1:exon
so has part: feature:335612-335839:-1:exon
so has part: feature:332505-332585:-1:exon
so has part: feature:330275-330452:-1:exon
so has part: feature:324857-324976:-1:exon
so has part: feature:320590-320776:-1:exon

XP_032992620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348109-348456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338833-338965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335612-335839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332505-332585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330275-330452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324857-324976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320590-320776:-1:exon

SHD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SHD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein D isoform X1
translation: MAKWFKDYLSFGSRRSPPQPPKPDYTESEILKAYRAQKSLDFEDPYEDGNGKPDPDPEGSPNKGVAAAAAAAASAGISLEGKYGSPKHRLIKVEASDLNRSKALLTAEEGPTQPDQAPGESEYSDPFDAQREPKEEEEKEEAESENNGYMEPYDAQKVVVDFQWKSDRDEQRVKKSRIGLQLYDTPYEEKEPEADPEGRPTSKPRESRLPQDDERPADEYDQPWEWKKNHISRAFAVDIKENKVLPWPPPVGQLTGTEESLDPEVQFETPDWEWTSLAAASSTHKEHWRPHLTGSSKFVRSQSPEHSLPAAERIDPSLPLENQAWFHGTISRADAESLLTLCKEGSYLVRNSETSRNDYSLSLRSSQGFMHMKFTRTKENKYVLGQNSAPFDSVPEVIHFYTAQELPVKGAEHLSLLYPVAVQTL
SIO_010081: SHD
subclass of: SO_0000673
so part of: SHD
location: complement(join(320590..320776,324857..324976,330275..330452,332505..332588,335612..335839,338833..338965,348109..348456))
location: region:320590-348456:-1
so has part: feature:348109-348456:-1:exon
so has part: feature:338833-338965:-1:exon
so has part: feature:335612-335839:-1:exon
so has part: feature:332505-332588:-1:exon
so has part: feature:330275-330452:-1:exon
so has part: feature:324857-324976:-1:exon
so has part: feature:320590-320776:-1:exon

XP_032992619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348109-348456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338833-338965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335612-335839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332505-332588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330275-330452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324857-324976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320590-320776:-1:exon

YJU2
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: YJU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(376595..388998)
location: region:376595-388998:-1
so has part: feature:376595-388998:-1:exon
subclass of: SO_0000010

117039537
type: Gene
SIO_000068: ncbigene

position:376595:-1
position: 376595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388998:-1
position: 388998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376595-388998:-1:exon

YJU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: YJU2
product: YJU2 splicing factor homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033136687.1
SIO_010081: YJU2
subclass of: SO_0000673
so part of: YJU2
location: complement(join(376595..377803,379607..379769,381212..381335,382333..382514,382665..382799,384108..384252,385410..385510,388849..388998))
location: region:376595-388998:-1
so has part: feature:388849-388998:-1:exon
so has part: feature:385410-385510:-1:exon
so has part: feature:384108-384252:-1:exon
so has part: feature:382665-382799:-1:exon
so has part: feature:382333-382514:-1:exon
so has part: feature:381212-381335:-1:exon
so has part: feature:379607-379769:-1:exon
so has part: feature:376595-377803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388849-388998:-1:exon

position:388849:-1
position: 388849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385410-385510:-1:exon

position:385410:-1
position: 385410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385510:-1
position: 385510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384108-384252:-1:exon

position:384108:-1
position: 384108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384252:-1
position: 384252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:382665-382799:-1:exon

position:382665:-1
position: 382665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382799:-1
position: 382799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382333-382514:-1:exon

position:382333:-1
position: 382333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382514:-1
position: 382514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:381212-381335:-1:exon

position:381212:-1
position: 381212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381335:-1
position: 381335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:379607-379769:-1:exon

position:379607:-1
position: 379607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379769:-1
position: 379769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376595-377803:-1:exon

position:377803:-1
position: 377803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YJU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: YJU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor YJU2
translation: MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNESYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGATRNFQAEKLLEEEEKRLQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKELNQRQAHVDFESMLQQYKDYEEQQKERELEEDEQETKTMLEQAQSRRLLQDSDSEGEDSASRPAKPFAKAKPTDILQEDSEPQAKKLKVESWERSIGKLSSKVKLSGLVTAKRKPVSSAANGADSGDAPPGTGAGNTSSTSGGASLASVLKAGASSLSLLGAYSDSEDSKSD
SIO_010081: YJU2
subclass of: SO_0000673
so part of: YJU2
location: complement(join(377682..377803,379607..379769,381212..381335,382333..382514,382665..382799,384108..384252,385410..385510,388849..388872))
location: region:377682-388872:-1
so has part: feature:388849-388872:-1:exon
so has part: feature:385410-385510:-1:exon
so has part: feature:384108-384252:-1:exon
so has part: feature:382665-382799:-1:exon
so has part: feature:382333-382514:-1:exon
so has part: feature:381212-381335:-1:exon
so has part: feature:379607-379769:-1:exon
so has part: feature:377682-377803:-1:exon

XP_032992578.1
type: Protein
SIO_000068: ncbiprotein

position:377682:-1
position: 377682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388872:-1
position: 388872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388849-388872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385410-385510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384108-384252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:382665-382799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382333-382514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381212-381335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379607-379769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377682-377803:-1:exon

EBI3
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: EBI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(394892..406241)
location: region:394892-406241:-1
so has part: feature:394892-406241:-1:exon
subclass of: SO_0000010

117039672
type: Gene
SIO_000068: ncbigene

position:394892:-1
position: 394892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406241:-1
position: 406241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394892-406241:-1:exon

EBI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: EBI3
product: Epstein-Barr virus induced 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033136854.1
SIO_010081: EBI3
subclass of: SO_0000673
so part of: EBI3
location: complement(join(394892..395406,396653..396816,397978..398150,399247..399361,401798..402043,404815..404950,406185..406241))
location: region:394892-406241:-1
so has part: feature:406185-406241:-1:exon
so has part: feature:404815-404950:-1:exon
so has part: feature:401798-402043:-1:exon
so has part: feature:399247-399361:-1:exon
so has part: feature:397978-398150:-1:exon
so has part: feature:396653-396816:-1:exon
so has part: feature:394892-395406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406185-406241:-1:exon

position:406185:-1
position: 406185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404815-404950:-1:exon

position:404815:-1
position: 404815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404950:-1
position: 404950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401798-402043:-1:exon

position:401798:-1
position: 401798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402043:-1
position: 402043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399247-399361:-1:exon

position:399247:-1
position: 399247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399361:-1
position: 399361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397978-398150:-1:exon

position:397978:-1
position: 397978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398150:-1
position: 398150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:396653-396816:-1:exon

position:396653:-1
position: 396653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396816:-1
position: 396816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:394892-395406:-1:exon

position:395406:-1
position: 395406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EBI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: EBI3
product: Epstein-Barr virus induced 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033136853.1
SIO_010081: EBI3
subclass of: SO_0000673
so part of: EBI3
location: complement(join(394892..395406,396653..396816,397978..398150,399247..399361,401798..402043,404815..404946,406185..406239))
location: region:394892-406239:-1
so has part: feature:406185-406239:-1:exon
so has part: feature:404815-404946:-1:exon
so has part: feature:401798-402043:-1:exon
so has part: feature:399247-399361:-1:exon
so has part: feature:397978-398150:-1:exon
so has part: feature:396653-396816:-1:exon
so has part: feature:394892-395406:-1:exon

position:406239:-1
position: 406239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406185-406239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404815-404946:-1:exon

position:404946:-1
position: 404946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401798-402043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399247-399361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397978-398150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396653-396816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394892-395406:-1:exon

EBI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: EBI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-27 subunit beta
translation: MQRILLTITFVLSPGFPSQEDIVWFNGSKGVPIEQQYASLGASEVLLHCPVPEGNSMVGWKMSSTLHGILKAVRRDGSLVLQNASLAQNGEYSCHDLTTGRLLRRIHLKLGYPPDNPLVWCWSTTYPAINCSWRLETKTHLPTFFSSTYRLGMGGEVKECLQATTVANSCSIDNVQMFSINPYVLNVTAVNPLGTASTHYYFFQNEILKPDPPEDLTVSQIPGQRKKILLVWKPPSSWKFPEYFPLKYLIRYSRDGTNVSKTTRPTEQTSFVLTGIRPGVTYHAQVAAKDFLDHGEYSAWSPAASGAAWMPE
SIO_010081: EBI3
subclass of: SO_0000673
so part of: EBI3
location: complement(join(395254..395406,396653..396816,397978..398150,399247..399361,401798..402043,404815..404902))
location: region:395254-404902:-1
so has part: feature:404815-404902:-1:exon
so has part: feature:401798-402043:-1:exon
so has part: feature:399247-399361:-1:exon
so has part: feature:397978-398150:-1:exon
so has part: feature:396653-396816:-1:exon
so has part: feature:395254-395406:-1:exon

XP_032992744.1
type: Protein
SIO_000068: ncbiprotein

position:395254:-1
position: 395254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404902:-1
position: 404902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404815-404902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401798-402043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399247-399361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397978-398150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396653-396816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395254-395406:-1:exon

EBI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: EBI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-27 subunit beta
translation: MQRILLTITFVLSPGFPSQEDIVWFNGSKGVPIEQQYASLGASEVLLHCPVPEGNSMVGWKMSSTLHGILKAVRRDGSLVLQNASLAQNGEYSCHDLTTGRLLRRIHLKLGYPPDNPLVWCWSTTYPAINCSWRLETKTHLPTFFSSTYRLGMGGEVKECLQATTVANSCSIDNVQMFSINPYVLNVTAVNPLGTASTHYYFFQNEILKPDPPEDLTVSQIPGQRKKILLVWKPPSSWKFPEYFPLKYLIRYSRDGTNVSKTTRPTEQTSFVLTGIRPGVTYHAQVAAKDFLDHGEYSAWSPAASGAAWMPE
SIO_010081: EBI3
subclass of: SO_0000673
so part of: EBI3
location: complement(join(395254..395406,396653..396816,397978..398150,399247..399361,401798..402043,404815..404902))
location: region:395254-404902:-1
so has part: feature:404815-404902:-1:exon
so has part: feature:401798-402043:-1:exon
so has part: feature:399247-399361:-1:exon
so has part: feature:397978-398150:-1:exon
so has part: feature:396653-396816:-1:exon
so has part: feature:395254-395406:-1:exon

XP_032992745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404815-404902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401798-402043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399247-399361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397978-398150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396653-396816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395254-395406:-1:exon

LOC117039593
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(408715..429876)
location: region:408715-429876:-1
so has part: feature:408715-429876:-1:exon
subclass of: SO_0000010

117039593
type: Gene
SIO_000068: ncbigene

position:408715:-1
position: 408715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429876:-1
position: 429876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408715-429876:-1:exon

LOC117039593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039593
product: cathepsin L1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033136757.1
SIO_010081: LOC117039593
subclass of: SO_0000673
so part of: LOC117039593
location: complement(join(408715..408845,412564..412678,414918..415086,418940..419164,420226..420384,421862..421972,425634..425770,429838..429876))
location: region:408715-429876:-1
so has part: feature:429838-429876:-1:exon
so has part: feature:425634-425770:-1:exon
so has part: feature:421862-421972:-1:exon
so has part: feature:420226-420384:-1:exon
so has part: feature:418940-419164:-1:exon
so has part: feature:414918-415086:-1:exon
so has part: feature:412564-412678:-1:exon
so has part: feature:408715-408845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429838-429876:-1:exon

position:429838:-1
position: 429838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425634-425770:-1:exon

position:425634:-1
position: 425634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425770:-1
position: 425770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421862-421972:-1:exon

position:421862:-1
position: 421862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421972:-1
position: 421972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420226-420384:-1:exon

position:420226:-1
position: 420226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420384:-1
position: 420384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418940-419164:-1:exon

position:418940:-1
position: 418940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419164:-1
position: 419164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:414918-415086:-1:exon

position:414918:-1
position: 414918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415086:-1
position: 415086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:412564-412678:-1:exon

position:412564:-1
position: 412564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412678:-1
position: 412678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:408715-408845:-1:exon

position:408845:-1
position: 408845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin L1-like
translation: MSSVSTVPLILLMLLGTPASALDWALEGEWKGWKEVHSKQYLKEEEAFRRAVWEKNLRRIEQHNQEGNSFQLAMNHLGDLTDEEFNKMLSSFRSDLANQSGKKVALFQESATLETPKEVDWRTKGYVTPVKNQGHCGSCWAFSATGALEGLRFNRTGKLIPLSEQNLIDCSWKLGNQGCHGGYITQAFEYVRENGGINSETSYPYLEKDGSMCSYNSQDRAANCTSVVVVPVGSEVALEQAVATIGPVSVAVDSRSFYFHFYKSGVFDSASCTQLVSHAMLVVGYGMLQDGGNNTAYWILKNSWSEKWGEQGYMRLVKGAGNHCGIANQASYPAL
SIO_010081: LOC117039593
subclass of: SO_0000673
so part of: LOC117039593
location: complement(join(408746..408845,412564..412678,414918..415086,418940..419164,420226..420384,421862..421972,425634..425762))
location: region:408746-425762:-1
so has part: feature:425634-425762:-1:exon
so has part: feature:421862-421972:-1:exon
so has part: feature:420226-420384:-1:exon
so has part: feature:418940-419164:-1:exon
so has part: feature:414918-415086:-1:exon
so has part: feature:412564-412678:-1:exon
so has part: feature:408746-408845:-1:exon

XP_032992648.1
type: Protein
SIO_000068: ncbiprotein

position:408746:-1
position: 408746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425762:-1
position: 425762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425634-425762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421862-421972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420226-420384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418940-419164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:414918-415086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:412564-412678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:408746-408845:-1:exon

LOC117039594
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449245..458402)
location: region:449245-458402:-1
so has part: feature:449245-458402:-1:exon
subclass of: SO_0000010

117039594
type: Gene
SIO_000068: ncbigene

position:449245:-1
position: 449245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458402:-1
position: 458402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449245-458402:-1:exon

LOC117039594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039594
product: cathepsin L1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033136758.1
SIO_010081: LOC117039594
subclass of: SO_0000673
so part of: LOC117039594
location: complement(join(449245..449429,452059..452158,453732..453891,454827..455051,456091..456249,457185..457310,458286..458402))
location: region:449245-458402:-1
so has part: feature:458286-458402:-1:exon
so has part: feature:457185-457310:-1:exon
so has part: feature:456091-456249:-1:exon
so has part: feature:454827-455051:-1:exon
so has part: feature:453732-453891:-1:exon
so has part: feature:452059-452158:-1:exon
so has part: feature:449245-449429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458286-458402:-1:exon

position:458286:-1
position: 458286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457185-457310:-1:exon

position:457185:-1
position: 457185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457310:-1
position: 457310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456091-456249:-1:exon

position:456091:-1
position: 456091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456249:-1
position: 456249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454827-455051:-1:exon

position:454827:-1
position: 454827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455051:-1
position: 455051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:453732-453891:-1:exon

position:453732:-1
position: 453732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453891:-1
position: 453891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:452059-452158:-1:exon

position:452059:-1
position: 452059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452158:-1
position: 452158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449245-449429:-1:exon

position:449429:-1
position: 449429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039594
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin L1-like
translation: MTVLVLLRTFTMARDPALDEAWKDWKRTHNKIYRERNAEDFRRTVWEDNLQTIEEHNREAAQGKHTFQMALNQFSDLTKEEFKEKLNGLRPDLPRQHGGGAILYEKSGPLVLPESVDWRNTGCVTPVKDQGSCGSCWAFAAVGALESLHCIQTRKLTPLSEQNLVDCAWPQGNYGCNGGWPSRAFQYVLQNNGLNSERIYPYTGQDGRCNFQNSDRAVRIRGWVDLPEDDEGALEQAVALYEPVTVAVDASNFNLYGSGIFDYPCGTNLNHAVLAVGYGVQNGVPYWIIKNSWGTNWGENGYMRMRRGVNLCGVARVASYPV
SIO_010081: LOC117039594
subclass of: SO_0000673
so part of: LOC117039594
location: complement(join(449336..449429,452059..452158,453732..453891,454827..455051,456091..456249,457185..457310,458286..458390))
location: region:449336-458390:-1
so has part: feature:458286-458390:-1:exon
so has part: feature:457185-457310:-1:exon
so has part: feature:456091-456249:-1:exon
so has part: feature:454827-455051:-1:exon
so has part: feature:453732-453891:-1:exon
so has part: feature:452059-452158:-1:exon
so has part: feature:449336-449429:-1:exon

XP_032992649.1
type: Protein
SIO_000068: ncbiprotein

position:449336:-1
position: 449336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458390:-1
position: 458390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458286-458390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457185-457310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456091-456249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454827-455051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453732-453891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:452059-452158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449336-449429:-1:exon

SLC5A5
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SLC5A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(497245..520371)
location: region:497245-520371:-1
so has part: feature:497245-520371:-1:exon
subclass of: SO_0000010

117039620
type: Gene
SIO_000068: ncbigene

position:497245:-1
position: 497245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520371:-1
position: 520371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497245-520371:-1:exon

SLC5A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SLC5A5
product: solute carrier family 5 member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033136796.1
SIO_010081: SLC5A5
subclass of: SO_0000673
so part of: SLC5A5
location: complement(join(497245..497581,498115..498218,498638..498741,499829..500034,500308..500394,502469..502539,503007..503119,504368..504456,504912..505041,507469..507609,507830..507984,509194..509261,509597..509648,510815..510880,519986..520371))
location: region:497245-520371:-1
so has part: feature:519986-520371:-1:exon
so has part: feature:510815-510880:-1:exon
so has part: feature:509597-509648:-1:exon
so has part: feature:509194-509261:-1:exon
so has part: feature:507830-507984:-1:exon
so has part: feature:507469-507609:-1:exon
so has part: feature:504912-505041:-1:exon
so has part: feature:504368-504456:-1:exon
so has part: feature:503007-503119:-1:exon
so has part: feature:502469-502539:-1:exon
so has part: feature:500308-500394:-1:exon
so has part: feature:499829-500034:-1:exon
so has part: feature:498638-498741:-1:exon
so has part: feature:498115-498218:-1:exon
so has part: feature:497245-497581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519986-520371:-1:exon

position:519986:-1
position: 519986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510815-510880:-1:exon

position:510815:-1
position: 510815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510880:-1
position: 510880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:509597-509648:-1:exon

position:509597:-1
position: 509597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509648:-1
position: 509648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:509194-509261:-1:exon

position:509194:-1
position: 509194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509261:-1
position: 509261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507830-507984:-1:exon

position:507830:-1
position: 507830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507984:-1
position: 507984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:507469-507609:-1:exon

position:507469:-1
position: 507469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507609:-1
position: 507609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:504912-505041:-1:exon

position:504912:-1
position: 504912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505041:-1
position: 505041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:504368-504456:-1:exon

position:504368:-1
position: 504368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504456:-1
position: 504456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503007-503119:-1:exon

position:503007:-1
position: 503007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503119:-1
position: 503119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:502469-502539:-1:exon

position:502469:-1
position: 502469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502539:-1
position: 502539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:500308-500394:-1:exon

position:500308:-1
position: 500308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500394:-1
position: 500394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:499829-500034:-1:exon

position:499829:-1
position: 499829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500034:-1
position: 500034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:498638-498741:-1:exon

position:498638:-1
position: 498638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498741:-1
position: 498741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:498115-498218:-1:exon

position:498115:-1
position: 498115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498218:-1
position: 498218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:497245-497581:-1:exon

position:497581:-1
position: 497581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC5A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SLC5A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/iodide cotransporter
translation: MALGGGLDVFRAEMLTFSLWDYGVFALMLLISTSIGLFYALSKGGQKTSEDFFTGGRQMSAIPVGLSLSASFMSAIQVLGVPAEAYRYGVKFLWMCLGQLLNTLLTAYLFLPVFYRLGLTSTYEYLEMRFSKAVRLCGTIQYIIATMLYTGIVIYAPALILNQVTGLDIWASLLSTGIICTFYTTIGGMKAVIWTDVFQVVVMLSGFVAILIQGTILVGSPAQVLAIAYNNSRINFNDFNLDPRSRYTFWTFIFGGTMVWLSMYGVNQAQVQRYVACKTEREAKLALLVNQVGLFFIVSSAVGCGIVMFTLYKDCDPLLAGYISAPDQYMPYLVLDIFEKYPGVPGLFLACAYSGTLSTASTSINAMAAVTVEDLIKPNLPNLSPRKLTLISKGLSLIYGTSCITVAALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMFIPACNTVGVLAGLLVGFALSFWVAVGGTLYPPSATTMGVLPSYGDLCPLYNSSEGANATIVLGPLPPRNITEVADRSAIADDFYAISYLYYGALGTLTTVVIGVLASCLTGPAKRSSKKPGVLWWDVMKQTAMVSPEGLKKPFTKDAGNSPDLQKKAFGSTSLVPSFLAEEKTLLAKEEKASSEASEENLCACNAFDSSYFHQLRETNV
SIO_010081: SLC5A5
subclass of: SO_0000673
so part of: SLC5A5
location: complement(join(497387..497581,498115..498218,498638..498741,499829..500034,500308..500394,502469..502539,503007..503119,504368..504456,504912..505041,507469..507609,507830..507984,509194..509261,509597..509648,510815..510880,519986..520357))
location: region:497387-520357:-1
so has part: feature:519986-520357:-1:exon
so has part: feature:510815-510880:-1:exon
so has part: feature:509597-509648:-1:exon
so has part: feature:509194-509261:-1:exon
so has part: feature:507830-507984:-1:exon
so has part: feature:507469-507609:-1:exon
so has part: feature:504912-505041:-1:exon
so has part: feature:504368-504456:-1:exon
so has part: feature:503007-503119:-1:exon
so has part: feature:502469-502539:-1:exon
so has part: feature:500308-500394:-1:exon
so has part: feature:499829-500034:-1:exon
so has part: feature:498638-498741:-1:exon
so has part: feature:498115-498218:-1:exon
so has part: feature:497387-497581:-1:exon

XP_032992687.1
type: Protein
SIO_000068: ncbiprotein

position:497387:-1
position: 497387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520357:-1
position: 520357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519986-520357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510815-510880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509597-509648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509194-509261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507830-507984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507469-507609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:504912-505041:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:504368-504456:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503007-503119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:502469-502539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500308-500394:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:499829-500034:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498638-498741:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:498115-498218:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:497387-497581:-1:exon

JAK3
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: JAK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 551086..572388
location: region:551086-572388:1
so has part: feature:551086-572388:1:exon
subclass of: SO_0000010

117039575
type: Gene
SIO_000068: ncbigene

position:551086:1
position: 551086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572388:1
position: 572388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551086-572388:1:exon

JAK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: JAK3
product: Janus kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136736.1
SIO_010081: JAK3
subclass of: SO_0000673
so part of: JAK3
location: join(551086..551295,551561..551684,551957..552068,552240..552385,553152..553443,554091..554213,554909..555066,557105..557216,558368..558554,558731..558855,559219..559383,560374..560458,561859..561992,562773..562911,563395..563546,565169..565319,565845..565969,566614..566803,567554..567678,568019..568191,569444..569561,570816..570926,571996..572115,572293..572388)
location: region:551086-572388:1
so has part: feature:551086-551295:1:exon
so has part: feature:551561-551684:1:exon
so has part: feature:551957-552068:1:exon
so has part: feature:552240-552385:1:exon
so has part: feature:553152-553443:1:exon
so has part: feature:554091-554213:1:exon
so has part: feature:554909-555066:1:exon
so has part: feature:557105-557216:1:exon
so has part: feature:558368-558554:1:exon
so has part: feature:558731-558855:1:exon
so has part: feature:559219-559383:1:exon
so has part: feature:560374-560458:1:exon
so has part: feature:561859-561992:1:exon
so has part: feature:562773-562911:1:exon
so has part: feature:563395-563546:1:exon
so has part: feature:565169-565319:1:exon
so has part: feature:565845-565969:1:exon
so has part: feature:566614-566803:1:exon
so has part: feature:567554-567678:1:exon
so has part: feature:568019-568191:1:exon
so has part: feature:569444-569561:1:exon
so has part: feature:570816-570926:1:exon
so has part: feature:571996-572115:1:exon
so has part: feature:572293-572388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551086-551295:1:exon

position:551295:1
position: 551295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551561-551684:1:exon

position:551561:1
position: 551561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551684:1
position: 551684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551957-552068:1:exon

position:551957:1
position: 551957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552068:1
position: 552068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552240-552385:1:exon

position:552240:1
position: 552240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552385:1
position: 552385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:553152-553443:1:exon

position:553152:1
position: 553152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553443:1
position: 553443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554091-554213:1:exon

position:554091:1
position: 554091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554213:1
position: 554213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:554909-555066:1:exon

position:554909:1
position: 554909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555066:1
position: 555066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557105-557216:1:exon

position:557105:1
position: 557105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557216:1
position: 557216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:558368-558554:1:exon

position:558368:1
position: 558368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558554:1
position: 558554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:558731-558855:1:exon

position:558731:1
position: 558731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558855:1
position: 558855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:559219-559383:1:exon

position:559219:1
position: 559219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559383:1
position: 559383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:560374-560458:1:exon

position:560374:1
position: 560374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560458:1
position: 560458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:561859-561992:1:exon

position:561859:1
position: 561859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561992:1
position: 561992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:562773-562911:1:exon

position:562773:1
position: 562773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562911:1
position: 562911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:563395-563546:1:exon

position:563395:1
position: 563395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563546:1
position: 563546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:565169-565319:1:exon

position:565169:1
position: 565169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565319:1
position: 565319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:565845-565969:1:exon

position:565845:1
position: 565845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565969:1
position: 565969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:566614-566803:1:exon

position:566614:1
position: 566614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566803:1
position: 566803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:567554-567678:1:exon

position:567554:1
position: 567554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567678:1
position: 567678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:568019-568191:1:exon

position:568019:1
position: 568019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568191:1
position: 568191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:569444-569561:1:exon

position:569444:1
position: 569444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569561:1
position: 569561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:570816-570926:1:exon

position:570816:1
position: 570816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570926:1
position: 570926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:571996-572115:1:exon

position:571996:1
position: 571996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572115:1
position: 572115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:572293-572388:1:exon

position:572293:1
position: 572293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: JAK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase JAK3
translation: MPPVKEEETLLIGNRSSNLSSSKTDGLQVYLYHQLNVAPSASDSAGTLNFTLGEYTAEELCITAAKACGILPVCHSLFALAREDLSGWYAPSHVFTVDESFSQVLLYRIRFFFPNWFGSQKSFRCGLASDQVSPVLDYPTIDYLFAQSRSDFISGREEISLTMENQETCLGLAVLDMLRMSKERKRSLEEIFQSISYKLCLPEQMRLQLQAQNFVTRKRIRRQFGQLLHKVSSLQTEVRFLKLKYLMELKGLQGATTEETFQAWVPMQAATGSAWTIHVSGEKGILTSHSGTKGTHLFCDFPEIADITIKQSIRDGQPVKSRLVSMTKTDSRVLEMEFGSLADALSFVSLVDGYFRLTVDAQHYFCLEVAPARLLEDLENRCHGPITSEFAQNRLKMSQNEGVVHILRRSPEDFDSYLLTICIKTDIGKDFKSLLIQKGSDGTFSTSGVAKKFCSLQEMLGVCQRFSLQADGATIQLGPQRPPQPKEKSNLLIVRGGTSHQLPRSPAASRRAVSQMMFPKIQAENLVQCENLGQGTFTRIYRGFKRDPKESREEEEEEEDDSRGRQMEVAMKVLDVAHCSWAEPFLEAASMLGQLSHKHLVLLHGVCVGEESVMVQEYVRCGALDSYLRRNQASGKVTATWKLHVAKQLAYALNFLEDKAMVHGNLSAKKVLLAREGDAASGCLPFVKLSDPGVSAAVLPKDLLTHRIPWVAPECLEDPKNLAPESDKWGFGATLWEIFNGGNMPMRLMEPERKLKFYQDRQQLPALKWAELANLVAPCLDYDPRKRPSFRSILRDLNEIITSDYELLSDLPTDSTPGGYVDVSLWQDPTLFEERHLKYISVLGKGNFGSVELCRYDPLDDSTGELVAVKRLQQSTSEHRADFEREIAILRSLHHDFVVAYRGVCCNRGRNSLRLVMEYLPNGCLRNYLQKNGERLDLRKLLLYAWQVCKGMDYLGSQRYIHRDLATRNILVENENHVKIGDFGLAKILPQDKEYYVVREPGQSPIFWYAPESLSDNVFSQESDVWSFGVVLYELFTYGSKSCSPSEEFLRMLGHSNPPMIVCQLLELLKQSKRLPSPPNCPAEVYALMQSCWSFSPAQRPPFCKLAPQIEALRSSRCKVRG
SIO_010081: JAK3
subclass of: SO_0000673
so part of: JAK3
location: join(551091..551295,551561..551684,551957..552068,552240..552385,553152..553443,554091..554213,554909..555066,557105..557216,558368..558554,558731..558855,559219..559383,560374..560458,561859..561992,562773..562911,563395..563546,565169..565319,565845..565969,566614..566803,567554..567678,568019..568191,569444..569561,570816..570926,571996..572112)
location: region:551091-572112:1
so has part: feature:551091-551295:1:exon
so has part: feature:551561-551684:1:exon
so has part: feature:551957-552068:1:exon
so has part: feature:552240-552385:1:exon
so has part: feature:553152-553443:1:exon
so has part: feature:554091-554213:1:exon
so has part: feature:554909-555066:1:exon
so has part: feature:557105-557216:1:exon
so has part: feature:558368-558554:1:exon
so has part: feature:558731-558855:1:exon
so has part: feature:559219-559383:1:exon
so has part: feature:560374-560458:1:exon
so has part: feature:561859-561992:1:exon
so has part: feature:562773-562911:1:exon
so has part: feature:563395-563546:1:exon
so has part: feature:565169-565319:1:exon
so has part: feature:565845-565969:1:exon
so has part: feature:566614-566803:1:exon
so has part: feature:567554-567678:1:exon
so has part: feature:568019-568191:1:exon
so has part: feature:569444-569561:1:exon
so has part: feature:570816-570926:1:exon
so has part: feature:571996-572112:1:exon

XP_032992627.1
type: Protein
SIO_000068: ncbiprotein

position:551091:1
position: 551091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572112:1
position: 572112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551091-551295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551561-551684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551957-552068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552240-552385:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:553152-553443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554091-554213:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554909-555066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557105-557216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558368-558554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558731-558855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:559219-559383:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:560374-560458:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:561859-561992:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562773-562911:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:563395-563546:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:565169-565319:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:565845-565969:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:566614-566803:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:567554-567678:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568019-568191:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:569444-569561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:570816-570926:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:571996-572112:1:exon

B3GNT3
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: B3GNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(574042..588734)
location: region:574042-588734:-1
so has part: feature:574042-588734:-1:exon
subclass of: SO_0000010

117039623
type: Gene
SIO_000068: ncbigene

position:574042:-1
position: 574042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588734:-1
position: 588734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574042-588734:-1:exon

B3GNT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: B3GNT3
product: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033136801.1
SIO_010081: B3GNT3
subclass of: SO_0000673
so part of: B3GNT3
location: complement(join(574042..575659,588718..588734))
location: region:574042-588734:-1
so has part: feature:588718-588734:-1:exon
so has part: feature:574042-575659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588718-588734:-1:exon

position:588718:-1
position: 588718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574042-575659:-1:exon

position:575659:-1
position: 575659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B3GNT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: B3GNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3
translation: MSRRWCYKVEAAVLGVVGFMGLFFLLQTDEDPAVSTEPRAAIPSPPTTAATTQPWHSPAAECRENVSVASVPGFAKLPGHIQDFLRYKHCKAFPLLLDLPEKCGRPEFSHEVFLLLAIKSSPGNYERREIIRKTWGHERTFEGVHIRRVFLAGVPGNARDARKLGRLLRLETEEHGDILQWGFQDSFFNLTLKQVLFHAWMEARCPGVRFVFNGDDDVFANTDNMVHYLLGIPGAGDEHLFVGQLITNVGPIREKWSKYYVPEQVTTSKSYPPYCGGGGLLMSGFTSRTIYQKSLGIELFPIDDVYLGMCLERAGLAPASHMGIRTVGVRVPSSKLESFDPCYYKELLLVHRFVPYEMLVMWDAIHQPDLVCGKKVVYQNL
SIO_010081: B3GNT3
subclass of: SO_0000673
so part of: B3GNT3
location: complement(574508..575653)
location: region:574508-575653:-1
so has part: feature:574508-575653:-1:exon

XP_032992692.1
type: Protein
SIO_000068: ncbiprotein

position:574508:-1
position: 574508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575653:-1
position: 575653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574508-575653:-1:exon

FCHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: FCHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(592292..630108)
location: region:592292-630108:-1
so has part: feature:592292-630108:-1:exon
subclass of: SO_0000010

117039518
type: Gene
SIO_000068: ncbigene

position:592292:-1
position: 592292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630108:-1
position: 630108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592292-630108:-1:exon

FCHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: FCHO1
product: FCH and mu domain containing endocytic adaptor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033136659.1
SIO_010081: FCHO1
subclass of: SO_0000673
so part of: FCHO1
location: complement(join(592292..592608,592886..593050,593219..593283,596096..596295,596483..596615,597089..597244,598346..598457,599146..599248,600053..600156,601604..602176,603660..603751,604502..604553,604658..604720,605009..605033,605604..605779,606472..606526,608337..608361,608469..608541,608782..608826,609092..609188,609324..609422,610526..610630,612547..612699,612899..613040,613733..613807,616252..616343,624514..624587,630034..630108))
location: region:592292-630108:-1
so has part: feature:630034-630108:-1:exon
so has part: feature:624514-624587:-1:exon
so has part: feature:616252-616343:-1:exon
so has part: feature:613733-613807:-1:exon
so has part: feature:612899-613040:-1:exon
so has part: feature:612547-612699:-1:exon
so has part: feature:610526-610630:-1:exon
so has part: feature:609324-609422:-1:exon
so has part: feature:609092-609188:-1:exon
so has part: feature:608782-608826:-1:exon
so has part: feature:608469-608541:-1:exon
so has part: feature:608337-608361:-1:exon
so has part: feature:606472-606526:-1:exon
so has part: feature:605604-605779:-1:exon
so has part: feature:605009-605033:-1:exon
so has part: feature:604658-604720:-1:exon
so has part: feature:604502-604553:-1:exon
so has part: feature:603660-603751:-1:exon
so has part: feature:601604-602176:-1:exon
so has part: feature:600053-600156:-1:exon
so has part: feature:599146-599248:-1:exon
so has part: feature:598346-598457:-1:exon
so has part: feature:597089-597244:-1:exon
so has part: feature:596483-596615:-1:exon
so has part: feature:596096-596295:-1:exon
so has part: feature:593219-593283:-1:exon
so has part: feature:592886-593050:-1:exon
so has part: feature:592292-592608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630034-630108:-1:exon

position:630034:-1
position: 630034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624514-624587:-1:exon

position:624514:-1
position: 624514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624587:-1
position: 624587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616252-616343:-1:exon

position:616252:-1
position: 616252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616343:-1
position: 616343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:613733-613807:-1:exon

position:613733:-1
position: 613733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613807:-1
position: 613807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:612899-613040:-1:exon

position:612899:-1
position: 612899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613040:-1
position: 613040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:612547-612699:-1:exon

position:612547:-1
position: 612547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612699:-1
position: 612699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610526-610630:-1:exon

position:610526:-1
position: 610526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610630:-1
position: 610630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:609324-609422:-1:exon

position:609324:-1
position: 609324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609422:-1
position: 609422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:609092-609188:-1:exon

position:609092:-1
position: 609092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609188:-1
position: 609188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:608782-608826:-1:exon

position:608782:-1
position: 608782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608826:-1
position: 608826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:608469-608541:-1:exon

position:608469:-1
position: 608469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608541:-1
position: 608541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:608337-608361:-1:exon

position:608337:-1
position: 608337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608361:-1
position: 608361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:606472-606526:-1:exon

position:606472:-1
position: 606472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606526:-1
position: 606526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:605604-605779:-1:exon

position:605604:-1
position: 605604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605779:-1
position: 605779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:605009-605033:-1:exon

position:605009:-1
position: 605009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605033:-1
position: 605033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:604658-604720:-1:exon

position:604658:-1
position: 604658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604720:-1
position: 604720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:604502-604553:-1:exon

position:604502:-1
position: 604502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604553:-1
position: 604553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:603660-603751:-1:exon

position:603660:-1
position: 603660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603751:-1
position: 603751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:601604-602176:-1:exon

position:601604:-1
position: 601604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602176:-1
position: 602176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:600053-600156:-1:exon

position:600053:-1
position: 600053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600156:-1
position: 600156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:599146-599248:-1:exon

position:599146:-1
position: 599146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599248:-1
position: 599248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:598346-598457:-1:exon

position:598346:-1
position: 598346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598457:-1
position: 598457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:597089-597244:-1:exon

position:597089:-1
position: 597089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597244:-1
position: 597244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:596483-596615:-1:exon

position:596483:-1
position: 596483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596615:-1
position: 596615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:596096-596295:-1:exon

position:596096:-1
position: 596096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596295:-1
position: 596295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:593219-593283:-1:exon

position:593219:-1
position: 593219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593283:-1
position: 593283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:592886-593050:-1:exon

position:592886:-1
position: 592886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593050:-1
position: 593050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:592292-592608:-1:exon

position:592608:-1
position: 592608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FCHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: FCHO1
product: FCH and mu domain containing endocytic adaptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033136660.1
SIO_010081: FCHO1
subclass of: SO_0000673
so part of: FCHO1
location: complement(join(592292..592608,592886..593050,593219..593283,596096..596295,596483..596615,597089..597244,598346..598457,599146..599248,600053..600156,601604..602176,603660..603751,604502..604553,604658..604720,605009..605033,605604..605779,606472..606526,608337..608361,608469..608541,608782..608826,609092..609188,609324..609422,610526..610630,612547..612699,612899..613040,613733..613807,616252..616343,624514..624587,626345..626425,630034..630084))
location: region:592292-630084:-1
so has part: feature:630034-630084:-1:exon
so has part: feature:626345-626425:-1:exon
so has part: feature:624514-624587:-1:exon
so has part: feature:616252-616343:-1:exon
so has part: feature:613733-613807:-1:exon
so has part: feature:612899-613040:-1:exon
so has part: feature:612547-612699:-1:exon
so has part: feature:610526-610630:-1:exon
so has part: feature:609324-609422:-1:exon
so has part: feature:609092-609188:-1:exon
so has part: feature:608782-608826:-1:exon
so has part: feature:608469-608541:-1:exon
so has part: feature:608337-608361:-1:exon
so has part: feature:606472-606526:-1:exon
so has part: feature:605604-605779:-1:exon
so has part: feature:605009-605033:-1:exon
so has part: feature:604658-604720:-1:exon
so has part: feature:604502-604553:-1:exon
so has part: feature:603660-603751:-1:exon
so has part: feature:601604-602176:-1:exon
so has part: feature:600053-600156:-1:exon
so has part: feature:599146-599248:-1:exon
so has part: feature:598346-598457:-1:exon
so has part: feature:597089-597244:-1:exon
so has part: feature:596483-596615:-1:exon
so has part: feature:596096-596295:-1:exon
so has part: feature:593219-593283:-1:exon
so has part: feature:592886-593050:-1:exon
so has part: feature:592292-592608:-1:exon

position:630084:-1
position: 630084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630034-630084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626345-626425:-1:exon

position:626345:-1
position: 626345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626425:-1
position: 626425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:624514-624587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616252-616343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613733-613807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:612899-613040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612547-612699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610526-610630:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:609324-609422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609092-609188:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608782-608826:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:608469-608541:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:608337-608361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:606472-606526:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:605604-605779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:605009-605033:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604658-604720:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:604502-604553:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:603660-603751:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:601604-602176:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:600053-600156:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:599146-599248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:598346-598457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:597089-597244:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:596483-596615:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:596096-596295:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:593219-593283:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:592886-593050:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:592292-592608:-1:exon

FCHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: FCHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR domain only protein 1
translation: MSYFTEHFWGEKNHGFDVLYHNMKHGQISAKELADFVRERAAVEETYAKSMAKMSKMAGNSTQLGTFAPLWEVFRISSDKLALCHAELVKKLQDLIKEIGRYGDEQLRAHKKSKDEVAGTLEAVQILQGAAQHLPKAKETYSSRCQELDRLRREGGSQKEIDKAELKSRKAVEALRRAVEKYNAARNDFQQKMLDSAVRLQEVEELHLEQMKVLIGSYVHSVEDTHVQIGQVHEEFKQNMENIGVETLLRNFAESKGTGRHPPGPLDFEELSIIPAQEGPKRTRSKAFRIPGLSRKERERDSVESPDTESGLPDVDEEGFTVRPETNQNGELPNRFCSSSDSDYDDEEPHKFYIRIKPVQPRERTSSAAAVEQLKASVGNLILPPSMGCTMKRHSSRHLKALASASAETDSDTAPAPGDKPGNPQAPLFGTRMKSCDSKPEPDVLPASALFGPPLESAFENEEFSGAPRSYLLASSPSPFSSSSPENVEDSGLDSPSHLATGPSPDARLWSPRPGTPQSPPGKRPPKDGPRCCQPADDAPDPWLPQPDSQELPEWADSVSAWPPAPAPPGNPPGRHDSPFTDPFLEAAAPGGRRGWSAAECPPRGGERDSCLSSNSASSSSSSPAPPSSGDSTSPSPWAPRGRELEGAPTDMPSDPASLPPSAAPGLTSMVAPPRRCRAKRPSAVSTGSDTPRSLSPSRLWALSTPQSSAGMTERAFFMATQPGLGVSRGPSPVVLGAQGALPVATAFTEYIHAYFKGCSPDSCLVKVTGELTMSFPAGILRVFSSAPAPPVLSFRLRHTAAIDQFLPNTELLFSDASQSDPHSKDFWLNMAALTAHLQKQAEQAPGAPYYNVTLLRYQYSKQGPRWAPLQLSVDWACGSEATRVRIDYSYNTGALASAVALGNVQILLPIEEPAANVQPQPSASWNLEEKRLLWRLLDLPGTQGHPGSGRLLASWEPLTGPSKPSPVAAQFTSEGSTLSGADVELVGSGYRMSLVKKRFATGIYLAGS
SIO_010081: FCHO1
subclass of: SO_0000673
so part of: FCHO1
location: complement(join(592586..592608,592886..593050,593219..593283,596096..596295,596483..596615,597089..597244,598346..598457,599146..599248,600053..600156,601604..602176,603660..603751,604502..604553,604658..604720,605009..605033,605604..605779,606472..606526,608337..608361,608469..608541,608782..608826,609092..609188,609324..609422,610526..610630,612547..612699,612899..613040,613733..613807,616252..616343,624514..624540))
location: region:592586-624540:-1
so has part: feature:624514-624540:-1:exon
so has part: feature:616252-616343:-1:exon
so has part: feature:613733-613807:-1:exon
so has part: feature:612899-613040:-1:exon
so has part: feature:612547-612699:-1:exon
so has part: feature:610526-610630:-1:exon
so has part: feature:609324-609422:-1:exon
so has part: feature:609092-609188:-1:exon
so has part: feature:608782-608826:-1:exon
so has part: feature:608469-608541:-1:exon
so has part: feature:608337-608361:-1:exon
so has part: feature:606472-606526:-1:exon
so has part: feature:605604-605779:-1:exon
so has part: feature:605009-605033:-1:exon
so has part: feature:604658-604720:-1:exon
so has part: feature:604502-604553:-1:exon
so has part: feature:603660-603751:-1:exon
so has part: feature:601604-602176:-1:exon
so has part: feature:600053-600156:-1:exon
so has part: feature:599146-599248:-1:exon
so has part: feature:598346-598457:-1:exon
so has part: feature:597089-597244:-1:exon
so has part: feature:596483-596615:-1:exon
so has part: feature:596096-596295:-1:exon
so has part: feature:593219-593283:-1:exon
so has part: feature:592886-593050:-1:exon
so has part: feature:592586-592608:-1:exon

XP_032992550.1
type: Protein
SIO_000068: ncbiprotein

position:592586:-1
position: 592586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624540:-1
position: 624540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624514-624540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616252-616343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613733-613807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612899-613040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612547-612699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610526-610630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609324-609422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609092-609188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608782-608826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608469-608541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608337-608361:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606472-606526:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605604-605779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605009-605033:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:604658-604720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:604502-604553:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:603660-603751:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:601604-602176:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:600053-600156:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:599146-599248:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:598346-598457:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:597089-597244:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:596483-596615:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:596096-596295:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:593219-593283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:592886-593050:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:592586-592608:-1:exon

FCHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: FCHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR domain only protein 1
translation: MSYFTEHFWGEKNHGFDVLYHNMKHGQISAKELADFVRERAAVEETYAKSMAKMSKMAGNSTQLGTFAPLWEVFRISSDKLALCHAELVKKLQDLIKEIGRYGDEQLRAHKKSKDEVAGTLEAVQILQGAAQHLPKAKETYSSRCQELDRLRREGGSQKEIDKAELKSRKAVEALRRAVEKYNAARNDFQQKMLDSAVRLQEVEELHLEQMKVLIGSYVHSVEDTHVQIGQVHEEFKQNMENIGVETLLRNFAESKGTGRHPPGPLDFEELSIIPAQEGPKRTRSKAFRIPGLSRKERERDSVESPDTESGLPDVDEEGFTVRPETNQNGELPNRFCSSSDSDYDDEEPHKFYIRIKPVQPRERTSSAAAVEQLKASVGNLILPPSMGCTMKRHSSRHLKALASASAETDSDTAPAPGDKPGNPQAPLFGTRMKSCDSKPEPDVLPASALFGPPLESAFENEEFSGAPRSYLLASSPSPFSSSSPENVEDSGLDSPSHLATGPSPDARLWSPRPGTPQSPPGKRPPKDGPRCCQPADDAPDPWLPQPDSQELPEWADSVSAWPPAPAPPGNPPGRHDSPFTDPFLEAAAPGGRRGWSAAECPPRGGERDSCLSSNSASSSSSSPAPPSSGDSTSPSPWAPRGRELEGAPTDMPSDPASLPPSAAPGLTSMVAPPRRCRAKRPSAVSTGSDTPRSLSPSRLWALSTPQSSAGMTERAFFMATQPGLGVSRGPSPVVLGAQGALPVATAFTEYIHAYFKGCSPDSCLVKVTGELTMSFPAGILRVFSSAPAPPVLSFRLRHTAAIDQFLPNTELLFSDASQSDPHSKDFWLNMAALTAHLQKQAEQAPGAPYYNVTLLRYQYSKQGPRWAPLQLSVDWACGSEATRVRIDYSYNTGALASAVALGNVQILLPIEEPAANVQPQPSASWNLEEKRLLWRLLDLPGTQGHPGSGRLLASWEPLTGPSKPSPVAAQFTSEGSTLSGADVELVGSGYRMSLVKKRFATGIYLAGS
SIO_010081: FCHO1
subclass of: SO_0000673
so part of: FCHO1
location: complement(join(592586..592608,592886..593050,593219..593283,596096..596295,596483..596615,597089..597244,598346..598457,599146..599248,600053..600156,601604..602176,603660..603751,604502..604553,604658..604720,605009..605033,605604..605779,606472..606526,608337..608361,608469..608541,608782..608826,609092..609188,609324..609422,610526..610630,612547..612699,612899..613040,613733..613807,616252..616343,624514..624540))
location: region:592586-624540:-1
so has part: feature:624514-624540:-1:exon
so has part: feature:616252-616343:-1:exon
so has part: feature:613733-613807:-1:exon
so has part: feature:612899-613040:-1:exon
so has part: feature:612547-612699:-1:exon
so has part: feature:610526-610630:-1:exon
so has part: feature:609324-609422:-1:exon
so has part: feature:609092-609188:-1:exon
so has part: feature:608782-608826:-1:exon
so has part: feature:608469-608541:-1:exon
so has part: feature:608337-608361:-1:exon
so has part: feature:606472-606526:-1:exon
so has part: feature:605604-605779:-1:exon
so has part: feature:605009-605033:-1:exon
so has part: feature:604658-604720:-1:exon
so has part: feature:604502-604553:-1:exon
so has part: feature:603660-603751:-1:exon
so has part: feature:601604-602176:-1:exon
so has part: feature:600053-600156:-1:exon
so has part: feature:599146-599248:-1:exon
so has part: feature:598346-598457:-1:exon
so has part: feature:597089-597244:-1:exon
so has part: feature:596483-596615:-1:exon
so has part: feature:596096-596295:-1:exon
so has part: feature:593219-593283:-1:exon
so has part: feature:592886-593050:-1:exon
so has part: feature:592586-592608:-1:exon

XP_032992551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624514-624540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616252-616343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613733-613807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612899-613040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612547-612699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610526-610630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609324-609422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609092-609188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608782-608826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608469-608541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608337-608361:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606472-606526:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605604-605779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605009-605033:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:604658-604720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:604502-604553:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:603660-603751:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:601604-602176:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:600053-600156:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:599146-599248:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:598346-598457:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:597089-597244:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:596483-596615:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:596096-596295:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:593219-593283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:592886-593050:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:592586-592608:-1:exon

MAP1S
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: MAP1S
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(635433..643511)
location: region:635433-643511:-1
so has part: feature:635433-643511:-1:exon
subclass of: SO_0000010

117039404
type: Gene
SIO_000068: ncbigene

position:635433:-1
position: 635433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643511:-1
position: 643511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635433-643511:-1:exon

MAP1S
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: MAP1S
product: microtubule associated protein 1S
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033136502.1
SIO_010081: MAP1S
subclass of: SO_0000673
so part of: MAP1S
location: complement(join(635433..636555,638182..638396,638862..642035,643374..643511))
location: region:635433-643511:-1
so has part: feature:643374-643511:-1:exon
so has part: feature:638862-642035:-1:exon
so has part: feature:638182-638396:-1:exon
so has part: feature:635433-636555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643374-643511:-1:exon

position:643374:-1
position: 643374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638862-642035:-1:exon

position:638862:-1
position: 638862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642035:-1
position: 642035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638182-638396:-1:exon

position:638182:-1
position: 638182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638396:-1
position: 638396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635433-636555:-1:exon

position:636555:-1
position: 636555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP1S
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: MAP1S
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: microtubule-associated protein 1S
translation: MLLGPASRETGELVLQTGTFSLRDFIQIFADKEVGELLSSADPSARTSLTVICPDFGEWKASRLGQHNLLDFIDLRFNPGPVLPEMEGLQEFLEYLSESLDPPSPFDLLEPPSTVGFLKLSRPCCYIFPGGRGDSAFFAVNGFNILVNGGSNPRSSFWKLVCHLDRIDSILVTHMGTDSLPGVNSLLQRKLAEMEEDPSSQGSPNDDSVKNLISPELGVVFLNASKKLKAIAGDSGVLKSCDEASLALHYLDKLGIQPSPLCRDSGPKVEPTVLFQKMGVGRLDMYILNPVKGSKELEVLMQHWCGNGCPQGLELPLHCVTSICALLVWHPVSPTEKIVRVLFPGCTPQSKILEGLEKVRHLEFLKHPVVTQKDLESGSSSGSTPQSQQKRTTSQESLKSGSKLSLPEPKERREAKAASARERPMAPSESSKGSLEEEQAKETRTKVELSSAVRPKQLKEKPMAKKDTKKLLPKNDAAPLGKVPKQEAKADPPRRETVAKKEAKVEEKTAVRQPSRELRRSASTEAKRPPTKMGSFRKTTPSIKKEADKLKAQPLKEAPLKMPSGAKGAAGGLSDGSKSSTENAAREDSRPEALGAESTDEGITTAESELEPSPLECPGNGVLAAQNGLCTGGDPESPQPFRHLEASSPLRGAGPPSPLAKTPKSERSVNFEQTPTGTHAGLHPEGEEACGSSEEKTLEMMSPASSGPASARHTPFHQSPVEDVIMAEEPAALTNSWRPDGSATGLRVSRDNSSSSQEKPPGCLSPSLIRDDLPDVSPTITTPSLPAEVGSPHSTEVDESLSMSFEQVLPPVSEFQEEAEXARPGGLTPELDMGKGGLSLPVRPCHPHHAQRLDGHSLARRARRSDSPHDVDLCLVSPCEFEHPKSERSPSANFSPRDMSNSSDFSQELTKPLVGQRKGPWSRKPHPLADETPPTSLSESLPTLSDSDIPPATEECPSITADGGLDSDDDPESLARARDPLPATLKDPLPLPAQPGICMVDPDREGAAKGKRPASRVGSAPPKADSAPRGVAPNSSRIKPSSASAGERARTPALSRSELAASRSSGDHRASLGQRAASSRPSLGAGRAGPAGARPSFVRPPVYLELAYIPGSASAQWVDEDFFRHVRSQCYVISGEDHIKEGVMRRILDALLAGKQHWAHDTQVTLIPTFDSLVMHEWYAETLERQQALGVTVLGSNSMVAMQDETFPACKVEF
SIO_010081: MAP1S
subclass of: SO_0000673
so part of: MAP1S
location: complement(join(636400..636555,638182..638396,638862..642035,643374..643474))
location: region:636400-643474:-1
so has part: feature:643374-643474:-1:exon
so has part: feature:638862-642035:-1:exon
so has part: feature:638182-638396:-1:exon
so has part: feature:636400-636555:-1:exon

XP_032992393.1
type: Protein
SIO_000068: ncbiprotein

position:636400:-1
position: 636400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643474:-1
position: 643474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643374-643474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638862-642035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638182-638396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636400-636555:-1:exon

LOC117039405
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(644138..658466)
location: region:644138-658466:-1
so has part: feature:644138-658466:-1:exon
subclass of: SO_0000010

117039405
type: Gene
SIO_000068: ncbigene

position:644138:-1
position: 644138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658466:-1
position: 658466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644138-658466:-1:exon

LOC117039405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039405
product: microtubule-associated protein 1S-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033136503.1
SIO_010081: LOC117039405
subclass of: SO_0000673
so part of: LOC117039405
location: complement(join(644138..644215,647191..647292,658297..658466))
location: region:644138-658466:-1
so has part: feature:658297-658466:-1:exon
so has part: feature:647191-647292:-1:exon
so has part: feature:644138-644215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658297-658466:-1:exon

position:658297:-1
position: 658297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:647191-647292:-1:exon

position:647191:-1
position: 647191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647292:-1
position: 647292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:644138-644215:-1:exon

position:644215:-1
position: 644215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 1S-like
translation: MAAGAAAVGGGGGGAPLATPAAATASAEARFSLVVVFGAGGGRGGLRTAVLRAVRDGIRSWDIDLTACNLDQQLKLFVSRHSATFSDIVKGQRGSAPSGRHPGDNGAAEPF
SIO_010081: LOC117039405
subclass of: SO_0000673
so part of: LOC117039405
location: complement(join(644151..644215,647191..647292,658297..658465))
location: region:644151-658465:-1
so has part: feature:658297-658465:-1:exon
so has part: feature:647191-647292:-1:exon
so has part: feature:644151-644215:-1:exon

XP_032992394.1
type: Protein
SIO_000068: ncbiprotein

position:644151:-1
position: 644151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658465:-1
position: 658465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658297-658465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647191-647292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644151-644215:-1:exon

LOC117039679
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 659397..661597
location: region:659397-661597:1
so has part: feature:659397-661597:1:exon
subclass of: SO_0000010

117039679
type: Gene
SIO_000068: ncbigene

position:659397:1
position: 659397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661597:1
position: 661597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659397-661597:1:exon

LOC117039679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039679
product: zona pellucida sperm-binding protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033136858.1
SIO_010081: LOC117039679
subclass of: SO_0000673
so part of: LOC117039679
location: join(659397..659604,660878..660999,661487..661597)
location: region:659397-661597:1
so has part: feature:659397-659604:1:exon
so has part: feature:660878-660999:1:exon
so has part: feature:661487-661597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659397-659604:1:exon

position:659604:1
position: 659604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660878-660999:1:exon

position:660878:1
position: 660878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660999:1
position: 660999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661487-661597:1:exon

position:661487:1
position: 661487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117039679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zona pellucida sperm-binding protein 4-like
translation: MWLCEIPRKMPFWGLGVLLLLLGGTLVGPSDAAGSFWDAALPTCDEQSLTFLLLPQPKVSSSLIRLLDRKGNPHLLKNDSTCGTSAFPNPDGSVVVRVAFDGCYTRAQDSRFRTTVHIEGLAADGRVTSYKEELSCPEPLLGTT
SIO_010081: LOC117039679
subclass of: SO_0000673
so part of: LOC117039679
location: join(659403..659604,660878..660999,661487..661597)
location: region:659403-661597:1
so has part: feature:659403-659604:1:exon
so has part: feature:660878-660999:1:exon
so has part: feature:661487-661597:1:exon

XP_032992749.1
type: Protein
SIO_000068: ncbiprotein

position:659403:1
position: 659403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659403-659604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660878-660999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661487-661597:1:exon

LOC117039680
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662502..672881
location: region:662502-672881:1
so has part: feature:662502-672881:1:exon
subclass of: SO_0000010

117039680
type: Gene
SIO_000068: ncbigene

position:662502:1
position: 662502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672881:1
position: 672881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662502-672881:1:exon

LOC117039680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039680
product: zona pellucida sperm-binding protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136859.1
SIO_010081: LOC117039680
subclass of: SO_0000673
so part of: LOC117039680
location: join(662502..662631,664136..664291,665435..665622,666342..666439,666626..666753,667745..667934,670200..670347,671529..671616,671765..671878,672703..672881)
location: region:662502-672881:1
so has part: feature:662502-662631:1:exon
so has part: feature:664136-664291:1:exon
so has part: feature:665435-665622:1:exon
so has part: feature:666342-666439:1:exon
so has part: feature:666626-666753:1:exon
so has part: feature:667745-667934:1:exon
so has part: feature:670200-670347:1:exon
so has part: feature:671529-671616:1:exon
so has part: feature:671765-671878:1:exon
so has part: feature:672703-672881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662502-662631:1:exon

position:662631:1
position: 662631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664136-664291:1:exon

position:664136:1
position: 664136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664291:1
position: 664291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665435-665622:1:exon

position:665435:1
position: 665435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665622:1
position: 665622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:666342-666439:1:exon

position:666342:1
position: 666342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666439:1
position: 666439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666626-666753:1:exon

position:666626:1
position: 666626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666753:1
position: 666753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:667745-667934:1:exon

position:667745:1
position: 667745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667934:1
position: 667934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:670200-670347:1:exon

position:670200:1
position: 670200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670347:1
position: 670347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:671529-671616:1:exon

position:671529:1
position: 671529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671616:1
position: 671616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:671765-671878:1:exon

position:671765:1
position: 671765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671878:1
position: 671878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:672703-672881:1:exon

position:672703:1
position: 672703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117039680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zona pellucida sperm-binding protein 4-like
translation: MFLLDLLATVLLAQGPWGALAFAPKMGHVGKRGSLADRQGQLWALDNPSASHCSSVPAPDRLPCGPRQVRQAECVGLGCCYNPTERAVPCYYANKVTARCTPDGHFSIALSRNATRPPLRLGSVRLASGQGERCAPASRNNGFVFFQFPLSACGTTFKESGSRHMYENELVADRQVLASPSGSITRDSDFRLTVRCSYSAEDSLPVGIQIATPPPPAGVAEQGPLTLEMRLARDAKYSSYYSGPDYPVVKVLRTPVHVEVRLLARTDPALVLVLHNCWATPSTNPLQKPQWRLLEDGCPYKGDNYQTRLVPIGADSGLPFPMHYQRFVVSTFTFVNGASQQVLSGQVYFHCSASACAPSALESCRISCNRNPLGRSRRASSGERRLPEKWLTLVTSDGPVDFFHKDADTVVHEASPKSLYPSTLMQWDNILFLVAGLVAVLAVGMFSAVALKKQQAALGGPNLPYA
SIO_010081: LOC117039680
subclass of: SO_0000673
so part of: LOC117039680
location: join(662502..662631,664136..664291,665435..665622,666342..666439,666626..666753,667745..667934,670200..670347,671529..671616,671765..671878,672703..672863)
location: region:662502-672863:1
so has part: feature:662502-662631:1:exon
so has part: feature:664136-664291:1:exon
so has part: feature:665435-665622:1:exon
so has part: feature:666342-666439:1:exon
so has part: feature:666626-666753:1:exon
so has part: feature:667745-667934:1:exon
so has part: feature:670200-670347:1:exon
so has part: feature:671529-671616:1:exon
so has part: feature:671765-671878:1:exon
so has part: feature:672703-672863:1:exon

XP_032992750.1
type: Protein
SIO_000068: ncbiprotein

position:672863:1
position: 672863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662502-662631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664136-664291:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665435-665622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666342-666439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666626-666753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667745-667934:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670200-670347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:671529-671616:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:671765-671878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672703-672863:1:exon

LOC117039677
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(674316..677120)
location: region:674316-677120:-1
so has part: feature:674316-677120:-1:exon
subclass of: SO_0000010

117039677
type: Gene
SIO_000068: ncbigene

position:674316:-1
position: 674316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677120:-1
position: 677120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674316-677120:-1:exon

LOC117039677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039677
product: cocaine- and amphetamine-regulated transcript protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033136857.1
SIO_010081: LOC117039677
subclass of: SO_0000673
so part of: LOC117039677
location: complement(join(674316..674445,676525..676608,676927..677120))
location: region:674316-677120:-1
so has part: feature:676927-677120:-1:exon
so has part: feature:676525-676608:-1:exon
so has part: feature:674316-674445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676927-677120:-1:exon

position:676927:-1
position: 676927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676525-676608:-1:exon

position:676525:-1
position: 676525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676608:-1
position: 676608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674316-674445:-1:exon

position:674445:-1
position: 674445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cocaine- and amphetamine-regulated transcript protein-like
translation: MASSKLPILCIGCSVLLLLGAREEAVGLRGAGVGAEESQEEKEMIGALKEVLEKLKNHQLPSIEKKLGWVPSCDAGESCAIRKGARIGRLCSCPWGTSCNLHILKCL
SIO_010081: LOC117039677
subclass of: SO_0000673
so part of: LOC117039677
location: complement(join(674338..674445,676525..676608,676927..677058))
location: region:674338-677058:-1
so has part: feature:676927-677058:-1:exon
so has part: feature:676525-676608:-1:exon
so has part: feature:674338-674445:-1:exon

XP_032992748.1
type: Protein
SIO_000068: ncbiprotein

position:674338:-1
position: 674338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677058:-1
position: 677058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676927-677058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676525-676608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674338-674445:-1:exon

GADD45B
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: GADD45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 698431..700977
location: region:698431-700977:1
so has part: feature:698431-700977:1:exon
subclass of: SO_0000010

117039616
type: Gene
SIO_000068: ncbigene

position:698431:1
position: 698431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700977:1
position: 700977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698431-700977:1:exon

GADD45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GADD45B
product: growth arrest and DNA damage inducible beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_033136792.1
SIO_010081: GADD45B
subclass of: SO_0000673
so part of: GADD45B
location: join(698431..698730,698874..698975,699518..699734,700834..700977)
location: region:698431-700977:1
so has part: feature:698431-698730:1:exon
so has part: feature:698874-698975:1:exon
so has part: feature:699518-699734:1:exon
so has part: feature:700834-700977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698431-698730:1:exon

position:698730:1
position: 698730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698874-698975:1:exon

position:698874:1
position: 698874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698975:1
position: 698975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:699518-699734:1:exon

position:699518:1
position: 699518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699734:1
position: 699734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700834-700977:1:exon

position:700834:1
position: 700834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GADD45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GADD45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest and DNA damage-inducible protein GADD45 beta
translation: MTLEELVSCDNTQNKMKSVSEAVEQLLVAAQRQGALTVGVYESAKLMNVDPDSVVLCLLAIDEEDEDDIALQIHFTLIQAFCCDNDINILRVSGMERLAAVLGDGSQDTAEPQDLHCILVTNPHTDSWKTQGLAEVASYCEESRCNNEWVPYVTLQAR
SIO_010081: GADD45B
subclass of: SO_0000673
so part of: GADD45B
location: join(698687..698730,698874..698975,699518..699734,700834..700947)
location: region:698687-700947:1
so has part: feature:698687-698730:1:exon
so has part: feature:698874-698975:1:exon
so has part: feature:699518-699734:1:exon
so has part: feature:700834-700947:1:exon

XP_032992683.1
type: Protein
SIO_000068: ncbiprotein

position:698687:1
position: 698687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700947:1
position: 700947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698687-698730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698874-698975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699518-699734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700834-700947:1:exon

GNG7
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: GNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(736357..806633)
location: region:736357-806633:-1
so has part: feature:736357-806633:-1:exon
subclass of: SO_0000010

117039512
type: Gene
SIO_000068: ncbigene

position:736357:-1
position: 736357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806633:-1
position: 806633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736357-806633:-1:exon

GNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GNG7
product: G protein subunit gamma 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033136647.1
SIO_010081: GNG7
subclass of: SO_0000673
so part of: GNG7
location: complement(join(736357..737213,738213..738328,758338..758365,787949..788017,806358..806633))
location: region:736357-806633:-1
so has part: feature:806358-806633:-1:exon
so has part: feature:787949-788017:-1:exon
so has part: feature:758338-758365:-1:exon
so has part: feature:738213-738328:-1:exon
so has part: feature:736357-737213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806358-806633:-1:exon

position:806358:-1
position: 806358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:787949-788017:-1:exon

position:787949:-1
position: 787949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788017:-1
position: 788017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758338-758365:-1:exon

position:758338:-1
position: 758338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758365:-1
position: 758365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:738213-738328:-1:exon

position:738213:-1
position: 738213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738328:-1
position: 738328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:736357-737213:-1:exon

position:737213:-1
position: 737213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
translation: MSTTNNIAQARKLVEQLRIEAGIERIKVSKASSELMNYCEQQARNDPLLVGVPASENPFKDKKPCTIL
SIO_010081: GNG7
subclass of: SO_0000673
so part of: GNG7
location: complement(join(737088..737213,738213..738293))
location: region:737088-738293:-1
so has part: feature:738213-738293:-1:exon
so has part: feature:737088-737213:-1:exon

XP_032992538.1
type: Protein
SIO_000068: ncbiprotein

position:737088:-1
position: 737088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738293:-1
position: 738293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738213-738293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737088-737213:-1:exon

DIRAS1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: DIRAS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821364..831842)
location: region:821364-831842:-1
so has part: feature:821364-831842:-1:exon
subclass of: SO_0000010

117039658
type: Gene
SIO_000068: ncbigene

position:821364:-1
position: 821364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831842:-1
position: 831842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821364-831842:-1:exon

DIRAS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: DIRAS1
product: DIRAS family GTPase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033136838.1
SIO_010081: DIRAS1
subclass of: SO_0000673
so part of: DIRAS1
location: complement(join(821364..822038,831808..831842))
location: region:821364-831842:-1
so has part: feature:831808-831842:-1:exon
so has part: feature:821364-822038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:831808-831842:-1:exon

position:831808:-1
position: 831808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821364-822038:-1:exon

position:822038:-1
position: 822038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIRAS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: DIRAS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein Di-Ras1
translation: MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFVLVFSITSRQSLEELRPIYQQIVHIKGSVESIPIMLVGNKCDETQREVPTQEGEATAKEWKCAFMETSAKMNYNVKELFQELLNLEKKRNMSLNIDGKRSSKQKRTDKIKGKCSLM
SIO_010081: DIRAS1
subclass of: SO_0000673
so part of: DIRAS1
location: complement(821431..822027)
location: region:821431-822027:-1
so has part: feature:821431-822027:-1:exon

XP_032992729.1
type: Protein
SIO_000068: ncbiprotein

position:821431:-1
position: 821431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822027:-1
position: 822027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821431-822027:-1:exon

SLC39A3
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SLC39A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(850281..854638)
location: region:850281-854638:-1
so has part: feature:850281-854638:-1:exon
subclass of: SO_0000010

117039564
type: Gene
SIO_000068: ncbigene

position:850281:-1
position: 850281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854638:-1
position: 854638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850281-854638:-1:exon

SLC39A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SLC39A3
product: solute carrier family 39 member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033136719.1
SIO_010081: SLC39A3
subclass of: SO_0000673
so part of: SLC39A3
location: complement(join(850281..851090,851479..851773,854562..854638))
location: region:850281-854638:-1
so has part: feature:854562-854638:-1:exon
so has part: feature:851479-851773:-1:exon
so has part: feature:850281-851090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854562-854638:-1:exon

position:854562:-1
position: 854562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:851479-851773:-1:exon

position:851479:-1
position: 851479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851773:-1
position: 851773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:850281-851090:-1:exon

position:851090:-1
position: 851090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC39A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SLC39A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter ZIP3
translation: MNLLVTKVLCLVGVFGLMLGGSLLPVRFIATDGEKAERSQRIISICNSFGGGVFLGTIFNALLPAVREKLEEVLKVGNMVTDYPLAETIMLLGFFMTVFVEQLVLTVRKEQPSLIDLETFNAGSDAGSDSEFESPFLEPPSKCHHYHQGSSTSHSTSDCGLNVHELSRSTPLRLFSLVFALSAHSIFEGLALGLQEEGHKVMSLFLGVAIHETLVAVALGITMTKTGLTLREAAKLAGAVSIMIPLGIVIGMGIESRHSVASSVASVLLQGIASGTFLFVTFFEILAKELEEKNNRLLKVLFLVLGYAVMATLVFFKW
SIO_010081: SLC39A3
subclass of: SO_0000673
so part of: SLC39A3
location: complement(join(850341..851090,851479..851685))
location: region:850341-851685:-1
so has part: feature:851479-851685:-1:exon
so has part: feature:850341-851090:-1:exon

XP_032992610.1
type: Protein
SIO_000068: ncbiprotein

position:850341:-1
position: 850341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851685:-1
position: 851685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851479-851685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850341-851090:-1:exon

SGTA
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SGTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(859881..866986)
location: region:859881-866986:-1
so has part: feature:859881-866986:-1:exon
subclass of: SO_0000010

117039524
type: Gene
SIO_000068: ncbigene

position:859881:-1
position: 859881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866986:-1
position: 866986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859881-866986:-1:exon

SGTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SGTA
product: small glutamine rich tetratricopeptide repeat containing alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_033136671.1
SIO_010081: SGTA
subclass of: SO_0000673
so part of: SGTA
location: complement(join(859881..860001,860927..861016,861255..861292,861547..861609,862072..862210,862395..862499,863168..863267,863607..863691,863924..864027,864725..864854,866864..866986))
location: region:859881-866986:-1
so has part: feature:866864-866986:-1:exon
so has part: feature:864725-864854:-1:exon
so has part: feature:863924-864027:-1:exon
so has part: feature:863607-863691:-1:exon
so has part: feature:863168-863267:-1:exon
so has part: feature:862395-862499:-1:exon
so has part: feature:862072-862210:-1:exon
so has part: feature:861547-861609:-1:exon
so has part: feature:861255-861292:-1:exon
so has part: feature:860927-861016:-1:exon
so has part: feature:859881-860001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866864-866986:-1:exon

position:866864:-1
position: 866864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864725-864854:-1:exon

position:864725:-1
position: 864725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864854:-1
position: 864854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:863924-864027:-1:exon

position:863924:-1
position: 863924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864027:-1
position: 864027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863607-863691:-1:exon

position:863607:-1
position: 863607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863691:-1
position: 863691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:863168-863267:-1:exon

position:863168:-1
position: 863168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863267:-1
position: 863267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:862395-862499:-1:exon

position:862395:-1
position: 862395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862499:-1
position: 862499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:862072-862210:-1:exon

position:862072:-1
position: 862072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862210:-1
position: 862210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:861547-861609:-1:exon

position:861547:-1
position: 861547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861609:-1
position: 861609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:861255-861292:-1:exon

position:861255:-1
position: 861255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861292:-1
position: 861292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:860927-861016:-1:exon

position:860927:-1
position: 860927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861016:-1
position: 861016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:859881-860001:-1:exon

position:860001:-1
position: 860001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SGTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small glutamine-rich tetratricopeptide repeat-containing protein alpha
translation: MAEKRRLAFSIIQFLQDQLHHGGLSPDAQESLEVAIQCLETAFGVSTDDRSLALSQTLPEIFEAAAAKEPQPSPPPSEPVTPSEEEAAEAERLKAEGNEQMKAENFESAVSFYGKAIELNPSNAVYYCNRAAAYSKLGNYTGAVRDCERAIHIDPKYSKAYGRMGLALSSLNKLSDAIVYYRKALELDPDNETYKSNLKVTEQKMKEAPSPTGGAGGFDLAGLLNNPGFMSMASNLMNNPQVQQLMSGMISGGTNPMAAPGASASPNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNEEQQE
SIO_010081: SGTA
subclass of: SO_0000673
so part of: SGTA
location: complement(join(859887..860001,860927..861016,861255..861292,861547..861609,862072..862210,862395..862499,863168..863267,863607..863691,863924..864027,864725..864824))
location: region:859887-864824:-1
so has part: feature:864725-864824:-1:exon
so has part: feature:863924-864027:-1:exon
so has part: feature:863607-863691:-1:exon
so has part: feature:863168-863267:-1:exon
so has part: feature:862395-862499:-1:exon
so has part: feature:862072-862210:-1:exon
so has part: feature:861547-861609:-1:exon
so has part: feature:861255-861292:-1:exon
so has part: feature:860927-861016:-1:exon
so has part: feature:859887-860001:-1:exon

XP_032992562.1
type: Protein
SIO_000068: ncbiprotein

position:859887:-1
position: 859887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864824:-1
position: 864824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864725-864824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863924-864027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863607-863691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863168-863267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862395-862499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:862072-862210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861547-861609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861255-861292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860927-861016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859887-860001:-1:exon

THOP1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: THOP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 869307..880833
location: region:869307-880833:1
so has part: feature:869307-880833:1:exon
subclass of: SO_0000010

117039514
type: Gene
SIO_000068: ncbigene

position:869307:1
position: 869307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880833:1
position: 880833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869307-880833:1:exon

THOP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: THOP1
product: thimet oligopeptidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033136649.1
SIO_010081: THOP1
subclass of: SO_0000673
so part of: THOP1
location: join(869307..869399,870271..870474,871156..871304,873547..873654,874057..874159,874818..874978,875478..875613,876276..876642,877453..877654,878355..878541,879262..879390,879815..879951,880623..880833)
location: region:869307-880833:1
so has part: feature:869307-869399:1:exon
so has part: feature:870271-870474:1:exon
so has part: feature:871156-871304:1:exon
so has part: feature:873547-873654:1:exon
so has part: feature:874057-874159:1:exon
so has part: feature:874818-874978:1:exon
so has part: feature:875478-875613:1:exon
so has part: feature:876276-876642:1:exon
so has part: feature:877453-877654:1:exon
so has part: feature:878355-878541:1:exon
so has part: feature:879262-879390:1:exon
so has part: feature:879815-879951:1:exon
so has part: feature:880623-880833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869307-869399:1:exon

position:869399:1
position: 869399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:870271-870474:1:exon

position:870271:1
position: 870271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870474:1
position: 870474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:871156-871304:1:exon

position:871156:1
position: 871156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871304:1
position: 871304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873547-873654:1:exon

position:873547:1
position: 873547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873654:1
position: 873654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:874057-874159:1:exon

position:874057:1
position: 874057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874159:1
position: 874159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:874818-874978:1:exon

position:874818:1
position: 874818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874978:1
position: 874978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:875478-875613:1:exon

position:875478:1
position: 875478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875613:1
position: 875613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:876276-876642:1:exon

position:876276:1
position: 876276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876642:1
position: 876642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:877453-877654:1:exon

position:877453:1
position: 877453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877654:1
position: 877654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:878355-878541:1:exon

position:878355:1
position: 878355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878541:1
position: 878541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:879262-879390:1:exon

position:879262:1
position: 879262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879390:1
position: 879390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:879815-879951:1:exon

position:879815:1
position: 879815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879951:1
position: 879951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:880623-880833:1:exon

position:880623:1
position: 880623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THOP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: THOP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thimet oligopeptidase
translation: MAPPTDSTMEAAAHPCPAIRLRWDLTAAQIQDATAELIEKTKQVYDTVGALAQGDISYENTLGALAAVEVEYTVQRNMLDFPQHVSPCKEVRAASTEADKKLSEFDVEMSMRRDVYQRIIWLQEKLENTSLKPEAKRYLERLIKLGRRSGLHLPEETQEKIKEIKKRLSVLCIDFNKNLNEDTTVLPFSREELGGLPEDFLSSLEKTEEGKLKVTLKYPHYFPLMKKCHVPETRRRVEKQFNSRCKEENCQILKELVVLRAKKAALLGFETHADFVLEMNMAKDCQTVASFLDELAAKLRVLGEQERALMLSLKRQECEQRGLPFDGHLHAWDLRFYMNRVQETLYQVDQNLLKEFFPMEVVTAGLLGIYQELLGLTFRLEEGAPAWHPDVQLYAVQDAQSGQAIGKFYLDLYPREGKYGHAACFGLQPGCLLPDGSRQISVAAMVANFTKPTQDAPSLLQHDEVETYFHEFGHVMHQLCSQADFAMFSGTHVERDFVEAPSQMLENWVWEKEPLRRMSTHYKNGAPIPDQLLEKLIKSRQANTGLFNLRQIVLAKVDQALHTQTDADPVEEYARQCDKILGVPATPGTNMPATFGHLAGGYDAQYYGYLWSEVYSMDMFYTRFKKEGVMNHKVGMDYRNCILRPGGSLDASDMLLRFLGRNPKQDAFLASKGLAADPTSLPSSC
SIO_010081: THOP1
subclass of: SO_0000673
so part of: THOP1
location: join(869384..869399,870271..870474,871156..871304,873547..873654,874057..874159,874818..874978,875478..875613,876276..876642,877453..877654,878355..878541,879262..879390,879815..879951,880623..880781)
location: region:869384-880781:1
so has part: feature:869384-869399:1:exon
so has part: feature:870271-870474:1:exon
so has part: feature:871156-871304:1:exon
so has part: feature:873547-873654:1:exon
so has part: feature:874057-874159:1:exon
so has part: feature:874818-874978:1:exon
so has part: feature:875478-875613:1:exon
so has part: feature:876276-876642:1:exon
so has part: feature:877453-877654:1:exon
so has part: feature:878355-878541:1:exon
so has part: feature:879262-879390:1:exon
so has part: feature:879815-879951:1:exon
so has part: feature:880623-880781:1:exon

XP_032992540.1
type: Protein
SIO_000068: ncbiprotein

position:869384:1
position: 869384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880781:1
position: 880781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869384-869399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870271-870474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871156-871304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873547-873654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874057-874159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874818-874978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875478-875613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:876276-876642:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:877453-877654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878355-878541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879262-879390:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:879815-879951:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:880623-880781:1:exon

LOC117039587
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(886236..901749)
location: region:886236-901749:-1
so has part: feature:886236-901749:-1:exon
subclass of: SO_0000010

117039587
type: Gene
SIO_000068: ncbigene

position:886236:-1
position: 886236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901749:-1
position: 901749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886236-901749:-1:exon

LOC117039587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039587
product: serine/threonine-protein kinase PLK2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033136751.1
SIO_010081: LOC117039587
subclass of: SO_0000673
so part of: LOC117039587
location: complement(join(886236..886815,886914..887024,887303..887432,887574..887736,888694..888765,889513..889609,890348..890415,891057..891195,892070..892268,892568..892663,893821..893908,895694..895823,896776..896892,901238..901749))
location: region:886236-901749:-1
so has part: feature:901238-901749:-1:exon
so has part: feature:896776-896892:-1:exon
so has part: feature:895694-895823:-1:exon
so has part: feature:893821-893908:-1:exon
so has part: feature:892568-892663:-1:exon
so has part: feature:892070-892268:-1:exon
so has part: feature:891057-891195:-1:exon
so has part: feature:890348-890415:-1:exon
so has part: feature:889513-889609:-1:exon
so has part: feature:888694-888765:-1:exon
so has part: feature:887574-887736:-1:exon
so has part: feature:887303-887432:-1:exon
so has part: feature:886914-887024:-1:exon
so has part: feature:886236-886815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901238-901749:-1:exon

position:901238:-1
position: 901238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896776-896892:-1:exon

position:896776:-1
position: 896776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896892:-1
position: 896892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:895694-895823:-1:exon

position:895694:-1
position: 895694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895823:-1
position: 895823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:893821-893908:-1:exon

position:893821:-1
position: 893821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893908:-1
position: 893908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:892568-892663:-1:exon

position:892568:-1
position: 892568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892663:-1
position: 892663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:892070-892268:-1:exon

position:892070:-1
position: 892070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892268:-1
position: 892268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:891057-891195:-1:exon

position:891057:-1
position: 891057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891195:-1
position: 891195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:890348-890415:-1:exon

position:890348:-1
position: 890348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890415:-1
position: 890415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889513-889609:-1:exon

position:889513:-1
position: 889513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889609:-1
position: 889609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:888694-888765:-1:exon

position:888694:-1
position: 888694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888765:-1
position: 888765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:887574-887736:-1:exon

position:887574:-1
position: 887574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887736:-1
position: 887736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:887303-887432:-1:exon

position:887303:-1
position: 887303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887432:-1
position: 887432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:886914-887024:-1:exon

position:886914:-1
position: 886914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887024:-1
position: 887024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:886236-886815:-1:exon

position:886815:-1
position: 886815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039587
product: serine/threonine-protein kinase PLK2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033136750.1
SIO_010081: LOC117039587
subclass of: SO_0000673
so part of: LOC117039587
location: complement(join(886236..886815,886914..887024,887303..887432,887574..887733,888694..888765,889513..889609,890348..890415,891057..891195,892070..892268,892568..892663,893821..893908,895694..895823,896776..896892,898879..898986,901238..901748))
location: region:886236-901748:-1
so has part: feature:901238-901748:-1:exon
so has part: feature:898879-898986:-1:exon
so has part: feature:896776-896892:-1:exon
so has part: feature:895694-895823:-1:exon
so has part: feature:893821-893908:-1:exon
so has part: feature:892568-892663:-1:exon
so has part: feature:892070-892268:-1:exon
so has part: feature:891057-891195:-1:exon
so has part: feature:890348-890415:-1:exon
so has part: feature:889513-889609:-1:exon
so has part: feature:888694-888765:-1:exon
so has part: feature:887574-887733:-1:exon
so has part: feature:887303-887432:-1:exon
so has part: feature:886914-887024:-1:exon
so has part: feature:886236-886815:-1:exon

position:901748:-1
position: 901748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901238-901748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898879-898986:-1:exon

position:898879:-1
position: 898879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898986:-1
position: 898986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896776-896892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895694-895823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893821-893908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892568-892663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892070-892268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891057-891195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890348-890415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889513-889609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888694-888765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887574-887733:-1:exon

position:887733:-1
position: 887733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:887303-887432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886914-887024:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886236-886815:-1:exon

LOC117039587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039587
product: serine/threonine-protein kinase PLK2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033136749.1
SIO_010081: LOC117039587
subclass of: SO_0000673
so part of: LOC117039587
location: complement(join(886236..886815,886914..887024,887303..887432,887574..887736,888694..888765,889513..889609,890348..890415,891057..891195,892070..892268,892568..892663,893821..893908,895694..895823,896776..896892,898879..898986,901238..901748))
location: region:886236-901748:-1
so has part: feature:901238-901748:-1:exon
so has part: feature:898879-898986:-1:exon
so has part: feature:896776-896892:-1:exon
so has part: feature:895694-895823:-1:exon
so has part: feature:893821-893908:-1:exon
so has part: feature:892568-892663:-1:exon
so has part: feature:892070-892268:-1:exon
so has part: feature:891057-891195:-1:exon
so has part: feature:890348-890415:-1:exon
so has part: feature:889513-889609:-1:exon
so has part: feature:888694-888765:-1:exon
so has part: feature:887574-887736:-1:exon
so has part: feature:887303-887432:-1:exon
so has part: feature:886914-887024:-1:exon
so has part: feature:886236-886815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901238-901748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898879-898986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896776-896892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895694-895823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893821-893908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892568-892663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892070-892268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891057-891195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890348-890415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889513-889609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888694-888765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887574-887736:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887303-887432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886914-887024:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886236-886815:-1:exon

LOC117039587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PLK2-like isoform X3
translation: MGRMEHPAWRRAEGESLKYFIEDPSTGTLYRRGQLLGKVEREIELHSQLKHRNVVGFHRHFADQENIYMVLEYCSRKSLAHILKVRKTLTEPEVRFYLKQVIAGLQYLHQQGIIHRDLKLSNFFITKTMQVKIGDLGLATREEQASRRRGVVCGTPNYLAPEVIAKKGHSFKSDVWALGCIMYTALTGCSPFEITHKQEMYRCIREGRYPTPSRLSPSARGLIAKLLAPNPESRPTLEETLAHEFFTQGFTPTQLPSRACHSAPLFMLPNPLRKFFQKVAKVFLRGTLCQETRTVSPPPQEAEGMLPPGTPAETPSLEVEEESQNGTEDPATFPVCLLMRGSLNVSREEADAERSMIAKVDEVLRTCLKTIPLAEEDPEGPPRPGPIQMVTKWVDYSNKYGFSYLLSGGSTGVLLADGTHIALCPQRQRVCYCPELHEASSFPRRDVPPSLTMKMGILHFFSRYMQQRLLEGGHQQASPATSLDNLCLLHFAKSQEALLMLFSDGTLQVNFYHDRTKLVLSPTSAGGYLLTFVDRQRQSRTFPLETLVLRGWTIPLRERLSYARSMLHCL
SIO_010081: LOC117039587
subclass of: SO_0000673
so part of: LOC117039587
location: complement(join(886627..886815,886914..887024,887303..887432,887574..887736,888694..888765,889513..889609,890348..890415,891057..891195,892070..892268,892568..892663,893821..893908,895694..895823,896776..896892,901238..901351))
location: region:886627-901351:-1
so has part: feature:901238-901351:-1:exon
so has part: feature:896776-896892:-1:exon
so has part: feature:895694-895823:-1:exon
so has part: feature:893821-893908:-1:exon
so has part: feature:892568-892663:-1:exon
so has part: feature:892070-892268:-1:exon
so has part: feature:891057-891195:-1:exon
so has part: feature:890348-890415:-1:exon
so has part: feature:889513-889609:-1:exon
so has part: feature:888694-888765:-1:exon
so has part: feature:887574-887736:-1:exon
so has part: feature:887303-887432:-1:exon
so has part: feature:886914-887024:-1:exon
so has part: feature:886627-886815:-1:exon

XP_032992642.1
type: Protein
SIO_000068: ncbiprotein

position:886627:-1
position: 886627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901351:-1
position: 901351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901238-901351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896776-896892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895694-895823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893821-893908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892568-892663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892070-892268:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891057-891195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890348-890415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889513-889609:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888694-888765:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887574-887736:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887303-887432:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886914-887024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886627-886815:-1:exon

LOC117039587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PLK2-like isoform X2
translation: MGRMEHPAWRRAEGESLKYFIEDPSTGTLYRRGQLLGKGAFGRCYKFTDTSTNKVYAVKVVPQSRVSRLDNRGKVEREIELHSQLKHRNVVGFHRHFADQENIYMVLEYCSRKSLAHILKVRKTLTEPEVRFYLKQVIAGLQYLHQQGIIHRDLKLSNFFITKTMQVKIGDLGLATREEQASRRRGVVCGTPNYLAPEVIAKKGHSFKSDVWALGCIMYTALTGCSPFEITHKQEMYRCIREGRYPTPSRLSPSARGLIAKLLAPNPESRPTLEETLAHEFFTQGFTPTQLPSRACHSAPLFMLPNPLRKFFQKVAKVFLRGTLCQETRTVSPPPQEAEGMLPPGTPAETPSLEVEEESQNGTEDPATFPVCLLMRGSLNVSREEADAERSMIAKVDEVLRTCLKTIPLEEDPEGPPRPGPIQMVTKWVDYSNKYGFSYLLSGGSTGVLLADGTHIALCPQRQRVCYCPELHEASSFPRRDVPPSLTMKMGILHFFSRYMQQRLLEGGHQQASPATSLDNLCLLHFAKSQEALLMLFSDGTLQVNFYHDRTKLVLSPTSAGGYLLTFVDRQRQSRTFPLETLVLRGWTIPLRERLSYARSMLHCL
SIO_010081: LOC117039587
subclass of: SO_0000673
so part of: LOC117039587
location: complement(join(886627..886815,886914..887024,887303..887432,887574..887733,888694..888765,889513..889609,890348..890415,891057..891195,892070..892268,892568..892663,893821..893908,895694..895823,896776..896892,898879..898986,901238..901351))
location: region:886627-901351:-1
so has part: feature:901238-901351:-1:exon
so has part: feature:898879-898986:-1:exon
so has part: feature:896776-896892:-1:exon
so has part: feature:895694-895823:-1:exon
so has part: feature:893821-893908:-1:exon
so has part: feature:892568-892663:-1:exon
so has part: feature:892070-892268:-1:exon
so has part: feature:891057-891195:-1:exon
so has part: feature:890348-890415:-1:exon
so has part: feature:889513-889609:-1:exon
so has part: feature:888694-888765:-1:exon
so has part: feature:887574-887733:-1:exon
so has part: feature:887303-887432:-1:exon
so has part: feature:886914-887024:-1:exon
so has part: feature:886627-886815:-1:exon

XP_032992641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:901238-901351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898879-898986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896776-896892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895694-895823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893821-893908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892568-892663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892070-892268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891057-891195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890348-890415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889513-889609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888694-888765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887574-887733:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887303-887432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886914-887024:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886627-886815:-1:exon

LOC117039587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PLK2-like isoform X1
translation: MGRMEHPAWRRAEGESLKYFIEDPSTGTLYRRGQLLGKGAFGRCYKFTDTSTNKVYAVKVVPQSRVSRLDNRGKVEREIELHSQLKHRNVVGFHRHFADQENIYMVLEYCSRKSLAHILKVRKTLTEPEVRFYLKQVIAGLQYLHQQGIIHRDLKLSNFFITKTMQVKIGDLGLATREEQASRRRGVVCGTPNYLAPEVIAKKGHSFKSDVWALGCIMYTALTGCSPFEITHKQEMYRCIREGRYPTPSRLSPSARGLIAKLLAPNPESRPTLEETLAHEFFTQGFTPTQLPSRACHSAPLFMLPNPLRKFFQKVAKVFLRGTLCQETRTVSPPPQEAEGMLPPGTPAETPSLEVEEESQNGTEDPATFPVCLLMRGSLNVSREEADAERSMIAKVDEVLRTCLKTIPLAEEDPEGPPRPGPIQMVTKWVDYSNKYGFSYLLSGGSTGVLLADGTHIALCPQRQRVCYCPELHEASSFPRRDVPPSLTMKMGILHFFSRYMQQRLLEGGHQQASPATSLDNLCLLHFAKSQEALLMLFSDGTLQVNFYHDRTKLVLSPTSAGGYLLTFVDRQRQSRTFPLETLVLRGWTIPLRERLSYARSMLHCL
SIO_010081: LOC117039587
subclass of: SO_0000673
so part of: LOC117039587
location: complement(join(886627..886815,886914..887024,887303..887432,887574..887736,888694..888765,889513..889609,890348..890415,891057..891195,892070..892268,892568..892663,893821..893908,895694..895823,896776..896892,898879..898986,901238..901351))
location: region:886627-901351:-1
so has part: feature:901238-901351:-1:exon
so has part: feature:898879-898986:-1:exon
so has part: feature:896776-896892:-1:exon
so has part: feature:895694-895823:-1:exon
so has part: feature:893821-893908:-1:exon
so has part: feature:892568-892663:-1:exon
so has part: feature:892070-892268:-1:exon
so has part: feature:891057-891195:-1:exon
so has part: feature:890348-890415:-1:exon
so has part: feature:889513-889609:-1:exon
so has part: feature:888694-888765:-1:exon
so has part: feature:887574-887736:-1:exon
so has part: feature:887303-887432:-1:exon
so has part: feature:886914-887024:-1:exon
so has part: feature:886627-886815:-1:exon

XP_032992640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:901238-901351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898879-898986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896776-896892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895694-895823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893821-893908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892568-892663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892070-892268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891057-891195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890348-890415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889513-889609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888694-888765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887574-887736:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887303-887432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886914-887024:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886627-886815:-1:exon

ADAMTSL5
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: ADAMTSL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 916979..935936
location: region:916979-935936:1
so has part: feature:916979-935936:1:exon
subclass of: SO_0000010

117039622
type: Gene
SIO_000068: ncbigene

position:916979:1
position: 916979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935936:1
position: 935936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916979-935936:1:exon

ADAMTSL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: ADAMTSL5
product: ADAMTS like 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033136798.1
SIO_010081: ADAMTSL5
subclass of: SO_0000673
so part of: ADAMTSL5
location: join(916979..917252,922248..922308,926780..926916,927949..928009,929150..929258,930046..930173,930652..930775,932323..932406,932991..933154,933254..933497,934510..934581,934924..935936)
location: region:916979-935936:1
so has part: feature:916979-917252:1:exon
so has part: feature:922248-922308:1:exon
so has part: feature:926780-926916:1:exon
so has part: feature:927949-928009:1:exon
so has part: feature:929150-929258:1:exon
so has part: feature:930046-930173:1:exon
so has part: feature:930652-930775:1:exon
so has part: feature:932323-932406:1:exon
so has part: feature:932991-933154:1:exon
so has part: feature:933254-933497:1:exon
so has part: feature:934510-934581:1:exon
so has part: feature:934924-935936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916979-917252:1:exon

position:917252:1
position: 917252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922248-922308:1:exon

position:922248:1
position: 922248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922308:1
position: 922308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:926780-926916:1:exon

position:926780:1
position: 926780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926916:1
position: 926916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:927949-928009:1:exon

position:927949:1
position: 927949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928009:1
position: 928009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:929150-929258:1:exon

position:929150:1
position: 929150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929258:1
position: 929258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:930046-930173:1:exon

position:930046:1
position: 930046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930173:1
position: 930173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:930652-930775:1:exon

position:930652:1
position: 930652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930775:1
position: 930775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:932323-932406:1:exon

position:932323:1
position: 932323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932406:1
position: 932406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:932991-933154:1:exon

position:932991:1
position: 932991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933154:1
position: 933154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:933254-933497:1:exon

position:933254:1
position: 933254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933497:1
position: 933497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:934510-934581:1:exon

position:934510:1
position: 934510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934581:1
position: 934581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:934924-935936:1:exon

position:934924:1
position: 934924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAMTSL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: ADAMTSL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADAMTS-like protein 5 isoform X1
translation: MSLGAGDPLAEAAWTSGAPGRPLYIKVPGRSGAAMRAGRRGDAALGRIGRPAGAREGPAGQERAASDGAGSISPLTTAFLIWLTFLCTVQGTDHMGARPRQRRQLGHGAWTHWGSWSACSSTCGDGASFRTRRCIRFPEEEMCKGPLRQYRVCELDECPPGSVPFRAVQCSLYDGKPVLGSQTPYQWVPFHGAPNLCDLNCLAVGHNFYYTFGRVLDGTRCSPDSRDLCISGRCLRAGCDGLLGSESQADACGVCGGRNESCVLVQHVFRAAFPSSGYFGYKNVTRIPAGARHIKVTDRSRNYLALMTANQRYIINGDWAIDWPGTYEVAGTQVRYTRTADAHESLEAAGPIQEDLLVMVLFQEPNAGIEFQFWLPNERFHSIQSDTSPLRQPQTREVGDSPPREQQAILPAPPSQNDIARKTPQREGTPLPAKVPPGSSGQCGACNSPRGKSQRIHHYCSSDFVFRARILSKRRVGQETRYDVQVLHTYRNRFPVVRREFVWVPDACDCPLLAEQREYVLMARRHVNYEHTLNRLLLPRGGYARPWTPREDLQLRDVPKHCSQGGVAPRGTPP
SIO_010081: ADAMTSL5
subclass of: SO_0000673
so part of: ADAMTSL5
location: join(917044..917252,922248..922308,926780..926916,927949..928009,929150..929258,930046..930173,930652..930775,932323..932406,932991..933154,933254..933497,934510..934581,934924..935255)
location: region:917044-935255:1
so has part: feature:917044-917252:1:exon
so has part: feature:922248-922308:1:exon
so has part: feature:926780-926916:1:exon
so has part: feature:927949-928009:1:exon
so has part: feature:929150-929258:1:exon
so has part: feature:930046-930173:1:exon
so has part: feature:930652-930775:1:exon
so has part: feature:932323-932406:1:exon
so has part: feature:932991-933154:1:exon
so has part: feature:933254-933497:1:exon
so has part: feature:934510-934581:1:exon
so has part: feature:934924-935255:1:exon

XP_032992689.1
type: Protein
SIO_000068: ncbiprotein

position:917044:1
position: 917044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935255:1
position: 935255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917044-917252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922248-922308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:926780-926916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:927949-928009:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929150-929258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930046-930173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930652-930775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:932323-932406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:932991-933154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:933254-933497:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:934510-934581:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:934924-935255:1:exon

ADAMTSL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: ADAMTSL5
product: ADAMTS like 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033136800.1
SIO_010081: ADAMTSL5
subclass of: SO_0000673
so part of: ADAMTSL5
location: join(917181..917252,922248..922308,926777..926916,927949..928009,929150..929258,930046..930173,930652..930775,932323..932406,932991..933154,933254..933497,934510..934581,934924..935936)
location: region:917181-935936:1
so has part: feature:917181-917252:1:exon
so has part: feature:922248-922308:1:exon
so has part: feature:926777-926916:1:exon
so has part: feature:927949-928009:1:exon
so has part: feature:929150-929258:1:exon
so has part: feature:930046-930173:1:exon
so has part: feature:930652-930775:1:exon
so has part: feature:932323-932406:1:exon
so has part: feature:932991-933154:1:exon
so has part: feature:933254-933497:1:exon
so has part: feature:934510-934581:1:exon
so has part: feature:934924-935936:1:exon

position:917181:1
position: 917181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917181-917252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922248-922308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:926777-926916:1:exon

position:926777:1
position: 926777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:927949-928009:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929150-929258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930046-930173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930652-930775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:932323-932406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:932991-933154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:933254-933497:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:934510-934581:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:934924-935936:1:exon

ADAMTSL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: ADAMTSL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADAMTS-like protein 5 isoform X2
translation: MGARPRQRRQLGHGAWTHWGSWSACSSTCGDGASFRTRRCIRFPEEEMCKGPLRQYRVCELDECPPGSVPFRAVQCSLYDGKPVLGSQTPYQWVPFHGAPNLCDLNCLAVGHNFYYTFGRVLDGTRCSPDSRDLCISGRCLRAGCDGLLGSESQADACGVCGGRNESCVLVQHVFRAAFPSSGYFGYKNVTRIPAGARHIKVTDRSRNYLALMTANQRYIINGDWAIDWPGTYEVAGTQVRYTRTADAHESLEAAGPIQEDLLVMVLFQEPNAGIEFQFWLPNERFHSIQSDTSPLRQPQTREVGDSPPREQQAILPAPPSQNDIARKTPQREGTPLPAKVPPGSSGQCGACNSPRGKSQRIHHYCSSDFVFRARILSKRRVGQETRYDVQVLHTYRNRFPVVRREFVWVPDACDCPLLAEQREYVLMARRHVNYEHTLNRLLLPRGGYARPWTPREDLQLRDVPKHCSQGGVAPRGTPP
SIO_010081: ADAMTSL5
subclass of: SO_0000673
so part of: ADAMTSL5
location: join(926792..926916,927949..928009,929150..929258,930046..930173,930652..930775,932323..932406,932991..933154,933254..933497,934510..934581,934924..935255)
location: region:926792-935255:1
so has part: feature:926792-926916:1:exon
so has part: feature:927949-928009:1:exon
so has part: feature:929150-929258:1:exon
so has part: feature:930046-930173:1:exon
so has part: feature:930652-930775:1:exon
so has part: feature:932323-932406:1:exon
so has part: feature:932991-933154:1:exon
so has part: feature:933254-933497:1:exon
so has part: feature:934510-934581:1:exon
so has part: feature:934924-935255:1:exon

XP_032992691.1
type: Protein
SIO_000068: ncbiprotein

position:926792:1
position: 926792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926792-926916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927949-928009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929150-929258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930046-930173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930652-930775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:932323-932406:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932991-933154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:933254-933497:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:934510-934581:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:934924-935255:1:exon

LOC117039513
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(937334..941540)
location: region:937334-941540:-1
so has part: feature:937334-941540:-1:exon
subclass of: SO_0000010

117039513
type: Gene
SIO_000068: ncbigene

position:937334:-1
position: 937334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941540:-1
position: 941540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937334-941540:-1:exon

LOC117039513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039513
product: kelch-like protein 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033136648.1
SIO_010081: LOC117039513
subclass of: SO_0000673
so part of: LOC117039513
location: complement(join(937334..937732,939099..939513,940526..941540))
location: region:937334-941540:-1
so has part: feature:940526-941540:-1:exon
so has part: feature:939099-939513:-1:exon
so has part: feature:937334-937732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:940526-941540:-1:exon

position:940526:-1
position: 940526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939099-939513:-1:exon

position:939099:-1
position: 939099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939513:-1
position: 939513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937334-937732:-1:exon

position:937732:-1
position: 937732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 21
translation: MAGLEGASSGDQSGGHVVLEVGDRQFPVERWALARYSRYFEAMFFGGTRERTAPRIRIQGLDPTAFQALLAFTQTGSLLLDRNNVTDLLEAADFLQLDCAKRRCEAFLERELHVSNCLGFLAYAQCFSCAHLQAAALSVVLSHWAEVSSGEEFMEAPAETLRALLRSDDLFVSREEAAFEALLRWVAADPAGREAVFLELAGLIRGPFLSLPFLERLVRRCKSPPGQDTSGRLLQKLDACPPASWRQAGLSPCVGRSHEVLFVLAGKHDQEQQELFQFQPKTQVWQSRAPLQRKNLTQYAVAAIGNFLFVTGGYFREEFSWCSVGWVLIYNSWDNSWLDGPAMKTARHSHCAVGVGFHLYVMGGSTDEGAVTPEVERLAPADSSWEVTSPLAHPVERAGAVSVGTRVYVVCGLDENGDVCRAVQRLDVETDIWDVVSFSPLPRYDLCVVALNGAIYTVGGGAFRFDVDSGEWTPVEEECLARRFFTGCSAANGRIYLLAQRQGNAAIPNMVLLDPYLEMCQEVDSKLPCPLPIHGMASVRRFDICA
SIO_010081: LOC117039513
subclass of: SO_0000673
so part of: LOC117039513
location: complement(join(937420..937732,939099..939513,940526..941438))
location: region:937420-941438:-1
so has part: feature:940526-941438:-1:exon
so has part: feature:939099-939513:-1:exon
so has part: feature:937420-937732:-1:exon

XP_032992539.1
type: Protein
SIO_000068: ncbiprotein

position:937420:-1
position: 937420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941438:-1
position: 941438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940526-941438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939099-939513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937420-937732:-1:exon

LSM7
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LSM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(942853..945663)
location: region:942853-945663:-1
so has part: feature:942853-945663:-1:exon
subclass of: SO_0000010

117039414
type: Gene
SIO_000068: ncbigene

position:942853:-1
position: 942853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945663:-1
position: 945663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942853-945663:-1:exon

LSM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LSM7
product: LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_033136514.1
SIO_010081: LSM7
subclass of: SO_0000673
so part of: LSM7
location: complement(join(942853..943606,944147..944218,944453..944543,945543..945663))
location: region:942853-945663:-1
so has part: feature:945543-945663:-1:exon
so has part: feature:944453-944543:-1:exon
so has part: feature:944147-944218:-1:exon
so has part: feature:942853-943606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945543-945663:-1:exon

position:945543:-1
position: 945543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944453-944543:-1:exon

position:944453:-1
position: 944453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944543:-1
position: 944543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:944147-944218:-1:exon

position:944147:-1
position: 944147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944218:-1
position: 944218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:942853-943606:-1:exon

position:943606:-1
position: 943606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LSM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm7
translation: MPVESKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
SIO_010081: LSM7
subclass of: SO_0000673
so part of: LSM7
location: complement(join(943464..943606,944147..944218,944453..944543,945543..945566))
location: region:943464-945566:-1
so has part: feature:945543-945566:-1:exon
so has part: feature:944453-944543:-1:exon
so has part: feature:944147-944218:-1:exon
so has part: feature:943464-943606:-1:exon

XP_032992405.1
type: Protein
SIO_000068: ncbiprotein

position:943464:-1
position: 943464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945566:-1
position: 945566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945543-945566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944453-944543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:944147-944218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943464-943606:-1:exon

SPPL2B
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SPPL2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 946007..961725
location: region:946007-961725:1
so has part: feature:946007-961725:1:exon
subclass of: SO_0000010

117039412
type: Gene
SIO_000068: ncbigene

position:946007:1
position: 946007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961725:1
position: 961725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946007-961725:1:exon

SPPL2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SPPL2B
product: signal peptide peptidase like 2B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033136512.1
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(946007..946132,949646..949765,951282..951464,952430..952519,952719..952858,953701..953843,954549..954645,956096..956212,956581..956662,956949..957023,957259..957321,957764..957863,958271..958348,959888..960048,960923..961725)
location: region:946007-961725:1
so has part: feature:946007-946132:1:exon
so has part: feature:949646-949765:1:exon
so has part: feature:951282-951464:1:exon
so has part: feature:952430-952519:1:exon
so has part: feature:952719-952858:1:exon
so has part: feature:953701-953843:1:exon
so has part: feature:954549-954645:1:exon
so has part: feature:956096-956212:1:exon
so has part: feature:956581-956662:1:exon
so has part: feature:956949-957023:1:exon
so has part: feature:957259-957321:1:exon
so has part: feature:957764-957863:1:exon
so has part: feature:958271-958348:1:exon
so has part: feature:959888-960048:1:exon
so has part: feature:960923-961725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946007-946132:1:exon

position:946132:1
position: 946132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949646-949765:1:exon

position:949646:1
position: 949646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949765:1
position: 949765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:951282-951464:1:exon

position:951282:1
position: 951282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951464:1
position: 951464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:952430-952519:1:exon

position:952430:1
position: 952430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952519:1
position: 952519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:952719-952858:1:exon

position:952719:1
position: 952719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952858:1
position: 952858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:953701-953843:1:exon

position:953701:1
position: 953701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953843:1
position: 953843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:954549-954645:1:exon

position:954549:1
position: 954549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954645:1
position: 954645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:956096-956212:1:exon

position:956096:1
position: 956096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956212:1
position: 956212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:956581-956662:1:exon

position:956581:1
position: 956581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956662:1
position: 956662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:956949-957023:1:exon

position:956949:1
position: 956949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957023:1
position: 957023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:957259-957321:1:exon

position:957259:1
position: 957259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957321:1
position: 957321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:957764-957863:1:exon

position:957764:1
position: 957764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957863:1
position: 957863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:958271-958348:1:exon

position:958271:1
position: 958271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958348:1
position: 958348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:959888-960048:1:exon

position:959888:1
position: 959888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960048:1
position: 960048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:960923-961725:1:exon

position:960923:1
position: 960923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPPL2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SPPL2B
product: signal peptide peptidase like 2B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033136513.1
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(946007..946132,949646..949765,951282..951464,952430..952519,952719..952858,953701..953843,954549..954645,956096..956212,956581..956662,956949..957023,957764..957863,958271..958348,959888..960048,960923..961725)
location: region:946007-961725:1
so has part: feature:946007-946132:1:exon
so has part: feature:949646-949765:1:exon
so has part: feature:951282-951464:1:exon
so has part: feature:952430-952519:1:exon
so has part: feature:952719-952858:1:exon
so has part: feature:953701-953843:1:exon
so has part: feature:954549-954645:1:exon
so has part: feature:956096-956212:1:exon
so has part: feature:956581-956662:1:exon
so has part: feature:956949-957023:1:exon
so has part: feature:957764-957863:1:exon
so has part: feature:958271-958348:1:exon
so has part: feature:959888-960048:1:exon
so has part: feature:960923-961725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946007-946132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949646-949765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951282-951464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:952430-952519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952719-952858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:953701-953843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954549-954645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956096-956212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:956581-956662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956949-957023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:957764-957863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:958271-958348:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:959888-960048:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960923-961725:1:exon

SPPL2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 80427
gene: SPPL2B
product: signal peptide peptidase like 2B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_004425777.1
SIO_010081: SPPL2B
so part of: SPPL2B
location: join(946007..946132,949646..949765,951282..951464,952430..952519,952719..952858,953701..953843,954549..954645,956096..956212,956581..956662,956949..957023,957259..957321,957764..957863,958271..958348,959888..960123,960923..961029)
location: region:946007-961029:1
so has part: feature:946007-946132:1:exon
so has part: feature:949646-949765:1:exon
so has part: feature:951282-951464:1:exon
so has part: feature:952430-952519:1:exon
so has part: feature:952719-952858:1:exon
so has part: feature:953701-953843:1:exon
so has part: feature:954549-954645:1:exon
so has part: feature:956096-956212:1:exon
so has part: feature:956581-956662:1:exon
so has part: feature:956949-957023:1:exon
so has part: feature:957259-957321:1:exon
so has part: feature:957764-957863:1:exon
so has part: feature:958271-958348:1:exon
so has part: feature:959888-960123:1:exon
so has part: feature:960923-961029:1:exon

position:961029:1
position: 961029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946007-946132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949646-949765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951282-951464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:952430-952519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952719-952858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:953701-953843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954549-954645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956096-956212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:956581-956662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956949-957023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:957259-957321:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:957764-957863:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:958271-958348:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:959888-960123:1:exon

position:960123:1
position: 960123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:960923-961029:1:exon

SPPL2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SPPL2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptide peptidase-like 2B isoform X1
translation: MAAAASLGRRALLGSWLLLAVQVSCEFGMVRVFSEKGSSKGKDYCILFNSQWAHLPHDLGKASLLQLQDQTVSVLCAPSDVPDGGFSSTIPMVMRGNCTFYEKVRLAQINGARGLLIVSRERLVPPAGNRSQYEEIDIPVALLSYADMLDIGRSFGPSVKVAMYAPNEPVLDYNMVIIFVMAVGTVAVGGYWAGSRDVKKRYMKHKRDDGMEKHEDETVDVTPIMICVFVVMCCSMLVLLYYFYDHLVYAIIGIFCLAASIGLYSCLSPFVRRFPLGKCRVPDNNLPYFHKRPQVRMLLLAVFCVAVSLVWGIFRNEDQWAWILQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPYLTKTGESIMVEVAAGPTDSSTHEKLPMVLKVPRLNFSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGLGLLVTFVALALMQKGQPALLYLVPSTLLTSFVVALWRKELPMFWTGSGFAKDLPQPPLVISPVSCPAAPKEETSPSSRPEAKDQPATPTPTEEMVGGGSPPDGGGEESGCAPFLEKEHEEAVAAQTEPTAASPQPPHIEEPGAREDGRKIPSD
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(946067..946132,949646..949765,951282..951464,952430..952519,952719..952858,953701..953843,954549..954645,956096..956212,956581..956662,956949..957023,957259..957321,957764..957863,958271..958348,959888..960048,960923..961234)
location: region:946067-961234:1
so has part: feature:946067-946132:1:exon
so has part: feature:949646-949765:1:exon
so has part: feature:951282-951464:1:exon
so has part: feature:952430-952519:1:exon
so has part: feature:952719-952858:1:exon
so has part: feature:953701-953843:1:exon
so has part: feature:954549-954645:1:exon
so has part: feature:956096-956212:1:exon
so has part: feature:956581-956662:1:exon
so has part: feature:956949-957023:1:exon
so has part: feature:957259-957321:1:exon
so has part: feature:957764-957863:1:exon
so has part: feature:958271-958348:1:exon
so has part: feature:959888-960048:1:exon
so has part: feature:960923-961234:1:exon

XP_032992403.1
type: Protein
SIO_000068: ncbiprotein

position:946067:1
position: 946067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961234:1
position: 961234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946067-946132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949646-949765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951282-951464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:952430-952519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952719-952858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:953701-953843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954549-954645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956096-956212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:956581-956662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956949-957023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:957259-957321:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:957764-957863:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:958271-958348:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:959888-960048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:960923-961234:1:exon

SPPL2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SPPL2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptide peptidase-like 2B isoform X2
translation: MAAAASLGRRALLGSWLLLAVQVSCEFGMVRVFSEKGSSKGKDYCILFNSQWAHLPHDLGKASLLQLQDQTVSVLCAPSDVPDGGFSSTIPMVMRGNCTFYEKVRLAQINGARGLLIVSRERLVPPAGNRSQYEEIDIPVALLSYADMLDIGRSFGPSVKVAMYAPNEPVLDYNMVIIFVMAVGTVAVGGYWAGSRDVKKRYMKHKRDDGMEKHEDETVDVTPIMICVFVVMCCSMLVLLYYFYDHLVYAIIGIFCLAASIGLYSCLSPFVRRFPLGKCRVPDNNLPYFHKRPQVRMLLLAVFCVAVSLVWGIFRNEDQWAWILQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPYLTKLPMVLKVPRLNFSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGLGLLVTFVALALMQKGQPALLYLVPSTLLTSFVVALWRKELPMFWTGSGFAKDLPQPPLVISPVSCPAAPKEETSPSSRPEAKDQPATPTPTEEMVGGGSPPDGGGEESGCAPFLEKEHEEAVAAQTEPTAASPQPPHIEEPGAREDGRKIPSD
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(946067..946132,949646..949765,951282..951464,952430..952519,952719..952858,953701..953843,954549..954645,956096..956212,956581..956662,956949..957023,957764..957863,958271..958348,959888..960048,960923..961234)
location: region:946067-961234:1
so has part: feature:946067-946132:1:exon
so has part: feature:949646-949765:1:exon
so has part: feature:951282-951464:1:exon
so has part: feature:952430-952519:1:exon
so has part: feature:952719-952858:1:exon
so has part: feature:953701-953843:1:exon
so has part: feature:954549-954645:1:exon
so has part: feature:956096-956212:1:exon
so has part: feature:956581-956662:1:exon
so has part: feature:956949-957023:1:exon
so has part: feature:957764-957863:1:exon
so has part: feature:958271-958348:1:exon
so has part: feature:959888-960048:1:exon
so has part: feature:960923-961234:1:exon

XP_032992404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:946067-946132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949646-949765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951282-951464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:952430-952519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952719-952858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:953701-953843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954549-954645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956096-956212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:956581-956662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956949-957023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:957764-957863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:958271-958348:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:959888-960048:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960923-961234:1:exon

TMPRSS9
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: TMPRSS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 974660..986460
location: region:974660-986460:1
so has part: feature:974660-986460:1:exon
subclass of: SO_0000010

117039542
type: Gene
SIO_000068: ncbigene

position:974660:1
position: 974660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986460:1
position: 986460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974660-986460:1:exon

TMPRSS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: TMPRSS9
product: transmembrane serine protease 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136693.1
SIO_010081: TMPRSS9
subclass of: SO_0000673
so part of: TMPRSS9
location: join(974660..974719,974971..975098,975981..976048,976154..976320,976736..976777,977137..977250,978126..978297,978764..979041,980277..980413,980510..980822,980923..981094,981940..982211,983230..983366,983649..983970,984464..984731,985263..985528,985714..985850,986060..986460)
location: region:974660-986460:1
so has part: feature:974660-974719:1:exon
so has part: feature:974971-975098:1:exon
so has part: feature:975981-976048:1:exon
so has part: feature:976154-976320:1:exon
so has part: feature:976736-976777:1:exon
so has part: feature:977137-977250:1:exon
so has part: feature:978126-978297:1:exon
so has part: feature:978764-979041:1:exon
so has part: feature:980277-980413:1:exon
so has part: feature:980510-980822:1:exon
so has part: feature:980923-981094:1:exon
so has part: feature:981940-982211:1:exon
so has part: feature:983230-983366:1:exon
so has part: feature:983649-983970:1:exon
so has part: feature:984464-984731:1:exon
so has part: feature:985263-985528:1:exon
so has part: feature:985714-985850:1:exon
so has part: feature:986060-986460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974660-974719:1:exon

position:974719:1
position: 974719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974971-975098:1:exon

position:974971:1
position: 974971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975098:1
position: 975098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975981-976048:1:exon

position:975981:1
position: 975981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976048:1
position: 976048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:976154-976320:1:exon

position:976154:1
position: 976154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976320:1
position: 976320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:976736-976777:1:exon

position:976736:1
position: 976736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976777:1
position: 976777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:977137-977250:1:exon

position:977137:1
position: 977137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977250:1
position: 977250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:978126-978297:1:exon

position:978126:1
position: 978126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978297:1
position: 978297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:978764-979041:1:exon

position:978764:1
position: 978764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979041:1
position: 979041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:980277-980413:1:exon

position:980277:1
position: 980277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980413:1
position: 980413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:980510-980822:1:exon

position:980510:1
position: 980510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980822:1
position: 980822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:980923-981094:1:exon

position:980923:1
position: 980923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981094:1
position: 981094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:981940-982211:1:exon

position:981940:1
position: 981940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982211:1
position: 982211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:983230-983366:1:exon

position:983230:1
position: 983230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983366:1
position: 983366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:983649-983970:1:exon

position:983649:1
position: 983649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983970:1
position: 983970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:984464-984731:1:exon

position:984464:1
position: 984464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984731:1
position: 984731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:985263-985528:1:exon

position:985263:1
position: 985263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985528:1
position: 985528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:985714-985850:1:exon

position:985714:1
position: 985714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985850:1
position: 985850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:986060-986460:1:exon

position:986060:1
position: 986060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMPRSS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: TMPRSS9
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:984472..984474,aa:OTHER)
product: LOW QUALITY PROTEIN: transmembrane protease serine 9
translation: MAFLVKQEFLADHLVELQGLRYESSLQCPSSSYHRTLTPVLERLFKSSFQNSALEGTCARCSILQYRKGNASILVHFRLWFSSQPLSPDAEEQALERGLAAALGNGGIALPSYGTIWAASLTGLSSDSPSGTGLKSGTCPGTAFTCHSGQCVPRENVECDDRSDCLDGSDEAECDCGSRPAMQAANRIVGGSEATRGEFPWQVSLRENNEHFCGATILAAKWLVSAAHCFNEFQDPGTWTAHAGTVWLSSSSESSAVKAGVSHILKHPSYDTDTADYDVALLALSEPLPFGKYVQPACLPSSSHIFPSGKKCYISGWGYLKEDFLVKPELLQKAVVELLDQTLCASLYSNALTDRMLCAGYLEGKVDSCQGDSGGPLVCEEPSGRFFLAGIVSWGIGCAEAKRPGVYARVTRLRNWIHNTMATFTDPPGTTLPTTASTTLLPLASTKGTSTTGKPLPSPTTAGGRPAGTVPRPQECGRRPGFSKPIKIVGGLDASRGEVPWQVSLKEGLHHFCGATIIGERWLLSAAHCFNHTKVEHLTAFAGTTWLSAAESSSVKVSVRQVVPHPSYNPALLDFDVAVLELERPLPFGKVIQPICLPLAIHKFPVGRKCMISGWGSLQEGNASKPENLQRASVGIIDQKTCNVLYNFSLTEQMICAGFLDGKVDSCQGDSGGPLACEETPGVFYLAGLVSWGVGCAQARRPGVYTRITKLKAWILETISPCPSSTTTAATTSSTTTSGSASSSPSLPLASQRTTQATPSTARPPTNTPRATQFAVHIXLCSPTTRQGRGLTRAQASSQPASLPTHLDCGSTSALAFSKIVGGTGAARGEWPWQASLWLRRKEHKCGAVVVADRWLLSAAHCFDVYSDPKMWVAVLGTPFLSGLDGRVEKVFQIHKHPFYNIYTLDYDVALLELASPLSFTSTIKPICLPDHAHLFGQGARCVITGWGSTKEGGLMARQLQKAAVNLIGEHDCRRFYPVQISSRMVCAGFLQGSVDSCSGDAGGPLACKEASGRWFLAGITSWGYGCARPYFPGVYARVTAVRGWIAQNLKA
SIO_010081: TMPRSS9
subclass of: SO_0000673
so part of: TMPRSS9
location: join(974716..974719,974971..975098,975981..976048,976154..976320,976736..976777,977137..977250,978126..978297,978764..979041,980277..980413,980510..980822,980923..981094,981940..982211,983230..983366,983649..983970,984464..984731,985263..985528,985714..985850,986060..986221)
location: region:974716-986221:1
so has part: feature:974716-974719:1:exon
so has part: feature:974971-975098:1:exon
so has part: feature:975981-976048:1:exon
so has part: feature:976154-976320:1:exon
so has part: feature:976736-976777:1:exon
so has part: feature:977137-977250:1:exon
so has part: feature:978126-978297:1:exon
so has part: feature:978764-979041:1:exon
so has part: feature:980277-980413:1:exon
so has part: feature:980510-980822:1:exon
so has part: feature:980923-981094:1:exon
so has part: feature:981940-982211:1:exon
so has part: feature:983230-983366:1:exon
so has part: feature:983649-983970:1:exon
so has part: feature:984464-984731:1:exon
so has part: feature:985263-985528:1:exon
so has part: feature:985714-985850:1:exon
so has part: feature:986060-986221:1:exon

XP_032992584.1
type: Protein
SIO_000068: ncbiprotein

position:974716:1
position: 974716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986221:1
position: 986221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974716-974719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974971-975098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975981-976048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:976154-976320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976736-976777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:977137-977250:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:978126-978297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:978764-979041:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:980277-980413:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:980510-980822:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:980923-981094:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:981940-982211:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983230-983366:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983649-983970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984464-984731:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985263-985528:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985714-985850:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:986060-986221:1:exon

LINGO3
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LINGO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1013143..1021518
location: region:1013143-1021518:1
so has part: feature:1013143-1021518:1:exon
subclass of: SO_0000010

117039429
type: Gene
SIO_000068: ncbigene

position:1013143:1
position: 1013143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021518:1
position: 1021518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013143-1021518:1:exon

LINGO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LINGO3
product: leucine rich repeat and Ig domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033136537.1
SIO_010081: LINGO3
subclass of: SO_0000673
so part of: LINGO3
location: join(1013143..1013218,1018447..1021518)
location: region:1013143-1021518:1
so has part: feature:1013143-1013218:1:exon
so has part: feature:1018447-1021518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1013143-1013218:1:exon

position:1013218:1
position: 1013218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018447-1021518:1:exon

position:1018447:1
position: 1018447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LINGO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LINGO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
translation: MHCTMTCCCCFLVLVFHCVLLSTASVAACPARCDCIPQIKSVSCHRKRLTAIPEGIPTETKILELNKNRIRCLNSGDLSPFPLLEELDFSENIITSVEPGAFSNLLNLQVLRLRGNQLKLLPPGVFTKLSNLTVLDISENKIVILLDYTFQDLRSLRILDLGDNDLVYVSRKAFSGLLGLQQLTIEKCNLTDISAESLSRLQNLQALRLRHLSIATVEDQNFKKLCNLWQLEIDNWPFLEVISPNGFQGLNLTSLSITYTNITAVPTAALRNLGHLMYLNLSYNPISIVPKGAFRDLIRLRELHMVGALLALVEPQALYGLRQIRLLNLSNNFLSTLEESSFHSVNTLETLRVDRNPLVCDCRLLWILQRRKTLNFNGQPPMCSSPPEIQGDALHDFPDSVLFEYFTCQKPKIRDRKLQHITAYEGQAVSFLCRADGEPAPSIVWVSPQHRMITIRSTGRVAVLPSGTLEIRYTQVQDSGTYICIASNAGGNDTYFATLTVKGHSANGALYANRTLHLSDFNDTLHNNTQVFLKFTLDLKTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNHFSVEYSFRKVDGPTTAAGQGGARKFNMKMI
SIO_010081: LINGO3
subclass of: SO_0000673
so part of: LINGO3
location: 1018481..1020304
location: region:1018481-1020304:1
so has part: feature:1018481-1020304:1:exon

XP_032992428.1
type: Protein
SIO_000068: ncbiprotein

position:1018481:1
position: 1018481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020304:1
position: 1020304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018481-1020304:1:exon

LMNB2
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LMNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1027365..1040645
location: region:1027365-1040645:1
so has part: feature:1027365-1040645:1:exon
subclass of: SO_0000010

117039433
type: Gene
SIO_000068: ncbigene

position:1027365:1
position: 1027365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040645:1
position: 1040645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027365-1040645:1:exon

LMNB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LMNB2
product: lamin B2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033136544.1
SIO_010081: LMNB2
subclass of: SO_0000673
so part of: LMNB2
location: join(1027365..1027698,1028899..1029035,1031542..1031698,1032961..1033086,1033914..1034084,1034352..1034477,1035029..1035249,1035395..1035683,1036215..1036334,1036512..1036616,1037321..1040645)
location: region:1027365-1040645:1
so has part: feature:1027365-1027698:1:exon
so has part: feature:1028899-1029035:1:exon
so has part: feature:1031542-1031698:1:exon
so has part: feature:1032961-1033086:1:exon
so has part: feature:1033914-1034084:1:exon
so has part: feature:1034352-1034477:1:exon
so has part: feature:1035029-1035249:1:exon
so has part: feature:1035395-1035683:1:exon
so has part: feature:1036215-1036334:1:exon
so has part: feature:1036512-1036616:1:exon
so has part: feature:1037321-1040645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1027365-1027698:1:exon

position:1027698:1
position: 1027698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028899-1029035:1:exon

position:1028899:1
position: 1028899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029035:1
position: 1029035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1031542-1031698:1:exon

position:1031542:1
position: 1031542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031698:1
position: 1031698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1032961-1033086:1:exon

position:1032961:1
position: 1032961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033086:1
position: 1033086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1033914-1034084:1:exon

position:1033914:1
position: 1033914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034084:1
position: 1034084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1034352-1034477:1:exon

position:1034352:1
position: 1034352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034477:1
position: 1034477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1035029-1035249:1:exon

position:1035029:1
position: 1035029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035249:1
position: 1035249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1035395-1035683:1:exon

position:1035395:1
position: 1035395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035683:1
position: 1035683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1036215-1036334:1:exon

position:1036215:1
position: 1036215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036334:1
position: 1036334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1036512-1036616:1:exon

position:1036512:1
position: 1036512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036616:1
position: 1036616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1037321-1040645:1:exon

position:1037321:1
position: 1037321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LMNB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LMNB2
product: lamin B2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033136543.1
SIO_010081: LMNB2
subclass of: SO_0000673
so part of: LMNB2
location: join(1027366..1027698,1028899..1029035,1031542..1031698,1032961..1033086,1033914..1034084,1034352..1034477,1035029..1035249,1035395..1035683,1035808..1035915,1036215..1036334,1036512..1036616,1037321..1040645)
location: region:1027366-1040645:1
so has part: feature:1027366-1027698:1:exon
so has part: feature:1028899-1029035:1:exon
so has part: feature:1031542-1031698:1:exon
so has part: feature:1032961-1033086:1:exon
so has part: feature:1033914-1034084:1:exon
so has part: feature:1034352-1034477:1:exon
so has part: feature:1035029-1035249:1:exon
so has part: feature:1035395-1035683:1:exon
so has part: feature:1035808-1035915:1:exon
so has part: feature:1036215-1036334:1:exon
so has part: feature:1036512-1036616:1:exon
so has part: feature:1037321-1040645:1:exon

position:1027366:1
position: 1027366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027366-1027698:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028899-1029035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031542-1031698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032961-1033086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033914-1034084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034352-1034477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035029-1035249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035395-1035683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035808-1035915:1:exon

position:1035808:1
position: 1035808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035915:1
position: 1035915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1036215-1036334:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036512-1036616:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1037321-1040645:1:exon

LMNB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LMNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin-B2 isoform X1
translation: MSSSTPSAAPPAPSPGTPRASPSAGTPLSPTRISRLQEKEELRHLNDRLAHYIERVRALELENDRLLLRVSEKEEVVTREVTGIKALYESELSDARRVLDETARERAKLQIEIGKLRAELDELAKSYKKKDGEWSTSQGRIKELEVLFHRSEAELTATLTEKRNLEAEVADLRAQLAKSEDGHAVAKKQLEKETLMRVDLENRCQSLQEELDFRKSIFEEEVRETRKRHERQLVEVDSGRQPECESKISQTLEDLRQQHDEQVRLYKLELEQTYQAKLENAKLCSDQNDKAASAAREELKEARMRIESLSYQLSGLQKQANAAEDRIRELEELMAGEREKFRKMLDVKEREMTEMRDQMQQQLVEYQELLDVKLALDMEISAYRKLLEGEEERLKLSPSPSTRITVSRATSSSSSGISAARSSRGKRKRLEIAEELSGSGSSGFGTRSSSASSSSAFQTSQQASAKGSISIEDVDPEGKYVQLKNRSDKDQSLGNWRLKKKIGEGEEVAYKFTPKYVLRAGQMVTIWAADAGVAHSPPSVLVWKHQTSWGTGTSVRTYLVNSDGEEVAVRSLTQSSAVLQDNGEEDEEAEFGEEDLFHQQGDPRTTSRGCTVM
SIO_010081: LMNB2
subclass of: SO_0000673
so part of: LMNB2
location: join(1027459..1027698,1028899..1029035,1031542..1031698,1032961..1033086,1033914..1034084,1034352..1034477,1035029..1035249,1035395..1035683,1035808..1035915,1036215..1036334,1036512..1036616,1037321..1037362)
location: region:1027459-1037362:1
so has part: feature:1027459-1027698:1:exon
so has part: feature:1028899-1029035:1:exon
so has part: feature:1031542-1031698:1:exon
so has part: feature:1032961-1033086:1:exon
so has part: feature:1033914-1034084:1:exon
so has part: feature:1034352-1034477:1:exon
so has part: feature:1035029-1035249:1:exon
so has part: feature:1035395-1035683:1:exon
so has part: feature:1035808-1035915:1:exon
so has part: feature:1036215-1036334:1:exon
so has part: feature:1036512-1036616:1:exon
so has part: feature:1037321-1037362:1:exon

XP_032992434.1
type: Protein
SIO_000068: ncbiprotein

position:1027459:1
position: 1027459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037362:1
position: 1037362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027459-1027698:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028899-1029035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031542-1031698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032961-1033086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033914-1034084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034352-1034477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035029-1035249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035395-1035683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035808-1035915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1036215-1036334:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036512-1036616:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1037321-1037362:1:exon

LMNB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LMNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin-B2 isoform X2
translation: MSSSTPSAAPPAPSPGTPRASPSAGTPLSPTRISRLQEKEELRHLNDRLAHYIERVRALELENDRLLLRVSEKEEVVTREVTGIKALYESELSDARRVLDETARERAKLQIEIGKLRAELDELAKSYKKKDGEWSTSQGRIKELEVLFHRSEAELTATLTEKRNLEAEVADLRAQLAKSEDGHAVAKKQLEKETLMRVDLENRCQSLQEELDFRKSIFEEEVRETRKRHERQLVEVDSGRQPECESKISQTLEDLRQQHDEQVRLYKLELEQTYQAKLENAKLCSDQNDKAASAAREELKEARMRIESLSYQLSGLQKQANAAEDRIRELEELMAGEREKFRKMLDVKEREMTEMRDQMQQQLVEYQELLDVKLALDMEISAYRKLLEGEEERLKLSPSPSTRITVSRATSSSSSGISAARSSRGKRKRLEIAEELSGSGSSGFGTRSSSASSSSAFQTSQQASAKGSISIEDVDPEGKYVQLKNRSDKIWAADAGVAHSPPSVLVWKHQTSWGTGTSVRTYLVNSDGEEVAVRSLTQSSAVLQDNGEEDEEAEFGEEDLFHQQGDPRTTSRGCTVM
SIO_010081: LMNB2
subclass of: SO_0000673
so part of: LMNB2
location: join(1027459..1027698,1028899..1029035,1031542..1031698,1032961..1033086,1033914..1034084,1034352..1034477,1035029..1035249,1035395..1035683,1036215..1036334,1036512..1036616,1037321..1037362)
location: region:1027459-1037362:1
so has part: feature:1027459-1027698:1:exon
so has part: feature:1028899-1029035:1:exon
so has part: feature:1031542-1031698:1:exon
so has part: feature:1032961-1033086:1:exon
so has part: feature:1033914-1034084:1:exon
so has part: feature:1034352-1034477:1:exon
so has part: feature:1035029-1035249:1:exon
so has part: feature:1035395-1035683:1:exon
so has part: feature:1036215-1036334:1:exon
so has part: feature:1036512-1036616:1:exon
so has part: feature:1037321-1037362:1:exon

XP_032992435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1027459-1027698:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028899-1029035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031542-1031698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032961-1033086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033914-1034084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034352-1034477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035029-1035249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035395-1035683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1036215-1036334:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1036512-1036616:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037321-1037362:1:exon

ARMC6
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1051642..1064690
location: region:1051642-1064690:1
so has part: feature:1051642-1064690:1:exon
subclass of: SO_0000010

117039529
type: Gene
SIO_000068: ncbigene

position:1051642:1
position: 1051642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064690:1
position: 1064690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051642-1064690:1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: ARMC6
product: armadillo repeat containing 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033136676.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: join(1051642..1051729,1054566..1054711,1054836..1054918,1055623..1056193,1057383..1057528,1058778..1058909,1062699..1062836,1064242..1064690)
location: region:1051642-1064690:1
so has part: feature:1051642-1051729:1:exon
so has part: feature:1054566-1054711:1:exon
so has part: feature:1054836-1054918:1:exon
so has part: feature:1055623-1056193:1:exon
so has part: feature:1057383-1057528:1:exon
so has part: feature:1058778-1058909:1:exon
so has part: feature:1062699-1062836:1:exon
so has part: feature:1064242-1064690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051642-1051729:1:exon

position:1051729:1
position: 1051729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054566-1054711:1:exon

position:1054566:1
position: 1054566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054711:1
position: 1054711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1054836-1054918:1:exon

position:1054836:1
position: 1054836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054918:1
position: 1054918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1055623-1056193:1:exon

position:1055623:1
position: 1055623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056193:1
position: 1056193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1057383-1057528:1:exon

position:1057383:1
position: 1057383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057528:1
position: 1057528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1058778-1058909:1:exon

position:1058778:1
position: 1058778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058909:1
position: 1058909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1062699-1062836:1:exon

position:1062699:1
position: 1062699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062836:1
position: 1062836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1064242-1064690:1:exon

position:1064242:1
position: 1064242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6
translation: MAAKRITQETFDDVVQENINDLDMDPEEAVIEAVQQFESQGVDLSNIVKTAPNSASVDGQEPQHAVLQTLDSLQKAVADADSGAVDELLVSFAEQCRQEMAVRYLAGQKGAYSAVLAACRLASEEGCSLLKALRALSTLLDGQPDFLDAPGKELLLRVLQEQQDDGDLTLATIRCVRQASLKHEQNRQDLVKGGVLSLLVGAIVRHGDRADVVREACAGLRFMTFDDDIRVPFGNAHEHAKMIVTEHGGLRVLIEAAKAFPDDCSVLREICATLGRLSVRNEFCQEIVDLGGLNFMVALLADCIDHQDLVKQVMSAIQAIAGNDEVKDAIVNAGGTDLIVLAMTRHLGSPLVCEQSCAALCMLALRKPENCRVIMEGGGALAALQAMKMHPKEAGVQKQACMLIRNLVSHSQDFSQLILEMGAEDLIVEARAAHLTCEDVAKAALRDLGCQVELRELWTGQKGSLAR
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: join(1054591..1054711,1054836..1054918,1055623..1056193,1057383..1057528,1058778..1058909,1062699..1062836,1064242..1064454)
location: region:1054591-1064454:1
so has part: feature:1054591-1054711:1:exon
so has part: feature:1054836-1054918:1:exon
so has part: feature:1055623-1056193:1:exon
so has part: feature:1057383-1057528:1:exon
so has part: feature:1058778-1058909:1:exon
so has part: feature:1062699-1062836:1:exon
so has part: feature:1064242-1064454:1:exon

XP_032992567.1
type: Protein
SIO_000068: ncbiprotein

position:1054591:1
position: 1054591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064454:1
position: 1064454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054591-1054711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054836-1054918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055623-1056193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1057383-1057528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058778-1058909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062699-1062836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064242-1064454:1:exon

LOC117039681
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1067446..1073607)
location: region:1067446-1073607:-1
so has part: feature:1067446-1073607:-1:exon
subclass of: SO_0000010

117039681
type: Gene
SIO_000068: ncbigene

position:1067446:-1
position: 1067446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073607:-1
position: 1073607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067446-1073607:-1:exon

LOC117039681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039681
product: serine/arginine repetitive matrix protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033136860.1
SIO_010081: LOC117039681
subclass of: SO_0000673
so part of: LOC117039681
location: complement(join(1067446..1067839,1070033..1070446,1071711..1071848,1073341..1073607))
location: region:1067446-1073607:-1
so has part: feature:1073341-1073607:-1:exon
so has part: feature:1071711-1071848:-1:exon
so has part: feature:1070033-1070446:-1:exon
so has part: feature:1067446-1067839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073341-1073607:-1:exon

position:1073341:-1
position: 1073341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1071711-1071848:-1:exon

position:1071711:-1
position: 1071711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071848:-1
position: 1071848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070033-1070446:-1:exon

position:1070033:-1
position: 1070033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070446:-1
position: 1070446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1067446-1067839:-1:exon

position:1067839:-1
position: 1067839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1-like
translation: MRAGEFDFWVPPCLILGRCLFLHFPPPHPPPLVSCRCQQSAYEGQEPRDKAANKEDKTKEDPDNPPEGEGKGKEETPRPQCTDLLDFRWLQEKEEEEGSLQEQPSITTEDNISQGPPDINSPGDNKEHLEPSVEKVLPSDTTKSHQPESAATDHEAYYLADDEETLLSDSCASTGYFPCYRTYEEFPRYQPPGRPEDRESGAPRPVRKRIPPTKGPHHSPPSPLPAASVSRKCPQKRKNRGAPEKEQAAEGGPKPRLQEQRSLPPNPEAEGKQVSLETERGKRSPQQGPSAGSRTSAKETHDTPPEPRTTPSRLSLRSLVCWVRKIFRKAPSPQPPPQPSTSSGAQVGRPLARRLGRWIAQYRSRIHPQSM
SIO_010081: LOC117039681
subclass of: SO_0000673
so part of: LOC117039681
location: complement(join(1067543..1067839,1070033..1070446,1071711..1071848,1073341..1073607))
location: region:1067543-1073607:-1
so has part: feature:1073341-1073607:-1:exon
so has part: feature:1071711-1071848:-1:exon
so has part: feature:1070033-1070446:-1:exon
so has part: feature:1067543-1067839:-1:exon

XP_032992751.1
type: Protein
SIO_000068: ncbiprotein

position:1067543:-1
position: 1067543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073341-1073607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1071711-1071848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070033-1070446:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067543-1067839:-1:exon

SLC25A42
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SLC25A42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1077558..1106555
location: region:1077558-1106555:1
so has part: feature:1077558-1106555:1:exon
subclass of: SO_0000010

117039399
type: Gene
SIO_000068: ncbigene

position:1077558:1
position: 1077558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106555:1
position: 1106555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077558-1106555:1:exon

SLC25A42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SLC25A42
product: solute carrier family 25 member 42
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136496.1
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: join(1077558..1077613,1088303..1088404,1093192..1093317,1094273..1094384,1098604..1098629,1099513..1099680,1100258..1100378,1103483..1103634,1104529..1106555)
location: region:1077558-1106555:1
so has part: feature:1077558-1077613:1:exon
so has part: feature:1088303-1088404:1:exon
so has part: feature:1093192-1093317:1:exon
so has part: feature:1094273-1094384:1:exon
so has part: feature:1098604-1098629:1:exon
so has part: feature:1099513-1099680:1:exon
so has part: feature:1100258-1100378:1:exon
so has part: feature:1103483-1103634:1:exon
so has part: feature:1104529-1106555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077558-1077613:1:exon

position:1077613:1
position: 1077613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088303-1088404:1:exon

position:1088303:1
position: 1088303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088404:1
position: 1088404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1093192-1093317:1:exon

position:1093192:1
position: 1093192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093317:1
position: 1093317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1094273-1094384:1:exon

position:1094273:1
position: 1094273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094384:1
position: 1094384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1098604-1098629:1:exon

position:1098604:1
position: 1098604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098629:1
position: 1098629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1099513-1099680:1:exon

position:1099513:1
position: 1099513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099680:1
position: 1099680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100258-1100378:1:exon

position:1100258:1
position: 1100258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100378:1
position: 1100378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1103483-1103634:1:exon

position:1103483:1
position: 1103483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103634:1
position: 1103634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1104529-1106555:1:exon

position:1104529:1
position: 1104529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC25A42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SLC25A42
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitochondrial coenzyme A transporter SLC25A42
translation: MGNGRAAGGQVGFKQKDVEPQIHVPILPEAAQERRSVLNSLISGAFAGAGAKTAVAPLDRTKIIFQVSSNRFSAKEAYRLIYRTYLHEGFLGLWRGNSAXMVRVIPYAAIQFCAHEEYKQILGSYYGFQGKALTPLPRFIAGSLAGTTAAMLTYPLDLVRARMAVQPRKCEYSNIVHVFIRISREEGMKTLYRGFAPTILGVIPYAGLSFFTYETLKKFHAEHSGRTQPYPTERLVFGACAGLIGQSASYPLDVVRRRMQTAGVMGHTYGSILRTMRDIIREEGLVRGLYKGLSMNWVKGPIAVGISFTTFDLTQIVLRKWEQGVDVER
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: join(1093231..1093317,1094273..1094384,1098604..1098629,1099513..1099680,1100258..1100378,1103483..1103634,1104529..1104854)
location: region:1093231-1104854:1
so has part: feature:1093231-1093317:1:exon
so has part: feature:1094273-1094384:1:exon
so has part: feature:1098604-1098629:1:exon
so has part: feature:1099513-1099680:1:exon
so has part: feature:1100258-1100378:1:exon
so has part: feature:1103483-1103634:1:exon
so has part: feature:1104529-1104854:1:exon

XP_032992387.1
type: Protein
SIO_000068: ncbiprotein

position:1093231:1
position: 1093231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104854:1
position: 1104854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093231-1093317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094273-1094384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1098604-1098629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099513-1099680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100258-1100378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1103483-1103634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1104529-1104854:1:exon

TMEM161A
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: TMEM161A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1111834..1129598)
location: region:1111834-1129598:-1
so has part: feature:1111834-1129598:-1:exon
subclass of: SO_0000010

117039397
type: Gene
SIO_000068: ncbigene

position:1111834:-1
position: 1111834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129598:-1
position: 1129598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111834-1129598:-1:exon

TMEM161A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: TMEM161A
product: transmembrane protein 161A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033136494.1
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: complement(join(1111834..1112639,1113943..1114039,1114452..1114626,1116827..1116940,1117067..1117210,1118249..1118309,1119790..1119941,1121810..1121966,1123757..1123854,1124092..1124172,1127659..1127762,1129499..1129598))
location: region:1111834-1129598:-1
so has part: feature:1129499-1129598:-1:exon
so has part: feature:1127659-1127762:-1:exon
so has part: feature:1124092-1124172:-1:exon
so has part: feature:1123757-1123854:-1:exon
so has part: feature:1121810-1121966:-1:exon
so has part: feature:1119790-1119941:-1:exon
so has part: feature:1118249-1118309:-1:exon
so has part: feature:1117067-1117210:-1:exon
so has part: feature:1116827-1116940:-1:exon
so has part: feature:1114452-1114626:-1:exon
so has part: feature:1113943-1114039:-1:exon
so has part: feature:1111834-1112639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1129499-1129598:-1:exon

position:1129499:-1
position: 1129499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1127659-1127762:-1:exon

position:1127659:-1
position: 1127659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127762:-1
position: 1127762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1124092-1124172:-1:exon

position:1124092:-1
position: 1124092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124172:-1
position: 1124172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1123757-1123854:-1:exon

position:1123757:-1
position: 1123757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123854:-1
position: 1123854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1121810-1121966:-1:exon

position:1121810:-1
position: 1121810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121966:-1
position: 1121966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1119790-1119941:-1:exon

position:1119790:-1
position: 1119790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119941:-1
position: 1119941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1118249-1118309:-1:exon

position:1118249:-1
position: 1118249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118309:-1
position: 1118309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1117067-1117210:-1:exon

position:1117067:-1
position: 1117067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117210:-1
position: 1117210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1116827-1116940:-1:exon

position:1116827:-1
position: 1116827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116940:-1
position: 1116940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1114452-1114626:-1:exon

position:1114452:-1
position: 1114452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114626:-1
position: 1114626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1113943-1114039:-1:exon

position:1113943:-1
position: 1113943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114039:-1
position: 1114039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1111834-1112639:-1:exon

position:1112639:-1
position: 1112639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM161A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: TMEM161A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 161A
translation: MAVMGVQLVVSLLVASIMQKMAPHWSFARWILCNGSLRRFKHPSEEELLALAGKPRPKGKRERKINGITEEKPSSVPRDIDLRLDSSPITAVDALVLCYFLEYQWYVDFAAYATGIYVFTEGYYCLVDPRKEANIGILWCLLAVIFSVKIFFTVMTHYFRSKEGGERSVCLAFAFFFLLVAMLVLVVREEYLEFGLDAGLNSVHDNLEVFLKGQGWDWTVPVTKLTVKLCLVALCSFLGACLTFPGLRLAQTHLDALKMAADQPAVQLLLHASFLAPVAIVLMWVKPISRDLLLNAPMGKETVQILSNASYNSVRLWTIVALCLLRLAVVRYHLQAYLNLAERWVEQMKREAGRIAVLEIQRKITRIYCYVTVVSLQYLAPILLTLHCTFLLKTLGDYSWGLYPEPALTSPAVDVVHAPQASPSDDGGTEDIQAAVEQITGALGAFSTVFTPLFYRGLLSFFTWWVSACQVVATLFGLYFHQHLAAS
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: complement(join(1112362..1112639,1113943..1114039,1114452..1114626,1116827..1116940,1117067..1117210,1118249..1118309,1119790..1119941,1121810..1121966,1123757..1123854,1124092..1124172,1127659..1127762,1129499..1129501))
location: region:1112362-1129501:-1
so has part: feature:1129499-1129501:-1:exon
so has part: feature:1127659-1127762:-1:exon
so has part: feature:1124092-1124172:-1:exon
so has part: feature:1123757-1123854:-1:exon
so has part: feature:1121810-1121966:-1:exon
so has part: feature:1119790-1119941:-1:exon
so has part: feature:1118249-1118309:-1:exon
so has part: feature:1117067-1117210:-1:exon
so has part: feature:1116827-1116940:-1:exon
so has part: feature:1114452-1114626:-1:exon
so has part: feature:1113943-1114039:-1:exon
so has part: feature:1112362-1112639:-1:exon

XP_032992385.1
type: Protein
SIO_000068: ncbiprotein

position:1112362:-1
position: 1112362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129501:-1
position: 1129501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129499-1129501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1127659-1127762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124092-1124172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1123757-1123854:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1121810-1121966:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1119790-1119941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1118249-1118309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1117067-1117210:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1116827-1116940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1114452-1114626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1113943-1114039:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1112362-1112639:-1:exon

LOC117039400
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1140019..1177626)
location: region:1140019-1177626:-1
so has part: feature:1140019-1177626:-1:exon
subclass of: SO_0000011

117039400
type: Gene
SIO_000068: ncbigene

position:1140019:-1
position: 1140019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177626:-1
position: 1177626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140019-1177626:-1:exon

LOC117039400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 80427
nc RNA class: lncRNA
gene: LOC117039400
product: uncharacterized LOC117039400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004425776.1
SIO_010081: LOC117039400
subclass of: SO_0000673
so part of: LOC117039400
location: complement(join(1140019..1140121,1177569..1177626))
location: region:1140019-1177626:-1
so has part: feature:1177569-1177626:-1:exon
so has part: feature:1140019-1140121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177569-1177626:-1:exon

position:1177569:-1
position: 1177569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140019-1140121:-1:exon

position:1140121:-1
position: 1140121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039398
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1199791..1217445)
location: region:1199791-1217445:-1
so has part: feature:1199791-1217445:-1:exon
subclass of: SO_0000010

117039398
type: Gene
SIO_000068: ncbigene

position:1199791:-1
position: 1199791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217445:-1
position: 1217445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199791-1217445:-1:exon

LOC117039398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039398
product: 60S ribosomal protein L39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033136495.1
SIO_010081: LOC117039398
subclass of: SO_0000673
so part of: LOC117039398
location: complement(join(1199791..1199842,1202258..1202361,1203079..1203082,1217438..1217445))
location: region:1199791-1217445:-1
so has part: feature:1217438-1217445:-1:exon
so has part: feature:1203079-1203082:-1:exon
so has part: feature:1202258-1202361:-1:exon
so has part: feature:1199791-1199842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217438-1217445:-1:exon

position:1217438:-1
position: 1217438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1203079-1203082:-1:exon

position:1203079:-1
position: 1203079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203082:-1
position: 1203082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1202258-1202361:-1:exon

position:1202258:-1
position: 1202258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202361:-1
position: 1202361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1199791-1199842:-1:exon

position:1199842:-1
position: 1199842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L39
translation: MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL
SIO_010081: LOC117039398
subclass of: SO_0000673
so part of: LOC117039398
location: complement(join(1199794..1199842,1202258..1202361,1203079..1203081))
location: region:1199794-1203081:-1
so has part: feature:1203079-1203081:-1:exon
so has part: feature:1202258-1202361:-1:exon
so has part: feature:1199794-1199842:-1:exon

XP_032992386.1
type: Protein
SIO_000068: ncbiprotein

position:1199794:-1
position: 1199794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203081:-1
position: 1203081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203079-1203081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202258-1202361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199794-1199842:-1:exon

LOC117039772
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039772
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1200878..1201009)
location: region:1200878-1201009:-1
so has part: feature:1200878-1201009:-1:exon
subclass of: SO_0000578

117039772
type: Gene
SIO_000068: ncbigene

position:1200878:-1
position: 1200878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201009:-1
position: 1201009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200878-1201009:-1:exon

LOC117039772
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 80427
nc RNA class: snoRNA
gene: LOC117039772
product: small nucleolar RNA SNORA69
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00265
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004425791.1
SIO_010081: LOC117039772
subclass of: SO_0000673
so part of: LOC117039772
location: complement(1200878..1201009)
location: region:1200878-1201009:-1
so has part: feature:1200878-1201009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1200878-1201009:-1:exon

MEF2B
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: MEF2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1221619..1253240)
location: region:1221619-1253240:-1
so has part: feature:1221619-1253240:-1:exon
subclass of: SO_0000010

117039682
type: Gene
SIO_000068: ncbigene

position:1221619:-1
position: 1221619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253240:-1
position: 1253240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221619-1253240:-1:exon

MEF2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: MEF2B
product: myocyte enhancer factor 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136862.1
SIO_010081: MEF2B
subclass of: SO_0000673
so part of: MEF2B
location: complement(join(1221619..1222302,1224221..1224329,1226396..1226507,1227559..1227698,1228855..1229022,1229137..1229176,1231177..1231380,1231650..1231728,1253065..1253240))
location: region:1221619-1253240:-1
so has part: feature:1253065-1253240:-1:exon
so has part: feature:1231650-1231728:-1:exon
so has part: feature:1231177-1231380:-1:exon
so has part: feature:1229137-1229176:-1:exon
so has part: feature:1228855-1229022:-1:exon
so has part: feature:1227559-1227698:-1:exon
so has part: feature:1226396-1226507:-1:exon
so has part: feature:1224221-1224329:-1:exon
so has part: feature:1221619-1222302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253065-1253240:-1:exon

position:1253065:-1
position: 1253065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231650-1231728:-1:exon

position:1231650:-1
position: 1231650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231728:-1
position: 1231728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1231177-1231380:-1:exon

position:1231177:-1
position: 1231177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231380:-1
position: 1231380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1229137-1229176:-1:exon

position:1229137:-1
position: 1229137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229176:-1
position: 1229176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1228855-1229022:-1:exon

position:1228855:-1
position: 1228855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229022:-1
position: 1229022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1227559-1227698:-1:exon

position:1227559:-1
position: 1227559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227698:-1
position: 1227698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1226396-1226507:-1:exon

position:1226396:-1
position: 1226396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226507:-1
position: 1226507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1224221-1224329:-1:exon

position:1224221:-1
position: 1224221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224329:-1
position: 1224329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1221619-1222302:-1:exon

position:1222302:-1
position: 1222302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEF2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: MEF2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2B
translation: MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFSTPAQTWDKVLLKYTEYSEPHESRTTADILESADSLGFQSWLVAVCTFPLHPGRGVDEDSPSGSEGGAGGPRESPLQQSHLPALPKHATPPVRSPTPLGTGMGYPLFSHGNLGRALSSKPPAPLYLGTDPRRGEGPLSAGRSHVVSARSLYPGLQSTSPTLSAGSSCLPGHGLPGYYSLSSRDPEFAPGDGPSSHAFGLQASAVSTWPHREMSAASHPALGAMGRIGDQPALVSGSPPLRTPISVKSERASPTAPCASTAPQASQSARPSLADVPVDLHSRDDYIKAYHYSLLLSRPLADEQRHPSVPTRRPQPTMDEWQR
SIO_010081: MEF2B
subclass of: SO_0000673
so part of: MEF2B
location: complement(join(1221999..1222302,1224221..1224329,1226396..1226507,1227559..1227698,1228855..1229022,1229137..1229176,1231177..1231380,1231650..1231703))
location: region:1221999-1231703:-1
so has part: feature:1231650-1231703:-1:exon
so has part: feature:1231177-1231380:-1:exon
so has part: feature:1229137-1229176:-1:exon
so has part: feature:1228855-1229022:-1:exon
so has part: feature:1227559-1227698:-1:exon
so has part: feature:1226396-1226507:-1:exon
so has part: feature:1224221-1224329:-1:exon
so has part: feature:1221999-1222302:-1:exon

XP_032992753.1
type: Protein
SIO_000068: ncbiprotein

position:1221999:-1
position: 1221999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231703:-1
position: 1231703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231650-1231703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231177-1231380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229137-1229176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1228855-1229022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1227559-1227698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226396-1226507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1224221-1224329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221999-1222302:-1:exon

TMEM221
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: TMEM221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1263298..1269925
location: region:1263298-1269925:1
so has part: feature:1263298-1269925:1:exon
subclass of: SO_0000010

117039480
type: Gene
SIO_000068: ncbigene

position:1263298:1
position: 1263298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269925:1
position: 1269925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263298-1269925:1:exon

TMEM221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: TMEM221
product: transmembrane protein 221
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033136596.1
SIO_010081: TMEM221
subclass of: SO_0000673
so part of: TMEM221
location: join(1263298..1263687,1267727..1267812,1269326..1269925)
location: region:1263298-1269925:1
so has part: feature:1263298-1263687:1:exon
so has part: feature:1267727-1267812:1:exon
so has part: feature:1269326-1269925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1263298-1263687:1:exon

position:1263687:1
position: 1263687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1267727-1267812:1:exon

position:1267727:1
position: 1267727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267812:1
position: 1267812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1269326-1269925:1:exon

position:1269326:1
position: 1269326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: TMEM221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 221
translation: MPAPPPSPYGPRALGALVLFGTVSGLMAVLASMLIFQIQAGSRAGAAGAGGLPEGARRVLLPLSVVLASLCLVLSLSCLLLSLLHGYCGAERCAPTGGALGPDRGDWFLVDSRKVRHVAVGLFCCGVSAYLAALSMYMLVQFETETGVTSACVLSSGILVLFITVTHALIRAAKATGLSQGELSHTLYENDSARSGELPAAPLNNTKGMPAPRPRPEIHREFSYPPFLEQKSHLTTPASSNITSSGSAELTLEKDCYSAPRMHRTLSVESGLLQTHGKPWIGVTQEMRNVLSRKTAGTGKDSTLV
SIO_010081: TMEM221
subclass of: SO_0000673
so part of: TMEM221
location: join(1263377..1263687,1267727..1267812,1269326..1269846)
location: region:1263377-1269846:1
so has part: feature:1263377-1263687:1:exon
so has part: feature:1267727-1267812:1:exon
so has part: feature:1269326-1269846:1:exon

XP_032992487.1
type: Protein
SIO_000068: ncbiprotein

position:1263377:1
position: 1263377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269846:1
position: 1269846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263377-1263687:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1267727-1267812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269326-1269846:1:exon

BORCS8
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: BORCS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1271957..1278427)
location: region:1271957-1278427:-1
so has part: feature:1271957-1278427:-1:exon
subclass of: SO_0000010

117039568
type: Gene
SIO_000068: ncbigene

position:1271957:-1
position: 1271957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278427:-1
position: 1278427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271957-1278427:-1:exon

BORCS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: BORCS8
product: BLOC-1 related complex subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_033136725.1
SIO_010081: BORCS8
subclass of: SO_0000673
so part of: BORCS8
location: complement(join(1271957..1272230,1273055..1273119,1277094..1277206,1278308..1278427))
location: region:1271957-1278427:-1
so has part: feature:1278308-1278427:-1:exon
so has part: feature:1277094-1277206:-1:exon
so has part: feature:1273055-1273119:-1:exon
so has part: feature:1271957-1272230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278308-1278427:-1:exon

position:1278308:-1
position: 1278308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1277094-1277206:-1:exon

position:1277094:-1
position: 1277094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277206:-1
position: 1277206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1273055-1273119:-1:exon

position:1273055:-1
position: 1273055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273119:-1
position: 1273119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271957-1272230:-1:exon

position:1272230:-1
position: 1272230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BORCS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: BORCS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BLOC-1-related complex subunit 8
translation: MEEPEMQLKVKKVTDKFTESMYVLANEPSVALYRLQEHVRRSLPELAQHKADMQSWEEQSQGAIYTVEYACSAIKNMKDSSVYFKSIEGLLRHTIAVKDRLNAARR
SIO_010081: BORCS8
subclass of: SO_0000673
so part of: BORCS8
location: complement(join(1272125..1272230,1273055..1273119,1277094..1277206,1278308..1278344))
location: region:1272125-1278344:-1
so has part: feature:1278308-1278344:-1:exon
so has part: feature:1277094-1277206:-1:exon
so has part: feature:1273055-1273119:-1:exon
so has part: feature:1272125-1272230:-1:exon

XP_032992616.1
type: Protein
SIO_000068: ncbiprotein

position:1272125:-1
position: 1272125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278344:-1
position: 1278344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278308-1278344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277094-1277206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1273055-1273119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1272125-1272230:-1:exon

RFXANK
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1278403..1290016
location: region:1278403-1290016:1
so has part: feature:1278403-1290016:1:exon
subclass of: SO_0000010

117039567
type: Gene
SIO_000068: ncbigene

position:1278403:1
position: 1278403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290016:1
position: 1290016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278403-1290016:1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033136724.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: join(1278403..1278475,1281409..1281619,1282002..1282085,1282888..1282953,1284481..1284581,1284675..1284800,1286529..1286595,1288406..1288486,1289416..1290016)
location: region:1278403-1290016:1
so has part: feature:1278403-1278475:1:exon
so has part: feature:1281409-1281619:1:exon
so has part: feature:1282002-1282085:1:exon
so has part: feature:1282888-1282953:1:exon
so has part: feature:1284481-1284581:1:exon
so has part: feature:1284675-1284800:1:exon
so has part: feature:1286529-1286595:1:exon
so has part: feature:1288406-1288486:1:exon
so has part: feature:1289416-1290016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278403-1278475:1:exon

position:1278475:1
position: 1278475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281409-1281619:1:exon

position:1281409:1
position: 1281409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281619:1
position: 1281619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282002-1282085:1:exon

position:1282002:1
position: 1282002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282085:1
position: 1282085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1282888-1282953:1:exon

position:1282888:1
position: 1282888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282953:1
position: 1282953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1284481-1284581:1:exon

position:1284481:1
position: 1284481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284581:1
position: 1284581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1284675-1284800:1:exon

position:1284675:1
position: 1284675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284800:1
position: 1284800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1286529-1286595:1:exon

position:1286529:1
position: 1286529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286595:1
position: 1286595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1288406-1288486:1:exon

position:1288406:1
position: 1288406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288486:1
position: 1288486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1289416-1290016:1:exon

position:1289416:1
position: 1289416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033136722.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: join(1280496..1280773,1281464..1281619,1282002..1282085,1282888..1282953,1284481..1284581,1284675..1284800,1286529..1286595,1288406..1288486,1289416..1290016)
location: region:1280496-1290016:1
so has part: feature:1280496-1280773:1:exon
so has part: feature:1281464-1281619:1:exon
so has part: feature:1282002-1282085:1:exon
so has part: feature:1282888-1282953:1:exon
so has part: feature:1284481-1284581:1:exon
so has part: feature:1284675-1284800:1:exon
so has part: feature:1286529-1286595:1:exon
so has part: feature:1288406-1288486:1:exon
so has part: feature:1289416-1290016:1:exon

position:1280496:1
position: 1280496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280496-1280773:1:exon

position:1280773:1
position: 1280773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281464-1281619:1:exon

position:1281464:1
position: 1281464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282002-1282085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282888-1282953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284481-1284581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1284675-1284800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1286529-1286595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1288406-1288486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289416-1290016:1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033136723.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: join(1280498..1280773,1281409..1281619,1282002..1282085,1282888..1282953,1284481..1284581,1284675..1284800,1286529..1286595,1288406..1288486,1289416..1290016)
location: region:1280498-1290016:1
so has part: feature:1280498-1280773:1:exon
so has part: feature:1281409-1281619:1:exon
so has part: feature:1282002-1282085:1:exon
so has part: feature:1282888-1282953:1:exon
so has part: feature:1284481-1284581:1:exon
so has part: feature:1284675-1284800:1:exon
so has part: feature:1286529-1286595:1:exon
so has part: feature:1288406-1288486:1:exon
so has part: feature:1289416-1290016:1:exon

position:1280498:1
position: 1280498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280498-1280773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281409-1281619:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282002-1282085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282888-1282953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284481-1284581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1284675-1284800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1286529-1286595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1288406-1288486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289416-1290016:1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X1
translation: MRKLDVIALLMGEAEAPVAKMTHSAPSKDPEVLASDQEDDQASIILQLYPYSEEKDDPNQAVPALNDGSSLKLATTLTNRQRGNEASALPATLDTLSIHQLAAQGELVLLKENLRKGENLLNKPDERGFTPLMWAAAFGEIETIRSMLEWGADPHVLAKERESALSLASMGGYTDIVTLLLEKDVDINTYDWNGGTPLLYAVRGNHVKCIEALLAHGADLTTEADSGYTPMDLAVALGHRKVQHVIEKHILKLLRSKEPE
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: join(1280731..1280773,1281464..1281619,1282002..1282085,1282888..1282953,1284481..1284581,1284675..1284800,1286529..1286595,1288406..1288486,1289416..1289474)
location: region:1280731-1289474:1
so has part: feature:1280731-1280773:1:exon
so has part: feature:1281464-1281619:1:exon
so has part: feature:1282002-1282085:1:exon
so has part: feature:1282888-1282953:1:exon
so has part: feature:1284481-1284581:1:exon
so has part: feature:1284675-1284800:1:exon
so has part: feature:1286529-1286595:1:exon
so has part: feature:1288406-1288486:1:exon
so has part: feature:1289416-1289474:1:exon

XP_032992613.1
type: Protein
SIO_000068: ncbiprotein

position:1280731:1
position: 1280731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289474:1
position: 1289474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280731-1280773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281464-1281619:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282002-1282085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282888-1282953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284481-1284581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1284675-1284800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1286529-1286595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1288406-1288486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289416-1289474:1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X2
translation: MTHSAPSKDPEVLASDQEDDQASIILQLYPYSEEKDDPNQAVPALNDGSSLKLATTLTNRQRGNEASALPATLDTLSIHQLAAQGELVLLKENLRKGENLLNKPDERGFTPLMWAAAFGEIETIRSMLEWGADPHVLAKERESALSLASMGGYTDIVTLLLEKDVDINTYDWNGGTPLLYAVRGNHVKCIEALLAHGADLTTEADSGYTPMDLAVALGHRKVQHVIEKHILKLLRSKEPE
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: join(1281481..1281619,1282002..1282085,1282888..1282953,1284481..1284581,1284675..1284800,1286529..1286595,1288406..1288486,1289416..1289474)
location: region:1281481-1289474:1
so has part: feature:1281481-1281619:1:exon
so has part: feature:1282002-1282085:1:exon
so has part: feature:1282888-1282953:1:exon
so has part: feature:1284481-1284581:1:exon
so has part: feature:1284675-1284800:1:exon
so has part: feature:1286529-1286595:1:exon
so has part: feature:1288406-1288486:1:exon
so has part: feature:1289416-1289474:1:exon

XP_032992614.1
type: Protein
SIO_000068: ncbiprotein

position:1281481:1
position: 1281481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281481-1281619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282002-1282085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282888-1282953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284481-1284581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284675-1284800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286529-1286595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288406-1288486:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289416-1289474:1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X2
translation: MTHSAPSKDPEVLASDQEDDQASIILQLYPYSEEKDDPNQAVPALNDGSSLKLATTLTNRQRGNEASALPATLDTLSIHQLAAQGELVLLKENLRKGENLLNKPDERGFTPLMWAAAFGEIETIRSMLEWGADPHVLAKERESALSLASMGGYTDIVTLLLEKDVDINTYDWNGGTPLLYAVRGNHVKCIEALLAHGADLTTEADSGYTPMDLAVALGHRKVQHVIEKHILKLLRSKEPE
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: join(1281481..1281619,1282002..1282085,1282888..1282953,1284481..1284581,1284675..1284800,1286529..1286595,1288406..1288486,1289416..1289474)
location: region:1281481-1289474:1
so has part: feature:1281481-1281619:1:exon
so has part: feature:1282002-1282085:1:exon
so has part: feature:1282888-1282953:1:exon
so has part: feature:1284481-1284581:1:exon
so has part: feature:1284675-1284800:1:exon
so has part: feature:1286529-1286595:1:exon
so has part: feature:1288406-1288486:1:exon
so has part: feature:1289416-1289474:1:exon

XP_032992615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1281481-1281619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282002-1282085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282888-1282953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284481-1284581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284675-1284800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286529-1286595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288406-1288486:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289416-1289474:1:exon

NR2C2AP
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: NR2C2AP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1291613..1295879)
location: region:1291613-1295879:-1
so has part: feature:1291613-1295879:-1:exon
subclass of: SO_0000010

117039482
type: Gene
SIO_000068: ncbigene

position:1291613:-1
position: 1291613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295879:-1
position: 1295879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291613-1295879:-1:exon

NR2C2AP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: NR2C2AP
product: nuclear receptor 2C2 associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033136600.1
SIO_010081: NR2C2AP
subclass of: SO_0000673
so part of: NR2C2AP
location: complement(join(1291613..1291885,1291981..1292048,1292468..1292573,1294498..1294588,1295737..1295879))
location: region:1291613-1295879:-1
so has part: feature:1295737-1295879:-1:exon
so has part: feature:1294498-1294588:-1:exon
so has part: feature:1292468-1292573:-1:exon
so has part: feature:1291981-1292048:-1:exon
so has part: feature:1291613-1291885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295737-1295879:-1:exon

position:1295737:-1
position: 1295737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1294498-1294588:-1:exon

position:1294498:-1
position: 1294498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294588:-1
position: 1294588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1292468-1292573:-1:exon

position:1292468:-1
position: 1292468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292573:-1
position: 1292573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1291981-1292048:-1:exon

position:1291981:-1
position: 1291981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292048:-1
position: 1292048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1291613-1291885:-1:exon

position:1291885:-1
position: 1291885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR2C2AP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: NR2C2AP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor 2C2-associated protein
translation: MMAATSLICSGTVSRVSSVLNRDVKQFGKKFMFDGNEETCWNSDQGATQWLMLEFPQAVRASQIQIQFQGGFASQKCVVQGCQNGGNLSPVAEFYPEDSNSLQRFSLEETPLDKLKITFENSTDFFGRVIVYQLDVRGVKL
SIO_010081: NR2C2AP
subclass of: SO_0000673
so part of: NR2C2AP
location: complement(join(1291769..1291885,1291981..1292048,1292468..1292573,1294498..1294588,1295737..1295780))
location: region:1291769-1295780:-1
so has part: feature:1295737-1295780:-1:exon
so has part: feature:1294498-1294588:-1:exon
so has part: feature:1292468-1292573:-1:exon
so has part: feature:1291981-1292048:-1:exon
so has part: feature:1291769-1291885:-1:exon

XP_032992491.1
type: Protein
SIO_000068: ncbiprotein

position:1291769:-1
position: 1291769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295780:-1
position: 1295780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295737-1295780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1294498-1294588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1292468-1292573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291981-1292048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1291769-1291885:-1:exon

NCAN
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: NCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1334118..1387832
location: region:1334118-1387832:1
so has part: feature:1334118-1387832:1:exon
subclass of: SO_0000010

117039683
type: Gene
SIO_000068: ncbigene

position:1334118:1
position: 1334118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387832:1
position: 1387832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1334118-1387832:1:exon

NCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: NCAN
product: neurocan
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136863.1
SIO_010081: NCAN
subclass of: SO_0000673
so part of: NCAN
location: join(1334118..1334136,1351675..1351754,1357857..1358258,1359573..1359747,1361537..1361664,1364636..1364929,1367677..1368708,1373258..1374553,1378326..1378442,1380691..1380804,1382124..1382282,1383405..1383487,1384183..1384327,1386413..1386595,1387642..1387832)
location: region:1334118-1387832:1
so has part: feature:1334118-1334136:1:exon
so has part: feature:1351675-1351754:1:exon
so has part: feature:1357857-1358258:1:exon
so has part: feature:1359573-1359747:1:exon
so has part: feature:1361537-1361664:1:exon
so has part: feature:1364636-1364929:1:exon
so has part: feature:1367677-1368708:1:exon
so has part: feature:1373258-1374553:1:exon
so has part: feature:1378326-1378442:1:exon
so has part: feature:1380691-1380804:1:exon
so has part: feature:1382124-1382282:1:exon
so has part: feature:1383405-1383487:1:exon
so has part: feature:1384183-1384327:1:exon
so has part: feature:1386413-1386595:1:exon
so has part: feature:1387642-1387832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1334118-1334136:1:exon

position:1334136:1
position: 1334136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1351675-1351754:1:exon

position:1351675:1
position: 1351675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351754:1
position: 1351754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1357857-1358258:1:exon

position:1357857:1
position: 1357857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358258:1
position: 1358258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1359573-1359747:1:exon

position:1359573:1
position: 1359573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359747:1
position: 1359747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1361537-1361664:1:exon

position:1361537:1
position: 1361537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361664:1
position: 1361664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1364636-1364929:1:exon

position:1364636:1
position: 1364636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364929:1
position: 1364929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1367677-1368708:1:exon

position:1367677:1
position: 1367677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368708:1
position: 1368708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1373258-1374553:1:exon

position:1373258:1
position: 1373258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374553:1
position: 1374553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1378326-1378442:1:exon

position:1378326:1
position: 1378326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378442:1
position: 1378442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1380691-1380804:1:exon

position:1380691:1
position: 1380691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380804:1
position: 1380804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1382124-1382282:1:exon

position:1382124:1
position: 1382124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382282:1
position: 1382282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1383405-1383487:1:exon

position:1383405:1
position: 1383405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383487:1
position: 1383487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1384183-1384327:1:exon

position:1384183:1
position: 1384183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384327:1
position: 1384327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1386413-1386595:1:exon

position:1386413:1
position: 1386413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386595:1
position: 1386595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1387642-1387832:1:exon

position:1387642:1
position: 1387642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: NCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurocan core protein
translation: MVHLMDGAGSWVLLGYLLLPFSVVGSQDNAKVIHINKVHHQPLRVGLAEPIALPCLFLLQLPTSLGPNAPPDPPRIKWSKVQSASGQPEDVPILVAKDDVVKVSKGYEGRVSLPGYPSRRHNATLLLSAARASDAGLYRCEVVAGIHDEQDLVPLEVTGVVFHYRAASNRYALTFPEAQKACEENSAVIASPDHLQVAFEDGYDNCDAGWLSDRTVRYPITLSRPGCYGDRNTLPGVRSYGERDAAEAYDVYCYSKELRGKVFYASSPGRLTFQTAQKHCLSRGARLATAGQLYLAWREGLDQCDPGWLADGSVRYPIQIPRKKCGGDEPGVRTVYQFPNRTGFPEPASKFDAYCYKAWQPPTKPDPAALGVDHGQVAREPMDQDSEGSQDPGIENVLVEHDSHLPLLNELFPKENDDAVMSGDSKELSKDPYGPSQKAAIPFLEEDEQLQLVTAFPAGSVDPWEERAAPAPKATPLDLEGRASTRPFTVSIPGGANGGHLLDTADQTPVGEMKEHGNGEMSVGKESADAGPTITKSPPPEESDDGLPAEEVARPTSPTWLHGTAEGSTSLSPQPPFRTHIPKGRPTSALPPVPHGGRLFGTEAPPAPAGLPESTRKSIYSGLNGRYFQRRREEGGDGGGSQPSIDRGGSTAVPTTLSVLALAVRTMADNSIEATAREAPSPASVLRGEVVYAFSNEVEGNGLAPPEHRGHPEMTFSPASDFLEDPSAEKTTQGHEEASVPGSQERPTHREHPDASLPATPNGPLHRLEAVATTTDNAVEGSLMGTSIRGDYPQGITQPGENEEVFSGSGNVTPTTPLKNESQADEASGESDYDFRESHAKAVSFAEELPGLGEAWQHLPGVVPERSEKQEGTAGEDPTLQETTQHSEVALAELRGEEAVTLSAEDIPSPMAASDYPLAARLISGEADAWVAVGGEEATTMEVKGRASSGLVDGPAVTEVLNPSEAEDRWEVITPSMSGHFDDGVAGRSTREETTVPEAVSLAGSSSGPQQGKGTTGTPSHSTTRDLIPPGFLPKGSEDGEDLTSRGTPESPSPPWSTSEPARHNFNTSELPIYPSDGVITGKESESFLPTAPGQILPMESDGGSGEEKGGDVSAAKEVEGLVWIGEANATALAETDPCDNDPCLHGGTCQSSGNLSTCSCPRGFTGENCEIDIDDCLSSPCQNGGTCIDEINSFVCLCLPSYGGSLCDRDTEGCDHNWNKFQGHCYRYFAHRRSWEDAERDCRHRSGHLTSIHSWEEHNFINSFGQENTWIGLNDRIVEQDFQWTDNTGLQYENWRQNQPDNFFAGGEDCVVLVSHETGKWNDVPCNYNLPYVCKKDTVLCGPPPTVENAFPIGKKREKYSVHATVRYQCEEGFLQRHVPTIKCHVNGTWDRPRIICTKHGPIESAATIAATTNTTSTNPARTAGNTRSSTQSWTGRRKTGTTFNDGPGKESTSSQFRSPPP
SIO_010081: NCAN
subclass of: SO_0000673
so part of: NCAN
location: join(1351682..1351754,1357857..1358258,1359573..1359747,1361537..1361664,1364636..1364929,1367677..1368708,1373258..1374553,1378326..1378442,1380691..1380804,1382124..1382282,1383405..1383487,1384183..1384327,1386413..1386595,1387642..1387832)
location: region:1351682-1387832:1
so has part: feature:1351682-1351754:1:exon
so has part: feature:1357857-1358258:1:exon
so has part: feature:1359573-1359747:1:exon
so has part: feature:1361537-1361664:1:exon
so has part: feature:1364636-1364929:1:exon
so has part: feature:1367677-1368708:1:exon
so has part: feature:1373258-1374553:1:exon
so has part: feature:1378326-1378442:1:exon
so has part: feature:1380691-1380804:1:exon
so has part: feature:1382124-1382282:1:exon
so has part: feature:1383405-1383487:1:exon
so has part: feature:1384183-1384327:1:exon
so has part: feature:1386413-1386595:1:exon
so has part: feature:1387642-1387832:1:exon

XP_032992754.1
type: Protein
SIO_000068: ncbiprotein

position:1351682:1
position: 1351682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351682-1351754:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1357857-1358258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1359573-1359747:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361537-1361664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1364636-1364929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367677-1368708:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373258-1374553:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1378326-1378442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380691-1380804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1382124-1382282:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1383405-1383487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384183-1384327:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1386413-1386595:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1387642-1387832:1:exon

HAPLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: HAPLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1392748..1401986)
location: region:1392748-1401986:-1
so has part: feature:1392748-1401986:-1:exon
subclass of: SO_0000010

117039684
type: Gene
SIO_000068: ncbigene

position:1392748:-1
position: 1392748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401986:-1
position: 1401986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392748-1401986:-1:exon

HAPLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: HAPLN4
product: hyaluronan and proteoglycan link protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033136864.1
SIO_010081: HAPLN4
subclass of: SO_0000673
so part of: HAPLN4
location: complement(join(1392748..1393097,1395772..1396074,1400355..1400717,1401875..1401986))
location: region:1392748-1401986:-1
so has part: feature:1401875-1401986:-1:exon
so has part: feature:1400355-1400717:-1:exon
so has part: feature:1395772-1396074:-1:exon
so has part: feature:1392748-1393097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1401875-1401986:-1:exon

position:1401875:-1
position: 1401875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1400355-1400717:-1:exon

position:1400355:-1
position: 1400355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400717:-1
position: 1400717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1395772-1396074:-1:exon

position:1395772:-1
position: 1395772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396074:-1
position: 1396074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1392748-1393097:-1:exon

position:1393097:-1
position: 1393097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAPLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: HAPLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 4
translation: MLPSRAVTVTCLHLAVFILCFQLAAPQKGRKKVVHVSEDDSGAVVVQTAPGKVVTHRGGTIILPCRFHYDVSAHDPDEIRLKWTKLVEPMAFEDVFVAMGVERRAFGSYRGRTALQEDGSGDASLIIRNVTLQDYGRYECEVTNELEDDAGMVNLDLEGVIFPYHPRLGRYSLNFHDAQQACLEQDGILASYDQLHEAWLEGMDWCNAGWLQDGSVQYPISKPRDECGRKETPVGVRNYGYRHKDDERYDAFCFTSNLDGKVYFLKTYRKLSFPEAVQACKKNGGSVAKVGQLYAAWKIQLLDKCEAGWVGDGSIRYPIVNPRTRCGGREPGVRNLGFPDKKYKLFGVYCYRSATSGGSKKAAKEGAGKRKPLQV
SIO_010081: HAPLN4
subclass of: SO_0000673
so part of: HAPLN4
location: complement(join(1392748..1393097,1395772..1396074,1400355..1400717,1401875..1401986))
location: region:1392748-1401986:-1
so has part: feature:1401875-1401986:-1:exon
so has part: feature:1400355-1400717:-1:exon
so has part: feature:1395772-1396074:-1:exon
so has part: feature:1392748-1393097:-1:exon

XP_032992755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1401875-1401986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1400355-1400717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1395772-1396074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1392748-1393097:-1:exon

TM6SF2
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: TM6SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1407566..1426433)
location: region:1407566-1426433:-1
so has part: feature:1407566-1426433:-1:exon
subclass of: SO_0000010

117039409
type: Gene
SIO_000068: ncbigene

position:1407566:-1
position: 1407566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426433:-1
position: 1426433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407566-1426433:-1:exon

TM6SF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: TM6SF2
product: transmembrane 6 superfamily member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136509.1
SIO_010081: TM6SF2
subclass of: SO_0000673
so part of: TM6SF2
location: complement(join(1407566..1407841,1408797..1408916,1410557..1410649,1412563..1412664,1414032..1414156,1415363..1415445,1415821..1415924,1419591..1419688,1419904..1419998,1426064..1426433))
location: region:1407566-1426433:-1
so has part: feature:1426064-1426433:-1:exon
so has part: feature:1419904-1419998:-1:exon
so has part: feature:1419591-1419688:-1:exon
so has part: feature:1415821-1415924:-1:exon
so has part: feature:1415363-1415445:-1:exon
so has part: feature:1414032-1414156:-1:exon
so has part: feature:1412563-1412664:-1:exon
so has part: feature:1410557-1410649:-1:exon
so has part: feature:1408797-1408916:-1:exon
so has part: feature:1407566-1407841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1426064-1426433:-1:exon

position:1426064:-1
position: 1426064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419904-1419998:-1:exon

position:1419904:-1
position: 1419904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419998:-1
position: 1419998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1419591-1419688:-1:exon

position:1419591:-1
position: 1419591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419688:-1
position: 1419688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415821-1415924:-1:exon

position:1415821:-1
position: 1415821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415924:-1
position: 1415924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1415363-1415445:-1:exon

position:1415363:-1
position: 1415363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415445:-1
position: 1415445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1414032-1414156:-1:exon

position:1414032:-1
position: 1414032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414156:-1
position: 1414156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1412563-1412664:-1:exon

position:1412563:-1
position: 1412563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412664:-1
position: 1412664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1410557-1410649:-1:exon

position:1410557:-1
position: 1410557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410649:-1
position: 1410649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1408797-1408916:-1:exon

position:1408797:-1
position: 1408797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408916:-1
position: 1408916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1407566-1407841:-1:exon

position:1407841:-1
position: 1407841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TM6SF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: TM6SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 6 superfamily member 2
translation: MTLHSRSAEPRGPSFLTMKPHPLFLTVTLFLFAFPFYMMNGLAVLDNPSAIAVTAFGILLFLFALVYFASYSEDALYYVFVALSFVSGMSAVVVLEEDGYISNFLEVYMRQGEPYLSTAHGLMNCYWAATTHFALQLAMIAAITQRKSYRNLGFYWVGSLTMNFVVYLLGNVVGKYGSEIRPDFFLNIPLLLTLIWAACRIFAQPKTLPLETADKVLEEQCKSLFQRPLDLVLMGFLLFDISFTLFRGLVVLDCKADICFDYINQQEPYLRDPVAYPKIQMLVFLFYGLPYFCFCLYGLLTPGSSWMPDWALISAGAIAQAQFSHIGSSLHQHTPFPYRTPDSAWWLVTLFNLAYAVGPHLLVYRCLRNPAFFSPVVSQDDIKKNQ
SIO_010081: TM6SF2
subclass of: SO_0000673
so part of: TM6SF2
location: complement(join(1407641..1407841,1408797..1408916,1410557..1410649,1412563..1412664,1414032..1414156,1415363..1415445,1415821..1415924,1419591..1419688,1419904..1419998,1426064..1426203))
location: region:1407641-1426203:-1
so has part: feature:1426064-1426203:-1:exon
so has part: feature:1419904-1419998:-1:exon
so has part: feature:1419591-1419688:-1:exon
so has part: feature:1415821-1415924:-1:exon
so has part: feature:1415363-1415445:-1:exon
so has part: feature:1414032-1414156:-1:exon
so has part: feature:1412563-1412664:-1:exon
so has part: feature:1410557-1410649:-1:exon
so has part: feature:1408797-1408916:-1:exon
so has part: feature:1407641-1407841:-1:exon

XP_032992400.1
type: Protein
SIO_000068: ncbiprotein

position:1407641:-1
position: 1407641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426203:-1
position: 1426203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426064-1426203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1419904-1419998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419591-1419688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415821-1415924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415363-1415445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414032-1414156:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412563-1412664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410557-1410649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1408797-1408916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1407641-1407841:-1:exon

SUGP1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1429653..1446031)
location: region:1429653-1446031:-1
so has part: feature:1429653-1446031:-1:exon
subclass of: SO_0000010

117039408
type: Gene
SIO_000068: ncbigene

position:1429653:-1
position: 1429653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446031:-1
position: 1446031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429653-1446031:-1:exon

SUGP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: SUGP1
product: SURP and G-patch domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033136508.1
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: complement(join(1429653..1429903,1430751..1430880,1431560..1431705,1432251..1432357,1433096..1433273,1433416..1433522,1435002..1435387,1437437..1437560,1439739..1439842,1440048..1440171,1440997..1441230,1442648..1442751,1443491..1443662,1445920..1446031))
location: region:1429653-1446031:-1
so has part: feature:1445920-1446031:-1:exon
so has part: feature:1443491-1443662:-1:exon
so has part: feature:1442648-1442751:-1:exon
so has part: feature:1440997-1441230:-1:exon
so has part: feature:1440048-1440171:-1:exon
so has part: feature:1439739-1439842:-1:exon
so has part: feature:1437437-1437560:-1:exon
so has part: feature:1435002-1435387:-1:exon
so has part: feature:1433416-1433522:-1:exon
so has part: feature:1433096-1433273:-1:exon
so has part: feature:1432251-1432357:-1:exon
so has part: feature:1431560-1431705:-1:exon
so has part: feature:1430751-1430880:-1:exon
so has part: feature:1429653-1429903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1445920-1446031:-1:exon

position:1445920:-1
position: 1445920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1443491-1443662:-1:exon

position:1443491:-1
position: 1443491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443662:-1
position: 1443662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1442648-1442751:-1:exon

position:1442648:-1
position: 1442648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442751:-1
position: 1442751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1440997-1441230:-1:exon

position:1440997:-1
position: 1440997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441230:-1
position: 1441230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1440048-1440171:-1:exon

position:1440048:-1
position: 1440048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440171:-1
position: 1440171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1439739-1439842:-1:exon

position:1439739:-1
position: 1439739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439842:-1
position: 1439842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1437437-1437560:-1:exon

position:1437437:-1
position: 1437437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437560:-1
position: 1437560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1435002-1435387:-1:exon

position:1435002:-1
position: 1435002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435387:-1
position: 1435387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1433416-1433522:-1:exon

position:1433416:-1
position: 1433416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433522:-1
position: 1433522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1433096-1433273:-1:exon

position:1433096:-1
position: 1433096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433273:-1
position: 1433273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1432251-1432357:-1:exon

position:1432251:-1
position: 1432251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432357:-1
position: 1432357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1431560-1431705:-1:exon

position:1431560:-1
position: 1431560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431705:-1
position: 1431705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1430751-1430880:-1:exon

position:1430751:-1
position: 1430751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430880:-1
position: 1430880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1429653-1429903:-1:exon

position:1429903:-1
position: 1429903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUGP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 1
translation: MQRACVNDAGGAGFPRGALWEKGGDILRAMDGSKDAPGKTSRWFGVTVPKSVKTNVNILHQEKLIAQKKREIEAKLERQAKRSHLANQQASQASDDDSGDGESSVSNKFANDGSFLQQFLKLQKEKLGSDASSSSAKASVANPPAASTTKKPSLSGKRPNLSVTSMLNQVKNYTHSKQTPVTNRLSVFQSPDDEDEEEDYEQWLEIKICPPEDTRTRRVVEKLARVVAEGGPDLEKVALEDCKDNPTFAFLHDKNSPEFLYYRKKLAEMWKKGQDPEEVPLQKVSPPEDEETKDCAEKLARFVADGGPVVEMVALKNHRENQSFRFLYDPGSSGYKYYRQKLEEYRKANDDAEGVPPIPAANLKRKVPPKGAPSSSSSSSSSSSSSSSSSSSSSVALLPTPAAPPAKPLQPLPPAPATKKKRKSRWGPEEEKVDLPPPELTQQTEDPSPTPLSFQDLKGLGYAKGKPVGLVGVTELSDAQRKQLKEQQEMQQIYDIIIKHKQAMQEMQIMWEKTVKEHQSGYDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGFQMLMKMGWKEGEGLGSERQGIKAPVNKGVTAVDGAGFGIDRPADLTKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: complement(join(1429877..1429903,1430751..1430880,1431560..1431705,1432251..1432357,1433096..1433273,1433416..1433522,1435002..1435387,1437437..1437560,1439739..1439842,1440048..1440171,1440997..1441230,1442648..1442751,1443491..1443662,1445920..1446031))
location: region:1429877-1446031:-1
so has part: feature:1445920-1446031:-1:exon
so has part: feature:1443491-1443662:-1:exon
so has part: feature:1442648-1442751:-1:exon
so has part: feature:1440997-1441230:-1:exon
so has part: feature:1440048-1440171:-1:exon
so has part: feature:1439739-1439842:-1:exon
so has part: feature:1437437-1437560:-1:exon
so has part: feature:1435002-1435387:-1:exon
so has part: feature:1433416-1433522:-1:exon
so has part: feature:1433096-1433273:-1:exon
so has part: feature:1432251-1432357:-1:exon
so has part: feature:1431560-1431705:-1:exon
so has part: feature:1430751-1430880:-1:exon
so has part: feature:1429877-1429903:-1:exon

XP_032992399.1
type: Protein
SIO_000068: ncbiprotein

position:1429877:-1
position: 1429877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445920-1446031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443491-1443662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1442648-1442751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440997-1441230:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1440048-1440171:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439739-1439842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1437437-1437560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1435002-1435387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1433416-1433522:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1433096-1433273:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1432251-1432357:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1431560-1431705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430751-1430880:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1429877-1429903:-1:exon

MAU2
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: MAU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1447725..1472042
location: region:1447725-1472042:1
so has part: feature:1447725-1472042:1:exon
subclass of: SO_0000010

117039410
type: Gene
SIO_000068: ncbigene

position:1447725:1
position: 1447725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472042:1
position: 1472042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447725-1472042:1:exon

MAU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: MAU2
product: MAU2 sister chromatid cohesion factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033136510.1
SIO_010081: MAU2
subclass of: SO_0000673
so part of: MAU2
location: join(1447725..1448294,1450765..1450782,1451005..1451070,1452212..1452307,1452909..1453003,1453522..1453549,1455328..1455483,1456850..1456996,1458175..1458265,1459349..1459452,1461059..1461136,1461752..1461817,1461999..1462082,1462308..1462357,1464188..1464265,1466033..1466144,1467683..1467773,1468768..1468895,1470104..1472042)
location: region:1447725-1472042:1
so has part: feature:1447725-1448294:1:exon
so has part: feature:1450765-1450782:1:exon
so has part: feature:1451005-1451070:1:exon
so has part: feature:1452212-1452307:1:exon
so has part: feature:1452909-1453003:1:exon
so has part: feature:1453522-1453549:1:exon
so has part: feature:1455328-1455483:1:exon
so has part: feature:1456850-1456996:1:exon
so has part: feature:1458175-1458265:1:exon
so has part: feature:1459349-1459452:1:exon
so has part: feature:1461059-1461136:1:exon
so has part: feature:1461752-1461817:1:exon
so has part: feature:1461999-1462082:1:exon
so has part: feature:1462308-1462357:1:exon
so has part: feature:1464188-1464265:1:exon
so has part: feature:1466033-1466144:1:exon
so has part: feature:1467683-1467773:1:exon
so has part: feature:1468768-1468895:1:exon
so has part: feature:1470104-1472042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1447725-1448294:1:exon

position:1448294:1
position: 1448294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1450765-1450782:1:exon

position:1450765:1
position: 1450765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450782:1
position: 1450782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1451005-1451070:1:exon

position:1451005:1
position: 1451005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451070:1
position: 1451070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1452212-1452307:1:exon

position:1452212:1
position: 1452212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452307:1
position: 1452307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1452909-1453003:1:exon

position:1452909:1
position: 1452909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453003:1
position: 1453003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1453522-1453549:1:exon

position:1453522:1
position: 1453522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453549:1
position: 1453549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1455328-1455483:1:exon

position:1455328:1
position: 1455328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455483:1
position: 1455483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1456850-1456996:1:exon

position:1456850:1
position: 1456850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456996:1
position: 1456996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1458175-1458265:1:exon

position:1458175:1
position: 1458175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458265:1
position: 1458265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1459349-1459452:1:exon

position:1459349:1
position: 1459349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459452:1
position: 1459452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1461059-1461136:1:exon

position:1461059:1
position: 1461059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461136:1
position: 1461136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1461752-1461817:1:exon

position:1461752:1
position: 1461752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461817:1
position: 1461817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1461999-1462082:1:exon

position:1461999:1
position: 1461999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462082:1
position: 1462082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1462308-1462357:1:exon

position:1462308:1
position: 1462308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462357:1
position: 1462357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1464188-1464265:1:exon

position:1464188:1
position: 1464188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464265:1
position: 1464265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1466033-1466144:1:exon

position:1466033:1
position: 1466033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466144:1
position: 1466144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1467683-1467773:1:exon

position:1467683:1
position: 1467683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467773:1
position: 1467773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1468768-1468895:1:exon

position:1468768:1
position: 1468768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468895:1
position: 1468895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1470104-1472042:1:exon

position:1470104:1
position: 1470104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: MAU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAU2 chromatid cohesion factor homolog
translation: MAAVGPAAGAAGGSGAANAASSSATATTTAPPPQPASSSSVSATTAPSSSSAAAPQPPSGGPPGGAEAAAAGGGDGNGGGGGGSSSSSASSAAGGPPSSSSPAAAAASSSSGGSSESWYVALLGLAEHFRTSSPPKVRLCVHCLQAVLPRKPPARVEARTHLQLGSVLYHHTRNGEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDTAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCISVNCMDNAEAQFTTALRLTTHQELWAFIVTNLASVYIREGNRHQELYSLLERINPDHNFPVSSHCLRAAAFYIRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAIDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPTTSLASLL
SIO_010081: MAU2
subclass of: SO_0000673
so part of: MAU2
location: join(1447740..1448294,1450765..1450782,1451005..1451070,1452212..1452307,1452909..1453003,1453522..1453549,1455328..1455483,1456850..1456996,1458175..1458265,1459349..1459452,1461059..1461136,1461752..1461817,1461999..1462082,1462308..1462357,1464188..1464265,1466033..1466144,1467683..1467773,1468768..1468895,1470104..1470178)
location: region:1447740-1470178:1
so has part: feature:1447740-1448294:1:exon
so has part: feature:1450765-1450782:1:exon
so has part: feature:1451005-1451070:1:exon
so has part: feature:1452212-1452307:1:exon
so has part: feature:1452909-1453003:1:exon
so has part: feature:1453522-1453549:1:exon
so has part: feature:1455328-1455483:1:exon
so has part: feature:1456850-1456996:1:exon
so has part: feature:1458175-1458265:1:exon
so has part: feature:1459349-1459452:1:exon
so has part: feature:1461059-1461136:1:exon
so has part: feature:1461752-1461817:1:exon
so has part: feature:1461999-1462082:1:exon
so has part: feature:1462308-1462357:1:exon
so has part: feature:1464188-1464265:1:exon
so has part: feature:1466033-1466144:1:exon
so has part: feature:1467683-1467773:1:exon
so has part: feature:1468768-1468895:1:exon
so has part: feature:1470104-1470178:1:exon

XP_032992401.1
type: Protein
SIO_000068: ncbiprotein

position:1447740:1
position: 1447740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470178:1
position: 1470178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447740-1448294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1450765-1450782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1451005-1451070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1452212-1452307:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1452909-1453003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1453522-1453549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455328-1455483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456850-1456996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458175-1458265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1459349-1459452:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1461059-1461136:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1461752-1461817:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1461999-1462082:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1462308-1462357:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1464188-1464265:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1466033-1466144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1467683-1467773:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1468768-1468895:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1470104-1470178:1:exon

GATAD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: GATAD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1478150..1553173
location: region:1478150-1553173:1
so has part: feature:1478150-1553173:1:exon
subclass of: SO_0000010

117039427
type: Gene
SIO_000068: ncbigene

position:1478150:1
position: 1478150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553173:1
position: 1553173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478150-1553173:1:exon

GATAD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GATAD2A
product: GATA zinc finger domain containing 2A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033136534.1
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1478150..1478203,1516972..1517060,1527975..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544798..1544986,1547131..1547416,1549329..1549621,1551837..1552023,1552958..1553173)
location: region:1478150-1553173:1
so has part: feature:1478150-1478203:1:exon
so has part: feature:1516972-1517060:1:exon
so has part: feature:1527975-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544798-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1552023:1:exon
so has part: feature:1552958-1553173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1478150-1478203:1:exon

position:1478203:1
position: 1478203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1516972-1517060:1:exon

position:1516972:1
position: 1516972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517060:1
position: 1517060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1527975-1528252:1:exon

position:1527975:1
position: 1527975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528252:1
position: 1528252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1538070-1538199:1:exon

position:1538070:1
position: 1538070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538199:1
position: 1538199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1539384-1539515:1:exon

position:1539384:1
position: 1539384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539515:1
position: 1539515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1541726-1541818:1:exon

position:1541726:1
position: 1541726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541818:1
position: 1541818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1543116-1543244:1:exon

position:1543116:1
position: 1543116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543244:1
position: 1543244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1544798-1544986:1:exon

position:1544798:1
position: 1544798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544986:1
position: 1544986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1547131-1547416:1:exon

position:1547131:1
position: 1547131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547416:1
position: 1547416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1549329-1549621:1:exon

position:1549329:1
position: 1549329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549621:1
position: 1549621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1551837-1552023:1:exon

position:1551837:1
position: 1551837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552023:1
position: 1552023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1552958-1553173:1:exon

position:1552958:1
position: 1552958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GATAD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GATAD2A
product: GATA zinc finger domain containing 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033136532.1
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1524623..1524727,1527975..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544798..1544986,1547131..1547416,1549329..1549621,1551837..1552023,1552958..1553173)
location: region:1524623-1553173:1
so has part: feature:1524623-1524727:1:exon
so has part: feature:1527975-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544798-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1552023:1:exon
so has part: feature:1552958-1553173:1:exon

position:1524623:1
position: 1524623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1524623-1524727:1:exon

position:1524727:1
position: 1524727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1527975-1528252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538070-1538199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1539384-1539515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541726-1541818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543116-1543244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1544798-1544986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547131-1547416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1549329-1549621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1551837-1552023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1552958-1553173:1:exon

GATAD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GATAD2A
product: GATA zinc finger domain containing 2A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033136535.1
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1524623..1524727,1527975..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544798..1544986,1547131..1547416,1549329..1549621,1551837..1551954,1552958..1553173)
location: region:1524623-1553173:1
so has part: feature:1524623-1524727:1:exon
so has part: feature:1527975-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544798-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1551954:1:exon
so has part: feature:1552958-1553173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1524623-1524727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527975-1528252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538070-1538199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1539384-1539515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541726-1541818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543116-1543244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1544798-1544986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547131-1547416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1549329-1549621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1551837-1551954:1:exon

position:1551954:1
position: 1551954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1552958-1553173:1:exon

GATAD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GATAD2A
product: GATA zinc finger domain containing 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033136533.1
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1524623..1524727,1527975..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544819..1544986,1547131..1547416,1549329..1549621,1551837..1552023,1552958..1553173)
location: region:1524623-1553173:1
so has part: feature:1524623-1524727:1:exon
so has part: feature:1527975-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544819-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1552023:1:exon
so has part: feature:1552958-1553173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1524623-1524727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527975-1528252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538070-1538199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1539384-1539515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541726-1541818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543116-1543244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1544819-1544986:1:exon

position:1544819:1
position: 1544819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1547131-1547416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1549329-1549621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1551837-1552023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1552958-1553173:1:exon

GATAD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GATAD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor p66-alpha isoform X1
translation: MLEKTLPELYQSTIMTEEACRTRSQKRALEREITQNDVDCKKMKMDKGLLGAPEANTEGGDLKVKSEPTSGRVQGLLKGGEMKATIKVEVQTGDEPVDMSTSKSDIKRERRVPSPDVIVLSDNEPSSPRMNGLTKIPLKETSTEVLMKSSPEEREQMIKQLKEELRLEEAKLVLLKKLRQSQIQKETTAQKPTGSSGNAVATPPPLVRGTQSITSSKSALLQNSSRIPGTVIPPPLIRGGQQASSKLGSQQNTQIVMPPLVRGAQPISVSPQQIHNIRQHSSSGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNASLLVNIPQASPTSLKGTAVTAAQVNAAATATSVASIINSNDSPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLEAQGKVSAAPSSQDPYTCVQCKTDFTCRWREEKSGSIMCETCMSSNQKKALKAEHTSRLKAAFVKALQQEQEIEQRILQQAASPVQTKPEQIAQQHHSLKQASSQLPRSASTPRGVLHAFSPSPKLQNAASSVAVLGGRQGKRAQRPVGKGSACSWKKTLVNAGGTLNFVNPSLAVHKTAASAVDRQREYLLDMIPPRSISQSATWK
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1524695..1524727,1527975..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544798..1544986,1547131..1547416,1549329..1549621,1551837..1552023,1552958..1553091)
location: region:1524695-1553091:1
so has part: feature:1524695-1524727:1:exon
so has part: feature:1527975-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544798-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1552023:1:exon
so has part: feature:1552958-1553091:1:exon

XP_032992423.1
type: Protein
SIO_000068: ncbiprotein

position:1524695:1
position: 1524695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553091:1
position: 1553091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1524695-1524727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527975-1528252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538070-1538199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1539384-1539515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541726-1541818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543116-1543244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1544798-1544986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547131-1547416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1549329-1549621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1551837-1552023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1552958-1553091:1:exon

GATAD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GATAD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor p66-alpha isoform X4
translation: MLEKTLPELYQSTIMTEEACRTRSQKRALEREITQNDVDCKKMKMDKGLLGAPEANTEGGDLKVKSEPTSGRVQGLLKGGEMKATIKVEVQTGDEPVDMSTSKSDIKRERRVPSPDVIVLSDNEPSSPRMNGLTKIPLKETSTEVLMKSSPEEREQMIKQLKEELRLEEAKLVLLKKLRQSQIQKETTAQKPTGSSGNAVATPPPLVRGTQSITSSKSALLQNSSRIPGTVIPPPLIRGGQQASSKLGSQQNTQIVMPPLVRGAQPISVSPQQIHNIRQHSSSGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNASLLVNIPQASPTSLKGTAVTAAQVNAAATATSVASIINSNDSPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLEAQGKVSAAPSSQDPYTCVQCKTDFTCRWREEKSGSIMCETCMSSNQKKALKAEHTSRLKAAFVKALQQEQEIEQRILQQAASPVQTKPEQIAQQHHSLKQASSQLPRSASTPRGVLHAFSPSPKLQNAASSVAVLGGRQGGTLNFVNPSLAVHKTAASAVDRQREYLLDMIPPRSISQSATWK
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1524695..1524727,1527975..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544798..1544986,1547131..1547416,1549329..1549621,1551837..1551954,1552958..1553091)
location: region:1524695-1553091:1
so has part: feature:1524695-1524727:1:exon
so has part: feature:1527975-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544798-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1551954:1:exon
so has part: feature:1552958-1553091:1:exon

XP_032992426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1524695-1524727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527975-1528252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538070-1538199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1539384-1539515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541726-1541818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543116-1543244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1544798-1544986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547131-1547416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1549329-1549621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1551837-1551954:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1552958-1553091:1:exon

GATAD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GATAD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor p66-alpha isoform X2
translation: MLEKTLPELYQSTIMTEEACRTRSQKRALEREITQNDVDCKKMKMDKGLLGAPEANTEGGDLKVKSEPTSGRVQGLLKGGEMKATIKVEVQTGDEPVDMSTSKSDIKRERRVPSPDVIVLSDNEPSSPRMNGLTKIPLKETSTEVLMKSSPEEREQMIKQLKEELRLEEAKLVLLKKLRQSQIQKETTAQKPTGSSGNAVATPPPLVRGTQSITSSKSALLQNSSRIPGTVIPPPLIRGGQQASSKLGSQQNTQIVMPPLVRGAQQIHNIRQHSSSGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNASLLVNIPQASPTSLKGTAVTAAQVNAAATATSVASIINSNDSPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLEAQGKVSAAPSSQDPYTCVQCKTDFTCRWREEKSGSIMCETCMSSNQKKALKAEHTSRLKAAFVKALQQEQEIEQRILQQAASPVQTKPEQIAQQHHSLKQASSQLPRSASTPRGVLHAFSPSPKLQNAASSVAVLGGRQGKRAQRPVGKGSACSWKKTLVNAGGTLNFVNPSLAVHKTAASAVDRQREYLLDMIPPRSISQSATWK
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1524695..1524727,1527975..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544819..1544986,1547131..1547416,1549329..1549621,1551837..1552023,1552958..1553091)
location: region:1524695-1553091:1
so has part: feature:1524695-1524727:1:exon
so has part: feature:1527975-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544819-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1552023:1:exon
so has part: feature:1552958-1553091:1:exon

XP_032992424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1524695-1524727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527975-1528252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538070-1538199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1539384-1539515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541726-1541818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543116-1543244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1544819-1544986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547131-1547416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1549329-1549621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1551837-1552023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1552958-1553091:1:exon

GATAD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GATAD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor p66-alpha isoform X3
translation: MTEEACRTRSQKRALEREITQNDVDCKKMKMDKGLLGAPEANTEGGDLKVKSEPTSGRVQGLLKGGEMKATIKVEVQTGDEPVDMSTSKSDIKRERRVPSPDVIVLSDNEPSSPRMNGLTKIPLKETSTEVLMKSSPEEREQMIKQLKEELRLEEAKLVLLKKLRQSQIQKETTAQKPTGSSGNAVATPPPLVRGTQSITSSKSALLQNSSRIPGTVIPPPLIRGGQQASSKLGSQQNTQIVMPPLVRGAQPISVSPQQIHNIRQHSSSGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNASLLVNIPQASPTSLKGTAVTAAQVNAAATATSVASIINSNDSPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLEAQGKVSAAPSSQDPYTCVQCKTDFTCRWREEKSGSIMCETCMSSNQKKALKAEHTSRLKAAFVKALQQEQEIEQRILQQAASPVQTKPEQIAQQHHSLKQASSQLPRSASTPRGVLHAFSPSPKLQNAASSVAVLGGRQGKRAQRPVGKGSACSWKKTLVNAGGTLNFVNPSLAVHKTAASAVDRQREYLLDMIPPRSISQSATWK
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: join(1527984..1528252,1538070..1538199,1539384..1539515,1541726..1541818,1543116..1543244,1544798..1544986,1547131..1547416,1549329..1549621,1551837..1552023,1552958..1553091)
location: region:1527984-1553091:1
so has part: feature:1527984-1528252:1:exon
so has part: feature:1538070-1538199:1:exon
so has part: feature:1539384-1539515:1:exon
so has part: feature:1541726-1541818:1:exon
so has part: feature:1543116-1543244:1:exon
so has part: feature:1544798-1544986:1:exon
so has part: feature:1547131-1547416:1:exon
so has part: feature:1549329-1549621:1:exon
so has part: feature:1551837-1552023:1:exon
so has part: feature:1552958-1553091:1:exon

XP_032992425.1
type: Protein
SIO_000068: ncbiprotein

position:1527984:1
position: 1527984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527984-1528252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1538070-1538199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539384-1539515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541726-1541818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1543116-1543244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1544798-1544986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1547131-1547416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1549329-1549621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551837-1552023:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552958-1553091:1:exon

NDUFA13
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: NDUFA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1558118..1563467
location: region:1558118-1563467:1
so has part: feature:1558118-1563467:1:exon
subclass of: SO_0000010

117039625
type: Gene
SIO_000068: ncbigene

position:1558118:1
position: 1558118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563467:1
position: 1563467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558118-1563467:1:exon

NDUFA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: NDUFA13
product: NADH:ubiquinone oxidoreductase subunit A13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033136803.1
SIO_010081: NDUFA13
subclass of: SO_0000673
so part of: NDUFA13
location: join(1558118..1558273,1559825..1559903,1561057..1561128,1562835..1562904,1563248..1563467)
location: region:1558118-1563467:1
so has part: feature:1558118-1558273:1:exon
so has part: feature:1559825-1559903:1:exon
so has part: feature:1561057-1561128:1:exon
so has part: feature:1562835-1562904:1:exon
so has part: feature:1563248-1563467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1558118-1558273:1:exon

position:1558273:1
position: 1558273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1559825-1559903:1:exon

position:1559825:1
position: 1559825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559903:1
position: 1559903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1561057-1561128:1:exon

position:1561057:1
position: 1561057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561128:1
position: 1561128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1562835-1562904:1:exon

position:1562835:1
position: 1562835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562904:1
position: 1562904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1563248-1563467:1:exon

position:1563248:1
position: 1563248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: NDUFA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
translation: MAAGAGKVKQDMPPPGGYGPIDYKRNLPRRGLSGYSLFAIGVGTLFFGYYSIVKWNRERRRLNIEDLETRIALLPLLMAENDRRTLRLLRQNLDEEAKIMKDVPDWKVGESRYHTTRWTAPTVDELYFLHPESKQDEMKFGCQMYV
SIO_010081: NDUFA13
subclass of: SO_0000673
so part of: NDUFA13
location: join(1558174..1558273,1559825..1559903,1561057..1561128,1562835..1562904,1563248..1563367)
location: region:1558174-1563367:1
so has part: feature:1558174-1558273:1:exon
so has part: feature:1559825-1559903:1:exon
so has part: feature:1561057-1561128:1:exon
so has part: feature:1562835-1562904:1:exon
so has part: feature:1563248-1563367:1:exon

XP_032992694.1
type: Protein
SIO_000068: ncbiprotein

position:1558174:1
position: 1558174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563367:1
position: 1563367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558174-1558273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1559825-1559903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561057-1561128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1562835-1562904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1563248-1563367:1:exon

LOC117039685
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1565112..1566930)
location: region:1565112-1566930:-1
so has part: feature:1565112-1566930:-1:exon
subclass of: SO_0000010

117039685
type: Gene
SIO_000068: ncbigene

position:1565112:-1
position: 1565112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566930:-1
position: 1566930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565112-1566930:-1:exon

LOC117039685
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039685
product: uncharacterized LOC117039685
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033136865.1
SIO_010081: LOC117039685
subclass of: SO_0000673
so part of: LOC117039685
location: complement(join(1565112..1565329,1565468..1565625,1566298..1566930))
location: region:1565112-1566930:-1
so has part: feature:1566298-1566930:-1:exon
so has part: feature:1565468-1565625:-1:exon
so has part: feature:1565112-1565329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1566298-1566930:-1:exon

position:1566298:-1
position: 1566298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1565468-1565625:-1:exon

position:1565468:-1
position: 1565468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565625:-1
position: 1565625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1565112-1565329:-1:exon

position:1565329:-1
position: 1565329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117039685
translation: MKQHPGSEGHNLGQRSRRTHLPQRCQDRIPGAEAKDRRKPIAPACHAVPPSSTPENGDSREKRAVRTILVDLRPILEKAVDFSDSSPEMSERDSQNHEEHLQMESGDLPTEGGGGGGHTSETATAASIDSGIHEDVLPPPARDPFRAPSAHAESTRKAPEICPQSGNSTELQETTLLAALTHETKLRTAISSPKITPQEPGAADHELQSIKPSASLPDFHLPTQLLLQRLQETTTSRHHSLIAQVLSSLREELLVEEQPPLDGGHKATPLLQLPSIKAAERKKGGQEMKHFKPGQEAAKRMLGKFTWHRCHRSVYGAGSAPQATDL
SIO_010081: LOC117039685
subclass of: SO_0000673
so part of: LOC117039685
location: complement(join(1565140..1565329,1565468..1565625,1566298..1566930))
location: region:1565140-1566930:-1
so has part: feature:1566298-1566930:-1:exon
so has part: feature:1565468-1565625:-1:exon
so has part: feature:1565140-1565329:-1:exon

XP_032992756.1
type: Protein
SIO_000068: ncbiprotein

position:1565140:-1
position: 1565140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1566298-1566930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1565468-1565625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1565140-1565329:-1:exon

LOC117039775
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039775
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1570691..1570797)
location: region:1570691-1570797:-1
so has part: feature:1570691-1570797:-1:exon
subclass of: SO_0000623

117039775
type: Gene
SIO_000068: ncbigene

position:1570691:-1
position: 1570691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570797:-1
position: 1570797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1570691-1570797:-1:exon

LOC117039775
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 80427
nc RNA class: snRNA
gene: LOC117039775
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004425794.1
SIO_010081: LOC117039775
subclass of: SO_0000673
so part of: LOC117039775
location: complement(1570691..1570797)
location: region:1570691-1570797:-1
so has part: feature:1570691-1570797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1570691-1570797:-1:exon

TMEM259
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1573251..1593118
location: region:1573251-1593118:1
so has part: feature:1573251-1593118:1:exon
subclass of: SO_0000010

117039432
type: Gene
SIO_000068: ncbigene

position:1573251:1
position: 1573251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593118:1
position: 1593118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573251-1593118:1:exon

TMEM259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: TMEM259
product: transmembrane protein 259, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033136539.1
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: join(1573251..1573573,1577639..1577911,1581465..1581636,1582545..1582655,1583764..1583886,1584816..1584916,1586487..1586544,1587799..1587882,1589374..1589506,1591182..1591281,1592209..1593118)
location: region:1573251-1593118:1
so has part: feature:1573251-1573573:1:exon
so has part: feature:1577639-1577911:1:exon
so has part: feature:1581465-1581636:1:exon
so has part: feature:1582545-1582655:1:exon
so has part: feature:1583764-1583886:1:exon
so has part: feature:1584816-1584916:1:exon
so has part: feature:1586487-1586544:1:exon
so has part: feature:1587799-1587882:1:exon
so has part: feature:1589374-1589506:1:exon
so has part: feature:1591182-1591281:1:exon
so has part: feature:1592209-1593118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573251-1573573:1:exon

position:1573573:1
position: 1573573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577639-1577911:1:exon

position:1577639:1
position: 1577639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577911:1
position: 1577911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1581465-1581636:1:exon

position:1581465:1
position: 1581465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581636:1
position: 1581636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1582545-1582655:1:exon

position:1582545:1
position: 1582545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582655:1
position: 1582655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1583764-1583886:1:exon

position:1583764:1
position: 1583764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583886:1
position: 1583886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1584816-1584916:1:exon

position:1584816:1
position: 1584816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584916:1
position: 1584916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1586487-1586544:1:exon

position:1586487:1
position: 1586487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586544:1
position: 1586544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1587799-1587882:1:exon

position:1587799:1
position: 1587799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587882:1
position: 1587882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1589374-1589506:1:exon

position:1589374:1
position: 1589374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589506:1
position: 1589506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1591182-1591281:1:exon

position:1591182:1
position: 1591182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591281:1
position: 1591281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1592209-1593118:1:exon

position:1592209:1
position: 1592209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: TMEM259
product: transmembrane protein 259, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033136540.1
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: join(1573251..1573573,1577639..1577911,1581465..1581582,1582545..1582655,1583764..1583886,1584816..1584916,1586487..1586544,1587799..1587882,1589374..1589506,1591182..1591281,1592209..1593118)
location: region:1573251-1593118:1
so has part: feature:1573251-1573573:1:exon
so has part: feature:1577639-1577911:1:exon
so has part: feature:1581465-1581582:1:exon
so has part: feature:1582545-1582655:1:exon
so has part: feature:1583764-1583886:1:exon
so has part: feature:1584816-1584916:1:exon
so has part: feature:1586487-1586544:1:exon
so has part: feature:1587799-1587882:1:exon
so has part: feature:1589374-1589506:1:exon
so has part: feature:1591182-1591281:1:exon
so has part: feature:1592209-1593118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573251-1573573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577639-1577911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1581465-1581582:1:exon

position:1581582:1
position: 1581582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1582545-1582655:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583764-1583886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1584816-1584916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586487-1586544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587799-1587882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589374-1589506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1591182-1591281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1592209-1593118:1:exon

TMEM259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: TMEM259
product: transmembrane protein 259, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033136541.1
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: join(1573253..1573573,1577639..1577911,1581465..1581582,1582545..1582655,1583764..1583886,1584816..1584916,1586487..1586544,1587799..1587882,1589374..1589510)
location: region:1573253-1589510:1
so has part: feature:1573253-1573573:1:exon
so has part: feature:1577639-1577911:1:exon
so has part: feature:1581465-1581582:1:exon
so has part: feature:1582545-1582655:1:exon
so has part: feature:1583764-1583886:1:exon
so has part: feature:1584816-1584916:1:exon
so has part: feature:1586487-1586544:1:exon
so has part: feature:1587799-1587882:1:exon
so has part: feature:1589374-1589510:1:exon

position:1573253:1
position: 1573253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589510:1
position: 1589510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573253-1573573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577639-1577911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1581465-1581582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582545-1582655:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583764-1583886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1584816-1584916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586487-1586544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587799-1587882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589374-1589510:1:exon

TMEM259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membralin isoform X1
translation: MSENQANHHHHPMNNNVGGRAPAGNNRGVRNLNQNPLINVRDRLFHALFFKMAVTYARLFPPSFRRIFEFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAPIFLQFCESDRFPGMVVEAAGGEEEEEEEEEEMSVEMFENSSIKFELDIEPKVFLKPSRLGGAKVPAPNESQEFSFSGEPASKGMQPLSETVSEFEMLAKAVWPQEEYIVEYSFEYGFLRLSHSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFISMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQNQQGGAQTTLQDNLNNNNTVAPADPAGPRPHLDGGPAGDGPLAPEDAHTAAVVAATVASLGDNFNWVAETAVIAEASFMSNLSSSLLDPSVAPEAAGPSGDLQDVASASSVMTHLLVSSDRAEAPVGSIAIEVTSTAGVPSPGGSASSAAAAAATPLSPAREDIPQPPESSTGRGKPPDTDCLAGHCPLGSVASGPPGEASEGGLAQADSSTPAPLDSAADAGPDPRRLS
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: join(1573349..1573573,1577639..1577911,1581465..1581636,1582545..1582655,1583764..1583886,1584816..1584916,1586487..1586544,1587799..1587882,1589374..1589506,1591182..1591281,1592209..1592982)
location: region:1573349-1592982:1
so has part: feature:1573349-1573573:1:exon
so has part: feature:1577639-1577911:1:exon
so has part: feature:1581465-1581636:1:exon
so has part: feature:1582545-1582655:1:exon
so has part: feature:1583764-1583886:1:exon
so has part: feature:1584816-1584916:1:exon
so has part: feature:1586487-1586544:1:exon
so has part: feature:1587799-1587882:1:exon
so has part: feature:1589374-1589506:1:exon
so has part: feature:1591182-1591281:1:exon
so has part: feature:1592209-1592982:1:exon

XP_032992430.1
type: Protein
SIO_000068: ncbiprotein

position:1573349:1
position: 1573349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592982:1
position: 1592982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573349-1573573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577639-1577911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1581465-1581636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582545-1582655:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583764-1583886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1584816-1584916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586487-1586544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587799-1587882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589374-1589506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1591182-1591281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1592209-1592982:1:exon

TMEM259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membralin isoform X2
translation: MSENQANHHHHPMNNNVGGRAPAGNNRGVRNLNQNPLINVRDRLFHALFFKMAVTYARLFPPSFRRIFEFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAPIFLQFCESDRFPGMVVEAAGGEEEEEEEEEEMSVEMFENSSIKFELDIEPKVFLKPSRLGGAKVPAPNESQEFSFSGEPASKVWPQEEYIVEYSFEYGFLRLSHSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFISMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQNQQGGAQTTLQDNLNNNNTVAPADPAGPRPHLDGGPAGDGPLAPEDAHTAAVVAATVASLGDNFNWVAETAVIAEASFMSNLSSSLLDPSVAPEAAGPSGDLQDVASASSVMTHLLVSSDRAEAPVGSIAIEVTSTAGVPSPGGSASSAAAAAATPLSPAREDIPQPPESSTGRGKPPDTDCLAGHCPLGSVASGPPGEASEGGLAQADSSTPAPLDSAADAGPDPRRLS
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: join(1573349..1573573,1577639..1577911,1581465..1581582,1582545..1582655,1583764..1583886,1584816..1584916,1586487..1586544,1587799..1587882,1589374..1589506,1591182..1591281,1592209..1592982)
location: region:1573349-1592982:1
so has part: feature:1573349-1573573:1:exon
so has part: feature:1577639-1577911:1:exon
so has part: feature:1581465-1581582:1:exon
so has part: feature:1582545-1582655:1:exon
so has part: feature:1583764-1583886:1:exon
so has part: feature:1584816-1584916:1:exon
so has part: feature:1586487-1586544:1:exon
so has part: feature:1587799-1587882:1:exon
so has part: feature:1589374-1589506:1:exon
so has part: feature:1591182-1591281:1:exon
so has part: feature:1592209-1592982:1:exon

XP_032992431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573349-1573573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577639-1577911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1581465-1581582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582545-1582655:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583764-1583886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1584816-1584916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586487-1586544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587799-1587882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589374-1589506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1591182-1591281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1592209-1592982:1:exon

TMEM259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membralin isoform X3
translation: MSENQANHHHHPMNNNVGGRAPAGNNRGVRNLNQNPLINVRDRLFHALFFKMAVTYARLFPPSFRRIFEFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAPIFLQFCESDRFPGMVVEAAGGEEEEEEEEEEMSVEMFENSSIKFELDIEPKVFLKPSRLGGAKVPAPNESQEFSFSGEPASKVWPQEEYIVEYSFEYGFLRLSHSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFISMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLR
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: join(1573349..1573573,1577639..1577911,1581465..1581582,1582545..1582655,1583764..1583886,1584816..1584916,1586487..1586544,1587799..1587882,1589374..1589510)
location: region:1573349-1589510:1
so has part: feature:1573349-1573573:1:exon
so has part: feature:1577639-1577911:1:exon
so has part: feature:1581465-1581582:1:exon
so has part: feature:1582545-1582655:1:exon
so has part: feature:1583764-1583886:1:exon
so has part: feature:1584816-1584916:1:exon
so has part: feature:1586487-1586544:1:exon
so has part: feature:1587799-1587882:1:exon
so has part: feature:1589374-1589510:1:exon

XP_032992432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573349-1573573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577639-1577911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1581465-1581582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582545-1582655:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583764-1583886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1584816-1584916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586487-1586544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587799-1587882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589374-1589510:1:exon

GRIN3B
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: GRIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1602082..1635810)
location: region:1602082-1635810:-1
so has part: feature:1602082-1635810:-1:exon
subclass of: SO_0000010

117039686
type: Gene
SIO_000068: ncbigene

position:1602082:-1
position: 1602082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635810:-1
position: 1635810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1602082-1635810:-1:exon

GRIN3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: GRIN3B
product: glutamate ionotropic receptor NMDA type subunit 3B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136866.1
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: complement(join(1602082..1602550,1604206..1604273,1604842..1605006,1606781..1606932,1611712..1611827,1613659..1613804,1614498..1615259,1617093..1617375,1618120..1618715,1635163..1635810))
location: region:1602082-1635810:-1
so has part: feature:1635163-1635810:-1:exon
so has part: feature:1618120-1618715:-1:exon
so has part: feature:1617093-1617375:-1:exon
so has part: feature:1614498-1615259:-1:exon
so has part: feature:1613659-1613804:-1:exon
so has part: feature:1611712-1611827:-1:exon
so has part: feature:1606781-1606932:-1:exon
so has part: feature:1604842-1605006:-1:exon
so has part: feature:1604206-1604273:-1:exon
so has part: feature:1602082-1602550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1635163-1635810:-1:exon

position:1635163:-1
position: 1635163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1618120-1618715:-1:exon

position:1618120:-1
position: 1618120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618715:-1
position: 1618715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1617093-1617375:-1:exon

position:1617093:-1
position: 1617093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617375:-1
position: 1617375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1614498-1615259:-1:exon

position:1614498:-1
position: 1614498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615259:-1
position: 1615259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1613659-1613804:-1:exon

position:1613659:-1
position: 1613659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613804:-1
position: 1613804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1611712-1611827:-1:exon

position:1611712:-1
position: 1611712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611827:-1
position: 1611827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1606781-1606932:-1:exon

position:1606781:-1
position: 1606781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606932:-1
position: 1606932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1604842-1605006:-1:exon

position:1604842:-1
position: 1604842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605006:-1
position: 1605006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1604206-1604273:-1:exon

position:1604206:-1
position: 1604206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604273:-1
position: 1604273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1602082-1602550:-1:exon

position:1602550:-1
position: 1602550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRIN3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: GRIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 3B
translation: MERRRALCCWWCLSLLLAGQPAARGHPQPCHILARIGHTVRLGALLPRAGEAESRARNALARASRTATSALPYNLSLEVVPGAPRQRDPASLARWLCQALVVRGVAAVLAFPASRRELLQLDFAAAFLEIPFVSIREEEEEEEEEEGEGRGGQSAKTPMPFRSRNPFHLHMDRSNDFETLLELLANIFRSNKWHEVTLVLCQAWDVPAFVDLWSSYAELERTAVVDLSFLEETEAARLLRRHLEEYRELPGPALLFGCDARHSQLVFRTARDLGVLQEFHWVLGQPQNVDELRTEGLPLGLLAYGEVGRPSLEQFVHDAVELVSRAISKAVYIRPDLALIQSMVNCNDKHTVASESSGRYLSQFLANTSFRGQTGEVFVHNTSRVHTDRHYKVWSLLRDSVGQPTWVTVGTWKGGEMEVEEGTWPQHLQRRNQAEGFCRMKLRVVTLVEHPFVFTREVDEEGNCPAGQLCLDPRTNDSAVLDTLFDELNSENGSVPAEYRKCCYGYCIDLLEKLAEDLPFDFDLYIVGDGKYGAWKNGRWTGLVGDLLSGTAHMAVTSFSINSARSQVIDFTSPFFSTSLGILVRVRDTASPIGAFMWPLHWTMWVGIFVALHVTALFLTLYEWKSPYGMTPHGRNRMKIFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEEYIKKSFPDMHEYMRRLSVPTTPAGIKMLKTNPPKLNAFIMDKSLLDYEVSIDSDCKLLTVGKPFAIEGYGIGLPQNSPLTSNISEFISRYKSAGFMDLLHDKWYKMVPCGKRVFAVTETLQMGIYHFSGLFVLLCIGLCGSLLTSLGEHIFYRLILPRIKRKKKFNYWLHTSQKIHRALNMGLEEQRIKKLNLEKRCNIQKSQEEPEVPPPPPPSNQPGWNNLRRVAVKKEDKRVHFNIENAPDEASDDEREAPVWHCMNGQDPQQGSKEAKEKELKELESKIKDMREQLRAALVRKSELMVALGPPPKAPRLPPALKALIKESNEDR
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: complement(join(1602151..1602550,1604206..1604273,1604842..1605006,1606781..1606932,1611712..1611827,1613659..1613804,1614498..1615259,1617093..1617375,1618120..1618715,1635163..1635654))
location: region:1602151-1635654:-1
so has part: feature:1635163-1635654:-1:exon
so has part: feature:1618120-1618715:-1:exon
so has part: feature:1617093-1617375:-1:exon
so has part: feature:1614498-1615259:-1:exon
so has part: feature:1613659-1613804:-1:exon
so has part: feature:1611712-1611827:-1:exon
so has part: feature:1606781-1606932:-1:exon
so has part: feature:1604842-1605006:-1:exon
so has part: feature:1604206-1604273:-1:exon
so has part: feature:1602151-1602550:-1:exon

XP_032992757.1
type: Protein
SIO_000068: ncbiprotein

position:1602151:-1
position: 1602151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635654:-1
position: 1635654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1635163-1635654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1618120-1618715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1617093-1617375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1614498-1615259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1613659-1613804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1611712-1611827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1606781-1606932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1604842-1605006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1604206-1604273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1602151-1602550:-1:exon

LOC117039474
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1670902..>1699313)
location: region:1670902-1699313:-1
so has part: feature:1670902-1699313:-1:exon
subclass of: SO_0000010

117039474
type: Gene
SIO_000068: ncbigene

position:1670902:-1
position: 1670902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699313:-1
position: 1699313
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1670902-1699313:-1:exon

LOC117039474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039474
product: WD repeat-containing protein 18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033136586.1
SIO_010081: LOC117039474
subclass of: SO_0000673
so part of: LOC117039474
location: complement(join(1670902..1671306,1672389..1672457,1682633..1682799,1691145..1691269,1691634..1691698,1693719..1693862,1696276..1696417,1699117..>1699313))
location: region:1670902-1699313:-1
so has part: feature:1699117-1699313:-1:exon
so has part: feature:1696276-1696417:-1:exon
so has part: feature:1693719-1693862:-1:exon
so has part: feature:1691634-1691698:-1:exon
so has part: feature:1691145-1691269:-1:exon
so has part: feature:1682633-1682799:-1:exon
so has part: feature:1672389-1672457:-1:exon
so has part: feature:1670902-1671306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1699117-1699313:-1:exon

position:1699117:-1
position: 1699117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1696276-1696417:-1:exon

position:1696276:-1
position: 1696276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696417:-1
position: 1696417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1693719-1693862:-1:exon

position:1693719:-1
position: 1693719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693862:-1
position: 1693862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1691634-1691698:-1:exon

position:1691634:-1
position: 1691634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691698:-1
position: 1691698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1691145-1691269:-1:exon

position:1691145:-1
position: 1691145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691269:-1
position: 1691269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1682633-1682799:-1:exon

position:1682633:-1
position: 1682633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1682799:-1
position: 1682799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1672389-1672457:-1:exon

position:1672389:-1
position: 1672389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1672457:-1
position: 1672457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1670902-1671306:-1:exon

position:1671306:-1
position: 1671306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 18-like
translation: LLIFSSLPPPPKYVGVASLPQVSSGNLLAILNRHYQDLSCLAFTDDSSHFLSGAKDSLVIVWNLYSVLQAENAQSPEPRHVWSRHSLPITDLCCGMGGPMARAATASLDQTAKLWEISSGDLLLSVVFDVGVLSVTLDLTEYHMFCGGMDGSIFQVNLCAWPVQRERGFQTERDSAKIFKGHRNQVTCLSVSTDGSLLLSGSHDETVRLWDIQSKQCLRTVNYKGPVTNAFITLAPANMLNPESKPRVPLPKFSRHLYTMENAGSPASEGMMLCLGMHQKGSGESNLEKKERLYSQMCATREKNLMGDQEQLKIQVTQLEEEVGTLRKINKGLFDFSSRLIMKQGK
SIO_010081: LOC117039474
subclass of: SO_0000673
so part of: LOC117039474
location: complement(join(1671175..1671306,1672389..1672457,1682633..1682799,1691145..1691269,1691634..1691698,1693719..1693862,1696276..1696417,1699117..>1699313))
location: region:1671175-1699313:-1
so has part: feature:1699117-1699313:-1:exon
so has part: feature:1696276-1696417:-1:exon
so has part: feature:1693719-1693862:-1:exon
so has part: feature:1691634-1691698:-1:exon
so has part: feature:1691145-1691269:-1:exon
so has part: feature:1682633-1682799:-1:exon
so has part: feature:1672389-1672457:-1:exon
so has part: feature:1671175-1671306:-1:exon

XP_032992477.1
type: Protein
SIO_000068: ncbiprotein

position:1671175:-1
position: 1671175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1699117-1699313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696276-1696417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693719-1693862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1691634-1691698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1691145-1691269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1682633-1682799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1672389-1672457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1671175-1671306:-1:exon

LOC117039522
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1764078..1806225)
location: region:1764078-1806225:-1
so has part: feature:1764078-1806225:-1:exon
subclass of: SO_0000010

117039522
type: Gene
SIO_000068: ncbigene

position:1764078:-1
position: 1764078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806225:-1
position: 1806225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764078-1806225:-1:exon

LOC117039522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039522
product: WD repeat-containing protein 18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033136664.1
SIO_010081: LOC117039522
subclass of: SO_0000673
so part of: LOC117039522
location: complement(join(1764078..1764239,1765309..1765377,1775959..1776125,1784226..1784350,1784714..1784778,1786922..1787065,1789419..1789560,1794031..1794164,1802272..1802382,1805959..1806225))
location: region:1764078-1806225:-1
so has part: feature:1805959-1806225:-1:exon
so has part: feature:1802272-1802382:-1:exon
so has part: feature:1794031-1794164:-1:exon
so has part: feature:1789419-1789560:-1:exon
so has part: feature:1786922-1787065:-1:exon
so has part: feature:1784714-1784778:-1:exon
so has part: feature:1784226-1784350:-1:exon
so has part: feature:1775959-1776125:-1:exon
so has part: feature:1765309-1765377:-1:exon
so has part: feature:1764078-1764239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1805959-1806225:-1:exon

position:1805959:-1
position: 1805959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1802272-1802382:-1:exon

position:1802272:-1
position: 1802272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1802382:-1
position: 1802382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1794031-1794164:-1:exon

position:1794031:-1
position: 1794031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794164:-1
position: 1794164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1789419-1789560:-1:exon

position:1789419:-1
position: 1789419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789560:-1
position: 1789560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1786922-1787065:-1:exon

position:1786922:-1
position: 1786922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787065:-1
position: 1787065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1784714-1784778:-1:exon

position:1784714:-1
position: 1784714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784778:-1
position: 1784778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1784226-1784350:-1:exon

position:1784226:-1
position: 1784226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784350:-1
position: 1784350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1775959-1776125:-1:exon

position:1775959:-1
position: 1775959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776125:-1
position: 1776125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1765309-1765377:-1:exon

position:1765309:-1
position: 1765309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765377:-1
position: 1765377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1764078-1764239:-1:exon

position:1764239:-1
position: 1764239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117039522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 18-like
translation: MAAAGGPVEVALVSAAEAASSSGGGCSVWEVGSGASVAGYRGFSCAARGMALLGGEHLLGAQLGKACVGAWELQRKDQLQQKIICPGLVSCLAAAPNGLYILAGIAESIYLWEVSSGNLLAILNRHYQDLSCLAFTDDSSHFLSGAKDSLVIVWNLYSVLQAENAQSPEPRHVWSRHSLPITDLCCGMGGPMARAATASLDQTAKLWEISSGDLLLSVVFDVGVLSVTLDLTEYHMFCGGMDGSIFQVDLCAWPVQRERGFQTERDSAKIFKGHRNQVTCLSVSTDGSLLLSGSHDETVRLWDIQSKQCLRTVNYKGPVTNAFITLAPANMLNPESKPRVPLPKFSRHLYTMENAGSPASEGMMLCLGMHQKGSGESNLEKKERLYSQMCATREKNLMGDQEQLKIQVTQLEEEVGTLRKINKGLFDFSSRLIMKQGK
SIO_010081: LOC117039522
subclass of: SO_0000673
so part of: LOC117039522
location: complement(join(1764108..1764239,1765309..1765377,1775959..1776125,1784226..1784350,1784714..1784778,1786922..1787065,1789419..1789560,1794031..1794164,1802272..1802382,1805959..1806186))
location: region:1764108-1806186:-1
so has part: feature:1805959-1806186:-1:exon
so has part: feature:1802272-1802382:-1:exon
so has part: feature:1794031-1794164:-1:exon
so has part: feature:1789419-1789560:-1:exon
so has part: feature:1786922-1787065:-1:exon
so has part: feature:1784714-1784778:-1:exon
so has part: feature:1784226-1784350:-1:exon
so has part: feature:1775959-1776125:-1:exon
so has part: feature:1765309-1765377:-1:exon
so has part: feature:1764108-1764239:-1:exon

XP_032992555.1
type: Protein
SIO_000068: ncbiprotein

position:1764108:-1
position: 1764108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806186:-1
position: 1806186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805959-1806186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1802272-1802382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1794031-1794164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1789419-1789560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1786922-1787065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1784714-1784778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1784226-1784350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1775959-1776125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1765309-1765377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1764108-1764239:-1:exon

KXD1
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: KXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1809356..1814278)
location: region:1809356-1814278:-1
so has part: feature:1809356-1814278:-1:exon
subclass of: SO_0000010

117039535
type: Gene
SIO_000068: ncbigene

position:1809356:-1
position: 1809356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814278:-1
position: 1814278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809356-1814278:-1:exon

KXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: KXD1
product: KxDL motif containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033136684.1
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(1809356..1809693,1810796..1810842,1811382..1811534,1813402..1813523,1814248..1814278))
location: region:1809356-1814278:-1
so has part: feature:1814248-1814278:-1:exon
so has part: feature:1813402-1813523:-1:exon
so has part: feature:1811382-1811534:-1:exon
so has part: feature:1810796-1810842:-1:exon
so has part: feature:1809356-1809693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1814248-1814278:-1:exon

position:1814248:-1
position: 1814248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1813402-1813523:-1:exon

position:1813402:-1
position: 1813402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813523:-1
position: 1813523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1811382-1811534:-1:exon

position:1811382:-1
position: 1811382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1811534:-1
position: 1811534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1810796-1810842:-1:exon

position:1810796:-1
position: 1810796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1810842:-1
position: 1810842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1809356-1809693:-1:exon

position:1809693:-1
position: 1809693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: KXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kxDL motif-containing protein 1
translation: MEPTASAVFCSRVLGMVNSEDVNAIILAQKNMLDRFEKTNEMLLNFNNLSGVRMQQMSEQFLHHTRTLVEMKKDLDSIFRRIRTLKGKLAKQYPEAFSNIHESPILEDDDFDPIPKSTATTIATSEQSTESCDTSPDIISPATSHDFEDLSQGPYDSPAVNGQSITDDDNETD
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(1809467..1809693,1810796..1810842,1811382..1811534,1813402..1813496))
location: region:1809467-1813496:-1
so has part: feature:1813402-1813496:-1:exon
so has part: feature:1811382-1811534:-1:exon
so has part: feature:1810796-1810842:-1:exon
so has part: feature:1809467-1809693:-1:exon

XP_032992575.1
type: Protein
SIO_000068: ncbiprotein

position:1809467:-1
position: 1809467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813496:-1
position: 1813496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813402-1813496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1811382-1811534:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810796-1810842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809467-1809693:-1:exon

FKBP8
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: FKBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1814718..1833507
location: region:1814718-1833507:1
so has part: feature:1814718-1833507:1:exon
subclass of: SO_0000010

117039543
type: Gene
SIO_000068: ncbigene

position:1814718:1
position: 1814718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833507:1
position: 1833507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814718-1833507:1:exon

FKBP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: FKBP8
product: FKBP prolyl isomerase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033136695.1
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(1814718..1814740,1819068..1819142,1823708..1824020,1824940..1825109,1826211..1826299,1827094..1827311,1828255..1828427,1828898..1828975,1832560..1832691,1833383..1833507)
location: region:1814718-1833507:1
so has part: feature:1814718-1814740:1:exon
so has part: feature:1819068-1819142:1:exon
so has part: feature:1823708-1824020:1:exon
so has part: feature:1824940-1825109:1:exon
so has part: feature:1826211-1826299:1:exon
so has part: feature:1827094-1827311:1:exon
so has part: feature:1828255-1828427:1:exon
so has part: feature:1828898-1828975:1:exon
so has part: feature:1832560-1832691:1:exon
so has part: feature:1833383-1833507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1814718-1814740:1:exon

position:1814740:1
position: 1814740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1819068-1819142:1:exon

position:1819068:1
position: 1819068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819142:1
position: 1819142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1823708-1824020:1:exon

position:1823708:1
position: 1823708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1824020:1
position: 1824020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1824940-1825109:1:exon

position:1824940:1
position: 1824940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825109:1
position: 1825109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1826211-1826299:1:exon

position:1826211:1
position: 1826211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826299:1
position: 1826299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1827094-1827311:1:exon

position:1827094:1
position: 1827094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827311:1
position: 1827311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1828255-1828427:1:exon

position:1828255:1
position: 1828255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828427:1
position: 1828427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1828898-1828975:1:exon

position:1828898:1
position: 1828898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828975:1
position: 1828975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1832560-1832691:1:exon

position:1832560:1
position: 1832560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832691:1
position: 1832691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1833383-1833507:1:exon

position:1833383:1
position: 1833383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FKBP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: FKBP8
product: FKBP prolyl isomerase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033136694.1
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(1818695..1818775,1819068..1819142,1823708..1824020,1824940..1825109,1826211..1826299,1827094..1827311,1828255..1828427,1828898..1828975,1832560..1832691,1833383..1833507)
location: region:1818695-1833507:1
so has part: feature:1818695-1818775:1:exon
so has part: feature:1819068-1819142:1:exon
so has part: feature:1823708-1824020:1:exon
so has part: feature:1824940-1825109:1:exon
so has part: feature:1826211-1826299:1:exon
so has part: feature:1827094-1827311:1:exon
so has part: feature:1828255-1828427:1:exon
so has part: feature:1828898-1828975:1:exon
so has part: feature:1832560-1832691:1:exon
so has part: feature:1833383-1833507:1:exon

position:1818695:1
position: 1818695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1818695-1818775:1:exon

position:1818775:1
position: 1818775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1819068-1819142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823708-1824020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1824940-1825109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1826211-1826299:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827094-1827311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828255-1828427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828898-1828975:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1832560-1832691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1833383-1833507:1:exon

FKBP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: FKBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP8
translation: MASGGEGLDDISPDWAGASLVDLTSPELAKSNTSTLDSGEDFEVLDNDEEEEEGRDEDLSGLPPLEDVPRNDGQGMAASQPPAPEDAEETPEWVDVLGSGLLKKKVIVAGQGPETRPVKSQDVTVRLKTTLQDGTVVEESPSLTFTLGDFDVIQALDLCVQLMEMGEKALIISDAKYCFGRQGRSPDIPPDSSLELEVELLAAQDAPDLELLSGKEKIELANRKRERGNFHYQRADYVLAINSYDIALKIIGSSSKVDFAQEEEEALVDVKMKCLNNLAASQLKLDHYDAALRSCNQVLEQQPDNIKALFRKGKVLAQQGEYREAIPILKAALKLEPSNKTIHTELSKLAKKHADQKCVESEMYRKMLGNPSSPIAKCKDKSSRSIPWKWLFGATAVALGGVALSVVIAARN
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(1823729..1824020,1824940..1825109,1826211..1826299,1827094..1827311,1828255..1828427,1828898..1828975,1832560..1832691,1833383..1833469)
location: region:1823729-1833469:1
so has part: feature:1823729-1824020:1:exon
so has part: feature:1824940-1825109:1:exon
so has part: feature:1826211-1826299:1:exon
so has part: feature:1827094-1827311:1:exon
so has part: feature:1828255-1828427:1:exon
so has part: feature:1828898-1828975:1:exon
so has part: feature:1832560-1832691:1:exon
so has part: feature:1833383-1833469:1:exon

XP_032992585.1
type: Protein
SIO_000068: ncbiprotein

position:1823729:1
position: 1823729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833469:1
position: 1833469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1823729-1824020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824940-1825109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826211-1826299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827094-1827311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1828255-1828427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1828898-1828975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1832560-1832691:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1833383-1833469:1:exon

FKBP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: FKBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP8
translation: MASGGEGLDDISPDWAGASLVDLTSPELAKSNTSTLDSGEDFEVLDNDEEEEEGRDEDLSGLPPLEDVPRNDGQGMAASQPPAPEDAEETPEWVDVLGSGLLKKKVIVAGQGPETRPVKSQDVTVRLKTTLQDGTVVEESPSLTFTLGDFDVIQALDLCVQLMEMGEKALIISDAKYCFGRQGRSPDIPPDSSLELEVELLAAQDAPDLELLSGKEKIELANRKRERGNFHYQRADYVLAINSYDIALKIIGSSSKVDFAQEEEEALVDVKMKCLNNLAASQLKLDHYDAALRSCNQVLEQQPDNIKALFRKGKVLAQQGEYREAIPILKAALKLEPSNKTIHTELSKLAKKHADQKCVESEMYRKMLGNPSSPIAKCKDKSSRSIPWKWLFGATAVALGGVALSVVIAARN
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(1823729..1824020,1824940..1825109,1826211..1826299,1827094..1827311,1828255..1828427,1828898..1828975,1832560..1832691,1833383..1833469)
location: region:1823729-1833469:1
so has part: feature:1823729-1824020:1:exon
so has part: feature:1824940-1825109:1:exon
so has part: feature:1826211-1826299:1:exon
so has part: feature:1827094-1827311:1:exon
so has part: feature:1828255-1828427:1:exon
so has part: feature:1828898-1828975:1:exon
so has part: feature:1832560-1832691:1:exon
so has part: feature:1833383-1833469:1:exon

XP_032992586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1823729-1824020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824940-1825109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826211-1826299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827094-1827311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1828255-1828427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1828898-1828975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1832560-1832691:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1833383-1833469:1:exon

LOC117039659
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1835831..1837023)
location: region:1835831-1837023:-1
so has part: feature:1835831-1837023:-1:exon
subclass of: SO_0000010

117039659
type: Gene
SIO_000068: ncbigene

position:1835831:-1
position: 1835831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837023:-1
position: 1837023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835831-1837023:-1:exon

LOC117039659
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039659
product: heat shock protein Hsp-16.1/Hsp-16.11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136840.1
SIO_010081: LOC117039659
subclass of: SO_0000673
so part of: LOC117039659
location: complement(1835831..1837023)
location: region:1835831-1837023:-1
so has part: feature:1835831-1837023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1835831-1837023:-1:exon

LOC117039659
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock protein Hsp-16.1/Hsp-16.11-like
translation: MASYSRYLLRMLPLRRWPLHSFGPVWLSGPQSAGEALWPAAGQSLVDRVAADVERQIVEMETMSRAFFQASPLQKFLREASPEESVARDGEAGGKFHFSVDVAGFAPEDVAVRLDGRKLTVTAKRLHENTSEEGGCVRERHEVRRETLLPADVDLQAVTCSLASDGRLCIEAPRLAAAKAIPIDVKAADQQAPGTSTEKEPEKPQDA
SIO_010081: LOC117039659
subclass of: SO_0000673
so part of: LOC117039659
location: complement(1836083..1836706)
location: region:1836083-1836706:-1
so has part: feature:1836083-1836706:-1:exon

XP_032992731.1
type: Protein
SIO_000068: ncbiprotein

position:1836083:-1
position: 1836083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1836706:-1
position: 1836706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1836083-1836706:-1:exon

LOC117039676
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1838914..1839961)
location: region:1838914-1839961:-1
so has part: feature:1838914-1839961:-1:exon
subclass of: SO_0000010

117039676
type: Gene
SIO_000068: ncbigene

position:1838914:-1
position: 1838914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839961:-1
position: 1839961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1838914-1839961:-1:exon

LOC117039676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039676
product: alpha-crystallin A chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136856.1
SIO_010081: LOC117039676
subclass of: SO_0000673
so part of: LOC117039676
location: complement(1838914..1839961)
location: region:1838914-1839961:-1
so has part: feature:1838914-1839961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1838914-1839961:-1:exon

LOC117039676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 80427
gene: LOC117039676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-crystallin A chain-like
translation: MLCRLHLTAPLAAPLLSRALWPPTRSLFEDLEREMDSLWELLGCSNWPLGAHEEASRGPEESPFAVTQDMAGFDPRELVVKLVGQKLVLTGRKATQTPGGPFRYELFRREWDVPGSVDRQQLSCSISREGQLRIEAAGPAARTVPIEVGRAPGSGQETDSTMDGRRTKG
SIO_010081: LOC117039676
subclass of: SO_0000673
so part of: LOC117039676
location: complement(1839210..1839719)
location: region:1839210-1839719:-1
so has part: feature:1839210-1839719:-1:exon

XP_032992747.1
type: Protein
SIO_000068: ncbiprotein

position:1839210:-1
position: 1839210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839719:-1
position: 1839719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839210-1839719:-1:exon

LOC117039687
type: Gene
subclass of: SO_0000704
RO_0002162: 80427
gene: LOC117039687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1953936..2000821
location: region:1953936-2000821:1
so has part: feature:1953936-2000821:1:exon
subclass of: SO_0000010

117039687
type: Gene
SIO_000068: ncbigene

position:1953936:1
position: 1953936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000821:1
position: 2000821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953936-2000821:1:exon

LOC117039687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 80427
gene: LOC117039687
product: mucin-16-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033136867.1
SIO_010081: LOC117039687
subclass of: SO_0000673
so part of: LOC117039687
location: join(1953936..1953975,1954541..1954669,1955235..1955389,1955488..1955555,1955687..1955859,1956452..1956478,1956821..1956975,1957067..1957134,1957257..1957429,1957877..1957903,1958701..1958855,1958953..1959020,1959152..1959324,1960429..1960455,1960576..1960730,1960822..1960889,1961022..1961194,1961800..1961826,1962341..1962495,1962587..1962654,1962787..1962959,1963549..1963575,1964091..1964245,1964337..1964404,1964537..1964709,1965155..1965181,1965523..1965677,1965769..1965836,1965960..1966132,1966600..1966626,1966912..1967066,1967163..1967230,1967365..1967537,1967879..1967905,1968225..1968379,1968476..1968543,1968677..1968901,1969582..1969730,1969817..1969884,1970017..1970189,1970532..1970558,1970899..1971053,1971154..1971221,1971364..1971536,1971879..1971905,1972244..1972398,1972495..1972562,1972696..1972868,1973354..1973380,1973601..1973749,1973836..1973903,1974040..1974212,1974554..1974580,1974919..1975073,1975167..1975234,1975367..1975539,1975882..1975908,1976239..1976393,1976490..1976557,1976690..1976862,1979248..1979274,1979396..1979559,1979783..1979850,1980760..1980932,1981369..1981395,1981530..1981687,1982094..1982161,1982299..1982471,1982795..1982821,1983803..1983948,1984028..1984095,1987917..1988089,1989268..1989294,1990209..1990351,1991612..1991679,1993187..1993359,1994840..1994866,1994955..1995100,1996509..1996576,1997943..1998115,1998992..1999128,2000726..2000821)
location: region:1953936-2000821:1
so has part: feature:1953936-1953975:1:exon
so has part: feature:1954541-1954669:1:exon
so has part: feature:1955235-1955389:1:exon
so has part: feature:1955488-1955555:1:exon
so has part: feature:1955687-1955859:1:exon
so has part: feature:1956452-1956478:1:exon
so has part: feature:1956821-1956975:1:exon
so has part: feature:1957067-1957134:1:exon
so has part: feature:1957257-1957429:1:exon
so has part: feature:1957877-1957903:1:exon
so has part: feature:1958701-1958855:1:exon
so has part: feature:1958953-1959020:1:exon
so has part: feature:1959152-1959324:1:exon
so has part: feature:1960429-1960455:1:exon
so has part: feature:1960576-1960730:1:exon
so has part: feature:1960822-1960889:1:exon
so has part: feature:1961022-1961194:1:exon
so has part: feature:1961800-1961826:1:exon
so has part: feature:1962341-1962495:1:exon
so has part: feature:1962587-1962654:1:exon
so has part: feature:1962787-1962959:1:exon
so has part: feature:1963549-1963575:1:exon
so has part: feature:1964091-1964245:1:exon
so has part: feature:1964337-1964404:1:exon
so has part: feature:1964537-1964709:1:exon
so has part: feature:1965155-1965181:1:exon
so has part: feature:1965523-1965677:1:exon
so has part: feature:1965769-1965836:1:exon
so has part: feature:1965960-1966132:1:exon
so has part: feature:1966600-1966626:1:exon
so has part: feature:1966912-1967066:1:exon
so has part: feature:1967163-1967230:1:exon
so has part: feature:1967365-1967537:1:exon
so has part: feature:1967879-1967905:1:exon
so has part: feature:1968225-1968379:1:exon
so has part: feature:1968476-1968543:1:exon
so has part: feature:1968677-1968901:1:exon
so has part: feature:1969582-1969730:1:exon
so has part: feature:1969817-1969884:1:exon
so has part: feature:1970017-1970189:1:exon
so has part: feature:1970532-1970558:1:exon
so has part: feature:1970899-1971053:1:exon
so has part: feature:1971154-1971221:1:exon
so has part: feature:1971364-1971536:1:exon
so has part: feature:1971879-1971905:1:exon
so has part: feature:1972244-1972398:1:exon
so has part: feature:1972495-1972562:1:exon
so has part: feature:1972696-1972868:1:exon
so has part: feature:1973354-1973380:1:exon
so has part: feature:1973601-1973749:1:exon
so has part: feature:1973836-1973903:1:exon
so has part: feature:1974040-1974212:1:exon
so has part: feature:1974554-1974580:1:exon
so has part: feature:1974919-1975073:1:exon
so has part: feature:1975167-1975234:1:exon
so has part: feature:1975367-1975539:1:exon
so has part: feature:1975882-1975908:1:exon
so has part: feature:1976239-1976393:1:exon
so has part: feature:1976490-1976557:1:exon
so has part: feature:1976690-1976862:1:exon
so has part: feature:1979248-1979274:1:exon
so has part: feature:1979396-1979559:1:exon
so has part: feature:1979783-1979850:1:exon
so has part: feature:1980760-1980932:1:exon
so has part: feature:1981369-1981395:1:exon
so has part: feature:1981530-1981687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1953936-1953975:1:exon

position:1953975:1
position: 1953975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1954541-1954669:1:exon

position:1954541:1
position: 1954541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1954669:1
position: 1954669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1955235-1955389:1:exon

position:1955235:1
position: 1955235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955389:1
position: 1955389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1955488-1955555:1:exon

position:1955488:1
position: 1955488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955555:1
position: 1955555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1955687-1955859:1:exon

position:1955687:1
position: 1955687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955859:1
position: 1955859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1956452-1956478:1:exon

position:1956452:1
position: 1956452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1956478:1
position: 1956478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1956821-1956975:1:exon

position:1956821:1
position: 1956821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1956975:1
position: 1956975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1957067-1957134:1:exon

position:1957067:1
position: 1957067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1957134:1
position: 1957134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1957257-1957429:1:exon

position:1957257:1
position: 1957257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1957429:1
position: 1957429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1957877-1957903:1:exon

position:1957877:1
position: 1957877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1957903:1
position: 1957903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1958701-1958855:1:exon

position:1958701:1
position: 1958701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1958855:1
position: 1958855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1958953-1959020:1:exon

position:1958953:1
position: 1958953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959020:1
position: 1959020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1959152-1959324:1:exon

position:1959152:1
position: 1959152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959324:1
position: 1959324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1960429-1960455:1:exon

position:1960429:1
position: 1960429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960455:1
position: 1960455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1960576-1960730:1:exon

position:1960576:1
position: 1960576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition