Salvelinus namaycush isolate Seneca chromosome 15, SaNama_1.0, whole genome shotgun sequence.
type: Entry
definition: Salvelinus namaycush isolate Seneca chromosome 15, SaNama_1.0, whole genome shotgun sequence.
sequence version: NC_052321.1
sequence date: 2021-01-13
sequence: sequence
division: CON
label: NC_052321.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA690826
dblink: SAMN16985724
keyword: WGS
keyword: RefSeq
source: Salvelinus namaycush (lake trout)
organism: Salvelinus namaycush
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM028256.1.\nAssembly name: SaNama_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Universite Laval on\n2021/01/06. The original whole-genome shotgun project has the\naccession JAEAGN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Universite Laval\nAssembly Date :: 12-NOV-2020\nAssembly Method :: FALCON v. smrtlink-release_6.0.0.47841;\n Arrow v. smrtlink-release_6.0.0.47841;\n Pilon v. 1.23; Salsa v. 2.2; Chromonomer\n v. 1.13; PBSuite (PBJelly) v. 15.8.24;\n MaSuRCA (POLCA) v. 3.4.2\nAssembly Name :: SaNama_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 89.0x\nSequencing Technology :: PacBio Sequel; Illumina HiSeq; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Salvelinus namaycush Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 41983602
topology: linear
so has quality: SO_0000987
location: 1..41983602
location: region:1-41983602:1
RO_0002162: 8040

NC_052321
type: RefSeq
SIO_000068: refseq

PRJNA690826
type: BioProject
SIO_000068: bioproject

SAMN16985724
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41983602:1
position: 41983602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-41983602:1:source
so part of: sequence
organism: Salvelinus namaycush
mol type: genomic DNA
isolate: Seneca
chromosome: 15
sex: female
tissue type: white muscle

8040
type: Taxonomy
SIO_000068: taxonomy

LOC120059712
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(258383..297624)
location: region:258383-297624:-1
so has part: feature:258383-297624:-1:exon
subclass of: SO_0000010

120059712
type: Gene
SIO_000068: ncbigene

position:258383:-1
position: 258383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297624:-1
position: 297624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258383-297624:-1:exon

LOC120059712
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059712
product: presenilin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008766.1
SIO_010081: LOC120059712
subclass of: SO_0000673
so part of: LOC120059712
location: complement(join(258383..260473,261722..261840,266246..266422,266801..266905,276028..276126,282857..283077,283231..283298,284346..284487,286198..286487,296980..297624))
location: region:258383-297624:-1
so has part: feature:296980-297624:-1:exon
so has part: feature:286198-286487:-1:exon
so has part: feature:284346-284487:-1:exon
so has part: feature:283231-283298:-1:exon
so has part: feature:282857-283077:-1:exon
so has part: feature:276028-276126:-1:exon
so has part: feature:266801-266905:-1:exon
so has part: feature:266246-266422:-1:exon
so has part: feature:261722-261840:-1:exon
so has part: feature:258383-260473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296980-297624:-1:exon

position:296980:-1
position: 296980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286198-286487:-1:exon

position:286198:-1
position: 286198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286487:-1
position: 286487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284346-284487:-1:exon

position:284346:-1
position: 284346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284487:-1
position: 284487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283231-283298:-1:exon

position:283231:-1
position: 283231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283298:-1
position: 283298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:282857-283077:-1:exon

position:282857:-1
position: 282857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283077:-1
position: 283077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276028-276126:-1:exon

position:276028:-1
position: 276028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276126:-1
position: 276126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:266801-266905:-1:exon

position:266801:-1
position: 266801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266905:-1
position: 266905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:266246-266422:-1:exon

position:266246:-1
position: 266246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266422:-1
position: 266422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:261722-261840:-1:exon

position:261722:-1
position: 261722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261840:-1
position: 261840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:258383-260473:-1:exon

position:260473:-1
position: 260473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059712
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: presenilin-1-like
translation: MGECCVRPVTPQAGVNGRVLRKAVILRLVSMGECCVRPSLLRLVSMGECCVRPVTPQAGVNGRVLLKAVTPQAGVNGRVLRSRSLLRLESMGECCVRPVTPQAVSMGECCVKRSLLRLVSMGECCVRPVTPQLESMGECCVRPVTPQAGVNGRVLRKAVTPQAGVNGRVLRNAVTPQAGVNGKCCVGRSLLRLVSMGECCVGRSLLRLVSMGECCATEAPVPTQNQHPEPGVTGVRSRGGGGGPGAEQNGQAPPQRPPQVVESEEDEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQNDGQRLIYTPFPEDTDTIGQRALNSVLNATIMISVIIVMTMVLVLLYKYRCYRVIQGWLFLSSLLLLFFFSFIYLKEVFKTYNVAMDWITLAVIVWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADTGLGHRPMTRKNSTEAPITQVESQSLALGPAPLSPPEDDGGFTPNWMGHQEHQLGPLQSTDETRREIQQLPSARPVMDDDDEERGVKLGLGDFIFYSMLVGKASAAASGDWNTTLASFVAILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDQLALHQFYI
SIO_010081: LOC120059712
subclass of: SO_0000673
so part of: LOC120059712
location: complement(join(260318..260473,261722..261840,266246..266422,266801..266905,276028..276126,282857..283077,283231..283298,284346..284487,286198..286487,296980..297624))
location: region:260318-297624:-1
so has part: feature:296980-297624:-1:exon
so has part: feature:286198-286487:-1:exon
so has part: feature:284346-284487:-1:exon
so has part: feature:283231-283298:-1:exon
so has part: feature:282857-283077:-1:exon
so has part: feature:276028-276126:-1:exon
so has part: feature:266801-266905:-1:exon
so has part: feature:266246-266422:-1:exon
so has part: feature:261722-261840:-1:exon
so has part: feature:260318-260473:-1:exon

XP_038864694.1
type: Protein
SIO_000068: ncbiprotein

position:260318:-1
position: 260318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296980-297624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286198-286487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284346-284487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283231-283298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282857-283077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276028-276126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:266801-266905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:266246-266422:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261722-261840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260318-260473:-1:exon

LOC120060091
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(323218..449907)
location: region:323218-449907:-1
so has part: feature:323218-449907:-1:exon
subclass of: SO_0000010

120060091
type: Gene
SIO_000068: ncbigene

position:323218:-1
position: 323218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449907:-1
position: 449907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323218-449907:-1:exon

LOC120060091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060091
product: protein quaking-A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039009156.1
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(323218..327062,329985..330059,332654..332932,334465..334552,362562..362705,370665..370781,408310..408452,449491..449907))
location: region:323218-449907:-1
so has part: feature:449491-449907:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332654-332932:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:323218-327062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449907:-1:exon

position:449491:-1
position: 449491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

position:408310:-1
position: 408310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408452:-1
position: 408452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

position:370665:-1
position: 370665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370781:-1
position: 370781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

position:362562:-1
position: 362562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362705:-1
position: 362705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

position:334465:-1
position: 334465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334552:-1
position: 334552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332654-332932:-1:exon

position:332654:-1
position: 332654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332932:-1
position: 332932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

position:329985:-1
position: 329985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330059:-1
position: 330059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323218-327062:-1:exon

position:327062:-1
position: 327062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120060091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060091
product: protein quaking-A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_039009153.1
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(323218..327062,329985..330059,332537..332932,334465..334552,362562..362705,370665..370781,408310..408452,449491..449907))
location: region:323218-449907:-1
so has part: feature:449491-449907:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332537-332932:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:323218-327062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332537-332932:-1:exon

position:332537:-1
position: 332537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323218-327062:-1:exon

LOC120060091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060091
product: protein quaking-A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039009154.1
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(323218..327062,329985..330059,332654..332956,334465..334552,362562..362705,370665..370781,408310..408452,449491..449907))
location: region:323218-449907:-1
so has part: feature:449491-449907:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332654-332956:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:323218-327062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332654-332956:-1:exon

position:332956:-1
position: 332956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323218-327062:-1:exon

LOC120060091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060091
product: protein quaking-A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039009152.1
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(323218..327062,329985..330059,332537..332956,334465..334552,362562..362705,370665..370781,408310..408452,449491..449907))
location: region:323218-449907:-1
so has part: feature:449491-449907:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332537-332956:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:323218-327062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332537-332956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323218-327062:-1:exon

LOC120060091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-A isoform X4
translation: MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLDRLLDEEINRVRKDMYNDTANGPVDKHPLELPEALGPIIHLQEKLFVPLKEHPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDRKKEEQNRGKPNWEHLNEELHVLITVEDTQKRSEIKMKRALEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDTNIKTPAAAAAQGPRLMQAPQGQLMAPHQQMRPPTPAGPPIMNIIRQPQMQGMLPNGTPTLVPPSPEGGILYASPYDYPYALAPTSLLEYPIDHNGVLGAMATKMRRHDSRVHPYQRIVTADRAATGN
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(327046..327062,329985..330059,332654..332932,334465..334552,362562..362705,370665..370781,408310..408452,449491..449635))
location: region:327046-449635:-1
so has part: feature:449491-449635:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332654-332932:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:327046-327062:-1:exon

XP_038865084.1
type: Protein
SIO_000068: ncbiprotein

position:327046:-1
position: 327046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449635:-1
position: 449635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332654-332932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327046-327062:-1:exon

LOC120060091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-A isoform X2
translation: MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLDRLLDEEINRVRKDMYNDTANGPVDKHPLELPEALGPIIHLQEKLFVPLKEHPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDRKKEEQNRGKPNWEHLNEELHVLITVEDTQKRSEIKMKRALEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDTNIKTPAAAAAQGPRLMQAPQGQLMAPHQQMRPPTPAGPPIMNIIRQPQMQGMLPNGTPTLVPPSPEGGILYASPYDYPYALAPTSLLEYPIDHNGVLGKRPWGLGGGPFSPGQEGSLFYPGFLDAASMSHGQDLLKGAMATKMRRHDSRVHPYQRIVTADRAATGN
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(327046..327062,329985..330059,332537..332932,334465..334552,362562..362705,370665..370781,408310..408452,449491..449635))
location: region:327046-449635:-1
so has part: feature:449491-449635:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332537-332932:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:327046-327062:-1:exon

XP_038865081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332537-332932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327046-327062:-1:exon

LOC120060091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-A isoform X3
translation: MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLDRLLDEEINRVRKDMYNDTANGPVDKHPLELPEALGPIIHLQEKLFVPLKEHPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDRKKEEQNRGKPNWEHLNEELHVLITVEDTQKRSEIKMKRALEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDTNIKTHSLAFSLAAAAAAAQGPRLMQAPQGQLMAPHQQMRPPTPAGPPIMNIIRQPQMQGMLPNGTPTLVPPSPEGGILYASPYDYPYALAPTSLLEYPIDHNGVLGAMATKMRRHDSRVHPYQRIVTADRAATGN
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(327046..327062,329985..330059,332654..332956,334465..334552,362562..362705,370665..370781,408310..408452,449491..449635))
location: region:327046-449635:-1
so has part: feature:449491-449635:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332654-332956:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:327046-327062:-1:exon

XP_038865082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332654-332956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327046-327062:-1:exon

LOC120060091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-A isoform X1
translation: MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLDRLLDEEINRVRKDMYNDTANGPVDKHPLELPEALGPIIHLQEKLFVPLKEHPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDRKKEEQNRGKPNWEHLNEELHVLITVEDTQKRSEIKMKRALEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDTNIKTHSLAFSLAAAAAAAQGPRLMQAPQGQLMAPHQQMRPPTPAGPPIMNIIRQPQMQGMLPNGTPTLVPPSPEGGILYASPYDYPYALAPTSLLEYPIDHNGVLGKRPWGLGGGPFSPGQEGSLFYPGFLDAASMSHGQDLLKGAMATKMRRHDSRVHPYQRIVTADRAATGN
SIO_010081: LOC120060091
subclass of: SO_0000673
so part of: LOC120060091
location: complement(join(327046..327062,329985..330059,332537..332956,334465..334552,362562..362705,370665..370781,408310..408452,449491..449635))
location: region:327046-449635:-1
so has part: feature:449491-449635:-1:exon
so has part: feature:408310-408452:-1:exon
so has part: feature:370665-370781:-1:exon
so has part: feature:362562-362705:-1:exon
so has part: feature:334465-334552:-1:exon
so has part: feature:332537-332956:-1:exon
so has part: feature:329985-330059:-1:exon
so has part: feature:327046-327062:-1:exon

XP_038865080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449491-449635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408310-408452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370665-370781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362562-362705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334465-334552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332537-332956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329985-330059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327046-327062:-1:exon

LOC120059713
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 575374..609940
location: region:575374-609940:1
so has part: feature:575374-609940:1:exon
subclass of: SO_0000010

120059713
type: Gene
SIO_000068: ncbigene

position:575374:1
position: 575374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609940:1
position: 609940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575374-609940:1:exon

LOC120059713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059713
product: ena/VASP-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008767.1
SIO_010081: LOC120059713
subclass of: SO_0000673
so part of: LOC120059713
location: join(575374..575547,579132..579309,592241..592298,602084..602154,605810..606063,606340..606443,606725..606752,606976..607006,607133..607193,608896..608953,609055..609112,609597..609940)
location: region:575374-609940:1
so has part: feature:575374-575547:1:exon
so has part: feature:579132-579309:1:exon
so has part: feature:592241-592298:1:exon
so has part: feature:602084-602154:1:exon
so has part: feature:605810-606063:1:exon
so has part: feature:606340-606443:1:exon
so has part: feature:606725-606752:1:exon
so has part: feature:606976-607006:1:exon
so has part: feature:607133-607193:1:exon
so has part: feature:608896-608953:1:exon
so has part: feature:609055-609112:1:exon
so has part: feature:609597-609940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575374-575547:1:exon

position:575547:1
position: 575547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579132-579309:1:exon

position:579132:1
position: 579132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579309:1
position: 579309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592241-592298:1:exon

position:592241:1
position: 592241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592298:1
position: 592298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602084-602154:1:exon

position:602084:1
position: 602084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602154:1
position: 602154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:605810-606063:1:exon

position:605810:1
position: 605810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606063:1
position: 606063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:606340-606443:1:exon

position:606340:1
position: 606340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606443:1
position: 606443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:606725-606752:1:exon

position:606725:1
position: 606725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606752:1
position: 606752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:606976-607006:1:exon

position:606976:1
position: 606976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607006:1
position: 607006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:607133-607193:1:exon

position:607133:1
position: 607133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607193:1
position: 607193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:608896-608953:1:exon

position:608896:1
position: 608896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608953:1
position: 608953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:609055-609112:1:exon

position:609055:1
position: 609055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609112:1
position: 609112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:609597-609940:1:exon

position:609597:1
position: 609597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120059713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ena/VASP-like protein
translation: MVYDDTSKKWVPIKPGQQGFSRINIYHNTANNTFRVVGVKLQDQQVVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSTAMMFALNTLSSQDGGPAVQRQNGPSSEDPDVQRRQMMEPHQMQGVAHKERERRTSGSGPVSLPAMLAVAPPVAPPAPMAPMAPPPPPGPPPPATVPPPMPPPLPVGGGHGGPHLEGAGNELAQPLSGLAAALAGAKLRKVARDENSPPGTGVAKNDGNRSSGGEGLMQEMNALLARRRKASEKPEEEDPKPGQNSTDAGKNPWDRANSVDKTSLVSRVRPVGSTSEGELDFDRMKQEILDEVVRELQKVKDEIINAIRQEIGRIHTC
SIO_010081: LOC120059713
subclass of: SO_0000673
so part of: LOC120059713
location: join(575413..575547,579132..579309,592241..592298,602084..602154,605810..606063,606340..606443,606725..606752,606976..607006,607133..607193,608896..608953,609055..609112,609597..609634)
location: region:575413-609634:1
so has part: feature:575413-575547:1:exon
so has part: feature:579132-579309:1:exon
so has part: feature:592241-592298:1:exon
so has part: feature:602084-602154:1:exon
so has part: feature:605810-606063:1:exon
so has part: feature:606340-606443:1:exon
so has part: feature:606725-606752:1:exon
so has part: feature:606976-607006:1:exon
so has part: feature:607133-607193:1:exon
so has part: feature:608896-608953:1:exon
so has part: feature:609055-609112:1:exon
so has part: feature:609597-609634:1:exon

XP_038864695.1
type: Protein
SIO_000068: ncbiprotein

position:575413:1
position: 575413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609634:1
position: 609634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575413-575547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579132-579309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592241-592298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602084-602154:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605810-606063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606340-606443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606725-606752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:606976-607006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607133-607193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608896-608953:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609055-609112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:609597-609634:1:exon

degs2
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: degs2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(612217..623225)
location: region:612217-623225:-1
so has part: feature:612217-623225:-1:exon
subclass of: SO_0000010

120059789
type: Gene
SIO_000068: ncbigene

position:612217:-1
position: 612217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623225:-1
position: 623225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612217-623225:-1:exon

degs2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: degs2
product: delta(4)-desaturase, sphingolipid 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008838.1
SIO_010081: degs2
subclass of: SO_0000673
so part of: degs2
location: complement(join(612217..612360,613222..613964,623144..623225))
location: region:612217-623225:-1
so has part: feature:623144-623225:-1:exon
so has part: feature:613222-613964:-1:exon
so has part: feature:612217-612360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623144-623225:-1:exon

position:623144:-1
position: 623144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613222-613964:-1:exon

position:613222:-1
position: 613222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613964:-1
position: 613964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:612217-612360:-1:exon

position:612360:-1
position: 612360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

degs2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: degs2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingolipid delta(4)-desaturase/C4-monooxygenase DES2
translation: MDKTGERGDFEWVYSDQPHTSRRKEILAKYPEIKSLMGPDPQLKWVVTGMVLTQLLACYMVHDLPWKWVVFWSYGFGGCINHSLTLAIHDISHNVAFGNKLARLNRWFAIWANLPIGLPYSASFKKYHIDHHRYLGGDGLDVDIPTDVEGWFFCTPLRKVLWLFLQPLFYALRPLVVNPKPVSRLEMMNAAVQFAVNFVIFYLWGLKPIVYLIAGSILCMGLHPISGHFIAEHYMFLKGHETYSYYGPLNWITFNVGYHMEHHDFPSIPGSKLPQVKKMAAEYYDSLPQHTSWIRVLWDFVFDDSIGPYTRIKREYKLVKQE
SIO_010081: degs2
subclass of: SO_0000673
so part of: degs2
location: complement(join(612217..612360,613222..613964,623144..623225))
location: region:612217-623225:-1
so has part: feature:623144-623225:-1:exon
so has part: feature:613222-613964:-1:exon
so has part: feature:612217-612360:-1:exon

XP_038864766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623144-623225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:613222-613964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:612217-612360:-1:exon

LOC120060092
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 624707..630823
location: region:624707-630823:1
so has part: feature:624707-630823:1:exon
subclass of: SO_0000010

120060092
type: Gene
SIO_000068: ncbigene

position:624707:1
position: 624707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630823:1
position: 630823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624707-630823:1:exon

LOC120060092
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060092
product: transcriptional repressor protein YY1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009157.1
SIO_010081: LOC120060092
subclass of: SO_0000673
so part of: LOC120060092
location: join(624707..625338,626439..626601,628416..628476,629060..629218,629406..630823)
location: region:624707-630823:1
so has part: feature:624707-625338:1:exon
so has part: feature:626439-626601:1:exon
so has part: feature:628416-628476:1:exon
so has part: feature:629060-629218:1:exon
so has part: feature:629406-630823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624707-625338:1:exon

position:625338:1
position: 625338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626439-626601:1:exon

position:626439:1
position: 626439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626601:1
position: 626601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:628416-628476:1:exon

position:628416:1
position: 628416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628476:1
position: 628476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:629060-629218:1:exon

position:629060:1
position: 629060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629218:1
position: 629218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:629406-630823:1:exon

position:629406:1
position: 629406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor protein YY1-like
translation: MASGDTLYIETDGSEMPSEIVELHEIEVETIETTVVGEDDDEQPMIALQPLDSDDPHSMHHHHQEVILVQTREEVVGEDDSDMHGDDDYEDQILIPVPVPAAEEEYIEQTLVTVAGKSSGRTKKGGSGKRNKKNYLGAPESSGRKWEQKQVQIKTLEGEFSVTMWASDDKKDVDHDTMVEEHVIGDNSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKVKEDDSPRTIACPHKGCSKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
SIO_010081: LOC120060092
subclass of: SO_0000673
so part of: LOC120060092
location: join(624837..625338,626439..626601,628416..628476,629060..629218,629406..629588)
location: region:624837-629588:1
so has part: feature:624837-625338:1:exon
so has part: feature:626439-626601:1:exon
so has part: feature:628416-628476:1:exon
so has part: feature:629060-629218:1:exon
so has part: feature:629406-629588:1:exon

XP_038865085.1
type: Protein
SIO_000068: ncbiprotein

position:624837:1
position: 624837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629588:1
position: 629588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624837-625338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626439-626601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628416-628476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629060-629218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629406-629588:1:exon

mis18bp1
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: mis18bp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(636383..656336)
location: region:636383-656336:-1
so has part: feature:636383-656336:-1:exon
subclass of: SO_0000010

120060093
type: Gene
SIO_000068: ncbigene

position:636383:-1
position: 636383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656336:-1
position: 656336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636383-656336:-1:exon

mis18bp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: mis18bp1
product: MIS18 binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039009158.1
SIO_010081: mis18bp1
subclass of: SO_0000673
so part of: mis18bp1
location: complement(join(636383..636838,636947..636995,637453..637540,638785..638930,640905..641044,641502..641674,641941..642982,643103..643181,643761..643927,644088..644197,646167..646257,653898..654022,654131..654204,654407..654696,654818..654952,655067..655925,656293..656336))
location: region:636383-656336:-1
so has part: feature:656293-656336:-1:exon
so has part: feature:655067-655925:-1:exon
so has part: feature:654818-654952:-1:exon
so has part: feature:654407-654696:-1:exon
so has part: feature:654131-654204:-1:exon
so has part: feature:653898-654022:-1:exon
so has part: feature:646167-646257:-1:exon
so has part: feature:644088-644197:-1:exon
so has part: feature:643761-643927:-1:exon
so has part: feature:643103-643181:-1:exon
so has part: feature:641941-642982:-1:exon
so has part: feature:641502-641674:-1:exon
so has part: feature:640905-641044:-1:exon
so has part: feature:638785-638930:-1:exon
so has part: feature:637453-637540:-1:exon
so has part: feature:636947-636995:-1:exon
so has part: feature:636383-636838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656293-656336:-1:exon

position:656293:-1
position: 656293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655067-655925:-1:exon

position:655067:-1
position: 655067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655925:-1
position: 655925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654818-654952:-1:exon

position:654818:-1
position: 654818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654952:-1
position: 654952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:654407-654696:-1:exon

position:654407:-1
position: 654407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654696:-1
position: 654696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654131-654204:-1:exon

position:654131:-1
position: 654131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654204:-1
position: 654204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:653898-654022:-1:exon

position:653898:-1
position: 653898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654022:-1
position: 654022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:646167-646257:-1:exon

position:646167:-1
position: 646167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646257:-1
position: 646257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:644088-644197:-1:exon

position:644088:-1
position: 644088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644197:-1
position: 644197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:643761-643927:-1:exon

position:643761:-1
position: 643761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643927:-1
position: 643927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:643103-643181:-1:exon

position:643103:-1
position: 643103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643181:-1
position: 643181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:641941-642982:-1:exon

position:641941:-1
position: 641941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642982:-1
position: 642982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:641502-641674:-1:exon

position:641502:-1
position: 641502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641674:-1
position: 641674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:640905-641044:-1:exon

position:640905:-1
position: 640905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641044:-1
position: 641044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:638785-638930:-1:exon

position:638785:-1
position: 638785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638930:-1
position: 638930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:637453-637540:-1:exon

position:637453:-1
position: 637453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637540:-1
position: 637540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:636947-636995:-1:exon

position:636947:-1
position: 636947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636995:-1
position: 636995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:636383-636838:-1:exon

position:636838:-1
position: 636838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mis18bp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: mis18bp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mis18-binding protein 1
translation: MVKNMFTPSRHNREATYFHEEDPVGRDRIIFPALKAFGTSELISREPVESPAKVFARMKARVQAEIIPVENEKTKTPNPVREKHVREKRIQEEHGGVISSPRKRHQHWVNYEQKETEDLEFTYEAEALTLSPFQSPSKGLTHSHFMVHPQDLQRQSPLKDMGSSAFKPTNINAQKQGPALDAFSTKSQRKALSYPHTLLSSNDTQQPAPLKDFKHASQTTNITTPVKRLNSMEKLEFGAHNIVHDESVLRSEVVLDRLPCLDSRAKTFALLKERRLKRDQQDGYQVSSLQDPMKGCERSVSTPAQPAGGTGEDTSVNVTCSVPTGLSETSIPSRPDAGLSQCEVYRDKPPPRPFPDLVHDPLLQVSPKISIPKKQEAVFQAKHIAESTGSNVTGIHLRHWLLKSRNDMFYVDGVREDNKMPWHSNLIAKRISTKHLKTTSGNIYVLVGKMTPDFSGTELPKWLLNKFLFGFPKDWKKYLERFLSEPKGSEGKKGSKGLITPRNQNHLSTKTQDNTSQKPNATKRPTRCSATGAVSSANVSRSGRLIKTPLEYWKGARVILDCDMNVTIHAGYDNSSMLYSQVSTPVARVLLDGSPKPAKVFLPPTKERLRGDTSEEETMPLRKVKAYHRPSRSKPEESSPHRALESRWCKAEDNALSRVPKRPKKASPEPHKSMSLEKPSHRNRGRPKKASPNSQWSKPENPSTKGAGRPKRVSPASQRSKSEVILSPKLQGWPRKTGQRSWSATAPATYADRAPQSPTPPHRYLQGANKQRNDDSDNANTSSELLPGKQVKRSEKVDPPRVLDFPKTRVHRQMLPAKIRDDIVMARKDTGKPAPTKTNPQRLTRNRNAQYNGHSTAGESQSDDDFTQKIKPKAVKTGPIKPRRTMTRGRVPEDSQTASGGSSTSQDDCERKLSKRDGPRTLRGKGSKFLRVQQREKEENGDQWTEAELLRLHEAVTSLPKHSSDFWVNVAMEVGSRSAEDCQKQYNVQAPTFLAPSKATKKREVLQKREPLVEPPRITARKGTLKRKQQVRNLLDHMPKDDHDDIFNSSPMQNKRVKLPTVSPNGKEDVFMDSEHDPQTPSSSRFPSMKTPQCLHITPGMMGSVNRDNDDKYIYQLQKRMKKGQAKLCKLGAASKYTPTPSAKRVLKRCNTAENDSFVVWEMFPDKEDHSVESGEEEDYYFMDDD
SIO_010081: mis18bp1
subclass of: SO_0000673
so part of: mis18bp1
location: complement(join(636735..636838,636947..636995,637453..637540,638785..638930,640905..641044,641502..641674,641941..642982,643103..643181,643761..643927,644088..644197,646167..646257,653898..654022,654131..654204,654407..654696,654818..654952,655067..655814))
location: region:636735-655814:-1
so has part: feature:655067-655814:-1:exon
so has part: feature:654818-654952:-1:exon
so has part: feature:654407-654696:-1:exon
so has part: feature:654131-654204:-1:exon
so has part: feature:653898-654022:-1:exon
so has part: feature:646167-646257:-1:exon
so has part: feature:644088-644197:-1:exon
so has part: feature:643761-643927:-1:exon
so has part: feature:643103-643181:-1:exon
so has part: feature:641941-642982:-1:exon
so has part: feature:641502-641674:-1:exon
so has part: feature:640905-641044:-1:exon
so has part: feature:638785-638930:-1:exon
so has part: feature:637453-637540:-1:exon
so has part: feature:636947-636995:-1:exon
so has part: feature:636735-636838:-1:exon

XP_038865086.1
type: Protein
SIO_000068: ncbiprotein

position:636735:-1
position: 636735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655814:-1
position: 655814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655067-655814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654818-654952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654407-654696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654131-654204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653898-654022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646167-646257:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644088-644197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643761-643927:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:643103-643181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:641941-642982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641502-641674:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:640905-641044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638785-638930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:637453-637540:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:636947-636995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:636735-636838:-1:exon

im:7136021
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: im:7136021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 656377..660146
location: region:656377-660146:1
so has part: feature:656377-660146:1:exon
subclass of: SO_0000010

120059790
type: Gene
SIO_000068: ncbigene

position:656377:1
position: 656377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660146:1
position: 660146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656377-660146:1:exon

im:7136021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: im:7136021
product: uncharacterized im:7136021
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039008839.1
SIO_010081: im:7136021
subclass of: SO_0000673
so part of: im:7136021
location: join(656377..657204,657484..657690,659019..659229,659413..660146)
location: region:656377-660146:1
so has part: feature:656377-657204:1:exon
so has part: feature:657484-657690:1:exon
so has part: feature:659019-659229:1:exon
so has part: feature:659413-660146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656377-657204:1:exon

position:657204:1
position: 657204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657484-657690:1:exon

position:657484:1
position: 657484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657690:1
position: 657690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:659019-659229:1:exon

position:659019:1
position: 659019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659229:1
position: 659229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:659413-660146:1:exon

position:659413:1
position: 659413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

im:7136021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: im:7136021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein im:7136021
translation: MAFRTVGDAQLPSEVWVHVFGYLSTTDKLNIRSCCKYFKKMVDHWSLWKGNTVVLKKLCAYTSQFWTTLRRRKISSVVVQKASLKEWKQLALSLPWLTTIAVEHCFDVKAFEILKQFHNLKRLAIRRCRYGQGLSDAIVPLQQVTHFSVCEMHCAPRSDIISAVSKLSHLTSLLYHEGNHPIPRQIFHLMLNRLPHLKHLSLKMGTQHGSLPDDYFNISKTNGFPEDPQVGQPGLTSLELLDYMDPTLPEEALKCLPSLQSLAVDYRDRDVDPSRCHLKTWLRELPQLAILNIAKGHPVSAYAHSIPNTVTSLTLQQVMVEQMDMKALGKQASGLLYLHFDPCSYNSSIGEITKLFPQLMTLKMRHYNVPEREFLSLQQLKHLEQLEILDAHSLSPHLLQLIRKLQVLTNHRTQIIHSLGPRDPTTCYCTHY
SIO_010081: im:7136021
subclass of: SO_0000673
so part of: im:7136021
location: join(656529..657204,657484..657690,659019..659229,659413..659617)
location: region:656529-659617:1
so has part: feature:656529-657204:1:exon
so has part: feature:657484-657690:1:exon
so has part: feature:659019-659229:1:exon
so has part: feature:659413-659617:1:exon

XP_038864767.1
type: Protein
SIO_000068: ncbiprotein

position:656529:1
position: 656529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659617:1
position: 659617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656529-657204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657484-657690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:659019-659229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659413-659617:1:exon

mdga2a
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: mdga2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(673015..872810)
location: region:673015-872810:-1
so has part: feature:673015-872810:-1:exon
subclass of: SO_0000010

120059714
type: Gene
SIO_000068: ncbigene

position:673015:-1
position: 673015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872810:-1
position: 872810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673015-872810:-1:exon

mdga2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: mdga2a
product: MAM domain containing glycosylphosphatidylinositol anchor 2a
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008768.1
SIO_010081: mdga2a
subclass of: SO_0000673
so part of: mdga2a
location: complement(join(673015..673361,674204..674818,700030..700129,700603..700733,705810..705974,713456..713611,720772..720792,727660..727837,745398..745546,755012..755281,798861..799153,801781..802110,817914..818183,822197..822329,835130..835326,839543..839717,855355..855494,872627..872810))
location: region:673015-872810:-1
so has part: feature:872627-872810:-1:exon
so has part: feature:855355-855494:-1:exon
so has part: feature:839543-839717:-1:exon
so has part: feature:835130-835326:-1:exon
so has part: feature:822197-822329:-1:exon
so has part: feature:817914-818183:-1:exon
so has part: feature:801781-802110:-1:exon
so has part: feature:798861-799153:-1:exon
so has part: feature:755012-755281:-1:exon
so has part: feature:745398-745546:-1:exon
so has part: feature:727660-727837:-1:exon
so has part: feature:720772-720792:-1:exon
so has part: feature:713456-713611:-1:exon
so has part: feature:705810-705974:-1:exon
so has part: feature:700603-700733:-1:exon
so has part: feature:700030-700129:-1:exon
so has part: feature:674204-674818:-1:exon
so has part: feature:673015-673361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:872627-872810:-1:exon

position:872627:-1
position: 872627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:855355-855494:-1:exon

position:855355:-1
position: 855355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855494:-1
position: 855494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839543-839717:-1:exon

position:839543:-1
position: 839543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839717:-1
position: 839717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835130-835326:-1:exon

position:835130:-1
position: 835130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835326:-1
position: 835326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822197-822329:-1:exon

position:822197:-1
position: 822197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822329:-1
position: 822329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:817914-818183:-1:exon

position:817914:-1
position: 817914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818183:-1
position: 818183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801781-802110:-1:exon

position:801781:-1
position: 801781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802110:-1
position: 802110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:798861-799153:-1:exon

position:798861:-1
position: 798861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799153:-1
position: 799153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:755012-755281:-1:exon

position:755012:-1
position: 755012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755281:-1
position: 755281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:745398-745546:-1:exon

position:745398:-1
position: 745398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745546:-1
position: 745546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:727660-727837:-1:exon

position:727660:-1
position: 727660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727837:-1
position: 727837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:720772-720792:-1:exon

position:720772:-1
position: 720772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720792:-1
position: 720792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:713456-713611:-1:exon

position:713456:-1
position: 713456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713611:-1
position: 713611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:705810-705974:-1:exon

position:705810:-1
position: 705810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705974:-1
position: 705974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:700603-700733:-1:exon

position:700603:-1
position: 700603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700733:-1
position: 700733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:700030-700129:-1:exon

position:700030:-1
position: 700030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700129:-1
position: 700129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:674204-674818:-1:exon

position:674204:-1
position: 674204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674818:-1
position: 674818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:673015-673361:-1:exon

position:673361:-1
position: 673361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mdga2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: mdga2a
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: MAM domain-containing glycosylphosphatidylinositol anchor protein 2
translation: MRLRDCLSQRLPLPVTACRVQLYLLIIFGSSSQRGCRNPRSKPSVWARLSVLSISMCCWVNAPPTVRIIHSGHACNVEEERYTERVYTIREGETLELACLVSGHPRPQIRWTKTAGSASDRFQDSSVFNETLRITRIQRLQGGRYYCKAENGLGSPAIKSIRVDVYYLDDPIVTVHQSIGEAKEQFYYERTVFLRCMANSNPPVRYSWRRGQEFLSQGSDKGVEIYEPFFTQGETKILKLKNLRPQDYANYSCIASVRNVCGIANKNVLFKLSNKTASPTIKLLVEDPIVVNPGQTVTLVCVTSGGDPTPTLTWVHSADELPKKSVLNGGTLTLPAISIEEAGVYSCVASNNVGNPAKKSTTIVVRGLKKGRFWITPDPYHNDDNIQIGREVKISCQVEATPPEELLFSWLKNGRPLRSSERMVITHTDPEVQPGTTNLDIIDLKFTDFGTYTCVAVLRNGGIPEISIDVNISSTTVPPELTVXRDKSPLVVQEGDTVELQCLVSGKPKPIILWSRADKEVPMPDGGLQTESYDGALRIVNVSREMTGTYRCATSQYNGFNVKPREALVELTVQYPPAVEPLFTEIRQGLGRAFTLNCRMLRAHPSKVLKYEWKLGTRLLTMGQLDQRDETDYHVRALNREGYGEYTCEVTNEAGAGACRFLVTGRAYAPEFYYDTYSALWQNRPRVYGFKLQWTQQNPLSVDRIVAYRLGIKQTGQSRWWEQEIPMEGAIAKGELITHNLTELIKPEAYLVRLTPITRFGEGDSTDRTIRYSAPVNPHLREFQCSFEDEAVCMFTQDKTDDFDWTRHSAATRDTKYTPNTGPSSDRVGSKQGFYMYIETSRPRLEGEKARLLTPTFNVAPKSPYGTVTSSPTYCFGFYYHMYGKHIGALNAYLRQKGQSGADSSVWTLVGNQGDRWKQAKVNIHPTASFQLVLEGIRGPGIEGDIAIDDVTIEEGECKDPPHNTPQGPSVEAPSPHNNSSPGAQCGSPLPPQQQLPGGPVWKPPPPTTTAPQGPSVEAPSPHKHSSPGPQCGSPLPPQQQLPGGPSVEAPSPHNNSSPGPQCGSPLPPQQQLPGGPVWKPPPPTTTAPRGPSVEAPSPHNNSSPGAPVWKPPPPTTTALRGPSVEAPSPHNNSSPGAQCGSPLPPQQQLSGGPVWKPPPPTTTAPQGPTSPFSISPQHLPSTPPLNTSPQHLPSTPPLNTSPQHLPSTPPLSTSPQHLPSTPPLNTSPQHLPSTPPLNTSPQHLPSTPPLSTSPQHLPSTPPLNTSPQHLPSTSPLSTSPQHR
SIO_010081: mdga2a
subclass of: SO_0000673
so part of: mdga2a
location: complement(join(673015..673361,674204..674818,700030..700129,700603..700733,705810..705974,713456..713611,720772..720792,727660..727837,745398..745546,755012..755281,798861..799153,801781..802110,817914..818183,822197..822329,835130..835326,839543..839717,855355..855494,872627..872810))
location: region:673015-872810:-1
so has part: feature:872627-872810:-1:exon
so has part: feature:855355-855494:-1:exon
so has part: feature:839543-839717:-1:exon
so has part: feature:835130-835326:-1:exon
so has part: feature:822197-822329:-1:exon
so has part: feature:817914-818183:-1:exon
so has part: feature:801781-802110:-1:exon
so has part: feature:798861-799153:-1:exon
so has part: feature:755012-755281:-1:exon
so has part: feature:745398-745546:-1:exon
so has part: feature:727660-727837:-1:exon
so has part: feature:720772-720792:-1:exon
so has part: feature:713456-713611:-1:exon
so has part: feature:705810-705974:-1:exon
so has part: feature:700603-700733:-1:exon
so has part: feature:700030-700129:-1:exon
so has part: feature:674204-674818:-1:exon
so has part: feature:673015-673361:-1:exon

XP_038864696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:872627-872810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:855355-855494:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839543-839717:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835130-835326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822197-822329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:817914-818183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801781-802110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:798861-799153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:755012-755281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:745398-745546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:727660-727837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:720772-720792:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:713456-713611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:705810-705974:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:700603-700733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:700030-700129:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:674204-674818:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:673015-673361:-1:exon

LOC120060544
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060544
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 702794..702850
location: region:702794-702850:1
so has part: feature:702794-702850:1:exon
subclass of: SO_0000623

120060544
type: Gene
SIO_000068: ncbigene

position:702794:1
position: 702794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702850:1
position: 702850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702794-702850:1:exon

LOC120060544
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8040
nc RNA class: snRNA
gene: LOC120060544
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005478236.1
SIO_010081: LOC120060544
subclass of: SO_0000673
so part of: LOC120060544
location: 702794..702850
location: region:702794-702850:1
so has part: feature:702794-702850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702794-702850:1:exon

lrr1
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: lrr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 984257..989572
location: region:984257-989572:1
so has part: feature:984257-989572:1:exon
subclass of: SO_0000010

120059791
type: Gene
SIO_000068: ncbigene

position:984257:1
position: 984257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989572:1
position: 989572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984257-989572:1:exon

lrr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: lrr1
product: leucine rich repeat protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039008840.1
SIO_010081: lrr1
subclass of: SO_0000673
so part of: lrr1
location: join(984257..984506,985422..985520,987274..988001,988150..989572)
location: region:984257-989572:1
so has part: feature:984257-984506:1:exon
so has part: feature:985422-985520:1:exon
so has part: feature:987274-988001:1:exon
so has part: feature:988150-989572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:984257-984506:1:exon

position:984506:1
position: 984506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:985422-985520:1:exon

position:985422:1
position: 985422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985520:1
position: 985520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:987274-988001:1:exon

position:987274:1
position: 987274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988001:1
position: 988001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:988150-989572:1:exon

position:988150:1
position: 988150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lrr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: lrr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat protein 1
translation: MKLQCDVEVVSRMLPTYGMKNRGKGARAVLSIGRHVDKTTQHHNIYLMICTAKDRTGSKYKLKENIETFFTRFVEEGKATVRLKEPAVDICLSKADANSLKNFLSAARLAHRGNDTDSLPLSTLTPVRARDVEKPKKKLTIVSKKDYPLTSNFPYSLEQLQVSYCKLSRVDMRMLSLKALRRLDLSNNNIKKLPDTIGDLGCLAELILHNNHLETFSEALCLSSLQRTLQHLDLSQNRLQALPPHFCQLRELINLKMDNNGLVWLPFRISHLSKLRFLSAAHNQLSLLPGDFRKLTLENLDLFGNPFAHPNPLDHTIQLTFPLTLQEMAARAVANLRIPYGPHLIPAHLCQDLELAKTCDCGCTCVNYYIKTAVSMNLHLVSHTVVLVDDMGGTDAPVQRHFCSLSCYSEFLDQCLQRGLR
SIO_010081: lrr1
subclass of: SO_0000673
so part of: lrr1
location: join(984324..984506,985422..985520,987274..988001,988150..988405)
location: region:984324-988405:1
so has part: feature:984324-984506:1:exon
so has part: feature:985422-985520:1:exon
so has part: feature:987274-988001:1:exon
so has part: feature:988150-988405:1:exon

XP_038864768.1
type: Protein
SIO_000068: ncbiprotein

position:984324:1
position: 984324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988405:1
position: 988405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984324-984506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985422-985520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:987274-988001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:988150-988405:1:exon

LOC120059716
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(990595..992895)
location: region:990595-992895:-1
so has part: feature:990595-992895:-1:exon
subclass of: SO_0000010

120059716
type: Gene
SIO_000068: ncbigene

position:990595:-1
position: 990595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992895:-1
position: 992895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990595-992895:-1:exon

LOC120059716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059716
product: protein kintoun-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008769.1
SIO_010081: LOC120059716
subclass of: SO_0000673
so part of: LOC120059716
location: complement(join(990595..990972,991126..992895))
location: region:990595-992895:-1
so has part: feature:991126-992895:-1:exon
so has part: feature:990595-990972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:991126-992895:-1:exon

position:991126:-1
position: 991126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:990595-990972:-1:exon

position:990972:-1
position: 990972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kintoun-like
translation: MEFCSKLKDLNITPDEIGRFTKAFQNEEFRKMLHEYAEEISKPENKKKYEEEIKLLEQERGVDIQFVHPEPYRALKTSMDGRQKCFINVCSNDMIRKPEFRRVDEAGRVGQHWSLPHSLTPGTPDRDTKGNKYTIYDVVFHPDTIHMAGNNPRFMEMVDKTAVEAVENGGRVKLDKNNVRVLKIKYKGTPHAAVMRKPFPGQPAKEKPSPLDDHLSFPYPDEKQPDTATNQKESRKPKAKIQSHTQISQRQQNANSPKEPTKPHYTLKYRSFIDLQDFRCSRDSGQSPRPKEIVITIDLPLLRSVADADLDVTERLVSLESKKPAYRLEVPMAYPVDENKGEAKFNKQKKQLVVTLPVLPLKEPTVAEVSGRQLVNDDGEEDFENSYAAQSEDATRGKEDTPDHSGRGKEDTPDHSGRGKEDTPDHSGRGKEDTPDHSGRGKEDTPDHSGRGKEDTPDHSGRGKEDTPDHSGRGKEDTPDHSGRGKEDTPDHSGRGKEDTPNHSGCIEGDSSEDVHCENATSLRSENQLISVLDDKIEFSEQSGDIEDKQHKLRSGESHRAKASEPTEFDGKTGCTDQNEGQSDDNNLHEVETDPSSLSERIDDPSNTAAMVIPSNLDNNNQAKDCSSPKIEEIVESQAPTKDKQKTVRFSEHVEVAQSQEEDDLPVEQTFQDCDMRPQQALLTEINQDGQEVVISDHTTSAGFVFQNSYIYDLD
SIO_010081: LOC120059716
subclass of: SO_0000673
so part of: LOC120059716
location: complement(join(990595..990972,991126..992895))
location: region:990595-992895:-1
so has part: feature:991126-992895:-1:exon
so has part: feature:990595-990972:-1:exon

XP_038864697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991126-992895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990595-990972:-1:exon

LOC120059792
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(995948..1001428)
location: region:995948-1001428:-1
so has part: feature:995948-1001428:-1:exon
subclass of: SO_0000011

120059792
type: Gene
SIO_000068: ncbigene

position:995948:-1
position: 995948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001428:-1
position: 1001428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995948-1001428:-1:exon

LOC120059792
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8040
nc RNA class: lncRNA
gene: LOC120059792
product: uncharacterized LOC120059792
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005478173.1
SIO_010081: LOC120059792
subclass of: SO_0000673
so part of: LOC120059792
location: complement(join(995948..997108,997206..997301,997840..997952,998231..998348,1000711..1000823,1001336..1001428))
location: region:995948-1001428:-1
so has part: feature:1001336-1001428:-1:exon
so has part: feature:1000711-1000823:-1:exon
so has part: feature:998231-998348:-1:exon
so has part: feature:997840-997952:-1:exon
so has part: feature:997206-997301:-1:exon
so has part: feature:995948-997108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1001336-1001428:-1:exon

position:1001336:-1
position: 1001336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000711-1000823:-1:exon

position:1000711:-1
position: 1000711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000823:-1
position: 1000823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:998231-998348:-1:exon

position:998231:-1
position: 998231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998348:-1
position: 998348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:997840-997952:-1:exon

position:997840:-1
position: 997840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997952:-1
position: 997952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:997206-997301:-1:exon

position:997206:-1
position: 997206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997301:-1
position: 997301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995948-997108:-1:exon

position:997108:-1
position: 997108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pole2
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: pole2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1001531..1010720
location: region:1001531-1010720:1
so has part: feature:1001531-1010720:1:exon
subclass of: SO_0000010

120059794
type: Gene
SIO_000068: ncbigene

position:1001531:1
position: 1001531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010720:1
position: 1010720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001531-1010720:1:exon

pole2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: pole2
product: polymerase (DNA directed), epsilon 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008842.1
SIO_010081: pole2
subclass of: SO_0000673
so part of: pole2
location: join(1001531..1001604,1002137..1002237,1002559..1002634,1002743..1002820,1003094..1003187,1003824..1003898,1004020..1004103,1004442..1004498,1004641..1004689,1004801..1004873,1005209..1005381,1005660..1005749,1005903..1005957,1006152..1006211,1006318..1006395,1008050..1008158,1009974..1010150,1010307..1010374,1010546..1010720)
location: region:1001531-1010720:1
so has part: feature:1001531-1001604:1:exon
so has part: feature:1002137-1002237:1:exon
so has part: feature:1002559-1002634:1:exon
so has part: feature:1002743-1002820:1:exon
so has part: feature:1003094-1003187:1:exon
so has part: feature:1003824-1003898:1:exon
so has part: feature:1004020-1004103:1:exon
so has part: feature:1004442-1004498:1:exon
so has part: feature:1004641-1004689:1:exon
so has part: feature:1004801-1004873:1:exon
so has part: feature:1005209-1005381:1:exon
so has part: feature:1005660-1005749:1:exon
so has part: feature:1005903-1005957:1:exon
so has part: feature:1006152-1006211:1:exon
so has part: feature:1006318-1006395:1:exon
so has part: feature:1008050-1008158:1:exon
so has part: feature:1009974-1010150:1:exon
so has part: feature:1010307-1010374:1:exon
so has part: feature:1010546-1010720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1001531-1001604:1:exon

position:1001604:1
position: 1001604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1002137-1002237:1:exon

position:1002137:1
position: 1002137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002237:1
position: 1002237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002559-1002634:1:exon

position:1002559:1
position: 1002559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002634:1
position: 1002634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1002743-1002820:1:exon

position:1002743:1
position: 1002743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002820:1
position: 1002820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1003094-1003187:1:exon

position:1003094:1
position: 1003094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003187:1
position: 1003187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1003824-1003898:1:exon

position:1003824:1
position: 1003824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003898:1
position: 1003898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1004020-1004103:1:exon

position:1004020:1
position: 1004020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004103:1
position: 1004103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1004442-1004498:1:exon

position:1004442:1
position: 1004442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004498:1
position: 1004498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1004641-1004689:1:exon

position:1004641:1
position: 1004641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004689:1
position: 1004689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1004801-1004873:1:exon

position:1004801:1
position: 1004801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004873:1
position: 1004873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1005209-1005381:1:exon

position:1005209:1
position: 1005209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005381:1
position: 1005381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1005660-1005749:1:exon

position:1005660:1
position: 1005660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005749:1
position: 1005749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1005903-1005957:1:exon

position:1005903:1
position: 1005903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005957:1
position: 1005957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1006152-1006211:1:exon

position:1006152:1
position: 1006152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006211:1
position: 1006211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1006318-1006395:1:exon

position:1006318:1
position: 1006318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006395:1
position: 1006395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1008050-1008158:1:exon

position:1008050:1
position: 1008050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008158:1
position: 1008158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1009974-1010150:1:exon

position:1009974:1
position: 1009974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010150:1
position: 1010150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1010307-1010374:1:exon

position:1010307:1
position: 1010307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010374:1
position: 1010374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1010546-1010720:1:exon

position:1010546:1
position: 1010546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pole2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: pole2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase epsilon subunit 2
translation: MEVRRVKTKVSAGFKMRGLMLRPEASRYLVEVLESVDELELDDVIERVMDAVEKQPLSSSMIELAVVETAVQDCSQSCDETIDNVFNIIGAFDVPRYIYSTERKKFVPLNMTTHSAPSLCGSARDKAELFRERYTLLQQRTHRHELFTPPVIGAAAEEGRNKFQLQTVEALLGSTAKLGEVIVLGMVTQLKEGKFYLEDPSGTVQLNLSKAQFHSGLYTESCFVLAEGWYEDSVFHVNAFGFPPTEPSSTTRAYYGNVNFFGGPSTTSVKASAKLKQLEEENEDAMFVVVSDVWLDSVEVLEKIHLMFSGYAAMPPTCFIFCGNFSSAPYGKTQIKSLKESLKVLADAICEYPSIHNSSRFVFVPGPEDPGPSTILPRPPLADHITEEFRQRVPFSVFTTNPCRIQYCSQEIVVIREDLVNKMCRNCVRLPSSNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYALRVYPVPDVIIFADKYDPFNISNTDCLCINPGSFPKSGFTFKVYYPSNRTVEDSKLQSL
SIO_010081: pole2
subclass of: SO_0000673
so part of: pole2
location: join(1001537..1001604,1002137..1002237,1002559..1002634,1002743..1002820,1003094..1003187,1003824..1003898,1004020..1004103,1004442..1004498,1004641..1004689,1004801..1004873,1005209..1005381,1005660..1005749,1005903..1005957,1006152..1006211,1006318..1006395,1008050..1008158,1009974..1010150,1010307..1010374,1010546..1010564)
location: region:1001537-1010564:1
so has part: feature:1001537-1001604:1:exon
so has part: feature:1002137-1002237:1:exon
so has part: feature:1002559-1002634:1:exon
so has part: feature:1002743-1002820:1:exon
so has part: feature:1003094-1003187:1:exon
so has part: feature:1003824-1003898:1:exon
so has part: feature:1004020-1004103:1:exon
so has part: feature:1004442-1004498:1:exon
so has part: feature:1004641-1004689:1:exon
so has part: feature:1004801-1004873:1:exon
so has part: feature:1005209-1005381:1:exon
so has part: feature:1005660-1005749:1:exon
so has part: feature:1005903-1005957:1:exon
so has part: feature:1006152-1006211:1:exon
so has part: feature:1006318-1006395:1:exon
so has part: feature:1008050-1008158:1:exon
so has part: feature:1009974-1010150:1:exon
so has part: feature:1010307-1010374:1:exon
so has part: feature:1010546-1010564:1:exon

XP_038864770.1
type: Protein
SIO_000068: ncbiprotein

position:1001537:1
position: 1001537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010564:1
position: 1010564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001537-1001604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002137-1002237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002559-1002634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1002743-1002820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003094-1003187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1003824-1003898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004020-1004103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004442-1004498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004641-1004689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1004801-1004873:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1005209-1005381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1005660-1005749:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1005903-1005957:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1006152-1006211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1006318-1006395:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1008050-1008158:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1009974-1010150:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1010307-1010374:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1010546-1010564:1:exon

LOC120059795
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1010888..1016217
location: region:1010888-1016217:1
so has part: feature:1010888-1016217:1:exon
subclass of: SO_0000010

120059795
type: Gene
SIO_000068: ncbigene

position:1010888:1
position: 1010888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016217:1
position: 1016217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010888-1016217:1:exon

LOC120059795
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059795
product: kelch domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039008843.1
SIO_010081: LOC120059795
subclass of: SO_0000673
so part of: LOC120059795
location: join(1010888..1010984,1011619..1011870,1012140..1012219,1012337..1012454,1012794..1012906,1013060..1013141,1013419..1013502,1013622..1013702,1013943..1014001,1014509..1014618,1014701..1014773,1014921..1015008,1015161..1015213,1015429..1016217)
location: region:1010888-1016217:1
so has part: feature:1010888-1010984:1:exon
so has part: feature:1011619-1011870:1:exon
so has part: feature:1012140-1012219:1:exon
so has part: feature:1012337-1012454:1:exon
so has part: feature:1012794-1012906:1:exon
so has part: feature:1013060-1013141:1:exon
so has part: feature:1013419-1013502:1:exon
so has part: feature:1013622-1013702:1:exon
so has part: feature:1013943-1014001:1:exon
so has part: feature:1014509-1014618:1:exon
so has part: feature:1014701-1014773:1:exon
so has part: feature:1014921-1015008:1:exon
so has part: feature:1015161-1015213:1:exon
so has part: feature:1015429-1016217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010888-1010984:1:exon

position:1010984:1
position: 1010984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011619-1011870:1:exon

position:1011619:1
position: 1011619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011870:1
position: 1011870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1012140-1012219:1:exon

position:1012140:1
position: 1012140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012219:1
position: 1012219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1012337-1012454:1:exon

position:1012337:1
position: 1012337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012454:1
position: 1012454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1012794-1012906:1:exon

position:1012794:1
position: 1012794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012906:1
position: 1012906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1013060-1013141:1:exon

position:1013060:1
position: 1013060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013141:1
position: 1013141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1013419-1013502:1:exon

position:1013419:1
position: 1013419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013502:1
position: 1013502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1013622-1013702:1:exon

position:1013622:1
position: 1013622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013702:1
position: 1013702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1013943-1014001:1:exon

position:1013943:1
position: 1013943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014001:1
position: 1014001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1014509-1014618:1:exon

position:1014509:1
position: 1014509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014618:1
position: 1014618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1014701-1014773:1:exon

position:1014701:1
position: 1014701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014773:1
position: 1014773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1014921-1015008:1:exon

position:1014921:1
position: 1014921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015008:1
position: 1015008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1015161-1015213:1:exon

position:1015161:1
position: 1015161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015213:1
position: 1015213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1015429-1016217:1:exon

position:1015429:1
position: 1015429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120059795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch domain-containing protein 2-like
translation: MAEIEEDIPDRLPVEEDELERDEEEGEFDWVVDEADELDEDDEDVVVLDTEAEPFELEQPAERSGHIAAVDGHYMYVWGGYKNSQTTGFFDLYLPRNEIWIYNMETERWKKQMTAGNLHTSMSGSCGVCVDGVLYLFGGHHARGNTDRVFRLPLRTPALCWEEMKDLKGLAPSCKDKLGCWVHKNRLVFFGGYGYMAQGAHRGTFEYDETSFMGDNPGRGWNNHIHILDLETSTWSQPVTKGNAPSPRAAHACAKVGNRGYVFGGRYRDYRLNDMYYIDMDSWEWHEMSVPQQGPVGRSWHSLTPVSPDHIFLFGGFTTSRETLSDAWLYCVSKNEWQQFKHNHTESPRLWHTACSGPGGEVFVFGGCANNLLSHQRAAHSKELLVFTVQPKSLVRFCMEAALQHRELLSGSWDCLPKHLLHTLRQRMGGINALGS
SIO_010081: LOC120059795
subclass of: SO_0000673
so part of: LOC120059795
location: join(1011625..1011870,1012140..1012219,1012337..1012454,1012794..1012906,1013060..1013141,1013419..1013502,1013622..1013702,1013943..1014001,1014509..1014618,1014701..1014773,1014921..1015008,1015161..1015213,1015429..1015552)
location: region:1011625-1015552:1
so has part: feature:1011625-1011870:1:exon
so has part: feature:1012140-1012219:1:exon
so has part: feature:1012337-1012454:1:exon
so has part: feature:1012794-1012906:1:exon
so has part: feature:1013060-1013141:1:exon
so has part: feature:1013419-1013502:1:exon
so has part: feature:1013622-1013702:1:exon
so has part: feature:1013943-1014001:1:exon
so has part: feature:1014509-1014618:1:exon
so has part: feature:1014701-1014773:1:exon
so has part: feature:1014921-1015008:1:exon
so has part: feature:1015161-1015213:1:exon
so has part: feature:1015429-1015552:1:exon

XP_038864771.1
type: Protein
SIO_000068: ncbiprotein

position:1011625:1
position: 1011625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015552:1
position: 1015552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011625-1011870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1012140-1012219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1012337-1012454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1012794-1012906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1013060-1013141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013419-1013502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013622-1013702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013943-1014001:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1014509-1014618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1014701-1014773:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1014921-1015008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1015161-1015213:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1015429-1015552:1:exon

LOC120059796
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1020491..1024195
location: region:1020491-1024195:1
so has part: feature:1020491-1024195:1:exon
subclass of: SO_0000010

120059796
type: Gene
SIO_000068: ncbigene

position:1020491:1
position: 1020491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024195:1
position: 1024195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020491-1024195:1:exon

LOC120059796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059796
product: MAPK/MAK/MRK overlapping kinase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008844.1
SIO_010081: LOC120059796
subclass of: SO_0000673
so part of: LOC120059796
location: join(1020491..1020497,1020729..1020843,1021265..1021354,1021454..1021524,1021651..1021729,1021880..1021928,1022060..1022238,1022420..1022521,1022630..1022803,1022945..1023068,1023272..1023463,1024048..1024195)
location: region:1020491-1024195:1
so has part: feature:1020491-1020497:1:exon
so has part: feature:1020729-1020843:1:exon
so has part: feature:1021265-1021354:1:exon
so has part: feature:1021454-1021524:1:exon
so has part: feature:1021651-1021729:1:exon
so has part: feature:1021880-1021928:1:exon
so has part: feature:1022060-1022238:1:exon
so has part: feature:1022420-1022521:1:exon
so has part: feature:1022630-1022803:1:exon
so has part: feature:1022945-1023068:1:exon
so has part: feature:1023272-1023463:1:exon
so has part: feature:1024048-1024195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020491-1020497:1:exon

position:1020497:1
position: 1020497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1020729-1020843:1:exon

position:1020729:1
position: 1020729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020843:1
position: 1020843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1021265-1021354:1:exon

position:1021265:1
position: 1021265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021354:1
position: 1021354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1021454-1021524:1:exon

position:1021454:1
position: 1021454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021524:1
position: 1021524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1021651-1021729:1:exon

position:1021651:1
position: 1021651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021729:1
position: 1021729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1021880-1021928:1:exon

position:1021880:1
position: 1021880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021928:1
position: 1021928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1022060-1022238:1:exon

position:1022060:1
position: 1022060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022238:1
position: 1022238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1022420-1022521:1:exon

position:1022420:1
position: 1022420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022521:1
position: 1022521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1022630-1022803:1:exon

position:1022630:1
position: 1022630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022803:1
position: 1022803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1022945-1023068:1:exon

position:1022945:1
position: 1022945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023068:1
position: 1023068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1023272-1023463:1:exon

position:1023272:1
position: 1023272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023463:1
position: 1023463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1024048-1024195:1:exon

position:1024048:1
position: 1024048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120059796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAPK/MAK/MRK overlapping kinase-like
translation: MDNYKIINKIGEGTFSEVVKAQNLKDGKYYACKTMKQSLSSLEQANNLREVQAMKILNPHPNIIQLHELIFDKESGTLSLVCELMEMNIYEFIRGRQQPLPESKIRHYMYQLCKSLDHMHSNGIFHRDIKPENILIKHDVLKLGDFGSCRSLHSKPPHTEYISTRWYRAPECLLTDGYYSHKMDMWSVGCVFYEIISLSPLFPGTNELDQVTKIHDVLGTPDNSLLQKFPQSRAMRFDFPLRKGSGISQLIPNCSAPSLSLLYQMLTYDPEERIGARAALQHIFFRELRLAERRADSLRRAIVTVEGGESSGTPNSVDHLRRMARQGRRQHNSKHVAEPLIRRNAPQVELPKLNVVVPAPQITYPVSTVPVLTITHRGSLPAITSKKCYSRLAKPRDESHCSAFKTYYMPPLDRKPGGY
SIO_010081: LOC120059796
subclass of: SO_0000673
so part of: LOC120059796
location: join(1020491..1020497,1020729..1020843,1021265..1021354,1021454..1021524,1021651..1021729,1021880..1021928,1022060..1022238,1022420..1022521,1022630..1022803,1022945..1023068,1023272..1023463,1024048..1024125)
location: region:1020491-1024125:1
so has part: feature:1020491-1020497:1:exon
so has part: feature:1020729-1020843:1:exon
so has part: feature:1021265-1021354:1:exon
so has part: feature:1021454-1021524:1:exon
so has part: feature:1021651-1021729:1:exon
so has part: feature:1021880-1021928:1:exon
so has part: feature:1022060-1022238:1:exon
so has part: feature:1022420-1022521:1:exon
so has part: feature:1022630-1022803:1:exon
so has part: feature:1022945-1023068:1:exon
so has part: feature:1023272-1023463:1:exon
so has part: feature:1024048-1024125:1:exon

XP_038864772.1
type: Protein
SIO_000068: ncbiprotein

position:1024125:1
position: 1024125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020491-1020497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020729-1020843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021265-1021354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021454-1021524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1021651-1021729:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1021880-1021928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022060-1022238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022420-1022521:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1022630-1022803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022945-1023068:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023272-1023463:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1024048-1024125:1:exon

LOC120059797
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1029710..1036352)
location: region:1029710-1036352:-1
so has part: feature:1029710-1036352:-1:exon
subclass of: SO_0000010

120059797
type: Gene
SIO_000068: ncbigene

position:1029710:-1
position: 1029710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036352:-1
position: 1036352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1036352:-1:exon

LOC120059797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059797
product: WD repeat-containing protein 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039008846.1
SIO_010081: LOC120059797
subclass of: SO_0000673
so part of: LOC120059797
location: complement(join(1029710..1030699,1031317..1032612,1032823..1033005,1036104..1036352))
location: region:1029710-1036352:-1
so has part: feature:1036104-1036352:-1:exon
so has part: feature:1032823-1033005:-1:exon
so has part: feature:1031317-1032612:-1:exon
so has part: feature:1029710-1030699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1036104-1036352:-1:exon

position:1036104:-1
position: 1036104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1032823-1033005:-1:exon

position:1032823:-1
position: 1032823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033005:-1
position: 1033005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1031317-1032612:-1:exon

position:1031317:-1
position: 1031317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032612:-1
position: 1032612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029710-1030699:-1:exon

position:1030699:-1
position: 1030699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 20-like
translation: MAAEGGGKELNEIKTQFNTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFANVNDQSGNGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATADGVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGLERLFLVAHSSGNMYLYNVENTCGTTVPHYQLLKQGKNYSVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDAVELHGTMKSYFGGLLCMCWSPDGKYIVAGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDHYTTSVEDADPMEFSGSDEDFQGQIHFGRDRANSTQSRLSKPNSTDSRTVHTTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSPPAGGGVAGDIVNNVSNNPSTNDSGANTPSNSLSSPLPRSNSLPHSPAMTANNKSSAIASGVSKFATLSLHDRKEQHQETDHKRNHSMGHISSKSSDKLNMLTKSRTDPAKTLGTLLCPRMEDLPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFIWTWARPGKVGLSSQKQAVSPSGTII
SIO_010081: LOC120059797
subclass of: SO_0000673
so part of: LOC120059797
location: complement(join(1030649..1030699,1031317..1032612,1032823..1033005,1036104..1036352))
location: region:1030649-1036352:-1
so has part: feature:1036104-1036352:-1:exon
so has part: feature:1032823-1033005:-1:exon
so has part: feature:1031317-1032612:-1:exon
so has part: feature:1030649-1030699:-1:exon

XP_038864774.1
type: Protein
SIO_000068: ncbiprotein

position:1030649:-1
position: 1030649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036104-1036352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032823-1033005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031317-1032612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030649-1030699:-1:exon

dync1h1
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: dync1h1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1039397..1088125)
location: region:1039397-1088125:-1
so has part: feature:1039397-1088125:-1:exon
subclass of: SO_0000010

120059717
type: Gene
SIO_000068: ncbigene

position:1039397:-1
position: 1039397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088125:-1
position: 1088125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039397-1088125:-1:exon

dync1h1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: dync1h1
product: dynein, cytoplasmic 1, heavy chain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008770.1
SIO_010081: dync1h1
subclass of: SO_0000673
so part of: dync1h1
location: complement(join(1039397..1039796,1040029..1040153,1040398..1040566,1040946..1041088,1041369..1041522,1041834..1042048,1043878..1043981,1044447..1044664,1044963..1045133,1045676..1045789,1046087..1046271,1046394..1046505,1046712..1046872,1047109..1047184,1047386..1047560,1047742..1047836,1047967..1048101,1048354..1048607,1048823..1049120,1049443..1049596,1049909..1050036,1051147..1051359,1051733..1051948,1052244..1052361,1054051..1054246,1055077..1055197,1055385..1055504,1055692..1055865,1056272..1056476,1057386..1057600,1059062..1059223,1059464..1059578,1059702..1059835,1060213..1060342,1060611..1060774,1061590..1061755,1062041..1062162,1062550..1062756,1063430..1063663,1064713..1064853,1065282..1065512,1065680..1065907,1066339..1066495,1066771..1067009,1067517..1067729,1068065..1068248,1068461..1068701,1068836..1068995,1069117..1069217,1069559..1069841,1070076..1070270,1070572..1070926,1072072..1072245,1072699..1072865,1073109..1073255,1073464..1073673,1073910..1074020,1074161..1074274,1074537..1074692,1074851..1075090,1075477..1075596,1075756..1075866,1075998..1076174,1076437..1076577,1076847..1076993,1077117..1077266,1077585..1077764,1077914..1078990,1079282..1079509,1080042..1080313,1080565..1080751,1081032..1081287,1081409..1081582,1082084..1082171,1087873..1088125))
location: region:1039397-1088125:-1
so has part: feature:1087873-1088125:-1:exon
so has part: feature:1082084-1082171:-1:exon
so has part: feature:1081409-1081582:-1:exon
so has part: feature:1081032-1081287:-1:exon
so has part: feature:1080565-1080751:-1:exon
so has part: feature:1080042-1080313:-1:exon
so has part: feature:1079282-1079509:-1:exon
so has part: feature:1077914-1078990:-1:exon
so has part: feature:1077585-1077764:-1:exon
so has part: feature:1077117-1077266:-1:exon
so has part: feature:1076847-1076993:-1:exon
so has part: feature:1076437-1076577:-1:exon
so has part: feature:1075998-1076174:-1:exon
so has part: feature:1075756-1075866:-1:exon
so has part: feature:1075477-1075596:-1:exon
so has part: feature:1074851-1075090:-1:exon
so has part: feature:1074537-1074692:-1:exon
so has part: feature:1074161-1074274:-1:exon
so has part: feature:1073910-1074020:-1:exon
so has part: feature:1073464-1073673:-1:exon
so has part: feature:1073109-1073255:-1:exon
so has part: feature:1072699-1072865:-1:exon
so has part: feature:1072072-1072245:-1:exon
so has part: feature:1070572-1070926:-1:exon
so has part: feature:1070076-1070270:-1:exon
so has part: feature:1069559-1069841:-1:exon
so has part: feature:1069117-1069217:-1:exon
so has part: feature:1068836-1068995:-1:exon
so has part: feature:1068461-1068701:-1:exon
so has part: feature:1068065-1068248:-1:exon
so has part: feature:1067517-1067729:-1:exon
so has part: feature:1066771-1067009:-1:exon
so has part: feature:1066339-1066495:-1:exon
so has part: feature:1065680-1065907:-1:exon
so has part: feature:1065282-1065512:-1:exon
so has part: feature:1064713-1064853:-1:exon
so has part: feature:1063430-1063663:-1:exon
so has part: feature:1062550-1062756:-1:exon
so has part: feature:1062041-1062162:-1:exon
so has part: feature:1061590-1061755:-1:exon
so has part: feature:1060611-1060774:-1:exon
so has part: feature:1060213-1060342:-1:exon
so has part: feature:1059702-1059835:-1:exon
so has part: feature:1059464-1059578:-1:exon
so has part: feature:1059062-1059223:-1:exon
so has part: feature:1057386-1057600:-1:exon
so has part: feature:1056272-1056476:-1:exon
so has part: feature:1055692-1055865:-1:exon
so has part: feature:1055385-1055504:-1:exon
so has part: feature:1055077-1055197:-1:exon
so has part: feature:1054051-1054246:-1:exon
so has part: feature:1052244-1052361:-1:exon
so has part: feature:1051733-1051948:-1:exon
so has part: feature:1051147-1051359:-1:exon
so has part: feature:1049909-1050036:-1:exon
so has part: feature:1049443-1049596:-1:exon
so has part: feature:1048823-1049120:-1:exon
so has part: feature:1048354-1048607:-1:exon
so has part: feature:1047967-1048101:-1:exon
so has part: feature:1047742-1047836:-1:exon
so has part: feature:1047386-1047560:-1:exon
so has part: feature:1047109-1047184:-1:exon
so has part: feature:1046712-1046872:-1:exon
so has part: feature:1046394-1046505:-1:exon
so has part: feature:1046087-1046271:-1:exon
so has part: feature:1045676-1045789:-1:exon
so has part: feature:1044963-1045133:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087873-1088125:-1:exon

position:1087873:-1
position: 1087873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1082084-1082171:-1:exon

position:1082084:-1
position: 1082084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082171:-1
position: 1082171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081409-1081582:-1:exon

position:1081409:-1
position: 1081409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081582:-1
position: 1081582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1081032-1081287:-1:exon

position:1081032:-1
position: 1081032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081287:-1
position: 1081287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1080565-1080751:-1:exon

position:1080565:-1
position: 1080565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080751:-1
position: 1080751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1080042-1080313:-1:exon

position:1080042:-1
position: 1080042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080313:-1
position: 1080313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1079282-1079509:-1:exon

position:1079282:-1
position: 1079282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079509:-1
position: 1079509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1077914-1078990:-1:exon

position:1077914:-1
position: 1077914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078990:-1
position: 1078990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1077585-1077764:-1:exon

position:1077585:-1
position: 1077585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077764:-1
position: 1077764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1077117-1077266:-1:exon

position:1077117:-1
position: 1077117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077266:-1
position: 1077266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1076847-1076993:-1:exon

position:1076847:-1
position: 1076847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076993:-1
position: 1076993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1076437-1076577:-1:exon

position:1076437:-1
position: 1076437
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 29
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 33
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SIO_000300: 34
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SIO_000300: 35
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SIO_000300: 36
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SIO_000300: 37
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SIO_000300: 38
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SIO_000300: 39
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SIO_000300: 40
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SIO_000300: 41
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SIO_000300: 42
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SIO_000300: 43
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urn:…
SIO_000300: 44
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urn:…
SIO_000300: 45
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SIO_000300: 46
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urn:…
SIO_000300: 47
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SIO_000300: 48
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SIO_000300: 49
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SIO_000300: 50
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SIO_000300: 51
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SIO_000300: 52
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SIO_000300: 53
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SIO_000300: 54
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SIO_000300: 55
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SIO_000300: 56
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SIO_000300: 57
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SIO_000300: 58
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SIO_000300: 59
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SIO_000300: 62
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SIO_000300: 68
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SIO_000300: 69
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SIO_000300: 70
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SIO_000300: 71
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SIO_000300: 72
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SIO_000300: 73
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SIO_000300: 74
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SIO_000300: 75
SIO_000628: feature:1039397-1039796:-1:exon

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dync1h1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: dync1h1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 heavy chain 1
translation: MSDGGGGDDSSGTMEVSTTVQTVADAAVLQKHIRKLVPLLLEDGGDAPASLETALEEKTSIEQMRKFLSDPQIHTILVERSTLKEDVGDEGEEEKECISYNINIDIHYGLKSNSLAFIKRTGVIDADKPISTQVRVLTLSEDSPYETLHSFISNAVAPFFKSYIRESGKADRDGDKMAPSVEKKIAELEMGLLHLQQNIEIPEISLIIHPIILNIAKACYERGEKPKVTDFGDKVEDPTFLNQLQSGVNRWIREIQKVTKLDRDPASGTALQEISFWLNLERALNRIQEKRESPEVLLTLDILKHGKRFHATVSFDTDTGLKQAVETVNDYNPLMKDFPLNDLLSATELDKIRQALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKVLGTRKLMHVAYEEFEKVMVACFEVFQTWEDEYEKLQVLLRDIVKRKREENLKMVWRLSPAHRKLQARLDHMRRFRRQHEQLRAVIVRVLRPQVSAVPQHAPGEAVEPTEMKVAEVLFDAADANAIEEVNLAYENVKEVDGLDVSKEGMEAWEAAMKRYDERIDRVETRITARLRDQLGTAKNANEMFRIFSRFNALFVRPHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYPQSQSCKMSHVRDLPPVSGSIIWAKQIDRQLTAYMKRVEDVLGKGWENHVEGLKLKQDGDSFRAKLNTQEIFDDWARKVQQRNLGVSGRIFTIETSRARGRTGNMLKLKVNFLPEIITLSKEVRNLKWLSFRVPLAIVNKAHQANQLYPFAISLIESVRTYERTCEKVEERISISLLVAGLKKEVQALVTEGIALVWESYKLDPYVQRLAETVFNFQEKVDDLLLIEEKIDLEVRSLETCMYEHKTFTEILNRVQKAVDDLNLHSYSNLPIWVNKLDIEIERILGVRLQAGLRAWTQVLRGQMEDKADVDMDTEAPQVSHKPGGEPKIKNVVHELRITNQVIYLNPPIEDCRYKLYQEMFAWKMVILSLPRIQSQRYQVGVHYELSEEEKFYRNALTRMPDGPAALEEAYNSVKDNVNEVEQYVKVWLQYQCLWDMQAENIYNRLGEDLTKWQALLVQIRKARGTFDNAETKKEFGPVVIDYGKVQSKVNLKYDSWHKEVLSRFGQMLGNNMQDFHSQISKSRQELEQHSVDTASTSDAVTFITYVQTLKRKIKQFEKNVDLFRNGQRLLEKQRFQFPPSWLYIDNIEGEWGAFSDIMKRKDTAIQQQVANLQMKIVQEDKAVEGRTIDLLADWEKTKPVAGGLRPEEALQSLTIYEGKFGRLKDDRDKCSRAKEALELTDTGLLSGSEERVQVALEELQDLKGVWSELSKVWEQIDQAKEQPWVSVQPRKLRQSLDGLLNELKNFPARLRQYASYEHVQRLLKSYMKINMLVIELKSEALKDRHWKQLMKRLHVNWVLSELTLGQIWDVDLQRNEMVVRDVLLVAQGEMALEEFLKQIREVWNAYELDLINYQNKCRLIRGWDDLFNKVKEHINSVSAMKLSPYYKVFEEDAMSWEDKLNRIMALFDVWIDVQRRWVYLEGIFTGSADIKHLLPVETQRFSSISTEFLALMKKVTKSPLVMDVLNIQGVQRSLERLADLLGKIQKALGEYLERERSSFPRFYFVGDEDLLEIIGNSKNVAKLQKHFKKMFAGVSSILLNEESTVVLGISSREGEEIFYKTPVDLLEHPKINDWLTLVEKEMRVTLAKLLAESVTEVGAFNKGNSIELDKYIDWIDRYQAQLVVLSAQIDWSEKVDAALTTISGGGDMSPMSIVLTNVEATLNVLADTVLMEQPPLRRRKLEHLITELVHQRDVTRQLIKNKVDNPKSFEWLSQMRFYFDPKQTDVLQQLSIQMANAKFNYGFEYLGVQDKLVQTPLTDRCYLTMTQALEARFGGAPFGPAGTGKTESVKALGHQLGRFVLVFNCDETFDFQAMGRIFVGLCQVGAWGCFDEFNRLEERMLSAVSQQVQFIQVALREHSNPNRDRSAPVTCELL…
SIO_010081: dync1h1
subclass of: SO_0000673
so part of: dync1h1
location: complement(join(1039668..1039796,1040029..1040153,1040398..1040566,1040946..1041088,1041369..1041522,1041834..1042048,1043878..1043981,1044447..1044664,1044963..1045133,1045676..1045789,1046087..1046271,1046394..1046505,1046712..1046872,1047109..1047184,1047386..1047560,1047742..1047836,1047967..1048101,1048354..1048607,1048823..1049120,1049443..1049596,1049909..1050036,1051147..1051359,1051733..1051948,1052244..1052361,1054051..1054246,1055077..1055197,1055385..1055504,1055692..1055865,1056272..1056476,1057386..1057600,1059062..1059223,1059464..1059578,1059702..1059835,1060213..1060342,1060611..1060774,1061590..1061755,1062041..1062162,1062550..1062756,1063430..1063663,1064713..1064853,1065282..1065512,1065680..1065907,1066339..1066495,1066771..1067009,1067517..1067729,1068065..1068248,1068461..1068701,1068836..1068995,1069117..1069217,1069559..1069841,1070076..1070270,1070572..1070926,1072072..1072245,1072699..1072865,1073109..1073255,1073464..1073673,1073910..1074020,1074161..1074274,1074537..1074692,1074851..1075090,1075477..1075596,1075756..1075866,1075998..1076174,1076437..1076577,1076847..1076993,1077117..1077266,1077585..1077764,1077914..1078990,1079282..1079509,1080042..1080313,1080565..1080751,1081032..1081287,1081409..1081582,1082084..1082171,1087873..1088125))
location: region:1039668-1088125:-1
so has part: feature:1087873-1088125:-1:exon
so has part: feature:1082084-1082171:-1:exon
so has part: feature:1081409-1081582:-1:exon
so has part: feature:1081032-1081287:-1:exon
so has part: feature:1080565-1080751:-1:exon
so has part: feature:1080042-1080313:-1:exon
so has part: feature:1079282-1079509:-1:exon
so has part: feature:1077914-1078990:-1:exon
so has part: feature:1077585-1077764:-1:exon
so has part: feature:1077117-1077266:-1:exon
so has part: feature:1076847-1076993:-1:exon
so has part: feature:1076437-1076577:-1:exon
so has part: feature:1075998-1076174:-1:exon
so has part: feature:1075756-1075866:-1:exon
so has part: feature:1075477-1075596:-1:exon
so has part: feature:1074851-1075090:-1:exon
so has part: feature:1074537-1074692:-1:exon
so has part: feature:1074161-1074274:-1:exon
so has part: feature:1073910-1074020:-1:exon
so has part: feature:1073464-1073673:-1:exon
so has part: feature:1073109-1073255:-1:exon
so has part: feature:1072699-1072865:-1:exon
so has part: feature:1072072-1072245:-1:exon
so has part: feature:1070572-1070926:-1:exon
so has part: feature:1070076-1070270:-1:exon
so has part: feature:1069559-1069841:-1:exon
so has part: feature:1069117-1069217:-1:exon
so has part: feature:1068836-1068995:-1:exon
so has part: feature:1068461-1068701:-1:exon
so has part: feature:1068065-1068248:-1:exon
so has part: feature:1067517-1067729:-1:exon
so has part: feature:1066771-1067009:-1:exon
so has part: feature:1066339-1066495:-1:exon
so has part: feature:1065680-1065907:-1:exon
so has part: feature:1065282-1065512:-1:exon
so has part: feature:1064713-1064853:-1:exon
so has part: feature:1063430-1063663:-1:exon
so has part: feature:1062550-1062756:-1:exon
so has part: feature:1062041-1062162:-1:exon
so has part: feature:1061590-1061755:-1:exon
so has part: feature:1060611-1060774:-1:exon
so has part: feature:1060213-1060342:-1:exon
so has part: feature:1059702-1059835:-1:exon
so has part: feature:1059464-1059578:-1:exon
so has part: feature:1059062-1059223:-1:exon
so has part: feature:1057386-1057600:-1:exon
so has part: feature:1056272-1056476:-1:exon
so has part: feature:1055692-1055865:-1:exon
so has part: feature:1055385-1055504:-1:exon
so has part: feature:1055077-1055197:-1:exon
so has part: feature:1054051-1054246:-1:exon
so has part: feature:1052244-1052361:-1:exon
so has part: feature:1051733-1051948:-1:exon
so has part: feature:1051147-1051359:-1:exon
so has part: feature:1049909-1050036:-1:exon
so has part: feature:1049443-1049596:-1:exon
so has part: feature:1048823-1049120:-1:exon
so has part: feature:1048354-1048607:-1:exon
so has part: feature:1047967-1048101:-1:exon
so has part: feature:1047742-1047836:-1:exon
so has part: feature:1047386-1047560:-1:exon
so has part: feature:1047109-1047184:-1:exon
so has part: feature:1046712-1046872:-1:exon
so has part: feature:1046394-1046505:-1:exon
so has part: feature:1046087-1046271:-1:exon
so has part: feature:1045676-1045789:-1:exon

XP_038864698.1
type: Protein
SIO_000068: ncbiprotein

position:1039668:-1
position: 1039668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087873-1088125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1082084-1082171:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081409-1081582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1081032-1081287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080565-1080751:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080042-1080313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1079282-1079509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077914-1078990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077585-1077764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077117-1077266:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076847-1076993:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1076437-1076577:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1075998-1076174:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1075756-1075866:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1075477-1075596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1074851-1075090:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1074537-1074692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1074161-1074274:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1073910-1074020:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1073464-1073673:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1073109-1073255:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1072699-1072865:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1072072-1072245:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1070572-1070926:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1070076-1070270:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1069559-1069841:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1069117-1069217:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1068836-1068995:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1068461-1068701:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1068065-1068248:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1067517-1067729:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1066771-1067009:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1066339-1066495:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1065680-1065907:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1065282-1065512:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1064713-1064853:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1063430-1063663:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1062550-1062756:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1062041-1062162:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1061590-1061755:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1060611-1060774:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1060213-1060342:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1059702-1059835:-1:exon

urn:…
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SIO_000628: feature:1059464-1059578:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1059062-1059223:-1:exon

urn:…
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SIO_000628: feature:1057386-1057600:-1:exon

urn:…
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SIO_000628: feature:1056272-1056476:-1:exon

urn:…
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SIO_000628: feature:1055692-1055865:-1:exon

urn:…
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SIO_000628: feature:1055385-1055504:-1:exon

urn:…
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SIO_000628: feature:1055077-1055197:-1:exon

urn:…
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SIO_000628: feature:1054051-1054246:-1:exon

urn:…
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SIO_000628: feature:1052244-1052361:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1051733-1051948:-1:exon

urn:…
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SIO_000628: feature:1051147-1051359:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1049909-1050036:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1049443-1049596:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1048823-1049120:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1048354-1048607:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1047967-1048101:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1047742-1047836:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1047386-1047560:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1047109-1047184:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1046712-1046872:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1046394-1046505:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1046087-1046271:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1045676-1045789:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1044963-1045133:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1044447-1044664:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1043878-1043981:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1041834-1042048:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1041369-1041522:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1040946-1041088:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1040398-1040566:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1040029-1040153:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1039668-1039796:-1:exon

LOC120060547
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060547
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1041622..1041691)
location: region:1041622-1041691:-1
so has part: feature:1041622-1041691:-1:exon
subclass of: SO_0000578

120060547
type: Gene
SIO_000068: ncbigene

position:1041622:-1
position: 1041622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041691:-1
position: 1041691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041622-1041691:-1:exon

LOC120060547
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8040
nc RNA class: snoRNA
gene: LOC120060547
product: small nucleolar RNA SNORD50
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00278
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005478239.1
SIO_010081: LOC120060547
subclass of: SO_0000673
so part of: LOC120060547
location: complement(1041622..1041691)
location: region:1041622-1041691:-1
so has part: feature:1041622-1041691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1041622-1041691:-1:exon

LOC120060546
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060546
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1044830..1044901)
location: region:1044830-1044901:-1
so has part: feature:1044830-1044901:-1:exon
subclass of: SO_0000578

120060546
type: Gene
SIO_000068: ncbigene

position:1044830:-1
position: 1044830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044901:-1
position: 1044901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044830-1044901:-1:exon

LOC120060546
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8040
nc RNA class: snoRNA
gene: LOC120060546
product: small nucleolar RNA SNORD50
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00278
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005478238.1
SIO_010081: LOC120060546
subclass of: SO_0000673
so part of: LOC120060546
location: complement(1044830..1044901)
location: region:1044830-1044901:-1
so has part: feature:1044830-1044901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044830-1044901:-1:exon

LOC120060548
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060548
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1048227..1048298)
location: region:1048227-1048298:-1
so has part: feature:1048227-1048298:-1:exon
subclass of: SO_0000578

120060548
type: Gene
SIO_000068: ncbigene

position:1048227:-1
position: 1048227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048298:-1
position: 1048298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048227-1048298:-1:exon

LOC120060548
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8040
nc RNA class: snoRNA
gene: LOC120060548
product: small nucleolar RNA SNORD50
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00278
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005478240.1
SIO_010081: LOC120060548
subclass of: SO_0000673
so part of: LOC120060548
location: complement(1048227..1048298)
location: region:1048227-1048298:-1
so has part: feature:1048227-1048298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048227-1048298:-1:exon

LOC120060549
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060549
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1048700..1048771)
location: region:1048700-1048771:-1
so has part: feature:1048700-1048771:-1:exon
subclass of: SO_0000578

120060549
type: Gene
SIO_000068: ncbigene

position:1048700:-1
position: 1048700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048771:-1
position: 1048771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048700-1048771:-1:exon

LOC120060549
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8040
nc RNA class: snoRNA
gene: LOC120060549
product: small nucleolar RNA SNORD50
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00278
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005478241.1
SIO_010081: LOC120060549
subclass of: SO_0000673
so part of: LOC120060549
location: complement(1048700..1048771)
location: region:1048700-1048771:-1
so has part: feature:1048700-1048771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048700-1048771:-1:exon

LOC120060094
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1109865..1142697
location: region:1109865-1142697:1
so has part: feature:1109865-1142697:1:exon
subclass of: SO_0000010

120060094
type: Gene
SIO_000068: ncbigene

position:1109865:1
position: 1109865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142697:1
position: 1142697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109865-1142697:1:exon

LOC120060094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060094
product: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039009160.1
SIO_010081: LOC120060094
subclass of: SO_0000673
so part of: LOC120060094
location: join(1109865..1110032,1121278..1121477,1126012..1126122,1126623..1126715,1128534..1128664,1128833..1128892,1129115..1129223,1130256..1130309,1136348..1136518,1136882..1137009,1137675..1137776,1138146..1138230,1138888..1139007,1139600..1142697)
location: region:1109865-1142697:1
so has part: feature:1109865-1110032:1:exon
so has part: feature:1121278-1121477:1:exon
so has part: feature:1126012-1126122:1:exon
so has part: feature:1126623-1126715:1:exon
so has part: feature:1128534-1128664:1:exon
so has part: feature:1128833-1128892:1:exon
so has part: feature:1129115-1129223:1:exon
so has part: feature:1130256-1130309:1:exon
so has part: feature:1136348-1136518:1:exon
so has part: feature:1136882-1137009:1:exon
so has part: feature:1137675-1137776:1:exon
so has part: feature:1138146-1138230:1:exon
so has part: feature:1138888-1139007:1:exon
so has part: feature:1139600-1142697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109865-1110032:1:exon

position:1110032:1
position: 1110032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1121278-1121477:1:exon

position:1121278:1
position: 1121278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121477:1
position: 1121477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1126012-1126122:1:exon

position:1126012:1
position: 1126012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126122:1
position: 1126122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1126623-1126715:1:exon

position:1126623:1
position: 1126623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126715:1
position: 1126715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1128534-1128664:1:exon

position:1128534:1
position: 1128534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128664:1
position: 1128664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1128833-1128892:1:exon

position:1128833:1
position: 1128833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128892:1
position: 1128892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1129115-1129223:1:exon

position:1129115:1
position: 1129115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129223:1
position: 1129223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130256-1130309:1:exon

position:1130256:1
position: 1130256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130309:1
position: 1130309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1136348-1136518:1:exon

position:1136348:1
position: 1136348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136518:1
position: 1136518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1136882-1137009:1:exon

position:1136882:1
position: 1136882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137009:1
position: 1137009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1137675-1137776:1:exon

position:1137675:1
position: 1137675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137776:1
position: 1137776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1138146-1138230:1:exon

position:1138146:1
position: 1138146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138230:1
position: 1138230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1138888-1139007:1:exon

position:1138888:1
position: 1138888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139007:1
position: 1139007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1139600-1142697:1:exon

position:1139600:1
position: 1139600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060094
product: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_039009159.1
SIO_010081: LOC120060094
subclass of: SO_0000673
so part of: LOC120060094
location: join(1109865..1110032,1121278..1121477,1126012..1126122,1126623..1126715,1128534..1128664,1128833..1128892,1129115..1129223,1130256..1130309,1136348..1136518,1136882..1137009,1137675..1137776,1138146..1138218,1138621..1138660,1139600..1142697)
location: region:1109865-1142697:1
so has part: feature:1109865-1110032:1:exon
so has part: feature:1121278-1121477:1:exon
so has part: feature:1126012-1126122:1:exon
so has part: feature:1126623-1126715:1:exon
so has part: feature:1128534-1128664:1:exon
so has part: feature:1128833-1128892:1:exon
so has part: feature:1129115-1129223:1:exon
so has part: feature:1130256-1130309:1:exon
so has part: feature:1136348-1136518:1:exon
so has part: feature:1136882-1137009:1:exon
so has part: feature:1137675-1137776:1:exon
so has part: feature:1138146-1138218:1:exon
so has part: feature:1138621-1138660:1:exon
so has part: feature:1139600-1142697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109865-1110032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1121278-1121477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126012-1126122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126623-1126715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128534-1128664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1128833-1128892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129115-1129223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130256-1130309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136348-1136518:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136882-1137009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137675-1137776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1138146-1138218:1:exon

position:1138218:1
position: 1138218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1138621-1138660:1:exon

position:1138621:1
position: 1138621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138660:1
position: 1138660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1139600-1142697:1:exon

LOC120060094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X2
translation: MLTCNKAGIRMVVDAPNSNGPFQPVALMHFRDCAPAEQEKLFVQKLRQCCVLFDFLSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHVFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVMQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKHINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEKAKSKDREEAWIKIENLAKSNPQVCVCSLIRVDSTGLNGPVAMEFDGPLTYEEVHRLKKTVTEEVAQLRTRDQRKDRPMVRRKSDLPQDIYTAKALETHRRADVMITTRDGL
SIO_010081: LOC120060094
subclass of: SO_0000673
so part of: LOC120060094
location: join(1109939..1110032,1121278..1121477,1126012..1126122,1126623..1126715,1128534..1128664,1128833..1128892,1129115..1129223,1130256..1130309,1136348..1136518,1136882..1137009,1137675..1137776,1138146..1138230,1138888..1139007,1139600..1139737)
location: region:1109939-1139737:1
so has part: feature:1109939-1110032:1:exon
so has part: feature:1121278-1121477:1:exon
so has part: feature:1126012-1126122:1:exon
so has part: feature:1126623-1126715:1:exon
so has part: feature:1128534-1128664:1:exon
so has part: feature:1128833-1128892:1:exon
so has part: feature:1129115-1129223:1:exon
so has part: feature:1130256-1130309:1:exon
so has part: feature:1136348-1136518:1:exon
so has part: feature:1136882-1137009:1:exon
so has part: feature:1137675-1137776:1:exon
so has part: feature:1138146-1138230:1:exon
so has part: feature:1138888-1139007:1:exon
so has part: feature:1139600-1139737:1:exon

XP_038865088.1
type: Protein
SIO_000068: ncbiprotein

position:1109939:1
position: 1109939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139737:1
position: 1139737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109939-1110032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1121278-1121477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126012-1126122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126623-1126715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128534-1128664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1128833-1128892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129115-1129223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130256-1130309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136348-1136518:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136882-1137009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137675-1137776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1138146-1138230:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1138888-1139007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1139600-1139737:1:exon

LOC120060094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
translation: MLTCNKAGIRMVVDAPNSNGPFQPVALMHFRDCAPAEQEKLFVQKLRQCCVLFDFLSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHVFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVMQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKHINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEKAKSKDREEAWIKIENLAKSNPQVVF
SIO_010081: LOC120060094
subclass of: SO_0000673
so part of: LOC120060094
location: join(1109939..1110032,1121278..1121477,1126012..1126122,1126623..1126715,1128534..1128664,1128833..1128892,1129115..1129223,1130256..1130309,1136348..1136518,1136882..1137009,1137675..1137776,1138146..1138218,1138621..1138632)
location: region:1109939-1138632:1
so has part: feature:1109939-1110032:1:exon
so has part: feature:1121278-1121477:1:exon
so has part: feature:1126012-1126122:1:exon
so has part: feature:1126623-1126715:1:exon
so has part: feature:1128534-1128664:1:exon
so has part: feature:1128833-1128892:1:exon
so has part: feature:1129115-1129223:1:exon
so has part: feature:1130256-1130309:1:exon
so has part: feature:1136348-1136518:1:exon
so has part: feature:1136882-1137009:1:exon
so has part: feature:1137675-1137776:1:exon
so has part: feature:1138146-1138218:1:exon
so has part: feature:1138621-1138632:1:exon

XP_038865087.1
type: Protein
SIO_000068: ncbiprotein

position:1138632:1
position: 1138632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109939-1110032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1121278-1121477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126012-1126122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126623-1126715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128534-1128664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1128833-1128892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129115-1129223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130256-1130309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136348-1136518:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136882-1137009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137675-1137776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1138146-1138218:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1138621-1138632:1:exon

LOC120059798
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1175078..1175875)
location: region:1175078-1175875:-1
so has part: feature:1175078-1175875:-1:exon

120059798
type: Gene
SIO_000068: ncbigene

position:1175078:-1
position: 1175078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175875:-1
position: 1175875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175078-1175875:-1:exon

LOC120059798
type: Exon
subclass of: SO_0000147
RO_0002162: 8040
gene: LOC120059798
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
pseudo: true
SIO_010081: LOC120059798
subclass of: SO_0000673
so part of: LOC120059798
location: complement(1175078..1175875)
location: region:1175078-1175875:-1
so has part: feature:1175078-1175875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1175078-1175875:-1:exon

LOC120059718
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1294700..1300034)
location: region:1294700-1300034:-1
so has part: feature:1294700-1300034:-1:exon
subclass of: SO_0000010

120059718
type: Gene
SIO_000068: ncbigene

position:1294700:-1
position: 1294700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300034:-1
position: 1300034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294700-1300034:-1:exon

LOC120059718
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059718
product: protein delta homolog 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_039008771.1
SIO_010081: LOC120059718
subclass of: SO_0000673
so part of: LOC120059718
location: complement(join(1294700..1295492,1297132..1297273,1297871..1298001,1298327..1298377,1300024..1300034))
location: region:1294700-1300034:-1
so has part: feature:1300024-1300034:-1:exon
so has part: feature:1298327-1298377:-1:exon
so has part: feature:1297871-1298001:-1:exon
so has part: feature:1297132-1297273:-1:exon
so has part: feature:1294700-1295492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300024-1300034:-1:exon

position:1300024:-1
position: 1300024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1298327-1298377:-1:exon

position:1298327:-1
position: 1298327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298377:-1
position: 1298377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1297871-1298001:-1:exon

position:1297871:-1
position: 1297871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298001:-1
position: 1298001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1297132-1297273:-1:exon

position:1297132:-1
position: 1297132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297273:-1
position: 1297273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1294700-1295492:-1:exon

position:1295492:-1
position: 1295492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059718
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein delta homolog 1
translation: MARSAGCNPENGYCEKPEECRCKPGWQGVTCKQCMPFPGCLHGSCEKAWQCICEEGWMGSQCDQDTNQCSSKPCTDNSTCIQTGQGGYLCICLPGYTGESCHLKKGSCLTNGSPCQNGGTCSDAGGLAAYPSCACPLGFAGDFCEIDTDSCNPNPCLNGGNCTDYGPAFTCACPAGFNGPTCNNTHVDPLSPCASTPCGNGGTCVVGSQKNRAGMYHCLCLPGCTFTGHECTPTQQPHRPKAKLRLAKLSPPHYSLPAHAFHKLLRPPERDLLKISLKETVHSASAASLVTRSQLICFGMLGLLTCLVILGTTGIIFFNRCETWMANAKYSHLVRQQREHLLRGNNSEDEGGHSVNIILPEKIKLTSFGKHYTSI
SIO_010081: LOC120059718
subclass of: SO_0000673
so part of: LOC120059718
location: complement(join(1294700..1295492,1297132..1297273,1297871..1298001,1298327..1298377,1300024..1300034))
location: region:1294700-1300034:-1
so has part: feature:1300024-1300034:-1:exon
so has part: feature:1298327-1298377:-1:exon
so has part: feature:1297871-1298001:-1:exon
so has part: feature:1297132-1297273:-1:exon
so has part: feature:1294700-1295492:-1:exon

XP_038864699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1300024-1300034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1298327-1298377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1297871-1298001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1297132-1297273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1294700-1295492:-1:exon

LOC120060095
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1523236..1532918
location: region:1523236-1532918:1
so has part: feature:1523236-1532918:1:exon
subclass of: SO_0000010

120060095
type: Gene
SIO_000068: ncbigene

position:1523236:1
position: 1523236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1532918:1
position: 1532918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1523236-1532918:1:exon

LOC120060095
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060095
product: tryptophan--tRNA ligase, cytoplasmic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009161.1
SIO_010081: LOC120060095
subclass of: SO_0000673
so part of: LOC120060095
location: join(1523236..1523343,1523955..1524086,1524726..1524933,1525245..1525353,1525556..1525675,1527236..1527418,1528960..1529060,1529370..1529482,1531019..1531192,1531534..1531674,1532329..1532918)
location: region:1523236-1532918:1
so has part: feature:1523236-1523343:1:exon
so has part: feature:1523955-1524086:1:exon
so has part: feature:1524726-1524933:1:exon
so has part: feature:1525245-1525353:1:exon
so has part: feature:1525556-1525675:1:exon
so has part: feature:1527236-1527418:1:exon
so has part: feature:1528960-1529060:1:exon
so has part: feature:1529370-1529482:1:exon
so has part: feature:1531019-1531192:1:exon
so has part: feature:1531534-1531674:1:exon
so has part: feature:1532329-1532918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1523236-1523343:1:exon

position:1523343:1
position: 1523343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1523955-1524086:1:exon

position:1523955:1
position: 1523955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524086:1
position: 1524086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1524726-1524933:1:exon

position:1524726:1
position: 1524726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524933:1
position: 1524933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1525245-1525353:1:exon

position:1525245:1
position: 1525245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525353:1
position: 1525353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1525556-1525675:1:exon

position:1525556:1
position: 1525556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525675:1
position: 1525675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1527236-1527418:1:exon

position:1527236:1
position: 1527236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527418:1
position: 1527418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1528960-1529060:1:exon

position:1528960:1
position: 1528960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529060:1
position: 1529060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1529370-1529482:1:exon

position:1529370:1
position: 1529370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529482:1
position: 1529482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1531019-1531192:1:exon

position:1531019:1
position: 1531019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1531192:1
position: 1531192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1531534-1531674:1:exon

position:1531534:1
position: 1531534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1531674:1
position: 1531674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1532329-1532918:1:exon

position:1532329:1
position: 1532329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tryptophan--tRNA ligase, cytoplasmic-like
translation: MTDCLGDGAGDMTPMDLYEKLTSQGDTVRTLKTEKAAKADIDAAVQLLLKLKVDYKQVTGQDYKTGCPPSECSVSQDNGPAADGEDMVDPWNVSTTNAKGVDYDKLIVRFGSSKIDQELVDRIEKVSGQKAHRFLRRGIFFSHRDMHQVLDAYEKNKSFYLYTGRGPSSEALHMGHLIPFIFTKWLQDTFDIPLVIQLTDDEKYLWKDLSLEDCHRYAVENAKDIIACGFDINKTFIFSDLDYMGASPDFYRNVVKVQKHVTFNQVKGIFGFGDSDCIGKIAFPAIQAAPSFSSSFPQIFKGRKDVQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDANSSIFLTDTPKQIKNKVNKHAFSGGKDTVEEHRKYGGNPNVDVSFMYLTFFLEDDEQLEKIRQDYASGALLTGELKKRLIETLQPMITSHQERRKQVTEETVKQFMTPRPLNFSF
SIO_010081: LOC120060095
subclass of: SO_0000673
so part of: LOC120060095
location: join(1523973..1524086,1524726..1524933,1525245..1525353,1525556..1525675,1527236..1527418,1528960..1529060,1529370..1529482,1531019..1531192,1531534..1531674,1532329..1532487)
location: region:1523973-1532487:1
so has part: feature:1523973-1524086:1:exon
so has part: feature:1524726-1524933:1:exon
so has part: feature:1525245-1525353:1:exon
so has part: feature:1525556-1525675:1:exon
so has part: feature:1527236-1527418:1:exon
so has part: feature:1528960-1529060:1:exon
so has part: feature:1529370-1529482:1:exon
so has part: feature:1531019-1531192:1:exon
so has part: feature:1531534-1531674:1:exon
so has part: feature:1532329-1532487:1:exon

XP_038865089.1
type: Protein
SIO_000068: ncbiprotein

position:1523973:1
position: 1523973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1532487:1
position: 1532487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1523973-1524086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1524726-1524933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1525245-1525353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525556-1525675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1527236-1527418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528960-1529060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1529370-1529482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1531019-1531192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1531534-1531674:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1532329-1532487:1:exon

slc25a47b
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: slc25a47b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1532845..1536679)
location: region:1532845-1536679:-1
so has part: feature:1532845-1536679:-1:exon
subclass of: SO_0000010

120060096
type: Gene
SIO_000068: ncbigene

position:1532845:-1
position: 1532845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536679:-1
position: 1536679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532845-1536679:-1:exon

slc25a47b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: slc25a47b
product: solute carrier family 25 member 47b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039009162.1
SIO_010081: slc25a47b
subclass of: SO_0000673
so part of: slc25a47b
location: complement(join(1532845..1534360,1535144..1535402,1535648..1535836,1535920..1535991,1536112..1536155,1536373..1536679))
location: region:1532845-1536679:-1
so has part: feature:1536373-1536679:-1:exon
so has part: feature:1536112-1536155:-1:exon
so has part: feature:1535920-1535991:-1:exon
so has part: feature:1535648-1535836:-1:exon
so has part: feature:1535144-1535402:-1:exon
so has part: feature:1532845-1534360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1536373-1536679:-1:exon

position:1536373:-1
position: 1536373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1536112-1536155:-1:exon

position:1536112:-1
position: 1536112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536155:-1
position: 1536155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1535920-1535991:-1:exon

position:1535920:-1
position: 1535920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535991:-1
position: 1535991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1535648-1535836:-1:exon

position:1535648:-1
position: 1535648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535836:-1
position: 1535836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1535144-1535402:-1:exon

position:1535144:-1
position: 1535144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535402:-1
position: 1535402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1532845-1534360:-1:exon

position:1534360:-1
position: 1534360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc25a47b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: slc25a47b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 47-B
translation: MHFADFVAGSVGGAFGVAVGYPLDTVKVRIQTQRRFTGVWQCIHTTWKTEGANGFYRGMSMPVTTVSISSSVVFGVYRNVLQCLHQLRSTSTGLDFLPAKVDFFLSGLSGGVAQVSVMAPADIVKVRMQCQMVHQGLDAQQPKYRGPMHCLLTIAREEGFLGLYKGAGALALRDGPSFATYFTIYHVICEQLSPPGKTQPEWNVVLLAGGLSGMCGWCIGTPMDVIKSRLQVDGMGKRRYTGFFHCIAQSIRTEGPGVLFKGLGLNCIRAFPVNMSVFAMYEVVVRLLRPKT
SIO_010081: slc25a47b
subclass of: SO_0000673
so part of: slc25a47b
location: complement(join(1534083..1534360,1535144..1535402,1535648..1535836,1535920..1535991,1536112..1536155,1536373..1536409))
location: region:1534083-1536409:-1
so has part: feature:1536373-1536409:-1:exon
so has part: feature:1536112-1536155:-1:exon
so has part: feature:1535920-1535991:-1:exon
so has part: feature:1535648-1535836:-1:exon
so has part: feature:1535144-1535402:-1:exon
so has part: feature:1534083-1534360:-1:exon

XP_038865090.1
type: Protein
SIO_000068: ncbiprotein

position:1534083:-1
position: 1534083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536409:-1
position: 1536409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536373-1536409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1536112-1536155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1535920-1535991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1535648-1535836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1535144-1535402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1534083-1534360:-1:exon

LOC120060097
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1544505..1559353
location: region:1544505-1559353:1
so has part: feature:1544505-1559353:1:exon
subclass of: SO_0000010

120060097
type: Gene
SIO_000068: ncbigene

position:1544505:1
position: 1544505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559353:1
position: 1559353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544505-1559353:1:exon

LOC120060097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060097
product: mitochondrial basic amino acids transporter-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039009164.1
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: join(1544505..1544972,1547454..1547497,1553643..1553726,1556799..1559353)
location: region:1544505-1559353:1
so has part: feature:1544505-1544972:1:exon
so has part: feature:1547454-1547497:1:exon
so has part: feature:1553643-1553726:1:exon
so has part: feature:1556799-1559353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1544505-1544972:1:exon

position:1544972:1
position: 1544972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1547454-1547497:1:exon

position:1547454:1
position: 1547454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547497:1
position: 1547497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1553643-1553726:1:exon

position:1553643:1
position: 1553643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553726:1
position: 1553726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1556799-1559353:1:exon

position:1556799:1
position: 1556799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial basic amino acids transporter-like isoform X1
translation: MDFTLDFAAGCIGGAAGVLVGHPFDTVKVRLQVQSVDRPLYRGTYHCFQSIVRQESMTGLYKGIGSPMMGLTFINAIVFGVQGNAMRRLGHDTPLNQFLAGASAGALQSVICCPMELAKTRMQLQGLGERKSKQKLYKNSLDCLVRIYRKEGFRGINRGMVTTLVRETPGFGIYFLTYDVLTRSLGCEPDDPYMILKLLFAGGMSGIASWISTYPVDVIKSRLQADGVGGHNKYNGIADCVRQSLKREGWRVFTHGLTSTLLRAFPVNATTFATVTLFLMYMRDDEGAVKDCEPQPAHSSLTVSPQQAQPSSL
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: join(1544933..1544972,1547454..1547497,1553643..1553726,1556799..1557572)
location: region:1544933-1557572:1
so has part: feature:1544933-1544972:1:exon
so has part: feature:1547454-1547497:1:exon
so has part: feature:1553643-1553726:1:exon
so has part: feature:1556799-1557572:1:exon

XP_038865092.1
type: Protein
SIO_000068: ncbiprotein

position:1544933:1
position: 1544933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557572:1
position: 1557572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544933-1544972:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1547454-1547497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1553643-1553726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556799-1557572:1:exon

LOC120060097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060097
product: mitochondrial basic amino acids transporter-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039009165.1
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: join(1546408..1546524,1547454..1547497,1553643..1553726,1556799..1559353)
location: region:1546408-1559353:1
so has part: feature:1546408-1546524:1:exon
so has part: feature:1547454-1547497:1:exon
so has part: feature:1553643-1553726:1:exon
so has part: feature:1556799-1559353:1:exon

position:1546408:1
position: 1546408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546408-1546524:1:exon

position:1546524:1
position: 1546524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1547454-1547497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1553643-1553726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556799-1559353:1:exon

LOC120060097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial basic amino acids transporter-like isoform X2
translation: MGAAGVLVGHPFDTVKVRLQVQSVDRPLYRGTYHCFQSIVRQESMTGLYKGIGSPMMGLTFINAIVFGVQGNAMRRLGHDTPLNQFLAGASAGALQSVICCPMELAKTRMQLQGLGERKSKQKLYKNSLDCLVRIYRKEGFRGINRGMVTTLVRETPGFGIYFLTYDVLTRSLGCEPDDPYMILKLLFAGGMSGIASWISTYPVDVIKSRLQADGVGGHNKYNGIADCVRQSLKREGWRVFTHGLTSTLLRAFPVNATTFATVTLFLMYMRDDEGAVKDCEPQPAHSSLTVSPQQAQPSSL
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: join(1546521..1546524,1547454..1547497,1553643..1553726,1556799..1557572)
location: region:1546521-1557572:1
so has part: feature:1546521-1546524:1:exon
so has part: feature:1547454-1547497:1:exon
so has part: feature:1553643-1553726:1:exon
so has part: feature:1556799-1557572:1:exon

XP_038865093.1
type: Protein
SIO_000068: ncbiprotein

position:1546521:1
position: 1546521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546521-1546524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1547454-1547497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1553643-1553726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556799-1557572:1:exon

LOC120060097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060097
product: mitochondrial basic amino acids transporter-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039009166.1
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: join(1547251..1547322,1547454..1547497,1553643..1553726,1556799..1559353)
location: region:1547251-1559353:1
so has part: feature:1547251-1547322:1:exon
so has part: feature:1547454-1547497:1:exon
so has part: feature:1553643-1553726:1:exon
so has part: feature:1556799-1559353:1:exon

position:1547251:1
position: 1547251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547251-1547322:1:exon

position:1547322:1
position: 1547322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1547454-1547497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1553643-1553726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556799-1559353:1:exon

LOC120060097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060097
product: mitochondrial basic amino acids transporter-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039009167.1
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: join(1547480..1547497,1552835..1552927,1553319..1553360,1553643..1553726,1556799..1559353)
location: region:1547480-1559353:1
so has part: feature:1547480-1547497:1:exon
so has part: feature:1552835-1552927:1:exon
so has part: feature:1553319-1553360:1:exon
so has part: feature:1553643-1553726:1:exon
so has part: feature:1556799-1559353:1:exon

position:1547480:1
position: 1547480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547480-1547497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552835-1552927:1:exon

position:1552835:1
position: 1552835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552927:1
position: 1552927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1553319-1553360:1:exon

position:1553319:1
position: 1553319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553360:1
position: 1553360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1553643-1553726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1556799-1559353:1:exon

LOC120060097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial basic amino acids transporter-like isoform X3
translation: MTGLYKGIGSPMMGLTFINAIVFGVQGNAMRRLGHDTPLNQFLAGASAGALQSVICCPMELAKTRMQLQGLGERKSKQKLYKNSLDCLVRIYRKEGFRGINRGMVTTLVRETPGFGIYFLTYDVLTRSLGCEPDDPYMILKLLFAGGMSGIASWISTYPVDVIKSRLQADGVGGHNKYNGIADCVRQSLKREGWRVFTHGLTSTLLRAFPVNATTFATVTLFLMYMRDDEGAVKDCEPQPAHSSLTVSPQQAQPSSL
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: 1556799..1557572
location: region:1556799-1557572:1
so has part: feature:1556799-1557572:1:exon

XP_038865094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1556799-1557572:1:exon

LOC120060097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial basic amino acids transporter-like isoform X3
translation: MTGLYKGIGSPMMGLTFINAIVFGVQGNAMRRLGHDTPLNQFLAGASAGALQSVICCPMELAKTRMQLQGLGERKSKQKLYKNSLDCLVRIYRKEGFRGINRGMVTTLVRETPGFGIYFLTYDVLTRSLGCEPDDPYMILKLLFAGGMSGIASWISTYPVDVIKSRLQADGVGGHNKYNGIADCVRQSLKREGWRVFTHGLTSTLLRAFPVNATTFATVTLFLMYMRDDEGAVKDCEPQPAHSSLTVSPQQAQPSSL
SIO_010081: LOC120060097
subclass of: SO_0000673
so part of: LOC120060097
location: 1556799..1557572
location: region:1556799-1557572:1
so has part: feature:1556799-1557572:1:exon

XP_038865095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1556799-1557572:1:exon

LOC120060098
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1636540..1666248
location: region:1636540-1666248:1
so has part: feature:1636540-1666248:1:exon
subclass of: SO_0000010

120060098
type: Gene
SIO_000068: ncbigene

position:1636540:1
position: 1636540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666248:1
position: 1666248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1636540-1666248:1:exon

LOC120060098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060098
product: heme-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_039009168.1
SIO_010081: LOC120060098
subclass of: SO_0000673
so part of: LOC120060098
location: join(1636540..1637181,1647975..1648069,1661646..1661787,1661905..1662088,1662676..1666248)
location: region:1636540-1666248:1
so has part: feature:1636540-1637181:1:exon
so has part: feature:1647975-1648069:1:exon
so has part: feature:1661646-1661787:1:exon
so has part: feature:1661905-1662088:1:exon
so has part: feature:1662676-1666248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1636540-1637181:1:exon

position:1637181:1
position: 1637181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647975-1648069:1:exon

position:1647975:1
position: 1647975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648069:1
position: 1648069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1661646-1661787:1:exon

position:1661646:1
position: 1661646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661787:1
position: 1661787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1661905-1662088:1:exon

position:1661905:1
position: 1661905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1662088:1
position: 1662088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1662676-1666248:1:exon

position:1662676:1
position: 1662676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme-binding protein 1-like
translation: METGNCRMNGGGGLDGIGGGGDDSSNGMITLEDLESFSEDQLSDSGTGSLEEAGETIEDEEQQDRLLRYWQDAARGHQVEVPRDMAEPIQQITSNNNGQHDREQVPFTLITRKEKCGDVLYEKRHYEKAHWACITVHEDTYEQSICYGFMKLMRYICQQNSSGSYLGMTIPILTVIRTDENHSVLSKDVTVAYYLPTEYQVQPPLPSDTEISIEEWPATIVYTRSFTGATNEVTIINEISTMAEMLDSPATHVNDSFIVAGYTNPAVANRQNEIWFLERP
SIO_010081: LOC120060098
subclass of: SO_0000673
so part of: LOC120060098
location: join(1636932..1637181,1647975..1648069,1661646..1661787,1661905..1662088,1662676..1662847)
location: region:1636932-1662847:1
so has part: feature:1636932-1637181:1:exon
so has part: feature:1647975-1648069:1:exon
so has part: feature:1661646-1661787:1:exon
so has part: feature:1661905-1662088:1:exon
so has part: feature:1662676-1662847:1:exon

XP_038865096.1
type: Protein
SIO_000068: ncbiprotein

position:1636932:1
position: 1636932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1662847:1
position: 1662847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1636932-1637181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647975-1648069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1661646-1661787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1661905-1662088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1662676-1662847:1:exon

dcdc2b
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: dcdc2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1679613..1698766
location: region:1679613-1698766:1
so has part: feature:1679613-1698766:1:exon
subclass of: SO_0000010

120059719
type: Gene
SIO_000068: ncbigene

position:1679613:1
position: 1679613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698766:1
position: 1698766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679613-1698766:1:exon

dcdc2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: dcdc2b
product: doublecortin domain containing 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_039008773.1
SIO_010081: dcdc2b
subclass of: SO_0000673
so part of: dcdc2b
location: join(1679613..1679896,1682247..1682301,1687642..1687712,1687795..1687926,1690025..1690159,1691825..1691864,1691999..1692064,1692189..1692357,1692852..1692958,1693754..1693835,1693968..1694021,1696336..1696429,1698661..1698766)
location: region:1679613-1698766:1
so has part: feature:1679613-1679896:1:exon
so has part: feature:1682247-1682301:1:exon
so has part: feature:1687642-1687712:1:exon
so has part: feature:1687795-1687926:1:exon
so has part: feature:1690025-1690159:1:exon
so has part: feature:1691825-1691864:1:exon
so has part: feature:1691999-1692064:1:exon
so has part: feature:1692189-1692357:1:exon
so has part: feature:1692852-1692958:1:exon
so has part: feature:1693754-1693835:1:exon
so has part: feature:1693968-1694021:1:exon
so has part: feature:1696336-1696429:1:exon
so has part: feature:1698661-1698766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1679613-1679896:1:exon

position:1679896:1
position: 1679896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1682247-1682301:1:exon

position:1682247:1
position: 1682247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682301:1
position: 1682301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1687642-1687712:1:exon

position:1687642:1
position: 1687642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687712:1
position: 1687712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1687795-1687926:1:exon

position:1687795:1
position: 1687795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687926:1
position: 1687926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1690025-1690159:1:exon

position:1690025:1
position: 1690025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690159:1
position: 1690159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1691825-1691864:1:exon

position:1691825:1
position: 1691825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691864:1
position: 1691864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1691999-1692064:1:exon

position:1691999:1
position: 1691999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692064:1
position: 1692064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1692189-1692357:1:exon

position:1692189:1
position: 1692189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692357:1
position: 1692357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1692852-1692958:1:exon

position:1692852:1
position: 1692852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692958:1
position: 1692958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1693754-1693835:1:exon

position:1693754:1
position: 1693754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693835:1
position: 1693835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1693968-1694021:1:exon

position:1693968:1
position: 1693968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694021:1
position: 1694021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1696336-1696429:1:exon

position:1696336:1
position: 1696336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696429:1
position: 1696429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1698661-1698766:1:exon

position:1698661:1
position: 1698661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dcdc2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: dcdc2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: doublecortin domain-containing protein 2B
translation: MASCGSATLLLPPVKSVMVYRNGDPFYSGRRFVVNHRQVSTMEAFLNDVTHCIQAPLAVRTLYTPRQGHRVRELHDLQTGAQYVAAGFERFKKLDYLNTGLKKQPVPMGEGARARLLHRPNVSAKWRKYIPLPCIIHVFRNEDLRCSPFRFIIPRTWQHDLDQILGLVTEKASLRTGAVRRLCTLEGVTVSSADELVSGQFYVAVGAERFKKLPYVELLVPKASERNYPGNRRLSRRYKGRKAASGPEDSFSDSALLDSPESDGRRVKSTGDEVGETALPSIQRRPVKEESSIFYAKPVKVRVRNRGHPRPPPRTGPAQASVFRAVRRKREEVQGAEEVLEDENTVVDVPVDQRVAETVEDEDLIGRNPPHSNSQDQVCIYFDQGYKRSPSSPRTPRQGAEDGAKANHSTLKGFFVIDILRISKFSEKRGLSDGAHYAESDAYHGEDHSSNSSCINKQTHTHGM
SIO_010081: dcdc2b
subclass of: SO_0000673
so part of: dcdc2b
location: join(1679613..1679896,1682247..1682301,1687642..1687712,1687795..1687926,1690025..1690159,1691825..1691864,1691999..1692064,1692189..1692357,1692852..1692958,1693754..1693835,1693968..1694021,1696336..1696429,1698661..1698766)
location: region:1679613-1698766:1
so has part: feature:1679613-1679896:1:exon
so has part: feature:1682247-1682301:1:exon
so has part: feature:1687642-1687712:1:exon
so has part: feature:1687795-1687926:1:exon
so has part: feature:1690025-1690159:1:exon
so has part: feature:1691825-1691864:1:exon
so has part: feature:1691999-1692064:1:exon
so has part: feature:1692189-1692357:1:exon
so has part: feature:1692852-1692958:1:exon
so has part: feature:1693754-1693835:1:exon
so has part: feature:1693968-1694021:1:exon
so has part: feature:1696336-1696429:1:exon
so has part: feature:1698661-1698766:1:exon

XP_038864701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1679613-1679896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1682247-1682301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1687642-1687712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1687795-1687926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1690025-1690159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1691825-1691864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1691999-1692064:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692189-1692357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1692852-1692958:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1693754-1693835:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1693968-1694021:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1696336-1696429:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1698661-1698766:1:exon

LOC120059720
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1703653..1709842)
location: region:1703653-1709842:-1
so has part: feature:1703653-1709842:-1:exon
subclass of: SO_0000010

120059720
type: Gene
SIO_000068: ncbigene

position:1703653:-1
position: 1703653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709842:-1
position: 1709842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1703653-1709842:-1:exon

LOC120059720
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059720
product: non-compact myelin associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039008774.1
SIO_010081: LOC120059720
subclass of: SO_0000673
so part of: LOC120059720
location: complement(join(1703653..1703932,1708471..1708555,1709761..1709842))
location: region:1703653-1709842:-1
so has part: feature:1709761-1709842:-1:exon
so has part: feature:1708471-1708555:-1:exon
so has part: feature:1703653-1703932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1709761-1709842:-1:exon

position:1709761:-1
position: 1709761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1708471-1708555:-1:exon

position:1708471:-1
position: 1708471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708555:-1
position: 1708555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1703653-1703932:-1:exon

position:1703932:-1
position: 1703932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein
translation: MISTVSPETNFTTVVSNTKSKEQILTQSSGAMIAVIVIGIIIILTILLVILKTYNRRTHASRVLGRGSKGPPRQKMSSSTVQTSIPLGNLGASYLSGSFALSGSMSENGFRLPRVELSSLDQNNLEQQSTGSNSTVVTIHDTPSLENT
SIO_010081: LOC120059720
subclass of: SO_0000673
so part of: LOC120059720
location: complement(join(1703653..1703932,1708471..1708555,1709761..1709842))
location: region:1703653-1709842:-1
so has part: feature:1709761-1709842:-1:exon
so has part: feature:1708471-1708555:-1:exon
so has part: feature:1703653-1703932:-1:exon

XP_038864702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1709761-1709842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1708471-1708555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1703653-1703932:-1:exon

LOC120059799
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1740854..1808002)
location: region:1740854-1808002:-1
so has part: feature:1740854-1808002:-1:exon
subclass of: SO_0000010

120059799
type: Gene
SIO_000068: ncbigene

position:1740854:-1
position: 1740854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808002:-1
position: 1808002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1740854-1808002:-1:exon

LOC120059799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059799
product: calcipressin-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_039008847.1
SIO_010081: LOC120059799
subclass of: SO_0000673
so part of: LOC120059799
location: complement(join(1740854..1741017,1746867..1747038,1751499..1751672,1807805..1808002))
location: region:1740854-1808002:-1
so has part: feature:1807805-1808002:-1:exon
so has part: feature:1751499-1751672:-1:exon
so has part: feature:1746867-1747038:-1:exon
so has part: feature:1740854-1741017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807805-1808002:-1:exon

position:1807805:-1
position: 1807805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1751499-1751672:-1:exon

position:1751499:-1
position: 1751499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751672:-1
position: 1751672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1746867-1747038:-1:exon

position:1746867:-1
position: 1746867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747038:-1
position: 1747038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1740854-1741017:-1:exon

position:1741017:-1
position: 1741017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcipressin-3-like isoform X1
translation: MLREGAKAWSNVSEAYSSDPEEEEEEDMVCEENEDGEEEMMDLSELPTALFACSVHEAVFEEDRHRERFEALFRIYDEQTSFQMFKSFRRVRISFSTPEAAARARIELHETEFNGKQLKLYFAQVQNSGEDIDKSYLAPPAPVKQFLISPPASPPVGWSQSEDATPGINYDLLCAVAKLGPGEKYELHAGTESTPSVVVHVCDSDAEDDNDEARPKQKQQIVQTRRPDGPSQVLN
SIO_010081: LOC120059799
subclass of: SO_0000673
so part of: LOC120059799
location: complement(join(1740854..1741017,1746867..1747038,1751499..1751672,1807805..1808002))
location: region:1740854-1808002:-1
so has part: feature:1807805-1808002:-1:exon
so has part: feature:1751499-1751672:-1:exon
so has part: feature:1746867-1747038:-1:exon
so has part: feature:1740854-1741017:-1:exon

XP_038864775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1807805-1808002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1751499-1751672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1746867-1747038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740854-1741017:-1:exon

LOC120059799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059799
product: calcipressin-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_039008848.1
SIO_010081: LOC120059799
subclass of: SO_0000673
so part of: LOC120059799
location: complement(join(1740854..1741017,1746867..1747038,1751499..1751672,1781205..1781291))
location: region:1740854-1781291:-1
so has part: feature:1781205-1781291:-1:exon
so has part: feature:1751499-1751672:-1:exon
so has part: feature:1746867-1747038:-1:exon
so has part: feature:1740854-1741017:-1:exon

position:1781291:-1
position: 1781291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1781205-1781291:-1:exon

position:1781205:-1
position: 1781205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1751499-1751672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1746867-1747038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740854-1741017:-1:exon

LOC120059799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcipressin-3-like isoform X2
translation: MPSINMKLEMVTIIACEVDTEVFTSDKLQERFEALFRIYDEQTSFQMFKSFRRVRISFSTPEAAARARIELHETEFNGKQLKLYFAQVQNSGEDIDKSYLAPPAPVKQFLISPPASPPVGWSQSEDATPGINYDLLCAVAKLGPGEKYELHAGTESTPSVVVHVCDSDAEDDNDEARPKQKQQIVQTRRPDGPSQVLN
SIO_010081: LOC120059799
subclass of: SO_0000673
so part of: LOC120059799
location: complement(join(1740854..1741017,1746867..1747038,1751499..1751672,1781205..1781291))
location: region:1740854-1781291:-1
so has part: feature:1781205-1781291:-1:exon
so has part: feature:1751499-1751672:-1:exon
so has part: feature:1746867-1747038:-1:exon
so has part: feature:1740854-1741017:-1:exon

XP_038864776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1781205-1781291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1751499-1751672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1746867-1747038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740854-1741017:-1:exon

nipal3
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: nipal3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1813306..1817706)
location: region:1813306-1817706:-1
so has part: feature:1813306-1817706:-1:exon
subclass of: SO_0000010

120060099
type: Gene
SIO_000068: ncbigene

position:1813306:-1
position: 1813306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817706:-1
position: 1817706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813306-1817706:-1:exon

nipal3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: nipal3
product: NIPA like domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039009170.1
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(1813306..1813781,1814177..1814271,1814466..1814529,1814624..1814712,1814977..1815112,1815414..1815510,1815777..1815922,1816273..1816332,1816739..1816910,1817041..1817109,1817505..1817706))
location: region:1813306-1817706:-1
so has part: feature:1817505-1817706:-1:exon
so has part: feature:1817041-1817109:-1:exon
so has part: feature:1816739-1816910:-1:exon
so has part: feature:1816273-1816332:-1:exon
so has part: feature:1815777-1815922:-1:exon
so has part: feature:1815414-1815510:-1:exon
so has part: feature:1814977-1815112:-1:exon
so has part: feature:1814624-1814712:-1:exon
so has part: feature:1814466-1814529:-1:exon
so has part: feature:1814177-1814271:-1:exon
so has part: feature:1813306-1813781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1817505-1817706:-1:exon

position:1817505:-1
position: 1817505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1817041-1817109:-1:exon

position:1817041:-1
position: 1817041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817109:-1
position: 1817109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1816739-1816910:-1:exon

position:1816739:-1
position: 1816739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816910:-1
position: 1816910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1816273-1816332:-1:exon

position:1816273:-1
position: 1816273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816332:-1
position: 1816332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1815777-1815922:-1:exon

position:1815777:-1
position: 1815777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815922:-1
position: 1815922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1815414-1815510:-1:exon

position:1815414:-1
position: 1815414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815510:-1
position: 1815510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1814977-1815112:-1:exon

position:1814977:-1
position: 1814977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815112:-1
position: 1815112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1814624-1814712:-1:exon

position:1814624:-1
position: 1814624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814712:-1
position: 1814712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1814466-1814529:-1:exon

position:1814466:-1
position: 1814466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814529:-1
position: 1814529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1814177-1814271:-1:exon

position:1814177:-1
position: 1814177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814271:-1
position: 1814271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1813306-1813781:-1:exon

position:1813781:-1
position: 1813781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nipal3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: nipal3
product: NIPA like domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039009169.1
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(1813306..1813781,1814168..1814271,1814466..1814529,1814624..1814712,1814977..1815112,1815414..1815510,1815777..1815922,1816273..1816332,1816739..1816910,1817041..1817109,1817505..1817706))
location: region:1813306-1817706:-1
so has part: feature:1817505-1817706:-1:exon
so has part: feature:1817041-1817109:-1:exon
so has part: feature:1816739-1816910:-1:exon
so has part: feature:1816273-1816332:-1:exon
so has part: feature:1815777-1815922:-1:exon
so has part: feature:1815414-1815510:-1:exon
so has part: feature:1814977-1815112:-1:exon
so has part: feature:1814624-1814712:-1:exon
so has part: feature:1814466-1814529:-1:exon
so has part: feature:1814168-1814271:-1:exon
so has part: feature:1813306-1813781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1817505-1817706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1817041-1817109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1816739-1816910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1816273-1816332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1815777-1815922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1815414-1815510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1814977-1815112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1814624-1814712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1814466-1814529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1814168-1814271:-1:exon

position:1814168:-1
position: 1814168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1813306-1813781:-1:exon

nipal3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: nipal3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X2
translation: MAGVEYTAVGGDSYTENLIGTLLAIFGNLLVSIAVSIQKYSHVTLAGTKDPRAFYRTKTWWCGLALTVLGEAANFVSYAFAPLSLIAPLNAVSVIASSILGFIFLREKWKPKEFLKRYVLSFLGCILTVAGTYLFATFGPNYHQKLTAENIVKQVVGWPFLLYVLLEIITFCLLLYFYKQRNANYLVVILLLVALLGSVTVITVKAVAGMLVLSVQGTMQLNYPIFYVMFVCMVATVVFQATFLSQATHLYNSSMIACVNYILSTSFAIVAGAIFYLEFNHEDILHICMFLLGCFSCFLGVFLITKNRKRLKAFEPYVTMDMSQGIPTIHDKGWRAVQPDYNGSFSYGALVNNDSVVPATLPEPDHDQLAVTPSPTAAPYSSADLKND
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(1813588..1813781,1814177..1814271,1814466..1814529,1814624..1814712,1814977..1815112,1815414..1815510,1815777..1815922,1816273..1816332,1816739..1816910,1817041..1817109,1817505..1817549))
location: region:1813588-1817549:-1
so has part: feature:1817505-1817549:-1:exon
so has part: feature:1817041-1817109:-1:exon
so has part: feature:1816739-1816910:-1:exon
so has part: feature:1816273-1816332:-1:exon
so has part: feature:1815777-1815922:-1:exon
so has part: feature:1815414-1815510:-1:exon
so has part: feature:1814977-1815112:-1:exon
so has part: feature:1814624-1814712:-1:exon
so has part: feature:1814466-1814529:-1:exon
so has part: feature:1814177-1814271:-1:exon
so has part: feature:1813588-1813781:-1:exon

XP_038865098.1
type: Protein
SIO_000068: ncbiprotein

position:1813588:-1
position: 1813588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817549:-1
position: 1817549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1817505-1817549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1817041-1817109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1816739-1816910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1816273-1816332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1815777-1815922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1815414-1815510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1814977-1815112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1814624-1814712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1814466-1814529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1814177-1814271:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1813588-1813781:-1:exon

nipal3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: nipal3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MAGVEYTAVGGDSYTENLIGTLLAIFGNLLVSIAVSIQKYSHVTLAGTKDPRAFYRTKTWWCGLALTVLGEAANFVSYAFAPLSLIAPLNAVSVIASSILGFIFLREKWKPKEFLKRYVLSFLGCILTVAGTYLFATFGPNYHQKLTAENIVKQVVGWPFLLYVLLEIITFCLLLYFYKQRNANYLVVILLLVALLGSVTVITVKAVAGMLVLSVQGTMQLNYPIFYVMFVCMVATVVFQATFLSQATHLYNSSMIACVNYILSTSFAIVAGAIFYLEFNHEDILHICMFLLGCFSCFLGVFLITKNRKRLKAFEPYVTMDMSQGNEGIPTIHDKGWRAVQPDYNGSFSYGALVNNDSVVPATLPEPDHDQLAVTPSPTAAPYSSADLKND
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(1813588..1813781,1814168..1814271,1814466..1814529,1814624..1814712,1814977..1815112,1815414..1815510,1815777..1815922,1816273..1816332,1816739..1816910,1817041..1817109,1817505..1817549))
location: region:1813588-1817549:-1
so has part: feature:1817505-1817549:-1:exon
so has part: feature:1817041-1817109:-1:exon
so has part: feature:1816739-1816910:-1:exon
so has part: feature:1816273-1816332:-1:exon
so has part: feature:1815777-1815922:-1:exon
so has part: feature:1815414-1815510:-1:exon
so has part: feature:1814977-1815112:-1:exon
so has part: feature:1814624-1814712:-1:exon
so has part: feature:1814466-1814529:-1:exon
so has part: feature:1814168-1814271:-1:exon
so has part: feature:1813588-1813781:-1:exon

XP_038865097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1817505-1817549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1817041-1817109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1816739-1816910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1816273-1816332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1815777-1815922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1815414-1815510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1814977-1815112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1814624-1814712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1814466-1814529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1814168-1814271:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1813588-1813781:-1:exon

LOC120060100
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1869649..1887409
location: region:1869649-1887409:1
so has part: feature:1869649-1887409:1:exon
subclass of: SO_0000010

120060100
type: Gene
SIO_000068: ncbigene

position:1869649:1
position: 1869649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1887409:1
position: 1887409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869649-1887409:1:exon

LOC120060100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060100
product: enhancer of rudimentary homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009173.1
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869649..1869744,1873444..1873531,1874992..1875112,1886763..1887409)
location: region:1869649-1887409:1
so has part: feature:1869649-1869744:1:exon
so has part: feature:1873444-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1886763-1887409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1869649-1869744:1:exon

position:1869744:1
position: 1869744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1873444-1873531:1:exon

position:1873444:1
position: 1873444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1873531:1
position: 1873531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

position:1874992:1
position: 1874992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875112:1
position: 1875112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1886763-1887409:1:exon

position:1886763:1
position: 1886763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060100
product: enhancer of rudimentary homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_039009171.1
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869657..1869744,1873441..1873531,1874992..1875112,1886763..1887409)
location: region:1869657-1887409:1
so has part: feature:1869657-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1886763-1887409:1:exon

position:1869657:1
position: 1869657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869657-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

position:1873441:1
position: 1873441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1886763-1887409:1:exon

LOC120060100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060100
product: enhancer of rudimentary homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039009176.1
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869657..1869744,1873441..1873531,1874992..1875112,1884215..1884277,1886763..1886872)
location: region:1869657-1886872:1
so has part: feature:1869657-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884277:1:exon
so has part: feature:1886763-1886872:1:exon

position:1886872:1
position: 1886872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869657-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884277:1:exon

position:1884215:1
position: 1884215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884277:1
position: 1884277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1886763-1886872:1:exon

LOC120060100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060100
product: enhancer of rudimentary homolog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039009177.1
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869657..1869744,1873441..1873531,1874992..1875112,1884215..1884277,1886306..1886348)
location: region:1869657-1886348:1
so has part: feature:1869657-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884277:1:exon
so has part: feature:1886306-1886348:1:exon

position:1886348:1
position: 1886348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869657-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886306-1886348:1:exon

position:1886306:1
position: 1886306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060100
product: enhancer of rudimentary homolog, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039009178.1
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869657..1869744,1873441..1873531,1874992..1875112,1884215..1884277,1886176..1886195)
location: region:1869657-1886195:1
so has part: feature:1869657-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884277:1:exon
so has part: feature:1886176-1886195:1:exon

position:1886195:1
position: 1886195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869657-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886176-1886195:1:exon

position:1886176:1
position: 1886176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060100
product: enhancer of rudimentary homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039009175.1
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869657..1869744,1873441..1873531,1874992..1875112,1884215..1884277,1886110..1886130)
location: region:1869657-1886130:1
so has part: feature:1869657-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884277:1:exon
so has part: feature:1886110-1886130:1:exon

position:1886130:1
position: 1886130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869657-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886110-1886130:1:exon

position:1886110:1
position: 1886110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060100
product: enhancer of rudimentary homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_039009174.1
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869657..1869744,1873441..1873531,1874992..1875112,1883883..1883941)
location: region:1869657-1883941:1
so has part: feature:1869657-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1883883-1883941:1:exon

position:1883941:1
position: 1883941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869657-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883883-1883941:1:exon

position:1883883:1
position: 1883883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog isoform X1
translation: MQSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNTPSITYDISQLFDFIHDLADLSCLVYRADSQTYQPYNKDWIKEKIYVLLRRQAQQAGK
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869742..1869744,1873441..1873531,1874992..1875112,1886763..1886865)
location: region:1869742-1886865:1
so has part: feature:1869742-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1886763-1886865:1:exon

XP_038865099.1
type: Protein
SIO_000068: ncbiprotein

position:1869742:1
position: 1869742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1886865:1
position: 1886865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869742-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1886763-1886865:1:exon

LOC120060100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog isoform X2
translation: MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNTPSITYDISQLFDFIHDLADLSCLVYRADSQTYQPYNKDWIKEKIYVLLRRQAQQAGK
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869742..1869744,1873444..1873531,1874992..1875112,1886763..1886865)
location: region:1869742-1886865:1
so has part: feature:1869742-1869744:1:exon
so has part: feature:1873444-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1886763-1886865:1:exon

XP_038865101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1869742-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873444-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1886763-1886865:1:exon

LOC120060100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog isoform X4
translation: MQSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNTPSITYDISQLFDFIHDLADLSCLVYRADSQTYQPMF
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869742..1869744,1873441..1873531,1874992..1875112,1884215..1884254)
location: region:1869742-1884254:1
so has part: feature:1869742-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884254:1:exon

XP_038865103.1
type: Protein
SIO_000068: ncbiprotein

position:1884254:1
position: 1884254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869742-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884254:1:exon

LOC120060100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog isoform X4
translation: MQSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNTPSITYDISQLFDFIHDLADLSCLVYRADSQTYQPMF
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869742..1869744,1873441..1873531,1874992..1875112,1884215..1884254)
location: region:1869742-1884254:1
so has part: feature:1869742-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884254:1:exon

XP_038865104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1869742-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884254:1:exon

LOC120060100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog isoform X4
translation: MQSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNTPSITYDISQLFDFIHDLADLSCLVYRADSQTYQPMF
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869742..1869744,1873441..1873531,1874992..1875112,1884215..1884254)
location: region:1869742-1884254:1
so has part: feature:1869742-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884254:1:exon

XP_038865105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1869742-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884254:1:exon

LOC120060100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog isoform X4
translation: MQSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNTPSITYDISQLFDFIHDLADLSCLVYRADSQTYQPMF
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869742..1869744,1873441..1873531,1874992..1875112,1884215..1884254)
location: region:1869742-1884254:1
so has part: feature:1869742-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1884215-1884254:1:exon

XP_038865106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1869742-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884215-1884254:1:exon

LOC120060100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog isoform X3
translation: MQSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNTPSITYDISQLFDFIHDLADLSCLVYRADSQTYQPMF
SIO_010081: LOC120060100
subclass of: SO_0000673
so part of: LOC120060100
location: join(1869742..1869744,1873441..1873531,1874992..1875112,1883883..1883922)
location: region:1869742-1883922:1
so has part: feature:1869742-1869744:1:exon
so has part: feature:1873441-1873531:1:exon
so has part: feature:1874992-1875112:1:exon
so has part: feature:1883883-1883922:1:exon

XP_038865102.1
type: Protein
SIO_000068: ncbiprotein

position:1883922:1
position: 1883922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869742-1869744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1873441-1873531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874992-1875112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883883-1883922:1:exon

LOC120060101
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1891976..1910462)
location: region:1891976-1910462:-1
so has part: feature:1891976-1910462:-1:exon
subclass of: SO_0000010

120060101
type: Gene
SIO_000068: ncbigene

position:1891976:-1
position: 1891976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910462:-1
position: 1910462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1891976-1910462:-1:exon

LOC120060101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060101
product: exonuclease 3'-5' domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039009179.1
SIO_010081: LOC120060101
subclass of: SO_0000673
so part of: LOC120060101
location: complement(join(1891976..1893749,1893955..1894151,1896255..1896417,1896780..1896915,1899935..1900041,1900330..1900634,1902673..1902799,1905221..1905348,1905479..1905607,1905815..1906329,1910349..1910462))
location: region:1891976-1910462:-1
so has part: feature:1910349-1910462:-1:exon
so has part: feature:1905815-1906329:-1:exon
so has part: feature:1905479-1905607:-1:exon
so has part: feature:1905221-1905348:-1:exon
so has part: feature:1902673-1902799:-1:exon
so has part: feature:1900330-1900634:-1:exon
so has part: feature:1899935-1900041:-1:exon
so has part: feature:1896780-1896915:-1:exon
so has part: feature:1896255-1896417:-1:exon
so has part: feature:1893955-1894151:-1:exon
so has part: feature:1891976-1893749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1910349-1910462:-1:exon

position:1910349:-1
position: 1910349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1905815-1906329:-1:exon

position:1905815:-1
position: 1905815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906329:-1
position: 1906329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1905479-1905607:-1:exon

position:1905479:-1
position: 1905479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905607:-1
position: 1905607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1905221-1905348:-1:exon

position:1905221:-1
position: 1905221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905348:-1
position: 1905348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1902673-1902799:-1:exon

position:1902673:-1
position: 1902673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902799:-1
position: 1902799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1900330-1900634:-1:exon

position:1900330:-1
position: 1900330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900634:-1
position: 1900634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1899935-1900041:-1:exon

position:1899935:-1
position: 1899935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900041:-1
position: 1900041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1896780-1896915:-1:exon

position:1896780:-1
position: 1896780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1896915:-1
position: 1896915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1896255-1896417:-1:exon

position:1896255:-1
position: 1896255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1896417:-1
position: 1896417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1893955-1894151:-1:exon

position:1893955:-1
position: 1893955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1894151:-1
position: 1894151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1891976-1893749:-1:exon

position:1893749:-1
position: 1893749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120060101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exonuclease 3'-5' domain-containing protein 2-like
translation: MATRQKALMVAVVTLLGATLGGLLLWRQPTLRTQKKKQCLAQGQIGVSTGPVPVEQLGPVVVEPVQTQLTLGQSLGLLSVSLPPADQVLAVQPVMVSSEEGWEQLWPSLQKELSVYPVLGLDCEWVSVKGKASAVSLLQMSSYSGLCVLVRLQLFRGSQQDLPLSLKEVLRDPHVLKVGVGCYEDGTRLTRDYGLALGCTVDLRYLALRQRKVVLNNGLSLKSLAADLLNVSLDKSMALRCSNWEADQLTLEQMTYAALDAQVSIALFFHLLGLYSDTTPSPDSGSGYTQLANRCQGLIDTPFRERGEGEDGERRRKSKKLRQPTLESSEIGDQQVPDPRKNNKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDKRKAQWYLDKELGVLQSDEPFIVRLLFEPSGRPESQQDYYLTAKKNMCVVCGKNESYIRKNIVPHEYRQHFPMEMKDHNSHDVLLLCTSCHAASTVHDGFLKQQLADEHGAPQGCEEGVRLLEDSDRRRVRSAARALLTVGEGLPEVRRDELQKVIKCFFNDMELSPETLQRAADLETRIFNESYVPHGLKVVKVKAEQGLKGLMVLESRWRQHFLSTMTPRYLPPHWSVSHNHDKLLRKYGDDLLIQLN
SIO_010081: LOC120060101
subclass of: SO_0000673
so part of: LOC120060101
location: complement(join(1893533..1893749,1893955..1894151,1896255..1896417,1896780..1896915,1899935..1900041,1900330..1900634,1902673..1902799,1905221..1905348,1905479..1905607,1905815..1906189))
location: region:1893533-1906189:-1
so has part: feature:1905815-1906189:-1:exon
so has part: feature:1905479-1905607:-1:exon
so has part: feature:1905221-1905348:-1:exon
so has part: feature:1902673-1902799:-1:exon
so has part: feature:1900330-1900634:-1:exon
so has part: feature:1899935-1900041:-1:exon
so has part: feature:1896780-1896915:-1:exon
so has part: feature:1896255-1896417:-1:exon
so has part: feature:1893955-1894151:-1:exon
so has part: feature:1893533-1893749:-1:exon

XP_038865107.1
type: Protein
SIO_000068: ncbiprotein

position:1893533:-1
position: 1893533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906189:-1
position: 1906189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1905815-1906189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1905479-1905607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1905221-1905348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902673-1902799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1900330-1900634:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1899935-1900041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1896780-1896915:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1896255-1896417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1893955-1894151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1893533-1893749:-1:exon

LOC120060102
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1915190..2018338)
location: region:1915190-2018338:-1
so has part: feature:1915190-2018338:-1:exon
subclass of: SO_0000010

120060102
type: Gene
SIO_000068: ncbigene

position:1915190:-1
position: 1915190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018338:-1
position: 2018338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1915190-2018338:-1:exon

LOC120060102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060102
product: protein numb homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_039009181.1
SIO_010081: LOC120060102
subclass of: SO_0000673
so part of: LOC120060102
location: complement(join(1915190..1917314,1917833..1917934,1921116..1921274,1922467..1922760,1922852..1923053,1984763..1984903,1987441..1987515,2010561..2010635,2018213..2018338))
location: region:1915190-2018338:-1
so has part: feature:2018213-2018338:-1:exon
so has part: feature:2010561-2010635:-1:exon
so has part: feature:1987441-1987515:-1:exon
so has part: feature:1984763-1984903:-1:exon
so has part: feature:1922852-1923053:-1:exon
so has part: feature:1922467-1922760:-1:exon
so has part: feature:1921116-1921274:-1:exon
so has part: feature:1917833-1917934:-1:exon
so has part: feature:1915190-1917314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018213-2018338:-1:exon

position:2018213:-1
position: 2018213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2010561-2010635:-1:exon

position:2010561:-1
position: 2010561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2010635:-1
position: 2010635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1987441-1987515:-1:exon

position:1987441:-1
position: 1987441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1987515:-1
position: 1987515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1984763-1984903:-1:exon

position:1984763:-1
position: 1984763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984903:-1
position: 1984903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1922852-1923053:-1:exon

position:1922852:-1
position: 1922852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923053:-1
position: 1923053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1922467-1922760:-1:exon

position:1922467:-1
position: 1922467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922760:-1
position: 1922760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1921116-1921274:-1:exon

position:1921116:-1
position: 1921116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921274:-1
position: 1921274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1917833-1917934:-1:exon

position:1917833:-1
position: 1917833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1917934:-1
position: 1917934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1915190-1917314:-1:exon

position:1917314:-1
position: 1917314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120060102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060102
product: protein numb homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_039009180.1
SIO_010081: LOC120060102
subclass of: SO_0000673
so part of: LOC120060102
location: complement(join(1915190..1917314,1917833..1917934,1921116..1921274,1922467..1922763,1922852..1923053,1984763..1984903,1987441..1987515,2010561..2010635,2018213..2018338))
location: region:1915190-2018338:-1
so has part: feature:2018213-2018338:-1:exon
so has part: feature:2010561-2010635:-1:exon
so has part: feature:1987441-1987515:-1:exon
so has part: feature:1984763-1984903:-1:exon
so has part: feature:1922852-1923053:-1:exon
so has part: feature:1922467-1922763:-1:exon
so has part: feature:1921116-1921274:-1:exon
so has part: feature:1917833-1917934:-1:exon
so has part: feature:1915190-1917314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018213-2018338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2010561-2010635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1987441-1987515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984763-1984903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1922852-1923053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1922467-1922763:-1:exon

position:1922763:-1
position: 1922763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1921116-1921274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1917833-1917934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1915190-1917314:-1:exon

LOC120060102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein numb homolog isoform X2
translation: MNKLRQSFRRKKDVYVPESSRPHQWQTDEEAVRSGKCSFAVKYLGHVEVEESRGMHICEDAVKQLKTAGKKAVRAVLWVSADGLRVVDDKTKDLILDQTIEKVSFCAPDRNFERAFSYICRDGTTRRWICHCFMAIKDSGERLSHSVGCAFAACLERKQRREKECGVTATFDSNRTTFTREGSFRVTTATEAAEREEVMRQLQDKKEGDVRPSIALSSGPSEGVVNQAVAPLPGPPSPSSSPPQGPQVIPRRHAPVEVLARQGSFRGFPALNNNSSPFKRQLSLRMNDLPSTMQRSSDFSMKNTVPEMEGEGDSISSLCTQIASAFSGPPEDPFSQAPMPRPTSSPQSPVAPPGAQPALPPPLPARDTNPWAKTPGHAGHHTPPTSSSAHPGGDWTTPVIVAPPSATSSPSHHSHRRTPSEADRWLEEVTKSVRTPQLGSTPPSQPFLTPNPPAFSIPPTQAFIVPMPSTQPFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPSNQAFPATLPPNQAFPATLPPNQAFPATLPSNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQPFPATLTPNQAFPATLPPNQPFSTPPSQAFSTPPSQAFSTPPSQAFSTPPSQPFSTPPSQAFSTPPSQAFSTPPSQAFAVPTPPTQEVAPVAFMSSLPPAIPMLPPRQPAYHTQAPASYPMSNGLPYAHPSVPVMGITPSQMVANVFGSATQPQAYPTPQPQAYPTPQPQAYPTPQYDPVQHTVCIPFSNPHQQPLPFQAPNGSVAFNGGGADSWAPPSLPPPSSPAPPLPPQPLATADPFEAKWAALESRSRQRTTPSPTNPFSSELHKTFEIQL
SIO_010081: LOC120060102
subclass of: SO_0000673
so part of: LOC120060102
location: complement(join(1915795..1917314,1917833..1917934,1921116..1921274,1922467..1922760,1922852..1923053,1984763..1984903,1987441..1987515,2010561..2010635,2018213..2018338))
location: region:1915795-2018338:-1
so has part: feature:2018213-2018338:-1:exon
so has part: feature:2010561-2010635:-1:exon
so has part: feature:1987441-1987515:-1:exon
so has part: feature:1984763-1984903:-1:exon
so has part: feature:1922852-1923053:-1:exon
so has part: feature:1922467-1922760:-1:exon
so has part: feature:1921116-1921274:-1:exon
so has part: feature:1917833-1917934:-1:exon
so has part: feature:1915795-1917314:-1:exon

XP_038865109.1
type: Protein
SIO_000068: ncbiprotein

position:1915795:-1
position: 1915795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018213-2018338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2010561-2010635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1987441-1987515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984763-1984903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1922852-1923053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1922467-1922760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1921116-1921274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1917833-1917934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1915795-1917314:-1:exon

LOC120060102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein numb homolog isoform X1
translation: MNKLRQSFRRKKDVYVPESSRPHQWQTDEEAVRSGKCSFAVKYLGHVEVEESRGMHICEDAVKQLKTAGKKAVRAVLWVSADGLRVVDDKTKDLILDQTIEKVSFCAPDRNFERAFSYICRDGTTRRWICHCFMAIKDSGERLSHSVGCAFAACLERKQRREKECGVTATFDSNRTTFTREGSFRVTTATEAAEREEVMRQLQDKKAEGDVRPSIALSSGPSEGVVNQAVAPLPGPPSPSSSPPQGPQVIPRRHAPVEVLARQGSFRGFPALNNNSSPFKRQLSLRMNDLPSTMQRSSDFSMKNTVPEMEGEGDSISSLCTQIASAFSGPPEDPFSQAPMPRPTSSPQSPVAPPGAQPALPPPLPARDTNPWAKTPGHAGHHTPPTSSSAHPGGDWTTPVIVAPPSATSSPSHHSHRRTPSEADRWLEEVTKSVRTPQLGSTPPSQPFLTPNPPAFSIPPTQAFIVPMPSTQPFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPSNQAFPATLPPNQAFPATLPPNQAFPATLPSNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQAFPATLPPNQPFPATLTPNQAFPATLPPNQPFSTPPSQAFSTPPSQAFSTPPSQAFSTPPSQPFSTPPSQAFSTPPSQAFSTPPSQAFAVPTPPTQEVAPVAFMSSLPPAIPMLPPRQPAYHTQAPASYPMSNGLPYAHPSVPVMGITPSQMVANVFGSATQPQAYPTPQPQAYPTPQPQAYPTPQYDPVQHTVCIPFSNPHQQPLPFQAPNGSVAFNGGGADSWAPPSLPPPSSPAPPLPPQPLATADPFEAKWAALESRSRQRTTPSPTNPFSSELHKTFEIQL
SIO_010081: LOC120060102
subclass of: SO_0000673
so part of: LOC120060102
location: complement(join(1915795..1917314,1917833..1917934,1921116..1921274,1922467..1922763,1922852..1923053,1984763..1984903,1987441..1987515,2010561..2010635,2018213..2018338))
location: region:1915795-2018338:-1
so has part: feature:2018213-2018338:-1:exon
so has part: feature:2010561-2010635:-1:exon
so has part: feature:1987441-1987515:-1:exon
so has part: feature:1984763-1984903:-1:exon
so has part: feature:1922852-1923053:-1:exon
so has part: feature:1922467-1922763:-1:exon
so has part: feature:1921116-1921274:-1:exon
so has part: feature:1917833-1917934:-1:exon
so has part: feature:1915795-1917314:-1:exon

XP_038865108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2018213-2018338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2010561-2010635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1987441-1987515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984763-1984903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1922852-1923053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1922467-1922763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1921116-1921274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1917833-1917934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1915795-1917314:-1:exon

LOC120060105
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1965884..2089538
location: region:1965884-2089538:1
so has part: feature:1965884-2089538:1:exon
subclass of: SO_0000010

120060105
type: Gene
SIO_000068: ncbigene

position:1965884:1
position: 1965884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089538:1
position: 2089538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1965884-2089538:1:exon

LOC120060105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060105
product: protein numb homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039009185.1
SIO_010081: LOC120060105
subclass of: SO_0000673
so part of: LOC120060105
location: join(1965884..1966193,2080814..2080949,2088606..2088680,2089430..2089538)
location: region:1965884-2089538:1
so has part: feature:1965884-1966193:1:exon
so has part: feature:2080814-2080949:1:exon
so has part: feature:2088606-2088680:1:exon
so has part: feature:2089430-2089538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1965884-1966193:1:exon

position:1966193:1
position: 1966193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2080814-2080949:1:exon

position:2080814:1
position: 2080814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080949:1
position: 2080949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2088606-2088680:1:exon

position:2088606:1
position: 2088606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2088680:1
position: 2088680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2089430-2089538:1:exon

position:2089430:1
position: 2089430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein numb homolog
translation: MNKLRQSFRRKKDVYVPESSRPHQWQTDEEAVRSGKCSFAVKYLGHVEVEESRGMHICEGAVKRLKTSLEVQTLPPVS
SIO_010081: LOC120060105
subclass of: SO_0000673
so part of: LOC120060105
location: join(2080824..2080949,2088606..2088680,2089430..2089465)
location: region:2080824-2089465:1
so has part: feature:2080824-2080949:1:exon
so has part: feature:2088606-2088680:1:exon
so has part: feature:2089430-2089465:1:exon

XP_038865113.1
type: Protein
SIO_000068: ncbiprotein

position:2080824:1
position: 2080824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089465:1
position: 2089465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2080824-2080949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2088606-2088680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089430-2089465:1:exon

map3k9
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: map3k9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2214352..2284709
location: region:2214352-2284709:1
so has part: feature:2214352-2284709:1:exon
subclass of: SO_0000010

120059721
type: Gene
SIO_000068: ncbigene

position:2214352:1
position: 2214352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2284709:1
position: 2284709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2214352-2284709:1:exon

map3k9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: map3k9
product: mitogen-activated protein kinase kinase kinase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_039008775.1
SIO_010081: map3k9
subclass of: SO_0000673
so part of: map3k9
location: join(2214352..2214784,2229068..2229285,2238588..2238783,2254896..2255076,2260106..2260254,2262642..2262817,2263094..2263334,2274727..2274855,2275401..2275521,2275778..2275890,2283113..2283988,2284114..2284709)
location: region:2214352-2284709:1
so has part: feature:2214352-2214784:1:exon
so has part: feature:2229068-2229285:1:exon
so has part: feature:2238588-2238783:1:exon
so has part: feature:2254896-2255076:1:exon
so has part: feature:2260106-2260254:1:exon
so has part: feature:2262642-2262817:1:exon
so has part: feature:2263094-2263334:1:exon
so has part: feature:2274727-2274855:1:exon
so has part: feature:2275401-2275521:1:exon
so has part: feature:2275778-2275890:1:exon
so has part: feature:2283113-2283988:1:exon
so has part: feature:2284114-2284709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2214352-2214784:1:exon

position:2214784:1
position: 2214784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2229068-2229285:1:exon

position:2229068:1
position: 2229068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2229285:1
position: 2229285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2238588-2238783:1:exon

position:2238588:1
position: 2238588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2238783:1
position: 2238783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2254896-2255076:1:exon

position:2254896:1
position: 2254896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2255076:1
position: 2255076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2260106-2260254:1:exon

position:2260106:1
position: 2260106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260254:1
position: 2260254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2262642-2262817:1:exon

position:2262642:1
position: 2262642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262817:1
position: 2262817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2263094-2263334:1:exon

position:2263094:1
position: 2263094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263334:1
position: 2263334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2274727-2274855:1:exon

position:2274727:1
position: 2274727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2274855:1
position: 2274855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2275401-2275521:1:exon

position:2275401:1
position: 2275401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2275521:1
position: 2275521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2275778-2275890:1:exon

position:2275778:1
position: 2275778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2275890:1
position: 2275890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2283113-2283988:1:exon

position:2283113:1
position: 2283113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283988:1
position: 2283988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2284114-2284709:1:exon

position:2284114:1
position: 2284114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

map3k9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: map3k9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 9
translation: MDASKPAFDNSPSPSGRYVSSPPDGVETEAFCWPENDTVAGTVGVDAPASGPGGPDLSGYWTAVFDYDAGAEDELSLRKGDLVEVLSKDSLVSGDEGWWTGLIEDRVGIFPSNYVSIGNGISEKIRDRDTSVKKYSDYAVPSLHLLEVDFSELTLEEIIGVGGFGKVYRAMWRGAEVAVKAARRDPDEEEGQILESVRQEAKLFAMLHHPNIMALLGVCLQEPTLCLVMEFARGGPLNRALSGKRIPPCTLVDWAVQIARAMHYLHCEAIVPVIHRDLKSSNILILEKVEMEDLTNKTLKITDFGLAREWHRTTKMSAAGTYAWMAPEVIRSSTFSKGSDVWSYGVLLWELLTGEVPFRGIDCLAVAYGVAMNKLSLPIPSTCPEPFARLMEDCWSPDPHLRPLFTSILDQLTTIEESGFFEMPVESFHSLQDDWKMEIQEMFDQLRVKEKELRSWEEELSRAALQQKSQEEELRRREQELAEREIHILERELNVIIHQLYQEKPRVESRQGKFRRSRLKLKDGNRISLPSDFQHKITVQASPSHDRCRSLLGSLSSPPTSPQAPLLPRLRAIQLTPGGEGCKGWGRLDEEEEKRGSRKKGRIKGSHREHSDDESIKVPQEGNRQRSCSAPNLRRSPRHSPAIPGVPSLTEMENEDCCYTTDPAGGANASPSQSYLCIPFHREGPVADGNAGGGGEYCPSYHSTPAPDTPPSRKSQAGRGRSELVLLGCGALLAAVGLGFNMMTLAQPGTGSGSGTEGAAESSKPPRWEGFFHRTGTGGQRRSTSPPTRKLFRRGGDKESPLKHSVAPVTERVGGGLFPSSLTLLSLSSVSDCNSTRSLLRSDSEELLVYRTASPQAPVQPSVQPHTSVHPQPQHASLNPLVNTHLESFKRHPRQSLTPTHLPSVPSSSRCLHRTPSDGAIKTRCPPNYIHPFPLPVRATPETTDGGLRGLSDHVSQVPRLPDPNLVFPPTPRRRCPPERPKTLDFLVRPRPSPRVRCDVFLGQSPGRGRGAGQGNGESPAHTTSTDTPPTVEFGRDMTVLPTPLEPPTPSPRRGHSLEAPTPSPRRGHPLLTHHMEPRDMEVLATPMEPPTPCSTSPRQRGDSLLDQQDEEQCLDPTLPLCKPESQFPKCSPYRYRPGFFS
SIO_010081: map3k9
subclass of: SO_0000673
so part of: map3k9
location: join(2214352..2214784,2229068..2229285,2238588..2238783,2254896..2255076,2260106..2260254,2262642..2262817,2263094..2263334,2274727..2274855,2275401..2275521,2275778..2275890,2283113..2283988,2284114..2284709)
location: region:2214352-2284709:1
so has part: feature:2214352-2214784:1:exon
so has part: feature:2229068-2229285:1:exon
so has part: feature:2238588-2238783:1:exon
so has part: feature:2254896-2255076:1:exon
so has part: feature:2260106-2260254:1:exon
so has part: feature:2262642-2262817:1:exon
so has part: feature:2263094-2263334:1:exon
so has part: feature:2274727-2274855:1:exon
so has part: feature:2275401-2275521:1:exon
so has part: feature:2275778-2275890:1:exon
so has part: feature:2283113-2283988:1:exon
so has part: feature:2284114-2284709:1:exon

XP_038864703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2214352-2214784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2229068-2229285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238588-2238783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2254896-2255076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2260106-2260254:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2262642-2262817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2263094-2263334:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2274727-2274855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2275401-2275521:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2275778-2275890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2283113-2283988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2284114-2284709:1:exon

LOC120059722
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2303490..2306731)
location: region:2303490-2306731:-1
so has part: feature:2303490-2306731:-1:exon
subclass of: SO_0000010

120059722
type: Gene
SIO_000068: ncbigene

position:2303490:-1
position: 2303490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306731:-1
position: 2306731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2303490-2306731:-1:exon

LOC120059722
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059722
product: tetratricopeptide repeat protein 9A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008776.1
SIO_010081: LOC120059722
subclass of: SO_0000673
so part of: LOC120059722
location: complement(join(2303490..2303620,2305083..2305265,2306254..2306731))
location: region:2303490-2306731:-1
so has part: feature:2306254-2306731:-1:exon
so has part: feature:2305083-2305265:-1:exon
so has part: feature:2303490-2303620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2306254-2306731:-1:exon

position:2306254:-1
position: 2306254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2305083-2305265:-1:exon

position:2305083:-1
position: 2305083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2305265:-1
position: 2305265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2303490-2303620:-1:exon

position:2303620:-1
position: 2303620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059722
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 9A-like
translation: MSVNQTGYDGISRVDGGTVTGGLNISSAPKLQQCAQPPANRPRDARHQQHSSRQHQHGGVPVKPPFSGRSEPADVVKRAIDFKTQGTQCYKDKKYREAIGKYHRALLEMKGLCRVLGDPEASSKSPSSVLPTITKPDSLTDEQKGAMENAELECYNSLAACLLQMELVNYERVKEYCLKVLRKEGDHFKALYRSGVAYYHLGDFHKALHYLKESHKQQPADTNVLRYIQLTEMKIRRSAQKEKKETT
SIO_010081: LOC120059722
subclass of: SO_0000673
so part of: LOC120059722
location: complement(join(2303538..2303620,2305083..2305265,2306254..2306731))
location: region:2303538-2306731:-1
so has part: feature:2306254-2306731:-1:exon
so has part: feature:2305083-2305265:-1:exon
so has part: feature:2303538-2303620:-1:exon

XP_038864704.1
type: Protein
SIO_000068: ncbiprotein

position:2303538:-1
position: 2303538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2306254-2306731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2305083-2305265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2303538-2303620:-1:exon

LOC120060104
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2332295..2335795)
location: region:2332295-2335795:-1
so has part: feature:2332295-2335795:-1:exon
subclass of: SO_0000010

120060104
type: Gene
SIO_000068: ncbigene

position:2332295:-1
position: 2332295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2335795:-1
position: 2335795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2332295-2335795:-1:exon

LOC120060104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060104
product: cathepsin K-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009184.1
SIO_010081: LOC120060104
subclass of: SO_0000673
so part of: LOC120060104
location: complement(join(2332295..2332569,2332818..2332960,2333481..2333582,2335292..2335347,2335679..2335795))
location: region:2332295-2335795:-1
so has part: feature:2335679-2335795:-1:exon
so has part: feature:2335292-2335347:-1:exon
so has part: feature:2333481-2333582:-1:exon
so has part: feature:2332818-2332960:-1:exon
so has part: feature:2332295-2332569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2335679-2335795:-1:exon

position:2335679:-1
position: 2335679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2335292-2335347:-1:exon

position:2335292:-1
position: 2335292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2335347:-1
position: 2335347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2333481-2333582:-1:exon

position:2333481:-1
position: 2333481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333582:-1
position: 2333582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2332818-2332960:-1:exon

position:2332818:-1
position: 2332818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2332960:-1
position: 2332960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2332295-2332569:-1:exon

position:2332569:-1
position: 2332569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120060104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin K-like
translation: MASERQDVDKEFEEWKEEHGKKYKSKEEEAKRKKIWLESRTRVIEHNKKYDSGESTYECGMNHMSDLEMHEVCCGGMRSCREEKNDS
SIO_010081: LOC120060104
subclass of: SO_0000673
so part of: LOC120060104
location: complement(join(2332507..2332569,2332818..2332960,2333481..2333538))
location: region:2332507-2333538:-1
so has part: feature:2333481-2333538:-1:exon
so has part: feature:2332818-2332960:-1:exon
so has part: feature:2332507-2332569:-1:exon

XP_038865112.1
type: Protein
SIO_000068: ncbiprotein

position:2332507:-1
position: 2332507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333538:-1
position: 2333538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2333481-2333538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2332818-2332960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332507-2332569:-1:exon

LOC120060106
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2349092..2355379)
location: region:2349092-2355379:-1
so has part: feature:2349092-2355379:-1:exon
subclass of: SO_0000010

120060106
type: Gene
SIO_000068: ncbigene

position:2349092:-1
position: 2349092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2355379:-1
position: 2355379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2349092-2355379:-1:exon

LOC120060106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060106
product: procathepsin L-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039009186.1
SIO_010081: LOC120060106
subclass of: SO_0000673
so part of: LOC120060106
location: complement(join(2349092..2349292,2350968..2351069,2351421..2351529,2352236..2352401,2353061..2353258,2353750..2353944,2354447..2354589,2355280..2355379))
location: region:2349092-2355379:-1
so has part: feature:2355280-2355379:-1:exon
so has part: feature:2354447-2354589:-1:exon
so has part: feature:2353750-2353944:-1:exon
so has part: feature:2353061-2353258:-1:exon
so has part: feature:2352236-2352401:-1:exon
so has part: feature:2351421-2351529:-1:exon
so has part: feature:2350968-2351069:-1:exon
so has part: feature:2349092-2349292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2355280-2355379:-1:exon

position:2355280:-1
position: 2355280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2354447-2354589:-1:exon

position:2354447:-1
position: 2354447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354589:-1
position: 2354589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2353750-2353944:-1:exon

position:2353750:-1
position: 2353750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353944:-1
position: 2353944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2353061-2353258:-1:exon

position:2353061:-1
position: 2353061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353258:-1
position: 2353258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2352236-2352401:-1:exon

position:2352236:-1
position: 2352236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352401:-1
position: 2352401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2351421-2351529:-1:exon

position:2351421:-1
position: 2351421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2351529:-1
position: 2351529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2350968-2351069:-1:exon

position:2350968:-1
position: 2350968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2351069:-1
position: 2351069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2349092-2349292:-1:exon

position:2349292:-1
position: 2349292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120060106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procathepsin L-like
translation: MKLLVVVAAALAVASAASFSLEDLEFHAWKLKFGKSYSSQVEEAQRRSSWISNRKLVVVHNMLADKGIKSYRLGMTYFADMDNEEYRRVISQGCLGSFNASKARGSTFFPMLGDNDLPTTVDWRDKGYVTPIKDQKQCGSCWAFSATGSLEGQYYKKTNKLVSLSEQQLVDCSGDFGNMGCMGGLMDQAFEYIKSLAPGGVDTEDSYPYQAEDKTCRYKPDSVGATCSGFVDVTSGDESALQQAVATVGPVSVAIDAAHSSFQLYDSGVYDEPECSSDDLDHGVLAVGYGTSDDGQDYWLVKNSWGLEWGDKGYIMMSRNKHNQCGIATASSYPLV
SIO_010081: LOC120060106
subclass of: SO_0000673
so part of: LOC120060106
location: complement(join(2350970..2351069,2351421..2351529,2352236..2352401,2353061..2353258,2353750..2353944,2354447..2354589,2355280..2355379))
location: region:2350970-2355379:-1
so has part: feature:2355280-2355379:-1:exon
so has part: feature:2354447-2354589:-1:exon
so has part: feature:2353750-2353944:-1:exon
so has part: feature:2353061-2353258:-1:exon
so has part: feature:2352236-2352401:-1:exon
so has part: feature:2351421-2351529:-1:exon
so has part: feature:2350970-2351069:-1:exon

XP_038865114.1
type: Protein
SIO_000068: ncbiprotein

position:2350970:-1
position: 2350970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2355280-2355379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354447-2354589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2353750-2353944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2353061-2353258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2352236-2352401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2351421-2351529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2350970-2351069:-1:exon

LOC120059723
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2365802..2374281)
location: region:2365802-2374281:-1
so has part: feature:2365802-2374281:-1:exon
subclass of: SO_0000010

120059723
type: Gene
SIO_000068: ncbigene

position:2365802:-1
position: 2365802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2374281:-1
position: 2374281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365802-2374281:-1:exon

LOC120059723
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059723
product: transcription cofactor vestigial-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008778.1
SIO_010081: LOC120059723
subclass of: SO_0000673
so part of: LOC120059723
location: complement(join(2365802..2366259,2368490..2368805,2374195..2374281))
location: region:2365802-2374281:-1
so has part: feature:2374195-2374281:-1:exon
so has part: feature:2368490-2368805:-1:exon
so has part: feature:2365802-2366259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2374195-2374281:-1:exon

position:2374195:-1
position: 2374195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2368490-2368805:-1:exon

position:2368490:-1
position: 2368490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2368805:-1
position: 2368805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2365802-2366259:-1:exon

position:2366259:-1
position: 2366259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059723
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 2
translation: MSCLDVMYPVYGHYAPYAPATPAFINNFQAPVGLRSTSPRRRDFMMESRGTQRGVGGVSAGPGSSSSSYPSATRPEEGPKEKQEVPEAEYLTSRCILFTYYQGDISSVVDEHFSRALSSYMEGEGKRRALDLGTDTPSPSSRHRFPPSFWDSNYPSPQCRSRCEHRAPTYSMDPYASGLHPGLPHPHTHPHSHLHPAEGWGYAQGQAYGAPRPLHELYSPSGLEPHHSYGPLLMPTVRPSHLGTLPGHHPYDISKLDPTAPWPGLLPPGEMAINMDAGMEPLLYYS
SIO_010081: LOC120059723
subclass of: SO_0000673
so part of: LOC120059723
location: complement(join(2365802..2366259,2368490..2368805,2374195..2374281))
location: region:2365802-2374281:-1
so has part: feature:2374195-2374281:-1:exon
so has part: feature:2368490-2368805:-1:exon
so has part: feature:2365802-2366259:-1:exon

XP_038864706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2374195-2374281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2368490-2368805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2365802-2366259:-1:exon

LOC120060103
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2390554..2401847
location: region:2390554-2401847:1
so has part: feature:2390554-2401847:1:exon
subclass of: SO_0000010

120060103
type: Gene
SIO_000068: ncbigene

position:2390554:1
position: 2390554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401847:1
position: 2401847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2390554-2401847:1:exon

LOC120060103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060103
product: YTH domain-containing family protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009183.1
SIO_010081: LOC120060103
subclass of: SO_0000673
so part of: LOC120060103
location: join(2390554..2390774,2390986..2391010,2392380..2392459,2393087..2394715,2398673..2398741,2400901..2401847)
location: region:2390554-2401847:1
so has part: feature:2390554-2390774:1:exon
so has part: feature:2390986-2391010:1:exon
so has part: feature:2392380-2392459:1:exon
so has part: feature:2393087-2394715:1:exon
so has part: feature:2398673-2398741:1:exon
so has part: feature:2400901-2401847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2390554-2390774:1:exon

position:2390774:1
position: 2390774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2390986-2391010:1:exon

position:2390986:1
position: 2390986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2391010:1
position: 2391010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2392380-2392459:1:exon

position:2392380:1
position: 2392380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2392459:1
position: 2392459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2393087-2394715:1:exon

position:2393087:1
position: 2393087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394715:1
position: 2394715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2398673-2398741:1:exon

position:2398673:1
position: 2398673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398741:1
position: 2398741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2400901-2401847:1:exon

position:2400901:1
position: 2400901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: YTH domain-containing family protein 2-like
translation: MSASSLLEQRPKGQGNKVQNGAVTQKVTLNDDEFEPYLNPQARQSNAYTAMSDSYMPSYYSPSIGFSYSLNEAAWSTGGDPPMPYLTSYGQLSNGEHHFLPDPMFGQPGPLGSNPFLGQHSFNFFPSSMDFSAWGNNSSQGQSTQNSGYSSSYAYAPSSLGGAMIDGQSPFAQNEPLNKAPGMNSLDQGMAGLKIGGGDMGAPKVVGSGLPRGPLGHSQVSGGAPSMPLPPVSIAPAKPASWADIASKPAKPQPKLKTKGGIAGTNLPPPPIKHNMDIGTWDNKGTMPKASTPQQAPLPSNGQPPNQGSPQPGTMAGGTPQLPLSNGQLVASSAQLGQHQFPPNGQLQLSQGPPPTNQPSQPTRWVPPRNRANGFGDAVGGAGQSPPNSGLGGVLVPSEPHPVLEKLRLVNNYNPKDFDWNLKQGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSLGAKGPLYLLFSVNGSGHFCGVAEMRSPVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLDKARQVLKIIAGYKHTTSIFDDFSHYEKRQEEEDCVKKVEVQGSEPYPSNPNPSRSHYRLQERQGRVK
SIO_010081: LOC120060103
subclass of: SO_0000673
so part of: LOC120060103
location: join(2390748..2390774,2390986..2391010,2392380..2392459,2393087..2394715,2398673..2398741,2400901..2400924)
location: region:2390748-2400924:1
so has part: feature:2390748-2390774:1:exon
so has part: feature:2390986-2391010:1:exon
so has part: feature:2392380-2392459:1:exon
so has part: feature:2393087-2394715:1:exon
so has part: feature:2398673-2398741:1:exon
so has part: feature:2400901-2400924:1:exon

XP_038865111.1
type: Protein
SIO_000068: ncbiprotein

position:2390748:1
position: 2390748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400924:1
position: 2400924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2390748-2390774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390986-2391010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2392380-2392459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393087-2394715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398673-2398741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2400901-2400924:1:exon

LOC120059724
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2452027..2457523
location: region:2452027-2457523:1
so has part: feature:2452027-2457523:1:exon
subclass of: SO_0000010

120059724
type: Gene
SIO_000068: ncbigene

position:2452027:1
position: 2452027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457523:1
position: 2457523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452027-2457523:1:exon

LOC120059724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059724
product: rab11 family-interacting protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008779.1
SIO_010081: LOC120059724
subclass of: SO_0000673
so part of: LOC120059724
location: join(2452027..2452052,2455633..2455774,2457118..2457523)
location: region:2452027-2457523:1
so has part: feature:2452027-2452052:1:exon
so has part: feature:2455633-2455774:1:exon
so has part: feature:2457118-2457523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2452027-2452052:1:exon

position:2452052:1
position: 2452052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2455633-2455774:1:exon

position:2455633:1
position: 2455633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455774:1
position: 2455774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2457118-2457523:1:exon

position:2457118:1
position: 2457118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120059724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab11 family-interacting protein 5-like
translation: MDMGGDLGHPHPVKPLTPEEKRRAELSEGRSVLDKLKSSIHSGRSSQPTNQQPEKKSLTEGAGPYYHLTHSELVALLLQREADLHRQRAEFDQQGALLAKREAELKKMKPQVRDLEDYIDTLLVRIMEQTPIILQVGTKLK
SIO_010081: LOC120059724
subclass of: SO_0000673
so part of: LOC120059724
location: join(2452027..2452052,2455633..2455774,2457118..2457375)
location: region:2452027-2457375:1
so has part: feature:2452027-2452052:1:exon
so has part: feature:2455633-2455774:1:exon
so has part: feature:2457118-2457375:1:exon

XP_038864707.1
type: Protein
SIO_000068: ncbiprotein

position:2457375:1
position: 2457375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452027-2452052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2455633-2455774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2457118-2457375:1:exon

LOC120059725
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2514391..2526299)
location: region:2514391-2526299:-1
so has part: feature:2514391-2526299:-1:exon
subclass of: SO_0000010

120059725
type: Gene
SIO_000068: ncbigene

position:2514391:-1
position: 2514391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2526299:-1
position: 2526299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2514391-2526299:-1:exon

LOC120059725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059725
product: homeobox protein EMX1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_039008780.1
SIO_010081: LOC120059725
subclass of: SO_0000673
so part of: LOC120059725
location: complement(join(2514391..2514549,2522119..2522303,2525954..2526299))
location: region:2514391-2526299:-1
so has part: feature:2525954-2526299:-1:exon
so has part: feature:2522119-2522303:-1:exon
so has part: feature:2514391-2514549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2525954-2526299:-1:exon

position:2525954:-1
position: 2525954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2522119-2522303:-1:exon

position:2522119:-1
position: 2522119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2522303:-1
position: 2522303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2514391-2514549:-1:exon

position:2514549:-1
position: 2514549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein EMX1-like
translation: MFSSVNKRCFMIESLVAKENPQTTEDLIQPTALTYSNPTDAFMNGYQSPTGRSLYQNPELVFPESVNHPGLTMNPHQLGGCHLQHTAHFFGTEHRDPLNFYPWDLRNRFFGYRFQGNDVSQESLLLHRPFARKPKRIRTAFSRSQLLRLERAFENNHYVVGAERKQLSNSLSLSETQVKVWFQNRRTKYKRQKMEGPDCHQKKKGNHHINRWRLLTKQGISEDIDVGLD
SIO_010081: LOC120059725
subclass of: SO_0000673
so part of: LOC120059725
location: complement(join(2514391..2514549,2522119..2522303,2525954..2526299))
location: region:2514391-2526299:-1
so has part: feature:2525954-2526299:-1:exon
so has part: feature:2522119-2522303:-1:exon
so has part: feature:2514391-2514549:-1:exon

XP_038864708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2525954-2526299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2522119-2522303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514391-2514549:-1:exon

LOC120059727
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2616768..2664211)
location: region:2616768-2664211:-1
so has part: feature:2616768-2664211:-1:exon
subclass of: SO_0000010

120059727
type: Gene
SIO_000068: ncbigene

position:2616768:-1
position: 2616768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664211:-1
position: 2664211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2616768-2664211:-1:exon

LOC120059727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059727
product: rab11 family-interacting protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039008781.1
SIO_010081: LOC120059727
subclass of: SO_0000673
so part of: LOC120059727
location: complement(join(2616768..2617282,2624210..2624727,2663658..2664211))
location: region:2616768-2664211:-1
so has part: feature:2663658-2664211:-1:exon
so has part: feature:2624210-2624727:-1:exon
so has part: feature:2616768-2617282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2663658-2664211:-1:exon

position:2663658:-1
position: 2663658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2624210-2624727:-1:exon

position:2624210:-1
position: 2624210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624727:-1
position: 2624727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2616768-2617282:-1:exon

position:2617282:-1
position: 2617282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab11 family-interacting protein 5-like
translation: MSSLNIDDEDQRWVPTHVQVTVLRGRGLRAKGKHGTSDVYTIIQVGKEKYSTCVLEKTTAPEWKEECSFELLPGVLEQVGDGGAYPPGSSDLVLTVMHRALIGLDVFLGQAVIPLDKVFQDRICMKNEWYKLNSKTGKKEKERGDIQVTVQFTKNNLTASMYDLSLGKDKPRSTFGKIKDRIKGKKRSSKDSDEDSASTIVSGYGPVSRMRNRLPSDGGGEEDYEDDEGGEGRRSKMRNFFLRGKLRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNFTADSPEHTAESSPKLASYTCEFTDESGEINIPVPQPVCINGSHVYNTTLDPCPGNPVIPLDPLALVKKNLPLSQSLQNLNQQREELPVLLPKGPAADGRRWSFDKAGKEEKVAIAAALEQAGQGMVEGAREESDRDNQGRKRSRNCLDESEQASNSDSGEKHKGWFGSKDNHSKPR
SIO_010081: LOC120059727
subclass of: SO_0000673
so part of: LOC120059727
location: complement(join(2616768..2617282,2624210..2624727,2663658..2664040))
location: region:2616768-2664040:-1
so has part: feature:2663658-2664040:-1:exon
so has part: feature:2624210-2624727:-1:exon
so has part: feature:2616768-2617282:-1:exon

XP_038864709.1
type: Protein
SIO_000068: ncbiprotein

position:2664040:-1
position: 2664040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2663658-2664040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2624210-2624727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2616768-2617282:-1:exon

LOC120060108
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2733901..2749149
location: region:2733901-2749149:1
so has part: feature:2733901-2749149:1:exon
subclass of: SO_0000010

120060108
type: Gene
SIO_000068: ncbigene

position:2733901:1
position: 2733901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2749149:1
position: 2749149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2733901-2749149:1:exon

LOC120060108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060108
product: cell surface glycoprotein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039009187.1
SIO_010081: LOC120060108
subclass of: SO_0000673
so part of: LOC120060108
location: join(2733901..2734064,2735276..2735358,2744095..2744165,2744272..2744400,2744797..2744974,2745272..2745996,2747968..2749149)
location: region:2733901-2749149:1
so has part: feature:2733901-2734064:1:exon
so has part: feature:2735276-2735358:1:exon
so has part: feature:2744095-2744165:1:exon
so has part: feature:2744272-2744400:1:exon
so has part: feature:2744797-2744974:1:exon
so has part: feature:2745272-2745996:1:exon
so has part: feature:2747968-2749149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2733901-2734064:1:exon

position:2734064:1
position: 2734064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2735276-2735358:1:exon

position:2735276:1
position: 2735276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2735358:1
position: 2735358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2744095-2744165:1:exon

position:2744095:1
position: 2744095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744165:1
position: 2744165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2744272-2744400:1:exon

position:2744272:1
position: 2744272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744400:1
position: 2744400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2744797-2744974:1:exon

position:2744797:1
position: 2744797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744974:1
position: 2744974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2745272-2745996:1:exon

position:2745272:1
position: 2745272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2745996:1
position: 2745996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2747968-2749149:1:exon

position:2747968:1
position: 2747968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120060108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell surface glycoprotein 1-like
translation: MSSFTREKLSLHLRRRMGVFVSRVKATELMANLPCLTLSDKEEIQAKKDFSGNYAAMQLLLDYVQKRMNWPEELISGLETLEHQDLAEELRAEWNKHNQNNPYPPSAAATTAVRTHVHPIPSTSSEGSPYSLVLPAHPAPPAVSAPLAVAPPEASLPPEVAPEVLPPPVVAAQPEAPPSSVPEAPVAGSSSEPASHAPEAAVSPDIASEAAPSPVAAPQAAPPSPVSADEPTGISEPPASSQPGPIDVVSLEDNSSHSDAPTQIALSETTPTLSGSDLIPAVTEITPTLPVSHLALSQTESTPAALATFQSPERRPVQDTSPHTVNETTFHQEAVEDSDPTQVTEDDRHTEPPQIQPFSAATAPPPVDTSMNEDDVNFSKPEVLRSEVMDSQPYSGDSTRLQMSVSDLVLATADVNSPVVVPDAVTSSTPLPCQENGVPEEITEPLSHNEPQEDTYESPCMSSLGDQEVLLNVVHVSEDASIQNNDGQTPSMLGIVVHVSEEPCIWNQDGQTQSMLGNNDVGVSETPPPVQNHNSQSQITPLSGSTALDLSSGPNQHGQSQGLIMIVNGQDASPSTKHPDAPAPTGFVPIVNGSSSAENRHPLGPMGAEVLMEARAVPELKQERAMGESYYLLGAAVVAVSALFMAWRMKN
SIO_010081: LOC120060108
subclass of: SO_0000673
so part of: LOC120060108
location: join(2744278..2744400,2744797..2744974,2745272..2745996,2747968..2748897)
location: region:2744278-2748897:1
so has part: feature:2744278-2744400:1:exon
so has part: feature:2744797-2744974:1:exon
so has part: feature:2745272-2745996:1:exon
so has part: feature:2747968-2748897:1:exon

XP_038865115.1
type: Protein
SIO_000068: ncbiprotein

position:2744278:1
position: 2744278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2748897:1
position: 2748897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2744278-2744400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2744797-2744974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745272-2745996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747968-2748897:1:exon

loxl3b
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: loxl3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2813505..2876066
location: region:2813505-2876066:1
so has part: feature:2813505-2876066:1:exon
subclass of: SO_0000010

120059728
type: Gene
SIO_000068: ncbigene

position:2813505:1
position: 2813505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876066:1
position: 2876066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2813505-2876066:1:exon

loxl3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: loxl3b
product: lysyl oxidase-like 3b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008782.1
SIO_010081: loxl3b
subclass of: SO_0000673
so part of: loxl3b
location: join(2813505..2813829,2814720..2814883,2824150..2824361,2844417..2844517,2844698..2844804,2844968..2845148,2847340..2847494,2853388..2853558,2855580..2855735,2860873..2860936,2861122..2861217,2868812..2869055,2870878..2870993,2871718..2871854,2872138..2872249,2875810..2876066)
location: region:2813505-2876066:1
so has part: feature:2813505-2813829:1:exon
so has part: feature:2814720-2814883:1:exon
so has part: feature:2824150-2824361:1:exon
so has part: feature:2844417-2844517:1:exon
so has part: feature:2844698-2844804:1:exon
so has part: feature:2844968-2845148:1:exon
so has part: feature:2847340-2847494:1:exon
so has part: feature:2853388-2853558:1:exon
so has part: feature:2855580-2855735:1:exon
so has part: feature:2860873-2860936:1:exon
so has part: feature:2861122-2861217:1:exon
so has part: feature:2868812-2869055:1:exon
so has part: feature:2870878-2870993:1:exon
so has part: feature:2871718-2871854:1:exon
so has part: feature:2872138-2872249:1:exon
so has part: feature:2875810-2876066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2813505-2813829:1:exon

position:2813829:1
position: 2813829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2814720-2814883:1:exon

position:2814720:1
position: 2814720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814883:1
position: 2814883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2824150-2824361:1:exon

position:2824150:1
position: 2824150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824361:1
position: 2824361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2844417-2844517:1:exon

position:2844417:1
position: 2844417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844517:1
position: 2844517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2844698-2844804:1:exon

position:2844698:1
position: 2844698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844804:1
position: 2844804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2844968-2845148:1:exon

position:2844968:1
position: 2844968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2845148:1
position: 2845148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2847340-2847494:1:exon

position:2847340:1
position: 2847340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847494:1
position: 2847494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2853388-2853558:1:exon

position:2853388:1
position: 2853388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2853558:1
position: 2853558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2855580-2855735:1:exon

position:2855580:1
position: 2855580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855735:1
position: 2855735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2860873-2860936:1:exon

position:2860873:1
position: 2860873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860936:1
position: 2860936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2861122-2861217:1:exon

position:2861122:1
position: 2861122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2861217:1
position: 2861217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2868812-2869055:1:exon

position:2868812:1
position: 2868812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869055:1
position: 2869055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2870878-2870993:1:exon

position:2870878:1
position: 2870878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2870993:1
position: 2870993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2871718-2871854:1:exon

position:2871718:1
position: 2871718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871854:1
position: 2871854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2872138-2872249:1:exon

position:2872138:1
position: 2872138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872249:1
position: 2872249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2875810-2876066:1:exon

position:2875810:1
position: 2875810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

loxl3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: loxl3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysyl oxidase homolog 3B
translation: MKTSRWWQQCSVISFLLAVWLPAWIMAQTTPPTQGTTSPKPQNDRLQFRLVGYPRKHNEGRIEVFYKGEWGTICDDDFSLSNANVLCRQLGFVSATGWTHSAKYGKGLGKIWLDNVQCNGGEKSIELCKSRGWGNSDCTHDEDAGVVCKDERLPGFVDSNIIDVQVDENKVEKVRLRPVVSTKKMPVTEGVVEIKYKNGWAQICDVGWTPKNTRVICGMLGFPHEKKINKNFYKLNTERQKNQYRFHSVACVGTEVHLAACPLEFNKGNATGSCKGGMPAVVSCVPGPQYVHNNGLKKNLKTTSTVRLKGGAKLGEGRVEVLRNNEWGTVCDDRWTLLSASVVCRELGFGSAKEALTGARMGQGMGPIHMNEVQCLGTEKSMWNCGFKNITSEDCQHVEDAAVRCNTPYMDLEKSIRLTGGRTRYEGRVEVLSTKANGTKSWGLICGGTWGTKEAMVACRQLGLGYANHGLQVRIVGGRTYYEGRVEVQVGARWGTVCSASWTTKEAMVVCRQLGLGYSMHAITETWYWDSSNVTEMVMSGVKCSGNEMSLSHCQHHRTVSCQKTAAKFSAGVICSETASDLVLNAPLVQQSVYIEDRPLHMLYCAAEENCLSQSAASANWPYGHRRLLRFSSQIHNIGRADFRPKAGRHSWVWHACHGHYHSMDIFTHYDLLSSNGTKVAEGHKASFCLEDTECHEGISKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDIKPGNYILQIVINPNFEVAESDFTNNAMKCNCKYDGHRIWLHNCHMGDAFSEEAERRFEKYPGQFNNQIS
SIO_010081: loxl3b
subclass of: SO_0000673
so part of: loxl3b
location: join(2813505..2813829,2814720..2814883,2824150..2824361,2844417..2844517,2844698..2844804,2844968..2845148,2847340..2847494,2853388..2853558,2855580..2855735,2860873..2860936,2861122..2861217,2868812..2869055,2870878..2870993,2871718..2871854,2872138..2872249,2875810..2875883)
location: region:2813505-2875883:1
so has part: feature:2813505-2813829:1:exon
so has part: feature:2814720-2814883:1:exon
so has part: feature:2824150-2824361:1:exon
so has part: feature:2844417-2844517:1:exon
so has part: feature:2844698-2844804:1:exon
so has part: feature:2844968-2845148:1:exon
so has part: feature:2847340-2847494:1:exon
so has part: feature:2853388-2853558:1:exon
so has part: feature:2855580-2855735:1:exon
so has part: feature:2860873-2860936:1:exon
so has part: feature:2861122-2861217:1:exon
so has part: feature:2868812-2869055:1:exon
so has part: feature:2870878-2870993:1:exon
so has part: feature:2871718-2871854:1:exon
so has part: feature:2872138-2872249:1:exon
so has part: feature:2875810-2875883:1:exon

XP_038864710.1
type: Protein
SIO_000068: ncbiprotein

position:2875883:1
position: 2875883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2813505-2813829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2814720-2814883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2824150-2824361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2844417-2844517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2844698-2844804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2844968-2845148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2847340-2847494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2853388-2853558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2855580-2855735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2860873-2860936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2861122-2861217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2868812-2869055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2870878-2870993:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2871718-2871854:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2872138-2872249:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2875810-2875883:1:exon

si:dkey-33c12.3
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: si:dkey-33c12.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2907977..2911461
location: region:2907977-2911461:1
so has part: feature:2907977-2911461:1:exon
subclass of: SO_0000010

120059729
type: Gene
SIO_000068: ncbigene

position:2907977:1
position: 2907977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911461:1
position: 2911461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907977-2911461:1:exon

si:dkey-33c12.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: si:dkey-33c12.3
product: uncharacterized protein LOC335380 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039008783.1
SIO_010081: si:dkey-33c12.3
subclass of: SO_0000673
so part of: si:dkey-33c12.3
location: join(2907977..2909142,2911333..2911461)
location: region:2907977-2911461:1
so has part: feature:2907977-2909142:1:exon
so has part: feature:2911333-2911461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2907977-2909142:1:exon

position:2909142:1
position: 2909142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2911333-2911461:1:exon

position:2911333:1
position: 2911333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-33c12.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: si:dkey-33c12.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofilament light polypeptide
translation: MSYDPYISYRHTWDSYRGSSRPSTTKSLMYSSLYSSSSSRALGLAAGKQRTLRPPASSSLPDASARMDLAQASSLNTELLGLRSQEKEQLVGLNDRFATYIDKVRRLEQQNRALLAELEALRRRQRDPSRLQGLYEGEARSLRAAIDQKTGDKMRMEAERDYLRDVYGQLKERYEEEAQCRADAEEALQRAREEVGRAMLSNCDAEASVVSLAEEMGFLKKVFVEEQAELQSQVVAANVFVDMEVSRPDLSAALKEIRAQYERLANKNMQAAEDWYRGKFESVAEMASKNNEAVRSIREETMEYRRLLQSRSSEIEALRNVIESLNKQLEELEEHQGKEVTKYQVRINDLECDINEAKQEMARYLREYQDLLNVKMALDIEIAAYR
SIO_010081: si:dkey-33c12.3
subclass of: SO_0000673
so part of: si:dkey-33c12.3
location: join(2908111..2909142,2911333..2911461)
location: region:2908111-2911461:1
so has part: feature:2908111-2909142:1:exon
so has part: feature:2911333-2911461:1:exon

XP_038864711.1
type: Protein
SIO_000068: ncbiprotein

position:2908111:1
position: 2908111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2908111-2909142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2911333-2911461:1:exon

si:dkey-33c12.4
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: si:dkey-33c12.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2931577..2997549)
location: region:2931577-2997549:-1
so has part: feature:2931577-2997549:-1:exon
subclass of: SO_0000010

120060109
type: Gene
SIO_000068: ncbigene

position:2931577:-1
position: 2931577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2997549:-1
position: 2997549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2931577-2997549:-1:exon

si:dkey-33c12.4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: si:dkey-33c12.4
product: uncharacterized protein LOC560112 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039009191.1
SIO_010081: si:dkey-33c12.4
subclass of: SO_0000673
so part of: si:dkey-33c12.4
location: complement(join(2931577..2933714,2936263..2936366,2944972..2945074,2951332..2951406,2959345..2959564,2960336..2960426,2962134..2962238,2965064..2965205,2970486..2970576,2970827..2970881,2985143..2985385,2988368..2988409,2991331..2991414,2991510..2991700,2993760..2993835,2996935..2996978,2997352..2997549))
location: region:2931577-2997549:-1
so has part: feature:2997352-2997549:-1:exon
so has part: feature:2996935-2996978:-1:exon
so has part: feature:2993760-2993835:-1:exon
so has part: feature:2991510-2991700:-1:exon
so has part: feature:2991331-2991414:-1:exon
so has part: feature:2988368-2988409:-1:exon
so has part: feature:2985143-2985385:-1:exon
so has part: feature:2970827-2970881:-1:exon
so has part: feature:2970486-2970576:-1:exon
so has part: feature:2965064-2965205:-1:exon
so has part: feature:2962134-2962238:-1:exon
so has part: feature:2960336-2960426:-1:exon
so has part: feature:2959345-2959564:-1:exon
so has part: feature:2951332-2951406:-1:exon
so has part: feature:2944972-2945074:-1:exon
so has part: feature:2936263-2936366:-1:exon
so has part: feature:2931577-2933714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2997352-2997549:-1:exon

position:2997352:-1
position: 2997352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2996935-2996978:-1:exon

position:2996935:-1
position: 2996935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2996978:-1
position: 2996978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2993760-2993835:-1:exon

position:2993760:-1
position: 2993760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993835:-1
position: 2993835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2991510-2991700:-1:exon

position:2991510:-1
position: 2991510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2991700:-1
position: 2991700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2991331-2991414:-1:exon

position:2991331:-1
position: 2991331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2991414:-1
position: 2991414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2988368-2988409:-1:exon

position:2988368:-1
position: 2988368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2988409:-1
position: 2988409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2985143-2985385:-1:exon

position:2985143:-1
position: 2985143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985385:-1
position: 2985385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2970827-2970881:-1:exon

position:2970827:-1
position: 2970827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970881:-1
position: 2970881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2970486-2970576:-1:exon

position:2970486:-1
position: 2970486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970576:-1
position: 2970576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2965064-2965205:-1:exon

position:2965064:-1
position: 2965064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2965205:-1
position: 2965205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2962134-2962238:-1:exon

position:2962134:-1
position: 2962134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962238:-1
position: 2962238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2960336-2960426:-1:exon

position:2960336:-1
position: 2960336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960426:-1
position: 2960426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2959345-2959564:-1:exon

position:2959345:-1
position: 2959345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2959564:-1
position: 2959564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2951332-2951406:-1:exon

position:2951332:-1
position: 2951332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951406:-1
position: 2951406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2944972-2945074:-1:exon

position:2944972:-1
position: 2944972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2945074:-1
position: 2945074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2936263-2936366:-1:exon

position:2936263:-1
position: 2936263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2936366:-1
position: 2936366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2931577-2933714:-1:exon

position:2933714:-1
position: 2933714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:dkey-33c12.4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: si:dkey-33c12.4
product: uncharacterized protein LOC560112 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039009189.1
SIO_010081: si:dkey-33c12.4
subclass of: SO_0000673
so part of: si:dkey-33c12.4
location: complement(join(2931577..2933714,2936263..2936366,2944972..2945074,2951332..2951406,2959345..2959519,2960336..2960426,2962134..2962238,2965064..2965205,2970486..2970576,2970827..2970881,2971025..2971333,2985143..2985385,2988368..2988409,2991331..2991414,2991510..2991700,2993760..2993835,2996935..2996978,2997352..2997549))
location: region:2931577-2997549:-1
so has part: feature:2997352-2997549:-1:exon
so has part: feature:2996935-2996978:-1:exon
so has part: feature:2993760-2993835:-1:exon
so has part: feature:2991510-2991700:-1:exon
so has part: feature:2991331-2991414:-1:exon
so has part: feature:2988368-2988409:-1:exon
so has part: feature:2985143-2985385:-1:exon
so has part: feature:2971025-2971333:-1:exon
so has part: feature:2970827-2970881:-1:exon
so has part: feature:2970486-2970576:-1:exon
so has part: feature:2965064-2965205:-1:exon
so has part: feature:2962134-2962238:-1:exon
so has part: feature:2960336-2960426:-1:exon
so has part: feature:2959345-2959519:-1:exon
so has part: feature:2951332-2951406:-1:exon
so has part: feature:2944972-2945074:-1:exon
so has part: feature:2936263-2936366:-1:exon
so has part: feature:2931577-2933714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2997352-2997549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2996935-2996978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2993760-2993835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2991510-2991700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2991331-2991414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2988368-2988409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985143-2985385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2971025-2971333:-1:exon

position:2971025:-1
position: 2971025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971333:-1
position: 2971333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2970827-2970881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2970486-2970576:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2965064-2965205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2962134-2962238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2960336-2960426:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2959345-2959519:-1:exon

position:2959519:-1
position: 2959519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2951332-2951406:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2944972-2945074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2936263-2936366:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2931577-2933714:-1:exon

si:dkey-33c12.4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: si:dkey-33c12.4
product: uncharacterized protein LOC560112 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_039009188.1
SIO_010081: si:dkey-33c12.4
subclass of: SO_0000673
so part of: si:dkey-33c12.4
location: complement(join(2931577..2933714,2936263..2936366,2944972..2945074,2951332..2951406,2959345..2959564,2960336..2960426,2962134..2962238,2965064..2965205,2970486..2970576,2970827..2970881,2971025..2971333,2985143..2985385,2988368..2988409,2991331..2991414,2991510..2991700,2993760..2993835,2996935..2996978,2997352..2997549))
location: region:2931577-2997549:-1
so has part: feature:2997352-2997549:-1:exon
so has part: feature:2996935-2996978:-1:exon
so has part: feature:2993760-2993835:-1:exon
so has part: feature:2991510-2991700:-1:exon
so has part: feature:2991331-2991414:-1:exon
so has part: feature:2988368-2988409:-1:exon
so has part: feature:2985143-2985385:-1:exon
so has part: feature:2971025-2971333:-1:exon
so has part: feature:2970827-2970881:-1:exon
so has part: feature:2970486-2970576:-1:exon
so has part: feature:2965064-2965205:-1:exon
so has part: feature:2962134-2962238:-1:exon
so has part: feature:2960336-2960426:-1:exon
so has part: feature:2959345-2959564:-1:exon
so has part: feature:2951332-2951406:-1:exon
so has part: feature:2944972-2945074:-1:exon
so has part: feature:2936263-2936366:-1:exon
so has part: feature:2931577-2933714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2997352-2997549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2996935-2996978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2993760-2993835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2991510-2991700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2991331-2991414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2988368-2988409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985143-2985385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2971025-2971333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2970827-2970881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2970486-2970576:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2965064-2965205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2962134-2962238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2960336-2960426:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2959345-2959564:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2951332-2951406:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2944972-2945074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2936263-2936366:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2931577-2933714:-1:exon

si:dkey-33c12.4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: si:dkey-33c12.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:dkey-33c12.4 isoform X3
translation: MSHFRKRDWKPDHVIMQENPHILRTHEAMVDLIHGRATKHTFMDAFNYGLLGLDIVNPFVGDYIDDEYDDDSDYYDDKKHKDKKAYCGFTHNFLGHSISKLPLTPHPCIRQLTPEEAEKNARELIEEEDKLKEKAEKKRLKKKRQKERKRAGKDKEAENRGPGRSSRSENQGGDLNIEREQQEEEKEFTEEGLGPGPGGTTACSRQQEAQDSPLEETCGSSNEDQEDVRDEGLAREPEKKVEANVDDILKRSTELALIGNQFAACGQLEMAVKYFTDAIKHNPTEFKLFGNRSFCYEKMQQYDRALCDANLALSMEPGWIKGLYRKGKALSGLKRYFEACQTYKEVLKQDSLCSDAAQELVQVQIMMLMEMGFTREQSSDALIAHGDFEKALNVLSGIEDEYGSNDFPAAATFTEDSATWEGVGPRPKPHLQTRPKPRSTTPGPKPRSTTPGPERRSPIPGPVHHVAPGGSTSNLFPVYVGCLAPNTTQPMLHSLFSSAGTIHSIKILRSSNCAFINYHNMDHCEKAIRTLHGEVLNGVMLAVRHPDKVMQKKLGLSQLAFTFTNAPEKSQECYFWRTTGCVRYNTCIYRHVPQHKGIDRDKVNK
SIO_010081: si:dkey-33c12.4
subclass of: SO_0000673
so part of: si:dkey-33c12.4
location: complement(join(2933597..2933714,2936263..2936366,2944972..2945074,2951332..2951406,2959345..2959564,2960336..2960426,2962134..2962238,2965064..2965205,2970486..2970576,2970827..2970881,2985143..2985385,2988368..2988409,2991331..2991414,2991510..2991700,2993760..2993835,2996935..2996978,2997352..2997385))
location: region:2933597-2997385:-1
so has part: feature:2997352-2997385:-1:exon
so has part: feature:2996935-2996978:-1:exon
so has part: feature:2993760-2993835:-1:exon
so has part: feature:2991510-2991700:-1:exon
so has part: feature:2991331-2991414:-1:exon
so has part: feature:2988368-2988409:-1:exon
so has part: feature:2985143-2985385:-1:exon
so has part: feature:2970827-2970881:-1:exon
so has part: feature:2970486-2970576:-1:exon
so has part: feature:2965064-2965205:-1:exon
so has part: feature:2962134-2962238:-1:exon
so has part: feature:2960336-2960426:-1:exon
so has part: feature:2959345-2959564:-1:exon
so has part: feature:2951332-2951406:-1:exon
so has part: feature:2944972-2945074:-1:exon
so has part: feature:2936263-2936366:-1:exon
so has part: feature:2933597-2933714:-1:exon

XP_038865119.1
type: Protein
SIO_000068: ncbiprotein

position:2933597:-1
position: 2933597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2997385:-1
position: 2997385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997352-2997385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2996935-2996978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2993760-2993835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2991510-2991700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2991331-2991414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2988368-2988409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985143-2985385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2970827-2970881:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2970486-2970576:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2965064-2965205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2962134-2962238:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2960336-2960426:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2959345-2959564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2951332-2951406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2944972-2945074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2936263-2936366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2933597-2933714:-1:exon

si:dkey-33c12.4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: si:dkey-33c12.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rootletin isoform X2
translation: MSHFRKRDWKPDHVIMQENPHILRTHEAMVDLIHGRATKHTFMDAFNYGLLGLDIVNPFVGDYIDDEYDDDSDYYDDKKHKDKKAYCGFTHNFLGHSISKLPLTPHPCIRQLTPEEAEKNARELIEEEDKLKEKAEKKRLKKKRQKERKRAGKDKEAENRGPGRSSRSENQGGDLNIEREQQEEEKEFTEEGLGPGPGGTTACSRQQEAQDSPLEETCGSSNEDQEDVRDEGLAREPEELDMSSCFISTAACIAKRQLEQNPKPEKKIIIQEPVVERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEVIVRKKEKKVEANVDDILKRSTELALIGNQFAACGQLEMAVKYFTDAIKHNPTEFKLFGNRSFCYEKMQQYDRALCDANLALSMEPGWIKGLYRKGKALSGLKRYFEACQTYKEVLKQDSLCSDAAQELVQVQIMMLMEMGFTREQSSDALIAHGDFEKALNVLSGIEEDSATWEGVGPRPKPHLQTRPKPRSTTPGPKPRSTTPGPERRSPIPGPVHHVAPGGSTSNLFPVYVGCLAPNTTQPMLHSLFSSAGTIHSIKILRSSNCAFINYHNMDHCEKAIRTLHGEVLNGVMLAVRHPDKVMQKKLGLSQLAFTFTNAPEKSQECYFWRTTGCVRYNTCIYRHVPQHKGIDRDKVNK
SIO_010081: si:dkey-33c12.4
subclass of: SO_0000673
so part of: si:dkey-33c12.4
location: complement(join(2933597..2933714,2936263..2936366,2944972..2945074,2951332..2951406,2959345..2959519,2960336..2960426,2962134..2962238,2965064..2965205,2970486..2970576,2970827..2970881,2971025..2971333,2985143..2985385,2988368..2988409,2991331..2991414,2991510..2991700,2993760..2993835,2996935..2996978,2997352..2997385))
location: region:2933597-2997385:-1
so has part: feature:2997352-2997385:-1:exon
so has part: feature:2996935-2996978:-1:exon
so has part: feature:2993760-2993835:-1:exon
so has part: feature:2991510-2991700:-1:exon
so has part: feature:2991331-2991414:-1:exon
so has part: feature:2988368-2988409:-1:exon
so has part: feature:2985143-2985385:-1:exon
so has part: feature:2971025-2971333:-1:exon
so has part: feature:2970827-2970881:-1:exon
so has part: feature:2970486-2970576:-1:exon
so has part: feature:2965064-2965205:-1:exon
so has part: feature:2962134-2962238:-1:exon
so has part: feature:2960336-2960426:-1:exon
so has part: feature:2959345-2959519:-1:exon
so has part: feature:2951332-2951406:-1:exon
so has part: feature:2944972-2945074:-1:exon
so has part: feature:2936263-2936366:-1:exon
so has part: feature:2933597-2933714:-1:exon

XP_038865117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2997352-2997385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2996935-2996978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2993760-2993835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2991510-2991700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2991331-2991414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2988368-2988409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985143-2985385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2971025-2971333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2970827-2970881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2970486-2970576:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2965064-2965205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2962134-2962238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2960336-2960426:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2959345-2959519:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2951332-2951406:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2944972-2945074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2936263-2936366:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2933597-2933714:-1:exon

si:dkey-33c12.4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: si:dkey-33c12.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rootletin isoform X1
translation: MSHFRKRDWKPDHVIMQENPHILRTHEAMVDLIHGRATKHTFMDAFNYGLLGLDIVNPFVGDYIDDEYDDDSDYYDDKKHKDKKAYCGFTHNFLGHSISKLPLTPHPCIRQLTPEEAEKNARELIEEEDKLKEKAEKKRLKKKRQKERKRAGKDKEAENRGPGRSSRSENQGGDLNIEREQQEEEKEFTEEGLGPGPGGTTACSRQQEAQDSPLEETCGSSNEDQEDVRDEGLAREPEELDMSSCFISTAACIAKRQLEQNPKPEKKIIIQEPVVERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEKERQQEVIVRKKEKKVEANVDDILKRSTELALIGNQFAACGQLEMAVKYFTDAIKHNPTEFKLFGNRSFCYEKMQQYDRALCDANLALSMEPGWIKGLYRKGKALSGLKRYFEACQTYKEVLKQDSLCSDAAQELVQVQIMMLMEMGFTREQSSDALIAHGDFEKALNVLSGIEDEYGSNDFPAAATFTEDSATWEGVGPRPKPHLQTRPKPRSTTPGPKPRSTTPGPERRSPIPGPVHHVAPGGSTSNLFPVYVGCLAPNTTQPMLHSLFSSAGTIHSIKILRSSNCAFINYHNMDHCEKAIRTLHGEVLNGVMLAVRHPDKVMQKKLGLSQLAFTFTNAPEKSQECYFWRTTGCVRYNTCIYRHVPQHKGIDRDKVNK
SIO_010081: si:dkey-33c12.4
subclass of: SO_0000673
so part of: si:dkey-33c12.4
location: complement(join(2933597..2933714,2936263..2936366,2944972..2945074,2951332..2951406,2959345..2959564,2960336..2960426,2962134..2962238,2965064..2965205,2970486..2970576,2970827..2970881,2971025..2971333,2985143..2985385,2988368..2988409,2991331..2991414,2991510..2991700,2993760..2993835,2996935..2996978,2997352..2997385))
location: region:2933597-2997385:-1
so has part: feature:2997352-2997385:-1:exon
so has part: feature:2996935-2996978:-1:exon
so has part: feature:2993760-2993835:-1:exon
so has part: feature:2991510-2991700:-1:exon
so has part: feature:2991331-2991414:-1:exon
so has part: feature:2988368-2988409:-1:exon
so has part: feature:2985143-2985385:-1:exon
so has part: feature:2971025-2971333:-1:exon
so has part: feature:2970827-2970881:-1:exon
so has part: feature:2970486-2970576:-1:exon
so has part: feature:2965064-2965205:-1:exon
so has part: feature:2962134-2962238:-1:exon
so has part: feature:2960336-2960426:-1:exon
so has part: feature:2959345-2959564:-1:exon
so has part: feature:2951332-2951406:-1:exon
so has part: feature:2944972-2945074:-1:exon
so has part: feature:2936263-2936366:-1:exon
so has part: feature:2933597-2933714:-1:exon

XP_038865116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2997352-2997385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2996935-2996978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2993760-2993835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2991510-2991700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2991331-2991414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2988368-2988409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985143-2985385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2971025-2971333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2970827-2970881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2970486-2970576:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2965064-2965205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2962134-2962238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2960336-2960426:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2959345-2959564:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2951332-2951406:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2944972-2945074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2936263-2936366:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2933597-2933714:-1:exon

LOC120060110
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3003073..3012843)
location: region:3003073-3012843:-1
so has part: feature:3003073-3012843:-1:exon
subclass of: SO_0000010

120060110
type: Gene
SIO_000068: ncbigene

position:3003073:-1
position: 3003073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012843:-1
position: 3012843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3003073-3012843:-1:exon

LOC120060110
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060110
product: probable N-acetyltransferase CML1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039009192.1
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(join(3003073..3003146,3003251..3003902,3011990..3012071))
location: region:3003073-3012071:-1
so has part: feature:3011990-3012071:-1:exon
so has part: feature:3003251-3003902:-1:exon
so has part: feature:3003073-3003146:-1:exon

position:3012071:-1
position: 3012071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3011990-3012071:-1:exon

position:3011990:-1
position: 3011990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3003251-3003902:-1:exon

position:3003251:-1
position: 3003251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003902:-1
position: 3003902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3003073-3003146:-1:exon

position:3003146:-1
position: 3003146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120060110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable N-acetyltransferase CML1 isoform X1
translation: MDLRYTVRRQTSAMAAGITIRRYQDDDKETVKEIFTMGMSEHVPSSFMHLLKQPLTQMILMVTFCALLASSKSVLLPVVGVTLLLAGAKQLVGYLFNSYIDTSLRKDLDHIQETYLENKDSCFWVAESDDRVVATVACLPAEREPGCMELKRLSVRRTHRGMGIAKALCRTVADFSRERGFPAVVLYTSVVQTDAQRLYENLGYTRVREFVIPEPIAKIANFTLIEYRLDLLQGGK
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(join(3003118..3003146,3003251..3003902,3011990..3012019))
location: region:3003118-3012019:-1
so has part: feature:3011990-3012019:-1:exon
so has part: feature:3003251-3003902:-1:exon
so has part: feature:3003118-3003146:-1:exon

XP_038865120.1
type: Protein
SIO_000068: ncbiprotein

position:3003118:-1
position: 3003118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012019:-1
position: 3012019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3011990-3012019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3003251-3003902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3003118-3003146:-1:exon

LOC120060110
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060110
product: probable N-acetyltransferase CML1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_039009194.1
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(join(3003153..3003902,3012751..3012843))
location: region:3003153-3012843:-1
so has part: feature:3012751-3012843:-1:exon
so has part: feature:3003153-3003902:-1:exon

position:3003153:-1
position: 3003153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012751-3012843:-1:exon

position:3012751:-1
position: 3012751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3003153-3003902:-1:exon

LOC120060110
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060110
product: probable N-acetyltransferase CML1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039009195.1
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(join(3003153..3003902,3012377..3012400))
location: region:3003153-3012400:-1
so has part: feature:3012377-3012400:-1:exon
so has part: feature:3003153-3003902:-1:exon

position:3012400:-1
position: 3012400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012377-3012400:-1:exon

position:3012377:-1
position: 3012377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3003153-3003902:-1:exon

LOC120060110
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060110
product: probable N-acetyltransferase CML1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_039009193.1
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(join(3003153..3003902,3012002..3012063))
location: region:3003153-3012063:-1
so has part: feature:3012002-3012063:-1:exon
so has part: feature:3003153-3003902:-1:exon

position:3012063:-1
position: 3012063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012002-3012063:-1:exon

position:3012002:-1
position: 3012002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3003153-3003902:-1:exon

LOC120060110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable N-acetyltransferase CML1 isoform X2
translation: MDLRYTTSAMAAGITIRRYQDDDKETVKEIFTMGMSEHVPSSFMHLLKQPLTQMILMVTFCALLASSKSVLLPVVGVTLLLAGAKQLVGYLFNSYIDTSLRKDLDHIQETYLENKDSCFWVAESDDRVVATVACLPAEREPGCMELKRLSVRRTHRGMGIAKALCRTVADFSRERGFPAVVLYTSVVQTDAQRLYENLGYTRVREFVIPEPIAKIANFTLIEYRLDLLQGGK
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(join(3003222..3003902,3012002..3012019))
location: region:3003222-3012019:-1
so has part: feature:3012002-3012019:-1:exon
so has part: feature:3003222-3003902:-1:exon

XP_038865121.1
type: Protein
SIO_000068: ncbiprotein

position:3003222:-1
position: 3003222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012002-3012019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3003222-3003902:-1:exon

LOC120060110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable N-acetyltransferase CML1 isoform X3
translation: MAAGITIRRYQDDDKETVKEIFTMGMSEHVPSSFMHLLKQPLTQMILMVTFCALLASSKSVLLPVVGVTLLLAGAKQLVGYLFNSYIDTSLRKDLDHIQETYLENKDSCFWVAESDDRVVATVACLPAEREPGCMELKRLSVRRTHRGMGIAKALCRTVADFSRERGFPAVVLYTSVVQTDAQRLYENLGYTRVREFVIPEPIAKIANFTLIEYRLDLLQGGK
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(3003222..3003893)
location: region:3003222-3003893:-1
so has part: feature:3003222-3003893:-1:exon

XP_038865122.1
type: Protein
SIO_000068: ncbiprotein

position:3003893:-1
position: 3003893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3003222-3003893:-1:exon

LOC120060110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable N-acetyltransferase CML1 isoform X3
translation: MAAGITIRRYQDDDKETVKEIFTMGMSEHVPSSFMHLLKQPLTQMILMVTFCALLASSKSVLLPVVGVTLLLAGAKQLVGYLFNSYIDTSLRKDLDHIQETYLENKDSCFWVAESDDRVVATVACLPAEREPGCMELKRLSVRRTHRGMGIAKALCRTVADFSRERGFPAVVLYTSVVQTDAQRLYENLGYTRVREFVIPEPIAKIANFTLIEYRLDLLQGGK
SIO_010081: LOC120060110
subclass of: SO_0000673
so part of: LOC120060110
location: complement(3003222..3003893)
location: region:3003222-3003893:-1
so has part: feature:3003222-3003893:-1:exon

XP_038865123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3003222-3003893:-1:exon

manba
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: manba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3037692..3073164)
location: region:3037692-3073164:-1
so has part: feature:3037692-3073164:-1:exon
subclass of: SO_0000010

120059800
type: Gene
SIO_000068: ncbigene

position:3037692:-1
position: 3037692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3073164:-1
position: 3073164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3037692-3073164:-1:exon

manba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: manba
product: mannosidase, beta A, lysosomal
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039008849.1
SIO_010081: manba
subclass of: SO_0000673
so part of: manba
location: complement(join(3037692..3038171,3038605..3038868,3042901..3043043,3052112..3052256,3062413..3062577,3062664..3062882,3071244..3071411,3072344..3072430,3072525..3073164))
location: region:3037692-3073164:-1
so has part: feature:3072525-3073164:-1:exon
so has part: feature:3072344-3072430:-1:exon
so has part: feature:3071244-3071411:-1:exon
so has part: feature:3062664-3062882:-1:exon
so has part: feature:3062413-3062577:-1:exon
so has part: feature:3052112-3052256:-1:exon
so has part: feature:3042901-3043043:-1:exon
so has part: feature:3038605-3038868:-1:exon
so has part: feature:3037692-3038171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3072525-3073164:-1:exon

position:3072525:-1
position: 3072525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3072344-3072430:-1:exon

position:3072344:-1
position: 3072344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3072430:-1
position: 3072430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3071244-3071411:-1:exon

position:3071244:-1
position: 3071244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3071411:-1
position: 3071411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3062664-3062882:-1:exon

position:3062664:-1
position: 3062664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3062882:-1
position: 3062882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3062413-3062577:-1:exon

position:3062413:-1
position: 3062413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3062577:-1
position: 3062577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3052112-3052256:-1:exon

position:3052112:-1
position: 3052112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052256:-1
position: 3052256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3042901-3043043:-1:exon

position:3042901:-1
position: 3042901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3043043:-1
position: 3043043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3038605-3038868:-1:exon

position:3038605:-1
position: 3038605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038868:-1
position: 3038868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3037692-3038171:-1:exon

position:3038171:-1
position: 3038171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

manba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: manba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-mannosidase
translation: MNALRVWGGGVYEQDLFYSLCDEMGIMIWQDFMFACAMYPTEPDFIETVREEVVQQVRRLKSHPSVIVWSGNNENEAALATDWFGIPVAQQPRYHRDYVTLYVDNIRAIVQKEDGSRPFLVSSPTNGAESQQEGWVAHDPYDVHYGDTHYYSYSHDCWDWTALPRTRFASEYGFQSWPSFSTLQKVSVSEDWSYGSNFSSHRQHHQSGNQQMLQQAGLHYQLPASADPLKRYRDTLYITQVMQAQCVKVQTEFYRRSQSEVIEGKGHTMGALYWQLNDIWQGPSWSSIEFGGKWKMLHYFAKDFFSPVLPVGFEDQGSLVVYAVSDLSHDLKLRTVVSVYEWSSLDPVCTVTSGFVLVEGGSAEVVHKQPITALLAGCGRGSCTRLTCLLTFHLEDVNSQQGPINHLFLSSPKNAQGMLRPNTTAEVQQDEMGGYTVTLQSSAVAAFVWLDVGDVPGRFSTNGFLMVTKNRTVTFNPWGPTSTQQLAQALTVTSLRDVY
SIO_010081: manba
subclass of: SO_0000673
so part of: manba
location: complement(join(3037944..3038171,3038605..3038868,3042901..3043043,3052112..3052256,3062413..3062577,3062664..3062882,3071244..3071411,3072344..3072430,3072525..3072605))
location: region:3037944-3072605:-1
so has part: feature:3072525-3072605:-1:exon
so has part: feature:3072344-3072430:-1:exon
so has part: feature:3071244-3071411:-1:exon
so has part: feature:3062664-3062882:-1:exon
so has part: feature:3062413-3062577:-1:exon
so has part: feature:3052112-3052256:-1:exon
so has part: feature:3042901-3043043:-1:exon
so has part: feature:3038605-3038868:-1:exon
so has part: feature:3037944-3038171:-1:exon

XP_038864777.1
type: Protein
SIO_000068: ncbiprotein

position:3037944:-1
position: 3037944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3072605:-1
position: 3072605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3072525-3072605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3072344-3072430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071244-3071411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3062664-3062882:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3062413-3062577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3052112-3052256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3042901-3043043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3038605-3038868:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3037944-3038171:-1:exon

actn1
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: actn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3091144..3172750
location: region:3091144-3172750:1
so has part: feature:3091144-3172750:1:exon
subclass of: SO_0000010

120059730
type: Gene
SIO_000068: ncbigene

position:3091144:1
position: 3091144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3172750:1
position: 3172750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3091144-3172750:1:exon

actn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: actn1
product: actinin, alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008785.1
SIO_010081: actn1
subclass of: SO_0000673
so part of: actn1
location: join(3091144..3091153,3092740..3092859,3113200..3113286,3113941..3114028,3126017..3126095,3127796..3127877,3132455..3132540,3143820..3143912,3144734..3144859,3145590..3145694,3153017..3153164,3154392..3154542,3157495..3157603,3157927..3158067,3158200..3158382,3158623..3158757,3160083..3160262,3160386..3160532,3165628..3165708,3167446..3167604,3170499..3172750)
location: region:3091144-3172750:1
so has part: feature:3091144-3091153:1:exon
so has part: feature:3092740-3092859:1:exon
so has part: feature:3113200-3113286:1:exon
so has part: feature:3113941-3114028:1:exon
so has part: feature:3126017-3126095:1:exon
so has part: feature:3127796-3127877:1:exon
so has part: feature:3132455-3132540:1:exon
so has part: feature:3143820-3143912:1:exon
so has part: feature:3144734-3144859:1:exon
so has part: feature:3145590-3145694:1:exon
so has part: feature:3153017-3153164:1:exon
so has part: feature:3154392-3154542:1:exon
so has part: feature:3157495-3157603:1:exon
so has part: feature:3157927-3158067:1:exon
so has part: feature:3158200-3158382:1:exon
so has part: feature:3158623-3158757:1:exon
so has part: feature:3160083-3160262:1:exon
so has part: feature:3160386-3160532:1:exon
so has part: feature:3165628-3165708:1:exon
so has part: feature:3167446-3167604:1:exon
so has part: feature:3170499-3172750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3091144-3091153:1:exon

position:3091153:1
position: 3091153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3092740-3092859:1:exon

position:3092740:1
position: 3092740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092859:1
position: 3092859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3113200-3113286:1:exon

position:3113200:1
position: 3113200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3113286:1
position: 3113286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3113941-3114028:1:exon

position:3113941:1
position: 3113941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3114028:1
position: 3114028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3126017-3126095:1:exon

position:3126017:1
position: 3126017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3126095:1
position: 3126095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3127796-3127877:1:exon

position:3127796:1
position: 3127796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3127877:1
position: 3127877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3132455-3132540:1:exon

position:3132455:1
position: 3132455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3132540:1
position: 3132540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3143820-3143912:1:exon

position:3143820:1
position: 3143820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143912:1
position: 3143912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3144734-3144859:1:exon

position:3144734:1
position: 3144734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144859:1
position: 3144859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3145590-3145694:1:exon

position:3145590:1
position: 3145590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145694:1
position: 3145694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3153017-3153164:1:exon

position:3153017:1
position: 3153017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153164:1
position: 3153164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3154392-3154542:1:exon

position:3154392:1
position: 3154392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154542:1
position: 3154542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3157495-3157603:1:exon

position:3157495:1
position: 3157495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157603:1
position: 3157603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3157927-3158067:1:exon

position:3157927:1
position: 3157927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3158067:1
position: 3158067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3158200-3158382:1:exon

position:3158200:1
position: 3158200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3158382:1
position: 3158382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3158623-3158757:1:exon

position:3158623:1
position: 3158623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3158757:1
position: 3158757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3160083-3160262:1:exon

position:3160083:1
position: 3160083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160262:1
position: 3160262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3160386-3160532:1:exon

position:3160386:1
position: 3160386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160532:1
position: 3160532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3165628-3165708:1:exon

position:3165628:1
position: 3165628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3165708:1
position: 3165708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3167446-3167604:1:exon

position:3167446:1
position: 3167446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3167604:1
position: 3167604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3170499-3172750:1:exon

position:3170499:1
position: 3170499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

actn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: actn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-actinin-1
translation: MPGGERLAKPERGKMRVHKISNVNKALHYITSKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRQHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDVSNAWGGLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEEMLQARDFETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQNICDQWDALGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQSLSTAHEQFKATLPDADKERGAILGIHNEIAKIVATYHVNMAGSNPYTNINPQEVNAKWDKVRQLVPQRDQALIEEHARQQNSERLRRQFANQANVIGPWIQTKMAEIGRISIEMHGTLEDQLTHLRQYEKNIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEIENQILTRDAKGISQDQMNEFRASFNHFDRDHSGTLGAEEFKACLISLGFDIANDAQGEAEFSRIMSIVDPNRVGVVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKNFIMADELRRELPPDQAEYCIARMAPYSGTDAVPGALDYMSFSTALYGESDL
SIO_010081: actn1
subclass of: SO_0000673
so part of: actn1
location: join(3091144..3091153,3092740..3092859,3113200..3113286,3113941..3114028,3126017..3126095,3127796..3127877,3132455..3132540,3143820..3143912,3144734..3144859,3145590..3145694,3153017..3153164,3154392..3154542,3157495..3157603,3157927..3158067,3158200..3158382,3158623..3158757,3160083..3160262,3160386..3160532,3165628..3165708,3167446..3167604,3170499..3170657)
location: region:3091144-3170657:1
so has part: feature:3091144-3091153:1:exon
so has part: feature:3092740-3092859:1:exon
so has part: feature:3113200-3113286:1:exon
so has part: feature:3113941-3114028:1:exon
so has part: feature:3126017-3126095:1:exon
so has part: feature:3127796-3127877:1:exon
so has part: feature:3132455-3132540:1:exon
so has part: feature:3143820-3143912:1:exon
so has part: feature:3144734-3144859:1:exon
so has part: feature:3145590-3145694:1:exon
so has part: feature:3153017-3153164:1:exon
so has part: feature:3154392-3154542:1:exon
so has part: feature:3157495-3157603:1:exon
so has part: feature:3157927-3158067:1:exon
so has part: feature:3158200-3158382:1:exon
so has part: feature:3158623-3158757:1:exon
so has part: feature:3160083-3160262:1:exon
so has part: feature:3160386-3160532:1:exon
so has part: feature:3165628-3165708:1:exon
so has part: feature:3167446-3167604:1:exon
so has part: feature:3170499-3170657:1:exon

XP_038864713.1
type: Protein
SIO_000068: ncbiprotein

position:3170657:1
position: 3170657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3091144-3091153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3092740-3092859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3113200-3113286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113941-3114028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3126017-3126095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3127796-3127877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3132455-3132540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3143820-3143912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3144734-3144859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3145590-3145694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3153017-3153164:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3154392-3154542:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3157495-3157603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3157927-3158067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3158200-3158382:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3158623-3158757:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3160083-3160262:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3160386-3160532:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3165628-3165708:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3167446-3167604:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3170499-3170657:1:exon

dcaf5
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: dcaf5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3209618..3232205)
location: region:3209618-3232205:-1
so has part: feature:3209618-3232205:-1:exon
subclass of: SO_0000010

120060111
type: Gene
SIO_000068: ncbigene

position:3209618:-1
position: 3209618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232205:-1
position: 3232205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3209618-3232205:-1:exon

dcaf5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: dcaf5
product: ddb1 and cul4 associated factor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039009196.1
SIO_010081: dcaf5
subclass of: SO_0000673
so part of: dcaf5
location: complement(join(3209618..3212100,3212570..3212716,3219210..3219337,3219425..3219491,3223330..3223543,3226261..3226390,3228468..3228607,3229465..3229501,3230851..3230997,3231771..3232205))
location: region:3209618-3232205:-1
so has part: feature:3231771-3232205:-1:exon
so has part: feature:3230851-3230997:-1:exon
so has part: feature:3229465-3229501:-1:exon
so has part: feature:3228468-3228607:-1:exon
so has part: feature:3226261-3226390:-1:exon
so has part: feature:3223330-3223543:-1:exon
so has part: feature:3219425-3219491:-1:exon
so has part: feature:3219210-3219337:-1:exon
so has part: feature:3212570-3212716:-1:exon
so has part: feature:3209618-3212100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3231771-3232205:-1:exon

position:3231771:-1
position: 3231771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3230851-3230997:-1:exon

position:3230851:-1
position: 3230851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230997:-1
position: 3230997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3229465-3229501:-1:exon

position:3229465:-1
position: 3229465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3229501:-1
position: 3229501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3228468-3228607:-1:exon

position:3228468:-1
position: 3228468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3228607:-1
position: 3228607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3226261-3226390:-1:exon

position:3226261:-1
position: 3226261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3226390:-1
position: 3226390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3223330-3223543:-1:exon

position:3223330:-1
position: 3223330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3223543:-1
position: 3223543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3219425-3219491:-1:exon

position:3219425:-1
position: 3219425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219491:-1
position: 3219491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3219210-3219337:-1:exon

position:3219210:-1
position: 3219210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219337:-1
position: 3219337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3212570-3212716:-1:exon

position:3212570:-1
position: 3212570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212716:-1
position: 3212716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3209618-3212100:-1:exon

position:3212100:-1
position: 3212100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dcaf5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: dcaf5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 5
translation: MREVKGCGMRSSVGFLSQRRLFGNPLMKEEFQRLRLAGCTSLYKKDMLGHFGCVNAIEFSNNGGEYLVSGGDDRRVLLWNMERALHARSAKPLKLKGEHLSNIFCLAFDSTNKRVFSGGNDEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEPFCLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRYGGSMSLQSAMSVRFNSAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDEDQYILSGSDDFNLYMWRIPKDPEAGGPGRVVNGASMVLKGHRSIVNQVRFNPSTYMICSSGVEKVIKAWSPYQQPECLGDLDGFVEDKSRSLYSHEEYINLVLNSGSGLSHDYVSQSIQEDPRMMAFFDSLVRREIEGWSSDSDSDLSEGAILQLHARGRRSTRAIRDGAGVLVGSGVATPLPPAAAATADSDHSSSSSLAAPEASGAEHPEGVEPPQPRRRGSRYQQSVFLLDLVGEDSDSSGFWPDPMPRPRSPSPRDNSTLSSPTSSPAGASSSSSSSTSSTSSEDEEQRRASRRQRTAARWRRMHFPRLSSGGRPESAQALYPGGVDSCSYPKISIDEASSSSASSTELQQDQDSVQIGPHRSGSKTGRRKSHTRPGSSPAVSLDSQDDRAEQEGLLIASLLSQDALQQRNESRAGRGGERRAALERMAEGLDSPEEADESDHSRWISPSSRHHSPGLNGLQHLDMTEVPVGCRGRLAPDLFESSDSEGERDTLELKSAGTRTLVEEGEEGGSSSQRGPAQGALKRTHLGSRGQGSGEGSGGSETSEKKFKT
SIO_010081: dcaf5
subclass of: SO_0000673
so part of: dcaf5
location: complement(join(3210778..3212100,3212570..3212716,3219210..3219337,3219425..3219491,3223330..3223543,3226261..3226390,3228468..3228607,3229465..3229501,3230851..3230997,3231771..3231978))
location: region:3210778-3231978:-1
so has part: feature:3231771-3231978:-1:exon
so has part: feature:3230851-3230997:-1:exon
so has part: feature:3229465-3229501:-1:exon
so has part: feature:3228468-3228607:-1:exon
so has part: feature:3226261-3226390:-1:exon
so has part: feature:3223330-3223543:-1:exon
so has part: feature:3219425-3219491:-1:exon
so has part: feature:3219210-3219337:-1:exon
so has part: feature:3212570-3212716:-1:exon
so has part: feature:3210778-3212100:-1:exon

XP_038865124.1
type: Protein
SIO_000068: ncbiprotein

position:3210778:-1
position: 3210778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231978:-1
position: 3231978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3231771-3231978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3230851-3230997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3229465-3229501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3228468-3228607:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3226261-3226390:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3223330-3223543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3219425-3219491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3219210-3219337:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3212570-3212716:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3210778-3212100:-1:exon

pacs2
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: pacs2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3235450..3355027)
location: region:3235450-3355027:-1
so has part: feature:3235450-3355027:-1:exon
subclass of: SO_0000010

120060112
type: Gene
SIO_000068: ncbigene

position:3235450:-1
position: 3235450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3355027:-1
position: 3355027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3235450-3355027:-1:exon

pacs2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: pacs2
product: phosphofurin acidic cluster sorting protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039009197.1
SIO_010081: pacs2
subclass of: SO_0000673
so part of: pacs2
location: complement(join(3235450..3235799,3236167..3236280,3237786..3238006,3238224..3238356,3238502..3238544,3239177..3239219,3242261..3242293,3244500..3244608,3245506..3245616,3246084..3246238,3246491..3246597,3252619..3252723,3254303..3254435,3258642..3258772,3259691..3259762,3266080..3266170,3266364..3266515,3271404..3271463,3272156..3272236,3274318..3274391,3276311..3276473,3282111..3282236,3284773..3284862,3288647..3288734,3354841..3355027))
location: region:3235450-3355027:-1
so has part: feature:3354841-3355027:-1:exon
so has part: feature:3288647-3288734:-1:exon
so has part: feature:3284773-3284862:-1:exon
so has part: feature:3282111-3282236:-1:exon
so has part: feature:3276311-3276473:-1:exon
so has part: feature:3274318-3274391:-1:exon
so has part: feature:3272156-3272236:-1:exon
so has part: feature:3271404-3271463:-1:exon
so has part: feature:3266364-3266515:-1:exon
so has part: feature:3266080-3266170:-1:exon
so has part: feature:3259691-3259762:-1:exon
so has part: feature:3258642-3258772:-1:exon
so has part: feature:3254303-3254435:-1:exon
so has part: feature:3252619-3252723:-1:exon
so has part: feature:3246491-3246597:-1:exon
so has part: feature:3246084-3246238:-1:exon
so has part: feature:3245506-3245616:-1:exon
so has part: feature:3244500-3244608:-1:exon
so has part: feature:3242261-3242293:-1:exon
so has part: feature:3239177-3239219:-1:exon
so has part: feature:3238502-3238544:-1:exon
so has part: feature:3238224-3238356:-1:exon
so has part: feature:3237786-3238006:-1:exon
so has part: feature:3236167-3236280:-1:exon
so has part: feature:3235450-3235799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3354841-3355027:-1:exon

position:3354841:-1
position: 3354841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3288647-3288734:-1:exon

position:3288647:-1
position: 3288647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3288734:-1
position: 3288734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3284773-3284862:-1:exon

position:3284773:-1
position: 3284773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3284862:-1
position: 3284862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3282111-3282236:-1:exon

position:3282111:-1
position: 3282111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3282236:-1
position: 3282236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3276311-3276473:-1:exon

position:3276311:-1
position: 3276311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276473:-1
position: 3276473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3274318-3274391:-1:exon

position:3274318:-1
position: 3274318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274391:-1
position: 3274391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3272156-3272236:-1:exon

position:3272156:-1
position: 3272156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272236:-1
position: 3272236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3271404-3271463:-1:exon

position:3271404:-1
position: 3271404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271463:-1
position: 3271463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3266364-3266515:-1:exon

position:3266364:-1
position: 3266364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3266515:-1
position: 3266515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3266080-3266170:-1:exon

position:3266080:-1
position: 3266080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3266170:-1
position: 3266170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3259691-3259762:-1:exon

position:3259691:-1
position: 3259691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3259762:-1
position: 3259762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3258642-3258772:-1:exon

position:3258642:-1
position: 3258642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258772:-1
position: 3258772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3254303-3254435:-1:exon

position:3254303:-1
position: 3254303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254435:-1
position: 3254435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3252619-3252723:-1:exon

position:3252619:-1
position: 3252619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3252723:-1
position: 3252723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3246491-3246597:-1:exon

position:3246491:-1
position: 3246491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246597:-1
position: 3246597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3246084-3246238:-1:exon

position:3246084:-1
position: 3246084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246238:-1
position: 3246238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3245506-3245616:-1:exon

position:3245506:-1
position: 3245506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245616:-1
position: 3245616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3244500-3244608:-1:exon

position:3244500:-1
position: 3244500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244608:-1
position: 3244608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3242261-3242293:-1:exon

position:3242261:-1
position: 3242261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3242293:-1
position: 3242293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3239177-3239219:-1:exon

position:3239177:-1
position: 3239177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3239219:-1
position: 3239219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3238502-3238544:-1:exon

position:3238502:-1
position: 3238502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238544:-1
position: 3238544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3238224-3238356:-1:exon

position:3238224:-1
position: 3238224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238356:-1
position: 3238356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3237786-3238006:-1:exon

position:3237786:-1
position: 3237786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238006:-1
position: 3238006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3236167-3236280:-1:exon

position:3236167:-1
position: 3236167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3236280:-1
position: 3236280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3235450-3235799:-1:exon

position:3235799:-1
position: 3235799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pacs2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: pacs2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphofurin acidic cluster sorting protein 2
translation: MAERSGRLSFGGGALNRPVPMNLFATWEIDGSSPSCIPRLCSLTLKRLVVLRELDKELISVVIAVKIQGSKRILRSHEIVLPPSGSVETDLALTFSLQYPHFLKREGNKLQILLQRRKRYKNRTILGYKTLAVGTIDMAEVMQHPTEGGQVLSLCSNQKEMLGKVAEIWIFSLSSQPIDHEEAALQEGTKIKCSDTYSEEEYESFSSEQEASDDAVQGQDLEDDEYDVRKPKKHRRSIVRTASITRQQNFKQRLVALIKRFRVSDEVLDSEQDPAEPPPEVEEDLDLESLEFENPSDSGPELDDDDSVLSTPKPKLKPYFEGLSLSSSQTDIGSIHSSRSHREPPSPMDPDKTTNRGDKFQVDNVSDNASLQEEQQEAVTPTTELEMDNMDTFLEKLPPTGKMKKTESLIIPSNRQEAKLAGRRGRSTSLKERQPNRPQNERANSLDNERLLDTRCHLQIPRKTVYDQLNHILVSDHHLPDSIILINTSDWQGQYLSGVLQSHHLPVVCTCTTADIQAAFNTIVSRIQRFCNCNSQTPIPIKIAVAGAQHYLGAVLRLFVDHLSYKTPDWLGYMRFLIIPLGSHPVSKYLGTIDYQYNSLFQDTAWTDLFHKPEAPVMVQESPDVVSRVTQYMVGANGAHQLPIAEAMLTYKQKRKKSFHFDFAVSPDEDSCQKFIPFIGMVKVGIVDQSSATSGDSDDASPMGMVFHSSTPQVSPALKEASPTPPSSPSVNTSFSSYSSPQGELMGLQVDYWVAPSPADRKRDVEKRDSSSSKNTLKCTFRSLQVSRLPQPGAQPQPAMSMTVVMKEKNKKVMFLPKKTKDKDVESKSQVIDGISRLICTAKHQQTMLRVLIDGVEWNDVKFFQLAAQWSSHVKHFPIGIFGHTKGPY
SIO_010081: pacs2
subclass of: SO_0000673
so part of: pacs2
location: complement(join(3235681..3235799,3236167..3236280,3237786..3238006,3238224..3238356,3238502..3238544,3239177..3239219,3242261..3242293,3244500..3244608,3245506..3245616,3246084..3246238,3246491..3246597,3252619..3252723,3254303..3254435,3258642..3258772,3259691..3259762,3266080..3266170,3266364..3266515,3271404..3271463,3272156..3272236,3274318..3274391,3276311..3276473,3282111..3282236,3284773..3284862,3288647..3288734,3354841..3354956))
location: region:3235681-3354956:-1
so has part: feature:3354841-3354956:-1:exon
so has part: feature:3288647-3288734:-1:exon
so has part: feature:3284773-3284862:-1:exon
so has part: feature:3282111-3282236:-1:exon
so has part: feature:3276311-3276473:-1:exon
so has part: feature:3274318-3274391:-1:exon
so has part: feature:3272156-3272236:-1:exon
so has part: feature:3271404-3271463:-1:exon
so has part: feature:3266364-3266515:-1:exon
so has part: feature:3266080-3266170:-1:exon
so has part: feature:3259691-3259762:-1:exon
so has part: feature:3258642-3258772:-1:exon
so has part: feature:3254303-3254435:-1:exon
so has part: feature:3252619-3252723:-1:exon
so has part: feature:3246491-3246597:-1:exon
so has part: feature:3246084-3246238:-1:exon
so has part: feature:3245506-3245616:-1:exon
so has part: feature:3244500-3244608:-1:exon
so has part: feature:3242261-3242293:-1:exon
so has part: feature:3239177-3239219:-1:exon
so has part: feature:3238502-3238544:-1:exon
so has part: feature:3238224-3238356:-1:exon
so has part: feature:3237786-3238006:-1:exon
so has part: feature:3236167-3236280:-1:exon
so has part: feature:3235681-3235799:-1:exon

XP_038865125.1
type: Protein
SIO_000068: ncbiprotein

position:3235681:-1
position: 3235681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3354956:-1
position: 3354956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3354841-3354956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3288647-3288734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3284773-3284862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3282111-3282236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3276311-3276473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3274318-3274391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3272156-3272236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271404-3271463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3266364-3266515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3266080-3266170:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3259691-3259762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3258642-3258772:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3254303-3254435:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3252619-3252723:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3246491-3246597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3246084-3246238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3245506-3245616:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3244500-3244608:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3242261-3242293:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3239177-3239219:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3238502-3238544:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3238224-3238356:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3237786-3238006:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3236167-3236280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3235681-3235799:-1:exon

srsf5a
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: srsf5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3366326..3371694)
location: region:3366326-3371694:-1
so has part: feature:3366326-3371694:-1:exon
subclass of: SO_0000010

120060113
type: Gene
SIO_000068: ncbigene

position:3366326:-1
position: 3366326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371694:-1
position: 3371694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3366326-3371694:-1:exon

srsf5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: srsf5a
product: serine and arginine rich splicing factor 5a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_039009199.1
SIO_010081: srsf5a
subclass of: SO_0000673
so part of: srsf5a
location: complement(join(3366326..3367332,3367626..3367733,3368005..3368078,3369627..3369699,3370050..3370196,3370446..3370516,3370965..3371099,3371609..3371694))
location: region:3366326-3371694:-1
so has part: feature:3371609-3371694:-1:exon
so has part: feature:3370965-3371099:-1:exon
so has part: feature:3370446-3370516:-1:exon
so has part: feature:3370050-3370196:-1:exon
so has part: feature:3369627-3369699:-1:exon
so has part: feature:3368005-3368078:-1:exon
so has part: feature:3367626-3367733:-1:exon
so has part: feature:3366326-3367332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3371609-3371694:-1:exon

position:3371609:-1
position: 3371609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3370965-3371099:-1:exon

position:3370965:-1
position: 3370965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371099:-1
position: 3371099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3370446-3370516:-1:exon

position:3370446:-1
position: 3370446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370516:-1
position: 3370516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3370050-3370196:-1:exon

position:3370050:-1
position: 3370050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370196:-1
position: 3370196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3369627-3369699:-1:exon

position:3369627:-1
position: 3369627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3369699:-1
position: 3369699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3368005-3368078:-1:exon

position:3368005:-1
position: 3368005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368078:-1
position: 3368078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3367626-3367733:-1:exon

position:3367626:-1
position: 3367626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3367733:-1
position: 3367733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3366326-3367332:-1:exon

position:3367332:-1
position: 3367332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

srsf5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: srsf5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine and arginine rich splicing factor 5a
translation: MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHARSRRGRGGGPGMGGGGGGGGSGRFSPRFSSYRQGSGGHSGGSSRYGPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNAIDKLDGTDLNGRKLKLSEDRKSRHSRSRSRGSRSYSRSRSRSPRSKSRSRSHNRSRSPRSRSASRTPEKKPSSGVGGRAAHRSQSRSRSPAPRSRTPPPRSRSRTPPPVSPVPARKQSPSRSRSPSVESQH
SIO_010081: srsf5a
subclass of: SO_0000673
so part of: srsf5a
location: complement(join(3367005..3367332,3367626..3367733,3368005..3368078,3369627..3369699,3370050..3370196,3370446..3370516,3370965..3371090))
location: region:3367005-3371090:-1
so has part: feature:3370965-3371090:-1:exon
so has part: feature:3370446-3370516:-1:exon
so has part: feature:3370050-3370196:-1:exon
so has part: feature:3369627-3369699:-1:exon
so has part: feature:3368005-3368078:-1:exon
so has part: feature:3367626-3367733:-1:exon
so has part: feature:3367005-3367332:-1:exon

XP_038865127.1
type: Protein
SIO_000068: ncbiprotein

position:3367005:-1
position: 3367005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371090:-1
position: 3371090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3370965-3371090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3370446-3370516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3370050-3370196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3369627-3369699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368005-3368078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3367626-3367733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3367005-3367332:-1:exon

LOC120059801
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3372497..3396860)
location: region:3372497-3396860:-1
so has part: feature:3372497-3396860:-1:exon
subclass of: SO_0000010

120059801
type: Gene
SIO_000068: ncbigene

position:3372497:-1
position: 3372497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396860:-1
position: 3396860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3372497-3396860:-1:exon

LOC120059801
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059801
product: deubiquitinase DESI2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039008850.1
SIO_010081: LOC120059801
subclass of: SO_0000673
so part of: LOC120059801
location: complement(join(3372497..3374973,3375198..3375339,3384729..3384822,3387919..3387991,3396235..3396860))
location: region:3372497-3396860:-1
so has part: feature:3396235-3396860:-1:exon
so has part: feature:3387919-3387991:-1:exon
so has part: feature:3384729-3384822:-1:exon
so has part: feature:3375198-3375339:-1:exon
so has part: feature:3372497-3374973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3396235-3396860:-1:exon

position:3396235:-1
position: 3396235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3387919-3387991:-1:exon

position:3387919:-1
position: 3387919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3387991:-1
position: 3387991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3384729-3384822:-1:exon

position:3384729:-1
position: 3384729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3384822:-1
position: 3384822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3375198-3375339:-1:exon

position:3375198:-1
position: 3375198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3375339:-1
position: 3375339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3372497-3374973:-1:exon

position:3374973:-1
position: 3374973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059801
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deubiquitinase DESI2
translation: MANEPVILNVYDMYWINEYTSTLGVGVYHSGIEIYGREFAYGGHPYPFSGIFEINPGNTTELGETFKFKEAIALGTTDFAEEDMDKIMEDLGTDFKGNSYHLMHKNCNHFSSSLSELLCGREIPRWVNRLAYFSSCVPFLQTCLPKEWLTPAALQSHISMGLHKEEREAGESSDDDPNSASGTAGAGTGSSHSCRHTRV
SIO_010081: LOC120059801
subclass of: SO_0000673
so part of: LOC120059801
location: complement(join(3374722..3374973,3375198..3375339,3384729..3384822,3387919..3387991,3396235..3396273))
location: region:3374722-3396273:-1
so has part: feature:3396235-3396273:-1:exon
so has part: feature:3387919-3387991:-1:exon
so has part: feature:3384729-3384822:-1:exon
so has part: feature:3375198-3375339:-1:exon
so has part: feature:3374722-3374973:-1:exon

XP_038864778.1
type: Protein
SIO_000068: ncbiprotein

position:3374722:-1
position: 3374722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396273:-1
position: 3396273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3396235-3396273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3387919-3387991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3384729-3384822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3375198-3375339:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3374722-3374973:-1:exon

LOC120059802
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120059802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3402621..3411292)
location: region:3402621-3411292:-1
so has part: feature:3402621-3411292:-1:exon
subclass of: SO_0000010

120059802
type: Gene
SIO_000068: ncbigene

position:3402621:-1
position: 3402621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3411292:-1
position: 3411292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3402621-3411292:-1:exon

LOC120059802
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120059802
product: synaptojanin 2 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_039008851.1
SIO_010081: LOC120059802
subclass of: SO_0000673
so part of: LOC120059802
location: complement(join(3402621..3403722,3403971..3404066,3404405..3404541,3411123..3411292))
location: region:3402621-3411292:-1
so has part: feature:3411123-3411292:-1:exon
so has part: feature:3404405-3404541:-1:exon
so has part: feature:3403971-3404066:-1:exon
so has part: feature:3402621-3403722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3411123-3411292:-1:exon

position:3411123:-1
position: 3411123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3404405-3404541:-1:exon

position:3404405:-1
position: 3404405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3404541:-1
position: 3404541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3403971-3404066:-1:exon

position:3403971:-1
position: 3403971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3404066:-1
position: 3404066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3402621-3403722:-1:exon

position:3403722:-1
position: 3403722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120059802
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120059802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-2-binding protein
translation: MNGSAMYTAPIVLDIKLKRGPQGLGFNIVGGLDQQYVLNDSGIYVAKIKENGAAALDGRLQEGDKILAINGHKLENLSHSAAVELFTSAGEDVQLRVQQRPTMVMNVPTSSRPDADSSVSSLGILVAVLGAAAAVTFLYMRFQPQLRRHF
SIO_010081: LOC120059802
subclass of: SO_0000673
so part of: LOC120059802
location: complement(join(3403570..3403722,3403971..3404066,3404405..3404541,3411123..3411189))
location: region:3403570-3411189:-1
so has part: feature:3411123-3411189:-1:exon
so has part: feature:3404405-3404541:-1:exon
so has part: feature:3403971-3404066:-1:exon
so has part: feature:3403570-3403722:-1:exon

XP_038864779.1
type: Protein
SIO_000068: ncbiprotein

position:3403570:-1
position: 3403570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3411189:-1
position: 3411189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3411123-3411189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404405-3404541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3403971-3404066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3403570-3403722:-1:exon

LOC120060114
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: LOC120060114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3419754..3422428)
location: region:3419754-3422428:-1
so has part: feature:3419754-3422428:-1:exon
subclass of: SO_0000010

120060114
type: Gene
SIO_000068: ncbigene

position:3419754:-1
position: 3419754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3422428:-1
position: 3422428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3419754-3422428:-1:exon

LOC120060114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: LOC120060114
product: spermidine/spermine N(1)-acetyltransferase-like protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009200.1
SIO_010081: LOC120060114
subclass of: SO_0000673
so part of: LOC120060114
location: complement(join(3419754..3420206,3420651..3421820,3421934..3421948,3422281..3422428))
location: region:3419754-3422428:-1
so has part: feature:3422281-3422428:-1:exon
so has part: feature:3421934-3421948:-1:exon
so has part: feature:3420651-3421820:-1:exon
so has part: feature:3419754-3420206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3422281-3422428:-1:exon

position:3422281:-1
position: 3422281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3421934-3421948:-1:exon

position:3421934:-1
position: 3421934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421948:-1
position: 3421948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3420651-3421820:-1:exon

position:3420651:-1
position: 3420651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421820:-1
position: 3421820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3419754-3420206:-1:exon

position:3420206:-1
position: 3420206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120060114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: LOC120060114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermidine/spermine N(1)-acetyltransferase-like protein 1
translation: MSRAKLRKRLTPTQPPPTPLRPLTQDGLVRPPEPPHSPLLLGDSLGGHSLVQGPQGSSLEVKDPSLPVPEHQGSILELPLSLVGSRPAQGYRHSTQLGLEPRDSAQLDLEPRGNTQLGLEPRGNTQLGLEPRDSTQLGLELQGNTQLGLEPQGNTQLGLEPRGNTQLGLEPRGNTQLGLEPRGNTQLGLELRGNTQLGLEPRGNTQLGLEPRGNTQLGLELRGNTQLGLEPRGNTQLSLEPRGNTQLGLEPRGNTQPGLEPRGNTQLGLEPRGNTQPGLEPRDSFLEPPCSTRLDPSKLVPEHPQDPTPMCLTQEPSLVGGCMGLEVQELPSLLQEAPSLVEPSLPSPLDHGVLEVVEASLPSPATQGPWDHTGGKRLQEACCPDIIYHIHHIFESTELFRFSAR
SIO_010081: LOC120060114
subclass of: SO_0000673
so part of: LOC120060114
location: complement(join(3420137..3420206,3420651..3421798))
location: region:3420137-3421798:-1
so has part: feature:3420651-3421798:-1:exon
so has part: feature:3420137-3420206:-1:exon

XP_038865128.1
type: Protein
SIO_000068: ncbiprotein

position:3420137:-1
position: 3420137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421798:-1
position: 3421798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3420651-3421798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3420137-3420206:-1:exon

LOC120060114
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8040
gene: LOC120060114
product: spermidine/spermine N(1)-acetyltransferase-like protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XR_005478187.1
SIO_010081: LOC120060114
so part of: LOC120060114
location: complement(join(3420159..3420206,3420337..3420405,3420651..3421820,3421934..3421948,3422281..3422428))
location: region:3420159-3422428:-1
so has part: feature:3422281-3422428:-1:exon
so has part: feature:3421934-3421948:-1:exon
so has part: feature:3420651-3421820:-1:exon
so has part: feature:3420337-3420405:-1:exon
so has part: feature:3420159-3420206:-1:exon

position:3420159:-1
position: 3420159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3422281-3422428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421934-3421948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3420651-3421820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3420337-3420405:-1:exon

position:3420337:-1
position: 3420337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420405:-1
position: 3420405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3420159-3420206:-1:exon

gmfb
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: gmfb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3422660..3429434
location: region:3422660-3429434:1
so has part: feature:3422660-3429434:1:exon
subclass of: SO_0000010

120060115
type: Gene
SIO_000068: ncbigene

position:3422660:1
position: 3422660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3429434:1
position: 3429434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3422660-3429434:1:exon

gmfb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: gmfb
product: glia maturation factor, beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_039009201.1
SIO_010081: gmfb
subclass of: SO_0000673
so part of: gmfb
location: join(3422660..3422764,3423801..3423897,3425260..3425309,3425459..3425508,3426287..3426369,3426905..3426978,3427177..3429434)
location: region:3422660-3429434:1
so has part: feature:3422660-3422764:1:exon
so has part: feature:3423801-3423897:1:exon
so has part: feature:3425260-3425309:1:exon
so has part: feature:3425459-3425508:1:exon
so has part: feature:3426287-3426369:1:exon
so has part: feature:3426905-3426978:1:exon
so has part: feature:3427177-3429434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3422660-3422764:1:exon

position:3422764:1
position: 3422764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3423801-3423897:1:exon

position:3423801:1
position: 3423801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3423897:1
position: 3423897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3425260-3425309:1:exon

position:3425260:1
position: 3425260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3425309:1
position: 3425309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3425459-3425508:1:exon

position:3425459:1
position: 3425459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3425508:1
position: 3425508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3426287-3426369:1:exon

position:3426287:1
position: 3426287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3426369:1
position: 3426369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3426905-3426978:1:exon

position:3426905:1
position: 3426905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3426978:1
position: 3426978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3427177-3429434:1:exon

position:3427177:1
position: 3427177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gmfb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: gmfb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glia maturation factor beta
translation: MSESLVVCDVDGDLVKKLREFRFRKETNNAAIIMKIDKDKQLVILDEEHEDISPDDLKDELPERQPRFVVYSYKYEHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTVQLTKVFEIRNTEDLTEEWLREKLGFFG
SIO_010081: gmfb
subclass of: SO_0000673
so part of: gmfb
location: join(3422762..3422764,3423801..3423897,3425260..3425309,3425459..3425508,3426287..3426369,3426905..3426978,3427177..3427248)
location: region:3422762-3427248:1
so has part: feature:3422762-3422764:1:exon
so has part: feature:3423801-3423897:1:exon
so has part: feature:3425260-3425309:1:exon
so has part: feature:3425459-3425508:1:exon
so has part: feature:3426287-3426369:1:exon
so has part: feature:3426905-3426978:1:exon
so has part: feature:3427177-3427248:1:exon

XP_038865129.1
type: Protein
SIO_000068: ncbiprotein

position:3422762:1
position: 3422762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3427248:1
position: 3427248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3422762-3422764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3423801-3423897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3425260-3425309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3425459-3425508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3426287-3426369:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3426905-3426978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3427177-3427248:1:exon

cnih1
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: cnih1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3430444..3442731
location: region:3430444-3442731:1
so has part: feature:3430444-3442731:1:exon
subclass of: SO_0000010

120060117
type: Gene
SIO_000068: ncbigene

position:3430444:1
position: 3430444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3442731:1
position: 3442731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3430444-3442731:1:exon

cnih1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: cnih1
product: cornichon family AMPA receptor auxiliary protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009203.1
SIO_010081: cnih1
subclass of: SO_0000673
so part of: cnih1
location: join(3430444..3430609,3431743..3431811,3436842..3436954,3438249..3438392,3441496..3442731)
location: region:3430444-3442731:1
so has part: feature:3430444-3430609:1:exon
so has part: feature:3431743-3431811:1:exon
so has part: feature:3436842-3436954:1:exon
so has part: feature:3438249-3438392:1:exon
so has part: feature:3441496-3442731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3430444-3430609:1:exon

position:3430609:1
position: 3430609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3431743-3431811:1:exon

position:3431743:1
position: 3431743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3431811:1
position: 3431811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3436842-3436954:1:exon

position:3436842:1
position: 3436842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3436954:1
position: 3436954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3438249-3438392:1:exon

position:3438249:1
position: 3438249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438392:1
position: 3438392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3441496-3442731:1:exon

position:3441496:1
position: 3441496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cnih1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: cnih1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cornichon homolog 1
translation: MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHVFFCVMFLCAAEWLTLGLNMPLLAYHVWRYMSRPVMSGPGLYDPTTIMNADILAFCQKEGWCKLAFYLLSFFYYLYGMIYVLVSS
SIO_010081: cnih1
subclass of: SO_0000673
so part of: cnih1
location: join(3430529..3430609,3431743..3431811,3436842..3436954,3438249..3438392,3441496..3441523)
location: region:3430529-3441523:1
so has part: feature:3430529-3430609:1:exon
so has part: feature:3431743-3431811:1:exon
so has part: feature:3436842-3436954:1:exon
so has part: feature:3438249-3438392:1:exon
so has part: feature:3441496-3441523:1:exon

XP_038865131.1
type: Protein
SIO_000068: ncbiprotein

position:3430529:1
position: 3430529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3441523:1
position: 3441523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3430529-3430609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3431743-3431811:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3436842-3436954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3438249-3438392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3441496-3441523:1:exon

cdkn3
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: cdkn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3442672..3445574)
location: region:3442672-3445574:-1
so has part: feature:3442672-3445574:-1:exon
subclass of: SO_0000010

120060116
type: Gene
SIO_000068: ncbigene

position:3442672:-1
position: 3442672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445574:-1
position: 3445574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3442672-3445574:-1:exon

cdkn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: cdkn3
product: cyclin-dependent kinase inhibitor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_039009202.1
SIO_010081: cdkn3
subclass of: SO_0000673
so part of: cdkn3
location: complement(join(3442672..3443500,3443717..3443820,3443912..3443943,3444164..3444386,3444709..3444809,3444950..3445044,3445463..3445574))
location: region:3442672-3445574:-1
so has part: feature:3445463-3445574:-1:exon
so has part: feature:3444950-3445044:-1:exon
so has part: feature:3444709-3444809:-1:exon
so has part: feature:3444164-3444386:-1:exon
so has part: feature:3443912-3443943:-1:exon
so has part: feature:3443717-3443820:-1:exon
so has part: feature:3442672-3443500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3445463-3445574:-1:exon

position:3445463:-1
position: 3445463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3444950-3445044:-1:exon

position:3444950:-1
position: 3444950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445044:-1
position: 3445044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3444709-3444809:-1:exon

position:3444709:-1
position: 3444709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444809:-1
position: 3444809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3444164-3444386:-1:exon

position:3444164:-1
position: 3444164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444386:-1
position: 3444386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3443912-3443943:-1:exon

position:3443912:-1
position: 3443912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3443943:-1
position: 3443943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3443717-3443820:-1:exon

position:3443717:-1
position: 3443717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3443820:-1
position: 3443820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3442672-3443500:-1:exon

position:3443500:-1
position: 3443500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cdkn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: cdkn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase inhibitor 3
translation: MRTSEFDSSSDEEEVCEEHRTPFQISWLPLSIVDCSLFLGICPLPGCKFKDIRRNLLRDVGELQNQGVQDVFVFCTRGELHKYRVPSLLETYRQQGLVVHHLPFPDGGTPELQQCCQILEGLQDNLHNNRKTVIHCYGGLGRSGLIAACLLLQLSVSMTPNKAIEILREHRGGGAIQTVKQYNFLHEFREKYSAYQETKAVSTERSVSR
SIO_010081: cdkn3
subclass of: SO_0000673
so part of: cdkn3
location: complement(join(3443411..3443500,3443717..3443820,3443912..3443943,3444164..3444386,3444709..3444809,3444950..3445029))
location: region:3443411-3445029:-1
so has part: feature:3444950-3445029:-1:exon
so has part: feature:3444709-3444809:-1:exon
so has part: feature:3444164-3444386:-1:exon
so has part: feature:3443912-3443943:-1:exon
so has part: feature:3443717-3443820:-1:exon
so has part: feature:3443411-3443500:-1:exon

XP_038865130.1
type: Protein
SIO_000068: ncbiprotein

position:3443411:-1
position: 3443411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445029:-1
position: 3445029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3444950-3445029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3444709-3444809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444164-3444386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3443912-3443943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3443717-3443820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3443411-3443500:-1:exon

sos2
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: sos2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3491529..3595163)
location: region:3491529-3595163:-1
so has part: feature:3491529-3595163:-1:exon
subclass of: SO_0000010

120060118
type: Gene
SIO_000068: ncbigene

position:3491529:-1
position: 3491529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3595163:-1
position: 3595163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491529-3595163:-1:exon

sos2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: sos2
product: son of sevenless homolog 2 (Drosophila)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039009204.1
SIO_010081: sos2
subclass of: SO_0000673
so part of: sos2
location: complement(join(3491529..3493169,3494913..3495016,3495399..3495440,3497164..3497419,3497681..3497797,3499614..3499786,3500011..3500128,3501595..3501757,3502239..3502358,3503938..3504160,3508821..3508933,3509373..3509495,3511247..3511328,3513794..3514449,3514652..3514779,3516598..3516696,3529647..3529757,3530286..3530429,3534828..3535034,3537074..3537238,3537910..3538041,3545865..3545990,3594151..3595163))
location: region:3491529-3595163:-1
so has part: feature:3594151-3595163:-1:exon
so has part: feature:3545865-3545990:-1:exon
so has part: feature:3537910-3538041:-1:exon
so has part: feature:3537074-3537238:-1:exon
so has part: feature:3534828-3535034:-1:exon
so has part: feature:3530286-3530429:-1:exon
so has part: feature:3529647-3529757:-1:exon
so has part: feature:3516598-3516696:-1:exon
so has part: feature:3514652-3514779:-1:exon
so has part: feature:3513794-3514449:-1:exon
so has part: feature:3511247-3511328:-1:exon
so has part: feature:3509373-3509495:-1:exon
so has part: feature:3508821-3508933:-1:exon
so has part: feature:3503938-3504160:-1:exon
so has part: feature:3502239-3502358:-1:exon
so has part: feature:3501595-3501757:-1:exon
so has part: feature:3500011-3500128:-1:exon
so has part: feature:3499614-3499786:-1:exon
so has part: feature:3497681-3497797:-1:exon
so has part: feature:3497164-3497419:-1:exon
so has part: feature:3495399-3495440:-1:exon
so has part: feature:3494913-3495016:-1:exon
so has part: feature:3491529-3493169:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3594151-3595163:-1:exon

position:3594151:-1
position: 3594151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3545865-3545990:-1:exon

position:3545865:-1
position: 3545865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3545990:-1
position: 3545990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3537910-3538041:-1:exon

position:3537910:-1
position: 3537910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3538041:-1
position: 3538041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3537074-3537238:-1:exon

position:3537074:-1
position: 3537074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3537238:-1
position: 3537238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3534828-3535034:-1:exon

position:3534828:-1
position: 3534828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3535034:-1
position: 3535034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3530286-3530429:-1:exon

position:3530286:-1
position: 3530286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3530429:-1
position: 3530429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3529647-3529757:-1:exon

position:3529647:-1
position: 3529647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3529757:-1
position: 3529757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3516598-3516696:-1:exon

position:3516598:-1
position: 3516598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3516696:-1
position: 3516696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3514652-3514779:-1:exon

position:3514652:-1
position: 3514652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3514779:-1
position: 3514779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3513794-3514449:-1:exon

position:3513794:-1
position: 3513794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3514449:-1
position: 3514449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3511247-3511328:-1:exon

position:3511247:-1
position: 3511247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3511328:-1
position: 3511328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3509373-3509495:-1:exon

position:3509373:-1
position: 3509373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3509495:-1
position: 3509495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3508821-3508933:-1:exon

position:3508821:-1
position: 3508821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508933:-1
position: 3508933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3503938-3504160:-1:exon

position:3503938:-1
position: 3503938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3504160:-1
position: 3504160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3502239-3502358:-1:exon

position:3502239:-1
position: 3502239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3502358:-1
position: 3502358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3501595-3501757:-1:exon

position:3501595:-1
position: 3501595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3501757:-1
position: 3501757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3500011-3500128:-1:exon

position:3500011:-1
position: 3500011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3500128:-1
position: 3500128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3499614-3499786:-1:exon

position:3499614:-1
position: 3499614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499786:-1
position: 3499786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3497681-3497797:-1:exon

position:3497681:-1
position: 3497681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3497797:-1
position: 3497797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3497164-3497419:-1:exon

position:3497164:-1
position: 3497164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3497419:-1
position: 3497419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3495399-3495440:-1:exon

position:3495399:-1
position: 3495399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495440:-1
position: 3495440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3494913-3495016:-1:exon

position:3494913:-1
position: 3494913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495016:-1
position: 3495016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3491529-3493169:-1:exon

position:3493169:-1
position: 3493169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sos2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: sos2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: son of sevenless homolog 2
translation: MQPQQIYDFSSDENSHKWRGLFVQALRKVQLQVHPNLSAKEGALQHIEELILQLLNMLCVAQPRSVQDVEERVQKTFPHPIDKWAIADAQSAIEKRKRRNPLLLPVDKIHPLLKEVLGYKIDYHVCLYIVAVLEYISADILKLAGNYVGNIRHYEISQQDIKVSMCADKVLMDMFDQDEDIGLVSQCTEEPSSSGELTYDDLVRLEIAEERQYLRELDLIIKVFRHHFLFNNKIFTPQDVEVIFSNILDIHELTVKLLGLIEDAVEMTADGSPHPLVGSCFEDLAEEQAFDPYETLSQDILSRQFHEHFSSLMARPTVGLYFQSIAEGFKEAVQYVLPQLMMVPVYHCLHYFELLQQLQEHSEEQDDRECLKQAITALLNLQCSVERIYAKHLPRRKPGEPMYRLYSRQVRSKQLAIKRMNEIQKSIDGWEGKDIGQCCSEFILEGALLRAGAKHERHNFLFDGLMISCKANQSSRLPGSGSGAEFRLKEKFVLRKVRIVDREDSAEFKHAFELVGKDENCVVFCARSTEEKGAWMAALVTLQYRSTLDRMLDTVLQHEEQAQPLRLPSPELYRFAVHDSEENIVFEDRVQSKTGIPIIKAGTVVKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLGLLIDRIEIPEPEPTEADKQALWNGDQPMAAELQRFRREYVQPVQLRVLNVFRQWVEHHFYDFENDPELRGRLEEYISSIIQLRGKSMRKWVESINKIIKRKMQTQSNGVSHNITFESPPPPIEWHISRLGQTDTFDLMTLHPIEIARQLTLLESELYRAVRPSELVGSVWTKEDKENNSPNLLRMIRHTTNLTLWFEKCIVEAENLDERVAVFTRVIEILQVFQELNNFNGVLEVVSAINSVPVYRLDHTFEAVPERKKRILEEAVELSQDHFKKYLAKLKSINPPCVPFFGIYLTNILKTEEGNPDFLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLKVQQDIKRFFENLNPMGSLGEKEFSDYLFNKSQEIEPRNCKQPPRFPRKTLYPLKSPGIRPVRTSTSGTLKGHPVPLEREPPHKITFRSIAETEPETSSTAPTSPNTPTPPQSATSDLISVFMEQDLCNSYGGNSIFANVLLPPSKVQSVSCGSLHQLGENLLKPPPLPPRRKDAFSEAKLSSRSDSPPAIPPRLPPPLPRIQPRAPVYNGPSDGPLSSPPPPPPRDPQPDTPPPIPQRPPEIFINYPLNLQPSPVGRFHWDFGSSPSSPGTPPGTPSPRVPRRSCLLSASQNSLCPLPLPIMAPPVPPRHNSSSQLPKLPPKTYKRELLPPPLQSLSLVENTDTSQ
SIO_010081: sos2
subclass of: SO_0000673
so part of: sos2
location: complement(join(3492666..3493169,3494913..3495016,3495399..3495440,3497164..3497419,3497681..3497797,3499614..3499786,3500011..3500128,3501595..3501757,3502239..3502358,3503938..3504160,3508821..3508933,3509373..3509495,3511247..3511328,3513794..3514449,3514652..3514779,3516598..3516696,3529647..3529757,3530286..3530429,3534828..3535034,3537074..3537238,3537910..3538041,3545865..3545990,3594151..3594234))
location: region:3492666-3594234:-1
so has part: feature:3594151-3594234:-1:exon
so has part: feature:3545865-3545990:-1:exon
so has part: feature:3537910-3538041:-1:exon
so has part: feature:3537074-3537238:-1:exon
so has part: feature:3534828-3535034:-1:exon
so has part: feature:3530286-3530429:-1:exon
so has part: feature:3529647-3529757:-1:exon
so has part: feature:3516598-3516696:-1:exon
so has part: feature:3514652-3514779:-1:exon
so has part: feature:3513794-3514449:-1:exon
so has part: feature:3511247-3511328:-1:exon
so has part: feature:3509373-3509495:-1:exon
so has part: feature:3508821-3508933:-1:exon
so has part: feature:3503938-3504160:-1:exon
so has part: feature:3502239-3502358:-1:exon
so has part: feature:3501595-3501757:-1:exon
so has part: feature:3500011-3500128:-1:exon
so has part: feature:3499614-3499786:-1:exon
so has part: feature:3497681-3497797:-1:exon
so has part: feature:3497164-3497419:-1:exon
so has part: feature:3495399-3495440:-1:exon
so has part: feature:3494913-3495016:-1:exon
so has part: feature:3492666-3493169:-1:exon

XP_038865132.1
type: Protein
SIO_000068: ncbiprotein

position:3492666:-1
position: 3492666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3594234:-1
position: 3594234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3594151-3594234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3545865-3545990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3537910-3538041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3537074-3537238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3534828-3535034:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3530286-3530429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3529647-3529757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3516598-3516696:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3514652-3514779:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513794-3514449:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3511247-3511328:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3509373-3509495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3508821-3508933:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3503938-3504160:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3502239-3502358:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3501595-3501757:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3500011-3500128:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3499614-3499786:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3497681-3497797:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3497164-3497419:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3495399-3495440:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3494913-3495016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3492666-3493169:-1:exon

l2hgdh
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: l2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3599284..3631431)
location: region:3599284-3631431:-1
so has part: feature:3599284-3631431:-1:exon
subclass of: SO_0000010

120060119
type: Gene
SIO_000068: ncbigene

position:3599284:-1
position: 3599284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3631431:-1
position: 3631431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3599284-3631431:-1:exon

l2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: l2hgdh
product: L-2-hydroxyglutarate dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009206.1
SIO_010081: l2hgdh
subclass of: SO_0000673
so part of: l2hgdh
location: complement(join(3599284..3600337,3604509..3604640,3605259..3605416,3616808..3616975,3617184..3617218,3617324..3617486,3619214..3619345,3620652..3620803,3621074..3621189,3631179..3631431))
location: region:3599284-3631431:-1
so has part: feature:3631179-3631431:-1:exon
so has part: feature:3621074-3621189:-1:exon
so has part: feature:3620652-3620803:-1:exon
so has part: feature:3619214-3619345:-1:exon
so has part: feature:3617324-3617486:-1:exon
so has part: feature:3617184-3617218:-1:exon
so has part: feature:3616808-3616975:-1:exon
so has part: feature:3605259-3605416:-1:exon
so has part: feature:3604509-3604640:-1:exon
so has part: feature:3599284-3600337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3631179-3631431:-1:exon

position:3631179:-1
position: 3631179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3621074-3621189:-1:exon

position:3621074:-1
position: 3621074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3621189:-1
position: 3621189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3620652-3620803:-1:exon

position:3620652:-1
position: 3620652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3620803:-1
position: 3620803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3619214-3619345:-1:exon

position:3619214:-1
position: 3619214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3619345:-1
position: 3619345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3617324-3617486:-1:exon

position:3617324:-1
position: 3617324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3617486:-1
position: 3617486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3617184-3617218:-1:exon

position:3617184:-1
position: 3617184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3617218:-1
position: 3617218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3616808-3616975:-1:exon

position:3616808:-1
position: 3616808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3616975:-1
position: 3616975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3605259-3605416:-1:exon

position:3605259:-1
position: 3605259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3605416:-1
position: 3605416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3604509-3604640:-1:exon

position:3604509:-1
position: 3604509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3604640:-1
position: 3604640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3599284-3600337:-1:exon

position:3600337:-1
position: 3600337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

l2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: l2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-2-hydroxyglutarate dehydrogenase, mitochondrial
translation: MIRTLNSASLAALFATVPKSTTCRTARIHSTYDVAVVGGGIVGLASARELILRHPTLSFILLEKEKDLAIHQSGHNSGVIHSGIYYTPGSLKARLCGKGATMAYEYLDKKGLPYKRCGKLIVAVEREEIPRLKALYERGQENNVRDLTMIDAKGIREREPYCRGLLALDSPYTGIVDWRLVSLAYGKDFQEAGGTVVTEYEASDMAMVKESPAGNTDGMKYPIAIRDSKGKEVRCRYVLTCGGLYSDRLAQISGCSPDPRIVPFRGDYLVLKPEKHYLVRGNIYPVPDPKFPFLGVHFTPRMDGSVWLGPNAVLAFKREGYKLYDFDARDFGDALSFRGLQKLVMNNLVYGVGEMYRGVFIGAQVKILKKFIPELSLSDVLRGPSGVRAQALDRDGNLVDDFVFDVGVGDVGSRVLHVRNAPSPAATSSLAIAEMVADEVERRFSL
SIO_010081: l2hgdh
subclass of: SO_0000673
so part of: l2hgdh
location: complement(join(3600142..3600337,3604509..3604640,3605259..3605416,3616808..3616975,3617184..3617218,3617324..3617486,3619214..3619345,3620652..3620803,3621074..3621189,3631179..3631267))
location: region:3600142-3631267:-1
so has part: feature:3631179-3631267:-1:exon
so has part: feature:3621074-3621189:-1:exon
so has part: feature:3620652-3620803:-1:exon
so has part: feature:3619214-3619345:-1:exon
so has part: feature:3617324-3617486:-1:exon
so has part: feature:3617184-3617218:-1:exon
so has part: feature:3616808-3616975:-1:exon
so has part: feature:3605259-3605416:-1:exon
so has part: feature:3604509-3604640:-1:exon
so has part: feature:3600142-3600337:-1:exon

XP_038865134.1
type: Protein
SIO_000068: ncbiprotein

position:3600142:-1
position: 3600142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3631267:-1
position: 3631267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3631179-3631267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3621074-3621189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3620652-3620803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3619214-3619345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3617324-3617486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3617184-3617218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3616808-3616975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3605259-3605416:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3604509-3604640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3600142-3600337:-1:exon

dmac2l
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: dmac2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3631478..3635199
location: region:3631478-3635199:1
so has part: feature:3631478-3635199:1:exon
subclass of: SO_0000010

120060120
type: Gene
SIO_000068: ncbigene

position:3631478:1
position: 3631478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3635199:1
position: 3635199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3631478-3635199:1:exon

dmac2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: dmac2l
product: distal membrane arm assembly complex 2 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039009207.1
SIO_010081: dmac2l
subclass of: SO_0000673
so part of: dmac2l
location: join(3631478..3631560,3632739..3632858,3633090..3633298,3634240..3634411,3634652..3635199)
location: region:3631478-3635199:1
so has part: feature:3631478-3631560:1:exon
so has part: feature:3632739-3632858:1:exon
so has part: feature:3633090-3633298:1:exon
so has part: feature:3634240-3634411:1:exon
so has part: feature:3634652-3635199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3631478-3631560:1:exon

position:3631560:1
position: 3631560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3632739-3632858:1:exon

position:3632739:1
position: 3632739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3632858:1
position: 3632858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3633090-3633298:1:exon

position:3633090:1
position: 3633090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3633298:1
position: 3633298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3634240-3634411:1:exon

position:3634240:1
position: 3634240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634411:1
position: 3634411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3634652-3635199:1:exon

position:3634652:1
position: 3634652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dmac2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: dmac2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit s, mitochondrial
translation: MRLLSKAALQTVLSSQKTLSLEGSRPFWGWLNAVFNKVDYERIKAVGPDRAAAEWLTRCGAKVRFQGFDRWQHDYNGLPTGPLGRYKIQGIDATDSCIMYKGFDHLDGLEHVEELKLNKSMYIEDACLERISTIENLQASLYKMEVVSCGNVTDKGIIALHKLRSLEHLYLSDLPGVVEKEKTVERLQTALPGLDIELDLV
SIO_010081: dmac2l
subclass of: SO_0000673
so part of: dmac2l
location: join(3632749..3632858,3633090..3633298,3634240..3634411,3634652..3634766)
location: region:3632749-3634766:1
so has part: feature:3632749-3632858:1:exon
so has part: feature:3633090-3633298:1:exon
so has part: feature:3634240-3634411:1:exon
so has part: feature:3634652-3634766:1:exon

XP_038865135.1
type: Protein
SIO_000068: ncbiprotein

position:3632749:1
position: 3632749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634766:1
position: 3634766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3632749-3632858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3633090-3633298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3634240-3634411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3634652-3634766:1:exon

cdkl1
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: cdkl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3636337..3657827)
location: region:3636337-3657827:-1
so has part: feature:3636337-3657827:-1:exon
subclass of: SO_0000010

120060121
type: Gene
SIO_000068: ncbigene

position:3636337:-1
position: 3636337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657827:-1
position: 3657827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3636337-3657827:-1:exon

cdkl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: cdkl1
product: cyclin-dependent kinase-like 1 (CDC2-related kinase), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039009208.1
SIO_010081: cdkl1
subclass of: SO_0000673
so part of: cdkl1
location: complement(join(3636337..3637503,3637633..3637728,3637817..3637981,3638135..3638191,3638556..3638638,3639300..3639500,3640092..3640182,3640956..3641028,3643362..3643483,3656389..3656660,3657642..3657827))
location: region:3636337-3657827:-1
so has part: feature:3657642-3657827:-1:exon
so has part: feature:3656389-3656660:-1:exon
so has part: feature:3643362-3643483:-1:exon
so has part: feature:3640956-3641028:-1:exon
so has part: feature:3640092-3640182:-1:exon
so has part: feature:3639300-3639500:-1:exon
so has part: feature:3638556-3638638:-1:exon
so has part: feature:3638135-3638191:-1:exon
so has part: feature:3637817-3637981:-1:exon
so has part: feature:3637633-3637728:-1:exon
so has part: feature:3636337-3637503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3657642-3657827:-1:exon

position:3657642:-1
position: 3657642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3656389-3656660:-1:exon

position:3656389:-1
position: 3656389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3656660:-1
position: 3656660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3643362-3643483:-1:exon

position:3643362:-1
position: 3643362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3643483:-1
position: 3643483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3640956-3641028:-1:exon

position:3640956:-1
position: 3640956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3641028:-1
position: 3641028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3640092-3640182:-1:exon

position:3640092:-1
position: 3640092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3640182:-1
position: 3640182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3639300-3639500:-1:exon

position:3639300:-1
position: 3639300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3639500:-1
position: 3639500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3638556-3638638:-1:exon

position:3638556:-1
position: 3638556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3638638:-1
position: 3638638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3638135-3638191:-1:exon

position:3638135:-1
position: 3638135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3638191:-1
position: 3638191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3637817-3637981:-1:exon

position:3637817:-1
position: 3637817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637981:-1
position: 3637981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3637633-3637728:-1:exon

position:3637633:-1
position: 3637633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637728:-1
position: 3637728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3636337-3637503:-1:exon

position:3637503:-1
position: 3637503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cdkl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: cdkl1
product: cyclin-dependent kinase-like 1 (CDC2-related kinase), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_039009209.1
SIO_010081: cdkl1
subclass of: SO_0000673
so part of: cdkl1
location: complement(join(3636337..3637503,3637817..3637981,3638135..3638191,3638556..3638638,3639300..3639500,3640092..3640182,3640956..3641028,3643362..3643483,3656389..3656660,3657642..3657826))
location: region:3636337-3657826:-1
so has part: feature:3657642-3657826:-1:exon
so has part: feature:3656389-3656660:-1:exon
so has part: feature:3643362-3643483:-1:exon
so has part: feature:3640956-3641028:-1:exon
so has part: feature:3640092-3640182:-1:exon
so has part: feature:3639300-3639500:-1:exon
so has part: feature:3638556-3638638:-1:exon
so has part: feature:3638135-3638191:-1:exon
so has part: feature:3637817-3637981:-1:exon
so has part: feature:3636337-3637503:-1:exon

position:3657826:-1
position: 3657826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657642-3657826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3656389-3656660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3643362-3643483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3640956-3641028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3640092-3640182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3639300-3639500:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3638556-3638638:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3638135-3638191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3637817-3637981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3636337-3637503:-1:exon

cdkl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: cdkl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase-like 1 isoform X2
translation: MSISILLSRCVCQFSVLSALNFLFCKVYIQTTPGHLKERVSWTKTSVNLLDLVDCSATTTTPSQSSDITMEKYEKMGKIGEGSYGVVFKCRNRDTGQIVAIKKFVESEDDPVIKRIALREIRMLKQLKHSNLVNLIEVFRRKRKLHLVFEYCDHTVLNELDRYPRGVPEHLVKSITWQTLQAVNFCHKQNCIHRDVKPENILITKQQVIKLCDFGFARILTGPCDYYTDYVATRWYRAPELLVGDTQYGAPVDVWALGCVFSELLSGIPLWPGKSDMDQLYLIRKTLGDLIPRHQQVFSKNQFFSGVCIPEPQEMETLELKYPNLSYQALSLMKGCLRMDPSERLTCEQLLEHPYFDSQREESESTGREHDRSTKKRSRLLPRKHLPPGYLPQLTSSSIFPALDNKKYYTSLRKFNYHFPNI
SIO_010081: cdkl1
subclass of: SO_0000673
so part of: cdkl1
location: complement(join(3637402..3637503,3637817..3637981,3638135..3638191,3638556..3638638,3639300..3639500,3640092..3640182,3640956..3641028,3643362..3643483,3656389..3656660,3657642..3657744))
location: region:3637402-3657744:-1
so has part: feature:3657642-3657744:-1:exon
so has part: feature:3656389-3656660:-1:exon
so has part: feature:3643362-3643483:-1:exon
so has part: feature:3640956-3641028:-1:exon
so has part: feature:3640092-3640182:-1:exon
so has part: feature:3639300-3639500:-1:exon
so has part: feature:3638556-3638638:-1:exon
so has part: feature:3638135-3638191:-1:exon
so has part: feature:3637817-3637981:-1:exon
so has part: feature:3637402-3637503:-1:exon

XP_038865137.1
type: Protein
SIO_000068: ncbiprotein

position:3637402:-1
position: 3637402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657744:-1
position: 3657744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657642-3657744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3656389-3656660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3643362-3643483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3640956-3641028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3640092-3640182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3639300-3639500:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3638556-3638638:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3638135-3638191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3637817-3637981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3637402-3637503:-1:exon

cdkl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: cdkl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase-like 1 isoform X1
translation: MSISILLSRCVCQFSVLSALNFLFCKVYIQTTPGHLKERVSWTKTSVNLLDLVDCSATTTTPSQSSDITMEKYEKMGKIGEGSYGVVFKCRNRDTGQIVAIKKFVESEDDPVIKRIALREIRMLKQLKHSNLVNLIEVFRRKRKLHLVFEYCDHTVLNELDRYPRGVPEHLVKSITWQTLQAVNFCHKQNCIHRDVKPENILITKQQVIKLCDFGFARILTGPCDYYTDYVATRWYRAPELLVGDTQYGAPVDVWALGCVFSELLSGIPLWPGKSDMDQLYLIRKTLGDLIPRHQQVFSKNQFFSGVCIPEPQEMETLELKYPNLSYQALSLMKGCLRMDPSERLTCEQLLEHPYFDSQREESESTGREHDRSTKKRSRLLPRKHLPPGICKVELGSNMVEAPCKLGPAVRDGKMLYKQLKYLPQLTSSSIFPALDNKKYYTSLRKFNYHFPNI
SIO_010081: cdkl1
subclass of: SO_0000673
so part of: cdkl1
location: complement(join(3637402..3637503,3637633..3637728,3637817..3637981,3638135..3638191,3638556..3638638,3639300..3639500,3640092..3640182,3640956..3641028,3643362..3643483,3656389..3656660,3657642..3657744))
location: region:3637402-3657744:-1
so has part: feature:3657642-3657744:-1:exon
so has part: feature:3656389-3656660:-1:exon
so has part: feature:3643362-3643483:-1:exon
so has part: feature:3640956-3641028:-1:exon
so has part: feature:3640092-3640182:-1:exon
so has part: feature:3639300-3639500:-1:exon
so has part: feature:3638556-3638638:-1:exon
so has part: feature:3638135-3638191:-1:exon
so has part: feature:3637817-3637981:-1:exon
so has part: feature:3637633-3637728:-1:exon
so has part: feature:3637402-3637503:-1:exon

XP_038865136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3657642-3657744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3656389-3656660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3643362-3643483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3640956-3641028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3640092-3640182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3639300-3639500:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3638556-3638638:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3638135-3638191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3637817-3637981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3637633-3637728:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3637402-3637503:-1:exon

map4k5
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: map4k5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3667070..3780482)
location: region:3667070-3780482:-1
so has part: feature:3667070-3780482:-1:exon
subclass of: SO_0000010

120060122
type: Gene
SIO_000068: ncbigene

position:3667070:-1
position: 3667070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780482:-1
position: 3780482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3667070-3780482:-1:exon

map4k5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: map4k5
product: mitogen-activated protein kinase kinase kinase kinase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039009210.1
SIO_010081: map4k5
subclass of: SO_0000673
so part of: map4k5
location: complement(join(3667070..3668100,3669749..3669804,3682839..3682909,3683400..3683492,3685791..3685859,3688450..3688627,3695885..3695988,3708653..3708711,3709615..3709729,3718170..3718230,3720331..3720410,3720973..3721057,3721862..3721903,3724043..3724134,3727064..3727139,3728650..3728784,3731727..3731769,3731946..3731990,3740630..3740697,3742355..3742413,3746231..3746309,3750308..3750424,3751484..3751565,3751654..3751716,3752452..3752583,3755776..3755848,3755955..3755997,3757919..3757966,3760391..3760446,3762030..3762094,3765139..3765229,3772510..3772567,3779117..3779402,3780340..3780482))
location: region:3667070-3780482:-1
so has part: feature:3780340-3780482:-1:exon
so has part: feature:3779117-3779402:-1:exon
so has part: feature:3772510-3772567:-1:exon
so has part: feature:3765139-3765229:-1:exon
so has part: feature:3762030-3762094:-1:exon
so has part: feature:3760391-3760446:-1:exon
so has part: feature:3757919-3757966:-1:exon
so has part: feature:3755955-3755997:-1:exon
so has part: feature:3755776-3755848:-1:exon
so has part: feature:3752452-3752583:-1:exon
so has part: feature:3751654-3751716:-1:exon
so has part: feature:3751484-3751565:-1:exon
so has part: feature:3750308-3750424:-1:exon
so has part: feature:3746231-3746309:-1:exon
so has part: feature:3742355-3742413:-1:exon
so has part: feature:3740630-3740697:-1:exon
so has part: feature:3731946-3731990:-1:exon
so has part: feature:3731727-3731769:-1:exon
so has part: feature:3728650-3728784:-1:exon
so has part: feature:3727064-3727139:-1:exon
so has part: feature:3724043-3724134:-1:exon
so has part: feature:3721862-3721903:-1:exon
so has part: feature:3720973-3721057:-1:exon
so has part: feature:3720331-3720410:-1:exon
so has part: feature:3718170-3718230:-1:exon
so has part: feature:3709615-3709729:-1:exon
so has part: feature:3708653-3708711:-1:exon
so has part: feature:3695885-3695988:-1:exon
so has part: feature:3688450-3688627:-1:exon
so has part: feature:3685791-3685859:-1:exon
so has part: feature:3683400-3683492:-1:exon
so has part: feature:3682839-3682909:-1:exon
so has part: feature:3669749-3669804:-1:exon
so has part: feature:3667070-3668100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3780340-3780482:-1:exon

position:3780340:-1
position: 3780340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3779117-3779402:-1:exon

position:3779117:-1
position: 3779117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779402:-1
position: 3779402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3772510-3772567:-1:exon

position:3772510:-1
position: 3772510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772567:-1
position: 3772567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3765139-3765229:-1:exon

position:3765139:-1
position: 3765139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3765229:-1
position: 3765229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3762030-3762094:-1:exon

position:3762030:-1
position: 3762030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3762094:-1
position: 3762094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3760391-3760446:-1:exon

position:3760391:-1
position: 3760391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3760446:-1
position: 3760446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3757919-3757966:-1:exon

position:3757919:-1
position: 3757919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3757966:-1
position: 3757966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3755955-3755997:-1:exon

position:3755955:-1
position: 3755955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3755997:-1
position: 3755997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3755776-3755848:-1:exon

position:3755776:-1
position: 3755776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3755848:-1
position: 3755848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3752452-3752583:-1:exon

position:3752452:-1
position: 3752452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3752583:-1
position: 3752583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3751654-3751716:-1:exon

position:3751654:-1
position: 3751654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3751716:-1
position: 3751716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3751484-3751565:-1:exon

position:3751484:-1
position: 3751484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3751565:-1
position: 3751565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3750308-3750424:-1:exon

position:3750308:-1
position: 3750308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3750424:-1
position: 3750424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3746231-3746309:-1:exon

position:3746231:-1
position: 3746231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3746309:-1
position: 3746309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3742355-3742413:-1:exon

position:3742355:-1
position: 3742355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3742413:-1
position: 3742413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3740630-3740697:-1:exon

position:3740630:-1
position: 3740630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3740697:-1
position: 3740697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3731946-3731990:-1:exon

position:3731946:-1
position: 3731946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3731990:-1
position: 3731990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3731727-3731769:-1:exon

position:3731727:-1
position: 3731727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3731769:-1
position: 3731769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3728650-3728784:-1:exon

position:3728650:-1
position: 3728650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3728784:-1
position: 3728784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3727064-3727139:-1:exon

position:3727064:-1
position: 3727064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3727139:-1
position: 3727139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3724043-3724134:-1:exon

position:3724043:-1
position: 3724043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3724134:-1
position: 3724134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3721862-3721903:-1:exon

position:3721862:-1
position: 3721862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3721903:-1
position: 3721903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3720973-3721057:-1:exon

position:3720973:-1
position: 3720973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3721057:-1
position: 3721057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3720331-3720410:-1:exon

position:3720331:-1
position: 3720331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3720410:-1
position: 3720410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3718170-3718230:-1:exon

position:3718170:-1
position: 3718170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3718230:-1
position: 3718230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3709615-3709729:-1:exon

position:3709615:-1
position: 3709615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3709729:-1
position: 3709729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3708653-3708711:-1:exon

position:3708653:-1
position: 3708653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3708711:-1
position: 3708711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3695885-3695988:-1:exon

position:3695885:-1
position: 3695885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3695988:-1
position: 3695988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3688450-3688627:-1:exon

position:3688450:-1
position: 3688450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3688627:-1
position: 3688627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3685791-3685859:-1:exon

position:3685791:-1
position: 3685791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3685859:-1
position: 3685859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3683400-3683492:-1:exon

position:3683400:-1
position: 3683400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3683492:-1
position: 3683492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3682839-3682909:-1:exon

position:3682839:-1
position: 3682839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3682909:-1
position: 3682909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3669749-3669804:-1:exon

position:3669749:-1
position: 3669749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3669804:-1
position: 3669804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3667070-3668100:-1:exon

position:3668100:-1
position: 3668100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

map4k5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: map4k5
product: mitogen-activated protein kinase kinase kinase kinase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039009211.1
SIO_010081: map4k5
subclass of: SO_0000673
so part of: map4k5
location: complement(join(3667070..3668100,3669749..3669804,3682839..3682909,3683400..3683492,3685791..3685859,3688450..3688627,3695885..3695988,3708653..3708711,3709615..3709729,3718170..3718230,3720331..3720410,3720973..3721057,3721862..3721903,3724043..3724134,3727064..3727139,3728650..3728784,3731727..3731769,3731946..3731990,3740630..3740697,3742355..3742413,3746231..3746309,3750308..3750424,3751484..3751565,3751654..3751716,3752452..3752583,3755776..3755848,3755955..3755997,3757919..3757966,3760391..3760446,3765139..3765232))
location: region:3667070-3765232:-1
so has part: feature:3765139-3765232:-1:exon
so has part: feature:3760391-3760446:-1:exon
so has part: feature:3757919-3757966:-1:exon
so has part: feature:3755955-3755997:-1:exon
so has part: feature:3755776-3755848:-1:exon
so has part: feature:3752452-3752583:-1:exon
so has part: feature:3751654-3751716:-1:exon
so has part: feature:3751484-3751565:-1:exon
so has part: feature:3750308-3750424:-1:exon
so has part: feature:3746231-3746309:-1:exon
so has part: feature:3742355-3742413:-1:exon
so has part: feature:3740630-3740697:-1:exon
so has part: feature:3731946-3731990:-1:exon
so has part: feature:3731727-3731769:-1:exon
so has part: feature:3728650-3728784:-1:exon
so has part: feature:3727064-3727139:-1:exon
so has part: feature:3724043-3724134:-1:exon
so has part: feature:3721862-3721903:-1:exon
so has part: feature:3720973-3721057:-1:exon
so has part: feature:3720331-3720410:-1:exon
so has part: feature:3718170-3718230:-1:exon
so has part: feature:3709615-3709729:-1:exon
so has part: feature:3708653-3708711:-1:exon
so has part: feature:3695885-3695988:-1:exon
so has part: feature:3688450-3688627:-1:exon
so has part: feature:3685791-3685859:-1:exon
so has part: feature:3683400-3683492:-1:exon
so has part: feature:3682839-3682909:-1:exon
so has part: feature:3669749-3669804:-1:exon
so has part: feature:3667070-3668100:-1:exon

position:3765232:-1
position: 3765232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3765139-3765232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3760391-3760446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3757919-3757966:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3755955-3755997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755776-3755848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3752452-3752583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3751654-3751716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3751484-3751565:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3750308-3750424:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3746231-3746309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3742355-3742413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3740630-3740697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3731946-3731990:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3731727-3731769:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3728650-3728784:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3727064-3727139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3724043-3724134:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3721862-3721903:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3720973-3721057:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3720331-3720410:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3718170-3718230:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3709615-3709729:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3708653-3708711:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3695885-3695988:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3688450-3688627:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3685791-3685859:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3683400-3683492:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3682839-3682909:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3669749-3669804:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3667070-3668100:-1:exon

map4k5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: map4k5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase kinase 5 isoform X1
translation: MDIFPRPSGEIQRKNPQQDFELIQRVGSGTYGDVYKARNIQTGELAAVKIIKLEPGDDFSIIQQEIFMVKECMHHNIVAYFGSYLCRDKLWICMEYCGGGSLQDIYHVTGPLSEPQIAYVCRETIQGLGYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITSIELAELQPPMFDLHPMRALFLMSKSSFQPPKLKDKVKWSTAFHNFVKVSLTKNPKKRPTAEKLLSHLFIDQTGLTRRVAVELLDKMNNPDNHQHFSEVDDDDLESLSVVRHTIRSINKHPRPERTHSEISFDKVKFEPPLRKETEAHTEMDVTKQSDFPSPWSPFAEGGITTRGHMAHLEDAFEDVELSTLKHGIPPPLPPKPHLNSLSDELGLSDERCLTVRRFPGSESSPGLVPRRLSTPEQGNKVEHPSPDYLSASVSSPGILSTASDPEHEDCDGGGVNGDSPKTPPSRPQRKEKKDYPKPAINGLPPTPKVLMGACFSKVFDGCPLKINCATSWIHPDTKDQYLIFGTEDGIYTLNLNELHEATMEQLFPRKCTWLYIINNNLMSLSGKTFQLYSHNLIGLFEQLKKPGLASQFQTHRFPDKILPRRFALTTKIPDTKGCHKCCIVRNPYTGHKYLCGALQSGIVLLQWYEPMQRFMLIKHFDFPLPSPLKVFEMLVVPEQEYPMVCIAVSQATEPGQVVRFETINLNSCSSWFTEMGTTGQAVDAIHVTQLERDTVLVCLDKNLKIVNLMGRLKSNKKLASELSFDFAIGSVVCLQDSVLAFWKHGMQGKSFKSNEITQEISDPSRVFRLLGSDRVVVLESRPTDNPTALSNLYILAGHENSY
SIO_010081: map4k5
subclass of: SO_0000673
so part of: map4k5
location: complement(join(3668013..3668100,3669749..3669804,3682839..3682909,3683400..3683492,3685791..3685859,3688450..3688627,3695885..3695988,3708653..3708711,3709615..3709729,3718170..3718230,3720331..3720410,3720973..3721057,3721862..3721903,3724043..3724134,3727064..3727139,3728650..3728784,3731727..3731769,3731946..3731990,3740630..3740697,3742355..3742413,3746231..3746309,3750308..3750424,3751484..3751565,3751654..3751716,3752452..3752583,3755776..3755848,3755955..3755997,3757919..3757966,3760391..3760446,3762030..3762094,3765139..3765229,3772510..3772567,3779117..3779224))
location: region:3668013-3779224:-1
so has part: feature:3779117-3779224:-1:exon
so has part: feature:3772510-3772567:-1:exon
so has part: feature:3765139-3765229:-1:exon
so has part: feature:3762030-3762094:-1:exon
so has part: feature:3760391-3760446:-1:exon
so has part: feature:3757919-3757966:-1:exon
so has part: feature:3755955-3755997:-1:exon
so has part: feature:3755776-3755848:-1:exon
so has part: feature:3752452-3752583:-1:exon
so has part: feature:3751654-3751716:-1:exon
so has part: feature:3751484-3751565:-1:exon
so has part: feature:3750308-3750424:-1:exon
so has part: feature:3746231-3746309:-1:exon
so has part: feature:3742355-3742413:-1:exon
so has part: feature:3740630-3740697:-1:exon
so has part: feature:3731946-3731990:-1:exon
so has part: feature:3731727-3731769:-1:exon
so has part: feature:3728650-3728784:-1:exon
so has part: feature:3727064-3727139:-1:exon
so has part: feature:3724043-3724134:-1:exon
so has part: feature:3721862-3721903:-1:exon
so has part: feature:3720973-3721057:-1:exon
so has part: feature:3720331-3720410:-1:exon
so has part: feature:3718170-3718230:-1:exon
so has part: feature:3709615-3709729:-1:exon
so has part: feature:3708653-3708711:-1:exon
so has part: feature:3695885-3695988:-1:exon
so has part: feature:3688450-3688627:-1:exon
so has part: feature:3685791-3685859:-1:exon
so has part: feature:3683400-3683492:-1:exon
so has part: feature:3682839-3682909:-1:exon
so has part: feature:3669749-3669804:-1:exon
so has part: feature:3668013-3668100:-1:exon

XP_038865138.1
type: Protein
SIO_000068: ncbiprotein

position:3668013:-1
position: 3668013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779224:-1
position: 3779224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779117-3779224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3772510-3772567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3765139-3765229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762030-3762094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3760391-3760446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3757919-3757966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3755955-3755997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3755776-3755848:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3752452-3752583:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3751654-3751716:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3751484-3751565:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3750308-3750424:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3746231-3746309:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3742355-3742413:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3740630-3740697:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3731946-3731990:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3731727-3731769:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3728650-3728784:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727064-3727139:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3724043-3724134:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3721862-3721903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3720973-3721057:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3720331-3720410:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3718170-3718230:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3709615-3709729:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3708653-3708711:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3695885-3695988:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3688450-3688627:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3685791-3685859:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3683400-3683492:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3682839-3682909:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3669749-3669804:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3668013-3668100:-1:exon

map4k5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8040
gene: map4k5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase kinase 5 isoform X2
translation: MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITSIELAELQPPMFDLHPMRALFLMSKSSFQPPKLKDKVKWSTAFHNFVKVSLTKNPKKRPTAEKLLSHLFIDQTGLTRRVAVELLDKMNNPDNHQHFSEVDDDDLESLSVVRHTIRSINKHPRPERTHSEISFDKVKFEPPLRKETEAHTEMDVTKQSDFPSPWSPFAEGGITTRGHMAHLEDAFEDVELSTLKHGIPPPLPPKPHLNSLSDELGLSDERCLTVRRFPGSESSPGLVPRRLSTPEQGNKVEHPSPDYLSASVSSPGILSTASDPEHEDCDGGGVNGDSPKTPPSRPQRKEKKDYPKPAINGLPPTPKVLMGACFSKVFDGCPLKINCATSWIHPDTKDQYLIFGTEDGIYTLNLNELHEATMEQLFPRKCTWLYIINNNLMSLSGKTFQLYSHNLIGLFEQLKKPGLASQFQTHRFPDKILPRRFALTTKIPDTKGCHKCCIVRNPYTGHKYLCGALQSGIVLLQWYEPMQRFMLIKHFDFPLPSPLKVFEMLVVPEQEYPMVCIAVSQATEPGQVVRFETINLNSCSSWFTEMGTTGQAVDAIHVTQLERDTVLVCLDKNLKIVNLMGRLKSNKKLASELSFDFAIGSVVCLQDSVLAFWKHGMQGKSFKSNEITQEISDPSRVFRLLGSDRVVVLESRPTDNPTALSNLYILAGHENSY
SIO_010081: map4k5
subclass of: SO_0000673
so part of: map4k5
location: complement(join(3668013..3668100,3669749..3669804,3682839..3682909,3683400..3683492,3685791..3685859,3688450..3688627,3695885..3695988,3708653..3708711,3709615..3709729,3718170..3718230,3720331..3720410,3720973..3721057,3721862..3721903,3724043..3724134,3727064..3727139,3728650..3728784,3731727..3731769,3731946..3731990,3740630..3740697,3742355..3742413,3746231..3746309,3750308..3750424,3751484..3751565,3751654..3751716,3752452..3752583,3755776..3755848,3755955..3755997,3757919..3757936))
location: region:3668013-3757936:-1
so has part: feature:3757919-3757936:-1:exon
so has part: feature:3755955-3755997:-1:exon
so has part: feature:3755776-3755848:-1:exon
so has part: feature:3752452-3752583:-1:exon
so has part: feature:3751654-3751716:-1:exon
so has part: feature:3751484-3751565:-1:exon
so has part: feature:3750308-3750424:-1:exon
so has part: feature:3746231-3746309:-1:exon
so has part: feature:3742355-3742413:-1:exon
so has part: feature:3740630-3740697:-1:exon
so has part: feature:3731946-3731990:-1:exon
so has part: feature:3731727-3731769:-1:exon
so has part: feature:3728650-3728784:-1:exon
so has part: feature:3727064-3727139:-1:exon
so has part: feature:3724043-3724134:-1:exon
so has part: feature:3721862-3721903:-1:exon
so has part: feature:3720973-3721057:-1:exon
so has part: feature:3720331-3720410:-1:exon
so has part: feature:3718170-3718230:-1:exon
so has part: feature:3709615-3709729:-1:exon
so has part: feature:3708653-3708711:-1:exon
so has part: feature:3695885-3695988:-1:exon
so has part: feature:3688450-3688627:-1:exon
so has part: feature:3685791-3685859:-1:exon
so has part: feature:3683400-3683492:-1:exon
so has part: feature:3682839-3682909:-1:exon
so has part: feature:3669749-3669804:-1:exon
so has part: feature:3668013-3668100:-1:exon

XP_038865139.1
type: Protein
SIO_000068: ncbiprotein

position:3757936:-1
position: 3757936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3757919-3757936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3755955-3755997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3755776-3755848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3752452-3752583:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3751654-3751716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3751484-3751565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3750308-3750424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3746231-3746309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3742355-3742413:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3740630-3740697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3731946-3731990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3731727-3731769:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3728650-3728784:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3727064-3727139:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3724043-3724134:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3721862-3721903:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720973-3721057:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3720331-3720410:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3718170-3718230:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3709615-3709729:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3708653-3708711:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3695885-3695988:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3688450-3688627:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3685791-3685859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3683400-3683492:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3682839-3682909:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3669749-3669804:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3668013-3668100:-1:exon

atl1
type: Gene
subclass of: SO_0000704
RO_0002162: 8040
gene: atl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3787217..3814972
location: region:3787217-3814972:1
so has part: feature:3787217-3814972:1:exon
subclass of: SO_0000010

120059731
type: Gene
SIO_000068: ncbigene

position:3787217:1
position: 3787217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3814972:1
position: 3814972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3787217-3814972:1:exon

atl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8040
gene: atl1
product: atlastin GTPase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_039008786.1
SIO_010081: atl1
subclass of: SO_0000673
so part of: atl1
location: join(3787217..3787250,3793257..3793507,3794347..3794481,3796614..3796718,3796952..3797002,3797180..3797236,3798879..3798971,3799779..3799917,3800198..3800325,3802688..3802744,3807738..3807809,3808881..3809033,3810377..3810655,3814523..3814537,3814847..3814972)
location: region:3787217-3814972:1
so has part: feature:3787217-3787250:1:exon
so has part: feature:3793257-3793507:1:exon
so has part: feature:3794347-3794481:1:exon
so has part: feature:3796614-3796718:1:exon
so has part: feature:3796952-3797002:1:exon
so has part: feature:3797180-3797236:1:exon
so has part: feature:3798879-3798971:1:exon
so has part: feature:3799779-3799917:1:exon
so has part: feature:3800198-3800325:1:exon
so has part: feature:3802688-3802744:1:exon
so has part: feature:3807738-3807809:1:exon
so has part: feature:3808881-3809033:1:exon
so has part: feature:3810377-3810655:1:exon
so has part: feature:3814523-3814537:1:exon
so has part: feature:3814847-3814972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3787217-3787250:1:exon

position:3787250:1
position: 3787250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3793257-3793507:1:exon