Oncorhynchus mykiss mitochondrion, complete genome.
type: Entry
definition: Oncorhynchus mykiss mitochondrion, complete genome.
sequence version: NC_001717.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_001717.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Oncorhynchus mykiss (rainbow trout)
organism: Oncorhynchus mykiss
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.
reference: 1
references: 8587139
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from L29771.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16642
topology: circular
so has quality: SO_0000988
location: 1..16642
location: region:1-16642:1
RO_0002162: 8022

NC_001717
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete nucleotide sequence of the mitochondrial DNA genome of the rainbow trout, Oncorhynchus mykiss
author: Zardoya, R.
author: Garrido-Pertierra, A.
author: Bautista, J.M.
journal: J. Mol. Evol.
volume: 41
issue: 6
pages: 942-951
year: 1995
pubmed: 8587139

8587139
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (08-SEP-1999) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Zardoya, R.
journal: Submitted (21-MAR-1994) Rafael Zardoya, Departamento de Bioquimica y Biologia Molecular IV, Facultad de Veterinaria, Universidad Complutense, Madrid, 28040, Spain

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16642:1
position: 16642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16642:1:source
so part of: sequence
organism: Oncorhynchus mykiss
organelle: mitochondrion
mol type: genomic DNA
cell type: hepatocyte
tissue type: liver
dev stage: adult

8022
type: Taxonomy
SIO_000068: taxonomy

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 8022
note: control region
so part of: sequence
location: 1..1003
location: region:1-1003:1
so has part: feature:1-1003:1:region

position:1003:1
position: 1003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1003:1:region

KEF44_t01
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t01
so part of: sequence
location: 1004..1071
location: region:1004-1071:1
so has part: feature:1004-1071:1:exon
subclass of: SO_0000663

64985121
type: Gene
SIO_000068: ncbigene

position:1004:1
position: 1004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071:1
position: 1071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004-1071:1:exon

KEF44_t01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t01
product: tRNA-Phe
note: putative
SIO_010081: KEF44_t01
subclass of: SO_0000673
so part of: KEF44_t01
location: 1004..1071
location: region:1004-1071:1
so has part: feature:1004-1071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004-1071:1:exon

KEF44_r02
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_r02
so part of: sequence
location: 1072..2015
location: region:1072-2015:1
so has part: feature:1072-2015:1:exon
subclass of: SO_0000573

64985107
type: Gene
SIO_000068: ncbigene

position:1072:1
position: 1072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2015:1
position: 2015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072-2015:1:exon

KEF44_r02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8022
locus tag: KEF44_r02
product: 12S ribosomal RNA
note: putative
SIO_010081: KEF44_r02
subclass of: SO_0000673
so part of: KEF44_r02
location: 1072..2015
location: region:1072-2015:1
so has part: feature:1072-2015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072-2015:1:exon

KEF44_t02
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t02
so part of: sequence
location: 2016..2087
location: region:2016-2087:1
so has part: feature:2016-2087:1:exon
subclass of: SO_0000663

64985108
type: Gene
SIO_000068: ncbigene

position:2016:1
position: 2016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087:1
position: 2087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016-2087:1:exon

KEF44_t02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t02
product: tRNA-Val
note: putative
SIO_010081: KEF44_t02
subclass of: SO_0000673
so part of: KEF44_t02
location: 2016..2087
location: region:2016-2087:1
so has part: feature:2016-2087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2016-2087:1:exon

KEF44_r01
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_r01
so part of: sequence
location: 2088..3767
location: region:2088-3767:1
so has part: feature:2088-3767:1:exon
subclass of: SO_0000573

64985109
type: Gene
SIO_000068: ncbigene

position:2088:1
position: 2088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767:1
position: 3767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2088-3767:1:exon

KEF44_r01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 8022
locus tag: KEF44_r01
product: 16S ribosomal RNA
note: putative
SIO_010081: KEF44_r01
subclass of: SO_0000673
so part of: KEF44_r01
location: 2088..3767
location: region:2088-3767:1
so has part: feature:2088-3767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2088-3767:1:exon

KEF44_t03
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t03
so part of: sequence
location: 3768..3843
location: region:3768-3843:1
so has part: feature:3768-3843:1:exon
subclass of: SO_0000663

64985110
type: Gene
SIO_000068: ncbigene

position:3768:1
position: 3768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3843:1
position: 3843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3768-3843:1:exon

KEF44_t03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t03
product: tRNA-Leu
note: putative
codon recognized: UUR
SIO_010081: KEF44_t03
subclass of: SO_0000673
so part of: KEF44_t03
location: 3768..3843
location: region:3768-3843:1
so has part: feature:3768-3843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3768-3843:1:exon

KEF44_p13
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: NADH-1
gene: ND1
locus tag: KEF44_p13
gene synonym: NADH-1
so part of: sequence
location: 3844..4815
location: region:3844-4815:1
so has part: feature:3844-4815:1:exon
subclass of: SO_0000010

807982
type: Gene
SIO_000068: ncbigene

position:3844:1
position: 3844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4815:1
position: 4815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3844-4815:1:exon

KEF44_p13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: NADH-1
gene: ND1
locus tag: KEF44_p13
gene synonym: NADH-1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MITLITHVINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKETVRPSTSSPFLFLATPMLALTLALTLWAPMPIPYPVTDLNLGVLFVLALSSLAVYSILGSGWASNSKYALIGELRAVAQTISYEVSLGLILLSVIIITGGFTLQTFNVAQESIWLLVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLFLGASHIPAFPELTALNLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKSFLPLTLALVLWHLALPIALAGLPPQL
SIO_010081: KEF44_p13
subclass of: SO_0000673
so part of: KEF44_p13
location: 3844..4815
location: region:3844-4815:1
so has part: feature:3844-4815:1:exon

NP_008290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3844-4815:1:exon

KEF44_t04
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t04
so part of: sequence
location: 4819..4890
location: region:4819-4890:1
so has part: feature:4819-4890:1:exon
subclass of: SO_0000663

64985098
type: Gene
SIO_000068: ncbigene

position:4819:1
position: 4819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4890:1
position: 4890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4819-4890:1:exon

KEF44_t04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t04
product: tRNA-Ile
note: putative
SIO_010081: KEF44_t04
subclass of: SO_0000673
so part of: KEF44_t04
location: 4819..4890
location: region:4819-4890:1
so has part: feature:4819-4890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4819-4890:1:exon

KEF44_t05
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t05
so part of: sequence
location: complement(4888..4958)
location: region:4888-4958:-1
so has part: feature:4888-4958:-1:exon
subclass of: SO_0000663

64985111
type: Gene
SIO_000068: ncbigene

position:4888:-1
position: 4888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4958:-1
position: 4958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4888-4958:-1:exon

KEF44_t05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t05
product: tRNA-Gln
note: putative
SIO_010081: KEF44_t05
subclass of: SO_0000673
so part of: KEF44_t05
location: complement(4888..4958)
location: region:4888-4958:-1
so has part: feature:4888-4958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4888-4958:-1:exon

KEF44_t06
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t06
so part of: sequence
location: 4958..5026
location: region:4958-5026:1
so has part: feature:4958-5026:1:exon
subclass of: SO_0000663

64985112
type: Gene
SIO_000068: ncbigene

position:4958:1
position: 4958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5026:1
position: 5026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4958-5026:1:exon

KEF44_t06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t06
product: tRNA-Met
note: putative
SIO_010081: KEF44_t06
subclass of: SO_0000673
so part of: KEF44_t06
location: 4958..5026
location: region:4958-5026:1
so has part: feature:4958-5026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4958-5026:1:exon

KEF44_p12
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: NADH-2
gene: ND2
locus tag: KEF44_p12
gene synonym: NADH-2
so part of: sequence
location: 5027..6076
location: region:5027-6076:1
so has part: feature:5027-6076:1:exon
subclass of: SO_0000010

807979
type: Gene
SIO_000068: ncbigene

position:5027:1
position: 5027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6076:1
position: 6076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5027-6076:1:exon

KEF44_p12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: NADH-2
gene: ND2
locus tag: KEF44_p12
gene synonym: NADH-2
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYVLTILLSSLGLGTVLTFASSHWLLAWMGLEINTLAIIPIMAQQHHPRAIEATTKYFLTQATAAAMILFASTTNAWLVGEWEIHQLSHPLATTTVMLALALKLGLAPVHFWLPEVLQGLELTTGLILSTWQKLAPFALMIQVAPTINSSLLVTIGLLSTLVGGWGGLNQTQLRKILAYLPIAHLGWMVLILQFAPSLTLLSLSLYIVMTSSAFLTLKTNNSLTINTLATSWTKSPTLAALTALVLLSLGGLPPLSGFMPKWLILQELTKQGLPLSATLAAMTALLSLYFYLRLCYALTLTIYPNTLTATAPWRLNFTMITLPLSITTIMALGLLPLTPAVTAMLAL
SIO_010081: KEF44_p12
subclass of: SO_0000673
so part of: KEF44_p12
location: 5027..6076
location: region:5027-6076:1
so has part: feature:5027-6076:1:exon

NP_008291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5027-6076:1:exon

KEF44_t07
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t07
so part of: sequence
location: 6079..6147
location: region:6079-6147:1
so has part: feature:6079-6147:1:exon
subclass of: SO_0000663

64985099
type: Gene
SIO_000068: ncbigene

position:6079:1
position: 6079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6147:1
position: 6147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6079-6147:1:exon

KEF44_t07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t07
product: tRNA-Trp
note: putative
SIO_010081: KEF44_t07
subclass of: SO_0000673
so part of: KEF44_t07
location: 6079..6147
location: region:6079-6147:1
so has part: feature:6079-6147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6079-6147:1:exon

KEF44_t08
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t08
so part of: sequence
location: complement(6149..6217)
location: region:6149-6217:-1
so has part: feature:6149-6217:-1:exon
subclass of: SO_0000663

64985113
type: Gene
SIO_000068: ncbigene

position:6149:-1
position: 6149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6217:-1
position: 6217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6149-6217:-1:exon

KEF44_t08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t08
product: tRNA-Ala
note: putative
SIO_010081: KEF44_t08
subclass of: SO_0000673
so part of: KEF44_t08
location: complement(6149..6217)
location: region:6149-6217:-1
so has part: feature:6149-6217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6149-6217:-1:exon

KEF44_t09
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t09
so part of: sequence
location: complement(6219..6291)
location: region:6219-6291:-1
so has part: feature:6219-6291:-1:exon
subclass of: SO_0000663

64985114
type: Gene
SIO_000068: ncbigene

position:6219:-1
position: 6219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6291:-1
position: 6291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6219-6291:-1:exon

KEF44_t09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t09
product: tRNA-Asn
note: putative
SIO_010081: KEF44_t09
subclass of: SO_0000673
so part of: KEF44_t09
location: complement(6219..6291)
location: region:6219-6291:-1
so has part: feature:6219-6291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6219-6291:-1:exon

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 8022
standard name: OriL
note: Origin of L-strand replication; putative
so part of: sequence
location: complement(6292..6328)
location: region:6292-6328:-1
so has part: feature:6292-6328:-1:region

position:6292:-1
position: 6292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6328:-1
position: 6328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6292-6328:-1:region

KEF44_t10
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t10
so part of: sequence
location: complement(6329..6395)
location: region:6329-6395:-1
so has part: feature:6329-6395:-1:exon
subclass of: SO_0000663

64985115
type: Gene
SIO_000068: ncbigene

position:6329:-1
position: 6329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6395:-1
position: 6395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6329-6395:-1:exon

KEF44_t10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t10
product: tRNA-Cys
note: putative
SIO_010081: KEF44_t10
subclass of: SO_0000673
so part of: KEF44_t10
location: complement(6329..6395)
location: region:6329-6395:-1
so has part: feature:6329-6395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6329-6395:-1:exon

KEF44_t11
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t11
so part of: sequence
location: complement(6396..6466)
location: region:6396-6466:-1
so has part: feature:6396-6466:-1:exon
subclass of: SO_0000663

64985116
type: Gene
SIO_000068: ncbigene

position:6396:-1
position: 6396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6466:-1
position: 6466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6396-6466:-1:exon

KEF44_t11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t11
product: tRNA-Tyr
note: putative
SIO_010081: KEF44_t11
subclass of: SO_0000673
so part of: KEF44_t11
location: complement(6396..6466)
location: region:6396-6466:-1
so has part: feature:6396-6466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6396-6466:-1:exon

KEF44_p11
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: COI
gene: COX1
locus tag: KEF44_p11
gene synonym: COI
so part of: sequence
location: 6468..8018
location: region:6468-8018:1
so has part: feature:6468-8018:1:exon
subclass of: SO_0000010

807975
type: Gene
SIO_000068: ncbigene

position:6468:1
position: 6468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8018:1
position: 8018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6468-8018:1:exon

KEF44_p11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: COI
gene: COX1
locus tag: KEF44_p11
gene synonym: COI
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLSSSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFSHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGAFVHWFPLFTGYTLHSTWTKIHFGIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSIGSLVSLVAVIMFLFILWEAFAAKREVASIELTSTNVEWLHGCPPPYHTFEEPAFVQVQAN
SIO_010081: KEF44_p11
subclass of: SO_0000673
so part of: KEF44_p11
location: 6468..8018
location: region:6468-8018:1
so has part: feature:6468-8018:1:exon

NP_008292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6468-8018:1:exon

KEF44_t12
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t12
so part of: sequence
location: complement(8019..8089)
location: region:8019-8089:-1
so has part: feature:8019-8089:-1:exon
subclass of: SO_0000663

64985100
type: Gene
SIO_000068: ncbigene

position:8019:-1
position: 8019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8089:-1
position: 8089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8019-8089:-1:exon

KEF44_t12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t12
product: tRNA-Ser
note: putative
codon recognized: UCN
SIO_010081: KEF44_t12
subclass of: SO_0000673
so part of: KEF44_t12
location: complement(8019..8089)
location: region:8019-8089:-1
so has part: feature:8019-8089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8019-8089:-1:exon

KEF44_t13
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t13
so part of: sequence
location: 8094..8166
location: region:8094-8166:1
so has part: feature:8094-8166:1:exon
subclass of: SO_0000663

64985117
type: Gene
SIO_000068: ncbigene

position:8094:1
position: 8094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8166:1
position: 8166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8094-8166:1:exon

KEF44_t13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t13
product: tRNA-Asp
note: putative
SIO_010081: KEF44_t13
subclass of: SO_0000673
so part of: KEF44_t13
location: 8094..8166
location: region:8094-8166:1
so has part: feature:8094-8166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8094-8166:1:exon

KEF44_p10
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: COII
gene: COX2
locus tag: KEF44_p10
gene synonym: COII
so part of: sequence
location: 8181..8871
location: region:8181-8871:1
so has part: feature:8181-8871:1:exon
subclass of: SO_0000010

807980
type: Gene
SIO_000068: ncbigene

position:8181:1
position: 8181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8871:1
position: 8871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8181-8871:1:exon

KEF44_p10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: COII
gene: COX2
locus tag: KEF44_p10
gene synonym: COII
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8871,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAASPVMEELLHFHDHALMIVLLISTLVLYIIVAMVSTKLTNMYILDSQEIEIVWTVLPAVILILIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYEDLGFDSYMVPTQDLVPGQFRLLETDHRMVVPVESPIRVLVSAEDVLHSWAVPSLGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFEKWSTMMLEDA
SIO_010081: KEF44_p10
subclass of: SO_0000673
so part of: KEF44_p10
location: 8181..8871
location: region:8181-8871:1
so has part: feature:8181-8871:1:exon

NP_008293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8181-8871:1:exon

KEF44_t14
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t14
so part of: sequence
location: 8872..8945
location: region:8872-8945:1
so has part: feature:8872-8945:1:exon
subclass of: SO_0000663

64985101
type: Gene
SIO_000068: ncbigene

position:8872:1
position: 8872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8945:1
position: 8945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8872-8945:1:exon

KEF44_t14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t14
product: tRNA-Lys
note: putative
SIO_010081: KEF44_t14
subclass of: SO_0000673
so part of: KEF44_t14
location: 8872..8945
location: region:8872-8945:1
so has part: feature:8872-8945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8872-8945:1:exon

KEF44_p09
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: ATPase8
gene: ATP8
locus tag: KEF44_p09
gene synonym: ATPase8
so part of: sequence
location: 8947..9114
location: region:8947-9114:1
so has part: feature:8947-9114:1:exon
subclass of: SO_0000010

807971
type: Gene
SIO_000068: ncbigene

position:8947:1
position: 8947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9114:1
position: 9114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8947-9114:1:exon

KEF44_p09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: ATPase8
gene: ATP8
locus tag: KEF44_p09
gene synonym: ATPase8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPAPWFAILVFSWLVFLTVIPPKVLGHTFTNEPTSQSTEKAKPEPWNWPWH
SIO_010081: KEF44_p09
subclass of: SO_0000673
so part of: KEF44_p09
location: 8947..9114
location: region:8947-9114:1
so has part: feature:8947-9114:1:exon

NP_008294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8947-9114:1:exon

KEF44_p08
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: ATPase6
gene: ATP6
locus tag: KEF44_p08
gene synonym: ATPase6
so part of: sequence
location: 9105..9776
location: region:9105-9776:1
so has part: feature:9105-9776:1:exon
subclass of: SO_0000010

807976
type: Gene
SIO_000068: ncbigene

position:9105:1
position: 9105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9776:1
position: 9776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9105-9776:1:exon

KEF44_p08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: ATPase6
gene: ATP6
locus tag: KEF44_p08
gene synonym: ATPase6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MTLSFFDQFMSPTYLGIPLIAVALTLPWILFPTPSARWLNNRLITLQGWFINRFTQQLLLPLNLGGHKWAALLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTAALGHLLPEGTPVPLIPVLIIIETISLFIRPALGVRLTANLTAGHQLIATAAFVLLPMMPTVAILTSIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV
SIO_010081: KEF44_p08
subclass of: SO_0000673
so part of: KEF44_p08
location: 9105..9776
location: region:9105-9776:1
so has part: feature:9105-9776:1:exon

NP_008295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9105-9776:1:exon

KEF44_p07
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: COIII
gene: COX3
locus tag: KEF44_p07
gene synonym: COIII
so part of: sequence
location: 9776..10561
location: region:9776-10561:1
so has part: feature:9776-10561:1:exon
subclass of: SO_0000010

807973
type: Gene
SIO_000068: ncbigene

position:10561:1
position: 10561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9776-10561:1:exon

KEF44_p07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: COIII
gene: COX3
locus tag: KEF44_p07
gene synonym: COIII
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAIAALLLTSGTAVWFHFHSLTLLTLGNILLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPAGITTLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQTIQALTLTILLGFYFTFLQGMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQVQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: KEF44_p07
subclass of: SO_0000673
so part of: KEF44_p07
location: 9776..10561
location: region:9776-10561:1
so has part: feature:9776-10561:1:exon

NP_008296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9776-10561:1:exon

KEF44_t15
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t15
so part of: sequence
location: 10561..10630
location: region:10561-10630:1
so has part: feature:10561-10630:1:exon
subclass of: SO_0000663

64985102
type: Gene
SIO_000068: ncbigene

position:10630:1
position: 10630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10561-10630:1:exon

KEF44_t15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t15
product: tRNA-Gly
note: putative
SIO_010081: KEF44_t15
subclass of: SO_0000673
so part of: KEF44_t15
location: 10561..10630
location: region:10561-10630:1
so has part: feature:10561-10630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10561-10630:1:exon

KEF44_p06
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: NADH-3
gene: ND3
locus tag: KEF44_p06
gene synonym: NADH-3
so part of: sequence
location: 10631..10979
location: region:10631-10979:1
so has part: feature:10631-10979:1:exon
subclass of: SO_0000010

807972
type: Gene
SIO_000068: ncbigene

position:10631:1
position: 10631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10979:1
position: 10979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10631-10979:1:exon

KEF44_p06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: NADH-3
gene: ND3
locus tag: KEF44_p06
gene synonym: NADH-3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10979,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLITTIITITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLHTPTLTLIWSTAVLALLTLGLIYEWTQGGLEWAE
SIO_010081: KEF44_p06
subclass of: SO_0000673
so part of: KEF44_p06
location: 10631..10979
location: region:10631-10979:1
so has part: feature:10631-10979:1:exon

NP_008297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10631-10979:1:exon

KEF44_t16
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t16
so part of: sequence
location: 10981..11049
location: region:10981-11049:1
so has part: feature:10981-11049:1:exon
subclass of: SO_0000663

64985103
type: Gene
SIO_000068: ncbigene

position:10981:1
position: 10981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11049:1
position: 11049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10981-11049:1:exon

KEF44_t16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t16
product: tRNA-Arg
note: putative
SIO_010081: KEF44_t16
subclass of: SO_0000673
so part of: KEF44_t16
location: 10981..11049
location: region:10981-11049:1
so has part: feature:10981-11049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10981-11049:1:exon

KEF44_p05
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: NADH-4L
gene: ND4L
locus tag: KEF44_p05
gene synonym: NADH-4L
so part of: sequence
location: 11050..11346
location: region:11050-11346:1
so has part: feature:11050-11346:1:exon
subclass of: SO_0000010

807974
type: Gene
SIO_000068: ncbigene

position:11050:1
position: 11050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11346:1
position: 11346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11050-11346:1:exon

KEF44_p05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: NADH-4L
gene: ND4L
locus tag: KEF44_p05
gene synonym: NADH-4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFSFTSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQMEATGYSVAPMLLLAFSACEASAGLALLVATARTHGTDRLQSLNLLQC
SIO_010081: KEF44_p05
subclass of: SO_0000673
so part of: KEF44_p05
location: 11050..11346
location: region:11050-11346:1
so has part: feature:11050-11346:1:exon

NP_008298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11050-11346:1:exon

KEF44_p04
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: NADH-4
gene: ND4
locus tag: KEF44_p04
gene synonym: NADH-4
so part of: sequence
location: 11340..12720
location: region:11340-12720:1
so has part: feature:11340-12720:1:exon
subclass of: SO_0000010

807978
type: Gene
SIO_000068: ncbigene

position:11340:1
position: 11340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12720:1
position: 12720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11340-12720:1:exon

KEF44_p04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: NADH-4
gene: ND4
locus tag: KEF44_p04
gene synonym: NADH-4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:12720,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILASQSHLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYVMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDNGTLSMFTLQYTQPLHLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVMLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFTGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFVASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIILHLIPIVLLILKPELMWGWCF
SIO_010081: KEF44_p04
subclass of: SO_0000673
so part of: KEF44_p04
location: 11340..12720
location: region:11340-12720:1
so has part: feature:11340-12720:1:exon

NP_008299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11340-12720:1:exon

KEF44_t17
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t17
so part of: sequence
location: 12721..12789
location: region:12721-12789:1
so has part: feature:12721-12789:1:exon
subclass of: SO_0000663

64985104
type: Gene
SIO_000068: ncbigene

position:12721:1
position: 12721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12789:1
position: 12789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12721-12789:1:exon

KEF44_t17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t17
product: tRNA-His
note: putative
SIO_010081: KEF44_t17
subclass of: SO_0000673
so part of: KEF44_t17
location: 12721..12789
location: region:12721-12789:1
so has part: feature:12721-12789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12721-12789:1:exon

KEF44_t18
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t18
so part of: sequence
location: 12790..12858
location: region:12790-12858:1
so has part: feature:12790-12858:1:exon
subclass of: SO_0000663

64985118
type: Gene
SIO_000068: ncbigene

position:12790:1
position: 12790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12858:1
position: 12858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12790-12858:1:exon

KEF44_t18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t18
product: tRNA-Ser
note: putative
codon recognized: AGY
SIO_010081: KEF44_t18
subclass of: SO_0000673
so part of: KEF44_t18
location: 12790..12858
location: region:12790-12858:1
so has part: feature:12790-12858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12790-12858:1:exon

KEF44_t19
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t19
so part of: sequence
location: 12860..12931
location: region:12860-12931:1
so has part: feature:12860-12931:1:exon
subclass of: SO_0000663

64985119
type: Gene
SIO_000068: ncbigene

position:12860:1
position: 12860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12931:1
position: 12931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12860-12931:1:exon

KEF44_t19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t19
product: tRNA-Leu
note: putative
codon recognized: CUN
SIO_010081: KEF44_t19
subclass of: SO_0000673
so part of: KEF44_t19
location: 12860..12931
location: region:12860-12931:1
so has part: feature:12860-12931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12860-12931:1:exon

KEF44_p03
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: NADH-5
gene: ND5
locus tag: KEF44_p03
gene synonym: NADH-5
so part of: sequence
location: 12932..14770
location: region:12932-14770:1
so has part: feature:12932-14770:1:exon
subclass of: SO_0000010

807977
type: Gene
SIO_000068: ncbigene

position:12932:1
position: 12932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14770:1
position: 14770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12932-14770:1:exon

KEF44_p03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: NADH-5
gene: ND5
locus tag: KEF44_p03
gene synonym: NADH-5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MHPTTLILSSSLLMIFTLLIYPLITTLTPTPQHKNWALTHVKTAIKMAFLVSLLPLFVFLDQGTETIVTNWQWMNTTTFDINLSFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLLFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRADANTAAMQAVIYNRVGDIGLILSMAWFATNLNSWEIQQMFASSKGLDLTLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMEDNQTALTVCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGMHNLTPSTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLLATSFTAIYSLRVIFFVSMGHPRFTATAPVNENNPSVINPIKRLAWGSIIAGLLITSNFLPTNTPVMTMPTHLKLAALLVTISGLLIALELASLTNKQFKLHPTLTLHNFSNMLGFFPAIIHRLTPKLNLTLGQTIASQMVDHTWFEKVGPKELFQLTCLMVTTTSNIQQGMIKTYLTLFFLSTTLAVLLTLT
SIO_010081: KEF44_p03
subclass of: SO_0000673
so part of: KEF44_p03
location: 12932..14770
location: region:12932-14770:1
so has part: feature:12932-14770:1:exon

NP_008300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12932-14770:1:exon

KEF44_p02
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: NADH-6
gene: ND6
locus tag: KEF44_p02
gene synonym: NADH-6
so part of: sequence
location: complement(14767..15288)
location: region:14767-15288:-1
so has part: feature:14767-15288:-1:exon
subclass of: SO_0000010

807970
type: Gene
SIO_000068: ncbigene

position:14767:-1
position: 14767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15288:-1
position: 15288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14767-15288:-1:exon

KEF44_p02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: NADH-6
gene: ND6
locus tag: KEF44_p02
gene synonym: NADH-6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYLVSLFLLGLVLGLVAVASNPAPYFAALGLVVAAGVGCGVLVGHGGSFLSLVLFLIYLGGMLVVFAYSAALAAEPFPESWGDRSVLGYVVVYTVGVVLVAGLFWGGWYETSWVAVDEFKEFSVLRGDTSGVALMYSHGGGMLIACAWVLLLTLFVVLELTRGLSRGALRAV
SIO_010081: KEF44_p02
subclass of: SO_0000673
so part of: KEF44_p02
location: complement(14767..15288)
location: region:14767-15288:-1
so has part: feature:14767-15288:-1:exon

NP_008301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14767-15288:-1:exon

KEF44_t20
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t20
so part of: sequence
location: complement(15289..15357)
location: region:15289-15357:-1
so has part: feature:15289-15357:-1:exon
subclass of: SO_0000663

64985105
type: Gene
SIO_000068: ncbigene

position:15289:-1
position: 15289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15357:-1
position: 15357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15289-15357:-1:exon

KEF44_t20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t20
product: tRNA-Glu
note: putative
SIO_010081: KEF44_t20
subclass of: SO_0000673
so part of: KEF44_t20
location: complement(15289..15357)
location: region:15289-15357:-1
so has part: feature:15289-15357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15289-15357:-1:exon

KEF44_p01
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
alternative label: Cyt b
gene: CYTB
locus tag: KEF44_p01
gene synonym: Cyt b
so part of: sequence
location: 15361..16501
location: region:15361-16501:1
so has part: feature:15361-16501:1:exon
subclass of: SO_0000010

807981
type: Gene
SIO_000068: ncbigene

position:15361:1
position: 15361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16501:1
position: 16501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15361-16501:1:exon

KEF44_p01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8022
alternative label: Cyt b
gene: CYTB
locus tag: KEF44_p01
gene synonym: Cyt b
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:16501,aa:TERM)
transl table: 2
product: cytochrome b
translation: MANLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLATQILTGLFLAMHYTSDISTAFSSVCHICRDVSYGWLIRNIHANGASFFFICIYMHIARGLYYGSYLYKETWNIGVVLLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGGALVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATVLHLLFLHETGSNNPAGINSDADKISFHPYFSYKDLLGFVAMLLGLTSLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWALVADMLILTWIGGMPVEHPFIIIGQVASVIYFTIFLVLSPLAGWAEIKALQWA
SIO_010081: KEF44_p01
subclass of: SO_0000673
so part of: KEF44_p01
location: 15361..16501
location: region:15361-16501:1
so has part: feature:15361-16501:1:exon

NP_008302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15361-16501:1:exon

KEF44_t21
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t21
so part of: sequence
location: 16502..16573
location: region:16502-16573:1
so has part: feature:16502-16573:1:exon
subclass of: SO_0000663

64985106
type: Gene
SIO_000068: ncbigene

position:16502:1
position: 16502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16573:1
position: 16573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16502-16573:1:exon

KEF44_t21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t21
product: tRNA-Thr
note: putative
SIO_010081: KEF44_t21
subclass of: SO_0000673
so part of: KEF44_t21
location: 16502..16573
location: region:16502-16573:1
so has part: feature:16502-16573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16502-16573:1:exon

KEF44_t22
type: Gene
subclass of: SO_0000704
RO_0002162: 8022
locus tag: KEF44_t22
so part of: sequence
location: complement(16573..16642)
location: region:16573-16642:-1
so has part: feature:16573-16642:-1:exon
subclass of: SO_0000663

64985120
type: Gene
SIO_000068: ncbigene

position:16573:-1
position: 16573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16642:-1
position: 16642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16573-16642:-1:exon

KEF44_t22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8022
locus tag: KEF44_t22
product: tRNA-Pro
note: putative
SIO_010081: KEF44_t22
subclass of: SO_0000673
so part of: KEF44_t22
location: complement(16573..16642)
location: region:16573-16642:-1
so has part: feature:16573-16642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16573-16642:-1:exon