Electrophorus electricus isolate fEleEle1 chromosome 26, fEleEle1.pri, whole genome shotgun sequence.
type: Entry
definition: Electrophorus electricus isolate fEleEle1 chromosome 26, fEleEle1.pri, whole genome shotgun sequence.
sequence version: NC_049560.1
sequence date: 2020-07-16
sequence: sequence
division: CON
label: NC_049560.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA645070
dblink: SAMN12623625
keyword: WGS
keyword: RefSeq
source: Electrophorus electricus (electric eel)
organism: Electrophorus electricus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM023705.1.\nAssembly name: fEleEle1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/06/23. The original whole-genome shotgun project has the\naccession JABVME000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 17-MAR-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 7.0.1.66975; purge_dups v. v1;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.4; Salsa HiC v. 2.2; Arrow smrtanalysis\n Pacbio polishing & gap filling v.\n SMRTLink7.0.1; longranger align v. 2.2.2;\n freebayes Illumina polishing v. 1.3.1;\n gEVAL manual curation v. 2020-03-17; VGP\n assembly pipeline individual v. 1.6\nAssembly Name :: fEleEle1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 52.97x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Electrophorus electricus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 10945573
topology: linear
so has quality: SO_0000987
location: 1..10945573
location: region:1-10945573:1
RO_0002162: 8005

NC_049560
type: RefSeq
SIO_000068: refseq

PRJNA645070
type: BioProject
SIO_000068: bioproject

SAMN12623625
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10945573:1
position: 10945573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10945573:1:source
so part of: sequence
organism: Electrophorus electricus
mol type: genomic DNA
isolate: fEleEle1
chromosome: 26
tissue type: liver
dev stage: juvenile
country: Netherlands: Dejong Marinelife, Rotterdam
lat lon: 51.9244201 N 4.4777325 E
collection date: 29-Nov-2018
collected by: Nidal Karagic

8005
type: Taxonomy
SIO_000068: taxonomy

LOC118240844
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20117..27001)
location: region:20117-27001:-1
so has part: feature:20117-27001:-1:exon
subclass of: SO_0000011

118240844
type: Gene
SIO_000068: ncbigene

position:20117:-1
position: 20117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27001:-1
position: 27001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20117-27001:-1:exon

LOC118240844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240844
product: uncharacterized LOC118240844, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004775685.1
SIO_010081: LOC118240844
subclass of: SO_0000673
so part of: LOC118240844
location: complement(join(20117..20158,21031..21149,21709..21954,26418..27001))
location: region:20117-27001:-1
so has part: feature:26418-27001:-1:exon
so has part: feature:21709-21954:-1:exon
so has part: feature:21031-21149:-1:exon
so has part: feature:20117-20158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26418-27001:-1:exon

position:26418:-1
position: 26418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21709-21954:-1:exon

position:21709:-1
position: 21709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21954:-1
position: 21954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21031-21149:-1:exon

position:21031:-1
position: 21031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21149:-1
position: 21149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20117-20158:-1:exon

position:20158:-1
position: 20158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240844
product: uncharacterized LOC118240844, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004775684.1
SIO_010081: LOC118240844
subclass of: SO_0000673
so part of: LOC118240844
location: complement(join(20204..21149,21709..21954,26379..27000))
location: region:20204-27000:-1
so has part: feature:26379-27000:-1:exon
so has part: feature:21709-21954:-1:exon
so has part: feature:20204-21149:-1:exon

position:20204:-1
position: 20204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27000:-1
position: 27000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26379-27000:-1:exon

position:26379:-1
position: 26379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21709-21954:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20204-21149:-1:exon

LOC118240844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240844
product: uncharacterized LOC118240844, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004775683.1
SIO_010081: LOC118240844
subclass of: SO_0000673
so part of: LOC118240844
location: complement(join(20204..21149,21709..21954,26418..26996))
location: region:20204-26996:-1
so has part: feature:26418-26996:-1:exon
so has part: feature:21709-21954:-1:exon
so has part: feature:20204-21149:-1:exon

position:26996:-1
position: 26996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26418-26996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21709-21954:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20204-21149:-1:exon

ttc39c
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: ttc39c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(30613..42797)
location: region:30613-42797:-1
so has part: feature:30613-42797:-1:exon
subclass of: SO_0000010

113574472
type: Gene
SIO_000068: ncbigene

position:30613:-1
position: 30613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42797:-1
position: 42797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30613-42797:-1:exon

ttc39c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ttc39c
product: tetratricopeptide repeat domain 39C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027005420.2
SIO_010081: ttc39c
subclass of: SO_0000673
so part of: ttc39c
location: complement(join(30613..33062,33350..33388,33950..34054,34348..34445,34617..34740,34842..34951,36116..36223,36547..36640,37151..37319,38467..38836,39118..39232,39404..39532,41276..41324,42101..42797))
location: region:30613-42797:-1
so has part: feature:42101-42797:-1:exon
so has part: feature:41276-41324:-1:exon
so has part: feature:39404-39532:-1:exon
so has part: feature:39118-39232:-1:exon
so has part: feature:38467-38836:-1:exon
so has part: feature:37151-37319:-1:exon
so has part: feature:36547-36640:-1:exon
so has part: feature:36116-36223:-1:exon
so has part: feature:34842-34951:-1:exon
so has part: feature:34617-34740:-1:exon
so has part: feature:34348-34445:-1:exon
so has part: feature:33950-34054:-1:exon
so has part: feature:33350-33388:-1:exon
so has part: feature:30613-33062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42101-42797:-1:exon

position:42101:-1
position: 42101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41276-41324:-1:exon

position:41276:-1
position: 41276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41324:-1
position: 41324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39404-39532:-1:exon

position:39404:-1
position: 39404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39532:-1
position: 39532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39118-39232:-1:exon

position:39118:-1
position: 39118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39232:-1
position: 39232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38467-38836:-1:exon

position:38467:-1
position: 38467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38836:-1
position: 38836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37151-37319:-1:exon

position:37151:-1
position: 37151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37319:-1
position: 37319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:36547-36640:-1:exon

position:36547:-1
position: 36547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36640:-1
position: 36640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:36116-36223:-1:exon

position:36116:-1
position: 36116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36223:-1
position: 36223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:34842-34951:-1:exon

position:34842:-1
position: 34842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34951:-1
position: 34951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:34617-34740:-1:exon

position:34617:-1
position: 34617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34740:-1
position: 34740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:34348-34445:-1:exon

position:34348:-1
position: 34348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34445:-1
position: 34445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:33950-34054:-1:exon

position:33950:-1
position: 33950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34054:-1
position: 34054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:33350-33388:-1:exon

position:33350:-1
position: 33350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33388:-1
position: 33388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:30613-33062:-1:exon

position:33062:-1
position: 33062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ttc39c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ttc39c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39C
translation: MAGPEEHSQQHRRVEEKAERLDDAELAFQGINMLLNNGFKESDELFRRYRTQSPLMSFGASFVSFLNAMMTFEEEKMQMACDDLRATEKLCESDNAGVIETIRNKIKKSMDTQKSGMTVVDQLQRQIIVADCQVYLAVLSFVKQELSAYIKGGWILRKAWKMYNKCYSDISQLQEACRRRSSSQQGALASDQANHNTPVAESSGGVTEEALGRLKGSVSFGYGLFHLCISMVPPHLLKIVNLLGFPGDRHQGLASLAYASESKDMKAPLATLALLWYHTVVQPFFALDGSDSRAGLLEAKAILQKKAMTYPNSSLFIFFRGRVQRLECQINSALASFHDALEFASDQREIQHVCLYEIGWCSMIEMNFEDAYKAFERLKNESRWSQCYYAYLTGVCQGASGDLEGAKAIFRDAQRLFKRKNNQIEQFAFRRAERLRKLSPTQELCILGAVEVLYLWKALPNCSSSKLQLMSQVLQGLDDPCCQGLKHLLLGAIKKCLGNIKDAIQCYQMAARDELGRQNNSYVQPYSYYELGCVLLANPETLSKGRSLLLQAKENYAGYDFENRLHVRIHSALASIREVVPQ
SIO_010081: ttc39c
subclass of: SO_0000673
so part of: ttc39c
location: complement(join(32973..33062,33350..33388,33950..34054,34348..34445,34617..34740,34842..34951,36116..36223,36547..36640,37151..37319,38467..38836,39118..39232,39404..39532,41276..41324,42101..42249))
location: region:32973-42249:-1
so has part: feature:42101-42249:-1:exon
so has part: feature:41276-41324:-1:exon
so has part: feature:39404-39532:-1:exon
so has part: feature:39118-39232:-1:exon
so has part: feature:38467-38836:-1:exon
so has part: feature:37151-37319:-1:exon
so has part: feature:36547-36640:-1:exon
so has part: feature:36116-36223:-1:exon
so has part: feature:34842-34951:-1:exon
so has part: feature:34617-34740:-1:exon
so has part: feature:34348-34445:-1:exon
so has part: feature:33950-34054:-1:exon
so has part: feature:33350-33388:-1:exon
so has part: feature:32973-33062:-1:exon

XP_026861221.1
type: Protein
SIO_000068: ncbiprotein

position:32973:-1
position: 32973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42249:-1
position: 42249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42101-42249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41276-41324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39404-39532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39118-39232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38467-38836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37151-37319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36547-36640:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:36116-36223:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34842-34951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34617-34740:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:34348-34445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:33950-34054:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:33350-33388:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:32973-33062:-1:exon

cts12
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: cts12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60242..68434)
location: region:60242-68434:-1
so has part: feature:60242-68434:-1:exon
subclass of: SO_0000010

113574513
type: Gene
SIO_000068: ncbigene

position:60242:-1
position: 60242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68434:-1
position: 68434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60242-68434:-1:exon

cts12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: cts12
product: cathepsin 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 118 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027005494.2
SIO_010081: cts12
subclass of: SO_0000673
so part of: cts12
location: complement(join(60242..60369,60775..60880,61096..61264,61482..61703,61919..62083,64272..64394,64685..64842,67871..68434))
location: region:60242-68434:-1
so has part: feature:67871-68434:-1:exon
so has part: feature:64685-64842:-1:exon
so has part: feature:64272-64394:-1:exon
so has part: feature:61919-62083:-1:exon
so has part: feature:61482-61703:-1:exon
so has part: feature:61096-61264:-1:exon
so has part: feature:60775-60880:-1:exon
so has part: feature:60242-60369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67871-68434:-1:exon

position:67871:-1
position: 67871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64685-64842:-1:exon

position:64685:-1
position: 64685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64842:-1
position: 64842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64272-64394:-1:exon

position:64272:-1
position: 64272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64394:-1
position: 64394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61919-62083:-1:exon

position:61919:-1
position: 61919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62083:-1
position: 62083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:61482-61703:-1:exon

position:61482:-1
position: 61482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61703:-1
position: 61703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:61096-61264:-1:exon

position:61096:-1
position: 61096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61264:-1
position: 61264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:60775-60880:-1:exon

position:60775:-1
position: 60775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60880:-1
position: 60880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:60242-60369:-1:exon

position:60369:-1
position: 60369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cts12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: cts12
product: cathepsin 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 118 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027005492.2
SIO_010081: cts12
subclass of: SO_0000673
so part of: cts12
location: complement(join(60242..60369,60775..60880,61096..61264,61482..61703,61919..62083,64272..64394,64685..64842,65024..65473))
location: region:60242-65473:-1
so has part: feature:65024-65473:-1:exon
so has part: feature:64685-64842:-1:exon
so has part: feature:64272-64394:-1:exon
so has part: feature:61919-62083:-1:exon
so has part: feature:61482-61703:-1:exon
so has part: feature:61096-61264:-1:exon
so has part: feature:60775-60880:-1:exon
so has part: feature:60242-60369:-1:exon

position:65473:-1
position: 65473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65024-65473:-1:exon

position:65024:-1
position: 65024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64685-64842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64272-64394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61919-62083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61482-61703:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61096-61264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60775-60880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60242-60369:-1:exon

cts12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: cts12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin L1 isoform X1
translation: MHGIRQIHWMALFSRTALVVVFVLAPLGAATDSEEESPSEWKQWKEAHGVSYEEERDDTERRVIWESNRKLIEENNERFQKGMSEFTMTMNKYGDLNRQEYKQLQGAKINSKTARNGKTVSAWKLRLHAKKLRKSSVDYRPLGYVTEVKDQGYCGSCWAFSTTGAIEGQMFRKTGRLVSLSEQNLVDCSRSYGTYGCSGAWMANAYDYVISNGLQASDTYPYTSVDTQPCFHDRSQVVAQISDYRFIPKGNVQALADALATIGPITVAVDADHPSFLFYSSGIYEEPSCNPNNLSHAVLLVGYGSEEGRDYWIIKNSWGAAWGEGGYMRMRRSRSNTCGIASYALYPIV
SIO_010081: cts12
subclass of: SO_0000673
so part of: cts12
location: complement(join(60270..60369,60775..60880,61096..61264,61482..61703,61919..62083,64272..64394,64685..64842,65024..65030))
location: region:60270-65030:-1
so has part: feature:65024-65030:-1:exon
so has part: feature:64685-64842:-1:exon
so has part: feature:64272-64394:-1:exon
so has part: feature:61919-62083:-1:exon
so has part: feature:61482-61703:-1:exon
so has part: feature:61096-61264:-1:exon
so has part: feature:60775-60880:-1:exon
so has part: feature:60270-60369:-1:exon

XP_026861293.2
type: Protein
SIO_000068: ncbiprotein

position:60270:-1
position: 60270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65030:-1
position: 65030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65024-65030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64685-64842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64272-64394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61919-62083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61482-61703:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61096-61264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60775-60880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60270-60369:-1:exon

cts12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: cts12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin L1 isoform X2
translation: MALFSRTALVVVFVLAPLGAATDSEEESPSEWKQWKEAHGVSYEEERDDTERRVIWESNRKLIEENNERFQKGMSEFTMTMNKYGDLNRQEYKQLQGAKINSKTARNGKTVSAWKLRLHAKKLRKSSVDYRPLGYVTEVKDQGYCGSCWAFSTTGAIEGQMFRKTGRLVSLSEQNLVDCSRSYGTYGCSGAWMANAYDYVISNGLQASDTYPYTSVDTQPCFHDRSQVVAQISDYRFIPKGNVQALADALATIGPITVAVDADHPSFLFYSSGIYEEPSCNPNNLSHAVLLVGYGSEEGRDYWIIKNSWGAAWGEGGYMRMRRSRSNTCGIASYALYPIV
SIO_010081: cts12
subclass of: SO_0000673
so part of: cts12
location: complement(join(60270..60369,60775..60880,61096..61264,61482..61703,61919..62083,64272..64394,64685..64822))
location: region:60270-64822:-1
so has part: feature:64685-64822:-1:exon
so has part: feature:64272-64394:-1:exon
so has part: feature:61919-62083:-1:exon
so has part: feature:61482-61703:-1:exon
so has part: feature:61096-61264:-1:exon
so has part: feature:60775-60880:-1:exon
so has part: feature:60270-60369:-1:exon

XP_026861295.2
type: Protein
SIO_000068: ncbiprotein

position:64822:-1
position: 64822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64685-64822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64272-64394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61919-62083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61482-61703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61096-61264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60775-60880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60270-60369:-1:exon

ankrd29
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: ankrd29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65570..71999
location: region:65570-71999:1
so has part: feature:65570-71999:1:exon
subclass of: SO_0000010

113574514
type: Gene
SIO_000068: ncbigene

position:65570:1
position: 65570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71999:1
position: 71999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65570-71999:1:exon

ankrd29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ankrd29
product: ankyrin repeat domain 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027005495.2
SIO_010081: ankrd29
subclass of: SO_0000673
so part of: ankrd29
location: join(65570..65798,66223..66333,66529..66627,67705..67803,68796..68894,69456..69554,69876..69974,70530..70625,70713..70811,71189..71999)
location: region:65570-71999:1
so has part: feature:65570-65798:1:exon
so has part: feature:66223-66333:1:exon
so has part: feature:66529-66627:1:exon
so has part: feature:67705-67803:1:exon
so has part: feature:68796-68894:1:exon
so has part: feature:69456-69554:1:exon
so has part: feature:69876-69974:1:exon
so has part: feature:70530-70625:1:exon
so has part: feature:70713-70811:1:exon
so has part: feature:71189-71999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65570-65798:1:exon

position:65798:1
position: 65798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66223-66333:1:exon

position:66223:1
position: 66223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66333:1
position: 66333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66529-66627:1:exon

position:66529:1
position: 66529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66627:1
position: 66627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67705-67803:1:exon

position:67705:1
position: 67705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67803:1
position: 67803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68796-68894:1:exon

position:68796:1
position: 68796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68894:1
position: 68894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:69456-69554:1:exon

position:69456:1
position: 69456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69554:1
position: 69554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:69876-69974:1:exon

position:69876:1
position: 69876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69974:1
position: 69974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:70530-70625:1:exon

position:70530:1
position: 70530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70625:1
position: 70625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:70713-70811:1:exon

position:70713:1
position: 70713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70811:1
position: 70811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:71189-71999:1:exon

position:71189:1
position: 71189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ankrd29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ankrd29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29
translation: MSFKKETPLANAVFWAARKGNLALLQLLLNSGRVDVDCKDSYGTSALMVASYSGHYDCARELILQGADINLQRETGSTALFFASQQGHDDIVRLLFEYGASTEFKTKDGGTALSAACQRGHSKVVETLLKNGANIHDQLSDGATPLFLASQEGHVTVIRQLLASGAKVNQPREDAAAPLWMAAQMGHSEVVKVLLLRGADRDADRKDGSTALFKAAHKGHWQVAEELLKFSPCLGLLKNGSTALHAAVLSGSVKTVTLLLRANADATLPNKNNDLPADLTTNERILRILRPQILNGRS
SIO_010081: ankrd29
subclass of: SO_0000673
so part of: ankrd29
location: join(65787..65798,66223..66333,66529..66627,67705..67803,68796..68894,69456..69554,69876..69974,70530..70625,70713..70811,71189..71272)
location: region:65787-71272:1
so has part: feature:65787-65798:1:exon
so has part: feature:66223-66333:1:exon
so has part: feature:66529-66627:1:exon
so has part: feature:67705-67803:1:exon
so has part: feature:68796-68894:1:exon
so has part: feature:69456-69554:1:exon
so has part: feature:69876-69974:1:exon
so has part: feature:70530-70625:1:exon
so has part: feature:70713-70811:1:exon
so has part: feature:71189-71272:1:exon

XP_026861296.1
type: Protein
SIO_000068: ncbiprotein

position:65787:1
position: 65787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71272:1
position: 71272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65787-65798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66223-66333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66529-66627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67705-67803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68796-68894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69456-69554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69876-69974:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70530-70625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70713-70811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71189-71272:1:exon

LOC113574490
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113574490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 72059..77361
location: region:72059-77361:1
so has part: feature:72059-77361:1:exon
subclass of: SO_0000010

113574490
type: Gene
SIO_000068: ncbigene

position:72059:1
position: 72059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77361:1
position: 77361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72059-77361:1:exon

LOC113574490
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113574490
product: vacuolar protein sorting-associated protein 4B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005444.2
SIO_010081: LOC113574490
subclass of: SO_0000673
so part of: LOC113574490
location: join(72059..72285,72870..72981,73425..73569,73659..73717,73884..74003,74167..74323,74997..75145,75230..75311,75502..75721,75997..76131,76755..77361)
location: region:72059-77361:1
so has part: feature:72059-72285:1:exon
so has part: feature:72870-72981:1:exon
so has part: feature:73425-73569:1:exon
so has part: feature:73659-73717:1:exon
so has part: feature:73884-74003:1:exon
so has part: feature:74167-74323:1:exon
so has part: feature:74997-75145:1:exon
so has part: feature:75230-75311:1:exon
so has part: feature:75502-75721:1:exon
so has part: feature:75997-76131:1:exon
so has part: feature:76755-77361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72059-72285:1:exon

position:72285:1
position: 72285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72870-72981:1:exon

position:72870:1
position: 72870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72981:1
position: 72981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73425-73569:1:exon

position:73425:1
position: 73425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73569:1
position: 73569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73659-73717:1:exon

position:73659:1
position: 73659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73717:1
position: 73717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73884-74003:1:exon

position:73884:1
position: 73884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74003:1
position: 74003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74167-74323:1:exon

position:74167:1
position: 74167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74323:1
position: 74323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:74997-75145:1:exon

position:74997:1
position: 74997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75145:1
position: 75145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75230-75311:1:exon

position:75230:1
position: 75230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75311:1
position: 75311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:75502-75721:1:exon

position:75502:1
position: 75502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75721:1
position: 75721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:75997-76131:1:exon

position:75997:1
position: 75997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76131:1
position: 76131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:76755-77361:1:exon

position:76755:1
position: 76755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113574490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113574490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4B-like isoform X1
translation: MSNGSLQKAIDLANKASEEDKAKNYEEALRLYQHSVQYFLHVVKYEAQGEKAKQSIRAKCADYLDRAEQLKEYLKKKEKAPPAKPVKVNDDKGNDGDDGDSSEKKKLQNQLQGAIVMEKPNIKWDDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFSMARQHKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGNDNEGILVLGATNIPWSLDSAIRRRFEKRIYIPLPEDHARSFMFKLHLGSTPNSLTDSDFSTLGQKSEGYSGADISVIVRDALMQPIRKVQSATHFKKVRGKPWNGPDVDDLLTPCSPNDPNAIEMTWVDVAGDKLLEPVVSMADMLGSLEKMKPTVNEEDLKKLKKFTEDFGQEG
SIO_010081: LOC113574490
subclass of: SO_0000673
so part of: LOC113574490
location: join(72265..72285,72870..72981,73425..73569,73659..73717,73884..74003,74167..74323,74997..75145,75230..75311,75502..75721,75997..76131,76755..76856)
location: region:72265-76856:1
so has part: feature:72265-72285:1:exon
so has part: feature:72870-72981:1:exon
so has part: feature:73425-73569:1:exon
so has part: feature:73659-73717:1:exon
so has part: feature:73884-74003:1:exon
so has part: feature:74167-74323:1:exon
so has part: feature:74997-75145:1:exon
so has part: feature:75230-75311:1:exon
so has part: feature:75502-75721:1:exon
so has part: feature:75997-76131:1:exon
so has part: feature:76755-76856:1:exon

XP_026861245.2
type: Protein
SIO_000068: ncbiprotein

position:72265:1
position: 72265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76856:1
position: 76856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72265-72285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72870-72981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73425-73569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73659-73717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73884-74003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74167-74323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74997-75145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75230-75311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75502-75721:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75997-76131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76755-76856:1:exon

LOC113574490
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113574490
product: vacuolar protein sorting-associated protein 4B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005445.2
SIO_010081: LOC113574490
subclass of: SO_0000673
so part of: LOC113574490
location: join(72890..73013,73425..73569,73659..73717,73884..74003,74167..74323,74997..75145,75230..75311,75502..75721,75997..76131,76755..77361)
location: region:72890-77361:1
so has part: feature:72890-73013:1:exon
so has part: feature:73425-73569:1:exon
so has part: feature:73659-73717:1:exon
so has part: feature:73884-74003:1:exon
so has part: feature:74167-74323:1:exon
so has part: feature:74997-75145:1:exon
so has part: feature:75230-75311:1:exon
so has part: feature:75502-75721:1:exon
so has part: feature:75997-76131:1:exon
so has part: feature:76755-77361:1:exon

position:72890:1
position: 72890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72890-73013:1:exon

position:73013:1
position: 73013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73425-73569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73659-73717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73884-74003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74167-74323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74997-75145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75230-75311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75502-75721:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75997-76131:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76755-77361:1:exon

LOC113574490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113574490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4B-like isoform X2
translation: MCSADEAQGEKAKQSIRAKCADYLDRAEQLKEYLKKKEKAPPAKPVKVNDDKGNDGDDGDSSEKKKLQNQLQGAIVMEKPNIKWDDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFSMARQHKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGNDNEGILVLGATNIPWSLDSAIRRRFEKRIYIPLPEDHARSFMFKLHLGSTPNSLTDSDFSTLGQKSEGYSGADISVIVRDALMQPIRKVQSATHFKKVRGKPWNGPDVDDLLTPCSPNDPNAIEMTWVDVAGDKLLEPVVSMADMLGSLEKMKPTVNEEDLKKLKKFTEDFGQEG
SIO_010081: LOC113574490
subclass of: SO_0000673
so part of: LOC113574490
location: join(73001..73013,73425..73569,73659..73717,73884..74003,74167..74323,74997..75145,75230..75311,75502..75721,75997..76131,76755..76856)
location: region:73001-76856:1
so has part: feature:73001-73013:1:exon
so has part: feature:73425-73569:1:exon
so has part: feature:73659-73717:1:exon
so has part: feature:73884-74003:1:exon
so has part: feature:74167-74323:1:exon
so has part: feature:74997-75145:1:exon
so has part: feature:75230-75311:1:exon
so has part: feature:75502-75721:1:exon
so has part: feature:75997-76131:1:exon
so has part: feature:76755-76856:1:exon

XP_026861246.2
type: Protein
SIO_000068: ncbiprotein

position:73001:1
position: 73001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73001-73013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73425-73569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73659-73717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73884-74003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74167-74323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74997-75145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75230-75311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75502-75721:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75997-76131:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76755-76856:1:exon

LOC113574493
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113574493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77529..81225)
location: region:77529-81225:-1
so has part: feature:77529-81225:-1:exon
subclass of: SO_0000010

113574493
type: Gene
SIO_000068: ncbigene

position:77529:-1
position: 77529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81225:-1
position: 81225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77529-81225:-1:exon

LOC113574493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113574493
product: pleckstrin homology domain-containing family B member 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005452.2
SIO_010081: LOC113574493
subclass of: SO_0000673
so part of: LOC113574493
location: complement(join(77529..78740,78906..78983,79269..79355,79687..79726,80135..80237,80385..80537,80792..80854,81122..81225))
location: region:77529-81225:-1
so has part: feature:81122-81225:-1:exon
so has part: feature:80792-80854:-1:exon
so has part: feature:80385-80537:-1:exon
so has part: feature:80135-80237:-1:exon
so has part: feature:79687-79726:-1:exon
so has part: feature:79269-79355:-1:exon
so has part: feature:78906-78983:-1:exon
so has part: feature:77529-78740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81122-81225:-1:exon

position:81122:-1
position: 81122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80792-80854:-1:exon

position:80792:-1
position: 80792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80854:-1
position: 80854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80385-80537:-1:exon

position:80385:-1
position: 80385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80537:-1
position: 80537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80135-80237:-1:exon

position:80135:-1
position: 80135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80237:-1
position: 80237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:79687-79726:-1:exon

position:79687:-1
position: 79687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79726:-1
position: 79726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79269-79355:-1:exon

position:79269:-1
position: 79269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79355:-1
position: 79355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:78906-78983:-1:exon

position:78906:-1
position: 78906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78983:-1
position: 78983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:77529-78740:-1:exon

position:78740:-1
position: 78740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113574493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113574493
product: pleckstrin homology domain-containing family B member 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005449.2
SIO_010081: LOC113574493
subclass of: SO_0000673
so part of: LOC113574493
location: complement(join(77529..78740,78906..78966,79269..79355,79687..79726,80135..80237,80385..80537,80792..80854,81122..81224))
location: region:77529-81224:-1
so has part: feature:81122-81224:-1:exon
so has part: feature:80792-80854:-1:exon
so has part: feature:80385-80537:-1:exon
so has part: feature:80135-80237:-1:exon
so has part: feature:79687-79726:-1:exon
so has part: feature:79269-79355:-1:exon
so has part: feature:78906-78966:-1:exon
so has part: feature:77529-78740:-1:exon

position:81224:-1
position: 81224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81122-81224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80792-80854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80385-80537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80135-80237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79687-79726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79269-79355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78906-78966:-1:exon

position:78966:-1
position: 78966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:77529-78740:-1:exon

LOC113574493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113574493
product: pleckstrin homology domain-containing family B member 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027005450.2
SIO_010081: LOC113574493
subclass of: SO_0000673
so part of: LOC113574493
location: complement(join(77529..78740,78906..78966,79269..79355,79687..79726,80135..80237,80385..80537,80792..80854,81117..81135))
location: region:77529-81135:-1
so has part: feature:81117-81135:-1:exon
so has part: feature:80792-80854:-1:exon
so has part: feature:80385-80537:-1:exon
so has part: feature:80135-80237:-1:exon
so has part: feature:79687-79726:-1:exon
so has part: feature:79269-79355:-1:exon
so has part: feature:78906-78966:-1:exon
so has part: feature:77529-78740:-1:exon

position:81135:-1
position: 81135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81117-81135:-1:exon

position:81117:-1
position: 81117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80792-80854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80385-80537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80135-80237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79687-79726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79269-79355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78906-78966:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77529-78740:-1:exon

LOC113574493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113574493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2-like isoform X1
translation: MALVKSGCLHRQSTILRRWKKNWFELWSDGRLIFYDDQYRRNVEGEIHMKVDCINIRSATACRELTPPEGKGRHSLFQIVCRCGRVISLCAQSAADALAWTMALQDARVNTVVAARHFGFTQEVIASAPPSYWDLNPNRQVYYPDQYGGYVPHPSPYYHQGVYHPHEVSHSITEEHRRDDAADLGLGVLAGAATGLAIGSLFSVF
SIO_010081: LOC113574493
subclass of: SO_0000673
so part of: LOC113574493
location: complement(join(78604..78740,78906..78966,79269..79355,79687..79726,80135..80237,80385..80537,80792..80828))
location: region:78604-80828:-1
so has part: feature:80792-80828:-1:exon
so has part: feature:80385-80537:-1:exon
so has part: feature:80135-80237:-1:exon
so has part: feature:79687-79726:-1:exon
so has part: feature:79269-79355:-1:exon
so has part: feature:78906-78966:-1:exon
so has part: feature:78604-78740:-1:exon

XP_026861250.2
type: Protein
SIO_000068: ncbiprotein

position:78604:-1
position: 78604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80828:-1
position: 80828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80792-80828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80385-80537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80135-80237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79687-79726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79269-79355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78906-78966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78604-78740:-1:exon

LOC113574493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113574493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2-like isoform X1
translation: MALVKSGCLHRQSTILRRWKKNWFELWSDGRLIFYDDQYRRNVEGEIHMKVDCINIRSATACRELTPPEGKGRHSLFQIVCRCGRVISLCAQSAADALAWTMALQDARVNTVVAARHFGFTQEVIASAPPSYWDLNPNRQVYYPDQYGGYVPHPSPYYHQGVYHPHEVSHSITEEHRRDDAADLGLGVLAGAATGLAIGSLFSVF
SIO_010081: LOC113574493
subclass of: SO_0000673
so part of: LOC113574493
location: complement(join(78604..78740,78906..78966,79269..79355,79687..79726,80135..80237,80385..80537,80792..80828))
location: region:78604-80828:-1
so has part: feature:80792-80828:-1:exon
so has part: feature:80385-80537:-1:exon
so has part: feature:80135-80237:-1:exon
so has part: feature:79687-79726:-1:exon
so has part: feature:79269-79355:-1:exon
so has part: feature:78906-78966:-1:exon
so has part: feature:78604-78740:-1:exon

XP_026861251.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80792-80828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80385-80537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80135-80237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79687-79726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79269-79355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78906-78966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78604-78740:-1:exon

LOC113574493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113574493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2-like isoform X2
translation: MALVKSGCLHRQSTILRRWKKNWFELWSDGRLIFYDDQYRRNVEGEIHMKVDCINIRSATACRELTPPEGKGRHSLFQIVCRCGRVISLCAQSAADALAWTMALQDARVNTVVAARHFGFTQEVIASAPPSYWDLNPNRQVLFVSRCTTQTSTAATCLIPLPTTIKEFTIHMKSVTASLKSIAVTMQPIWVLGC
SIO_010081: LOC113574493
subclass of: SO_0000673
so part of: LOC113574493
location: complement(join(78654..78740,78906..78983,79269..79355,79687..79726,80135..80237,80385..80537,80792..80828))
location: region:78654-80828:-1
so has part: feature:80792-80828:-1:exon
so has part: feature:80385-80537:-1:exon
so has part: feature:80135-80237:-1:exon
so has part: feature:79687-79726:-1:exon
so has part: feature:79269-79355:-1:exon
so has part: feature:78906-78983:-1:exon
so has part: feature:78654-78740:-1:exon

XP_026861253.2
type: Protein
SIO_000068: ncbiprotein

position:78654:-1
position: 78654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80792-80828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80385-80537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80135-80237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79687-79726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79269-79355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78906-78983:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78654-78740:-1:exon

si:dkey-121a11.3
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 82472..109153
location: region:82472-109153:1
so has part: feature:82472-109153:1:exon
subclass of: SO_0000010

113574489
type: Gene
SIO_000068: ncbigene

position:82472:1
position: 82472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109153:1
position: 109153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82472-109153:1:exon

si:dkey-121a11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523172.1
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(82472..83542,85017..85267,95055..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..109153)
location: region:82472-109153:1
so has part: feature:82472-83542:1:exon
so has part: feature:85017-85267:1:exon
so has part: feature:95055-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-109153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82472-83542:1:exon

position:83542:1
position: 83542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85017-85267:1:exon

position:85017:1
position: 85017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85267:1
position: 85267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95055-95781:1:exon

position:95055:1
position: 95055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95781:1
position: 95781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96834-96894:1:exon

position:96834:1
position: 96834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96894:1
position: 96894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97860-98000:1:exon

position:97860:1
position: 97860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98000:1
position: 98000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:99526-100715:1:exon

position:99526:1
position: 99526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100715:1
position: 100715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:101406-101532:1:exon

position:101406:1
position: 101406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101532:1
position: 101532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:102155-102392:1:exon

position:102155:1
position: 102155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102392:1
position: 102392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102908-103032:1:exon

position:102908:1
position: 102908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103032:1
position: 103032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:104812-104984:1:exon

position:104812:1
position: 104812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104984:1
position: 104984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:105296-109153:1:exon

position:105296:1
position: 105296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-121a11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523173.1
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(83563..84816,85017..85267,95055..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..109153)
location: region:83563-109153:1
so has part: feature:83563-84816:1:exon
so has part: feature:85017-85267:1:exon
so has part: feature:95055-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-109153:1:exon

position:83563:1
position: 83563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83563-84816:1:exon

position:84816:1
position: 84816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85017-85267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95055-95781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105296-109153:1:exon

si:dkey-121a11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1614 isoform X2
translation: MEEVGVAKESNVVKPASRHPLSSSGNRTENQERTEAYPSSSSWEQTSPGSSSLCPDFWLCAPASQASAVSAKVKALLERDADQKRSCKNLHQKDIHGFHTLAQARTGTWSPGSSDEEIEPHSTVFTFTSAEGEHCEMLPDEGELHGDTSVTLLDLSRALGEDLENIEADDICNTKLEVSSGCEKPWVQPKDSWSMARPKAQLLNRNISQGGEGPMSRLMPSECEELQRSDSLGSHPQSHMSTESSPGRAAESRLGRAESVESSSSSSGGSLSLAERVEMNRRVLRQMLQKAHSKGTEGHQGPLSNQRLHNTYNKGGLNDTDYDSGIPLHDWKHQRAFPSATVLPLSPHHQQSKRLPEHARMKGRSHPLKADHTILPVRRDTPGLLPQSGASKVGRAGVVAGAGSGNLSDSSSSDSTCSGRRRPGHSPTRVRFQDESEKDAEVRYQDRVRQRRWAAERAQGPLGSKPSLAAYIDSRTGEAEPTAEHKSGRSQEVSRNGNSHYGALLCSHVGQQCEACGSVLDKASPLLPNSITFPLESANEEAEEKLVPCWLAATLPSHPVRIERIRETYVGPSDSLIMDSDGTRCRTAVTRDTAASTRTLERSKRRGMEEESSPETISTSRDGPGGLEAPCSGSPGQLETGLLNGTAALPPNPYAPEPAGKSPLVSKARLVSTMPPGGDPLPQPVPPPLQSRKSALKPATVDRSRGHRGTGLRLSPPHRPAHREPPEAAGDEGFSPQESLREGSQVLINHCPTQKGFAASSQSGDTAVRPGRPGPKPAGLEQDQITRASPTETVHGHLTEGAVQGPIRPEHEKEDSPSPSADGVSDEGQRDVRPRLSLRRFFSAIGLRPGAGPLRRGRSSSAEQLGPPPETPAASPVRPRTAQAEPGLLRKTPSLQSLRLGSPFLQLKKFSSVQNLQSPKRKLDRSSAYTPGEEPRSPAPSRGLLRSLSVEDVGCPSALRAVGRVAQVFPDGTLLLELSRPPTGTFGFLISRGKGRLDSGVYVEEMGDSSTQKLYAGLLGVGDEIVEVSGQKVAGLSLDTVTRLMTQSGTSSLRVLRQRPPTPPR
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(85052..85267,95055..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..105495)
location: region:85052-105495:1
so has part: feature:85052-85267:1:exon
so has part: feature:95055-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-105495:1:exon

XP_035379065.1
type: Protein
SIO_000068: ncbiprotein

position:85052:1
position: 85052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105495:1
position: 105495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85052-85267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95055-95781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105296-105495:1:exon

si:dkey-121a11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1614 isoform X2
translation: MEEVGVAKESNVVKPASRHPLSSSGNRTENQERTEAYPSSSSWEQTSPGSSSLCPDFWLCAPASQASAVSAKVKALLERDADQKRSCKNLHQKDIHGFHTLAQARTGTWSPGSSDEEIEPHSTVFTFTSAEGEHCEMLPDEGELHGDTSVTLLDLSRALGEDLENIEADDICNTKLEVSSGCEKPWVQPKDSWSMARPKAQLLNRNISQGGEGPMSRLMPSECEELQRSDSLGSHPQSHMSTESSPGRAAESRLGRAESVESSSSSSGGSLSLAERVEMNRRVLRQMLQKAHSKGTEGHQGPLSNQRLHNTYNKGGLNDTDYDSGIPLHDWKHQRAFPSATVLPLSPHHQQSKRLPEHARMKGRSHPLKADHTILPVRRDTPGLLPQSGASKVGRAGVVAGAGSGNLSDSSSSDSTCSGRRRPGHSPTRVRFQDESEKDAEVRYQDRVRQRRWAAERAQGPLGSKPSLAAYIDSRTGEAEPTAEHKSGRSQEVSRNGNSHYGALLCSHVGQQCEACGSVLDKASPLLPNSITFPLESANEEAEEKLVPCWLAATLPSHPVRIERIRETYVGPSDSLIMDSDGTRCRTAVTRDTAASTRTLERSKRRGMEEESSPETISTSRDGPGGLEAPCSGSPGQLETGLLNGTAALPPNPYAPEPAGKSPLVSKARLVSTMPPGGDPLPQPVPPPLQSRKSALKPATVDRSRGHRGTGLRLSPPHRPAHREPPEAAGDEGFSPQESLREGSQVLINHCPTQKGFAASSQSGDTAVRPGRPGPKPAGLEQDQITRASPTETVHGHLTEGAVQGPIRPEHEKEDSPSPSADGVSDEGQRDVRPRLSLRRFFSAIGLRPGAGPLRRGRSSSAEQLGPPPETPAASPVRPRTAQAEPGLLRKTPSLQSLRLGSPFLQLKKFSSVQNLQSPKRKLDRSSAYTPGEEPRSPAPSRGLLRSLSVEDVGCPSALRAVGRVAQVFPDGTLLLELSRPPTGTFGFLISRGKGRLDSGVYVEEMGDSSTQKLYAGLLGVGDEIVEVSGQKVAGLSLDTVTRLMTQSGTSSLRVLRQRPPTPPR
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(85052..85267,95055..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..105495)
location: region:85052-105495:1
so has part: feature:85052-85267:1:exon
so has part: feature:95055-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-105495:1:exon

XP_035379066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85052-85267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95055-95781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105296-105495:1:exon

si:dkey-121a11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523175.1
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(85176..85571,95370..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..109153)
location: region:85176-109153:1
so has part: feature:85176-85571:1:exon
so has part: feature:95370-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-109153:1:exon

position:85176:1
position: 85176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85176-85571:1:exon

position:85571:1
position: 85571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95370-95781:1:exon

position:95370:1
position: 95370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105296-109153:1:exon

si:dkey-121a11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1614 isoform X4
translation: MKVSSMVTLLDLSRALGEGLENIEADDICNTKLEVSSGCEKPWVQPKDSWSMARPKAQLLNRNISQGGEGPMSRLMPSECEELQRSDSLGSHPQSHMSTESSPGRAAESRLGRAESVESSSSSSGGSLSLAERVEMNRRVLRQMLQKAHSKGTEGHQGPLSNQRLHNTYNKGGLNDTDYDSGIPLHDWKHQRAFPSATVLPLSPHHQQSKRLPEHARMKGRSHPLKADHTILPVRRDTPGLLPQSGASKVGRAGVVAGAGSGNLSDSSSSDSTCSGRRRPGHSPTRVRFQDESEKDAEVRYQDRVRQRRWAAERAQGPLGSKPSLAAYIDSRTGEAEPTAEHKSGRSQEVSRNGNSHYGALLCSHVGQQCEACGSVLDKASPLLPNSITFPLESANEEAEEKLVPCWLAATLPSHPVRIERIRETYVGPSDSLIMDSDGTRCRTAVTRDTAASTRTLERSKRRGMEEESSPETISTSRDGPGGLEAPCSGSPGQLETGLLNGTAALPPNPYAPEPAGKSPLVSKARLVSTMPPGGDPLPQPVPPPLQSRKSALKPATVDRSRGHRGTGLRLSPPHRPAHREPPEAAGDEGFSPQESLREGSQVLINHCPTQKGFAASSQSGDTAVRPGRPGPKPAGLEQDQITRASPTETVHGHLTEGAVQGPIRPEHEKEDSPSPSADGVSDEGQRDVRPRLSLRRFFSAIGLRPGAGPLRRGRSSSAEQLGPPPETPAASPVRPRTAQAEPGLLRKTPSLQSLRLGSPFLQLKKFSSVQNLQSPKRKLDRSSAYTPGEEPRSPAPSRGLLRSLSVEDVGCPSALRAVGRVAQVFPDGTLLLELSRPPTGTFGFLISRGKGRLDSGVYVEEMGDSSTQKLYAGLLGVGDEIVEVSGQKVAGLSLDTVTRLMTQSGTSSLRVLRQRPPTPPR
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(85470..85571,95370..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..105495)
location: region:85470-105495:1
so has part: feature:85470-85571:1:exon
so has part: feature:95370-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-105495:1:exon

XP_035379068.1
type: Protein
SIO_000068: ncbiprotein

position:85470:1
position: 85470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85470-85571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95370-95781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105296-105495:1:exon

plekhb2
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: plekhb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(87545..90964)
location: region:87545-90964:-1
so has part: feature:87545-90964:-1:exon
subclass of: SO_0000010

118240823
type: Gene
SIO_000068: ncbigene

position:87545:-1
position: 87545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90964:-1
position: 90964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87545-90964:-1:exon

plekhb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: plekhb2
product: pleckstrin homology domain containing, family B (evectins) member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035523179.1
SIO_010081: plekhb2
subclass of: SO_0000673
so part of: plekhb2
location: complement(join(87545..88485,88651..88728,89014..89100,89426..89465,89874..89976,90124..90276,90531..90593,90861..90964))
location: region:87545-90964:-1
so has part: feature:90861-90964:-1:exon
so has part: feature:90531-90593:-1:exon
so has part: feature:90124-90276:-1:exon
so has part: feature:89874-89976:-1:exon
so has part: feature:89426-89465:-1:exon
so has part: feature:89014-89100:-1:exon
so has part: feature:88651-88728:-1:exon
so has part: feature:87545-88485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90861-90964:-1:exon

position:90861:-1
position: 90861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90531-90593:-1:exon

position:90531:-1
position: 90531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90593:-1
position: 90593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90124-90276:-1:exon

position:90124:-1
position: 90124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90276:-1
position: 90276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89874-89976:-1:exon

position:89874:-1
position: 89874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89976:-1
position: 89976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89426-89465:-1:exon

position:89426:-1
position: 89426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89465:-1
position: 89465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:89014-89100:-1:exon

position:89014:-1
position: 89014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89100:-1
position: 89100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:88651-88728:-1:exon

position:88651:-1
position: 88651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88728:-1
position: 88728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87545-88485:-1:exon

position:88485:-1
position: 88485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

plekhb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: plekhb2
product: pleckstrin homology domain containing, family B (evectins) member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035523177.1
SIO_010081: plekhb2
subclass of: SO_0000673
so part of: plekhb2
location: complement(join(87545..88485,88651..88711,89014..89100,89426..89465,89874..89976,90124..90276,90531..90593,90861..90963))
location: region:87545-90963:-1
so has part: feature:90861-90963:-1:exon
so has part: feature:90531-90593:-1:exon
so has part: feature:90124-90276:-1:exon
so has part: feature:89874-89976:-1:exon
so has part: feature:89426-89465:-1:exon
so has part: feature:89014-89100:-1:exon
so has part: feature:88651-88711:-1:exon
so has part: feature:87545-88485:-1:exon

position:90963:-1
position: 90963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90861-90963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90531-90593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90124-90276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89874-89976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89426-89465:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89014-89100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88651-88711:-1:exon

position:88711:-1
position: 88711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87545-88485:-1:exon

plekhb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: plekhb2
product: pleckstrin homology domain containing, family B (evectins) member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035523178.1
SIO_010081: plekhb2
subclass of: SO_0000673
so part of: plekhb2
location: complement(join(87545..88485,88651..88711,89014..89100,89426..89465,89874..89976,90124..90276,90531..90593,90856..90874))
location: region:87545-90874:-1
so has part: feature:90856-90874:-1:exon
so has part: feature:90531-90593:-1:exon
so has part: feature:90124-90276:-1:exon
so has part: feature:89874-89976:-1:exon
so has part: feature:89426-89465:-1:exon
so has part: feature:89014-89100:-1:exon
so has part: feature:88651-88711:-1:exon
so has part: feature:87545-88485:-1:exon

position:90874:-1
position: 90874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90856-90874:-1:exon

position:90856:-1
position: 90856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90531-90593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90124-90276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89874-89976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89426-89465:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89014-89100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88651-88711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87545-88485:-1:exon

plekhb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: plekhb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2 isoform X1
translation: MALVKSGCLHRQSTILRRWKKNWFELWSDGRLIFYDDQYRRNVEGEIHMKVDCINIRSATACRELTPPEGKGRHSLFQIVCRCGRVISLCAQSAADALAWTMALQDARVNTVVAARHFGFTQEVIASAPPSYWDLNPNRQVYYPDQYGGYVPHPSPYYHQGVYHPHEVSHIIIEEHRRDDAADLGLGVLAGAATGLAIGSLFSVF
SIO_010081: plekhb2
subclass of: SO_0000673
so part of: plekhb2
location: complement(join(88349..88485,88651..88711,89014..89100,89426..89465,89874..89976,90124..90276,90531..90567))
location: region:88349-90567:-1
so has part: feature:90531-90567:-1:exon
so has part: feature:90124-90276:-1:exon
so has part: feature:89874-89976:-1:exon
so has part: feature:89426-89465:-1:exon
so has part: feature:89014-89100:-1:exon
so has part: feature:88651-88711:-1:exon
so has part: feature:88349-88485:-1:exon

XP_035379070.1
type: Protein
SIO_000068: ncbiprotein

position:88349:-1
position: 88349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90567:-1
position: 90567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90531-90567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90124-90276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89874-89976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89426-89465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89014-89100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88651-88711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88349-88485:-1:exon

plekhb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: plekhb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2 isoform X1
translation: MALVKSGCLHRQSTILRRWKKNWFELWSDGRLIFYDDQYRRNVEGEIHMKVDCINIRSATACRELTPPEGKGRHSLFQIVCRCGRVISLCAQSAADALAWTMALQDARVNTVVAARHFGFTQEVIASAPPSYWDLNPNRQVYYPDQYGGYVPHPSPYYHQGVYHPHEVSHIIIEEHRRDDAADLGLGVLAGAATGLAIGSLFSVF
SIO_010081: plekhb2
subclass of: SO_0000673
so part of: plekhb2
location: complement(join(88349..88485,88651..88711,89014..89100,89426..89465,89874..89976,90124..90276,90531..90567))
location: region:88349-90567:-1
so has part: feature:90531-90567:-1:exon
so has part: feature:90124-90276:-1:exon
so has part: feature:89874-89976:-1:exon
so has part: feature:89426-89465:-1:exon
so has part: feature:89014-89100:-1:exon
so has part: feature:88651-88711:-1:exon
so has part: feature:88349-88485:-1:exon

XP_035379071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90531-90567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90124-90276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89874-89976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89426-89465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89014-89100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88651-88711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88349-88485:-1:exon

plekhb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: plekhb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2 isoform X2
translation: MALVKSGCLHRQSTILRRWKKNWFELWSDGRLIFYDDQYRRNVEGEIHMKVDCINIRSATACRELTPPEGKGRHSLFQIVCRCGRVISLCAQSAADALAWTMALQDARVNTVVAARHFGFTQEVIASAPPSYWDLNPNRQVLFVSRCTTQTSTAATCLIPLPTTIKEFTIHMKSVTSSLKSIAVTMQPIWVLGC
SIO_010081: plekhb2
subclass of: SO_0000673
so part of: plekhb2
location: complement(join(88399..88485,88651..88728,89014..89100,89426..89465,89874..89976,90124..90276,90531..90567))
location: region:88399-90567:-1
so has part: feature:90531-90567:-1:exon
so has part: feature:90124-90276:-1:exon
so has part: feature:89874-89976:-1:exon
so has part: feature:89426-89465:-1:exon
so has part: feature:89014-89100:-1:exon
so has part: feature:88651-88728:-1:exon
so has part: feature:88399-88485:-1:exon

XP_035379072.1
type: Protein
SIO_000068: ncbiprotein

position:88399:-1
position: 88399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90531-90567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90124-90276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89874-89976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89426-89465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89014-89100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88651-88728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88399-88485:-1:exon

si:dkey-121a11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523171.1
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(92246..93298,94499..94613,94795..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..109153)
location: region:92246-109153:1
so has part: feature:92246-93298:1:exon
so has part: feature:94499-94613:1:exon
so has part: feature:94795-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-109153:1:exon

position:92246:1
position: 92246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92246-93298:1:exon

position:93298:1
position: 93298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94499-94613:1:exon

position:94499:1
position: 94499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94613:1
position: 94613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94795-95781:1:exon

position:94795:1
position: 94795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105296-109153:1:exon

si:dkey-121a11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035523170.1
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(92246..93298,94499..94595,94795..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..109153)
location: region:92246-109153:1
so has part: feature:92246-93298:1:exon
so has part: feature:94499-94595:1:exon
so has part: feature:94795-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-109153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92246-93298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94499-94595:1:exon

position:94595:1
position: 94595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94795-95781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105296-109153:1:exon

si:dkey-121a11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035523169.1
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(92246..93298,94795..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..109153)
location: region:92246-109153:1
so has part: feature:92246-93298:1:exon
so has part: feature:94795-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-109153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92246-93298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94795-95781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105296-109153:1:exon

si:dkey-121a11.3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004775654.1
SIO_010081: si:dkey-121a11.3
so part of: si:dkey-121a11.3
location: join(92246..93298,94795..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..105577,105738..109153)
location: region:92246-109153:1
so has part: feature:92246-93298:1:exon
so has part: feature:94795-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-105577:1:exon
so has part: feature:105738-109153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92246-93298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94795-95781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105296-105577:1:exon

position:105577:1
position: 105577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:105738-109153:1:exon

position:105738:1
position: 105738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-121a11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: si:dkey-121a11.3
product: uncharacterized protein KIAA1614, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035523174.1
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(92246..93298,94795..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,103279..103645)
location: region:92246-103645:1
so has part: feature:92246-93298:1:exon
so has part: feature:94795-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:103279-103645:1:exon

position:103645:1
position: 103645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92246-93298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94795-95781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103279-103645:1:exon

position:103279:1
position: 103279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-121a11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1614 isoform X1
translation: MEEVGVAKESNVVKPASRHPLSSSGNRTENQERTEAYPSSSSWEQTSPGSSSLCPDFWLCAPASQASAVSALQSKVKALLERDADQKRSCKNLHQKDIHGFHTLAQARTGTWSPGSSDEEIEPHSTVFTFTSAEGEHCEMLPDEGELHGDTSVTLLDLSRALGEDLENIEADDICNTKLEVSSGCEKPWVQPKDSWSMARPKAQLLNRNISQGGEGPMSRLMPSECEELQRSDSLGSHPQSHMSTESSPGRAAESRLGRAESVESSSSSSGGSLSLAERVEMNRRVLRQMLQKAHSKGTEGHQGPLSNQRLHNTYNKGGLNDTDYDSGIPLHDWKHQRAFPSATVLPLSPHHQQSKRLPEHARMKGRSHPLKADHTILPVRRDTPGLLPQSGASKVGRAGVVAGAGSGNLSDSSSSDSTCSGRRRPGHSPTRVRFQDESEKDAEVRYQDRVRQRRWAAERAQGPLGSKPSLAAYIDSRTGEAEPTAEHKSGRSQEVSRNGNSHYGALLCSHVGQQCEACGSVLDKASPLLPNSITFPLESANEEAEEKLVPCWLAATLPSHPVRIERIRETYVGPSDSLIMDSDGTRCRTAVTRDTAASTRTLERSKRRGMEEESSPETISTSRDGPGGLEAPCSGSPGQLETGLLNGTAALPPNPYAPEPAGKSPLVSKARLVSTMPPGGDPLPQPVPPPLQSRKSALKPATVDRSRGHRGTGLRLSPPHRPAHREPPEAAGDEGFSPQESLREGSQVLINHCPTQKGFAASSQSGDTAVRPGRPGPKPAGLEQDQITRASPTETVHGHLTEGAVQGPIRPEHEKEDSPSPSADGVSDEGQRDVRPRLSLRRFFSAIGLRPGAGPLRRGRSSSAEQLGPPPETPAASPVRPRTAQAEPGLLRKTPSLQSLRLGSPFLQLKKFSSVQNLQSPKRKLDRSSAYTPGEEPRSPAPSRGLLRSLSVEDVGCPSALRAVGRVAQVFPDGTLLLELSRPPTGTFGFLISRGKGRLDSGVYVEEMGDSSTQKLYAGLLGVGDEIVEVSGQKVAGLSLDTVTRLMTQSGTSSLRVLRQRPPTPPR
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(94830..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..105495)
location: region:94830-105495:1
so has part: feature:94830-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-105495:1:exon

XP_035379062.1
type: Protein
SIO_000068: ncbiprotein

position:94830:1
position: 94830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94830-95781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105296-105495:1:exon

si:dkey-121a11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1614 isoform X1
translation: MEEVGVAKESNVVKPASRHPLSSSGNRTENQERTEAYPSSSSWEQTSPGSSSLCPDFWLCAPASQASAVSALQSKVKALLERDADQKRSCKNLHQKDIHGFHTLAQARTGTWSPGSSDEEIEPHSTVFTFTSAEGEHCEMLPDEGELHGDTSVTLLDLSRALGEDLENIEADDICNTKLEVSSGCEKPWVQPKDSWSMARPKAQLLNRNISQGGEGPMSRLMPSECEELQRSDSLGSHPQSHMSTESSPGRAAESRLGRAESVESSSSSSGGSLSLAERVEMNRRVLRQMLQKAHSKGTEGHQGPLSNQRLHNTYNKGGLNDTDYDSGIPLHDWKHQRAFPSATVLPLSPHHQQSKRLPEHARMKGRSHPLKADHTILPVRRDTPGLLPQSGASKVGRAGVVAGAGSGNLSDSSSSDSTCSGRRRPGHSPTRVRFQDESEKDAEVRYQDRVRQRRWAAERAQGPLGSKPSLAAYIDSRTGEAEPTAEHKSGRSQEVSRNGNSHYGALLCSHVGQQCEACGSVLDKASPLLPNSITFPLESANEEAEEKLVPCWLAATLPSHPVRIERIRETYVGPSDSLIMDSDGTRCRTAVTRDTAASTRTLERSKRRGMEEESSPETISTSRDGPGGLEAPCSGSPGQLETGLLNGTAALPPNPYAPEPAGKSPLVSKARLVSTMPPGGDPLPQPVPPPLQSRKSALKPATVDRSRGHRGTGLRLSPPHRPAHREPPEAAGDEGFSPQESLREGSQVLINHCPTQKGFAASSQSGDTAVRPGRPGPKPAGLEQDQITRASPTETVHGHLTEGAVQGPIRPEHEKEDSPSPSADGVSDEGQRDVRPRLSLRRFFSAIGLRPGAGPLRRGRSSSAEQLGPPPETPAASPVRPRTAQAEPGLLRKTPSLQSLRLGSPFLQLKKFSSVQNLQSPKRKLDRSSAYTPGEEPRSPAPSRGLLRSLSVEDVGCPSALRAVGRVAQVFPDGTLLLELSRPPTGTFGFLISRGKGRLDSGVYVEEMGDSSTQKLYAGLLGVGDEIVEVSGQKVAGLSLDTVTRLMTQSGTSSLRVLRQRPPTPPR
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(94830..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..105495)
location: region:94830-105495:1
so has part: feature:94830-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-105495:1:exon

XP_035379063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94830-95781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105296-105495:1:exon

si:dkey-121a11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1614 isoform X1
translation: MEEVGVAKESNVVKPASRHPLSSSGNRTENQERTEAYPSSSSWEQTSPGSSSLCPDFWLCAPASQASAVSALQSKVKALLERDADQKRSCKNLHQKDIHGFHTLAQARTGTWSPGSSDEEIEPHSTVFTFTSAEGEHCEMLPDEGELHGDTSVTLLDLSRALGEDLENIEADDICNTKLEVSSGCEKPWVQPKDSWSMARPKAQLLNRNISQGGEGPMSRLMPSECEELQRSDSLGSHPQSHMSTESSPGRAAESRLGRAESVESSSSSSGGSLSLAERVEMNRRVLRQMLQKAHSKGTEGHQGPLSNQRLHNTYNKGGLNDTDYDSGIPLHDWKHQRAFPSATVLPLSPHHQQSKRLPEHARMKGRSHPLKADHTILPVRRDTPGLLPQSGASKVGRAGVVAGAGSGNLSDSSSSDSTCSGRRRPGHSPTRVRFQDESEKDAEVRYQDRVRQRRWAAERAQGPLGSKPSLAAYIDSRTGEAEPTAEHKSGRSQEVSRNGNSHYGALLCSHVGQQCEACGSVLDKASPLLPNSITFPLESANEEAEEKLVPCWLAATLPSHPVRIERIRETYVGPSDSLIMDSDGTRCRTAVTRDTAASTRTLERSKRRGMEEESSPETISTSRDGPGGLEAPCSGSPGQLETGLLNGTAALPPNPYAPEPAGKSPLVSKARLVSTMPPGGDPLPQPVPPPLQSRKSALKPATVDRSRGHRGTGLRLSPPHRPAHREPPEAAGDEGFSPQESLREGSQVLINHCPTQKGFAASSQSGDTAVRPGRPGPKPAGLEQDQITRASPTETVHGHLTEGAVQGPIRPEHEKEDSPSPSADGVSDEGQRDVRPRLSLRRFFSAIGLRPGAGPLRRGRSSSAEQLGPPPETPAASPVRPRTAQAEPGLLRKTPSLQSLRLGSPFLQLKKFSSVQNLQSPKRKLDRSSAYTPGEEPRSPAPSRGLLRSLSVEDVGCPSALRAVGRVAQVFPDGTLLLELSRPPTGTFGFLISRGKGRLDSGVYVEEMGDSSTQKLYAGLLGVGDEIVEVSGQKVAGLSLDTVTRLMTQSGTSSLRVLRQRPPTPPR
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(94830..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,104812..104984,105296..105495)
location: region:94830-105495:1
so has part: feature:94830-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:104812-104984:1:exon
so has part: feature:105296-105495:1:exon

XP_035379064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94830-95781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:104812-104984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105296-105495:1:exon

si:dkey-121a11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: si:dkey-121a11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1614 isoform X3
translation: MEEVGVAKESNVVKPASRHPLSSSGNRTENQERTEAYPSSSSWEQTSPGSSSLCPDFWLCAPASQASAVSALQSKVKALLERDADQKRSCKNLHQKDIHGFHTLAQARTGTWSPGSSDEEIEPHSTVFTFTSAEGEHCEMLPDEGELHGDTSVTLLDLSRALGEDLENIEADDICNTKLEVSSGCEKPWVQPKDSWSMARPKAQLLNRNISQGGEGPMSRLMPSECEELQRSDSLGSHPQSHMSTESSPGRAAESRLGRAESVESSSSSSGGSLSLAERVEMNRRVLRQMLQKAHSKGTEGHQGPLSNQRLHNTYNKGGLNDTDYDSGIPLHDWKHQRAFPSATVLPLSPHHQQSKRLPEHARMKGRSHPLKADHTILPVRRDTPGLLPQSGASKVGRAGVVAGAGSGNLSDSSSSDSTCSGRRRPGHSPTRVRFQDESEKDAEVRYQDRVRQRRWAAERAQGPLGSKPSLAAYIDSRTGEAEPTAEHKSGRSQEVSRNGNSHYGALLCSHVGQQCEACGSVLDKASPLLPNSITFPLESANEEAEEKLVPCWLAATLPSHPVRIERIRETYVGPSDSLIMDSDGTRCRTAVTRDTAASTRTLERSKRRGMEEESSPETISTSRDGPGGLEAPCSGSPGQLETGLLNGTAALPPNPYAPEPAGKSPLVSKARLVSTMPPGGDPLPQPVPPPLQSRKSALKPATVDRSRGHRGTGLRLSPPHRPAHREPPEAAGDEGFSPQESLREGSQVLINHCPTQKGFAASSQSGDTAVRPGRPGPKPAGLEQDQITRASPTETVHGHLTEGAVQGPIRPEHEKEDSPSPSADGVSDEGQRDVRPRLSLRRFFSAIGLRPGAGPLRRGRSSSAEQLGPPPETPAASPVRPRTAQAEPGLLRKTPSLQSLRLGSPFLQLKKFSSVQNLQSPKRKLDRSSAYTPGEEPRSPAPSS
SIO_010081: si:dkey-121a11.3
subclass of: SO_0000673
so part of: si:dkey-121a11.3
location: join(94830..95781,96834..96894,97860..98000,99526..100715,101406..101532,102155..102392,102908..103032,103279..103282)
location: region:94830-103282:1
so has part: feature:94830-95781:1:exon
so has part: feature:96834-96894:1:exon
so has part: feature:97860-98000:1:exon
so has part: feature:99526-100715:1:exon
so has part: feature:101406-101532:1:exon
so has part: feature:102155-102392:1:exon
so has part: feature:102908-103032:1:exon
so has part: feature:103279-103282:1:exon

XP_035379067.1
type: Protein
SIO_000068: ncbiprotein

position:103282:1
position: 103282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94830-95781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96834-96894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97860-98000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99526-100715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101406-101532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102155-102392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102908-103032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103279-103282:1:exon

stx6
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: stx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(104955..130960)
location: region:104955-130960:-1
so has part: feature:104955-130960:-1:exon
subclass of: SO_0000010

113574492
type: Gene
SIO_000068: ncbigene

position:104955:-1
position: 104955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130960:-1
position: 130960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104955-130960:-1:exon

stx6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8005
gene: stx6
product: syntaxin 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003410329.2
SIO_010081: stx6
so part of: stx6
location: complement(join(104955..105034,110973..111114,111669..111763,112051..112157,112416..112544,112782..112844,112966..113060,113157..113326,118836..118895))
location: region:104955-118895:-1
so has part: feature:118836-118895:-1:exon
so has part: feature:113157-113326:-1:exon
so has part: feature:112966-113060:-1:exon
so has part: feature:112782-112844:-1:exon
so has part: feature:112416-112544:-1:exon
so has part: feature:112051-112157:-1:exon
so has part: feature:111669-111763:-1:exon
so has part: feature:110973-111114:-1:exon
so has part: feature:104955-105034:-1:exon

position:118895:-1
position: 118895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118836-118895:-1:exon

position:118836:-1
position: 118836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113157-113326:-1:exon

position:113157:-1
position: 113157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113326:-1
position: 113326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:112966-113060:-1:exon

position:112966:-1
position: 112966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113060:-1
position: 113060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:112782-112844:-1:exon

position:112782:-1
position: 112782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112844:-1
position: 112844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:112416-112544:-1:exon

position:112416:-1
position: 112416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112544:-1
position: 112544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:112051-112157:-1:exon

position:112051:-1
position: 112051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112157:-1
position: 112157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:111669-111763:-1:exon

position:111669:-1
position: 111669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111763:-1
position: 111763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:110973-111114:-1:exon

position:110973:-1
position: 110973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111114:-1
position: 111114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:104955-105034:-1:exon

position:105034:-1
position: 105034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

stx6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: stx6
product: syntaxin 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027005447.2
SIO_010081: stx6
subclass of: SO_0000673
so part of: stx6
location: complement(join(107917..111114,111669..111763,112051..112157,112416..112544,112782..112844,112966..113060,113157..113326,118836..118895))
location: region:107917-118895:-1
so has part: feature:118836-118895:-1:exon
so has part: feature:113157-113326:-1:exon
so has part: feature:112966-113060:-1:exon
so has part: feature:112782-112844:-1:exon
so has part: feature:112416-112544:-1:exon
so has part: feature:112051-112157:-1:exon
so has part: feature:111669-111763:-1:exon
so has part: feature:107917-111114:-1:exon

position:107917:-1
position: 107917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118836-118895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113157-113326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112966-113060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112782-112844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112416-112544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112051-112157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111669-111763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107917-111114:-1:exon

stx6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: stx6
product: syntaxin 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005448.2
SIO_010081: stx6
subclass of: SO_0000673
so part of: stx6
location: complement(join(107917..111114,111669..111763,112051..112157,112416..112544,112782..112844,112966..113060,113157..113326,114072..114588))
location: region:107917-114588:-1
so has part: feature:114072-114588:-1:exon
so has part: feature:113157-113326:-1:exon
so has part: feature:112966-113060:-1:exon
so has part: feature:112782-112844:-1:exon
so has part: feature:112416-112544:-1:exon
so has part: feature:112051-112157:-1:exon
so has part: feature:111669-111763:-1:exon
so has part: feature:107917-111114:-1:exon

position:114588:-1
position: 114588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114072-114588:-1:exon

position:114072:-1
position: 114072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113157-113326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112966-113060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112782-112844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112416-112544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112051-112157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111669-111763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107917-111114:-1:exon

stx6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: stx6
product: syntaxin 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523176.1
SIO_010081: stx6
subclass of: SO_0000673
so part of: stx6
location: complement(join(111024..111114,111377..111458,111669..111763,112051..112157,112416..112544,112782..112844,112966..113060,113157..113326,118836..118895,130945..130960))
location: region:111024-130960:-1
so has part: feature:130945-130960:-1:exon
so has part: feature:118836-118895:-1:exon
so has part: feature:113157-113326:-1:exon
so has part: feature:112966-113060:-1:exon
so has part: feature:112782-112844:-1:exon
so has part: feature:112416-112544:-1:exon
so has part: feature:112051-112157:-1:exon
so has part: feature:111669-111763:-1:exon
so has part: feature:111377-111458:-1:exon
so has part: feature:111024-111114:-1:exon

position:111024:-1
position: 111024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130945-130960:-1:exon

position:130945:-1
position: 130945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118836-118895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113157-113326:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112966-113060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112782-112844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112416-112544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:112051-112157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:111669-111763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111377-111458:-1:exon

position:111377:-1
position: 111377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111458:-1
position: 111458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:111024-111114:-1:exon

stx6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: stx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-6 isoform X1
translation: MRRGAGAREKVWRRTREVQKAVNTAQGLHQRWSELQQDPGGATKEEIDWTTNELRNSLRSIEWDLEDLDETISIVEANPRKFNLDAVELTKRKAFITSTRQAVKEMKDHMTSPMALALSDKKNRQALLADGGSRGPIWQPGGDKYTRLDQELQTANSQFIEEQQTQQQVIADQQDEQLELVSGTIGVLKNMSQRIGQELDEQAVMLDDFAHEMDNTQSKLDNVMKKLAKVSHMTSDRRQWCAIGVLLAILFVVIILLIVL
SIO_010081: stx6
subclass of: SO_0000673
so part of: stx6
location: complement(join(111038..111114,111669..111763,112051..112157,112416..112544,112782..112844,112966..113060,113157..113326,118836..118882))
location: region:111038-118882:-1
so has part: feature:118836-118882:-1:exon
so has part: feature:113157-113326:-1:exon
so has part: feature:112966-113060:-1:exon
so has part: feature:112782-112844:-1:exon
so has part: feature:112416-112544:-1:exon
so has part: feature:112051-112157:-1:exon
so has part: feature:111669-111763:-1:exon
so has part: feature:111038-111114:-1:exon

XP_026861248.1
type: Protein
SIO_000068: ncbiprotein

position:111038:-1
position: 111038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118882:-1
position: 118882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118836-118882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113157-113326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112966-113060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112782-112844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112416-112544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112051-112157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111669-111763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:111038-111114:-1:exon

stx6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: stx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-6 isoform X2
translation: MSMEDPFFVVKGEVQKAVNTAQGLHQRWSELQQDPGGATKEEIDWTTNELRNSLRSIEWDLEDLDETISIVEANPRKFNLDAVELTKRKAFITSTRQAVKEMKDHMTSPMALALSDKKNRQALLADGGSRGPIWQPGGDKYTRLDQELQTANSQFIEEQQTQQQVIADQQDEQLELVSGTIGVLKNMSQRIGQELDEQAVMLDDFAHEMDNTQSKLDNVMKKLAKVSHMTSDRRQWCAIGVLLAILFVVIILLIVL
SIO_010081: stx6
subclass of: SO_0000673
so part of: stx6
location: complement(join(111038..111114,111669..111763,112051..112157,112416..112544,112782..112844,112966..113060,113157..113326,114072..114106))
location: region:111038-114106:-1
so has part: feature:114072-114106:-1:exon
so has part: feature:113157-113326:-1:exon
so has part: feature:112966-113060:-1:exon
so has part: feature:112782-112844:-1:exon
so has part: feature:112416-112544:-1:exon
so has part: feature:112051-112157:-1:exon
so has part: feature:111669-111763:-1:exon
so has part: feature:111038-111114:-1:exon

XP_026861249.1
type: Protein
SIO_000068: ncbiprotein

position:114106:-1
position: 114106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114072-114106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113157-113326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112966-113060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112782-112844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112416-112544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112051-112157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111669-111763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:111038-111114:-1:exon

stx6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: stx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-6 isoform X3
translation: MRRGAGAREKVWRRTREVQKAVNTAQGLHQRWSELQQDPGGATKEEIDWTTNELRNSLRSIEWDLEDLDETISIVEANPRKFNLDAVELTKRKAFITSTRQAVKEMKDHMTSPMALALSDKKNRQALLADGGSRGPIWQPGGDKYTRLDQELQTANSQFIEEQQTQQQVIADQQDEQLELVSGTIGVLKNMSQRIGQELDEQAVMLDDFAHEMDNTQSKLDNVMKKLAKVSHMTSDPPHVSWSYRLQGKGSLGL
SIO_010081: stx6
subclass of: SO_0000673
so part of: stx6
location: complement(join(111400..111458,111669..111763,112051..112157,112416..112544,112782..112844,112966..113060,113157..113326,118836..118882))
location: region:111400-118882:-1
so has part: feature:118836-118882:-1:exon
so has part: feature:113157-113326:-1:exon
so has part: feature:112966-113060:-1:exon
so has part: feature:112782-112844:-1:exon
so has part: feature:112416-112544:-1:exon
so has part: feature:112051-112157:-1:exon
so has part: feature:111669-111763:-1:exon
so has part: feature:111400-111458:-1:exon

XP_035379069.1
type: Protein
SIO_000068: ncbiprotein

position:111400:-1
position: 111400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118836-118882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113157-113326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112966-113060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112782-112844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112416-112544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112051-112157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111669-111763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:111400-111458:-1:exon

ier5
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: ier5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 115864..117675
location: region:115864-117675:1
so has part: feature:115864-117675:1:exon
subclass of: SO_0000010

113574491
type: Gene
SIO_000068: ncbigene

position:115864:1
position: 115864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117675:1
position: 117675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115864-117675:1:exon

ier5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ier5
product: immediate early response 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027005446.2
SIO_010081: ier5
subclass of: SO_0000673
so part of: ier5
location: 115864..117675
location: region:115864-117675:1
so has part: feature:115864-117675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115864-117675:1:exon

ier5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ier5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immediate early response gene 5 protein
translation: MEYKVEAHRIMSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDYYAGVCLNAQHIEAKEWELMDADREKLIPASEAAQPSSADCGVSEAAQPGQTRTTGGAQLCLKRHVGAEDGRASRLQEKDGDSLDPSDVAVTSPVSPAISETQCGSSDCETDADAAVTEGDSRQPPKDHACSHRKRSAEETGVSETPVKRTKVTPNAIVANNEIEEGEEMDTSNVSNLITIFGSGFSGLLSKDSAKSESETDDSDSGSGQICCEQMLKNLNPWTTAIVAF
SIO_010081: ier5
subclass of: SO_0000673
so part of: ier5
location: 116250..117092
location: region:116250-117092:1
so has part: feature:116250-117092:1:exon

XP_026861247.2
type: Protein
SIO_000068: ncbiprotein

position:116250:1
position: 116250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117092:1
position: 117092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116250-117092:1:exon

tal1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: tal1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134217..140451
location: region:134217-140451:1
so has part: feature:134217-140451:1:exon
subclass of: SO_0000010

113574473
type: Gene
SIO_000068: ncbigene

position:134217:1
position: 134217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140451:1
position: 140451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134217-140451:1:exon

tal1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tal1
product: T-cell acute lymphocytic leukemia 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027005421.2
SIO_010081: tal1
subclass of: SO_0000673
so part of: tal1
location: join(134217..134302,136171..136802,137298..137389,138807..140451)
location: region:134217-140451:1
so has part: feature:134217-134302:1:exon
so has part: feature:136171-136802:1:exon
so has part: feature:137298-137389:1:exon
so has part: feature:138807-140451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134217-134302:1:exon

position:134302:1
position: 134302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136171-136802:1:exon

position:136171:1
position: 136171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136802:1
position: 136802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137298-137389:1:exon

position:137298:1
position: 137298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137389:1
position: 137389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:138807-140451:1:exon

position:138807:1
position: 138807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tal1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tal1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell acute lymphocytic leukemia protein 1 homolog
translation: MMEKLKSEQPQVSPSTQECGSPGHKTSASSATLTPVEEGEAHGKQEGTTTSESMERKRRGEHLPEDYCNGTIILNGVTKETAYHASELKKEVPVIELGRRGGSADIKGRELKADISHKVQTTELCRPPIPLPLPPRDPLSETRMVQLSPPALPLPARAMLYSNMAQPLATINSGFAGDHEQYGMYPSNRVKRRPAPYELEISDGSQPKIVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQDDMMGGEAGSRAREGRDASLVRDDLLQEVLSPNSSCGSLLDGEGSPESFLEEQDSSVESRPTGRGLHHSAVPLDGSNQR
SIO_010081: tal1
subclass of: SO_0000673
so part of: tal1
location: join(136285..136802,137298..137389,138807..139243)
location: region:136285-139243:1
so has part: feature:136285-136802:1:exon
so has part: feature:137298-137389:1:exon
so has part: feature:138807-139243:1:exon

XP_026861222.2
type: Protein
SIO_000068: ncbiprotein

position:136285:1
position: 136285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139243:1
position: 139243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136285-136802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137298-137389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138807-139243:1:exon

pdzk1ip1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: pdzk1ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 144066..148319
location: region:144066-148319:1
so has part: feature:144066-148319:1:exon
subclass of: SO_0000010

113574526
type: Gene
SIO_000068: ncbigene

position:144066:1
position: 144066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148319:1
position: 148319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144066-148319:1:exon

pdzk1ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: pdzk1ip1
product: PDZK1 interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027005520.2
SIO_010081: pdzk1ip1
subclass of: SO_0000673
so part of: pdzk1ip1
location: join(144066..144285,144648..144762,145044..145127,145288..145359,145458..148319)
location: region:144066-148319:1
so has part: feature:144066-144285:1:exon
so has part: feature:144648-144762:1:exon
so has part: feature:145044-145127:1:exon
so has part: feature:145288-145359:1:exon
so has part: feature:145458-148319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144066-144285:1:exon

position:144285:1
position: 144285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144648-144762:1:exon

position:144648:1
position: 144648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144762:1
position: 144762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145044-145127:1:exon

position:145044:1
position: 145044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145127:1
position: 145127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145288-145359:1:exon

position:145288:1
position: 145288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145359:1
position: 145359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145458-148319:1:exon

position:145458:1
position: 145458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pdzk1ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: pdzk1ip1
product: PDZK1 interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027005517.2
SIO_010081: pdzk1ip1
subclass of: SO_0000673
so part of: pdzk1ip1
location: join(144067..144285,144648..144762,145044..145127,145285..145359,145458..148319)
location: region:144067-148319:1
so has part: feature:144067-144285:1:exon
so has part: feature:144648-144762:1:exon
so has part: feature:145044-145127:1:exon
so has part: feature:145285-145359:1:exon
so has part: feature:145458-148319:1:exon

position:144067:1
position: 144067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144067-144285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144648-144762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145044-145127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145285-145359:1:exon

position:145285:1
position: 145285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145458-148319:1:exon

pdzk1ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: pdzk1ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZK1-interacting protein 1 isoform X1
translation: MGKEVTALHWFLLTLGAVTAQAEISKQALPNWLTGIIAVAVFLFLVFIAFLVNKAWCDDSSQEVKVEVTCNEYAMTNGANYETNLDSVRSSEHYEAYENVIVHKTDEKITVM
SIO_010081: pdzk1ip1
subclass of: SO_0000673
so part of: pdzk1ip1
location: join(144219..144285,144648..144762,145044..145127,145285..145357)
location: region:144219-145357:1
so has part: feature:144219-144285:1:exon
so has part: feature:144648-144762:1:exon
so has part: feature:145044-145127:1:exon
so has part: feature:145285-145357:1:exon

XP_026861318.1
type: Protein
SIO_000068: ncbiprotein

position:144219:1
position: 144219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145357:1
position: 145357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144219-144285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144648-144762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145044-145127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145285-145357:1:exon

pdzk1ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: pdzk1ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZK1-interacting protein 1 isoform X2
translation: MGKEVTALHWFLLTLGAVTAQAEISKQALPNWLTGIIAVAVFLFLVFIAFLVNKAWCDDSSQEVKVEVTCNEYAMTNGANYETNLDSVSSEHYEAYENVIVHKTDEKITVM
SIO_010081: pdzk1ip1
subclass of: SO_0000673
so part of: pdzk1ip1
location: join(144219..144285,144648..144762,145044..145127,145288..145357)
location: region:144219-145357:1
so has part: feature:144219-144285:1:exon
so has part: feature:144648-144762:1:exon
so has part: feature:145044-145127:1:exon
so has part: feature:145288-145357:1:exon

XP_026861321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144219-144285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144648-144762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145044-145127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145288-145357:1:exon

patj
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: patj
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(146799..235565)
location: region:146799-235565:-1
so has part: feature:146799-235565:-1:exon
subclass of: SO_0000010

113574468
type: Gene
SIO_000068: ncbigene

position:146799:-1
position: 146799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235565:-1
position: 235565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146799-235565:-1:exon

patj
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: patj
product: PATJ crumbs cell polarity complex component, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523400.1
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(146799..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,193903..193962,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208742,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234359,235267..235565))
location: region:146799-235565:-1
so has part: feature:235267-235565:-1:exon
so has part: feature:234321-234359:-1:exon
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 4
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urn:…
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urn:…
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
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SIO_000300: 13
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SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 28
SIO_000628: feature:191435-191531:-1:exon

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SIO_000300: 29
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urn:…
SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 33
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SIO_000300: 34
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SIO_000300: 35
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SIO_000300: 36
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SIO_000300: 37
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SIO_000300: 38
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SIO_000300: 39
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SIO_000300: 40
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SIO_000300: 41
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SIO_000300: 42
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SIO_000300: 43
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SIO_000300: 44
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SIO_000300: 45
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SIO_000300: 46
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urn:…
SIO_000300: 47
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patj
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: patj
product: PATJ crumbs cell polarity complex component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523399.1
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(146799..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,193903..193962,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208739,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234359,234503..234564))
location: region:146799-234564:-1
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position:234564:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:234503-234564:-1:exon

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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:234321-234359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234060-234238:-1:exon

urn:…
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SIO_000628: feature:232402-232541:-1:exon

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SIO_000300: 6
SIO_000628: feature:231998-232178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227481-227609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225398-225631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224879-224981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224663-224751:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215812-215953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214857-214985:-1:exon

urn:…
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SIO_000628: feature:212760-212839:-1:exon

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SIO_000628: feature:211162-211218:-1:exon

urn:…
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SIO_000628: feature:210913-211047:-1:exon

urn:…
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SIO_000628: feature:209116-209289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208542-208739:-1:exon

position:208739:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:201878-202087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201049-201141:-1:exon

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SIO_000628: feature:199114-199392:-1:exon

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SIO_000628: feature:198041-198134:-1:exon

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urn:…
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SIO_000300: 46
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urn:…
SIO_000300: 47
SIO_000628: feature:146799-149239:-1:exon

patj
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: patj
product: PATJ crumbs cell polarity complex component, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035523401.1
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(146799..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208742,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234359,234503..234564))
location: region:146799-234564:-1
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so has part: feature:198739-198826:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 43
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SIO_000628: feature:151034-151137:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:149923-150046:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:146799-149239:-1:exon

patj
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: patj
product: PATJ crumbs cell polarity complex component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523398.1
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(146799..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,193903..193962,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208742,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234359,234503..234564))
location: region:146799-234564:-1
so has part: feature:234503-234564:-1:exon
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urn:…
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urn:…
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urn:…
SIO_000300: 47
SIO_000628: feature:146799-149239:-1:exon

patj
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: patj
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inaD-like protein isoform X2
translation: MCSTCENVTTFTSTGFKGRAMYENVPTVTAVERQQVLQALERLQSKLVQREEWTHSDRLGALKEALQSPLLGRILTLQHSVKQLKDQLNSMPPDASSEFSFSRKGQLIVSASRPGSSLSSVASNGTTVSTVSSEQLQRWLQAAAKGRKMEHVNLSRPVSGGLGFSVVGLRPDGVGAHGVFIKQVQPGSIAARDGRLQENDQILAINGIALDQSVTQQQALALLQQQKDRVELVVVRDTAAKLGLLPSGSVHTDKWGHVEEIELMNDGSGLGFGIVGGKTTGVIVRTIVPNTVADKDGRLRTGDHILRIGETLTRGLSSEQVVQVLQACGSCVRMLIARDPLGEVQPPAPPPPAPATAPITSLPPPPARRTSRTLNLEGYEIHEVSLKKKEGQSLGISIIGCNKSNSEDSVGAHVKSVVPGSAAEQSGNIMVHDRIIALNGVSLQGFTSQEVLDVMRQTGHIVHLTLVRKITTFKKSTMEKSLDKVQRESSRVSLRRSAEIKVRADVQTPSVMEPVESALTAIKHSGRVREPTPLTEMELHSKWEQALGPRYDVMVVELDPVIEDDAELQKYSKLLPIHTMRLGVELDSFDGHHYISTVAPEGPVAKHGLLRPEDELLEVNGVQLYGKSRREAVAFLREVPPPFTLVCCRHLTEEGTEYQPDAEEWCSSSPTASLQETPVIQQEVAEQRKVSEQSRPVREEERRESGDEEDEDGELALWAPEVQVLELEKGDRGLGFSILDYQDPLDTTRSVIVIRSLVAKGVAESHGGLLPGDQLVFVNDTHLDTCTLAQAVEVLKAALPGKVYLGIRKPLGAEERSSVEQISQEHQEELESPSTHAQLPVPKGFGNGSILLEDLDDEPELILDEMPRYASPLITTDRLPGLEREMAVDEEKEEERKGLSLDRDSTVSYSKESPSREDPAVSKPHQALSLHVLQQQEKDEDALVQDEEDFLAELVLSTKPPEHPFSEAARSWVEVAESDSDSRNGGSELTLTDTDTESSQLPSSARRKRRSQGFPVTREAHGNLPEREEGEGEETPIFSHWGPPRRVEVWPEPGESLGISIVGGRTVIKRLKNGEELKGIFIKQVLPEGPAGRTRELKTGDKILQVSEVDLQNASHEEAVQAIKAAPSPVVFIVQSLSSTPRPVSVTASSIRQHKAKRKGMPKAGPRGAPPPMRLPPPYRPPSLVQDDDPEHTTEGIRQKYGELVGDLLLVELEKDGQGLGLSLAGNRDRSCINIFVVGIAPGGPAGRDGRIRIGDELLEINNQVLYGRSHQNASAIIKSAAAKVKLVLLRNEDAISQMAVAPLPPQPSFFSPSESLPAPPVLTEECQLQERAGLGQCPPEMPLPQEQTSEVTAVSSGVQESTEKDLQEGESASKKLKSEGGGGGRETEREELSMPEVEKTAGLRISCKPPGDSVDAVVPLLTVSPACTSPDPGYTNRDPATCPIVPGQETLIEISKGRSGLGLSIVGGKDTQLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSVTHEDAIAALRQTPAKVRLTVLRDEAQYRDEENLDVFTVELQRKSGRGLGLSIVGKRNGTGVFISEVVKGGAADVDGRLMQGDQILSVNGDDMRQASQETVAAVLKCARGMVHLELGRLKAASWISSRRTSQGSQSHGSHMTNNNTAAPTAPPPSTARRPAQLETNSKNSGPEAGVRTVEITRGPTDALGISIAGGRGSPLGDIPIFIAMIQANGVAARTHRLKVGDRIVSINSHSLEGLTHGEVVSMLKNAYGSIVLQVIADTNINAIASQVESMSSSSTLSTNPETQTTETETPKPKSITLEKGSEGLGFSIVGGFGSPHGDLPIYVKTVFSKGAAAVDGRLKRGDQILSVNGESLESVTHEQAVAILKKQRGLVTLAVLS
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(149093..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,193903..193962,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208739,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234359,234503..234545))
location: region:149093-234545:-1
so has part: feature:234503-234545:-1:exon
so has part: feature:234321-234359:-1:exon
so has part: feature:234060-234238:-1:exon
so has part: feature:232882-233055:-1:exon
so has part: feature:232402-232541:-1:exon
so has part: feature:231998-232178:-1:exon
so has part: feature:227481-227609:-1:exon
so has part: feature:225398-225631:-1:exon
so has part: feature:224879-224981:-1:exon
so has part: feature:224663-224751:-1:exon
so has part: feature:215812-215953:-1:exon
so has part: feature:214857-214985:-1:exon
so has part: feature:212760-212839:-1:exon
so has part: feature:211162-211218:-1:exon
so has part: feature:210913-211047:-1:exon
so has part: feature:209116-209289:-1:exon
so has part: feature:208542-208739:-1:exon
so has part: feature:201878-202087:-1:exon
so has part: feature:201049-201141:-1:exon
so has part: feature:199114-199392:-1:exon
so has part: feature:198739-198826:-1:exon
so has part: feature:198041-198134:-1:exon
so has part: feature:196665-196739:-1:exon
so has part: feature:196408-196479:-1:exon
so has part: feature:195928-196105:-1:exon
so has part: feature:195609-195719:-1:exon
so has part: feature:193903-193962:-1:exon
so has part: feature:191435-191531:-1:exon
so has part: feature:169115-169311:-1:exon
so has part: feature:166943-167034:-1:exon
so has part: feature:161330-161402:-1:exon
so has part: feature:160733-160825:-1:exon
so has part: feature:160088-160174:-1:exon
so has part: feature:159746-159820:-1:exon
so has part: feature:159370-159484:-1:exon
so has part: feature:158827-158933:-1:exon
so has part: feature:158036-158119:-1:exon
so has part: feature:157212-157405:-1:exon
so has part: feature:156772-156919:-1:exon
so has part: feature:155891-155977:-1:exon
so has part: feature:155431-155536:-1:exon
so has part: feature:154403-154440:-1:exon
so has part: feature:154181-154303:-1:exon
so has part: feature:153797-153901:-1:exon
so has part: feature:151034-151137:-1:exon
so has part: feature:149923-150046:-1:exon
so has part: feature:149093-149239:-1:exon

XP_035379292.1
type: Protein
SIO_000068: ncbiprotein

position:149093:-1
position: 149093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234545:-1
position: 234545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234503-234545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234321-234359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234060-234238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232882-233055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232402-232541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231998-232178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227481-227609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225398-225631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224879-224981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224663-224751:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215812-215953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214857-214985:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212760-212839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:211162-211218:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:210913-211047:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:209116-209289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208542-208739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201878-202087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201049-201141:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:199114-199392:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:198739-198826:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:198041-198134:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:196665-196739:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:196408-196479:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:195928-196105:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:195609-195719:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:193903-193962:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:191435-191531:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:169115-169311:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:166943-167034:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:161330-161402:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:160733-160825:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:160088-160174:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:159746-159820:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:159370-159484:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:158827-158933:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:158036-158119:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:157212-157405:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:156772-156919:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:155891-155977:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:155431-155536:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:154403-154440:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:154181-154303:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:153797-153901:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:151034-151137:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:149923-150046:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:149093-149239:-1:exon

patj
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: patj
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inaD-like protein isoform X4
translation: MCSTCENVTTFTSTGFKGRAMYENVPTVTAVERQQVLQALERLQSKLVQREEWTHSDRLGALKEALQSPLLGRILTLQHSVKQLKDQLNSMPPDASSEFSFSRKGQLIVSASRPGSSLSSVASNGTTVSTVSSEQLQRWLQAAAKGRKMEHVNLSRPVSGGLGFSVVGLRPDGVGAHGVFIKQVQPGSIAARDGRLQENDQILAINGIALDQSVTQQQALALLQQQKDRVELVVVRDTAAKLGLLPSGSVHTDKWGHVEEIELMNDGSGLGFGIVGGKTTGVIVRTIVPNTVADKDGRLRTGDHILRIGETLTRGLSSEQVVQVLQACGSCVRMLIARDPLGEVQPPAPPPPAPATAPITSLPPPPARRTSRTLNLEGYEIHEVSLKKKEGQSLGISIIGCNKSNSEDSVGAHVKSVVPGSAAEQSGNIMVHDRIIALNGVSLQGFTSQEVLDVMRQTGHIVHLTLVRKITTFKKSTMEKSLDKVQRESSRVSLRRSAEIKVRADVQTPSVMEPVESALTAIKHSGRVREPTPLTEMELHSKWEQALGPRYDVMVVELDPVIEDDAELQKYSKLLPIHTMRLGVELDSFDGHHYISTVAPEGPVAKHGLLRPEDELLEVNGVQLYGKSRREAVAFLREVPPPFTLVCCRHLTEEGTEYQPDAEEWCSSSPTASLQEQTPVIQQEVAEQRKVSEQSRPVREEERRESGDEEDEDGELALWAPEVQVLELEKGDRGLGFSILDYQDPLDTTRSVIVIRSLVAKGVAESHGGLLPGDQLVFVNDTHLDTCTLAQAVEVLKAALPGKVYLGIRKPLGAEERSSVEQISQEHQEELESPSTHAQLPVPKGFGNGSILLEDLDDEPELILDEMPRYASPLITTDRLPGLEREMAVDEEKEEERKGLSLDRDSTVSYSKESPSREDPAVSKPHQALSLHVLQQQEKDEDALVQDEEDFLAELVLSTKPPEHPFSEAARSWVEVAESDSDSRNGGSELTLTDTDTESSQLPSSARRKRRSQGFPVTREAHGNLPEREEGEGEETPIFSHWGPPRRVEVWPEPGESLGISIVGGRTVIKRLKNGEELKGIFIKQVLPEGPAGRTRELKTGDKILQVSEVDLQNASHEEAVQAIKAAPSPVVFIVQSLSSTPRKAGPRGAPPPMRLPPPYRPPSLVQDDDPEHTTEGIRQKYGELVGDLLLVELEKDGQGLGLSLAGNRDRSCINIFVVGIAPGGPAGRDGRIRIGDELLEINNQVLYGRSHQNASAIIKSAAAKVKLVLLRNEDAISQMAVAPLPPQPSFFSPSESLPAPPVLTEECQLQERAGLGQCPPEMPLPQEQTSEVTAVSSGVQESTEKDLQEGESASKKLKSEGGGGGRETEREELSMPEVEKTAGLRISCKPPGDSVDAVVPLLTVSPACTSPDPGYTNRDPATCPIVPGQETLIEISKGRSGLGLSIVGGKDTQLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSVTHEDAIAALRQTPAKVRLTVLRDEAQYRDEENLDVFTVELQRKSGRGLGLSIVGKRNGTGVFISEVVKGGAADVDGRLMQGDQILSVNGDDMRQASQETVAAVLKCARGMVHLELGRLKAASWISSRRTSQGSQSHGSHMTNNNTAAPTAPPPSTARRPAQLETNSKNSGPEAGVRTVEITRGPTDALGISIAGGRGSPLGDIPIFIAMIQANGVAARTHRLKVGDRIVSINSHSLEGLTHGEVVSMLKNAYGSIVLQVIADTNINAIASQVESMSSSSTLSTNPETQTTETETPKPKSITLEKGSEGLGFSIVGGFGSPHGDLPIYVKTVFSKGAAAVDGRLKRGDQILSVNGESLESVTHEQAVAILKKQRGLVTLAVLS
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(149093..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208742,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234359,234503..234545))
location: region:149093-234545:-1
so has part: feature:234503-234545:-1:exon
so has part: feature:234321-234359:-1:exon
so has part: feature:234060-234238:-1:exon
so has part: feature:232882-233055:-1:exon
so has part: feature:232402-232541:-1:exon
so has part: feature:231998-232178:-1:exon
so has part: feature:227481-227609:-1:exon
so has part: feature:225398-225631:-1:exon
so has part: feature:224879-224981:-1:exon
so has part: feature:224663-224751:-1:exon
so has part: feature:215812-215953:-1:exon
so has part: feature:214857-214985:-1:exon
so has part: feature:212760-212839:-1:exon
so has part: feature:211162-211218:-1:exon
so has part: feature:210913-211047:-1:exon
so has part: feature:209116-209289:-1:exon
so has part: feature:208542-208742:-1:exon
so has part: feature:201878-202087:-1:exon
so has part: feature:201049-201141:-1:exon
so has part: feature:199114-199392:-1:exon
so has part: feature:198739-198826:-1:exon
so has part: feature:198041-198134:-1:exon
so has part: feature:196665-196739:-1:exon
so has part: feature:196408-196479:-1:exon
so has part: feature:195928-196105:-1:exon
so has part: feature:195609-195719:-1:exon
so has part: feature:191435-191531:-1:exon
so has part: feature:169115-169311:-1:exon
so has part: feature:166943-167034:-1:exon
so has part: feature:161330-161402:-1:exon
so has part: feature:160733-160825:-1:exon
so has part: feature:160088-160174:-1:exon
so has part: feature:159746-159820:-1:exon
so has part: feature:159370-159484:-1:exon
so has part: feature:158827-158933:-1:exon
so has part: feature:158036-158119:-1:exon
so has part: feature:157212-157405:-1:exon
so has part: feature:156772-156919:-1:exon
so has part: feature:155891-155977:-1:exon
so has part: feature:155431-155536:-1:exon
so has part: feature:154403-154440:-1:exon
so has part: feature:154181-154303:-1:exon
so has part: feature:153797-153901:-1:exon
so has part: feature:151034-151137:-1:exon
so has part: feature:149923-150046:-1:exon
so has part: feature:149093-149239:-1:exon

XP_035379294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234503-234545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234321-234359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234060-234238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232882-233055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232402-232541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231998-232178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227481-227609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225398-225631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224879-224981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224663-224751:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215812-215953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214857-214985:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212760-212839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:211162-211218:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:210913-211047:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:209116-209289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208542-208742:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201878-202087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201049-201141:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:199114-199392:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:198739-198826:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:198041-198134:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:196665-196739:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:196408-196479:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:195928-196105:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:195609-195719:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:191435-191531:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:169115-169311:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:166943-167034:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:161330-161402:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:160733-160825:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:160088-160174:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:159746-159820:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:159370-159484:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:158827-158933:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:158036-158119:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:157212-157405:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:156772-156919:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:155891-155977:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:155431-155536:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:154403-154440:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:154181-154303:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:153797-153901:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:151034-151137:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:149923-150046:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:149093-149239:-1:exon

patj
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: patj
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inaD-like protein isoform X1
translation: MCSTCENVTTFTSTGFKGRAMYENVPTVTAVERQQVLQALERLQSKLVQREEWTHSDRLGALKEALQSPLLGRILTLQHSVKQLKDQLNSMPPDASSEFSFSRKGQLIVSASRPGSSLSSVASNGTTVSTVSSEQLQRWLQAAAKGRKMEHVNLSRPVSGGLGFSVVGLRPDGVGAHGVFIKQVQPGSIAARDGRLQENDQILAINGIALDQSVTQQQALALLQQQKDRVELVVVRDTAAKLGLLPSGSVHTDKWGHVEEIELMNDGSGLGFGIVGGKTTGVIVRTIVPNTVADKDGRLRTGDHILRIGETLTRGLSSEQVVQVLQACGSCVRMLIARDPLGEVQPPAPPPPAPATAPITSLPPPPARRTSRTLNLEGYEIHEVSLKKKEGQSLGISIIGCNKSNSEDSVGAHVKSVVPGSAAEQSGNIMVHDRIIALNGVSLQGFTSQEVLDVMRQTGHIVHLTLVRKITTFKKSTMEKSLDKVQRESSRVSLRRSAEIKVRADVQTPSVMEPVESALTAIKHSGRVREPTPLTEMELHSKWEQALGPRYDVMVVELDPVIEDDAELQKYSKLLPIHTMRLGVELDSFDGHHYISTVAPEGPVAKHGLLRPEDELLEVNGVQLYGKSRREAVAFLREVPPPFTLVCCRHLTEEGTEYQPDAEEWCSSSPTASLQEQTPVIQQEVAEQRKVSEQSRPVREEERRESGDEEDEDGELALWAPEVQVLELEKGDRGLGFSILDYQDPLDTTRSVIVIRSLVAKGVAESHGGLLPGDQLVFVNDTHLDTCTLAQAVEVLKAALPGKVYLGIRKPLGAEERSSVEQISQEHQEELESPSTHAQLPVPKGFGNGSILLEDLDDEPELILDEMPRYASPLITTDRLPGLEREMAVDEEKEEERKGLSLDRDSTVSYSKESPSREDPAVSKPHQALSLHVLQQQEKDEDALVQDEEDFLAELVLSTKPPEHPFSEAARSWVEVAESDSDSRNGGSELTLTDTDTESSQLPSSARRKRRSQGFPVTREAHGNLPEREEGEGEETPIFSHWGPPRRVEVWPEPGESLGISIVGGRTVIKRLKNGEELKGIFIKQVLPEGPAGRTRELKTGDKILQVSEVDLQNASHEEAVQAIKAAPSPVVFIVQSLSSTPRPVSVTASSIRQHKAKRKGMPKAGPRGAPPPMRLPPPYRPPSLVQDDDPEHTTEGIRQKYGELVGDLLLVELEKDGQGLGLSLAGNRDRSCINIFVVGIAPGGPAGRDGRIRIGDELLEINNQVLYGRSHQNASAIIKSAAAKVKLVLLRNEDAISQMAVAPLPPQPSFFSPSESLPAPPVLTEECQLQERAGLGQCPPEMPLPQEQTSEVTAVSSGVQESTEKDLQEGESASKKLKSEGGGGGRETEREELSMPEVEKTAGLRISCKPPGDSVDAVVPLLTVSPACTSPDPGYTNRDPATCPIVPGQETLIEISKGRSGLGLSIVGGKDTQLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSVTHEDAIAALRQTPAKVRLTVLRDEAQYRDEENLDVFTVELQRKSGRGLGLSIVGKRNGTGVFISEVVKGGAADVDGRLMQGDQILSVNGDDMRQASQETVAAVLKCARGMVHLELGRLKAASWISSRRTSQGSQSHGSHMTNNNTAAPTAPPPSTARRPAQLETNSKNSGPEAGVRTVEITRGPTDALGISIAGGRGSPLGDIPIFIAMIQANGVAARTHRLKVGDRIVSINSHSLEGLTHGEVVSMLKNAYGSIVLQVIADTNINAIASQVESMSSSSTLSTNPETQTTETETPKPKSITLEKGSEGLGFSIVGGFGSPHGDLPIYVKTVFSKGAAAVDGRLKRGDQILSVNGESLESVTHEQAVAILKKQRGLVTLAVLS
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(149093..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,193903..193962,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208742,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234359,234503..234545))
location: region:149093-234545:-1
so has part: feature:234503-234545:-1:exon
so has part: feature:234321-234359:-1:exon
so has part: feature:234060-234238:-1:exon
so has part: feature:232882-233055:-1:exon
so has part: feature:232402-232541:-1:exon
so has part: feature:231998-232178:-1:exon
so has part: feature:227481-227609:-1:exon
so has part: feature:225398-225631:-1:exon
so has part: feature:224879-224981:-1:exon
so has part: feature:224663-224751:-1:exon
so has part: feature:215812-215953:-1:exon
so has part: feature:214857-214985:-1:exon
so has part: feature:212760-212839:-1:exon
so has part: feature:211162-211218:-1:exon
so has part: feature:210913-211047:-1:exon
so has part: feature:209116-209289:-1:exon
so has part: feature:208542-208742:-1:exon
so has part: feature:201878-202087:-1:exon
so has part: feature:201049-201141:-1:exon
so has part: feature:199114-199392:-1:exon
so has part: feature:198739-198826:-1:exon
so has part: feature:198041-198134:-1:exon
so has part: feature:196665-196739:-1:exon
so has part: feature:196408-196479:-1:exon
so has part: feature:195928-196105:-1:exon
so has part: feature:195609-195719:-1:exon
so has part: feature:193903-193962:-1:exon
so has part: feature:191435-191531:-1:exon
so has part: feature:169115-169311:-1:exon
so has part: feature:166943-167034:-1:exon
so has part: feature:161330-161402:-1:exon
so has part: feature:160733-160825:-1:exon
so has part: feature:160088-160174:-1:exon
so has part: feature:159746-159820:-1:exon
so has part: feature:159370-159484:-1:exon
so has part: feature:158827-158933:-1:exon
so has part: feature:158036-158119:-1:exon
so has part: feature:157212-157405:-1:exon
so has part: feature:156772-156919:-1:exon
so has part: feature:155891-155977:-1:exon
so has part: feature:155431-155536:-1:exon
so has part: feature:154403-154440:-1:exon
so has part: feature:154181-154303:-1:exon
so has part: feature:153797-153901:-1:exon
so has part: feature:151034-151137:-1:exon
so has part: feature:149923-150046:-1:exon
so has part: feature:149093-149239:-1:exon

XP_035379291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234503-234545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234321-234359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234060-234238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232882-233055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232402-232541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231998-232178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227481-227609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225398-225631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224879-224981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224663-224751:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215812-215953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214857-214985:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212760-212839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:211162-211218:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:210913-211047:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:209116-209289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208542-208742:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201878-202087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201049-201141:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:199114-199392:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:198739-198826:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:198041-198134:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:196665-196739:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:196408-196479:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:195928-196105:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:195609-195719:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:193903-193962:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:191435-191531:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:169115-169311:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:166943-167034:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:161330-161402:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:160733-160825:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:160088-160174:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:159746-159820:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:159370-159484:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:158827-158933:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:158036-158119:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:157212-157405:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:156772-156919:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:155891-155977:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:155431-155536:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:154403-154440:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:154181-154303:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:153797-153901:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:151034-151137:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:149923-150046:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:149093-149239:-1:exon

patj
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: patj
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inaD-like protein isoform X3
translation: MYENVPTVTAVERQQVLQALERLQSKLVQREEWTHSDRLGALKEALQSPLLGRILTLQHSVKQLKDQLNSMPPDASSEFSFSRKGQLIVSASRPGSSLSSVASNGTTVSTVSSEQLQRWLQAAAKGRKMEHVNLSRPVSGGLGFSVVGLRPDGVGAHGVFIKQVQPGSIAARDGRLQENDQILAINGIALDQSVTQQQALALLQQQKDRVELVVVRDTAAKLGLLPSGSVHTDKWGHVEEIELMNDGSGLGFGIVGGKTTGVIVRTIVPNTVADKDGRLRTGDHILRIGETLTRGLSSEQVVQVLQACGSCVRMLIARDPLGEVQPPAPPPPAPATAPITSLPPPPARRTSRTLNLEGYEIHEVSLKKKEGQSLGISIIGCNKSNSEDSVGAHVKSVVPGSAAEQSGNIMVHDRIIALNGVSLQGFTSQEVLDVMRQTGHIVHLTLVRKITTFKKSTMEKSLDKVQRESSRVSLRRSAEIKVRADVQTPSVMEPVESALTAIKHSGRVREPTPLTEMELHSKWEQALGPRYDVMVVELDPVIEDDAELQKYSKLLPIHTMRLGVELDSFDGHHYISTVAPEGPVAKHGLLRPEDELLEVNGVQLYGKSRREAVAFLREVPPPFTLVCCRHLTEEGTEYQPDAEEWCSSSPTASLQEQTPVIQQEVAEQRKVSEQSRPVREEERRESGDEEDEDGELALWAPEVQVLELEKGDRGLGFSILDYQDPLDTTRSVIVIRSLVAKGVAESHGGLLPGDQLVFVNDTHLDTCTLAQAVEVLKAALPGKVYLGIRKPLGAEERSSVEQISQEHQEELESPSTHAQLPVPKGFGNGSILLEDLDDEPELILDEMPRYASPLITTDRLPGLEREMAVDEEKEEERKGLSLDRDSTVSYSKESPSREDPAVSKPHQALSLHVLQQQEKDEDALVQDEEDFLAELVLSTKPPEHPFSEAARSWVEVAESDSDSRNGGSELTLTDTDTESSQLPSSARRKRRSQGFPVTREAHGNLPEREEGEGEETPIFSHWGPPRRVEVWPEPGESLGISIVGGRTVIKRLKNGEELKGIFIKQVLPEGPAGRTRELKTGDKILQVSEVDLQNASHEEAVQAIKAAPSPVVFIVQSLSSTPRPVSVTASSIRQHKAKRKGMPKAGPRGAPPPMRLPPPYRPPSLVQDDDPEHTTEGIRQKYGELVGDLLLVELEKDGQGLGLSLAGNRDRSCINIFVVGIAPGGPAGRDGRIRIGDELLEINNQVLYGRSHQNASAIIKSAAAKVKLVLLRNEDAISQMAVAPLPPQPSFFSPSESLPAPPVLTEECQLQERAGLGQCPPEMPLPQEQTSEVTAVSSGVQESTEKDLQEGESASKKLKSEGGGGGRETEREELSMPEVEKTAGLRISCKPPGDSVDAVVPLLTVSPACTSPDPGYTNRDPATCPIVPGQETLIEISKGRSGLGLSIVGGKDTQLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSVTHEDAIAALRQTPAKVRLTVLRDEAQYRDEENLDVFTVELQRKSGRGLGLSIVGKRNGTGVFISEVVKGGAADVDGRLMQGDQILSVNGDDMRQASQETVAAVLKCARGMVHLELGRLKAASWISSRRTSQGSQSHGSHMTNNNTAAPTAPPPSTARRPAQLETNSKNSGPEAGVRTVEITRGPTDALGISIAGGRGSPLGDIPIFIAMIQANGVAARTHRLKVGDRIVSINSHSLEGLTHGEVVSMLKNAYGSIVLQVIADTNINAIASQVESMSSSSTLSTNPETQTTETETPKPKSITLEKGSEGLGFSIVGGFGSPHGDLPIYVKTVFSKGAAAVDGRLKRGDQILSVNGESLESVTHEQAVAILKKQRGLVTLAVLS
SIO_010081: patj
subclass of: SO_0000673
so part of: patj
location: complement(join(149093..149239,149923..150046,151034..151137,153797..153901,154181..154303,154403..154440,155431..155536,155891..155977,156772..156919,157212..157405,158036..158119,158827..158933,159370..159484,159746..159820,160088..160174,160733..160825,161330..161402,166943..167034,169115..169311,191435..191531,193903..193962,195609..195719,195928..196105,196408..196479,196665..196739,198041..198134,198739..198826,199114..199392,201049..201141,201878..202087,208542..208742,209116..209289,210913..211047,211162..211218,212760..212839,214857..214985,215812..215953,224663..224751,224879..224981,225398..225631,227481..227609,231998..232178,232402..232541,232882..233055,234060..234238,234321..234342))
location: region:149093-234342:-1
so has part: feature:234321-234342:-1:exon
so has part: feature:234060-234238:-1:exon
so has part: feature:232882-233055:-1:exon
so has part: feature:232402-232541:-1:exon
so has part: feature:231998-232178:-1:exon
so has part: feature:227481-227609:-1:exon
so has part: feature:225398-225631:-1:exon
so has part: feature:224879-224981:-1:exon
so has part: feature:224663-224751:-1:exon
so has part: feature:215812-215953:-1:exon
so has part: feature:214857-214985:-1:exon
so has part: feature:212760-212839:-1:exon
so has part: feature:211162-211218:-1:exon
so has part: feature:210913-211047:-1:exon
so has part: feature:209116-209289:-1:exon
so has part: feature:208542-208742:-1:exon
so has part: feature:201878-202087:-1:exon
so has part: feature:201049-201141:-1:exon
so has part: feature:199114-199392:-1:exon
so has part: feature:198739-198826:-1:exon
so has part: feature:198041-198134:-1:exon
so has part: feature:196665-196739:-1:exon
so has part: feature:196408-196479:-1:exon
so has part: feature:195928-196105:-1:exon
so has part: feature:195609-195719:-1:exon
so has part: feature:193903-193962:-1:exon
so has part: feature:191435-191531:-1:exon
so has part: feature:169115-169311:-1:exon
so has part: feature:166943-167034:-1:exon
so has part: feature:161330-161402:-1:exon
so has part: feature:160733-160825:-1:exon
so has part: feature:160088-160174:-1:exon
so has part: feature:159746-159820:-1:exon
so has part: feature:159370-159484:-1:exon
so has part: feature:158827-158933:-1:exon
so has part: feature:158036-158119:-1:exon
so has part: feature:157212-157405:-1:exon
so has part: feature:156772-156919:-1:exon
so has part: feature:155891-155977:-1:exon
so has part: feature:155431-155536:-1:exon
so has part: feature:154403-154440:-1:exon
so has part: feature:154181-154303:-1:exon
so has part: feature:153797-153901:-1:exon
so has part: feature:151034-151137:-1:exon
so has part: feature:149923-150046:-1:exon
so has part: feature:149093-149239:-1:exon

XP_035379293.1
type: Protein
SIO_000068: ncbiprotein

position:234342:-1
position: 234342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234321-234342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234060-234238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232882-233055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232402-232541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231998-232178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227481-227609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:225398-225631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224879-224981:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224663-224751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215812-215953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214857-214985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:212760-212839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:211162-211218:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:210913-211047:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:209116-209289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208542-208742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201878-202087:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201049-201141:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:199114-199392:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:198739-198826:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:198041-198134:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:196665-196739:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:196408-196479:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:195928-196105:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:195609-195719:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:193903-193962:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:191435-191531:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:169115-169311:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:166943-167034:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:161330-161402:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:160733-160825:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:160088-160174:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:159746-159820:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:159370-159484:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:158827-158933:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:158036-158119:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:157212-157405:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:156772-156919:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:155891-155977:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:155431-155536:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:154403-154440:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:154181-154303:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:153797-153901:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:151034-151137:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:149923-150046:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:149093-149239:-1:exon

tm2d1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: tm2d1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 235303..242703
location: region:235303-242703:1
so has part: feature:235303-242703:1:exon
subclass of: SO_0000010

113574469
type: Gene
SIO_000068: ncbigene

position:235303:1
position: 235303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242703:1
position: 242703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235303-242703:1:exon

tm2d1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tm2d1
product: TM2 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523402.1
SIO_010081: tm2d1
subclass of: SO_0000673
so part of: tm2d1
location: join(235303..235309,235593..235727,236167..236240,236375..236483,236595..236686,238426..238499,241068..241182,242316..242703)
location: region:235303-242703:1
so has part: feature:235303-235309:1:exon
so has part: feature:235593-235727:1:exon
so has part: feature:236167-236240:1:exon
so has part: feature:236375-236483:1:exon
so has part: feature:236595-236686:1:exon
so has part: feature:238426-238499:1:exon
so has part: feature:241068-241182:1:exon
so has part: feature:242316-242703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235303-235309:1:exon

position:235309:1
position: 235309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235593-235727:1:exon

position:235593:1
position: 235593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235727:1
position: 235727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236167-236240:1:exon

position:236167:1
position: 236167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236240:1
position: 236240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236375-236483:1:exon

position:236375:1
position: 236375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236483:1
position: 236483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:236595-236686:1:exon

position:236595:1
position: 236595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236686:1
position: 236686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:238426-238499:1:exon

position:238426:1
position: 238426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238499:1
position: 238499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241068-241182:1:exon

position:241068:1
position: 241068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241182:1
position: 241182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242316-242703:1:exon

position:242316:1
position: 242316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tm2d1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tm2d1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 1
translation: MAATWNGLFCALLCSTLPQIVTNNADGCADLRVGQYLCKSPKIDDATQEPENCKDLLAWVECLPAPNITCLLSNGTKFRFSGEEVGFNKSVPCRNVTGYSYKVAVALSLFVGWLGADRFYLGYPALGLLKFCTVGFCGIGSLVDFILISMQIVGPSDGSDYIVDYYGARLTRLSITNETYRRTQISP
SIO_010081: tm2d1
subclass of: SO_0000673
so part of: tm2d1
location: join(235624..235727,236167..236240,236375..236483,236595..236686,238426..238499,241068..241178)
location: region:235624-241178:1
so has part: feature:235624-235727:1:exon
so has part: feature:236167-236240:1:exon
so has part: feature:236375-236483:1:exon
so has part: feature:236595-236686:1:exon
so has part: feature:238426-238499:1:exon
so has part: feature:241068-241178:1:exon

XP_035379295.1
type: Protein
SIO_000068: ncbiprotein

position:235624:1
position: 235624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241178:1
position: 241178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235624-235727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236167-236240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236375-236483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236595-236686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238426-238499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241068-241178:1:exon

nfia
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(259402..413677)
location: region:259402-413677:-1
so has part: feature:259402-413677:-1:exon
subclass of: SO_0000010

113574507
type: Gene
SIO_000068: ncbigene

position:259402:-1
position: 259402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413677:-1
position: 413677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259402-413677:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005478.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278282..278445,286007..286135,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..413677))
location: region:259402-413677:-1
so has part: feature:412743-413677:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278282-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412743-413677:-1:exon

position:412743:-1
position: 412743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

position:376373:-1
position: 376373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376901:-1
position: 376901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

position:312777:-1
position: 312777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312842:-1
position: 312842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

position:305725:-1
position: 305725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305799:-1
position: 305799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

position:296474:-1
position: 296474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296591:-1
position: 296591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

position:294889:-1
position: 294889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295016:-1
position: 295016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

position:291980:-1
position: 291980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292030:-1
position: 292030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:286007-286135:-1:exon

position:286007:-1
position: 286007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286135:-1
position: 286135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:278282-278445:-1:exon

position:278282:-1
position: 278282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278445:-1
position: 278445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:276921-277086:-1:exon

position:276921:-1
position: 276921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277086:-1
position: 277086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:273904-273995:-1:exon

position:273904:-1
position: 273904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273995:-1
position: 273995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:259402-264018:-1:exon

position:264018:-1
position: 264018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005480.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278282..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..413676))
location: region:259402-413676:-1
so has part: feature:412743-413676:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278282-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

position:413676:-1
position: 413676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412743-413676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278282-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005477.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,286007..286135,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..413676))
location: region:259402-413676:-1
so has part: feature:412743-413676:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412743-413676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278267-278445:-1:exon

position:278267:-1
position: 278267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005479.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..413675))
location: region:259402-413675:-1
so has part: feature:412743-413675:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

position:413675:-1
position: 413675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412743-413675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005483.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..413675))
location: region:259402-413675:-1
so has part: feature:412743-413675:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412743-413675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005485.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..413674))
location: region:259402-413674:-1
so has part: feature:412743-413674:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

position:413674:-1
position: 413674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412743-413674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027005487.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381984))
location: region:259402-381984:-1
so has part: feature:381855-381984:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

position:381984:-1
position: 381984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381984:-1:exon

position:381855:-1
position: 381855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027005484.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278282..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381984))
location: region:259402-381984:-1
so has part: feature:381855-381984:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278282-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278282-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027005482.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381984))
location: region:259402-381984:-1
so has part: feature:381855-381984:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027005486.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381984))
location: region:259402-381984:-1
so has part: feature:381855-381984:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nfia
product: nuclear factor I/A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027005481.2
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(259402..264018,273904..273995,276921..277086,278267..278445,286007..286135,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381984))
location: region:259402-381984:-1
so has part: feature:381855-381984:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:259402-264018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259402-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X9
translation: MKLADSVMAAKTSEGSVKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..412838))
location: region:264004-412838:-1
so has part: feature:412743-412838:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861286.2
type: Protein
SIO_000068: ncbiprotein

position:264004:-1
position: 264004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412838:-1
position: 412838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412743-412838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X4
translation: MKLADSVMAAKTSEGSVKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPGMPSPTTLKKAEKSGFSGPVAVQTASPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278282..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..412838))
location: region:264004-412838:-1
so has part: feature:412743-412838:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278282-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861281.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412743-412838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278282-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X3
translation: MKLADSVMAAKTSEGSVKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPGMPSPTTLKKAEKSGFSGPVAVQTASPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..412838))
location: region:264004-412838:-1
so has part: feature:412743-412838:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861280.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412743-412838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X7
translation: MKLADSVMAAKTSEGSVKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPAGYKLRGSLASSFISRQASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..412838))
location: region:264004-412838:-1
so has part: feature:412743-412838:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861284.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412743-412838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X2
translation: MKLADSVMAAKTSEGSVKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPAGYKLRGSLASSFISRQGMPSPTTLKKAEKSGFSGPVAVQTASPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278282..278445,286007..286135,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..412838))
location: region:264004-412838:-1
so has part: feature:412743-412838:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278282-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861279.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412743-412838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278282-278445:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X1
translation: MKLADSVMAAKTSEGSVKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPAGYKLRGSLASSFISRQGMPSPTTLKKAEKSGFSGPVAVQTASPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,286007..286135,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,412743..412838))
location: region:264004-412838:-1
so has part: feature:412743-412838:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861278.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412743-412838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X11
translation: MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381881))
location: region:264004-381881:-1
so has part: feature:381855-381881:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861288.2
type: Protein
SIO_000068: ncbiprotein

position:381881:-1
position: 381881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X8
translation: MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPGMPSPTTLKKAEKSGFSGPVAVQTASPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278282..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381881))
location: region:264004-381881:-1
so has part: feature:381855-381881:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278282-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861285.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278282-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X6
translation: MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPGMPSPTTLKKAEKSGFSGPVAVQTASPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,286007..286135,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381881))
location: region:264004-381881:-1
so has part: feature:381855-381881:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861283.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X10
translation: MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPAGYKLRGSLASSFISRQASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381881))
location: region:264004-381881:-1
so has part: feature:381855-381881:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861287.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264004-264018:-1:exon

nfia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nfia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 A-type isoform X5
translation: MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTGKKAPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAETVQSESPNQPSEGDIKDQPENGHLGFQDSFVTSGVFTVSELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIKCMEEEVDSPGEEPYYPAQGRSPGSGSQASSWHEVEPAGYKLRGSLASSFISRQGMPSPTTLKKAEKSGFSGPVAVQTASPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPGSYFSHPAIRYHPQETLKEFVQLVCPDSGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSAEGGSNSPTSPTYSTPSTSPAQRFVSVGPRDPSFVNIPQQPQWYLG
SIO_010081: nfia
subclass of: SO_0000673
so part of: nfia
location: complement(join(264004..264018,273904..273995,276921..277086,278267..278445,286007..286135,291980..292030,294889..295016,296474..296591,305725..305799,312777..312842,376373..376901,381855..381881))
location: region:264004-381881:-1
so has part: feature:381855-381881:-1:exon
so has part: feature:376373-376901:-1:exon
so has part: feature:312777-312842:-1:exon
so has part: feature:305725-305799:-1:exon
so has part: feature:296474-296591:-1:exon
so has part: feature:294889-295016:-1:exon
so has part: feature:291980-292030:-1:exon
so has part: feature:286007-286135:-1:exon
so has part: feature:278267-278445:-1:exon
so has part: feature:276921-277086:-1:exon
so has part: feature:273904-273995:-1:exon
so has part: feature:264004-264018:-1:exon

XP_026861282.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381855-381881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376373-376901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312777-312842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305725-305799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296474-296591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294889-295016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291980-292030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286007-286135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278267-278445:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276921-277086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273904-273995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264004-264018:-1:exon

LOC113574508
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113574508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 414713..416441
location: region:414713-416441:1
so has part: feature:414713-416441:1:exon
subclass of: SO_0000011

113574508
type: Gene
SIO_000068: ncbigene

position:414713:1
position: 414713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416441:1
position: 416441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414713-416441:1:exon

LOC113574508
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC113574508
product: uncharacterized LOC113574508
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003410331.2
SIO_010081: LOC113574508
subclass of: SO_0000673
so part of: LOC113574508
location: join(414713..414795,415692..415760,415879..416441)
location: region:414713-416441:1
so has part: feature:414713-414795:1:exon
so has part: feature:415692-415760:1:exon
so has part: feature:415879-416441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414713-414795:1:exon

position:414795:1
position: 414795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:415692-415760:1:exon

position:415692:1
position: 415692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415760:1
position: 415760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:415879-416441:1:exon

position:415879:1
position: 415879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

frem1b
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: frem1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 431737..452883
location: region:431737-452883:1
so has part: feature:431737-452883:1:exon
subclass of: SO_0000010

113574538
type: Gene
SIO_000068: ncbigene

position:431737:1
position: 431737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452883:1
position: 452883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431737-452883:1:exon

frem1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: frem1b
product: Fras1 related extracellular matrix 1b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035523307.1
SIO_010081: frem1b
subclass of: SO_0000673
so part of: frem1b
location: join(431737..432174,433041..433389,433865..433959,434578..434867,435197..435396,435867..436190,436492..436600,436704..436835,439256..439600,439769..439911,440172..440368,440960..441050,441135..441302,441454..441662,441755..441848,442036..442288,442702..442896,444332..444514,444602..444798,444914..445139,445586..445730,446055..446196,446288..446483,446568..446832,448367..448781,449337..449538,449627..449771,450204..450333,450430..450502,450806..450955,451046..451332,451633..451803,452211..452326,452430..452515,452588..452883)
location: region:431737-452883:1
so has part: feature:431737-432174:1:exon
so has part: feature:433041-433389:1:exon
so has part: feature:433865-433959:1:exon
so has part: feature:434578-434867:1:exon
so has part: feature:435197-435396:1:exon
so has part: feature:435867-436190:1:exon
so has part: feature:436492-436600:1:exon
so has part: feature:436704-436835:1:exon
so has part: feature:439256-439600:1:exon
so has part: feature:439769-439911:1:exon
so has part: feature:440172-440368:1:exon
so has part: feature:440960-441050:1:exon
so has part: feature:441135-441302:1:exon
so has part: feature:441454-441662:1:exon
so has part: feature:441755-441848:1:exon
so has part: feature:442036-442288:1:exon
so has part: feature:442702-442896:1:exon
so has part: feature:444332-444514:1:exon
so has part: feature:444602-444798:1:exon
so has part: feature:444914-445139:1:exon
so has part: feature:445586-445730:1:exon
so has part: feature:446055-446196:1:exon
so has part: feature:446288-446483:1:exon
so has part: feature:446568-446832:1:exon
so has part: feature:448367-448781:1:exon
so has part: feature:449337-449538:1:exon
so has part: feature:449627-449771:1:exon
so has part: feature:450204-450333:1:exon
so has part: feature:450430-450502:1:exon
so has part: feature:450806-450955:1:exon
so has part: feature:451046-451332:1:exon
so has part: feature:451633-451803:1:exon
so has part: feature:452211-452326:1:exon
so has part: feature:452430-452515:1:exon
so has part: feature:452588-452883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431737-432174:1:exon

position:432174:1
position: 432174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433041-433389:1:exon

position:433041:1
position: 433041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433389:1
position: 433389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:433865-433959:1:exon

position:433865:1
position: 433865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433959:1
position: 433959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434578-434867:1:exon

position:434578:1
position: 434578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434867:1
position: 434867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:435197-435396:1:exon

position:435197:1
position: 435197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435396:1
position: 435396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435867-436190:1:exon

position:435867:1
position: 435867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436190:1
position: 436190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:436492-436600:1:exon

position:436492:1
position: 436492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436600:1
position: 436600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:436704-436835:1:exon

position:436704:1
position: 436704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436835:1
position: 436835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:439256-439600:1:exon

position:439256:1
position: 439256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439600:1
position: 439600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:439769-439911:1:exon

position:439769:1
position: 439769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439911:1
position: 439911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:440172-440368:1:exon

position:440172:1
position: 440172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440368:1
position: 440368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:440960-441050:1:exon

position:440960:1
position: 440960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441050:1
position: 441050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:441135-441302:1:exon

position:441135:1
position: 441135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441302:1
position: 441302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:441454-441662:1:exon

position:441454:1
position: 441454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441662:1
position: 441662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:441755-441848:1:exon

position:441755:1
position: 441755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441848:1
position: 441848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:442036-442288:1:exon

position:442036:1
position: 442036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442288:1
position: 442288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:442702-442896:1:exon

position:442702:1
position: 442702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442896:1
position: 442896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:444332-444514:1:exon

position:444332:1
position: 444332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444514:1
position: 444514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:444602-444798:1:exon

position:444602:1
position: 444602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444798:1
position: 444798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:444914-445139:1:exon

position:444914:1
position: 444914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445139:1
position: 445139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:445586-445730:1:exon

position:445586:1
position: 445586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445730:1
position: 445730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:446055-446196:1:exon

position:446055:1
position: 446055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446196:1
position: 446196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:446288-446483:1:exon

position:446288:1
position: 446288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446483:1
position: 446483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:446568-446832:1:exon

position:446568:1
position: 446568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446832:1
position: 446832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:448367-448781:1:exon

position:448367:1
position: 448367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448781:1
position: 448781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:449337-449538:1:exon

position:449337:1
position: 449337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449538:1
position: 449538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:449627-449771:1:exon

position:449627:1
position: 449627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449771:1
position: 449771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:450204-450333:1:exon

position:450204:1
position: 450204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450333:1
position: 450333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:450430-450502:1:exon

position:450430:1
position: 450430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450502:1
position: 450502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:450806-450955:1:exon

position:450806:1
position: 450806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450955:1
position: 450955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:451046-451332:1:exon

position:451046:1
position: 451046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451332:1
position: 451332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:451633-451803:1:exon

position:451633:1
position: 451633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451803:1
position: 451803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:452211-452326:1:exon

position:452211:1
position: 452211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452326:1
position: 452326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:452430-452515:1:exon

position:452430:1
position: 452430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452515:1
position: 452515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:452588-452883:1:exon

position:452588:1
position: 452588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

frem1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: frem1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FRAS1-related extracellular matrix protein 1b
translation: MGVVVLTWMLVTLSYLLSLGQTENVLKVNSGLQVFRGQSVSVTTRELQFDTDATSEACKVEVVLNEPVTQRVGKLTPQVFDCHFLPDEVKYVHNGSPLLEEDIVMLRVYRFTDIETFTESFMLKVEVMAPEKSLVEFGSAALVVPEFYGLSNAIDSNVLSFRTRHNVSCVVRLLSSEISIPMLGQVVTEDPALRDQASEPAPGPRKGRQTAISCPGNKACVHNSREVNFLKTSCSEFLTSGLKYQHLSPPSPEIDYVPIRVELRDQNSRALLEAESVWLPVLIHGAMPNQPPRAAFMSTLVLEVDQFILTPVTTATLDATDEESPHTRLAFNVTRPPAEGYITHLDDHTKAVSSFSWPDLNEMRIAYQPPNSSHTRRRNYEFEFQALDSFFAASPPVTVHISIRTAETNSPRVSWNLGLDLLEGQSRPITWENLQIVDNDNIDAVTLIAVDGPLHGRLSVRGGRGFMFKVKDLRDGAVVYHHSDSDTSRDHIVFRITDGRHSIRHKFPIYILPKDDTPPFLINNVAFEVQEGSAMLVEDYMLLATDLDSSDDYIQYRLVSLPRAGDLVRKTSPQDPGVPVESFLQKDLFQGLIYYRHSGDEMFEDLFEFILSDIHEPPNLSHKHTVVVHVFPVKDQLPVEVSGTLRSLSVKETEVVYITQSHLQFRAPEHPDTDLMYTVSQPCFSPLKTGLPDAGRLFYTESAKSMKKDAMVPVLRSFTQHAVTHHKVGYMPPIEDIGPEPLFVQFIFSVSDQQGGVLAGIVFNITVTPVDNQAPEMFTNLLRVEEGQGVFLVEEHLLVRDADSPEEKLRVQVQTQPRHGRLELQGALLLQGDSFLLQDLKALRVRYIHDDSETVRDSIGLQITDGINSAQGELLIQVLPVNDEPPRLGSGLRTGLSCEEGGHVHITAEHLFATDADSDDTRLTYMLARTPGRGVLQRNRVTVDKFSQSDVLHGLMSYLHTGGEIGPHPVSDIITIIVSDGEGGTADGCCQEEALPPPAPLHGTLPVYDLNITILPVNNQPPSITTGSMVVEEGSSVCLCRGALAATDPDTEPEQLTFHLETEPQHGFLENTLPSPGFEKSNAGIRVVSFSQLHLSSGFINYVQSLHQGVEPIADHFTIAVSDGVHKSGPVSFYIIIDPTNDEAPSLQLLNFTVIEGGVTGLNPTILDAVDLDAPPDTLSIAVLVPPAHGTLLDGTYGHEMSRYKGTGVELQQRSLPVHSFTIQALRQGMEVVYMHDDTDTLQDTFTIQLSDGSHSVQGTAWVHVLPVNDEKPRLLKNAGVELDALDRRVISSMVMEAEDRDTPSNQLYYILSASPRFGLLQLKTTAGWTDLGAGQNFTQEDVEMNRLWYKHTTFSEFKGHDRFQFYLSDMDNQTPSQSFFISVRAVPKGHIALTTQSVTVMEGDRVVLTTDVLLTMDSGSLPDELVYTVTDPPRHGHLHMAQRPGVPLFSFTHMDVAAHRVCYTHDNSHSADRDSFSFDVSNGVTSKGGSLVFTVEHADRIPPTLSINAGLQLVEGTTRTVSPEHLKLSDPDTAVESLTYALLQPPRFGRLLLKGLPLTQKSFTQLDVDNMHLSYQHLNSPAKIDRFTFQPSDGTNKGYLAFGQLQEKETVFTIQIEVLDKTPPNLVNKGTPSTVEQLQDYLQVIYITSKELQASDPDSPNQELEFIITRPPHFGYLENAITGGYVKGRFTQKDVDQQALRYVIPSDMEVTADSFEFQLSDPAGNTVLPEVMELRWSRVELTASCYRVCENAGTLAVQVMRSGNSRDPAYVGIQAQEGTAKVGKDFTHSSASLIQFDPGVNIKFWNIHLNDDRLEENHENLEVVLKAQKNAVLGQRRRASVEIVDPRDGRCDPDDLVVEGHEKEPPLLHSPSIYQSPPLAPQAPQEEDHTPDPNTGIVRDKPPLRGDVPHRTQLIRFSSGEAQEQPDLNQGRTQKRLMSDTGHTFHGMIPVRPEEEGPVPRVHPELEVMPIWSWAGRPTVLRPVDAPQRDAGFGSPVHQ…
SIO_010081: frem1b
subclass of: SO_0000673
so part of: frem1b
location: join(433156..433389,433865..433959,434578..434867,435197..435396,435867..436190,436492..436600,436704..436835,439256..439600,439769..439911,440172..440368,440960..441050,441135..441302,441454..441662,441755..441848,442036..442288,442702..442896,444332..444514,444602..444798,444914..445139,445586..445730,446055..446196,446288..446483,446568..446832,448367..448781,449337..449538,449627..449771,450204..450333,450430..450502,450806..450955,451046..451332,451633..451803,452211..452326,452430..452515,452588..452802)
location: region:433156-452802:1
so has part: feature:433156-433389:1:exon
so has part: feature:433865-433959:1:exon
so has part: feature:434578-434867:1:exon
so has part: feature:435197-435396:1:exon
so has part: feature:435867-436190:1:exon
so has part: feature:436492-436600:1:exon
so has part: feature:436704-436835:1:exon
so has part: feature:439256-439600:1:exon
so has part: feature:439769-439911:1:exon
so has part: feature:440172-440368:1:exon
so has part: feature:440960-441050:1:exon
so has part: feature:441135-441302:1:exon
so has part: feature:441454-441662:1:exon
so has part: feature:441755-441848:1:exon
so has part: feature:442036-442288:1:exon
so has part: feature:442702-442896:1:exon
so has part: feature:444332-444514:1:exon
so has part: feature:444602-444798:1:exon
so has part: feature:444914-445139:1:exon
so has part: feature:445586-445730:1:exon
so has part: feature:446055-446196:1:exon
so has part: feature:446288-446483:1:exon
so has part: feature:446568-446832:1:exon
so has part: feature:448367-448781:1:exon
so has part: feature:449337-449538:1:exon
so has part: feature:449627-449771:1:exon
so has part: feature:450204-450333:1:exon
so has part: feature:450430-450502:1:exon
so has part: feature:450806-450955:1:exon
so has part: feature:451046-451332:1:exon
so has part: feature:451633-451803:1:exon
so has part: feature:452211-452326:1:exon
so has part: feature:452430-452515:1:exon
so has part: feature:452588-452802:1:exon

XP_035379200.1
type: Protein
SIO_000068: ncbiprotein

position:433156:1
position: 433156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452802:1
position: 452802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433156-433389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433865-433959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434578-434867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435197-435396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435867-436190:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436492-436600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436704-436835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:439256-439600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439769-439911:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440172-440368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440960-441050:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:441135-441302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441454-441662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441755-441848:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:442036-442288:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442702-442896:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444332-444514:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444602-444798:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:444914-445139:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445586-445730:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:446055-446196:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:446288-446483:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:446568-446832:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:448367-448781:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:449337-449538:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:449627-449771:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:450204-450333:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:450430-450502:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:450806-450955:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:451046-451332:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:451633-451803:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:452211-452326:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:452430-452515:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:452588-452802:1:exon

atpaf1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: atpaf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452986..457094
location: region:452986-457094:1
so has part: feature:452986-457094:1:exon
subclass of: SO_0000010

113574527
type: Gene
SIO_000068: ncbigene

position:452986:1
position: 452986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457094:1
position: 457094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452986-457094:1:exon

atpaf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: atpaf1
product: ATP synthase mitochondrial F1 complex assembly factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005521.2
SIO_010081: atpaf1
subclass of: SO_0000673
so part of: atpaf1
location: join(452986..453199,453975..454083,454234..454281,454357..454419,454528..454578,454759..454806,455553..455648,455739..455846,456030..457094)
location: region:452986-457094:1
so has part: feature:452986-453199:1:exon
so has part: feature:453975-454083:1:exon
so has part: feature:454234-454281:1:exon
so has part: feature:454357-454419:1:exon
so has part: feature:454528-454578:1:exon
so has part: feature:454759-454806:1:exon
so has part: feature:455553-455648:1:exon
so has part: feature:455739-455846:1:exon
so has part: feature:456030-457094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452986-453199:1:exon

position:453199:1
position: 453199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453975-454083:1:exon

position:453975:1
position: 453975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454083:1
position: 454083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454234-454281:1:exon

position:454234:1
position: 454234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454281:1
position: 454281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454357-454419:1:exon

position:454357:1
position: 454357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454419:1
position: 454419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:454528-454578:1:exon

position:454528:1
position: 454528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454578:1
position: 454578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:454759-454806:1:exon

position:454759:1
position: 454759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454806:1
position: 454806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:455553-455648:1:exon

position:455553:1
position: 455553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455648:1
position: 455648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:455739-455846:1:exon

position:455739:1
position: 455739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455846:1
position: 455846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:456030-457094:1:exon

position:456030:1
position: 456030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atpaf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: atpaf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase mitochondrial F1 complex assembly factor 1
translation: MAAALLQMACLYRGLLAVRATGIRPLIPGLVPCHFRAFSFKKDPELEENPYYSKYEEKIKQLRSTKPQEYKARLEMRHEVKKEPVGQSRQAEFIRCLDQEMDKQQNPGVGGFTENKTLGSILNLHMVQDKSGVEIGELWMQYFSTKDTISAVIPGSTFEKMVSRAKSCPMFLYALPQKEGYEFFLGQWAGQELHFTSLINVQTLGENAPSQLVLYHYSELQKDKDIVLMTAEMDGKFITVHQAQCLANQVQLFYAAQRHETFQLVETFNHRPTDFKHMSVIAELEQSGIGGATTK
SIO_010081: atpaf1
subclass of: SO_0000673
so part of: atpaf1
location: join(453009..453199,453975..454083,454234..454281,454357..454419,454528..454578,454759..454806,455553..455648,455739..455846,456030..456203)
location: region:453009-456203:1
so has part: feature:453009-453199:1:exon
so has part: feature:453975-454083:1:exon
so has part: feature:454234-454281:1:exon
so has part: feature:454357-454419:1:exon
so has part: feature:454528-454578:1:exon
so has part: feature:454759-454806:1:exon
so has part: feature:455553-455648:1:exon
so has part: feature:455739-455846:1:exon
so has part: feature:456030-456203:1:exon

XP_026861322.2
type: Protein
SIO_000068: ncbiprotein

position:453009:1
position: 453009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456203:1
position: 456203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453009-453199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453975-454083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:454234-454281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454357-454419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454528-454578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454759-454806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455553-455648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455739-455846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456030-456203:1:exon

rab3b
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: rab3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 457133..462548
location: region:457133-462548:1
so has part: feature:457133-462548:1:exon
subclass of: SO_0000010

113574528
type: Gene
SIO_000068: ncbigene

position:457133:1
position: 457133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462548:1
position: 462548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457133-462548:1:exon

rab3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rab3b
product: RAB3B, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005522.2
SIO_010081: rab3b
subclass of: SO_0000673
so part of: rab3b
location: join(457133..457357,457838..458062,459620..459738,460833..460957,461054..462548)
location: region:457133-462548:1
so has part: feature:457133-457357:1:exon
so has part: feature:457838-458062:1:exon
so has part: feature:459620-459738:1:exon
so has part: feature:460833-460957:1:exon
so has part: feature:461054-462548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457133-457357:1:exon

position:457357:1
position: 457357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457838-458062:1:exon

position:457838:1
position: 457838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458062:1
position: 458062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459620-459738:1:exon

position:459620:1
position: 459620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459738:1
position: 459738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460833-460957:1:exon

position:460833:1
position: 460833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460957:1
position: 460957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:461054-462548:1:exon

position:461054:1
position: 461054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rab3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rab3b
product: RAB3B, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035523285.1
SIO_010081: rab3b
subclass of: SO_0000673
so part of: rab3b
location: join(457418..457519,457838..458062,459620..459738,460833..460957,461054..462548)
location: region:457418-462548:1
so has part: feature:457418-457519:1:exon
so has part: feature:457838-458062:1:exon
so has part: feature:459620-459738:1:exon
so has part: feature:460833-460957:1:exon
so has part: feature:461054-462548:1:exon

position:457418:1
position: 457418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457418-457519:1:exon

position:457519:1
position: 457519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457838-458062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459620-459738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460833-460957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461054-462548:1:exon

rab3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rab3b
product: RAB3B, member RAS oncogene family, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005523.2
SIO_010081: rab3b
subclass of: SO_0000673
so part of: rab3b
location: join(457554..457648,457838..458062,459620..459738,460833..460957,461054..462548)
location: region:457554-462548:1
so has part: feature:457554-457648:1:exon
so has part: feature:457838-458062:1:exon
so has part: feature:459620-459738:1:exon
so has part: feature:460833-460957:1:exon
so has part: feature:461054-462548:1:exon

position:457554:1
position: 457554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457554-457648:1:exon

position:457648:1
position: 457648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457838-458062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459620-459738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460833-460957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461054-462548:1:exon

rab3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rab3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3B
translation: MAKAEHRFGQRDGSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFSNSFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMDDERVVPVEKGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERVDADPSMVTGAKTTRLNDNPPQLPQNCC
SIO_010081: rab3b
subclass of: SO_0000673
so part of: rab3b
location: join(457838..458062,459620..459738,460833..460957,461054..461238)
location: region:457838-461238:1
so has part: feature:457838-458062:1:exon
so has part: feature:459620-459738:1:exon
so has part: feature:460833-460957:1:exon
so has part: feature:461054-461238:1:exon

XP_026861323.1
type: Protein
SIO_000068: ncbiprotein

position:461238:1
position: 461238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457838-458062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459620-459738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460833-460957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461054-461238:1:exon

rab3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rab3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3B
translation: MAKAEHRFGQRDGSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFSNSFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMDDERVVPVEKGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERVDADPSMVTGAKTTRLNDNPPQLPQNCC
SIO_010081: rab3b
subclass of: SO_0000673
so part of: rab3b
location: join(457838..458062,459620..459738,460833..460957,461054..461238)
location: region:457838-461238:1
so has part: feature:457838-458062:1:exon
so has part: feature:459620-459738:1:exon
so has part: feature:460833-460957:1:exon
so has part: feature:461054-461238:1:exon

XP_026861324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457838-458062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459620-459738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460833-460957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461054-461238:1:exon

rab3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rab3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3B
translation: MAKAEHRFGQRDGSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFSNSFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMDDERVVPVEKGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERVDADPSMVTGAKTTRLNDNPPQLPQNCC
SIO_010081: rab3b
subclass of: SO_0000673
so part of: rab3b
location: join(457838..458062,459620..459738,460833..460957,461054..461238)
location: region:457838-461238:1
so has part: feature:457838-458062:1:exon
so has part: feature:459620-459738:1:exon
so has part: feature:460833-460957:1:exon
so has part: feature:461054-461238:1:exon

XP_035379178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457838-458062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459620-459738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460833-460957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461054-461238:1:exon

nrd1b
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: nrd1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 463529..477987
location: region:463529-477987:1
so has part: feature:463529-477987:1:exon
subclass of: SO_0000010

113574543
type: Gene
SIO_000068: ncbigene

position:463529:1
position: 463529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477987:1
position: 477987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463529-477987:1:exon

nrd1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nrd1b
product: nardilysin b (N-arginine dibasic convertase)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035523317.1
SIO_010081: nrd1b
subclass of: SO_0000673
so part of: nrd1b
location: join(463529..463606,464136..464348,464470..464761,465032..465113,466025..466178,466675..466748,466863..466958,467169..467291,467514..467571,467665..467738,468090..468159,468526..468603,468700..468820,470337..470395,470482..470536,470684..470788,472178..472301,472900..472986,473085..473204,473609..473660,473770..473920,474260..474387,474689..474851,475046..475077,475454..475592,475725..475772,475865..475917,476029..476112,476391..476598,476789..476878,477175..477987)
location: region:463529-477987:1
so has part: feature:463529-463606:1:exon
so has part: feature:464136-464348:1:exon
so has part: feature:464470-464761:1:exon
so has part: feature:465032-465113:1:exon
so has part: feature:466025-466178:1:exon
so has part: feature:466675-466748:1:exon
so has part: feature:466863-466958:1:exon
so has part: feature:467169-467291:1:exon
so has part: feature:467514-467571:1:exon
so has part: feature:467665-467738:1:exon
so has part: feature:468090-468159:1:exon
so has part: feature:468526-468603:1:exon
so has part: feature:468700-468820:1:exon
so has part: feature:470337-470395:1:exon
so has part: feature:470482-470536:1:exon
so has part: feature:470684-470788:1:exon
so has part: feature:472178-472301:1:exon
so has part: feature:472900-472986:1:exon
so has part: feature:473085-473204:1:exon
so has part: feature:473609-473660:1:exon
so has part: feature:473770-473920:1:exon
so has part: feature:474260-474387:1:exon
so has part: feature:474689-474851:1:exon
so has part: feature:475046-475077:1:exon
so has part: feature:475454-475592:1:exon
so has part: feature:475725-475772:1:exon
so has part: feature:475865-475917:1:exon
so has part: feature:476029-476112:1:exon
so has part: feature:476391-476598:1:exon
so has part: feature:476789-476878:1:exon
so has part: feature:477175-477987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463529-463606:1:exon

position:463606:1
position: 463606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464136-464348:1:exon

position:464136:1
position: 464136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464348:1
position: 464348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464470-464761:1:exon

position:464470:1
position: 464470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464761:1
position: 464761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465032-465113:1:exon

position:465032:1
position: 465032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465113:1
position: 465113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:466025-466178:1:exon

position:466025:1
position: 466025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466178:1
position: 466178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466675-466748:1:exon

position:466675:1
position: 466675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466748:1
position: 466748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:466863-466958:1:exon

position:466863:1
position: 466863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466958:1
position: 466958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:467169-467291:1:exon

position:467169:1
position: 467169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467291:1
position: 467291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:467514-467571:1:exon

position:467514:1
position: 467514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467571:1
position: 467571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:467665-467738:1:exon

position:467665:1
position: 467665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467738:1
position: 467738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:468090-468159:1:exon

position:468090:1
position: 468090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468159:1
position: 468159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:468526-468603:1:exon

position:468526:1
position: 468526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468603:1
position: 468603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:468700-468820:1:exon

position:468700:1
position: 468700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468820:1
position: 468820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:470337-470395:1:exon

position:470337:1
position: 470337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470395:1
position: 470395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:470482-470536:1:exon

position:470482:1
position: 470482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470536:1
position: 470536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:470684-470788:1:exon

position:470684:1
position: 470684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470788:1
position: 470788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:472178-472301:1:exon

position:472178:1
position: 472178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472301:1
position: 472301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:472900-472986:1:exon

position:472900:1
position: 472900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472986:1
position: 472986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:473085-473204:1:exon

position:473085:1
position: 473085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473204:1
position: 473204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:473609-473660:1:exon

position:473609:1
position: 473609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473660:1
position: 473660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:473770-473920:1:exon

position:473770:1
position: 473770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473920:1
position: 473920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:474260-474387:1:exon

position:474260:1
position: 474260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474387:1
position: 474387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:474689-474851:1:exon

position:474689:1
position: 474689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474851:1
position: 474851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:475046-475077:1:exon

position:475046:1
position: 475046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475077:1
position: 475077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:475454-475592:1:exon

position:475454:1
position: 475454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475592:1
position: 475592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:475725-475772:1:exon

position:475725:1
position: 475725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475772:1
position: 475772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:475865-475917:1:exon

position:475865:1
position: 475865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475917:1
position: 475917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:476029-476112:1:exon

position:476029:1
position: 476029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476112:1
position: 476112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:476391-476598:1:exon

position:476391:1
position: 476391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476598:1
position: 476598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:476789-476878:1:exon

position:476789:1
position: 476789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476878:1
position: 476878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:477175-477987:1:exon

position:477175:1
position: 477175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nrd1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nrd1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nardilysin b
translation: MPQKNKSTTSCGTIQASGPDSGEPPPETDARASLASGDRAERSETDLGDLEIIKSPSDPKKYRYFELTNGLRALLISDLSQVHSEHRDTDDEDDDDDEEDGDDEEDEEEEEEESSEEDNSEQEDLDNEEDADSSEQDGDSKDSDCCTGVRKKKKGRSEKQSAAALCICVGSFSDPEDLPGLAHFLEHMVFMGSEKYPAENGFDAFLKKHGGSDNASTDCERTIFQFDVQRKYFREALDRWAQFFICPLMIEDAIDREVEAVDSEYQLAKPSDSHRKEMLFGSLAKPKHPMSKFCWGNAQTLKHEPKEKGTNTYERLRDFWRRHYSAHYMTLTVQSRETLDTLEEWVREIFTKVPNNFEPRPDFSNLQDPFDTPHFCKLYRVVPVRKIHALTISWALPPQGKYYRVKPLHYISWLIGHEGTGSILSMLRKKCWALALFGGNSETGFDQNTTYSIFSISITLTDEGYQNFYQVIHLVFQYLKMLQKFGPQQRIYEEIQKIEANEFHYQEQTDPIEFVENICENMQLFPKEDFLCGDQLMFEYNPEVISRALALLTPERANLLLLSPEHEGLCSLKEKWFGTQYSVEDVAGEWGEQWAGDFPLNPELHLPAENKFIATDFTLKTSDCPDTEFPVKIIDNSRGRLWFKKDKKFKIPKAYIRFNLLTPLIQESPENLVLFDIFVNILAHNLAEPAYDADVAQLEYKLMPGDHGLVVRLKGFNHKLPLLLELIVDYLADFTTTPDVFSMFTEQLKKTYFNILIKPERLGKDVRLQILEHSRWSVIQKYQAVVKNLTVDDLMLFVAKFKAEMFVEGLVQGNFTSAESKEFLQYFIKRLQFQPLPAEPPVLFRVVELPQKHHLCKVQSLNKGDANSEVTVYYQSGLKNLREHTLMELLVMHMEEPCFDFLRTKETLGYQVYPTCRNTSGVLGFSITVETQATKFSTDFVETKIEEFLVNFGEKLSNLSAEAFQTQVTALIKLKECEDTHLGEEVDRNWFEVVTEQYLFNRLNKEIEALKQMTKAELVSWFMEHRGAQNRKLSIHVAGFGEVEKGLHGDSQTCADPAGNTGDARSSSYGEVSKLTFLPASVALAGATAITDIRAFTSSLTLYPYHKILA
SIO_010081: nrd1b
subclass of: SO_0000673
so part of: nrd1b
location: join(464161..464348,464470..464761,465032..465113,466025..466178,466675..466748,466863..466958,467169..467291,467514..467571,467665..467738,468090..468159,468526..468603,468700..468820,470337..470395,470482..470536,470684..470788,472178..472301,472900..472986,473085..473204,473609..473660,473770..473920,474260..474387,474689..474851,475046..475077,475454..475592,475725..475772,475865..475917,476029..476112,476391..476598,476789..476878,477175..477399)
location: region:464161-477399:1
so has part: feature:464161-464348:1:exon
so has part: feature:464470-464761:1:exon
so has part: feature:465032-465113:1:exon
so has part: feature:466025-466178:1:exon
so has part: feature:466675-466748:1:exon
so has part: feature:466863-466958:1:exon
so has part: feature:467169-467291:1:exon
so has part: feature:467514-467571:1:exon
so has part: feature:467665-467738:1:exon
so has part: feature:468090-468159:1:exon
so has part: feature:468526-468603:1:exon
so has part: feature:468700-468820:1:exon
so has part: feature:470337-470395:1:exon
so has part: feature:470482-470536:1:exon
so has part: feature:470684-470788:1:exon
so has part: feature:472178-472301:1:exon
so has part: feature:472900-472986:1:exon
so has part: feature:473085-473204:1:exon
so has part: feature:473609-473660:1:exon
so has part: feature:473770-473920:1:exon
so has part: feature:474260-474387:1:exon
so has part: feature:474689-474851:1:exon
so has part: feature:475046-475077:1:exon
so has part: feature:475454-475592:1:exon
so has part: feature:475725-475772:1:exon
so has part: feature:475865-475917:1:exon
so has part: feature:476029-476112:1:exon
so has part: feature:476391-476598:1:exon
so has part: feature:476789-476878:1:exon
so has part: feature:477175-477399:1:exon

XP_035379210.1
type: Protein
SIO_000068: ncbiprotein

position:464161:1
position: 464161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477399:1
position: 477399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464161-464348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464470-464761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465032-465113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466025-466178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466675-466748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466863-466958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:467169-467291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467514-467571:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467665-467738:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468090-468159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468526-468603:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:468700-468820:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:470337-470395:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:470482-470536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:470684-470788:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:472178-472301:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:472900-472986:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:473085-473204:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:473609-473660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:473770-473920:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:474260-474387:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:474689-474851:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:475046-475077:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:475454-475592:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:475725-475772:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:475865-475917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:476029-476112:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:476391-476598:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:476789-476878:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:477175-477399:1:exon

axdnd1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: axdnd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 478440..488693
location: region:478440-488693:1
so has part: feature:478440-488693:1:exon
subclass of: SO_0000010

113574535
type: Gene
SIO_000068: ncbigene

position:478440:1
position: 478440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488693:1
position: 488693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478440-488693:1:exon

axdnd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: axdnd1
product: axonemal dynein light chain domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027005532.2
SIO_010081: axdnd1
subclass of: SO_0000673
so part of: axdnd1
location: join(478440..478623,478787..478965,479080..479183,479331..479430,479524..479609,479698..479754,479880..479988,481162..481283,481635..481775,482028..482132,482405..482525,482668..482769,482930..483096,483182..483251,483336..483570,483811..484027,484408..484501,484603..484805,485028..485118,485476..485613,485958..486113,486240..486365,486486..486577,488132..488262,488506..488693)
location: region:478440-488693:1
so has part: feature:478440-478623:1:exon
so has part: feature:478787-478965:1:exon
so has part: feature:479080-479183:1:exon
so has part: feature:479331-479430:1:exon
so has part: feature:479524-479609:1:exon
so has part: feature:479698-479754:1:exon
so has part: feature:479880-479988:1:exon
so has part: feature:481162-481283:1:exon
so has part: feature:481635-481775:1:exon
so has part: feature:482028-482132:1:exon
so has part: feature:482405-482525:1:exon
so has part: feature:482668-482769:1:exon
so has part: feature:482930-483096:1:exon
so has part: feature:483182-483251:1:exon
so has part: feature:483336-483570:1:exon
so has part: feature:483811-484027:1:exon
so has part: feature:484408-484501:1:exon
so has part: feature:484603-484805:1:exon
so has part: feature:485028-485118:1:exon
so has part: feature:485476-485613:1:exon
so has part: feature:485958-486113:1:exon
so has part: feature:486240-486365:1:exon
so has part: feature:486486-486577:1:exon
so has part: feature:488132-488262:1:exon
so has part: feature:488506-488693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478440-478623:1:exon

position:478623:1
position: 478623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478787-478965:1:exon

position:478787:1
position: 478787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478965:1
position: 478965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479080-479183:1:exon

position:479080:1
position: 479080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479183:1
position: 479183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:479331-479430:1:exon

position:479331:1
position: 479331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479430:1
position: 479430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:479524-479609:1:exon

position:479524:1
position: 479524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479609:1
position: 479609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:479698-479754:1:exon

position:479698:1
position: 479698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479754:1
position: 479754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:479880-479988:1:exon

position:479880:1
position: 479880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479988:1
position: 479988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:481162-481283:1:exon

position:481162:1
position: 481162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481283:1
position: 481283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:481635-481775:1:exon

position:481635:1
position: 481635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481775:1
position: 481775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:482028-482132:1:exon

position:482028:1
position: 482028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482132:1
position: 482132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:482405-482525:1:exon

position:482405:1
position: 482405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482525:1
position: 482525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:482668-482769:1:exon

position:482668:1
position: 482668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482769:1
position: 482769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:482930-483096:1:exon

position:482930:1
position: 482930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483096:1
position: 483096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:483182-483251:1:exon

position:483182:1
position: 483182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483251:1
position: 483251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:483336-483570:1:exon

position:483336:1
position: 483336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483570:1
position: 483570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:483811-484027:1:exon

position:483811:1
position: 483811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484027:1
position: 484027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:484408-484501:1:exon

position:484408:1
position: 484408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484501:1
position: 484501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:484603-484805:1:exon

position:484603:1
position: 484603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484805:1
position: 484805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:485028-485118:1:exon

position:485028:1
position: 485028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485118:1
position: 485118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:485476-485613:1:exon

position:485476:1
position: 485476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485613:1
position: 485613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:485958-486113:1:exon

position:485958:1
position: 485958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486113:1
position: 486113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:486240-486365:1:exon

position:486240:1
position: 486240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486365:1
position: 486365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:486486-486577:1:exon

position:486486:1
position: 486486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486577:1
position: 486577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:488132-488262:1:exon

position:488132:1
position: 488132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488262:1
position: 488262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:488506-488693:1:exon

position:488506:1
position: 488506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

axdnd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: axdnd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: axonemal dynein light chain domain-containing protein 1
translation: MSASIKTSPPQPTLPAPVLRRSKRPSNSPDSSTTHVSVAEPPAVTERSPRHGTAHSQMLPLRNDLIPDELLATLRSTVYSHGRIGPPKLTKTPEHLQVSGIRAPDVVWHYSTGRKKYQYFLDQPTSVTGAGRDISFLCDALAAQRPRGTLPPMTDRATTQSPDQKDAKYMETLIPAEYHIVKNKGLKGLQCYDDKFTVLLEDEEKKLKMFPSMKPGGRLEAVQLMKVMDDMLDKAGVSQPLEQLTHLSQMQGLLELVRVEQNIYNIVFHELIRQVSVECVERGQLLAKLRQRYVALLDRIPQQLQGLHAETLAQRALDRRLTQEIICFKRSIAKLNQELSEMRVRDEQVSTQAERAHQELARALEQSQHNSDVLGEYHSLYELQRRRLEGQVAALTEERDLWTKVTYSLALKVIKLNNLQLVSRLHISAQTWSQTAEHCTVVLTTKNSEDLNHILHLTDQWKEQLTSFMENLRRTERNQCESIRSVQKGTAKWHEFCQANVRCTDVKFEKTSVEELFNDLKQWSMSLTTQCERYGGEDLLSGQEILDTLTHLQETWVEVFLQLFWRHPDLNGEAPKGKETMRELSHAVTELHKQLSTRISGESGIHRQMMHLAGGMEFWAKKLKSLAGQPEALPHSDWLKLEKALKGWSRLSEEALLNVDSTQPESEKMIHKPHVTMETEHVCNTLREFLSTQNNFFDNENLRLCKEVRSMDTLLIRWMVELLLLMAPDCHSDQEAPSSPLPEFHALEDMSIQKLEEDARNVAWKLDNLTKYITGSCQAIVEEEVQRNMPQDETEKQLHELRKLQRECGEWVKVCGILLSDSLGCPVAPLLPGKAAPQSATDMCLSSAGSPVDVHSAPESPEEAEEDEEGKEEEEEKPGAKAASRRHSDTTHDQVTDIYFHKTEEEGGAVEVTGGEEEGSVLKLVGHDGHIIEQTLGEETVQLVGTGDFVMRPYTGNAHHAYGALATVNMLQTELLAVEVRATSAEDRALRAEEDLQEALEKIQCLQRQLSHKPSVEVKESKGSAPEAQFAEKAPTPETQDASPETASSPKPNRGRKKR
SIO_010081: axdnd1
subclass of: SO_0000673
so part of: axdnd1
location: join(478512..478623,478787..478965,479080..479183,479331..479430,479524..479609,479698..479754,479880..479988,481162..481283,481635..481775,482028..482132,482405..482525,482668..482769,482930..483096,483182..483251,483336..483570,483811..484027,484408..484501,484603..484805,485028..485118,485476..485613,485958..486113,486240..486365,486486..486577,488132..488262,488506..488627)
location: region:478512-488627:1
so has part: feature:478512-478623:1:exon
so has part: feature:478787-478965:1:exon
so has part: feature:479080-479183:1:exon
so has part: feature:479331-479430:1:exon
so has part: feature:479524-479609:1:exon
so has part: feature:479698-479754:1:exon
so has part: feature:479880-479988:1:exon
so has part: feature:481162-481283:1:exon
so has part: feature:481635-481775:1:exon
so has part: feature:482028-482132:1:exon
so has part: feature:482405-482525:1:exon
so has part: feature:482668-482769:1:exon
so has part: feature:482930-483096:1:exon
so has part: feature:483182-483251:1:exon
so has part: feature:483336-483570:1:exon
so has part: feature:483811-484027:1:exon
so has part: feature:484408-484501:1:exon
so has part: feature:484603-484805:1:exon
so has part: feature:485028-485118:1:exon
so has part: feature:485476-485613:1:exon
so has part: feature:485958-486113:1:exon
so has part: feature:486240-486365:1:exon
so has part: feature:486486-486577:1:exon
so has part: feature:488132-488262:1:exon
so has part: feature:488506-488627:1:exon

XP_026861333.2
type: Protein
SIO_000068: ncbiprotein

position:478512:1
position: 478512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488627:1
position: 488627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478512-478623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478787-478965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479080-479183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479331-479430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479524-479609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479698-479754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479880-479988:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481162-481283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481635-481775:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482028-482132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482405-482525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482668-482769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:482930-483096:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:483182-483251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:483336-483570:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:483811-484027:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:484408-484501:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:484603-484805:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:485028-485118:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:485476-485613:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:485958-486113:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:486240-486365:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:486486-486577:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:488132-488262:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:488506-488627:1:exon

nphs2
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: nphs2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(488873..492331)
location: region:488873-492331:-1
so has part: feature:488873-492331:-1:exon
subclass of: SO_0000010

113574532
type: Gene
SIO_000068: ncbigene

position:488873:-1
position: 488873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492331:-1
position: 492331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488873-492331:-1:exon

nphs2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nphs2
product: NPHS2 stomatin family member, podocin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027005529.2
SIO_010081: nphs2
subclass of: SO_0000673
so part of: nphs2
location: complement(join(488873..489267,489593..489671,489989..490044,490298..490501,491260..491342,491452..491524,491624..491727,491827..492331))
location: region:488873-492331:-1
so has part: feature:491827-492331:-1:exon
so has part: feature:491624-491727:-1:exon
so has part: feature:491452-491524:-1:exon
so has part: feature:491260-491342:-1:exon
so has part: feature:490298-490501:-1:exon
so has part: feature:489989-490044:-1:exon
so has part: feature:489593-489671:-1:exon
so has part: feature:488873-489267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491827-492331:-1:exon

position:491827:-1
position: 491827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491624-491727:-1:exon

position:491624:-1
position: 491624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491727:-1
position: 491727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491452-491524:-1:exon

position:491452:-1
position: 491452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491524:-1
position: 491524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491260-491342:-1:exon

position:491260:-1
position: 491260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491342:-1
position: 491342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:490298-490501:-1:exon

position:490298:-1
position: 490298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490501:-1
position: 490501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:489989-490044:-1:exon

position:489989:-1
position: 489989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490044:-1
position: 490044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:489593-489671:-1:exon

position:489593:-1
position: 489593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489671:-1
position: 489671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:488873-489267:-1:exon

position:489267:-1
position: 489267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nphs2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nphs2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podocin
translation: MFLMEKSEMERRTELVLPAHLPRHVRTKRDTPAAARERRHRGHRSVKVQEAPRRKDRVRSEKTGHEDTARDKPGASSSTVINVDSVREKTREEDEELLGLLQSDEDEALKPHSFGVCELLLIVAALTAVIFFFPVSLWFCVKIVREHERAVVFRLGHLLQRKPRGAGLLFYLPILDVCQKVDIRLKMLKVPLHTVVTKDLVCTEVSAVCYYRIENACVCCSSVAGVTEELQALVQVSIREVLAHHSFTHILQNRSTLAQEIQVVLDSIACRWGIKVEAAHMEDVQLPPELQHNFAVEAEAKRQAQIRLIAAEGEKAACEVLRASVDTLSSSPLAVQLRLLQLLHTLRSDQPAVLLNLPSDLLSQPLQLSTTASSTNQNCPVDDTSQETAKDSPMM
SIO_010081: nphs2
subclass of: SO_0000673
so part of: nphs2
location: complement(join(489001..489267,489593..489671,489989..490044,490298..490501,491260..491342,491452..491524,491624..491727,491827..492148))
location: region:489001-492148:-1
so has part: feature:491827-492148:-1:exon
so has part: feature:491624-491727:-1:exon
so has part: feature:491452-491524:-1:exon
so has part: feature:491260-491342:-1:exon
so has part: feature:490298-490501:-1:exon
so has part: feature:489989-490044:-1:exon
so has part: feature:489593-489671:-1:exon
so has part: feature:489001-489267:-1:exon

XP_026861330.2
type: Protein
SIO_000068: ncbiprotein

position:489001:-1
position: 489001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492148:-1
position: 492148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491827-492148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491624-491727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491452-491524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491260-491342:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490298-490501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489989-490044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489593-489671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:489001-489267:-1:exon

tdrd5
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: tdrd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492598..501954
location: region:492598-501954:1
so has part: feature:492598-501954:1:exon
subclass of: SO_0000010

113574539
type: Gene
SIO_000068: ncbigene

position:492598:1
position: 492598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501954:1
position: 501954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492598-501954:1:exon

tdrd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tdrd5
product: tudor domain containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035523286.1
SIO_010081: tdrd5
subclass of: SO_0000673
so part of: tdrd5
location: join(492598..492831,493335..493571,493784..494233,494511..494668,495132..495215,495309..495365,495778..495937,496314..496486,496633..496853,497652..497861,498040..498106,499089..499286,499417..499563,499953..500273,500697..500829,501544..501954)
location: region:492598-501954:1
so has part: feature:492598-492831:1:exon
so has part: feature:493335-493571:1:exon
so has part: feature:493784-494233:1:exon
so has part: feature:494511-494668:1:exon
so has part: feature:495132-495215:1:exon
so has part: feature:495309-495365:1:exon
so has part: feature:495778-495937:1:exon
so has part: feature:496314-496486:1:exon
so has part: feature:496633-496853:1:exon
so has part: feature:497652-497861:1:exon
so has part: feature:498040-498106:1:exon
so has part: feature:499089-499286:1:exon
so has part: feature:499417-499563:1:exon
so has part: feature:499953-500273:1:exon
so has part: feature:500697-500829:1:exon
so has part: feature:501544-501954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492598-492831:1:exon

position:492831:1
position: 492831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493335-493571:1:exon

position:493335:1
position: 493335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493571:1
position: 493571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:493784-494233:1:exon

position:493784:1
position: 493784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494233:1
position: 494233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:494511-494668:1:exon

position:494511:1
position: 494511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494668:1
position: 494668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:495132-495215:1:exon

position:495132:1
position: 495132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495215:1
position: 495215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:495309-495365:1:exon

position:495309:1
position: 495309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495365:1
position: 495365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:495778-495937:1:exon

position:495778:1
position: 495778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495937:1
position: 495937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:496314-496486:1:exon

position:496314:1
position: 496314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496486:1
position: 496486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:496633-496853:1:exon

position:496633:1
position: 496633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496853:1
position: 496853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:497652-497861:1:exon

position:497652:1
position: 497652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497861:1
position: 497861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:498040-498106:1:exon

position:498040:1
position: 498040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498106:1
position: 498106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:499089-499286:1:exon

position:499089:1
position: 499089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499286:1
position: 499286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:499417-499563:1:exon

position:499417:1
position: 499417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499563:1
position: 499563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:499953-500273:1:exon

position:499953:1
position: 499953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500273:1
position: 500273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:500697-500829:1:exon

position:500697:1
position: 500697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500829:1
position: 500829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:501544-501954:1:exon

position:501544:1
position: 501544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tdrd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tdrd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor domain-containing protein 5
translation: MAQDELLSGLKKDLRSLLVSAKRGLSPEQLRRDYLCMLGQAVPLRRLGFRSMLDMVKQMPDVVQLDYAVDGSVLLKAIGDETTKGIEELVSKQRDRKSRSSARKGASPSGYPSRQRPLALPRCGPAPPAIPAQLRSQLKRLLLHGPVGLSELEARYTACFGRPLQVTHYGFYSIAEMLAAASDLIAVRQSRTGSQLILKVAVRHRPTPATMPPTWPARISEFPANSVQREKSVVDNIKSPKNVSSPKQGAAVRAQQVEPIAPVPEPATQEQTFEKSVAKLEEDLRQRILENGDNSAVSPELKDKLRKVVAGHSRGLTIHDLPLEYKNMYGEDLPMAQCGFLSVTEMVSTLSDTFDLQPGLEQGAKHLLIMEVKHNGPDPAFSQSEGGPCAESLNPSSQGYYSTCSKSAWERNDEGNETTESSESNVEIRITNKTVHQMEPIFPVAVVGYADAHAVPLDALRCQRLKPPTRRKERELVPVLVEHTGSPGHFSVRFSVNQEAWTLENMMFEMRNCYTFPEVTERYRLPDAYVRPGQVCCVSPGYMWFYRVVIHQVLSTTQVEVYYVDFGDLATVDRSGLRFLKSCYAELPAQAVPSVLVGVKPLKGIWTKDATSTFRKLCYDRTLVAAIHSYQEDILQLFLCDTHTEEDLYIHRALQAEGHGTACSPASTPIFWQFNPVTLYLREGQLEEVKEHLTNRTPSADVPRDHGLDCWPRQHPTTMLTDAVEKLQLSRGTDDLLDLPELELIDADPVGLETGVFDGRLASQCRVTRSCCSPSIQVVTAGPCGALMERQAAAFGYWDYGWTRRNGAGKDAPEPAREWQEESAAAGSASAASPVGLSAEGQLLSEHVQESERAQQPASSIHALSRDRASMCSGNWSHRPPASFMFPSSFNSPGHRLGPDTLFFSRASPLGRGPAIRMAAGT
SIO_010081: tdrd5
subclass of: SO_0000673
so part of: tdrd5
location: join(493343..493571,493784..494233,494511..494668,495132..495215,495309..495365,495778..495937,496314..496486,496633..496853,497652..497861,498040..498106,499089..499286,499417..499563,499953..500273,500697..500829,501544..501704)
location: region:493343-501704:1
so has part: feature:493343-493571:1:exon
so has part: feature:493784-494233:1:exon
so has part: feature:494511-494668:1:exon
so has part: feature:495132-495215:1:exon
so has part: feature:495309-495365:1:exon
so has part: feature:495778-495937:1:exon
so has part: feature:496314-496486:1:exon
so has part: feature:496633-496853:1:exon
so has part: feature:497652-497861:1:exon
so has part: feature:498040-498106:1:exon
so has part: feature:499089-499286:1:exon
so has part: feature:499417-499563:1:exon
so has part: feature:499953-500273:1:exon
so has part: feature:500697-500829:1:exon
so has part: feature:501544-501704:1:exon

XP_035379179.1
type: Protein
SIO_000068: ncbiprotein

position:493343:1
position: 493343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501704:1
position: 501704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493343-493571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493784-494233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:494511-494668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:495132-495215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:495309-495365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495778-495937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:496314-496486:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:496633-496853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:497652-497861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498040-498106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499089-499286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:499417-499563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:499953-500273:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:500697-500829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:501544-501704:1:exon

fam163a
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: fam163a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 504424..512254
location: region:504424-512254:1
so has part: feature:504424-512254:1:exon
subclass of: SO_0000010

113574531
type: Gene
SIO_000068: ncbigene

position:504424:1
position: 504424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512254:1
position: 512254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504424-512254:1:exon

fam163a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: fam163a
product: family with sequence similarity 163 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027005526.2
SIO_010081: fam163a
subclass of: SO_0000673
so part of: fam163a
location: join(504424..504687,510056..510170,510356..512254)
location: region:504424-512254:1
so has part: feature:504424-504687:1:exon
so has part: feature:510056-510170:1:exon
so has part: feature:510356-512254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504424-504687:1:exon

position:504687:1
position: 504687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510056-510170:1:exon

position:510056:1
position: 510056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510170:1
position: 510170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:510356-512254:1:exon

position:510356:1
position: 510356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam163a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: fam163a
product: family with sequence similarity 163 member A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027005527.2
SIO_010081: fam163a
subclass of: SO_0000673
so part of: fam163a
location: join(509306..509423,510056..510170,510356..512254)
location: region:509306-512254:1
so has part: feature:509306-509423:1:exon
so has part: feature:510056-510170:1:exon
so has part: feature:510356-512254:1:exon

position:509306:1
position: 509306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509306-509423:1:exon

position:509423:1
position: 509423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510056-510170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:510356-512254:1:exon

fam163a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: fam163a
product: family with sequence similarity 163 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035523147.1
SIO_010081: fam163a
subclass of: SO_0000673
so part of: fam163a
location: join(510002..510170,510356..512254)
location: region:510002-512254:1
so has part: feature:510002-510170:1:exon
so has part: feature:510356-512254:1:exon

position:510002:1
position: 510002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510002-510170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510356-512254:1:exon

fam163a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: fam163a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM163A
translation: MTAGTVVITGGILAAVILLCIIVVLCYCRLQYYCCKKDGSDPDSTSCSQTQLARDASSLPRVDGAGVAPLPLSPRSAPAGAFCPVCSPYGSSLYIRTPGEACNGAMRIAYTPAHHDSLSLSLTLPSTHGALPNSHTLPDFYSSTRAISTEV
SIO_010081: fam163a
subclass of: SO_0000673
so part of: fam163a
location: join(510078..510170,510356..510718)
location: region:510078-510718:1
so has part: feature:510078-510170:1:exon
so has part: feature:510356-510718:1:exon

XP_026861327.1
type: Protein
SIO_000068: ncbiprotein

position:510078:1
position: 510078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510718:1
position: 510718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510078-510170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510356-510718:1:exon

fam163a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: fam163a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM163A
translation: MTAGTVVITGGILAAVILLCIIVVLCYCRLQYYCCKKDGSDPDSTSCSQTQLARDASSLPRVDGAGVAPLPLSPRSAPAGAFCPVCSPYGSSLYIRTPGEACNGAMRIAYTPAHHDSLSLSLTLPSTHGALPNSHTLPDFYSSTRAISTEV
SIO_010081: fam163a
subclass of: SO_0000673
so part of: fam163a
location: join(510078..510170,510356..510718)
location: region:510078-510718:1
so has part: feature:510078-510170:1:exon
so has part: feature:510356-510718:1:exon

XP_026861328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510078-510170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510356-510718:1:exon

fam163a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: fam163a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM163A
translation: MTAGTVVITGGILAAVILLCIIVVLCYCRLQYYCCKKDGSDPDSTSCSQTQLARDASSLPRVDGAGVAPLPLSPRSAPAGAFCPVCSPYGSSLYIRTPGEACNGAMRIAYTPAHHDSLSLSLTLPSTHGALPNSHTLPDFYSSTRAISTEV
SIO_010081: fam163a
subclass of: SO_0000673
so part of: fam163a
location: join(510078..510170,510356..510718)
location: region:510078-510718:1
so has part: feature:510078-510170:1:exon
so has part: feature:510356-510718:1:exon

XP_035379040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510078-510170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510356-510718:1:exon

rabgap1l
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 513464..595724
location: region:513464-595724:1
so has part: feature:513464-595724:1:exon
subclass of: SO_0000010

113574499
type: Gene
SIO_000068: ncbigene

position:513464:1
position: 513464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595724:1
position: 595724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513464-595724:1:exon

rabgap1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rabgap1l
product: RAB GTPase activating protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035523235.1
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(513464..513550,518581..518764,518964..519153,519893..520103,521041..521215,521768..521928,522381..522491,524152..524218,525396..525498,527213..527379,530859..530985,534046..534139,538482..538632,566557..566670,567122..567196,568792..568917,569931..570074,573773..573814,578318..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..595724)
location: region:513464-595724:1
so has part: feature:513464-513550:1:exon
so has part: feature:518581-518764:1:exon
so has part: feature:518964-519153:1:exon
so has part: feature:519893-520103:1:exon
so has part: feature:521041-521215:1:exon
so has part: feature:521768-521928:1:exon
so has part: feature:522381-522491:1:exon
so has part: feature:524152-524218:1:exon
so has part: feature:525396-525498:1:exon
so has part: feature:527213-527379:1:exon
so has part: feature:530859-530985:1:exon
so has part: feature:534046-534139:1:exon
so has part: feature:538482-538632:1:exon
so has part: feature:566557-566670:1:exon
so has part: feature:567122-567196:1:exon
so has part: feature:568792-568917:1:exon
so has part: feature:569931-570074:1:exon
so has part: feature:573773-573814:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-595724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513464-513550:1:exon

position:513550:1
position: 513550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518581-518764:1:exon

position:518581:1
position: 518581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518764:1
position: 518764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518964-519153:1:exon

position:518964:1
position: 518964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519153:1
position: 519153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519893-520103:1:exon

position:519893:1
position: 519893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520103:1
position: 520103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:521041-521215:1:exon

position:521041:1
position: 521041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521215:1
position: 521215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:521768-521928:1:exon

position:521768:1
position: 521768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521928:1
position: 521928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:522381-522491:1:exon

position:522381:1
position: 522381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522491:1
position: 522491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524152-524218:1:exon

position:524152:1
position: 524152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524218:1
position: 524218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525396-525498:1:exon

position:525396:1
position: 525396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525498:1
position: 525498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:527213-527379:1:exon

position:527213:1
position: 527213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527379:1
position: 527379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:530859-530985:1:exon

position:530859:1
position: 530859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530985:1
position: 530985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:534046-534139:1:exon

position:534046:1
position: 534046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534139:1
position: 534139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:538482-538632:1:exon

position:538482:1
position: 538482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538632:1
position: 538632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:566557-566670:1:exon

position:566557:1
position: 566557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566670:1
position: 566670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:567122-567196:1:exon

position:567122:1
position: 567122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567196:1
position: 567196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:568792-568917:1:exon

position:568792:1
position: 568792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568917:1
position: 568917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:569931-570074:1:exon

position:569931:1
position: 569931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570074:1
position: 570074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:573773-573814:1:exon

position:573773:1
position: 573773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573814:1
position: 573814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:578318-578446:1:exon

position:578318:1
position: 578318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578446:1
position: 578446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:587555-587647:1:exon

position:587555:1
position: 587555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587647:1
position: 587647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:590270-590380:1:exon

position:590270:1
position: 590270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590380:1
position: 590380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:591811-591915:1:exon

position:591811:1
position: 591811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591915:1
position: 591915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:592004-592087:1:exon

position:592004:1
position: 592004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592087:1
position: 592087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:592783-592854:1:exon

position:592783:1
position: 592783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592854:1
position: 592854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:593185-593382:1:exon

position:593185:1
position: 593185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593382:1
position: 593382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:593753-595724:1:exon

position:593753:1
position: 593753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rabgap1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rabgap1l
product: RAB GTPase activating protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035523236.1
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(513464..513550,518581..518764,518964..519153,519893..520103,521041..521215,521768..521928,522381..522491,524152..524218,525396..525498,527213..527379,530859..530985,534046..534139,538482..538632,566557..566670,567122..567196,568792..568917,569931..570074,573773..573814,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..595724)
location: region:513464-595724:1
so has part: feature:513464-513550:1:exon
so has part: feature:518581-518764:1:exon
so has part: feature:518964-519153:1:exon
so has part: feature:519893-520103:1:exon
so has part: feature:521041-521215:1:exon
so has part: feature:521768-521928:1:exon
so has part: feature:522381-522491:1:exon
so has part: feature:524152-524218:1:exon
so has part: feature:525396-525498:1:exon
so has part: feature:527213-527379:1:exon
so has part: feature:530859-530985:1:exon
so has part: feature:534046-534139:1:exon
so has part: feature:538482-538632:1:exon
so has part: feature:566557-566670:1:exon
so has part: feature:567122-567196:1:exon
so has part: feature:568792-568917:1:exon
so has part: feature:569931-570074:1:exon
so has part: feature:573773-573814:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-595724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513464-513550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518581-518764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518964-519153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519893-520103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521041-521215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521768-521928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522381-522491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524152-524218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525396-525498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527213-527379:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:530859-530985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534046-534139:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:538482-538632:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:566557-566670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:567122-567196:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:568792-568917:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:569931-570074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:573773-573814:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:593753-595724:1:exon

rabgap1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rabgap1l
product: RAB GTPase activating protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035523237.1
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(513464..513550,518581..518764,518964..519153,519893..520103,521041..521215,521768..521928,522381..522491,524152..524218,525396..525498,527213..527379,530859..530985,534046..534139,538482..538632,566557..566670,567122..567196,568792..568917,569931..570074,573773..573814,578318..578446,587555..587647,587739..588690)
location: region:513464-588690:1
so has part: feature:513464-513550:1:exon
so has part: feature:518581-518764:1:exon
so has part: feature:518964-519153:1:exon
so has part: feature:519893-520103:1:exon
so has part: feature:521041-521215:1:exon
so has part: feature:521768-521928:1:exon
so has part: feature:522381-522491:1:exon
so has part: feature:524152-524218:1:exon
so has part: feature:525396-525498:1:exon
so has part: feature:527213-527379:1:exon
so has part: feature:530859-530985:1:exon
so has part: feature:534046-534139:1:exon
so has part: feature:538482-538632:1:exon
so has part: feature:566557-566670:1:exon
so has part: feature:567122-567196:1:exon
so has part: feature:568792-568917:1:exon
so has part: feature:569931-570074:1:exon
so has part: feature:573773-573814:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:587739-588690:1:exon

position:588690:1
position: 588690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513464-513550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518581-518764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518964-519153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519893-520103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521041-521215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521768-521928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522381-522491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524152-524218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525396-525498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527213-527379:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:530859-530985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534046-534139:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:538482-538632:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:566557-566670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:567122-567196:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:568792-568917:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:569931-570074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:573773-573814:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:578318-578446:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:587739-588690:1:exon

position:587739:1
position: 587739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rabgap1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X1
translation: MDYRTSLGKVSGSTESVSTVTSEEFVLVQPGAEGSPSSSEGRPRLKMSWNGSEQLQRAMEEVLEDELAREQRSAGSPDELSGVSRHLGADVAASLQKRPPSLGLNTTPAGGSVRAVAGPAVEEEEDSVQFSKLSYLGCTWVKAPRNEPEAQSAMATLRAESPGPIPITLYVPNGPDGCVRIVDQASGIEIASFPIYKVLFCARGKENSLESDCFSFTESYRSTDDFQIHVFSCHIKEAVSRILYSFFTAFKRSSKAAADAREPSLPQSPDSDIFTFTVSLEVREDDGKGNFSPVPKDREKYYFKLRQGVQKKVMVTVQQISNKELGIERCFGMLLSPGQKVRNSDMHLLDMESMGKSADGKAYLITGTWNPNTPAFQALNEDTPKDKQVYLTVAVDLVVTEVVEPVRFLVEALAKVYPANERFWYFSRKAFSETFYLQLKQGAERGSQGDTMYEVVSLQRQLEKEGGARARLQSPGEEEEPEEDSDSEISSGTGDVSKDCPEKILESWGGILNRWQGNLSARPKGLSALVRPGVPEALRAEVWQLLSGCQDDQALLERYRILITKESAQESVITRDIHRTFPAHDYFKESHGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFCVLVKIMYEYGLRDLYKNNFEDLHCKFYQLERLIQEQLPELWGHFQDLNLEAHMYASQWFLTLFTAKFPLCMVFHITDLLLCEGLNIIFNVALALLKTSKEDLLQADFEGALKFFRVQLPKRYRAAENARRLMEQACNIKVPTKKLKKFEKEYHTQRERQLQQEDPIDRYQRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLSTKQRLVETEEEKRRQEEETAQIKEVFRRELEKAELEIKKTTAIIAEYKQICSQLSTRLERQQASTKEELEMVKSKVMACERCRELFSKEGPLHIPAVSQDNRDSDLDEEKDSLKAQLRELELELAQTKLQLVEAKCRIQELEHQRGVLMTEVQAAKNSWFSKTLGSLKTSAGSQAPSSPKEGQ
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(518627..518764,518964..519153,519893..520103,521041..521215,521768..521928,522381..522491,524152..524218,525396..525498,527213..527379,530859..530985,534046..534139,538482..538632,566557..566670,567122..567196,568792..568917,569931..570074,573773..573814,578318..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..593887)
location: region:518627-593887:1
so has part: feature:518627-518764:1:exon
so has part: feature:518964-519153:1:exon
so has part: feature:519893-520103:1:exon
so has part: feature:521041-521215:1:exon
so has part: feature:521768-521928:1:exon
so has part: feature:522381-522491:1:exon
so has part: feature:524152-524218:1:exon
so has part: feature:525396-525498:1:exon
so has part: feature:527213-527379:1:exon
so has part: feature:530859-530985:1:exon
so has part: feature:534046-534139:1:exon
so has part: feature:538482-538632:1:exon
so has part: feature:566557-566670:1:exon
so has part: feature:567122-567196:1:exon
so has part: feature:568792-568917:1:exon
so has part: feature:569931-570074:1:exon
so has part: feature:573773-573814:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-593887:1:exon

XP_035379128.1
type: Protein
SIO_000068: ncbiprotein

position:518627:1
position: 518627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593887:1
position: 593887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518627-518764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518964-519153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519893-520103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521041-521215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521768-521928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522381-522491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524152-524218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:525396-525498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527213-527379:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530859-530985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534046-534139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538482-538632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:566557-566670:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:567122-567196:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:568792-568917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569931-570074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:573773-573814:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:578318-578446:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:593753-593887:1:exon

rabgap1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X2
translation: MDYRTSLGKVSGSTESVSTVTSEEFVLVQPGAEGSPSSSEGRPRLKMSWNGSEQLQRAMEEVLEDELAREQRSAGSPDELSGVSRHLGADVAASLQKRPPSLGLNTTPAGGSVRAVAGPAVEEEEDSVQFSKLSYLGCTWVKAPRNEPEAQSAMATLRAESPGPIPITLYVPNGPDGCVRIVDQASGIEIASFPIYKVLFCARGKENSLESDCFSFTESYRSTDDFQIHVFSCHIKEAVSRILYSFFTAFKRSSKAAADAREPSLPQSPDSDIFTFTVSLEVREDDGKGNFSPVPKDREKYYFKLRQGVQKKVMVTVQQISNKELGIERCFGMLLSPGQKVRNSDMHLLDMESMGKSADGKAYLITGTWNPNTPAFQALNEDTPKDKQVYLTVAVDLVVTEVVEPVRFLVEALAKVYPANERFWYFSRKAFSETFYLQLKQGAERGSQGDTMYEVVSLQRQLEKEGGARARLQSPGEEEEPEEDSDSEISSGTGDVSKDCPEKILESWGGILNRWQGNLSARPKGLSALVRPGVPEALRAEVWQLLSGCQDDQALLERYRILITKESAQESVITRDIHRTFPAHDYFKESHGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFCVLVKIMYEYGLRDLYKNNFEDLHCKFYQLERLIQEQLPELWGHFQDLNLEAHMYASQWFLTLFTAKFPLCMVFHITDLLLCEGLNIIFNVALALLKVPTKKLKKFEKEYHTQRERQLQQEDPIDRYQRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLSTKQRLVETEEEKRRQEEETAQIKEVFRRELEKAELEIKKTTAIIAEYKQICSQLSTRLERQQASTKEELEMVKSKVMACERCRELFSKEGPLHIPAVSQDNRDSDLDEEKDSLKAQLRELELELAQTKLQLVEAKCRIQELEHQRGVLMTEVQAAKNSWFSKTLGSLKTSAGSQAPSSPKEGQ
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(518627..518764,518964..519153,519893..520103,521041..521215,521768..521928,522381..522491,524152..524218,525396..525498,527213..527379,530859..530985,534046..534139,538482..538632,566557..566670,567122..567196,568792..568917,569931..570074,573773..573814,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..593887)
location: region:518627-593887:1
so has part: feature:518627-518764:1:exon
so has part: feature:518964-519153:1:exon
so has part: feature:519893-520103:1:exon
so has part: feature:521041-521215:1:exon
so has part: feature:521768-521928:1:exon
so has part: feature:522381-522491:1:exon
so has part: feature:524152-524218:1:exon
so has part: feature:525396-525498:1:exon
so has part: feature:527213-527379:1:exon
so has part: feature:530859-530985:1:exon
so has part: feature:534046-534139:1:exon
so has part: feature:538482-538632:1:exon
so has part: feature:566557-566670:1:exon
so has part: feature:567122-567196:1:exon
so has part: feature:568792-568917:1:exon
so has part: feature:569931-570074:1:exon
so has part: feature:573773-573814:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-593887:1:exon

XP_035379129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518627-518764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518964-519153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519893-520103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521041-521215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521768-521928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522381-522491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524152-524218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:525396-525498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527213-527379:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530859-530985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534046-534139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538482-538632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:566557-566670:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:567122-567196:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:568792-568917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569931-570074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:573773-573814:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:593753-593887:1:exon

rabgap1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X3
translation: MDYRTSLGKVSGSTESVSTVTSEEFVLVQPGAEGSPSSSEGRPRLKMSWNGSEQLQRAMEEVLEDELAREQRSAGSPDELSGVSRHLGADVAASLQKRPPSLGLNTTPAGGSVRAVAGPAVEEEEDSVQFSKLSYLGCTWVKAPRNEPEAQSAMATLRAESPGPIPITLYVPNGPDGCVRIVDQASGIEIASFPIYKVLFCARGKENSLESDCFSFTESYRSTDDFQIHVFSCHIKEAVSRILYSFFTAFKRSSKAAADAREPSLPQSPDSDIFTFTVSLEVREDDGKGNFSPVPKDREKYYFKLRQGVQKKVMVTVQQISNKELGIERCFGMLLSPGQKVRNSDMHLLDMESMGKSADGKAYLITGTWNPNTPAFQALNEDTPKDKQVYLTVAVDLVVTEVVEPVRFLVEALAKVYPANERFWYFSRKAFSETFYLQLKQGAERGSQGDTMYEVVSLQRQLEKEGGARARLQSPGEEEEPEEDSDSEISSGTGDVSKDCPEKILESWGGILNRWQGNLSARPKGLSALVRPGVPEALRAEVWQLLSGCQDDQALLERYRILITKESAQESVITRDIHRTFPAHDYFKESHGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFCVLVKIMYEYGLRDLYKNNFEDLHCKFYQLERLIQEQLPELWGHFQDLNLEAHMYASQWFLTLFTAKFPLCMVFHITDLLLCEGLNIIFNVALALLKTSKEDLLQADFEGALKFFRVQLPKRYRAAENARRLMEQACNIKVPTKKLKKFEKEYHTQRERQLQQEDPIDRYQFRTV
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(518627..518764,518964..519153,519893..520103,521041..521215,521768..521928,522381..522491,524152..524218,525396..525498,527213..527379,530859..530985,534046..534139,538482..538632,566557..566670,567122..567196,568792..568917,569931..570074,573773..573814,578318..578446,587555..587647,587739..587753)
location: region:518627-587753:1
so has part: feature:518627-518764:1:exon
so has part: feature:518964-519153:1:exon
so has part: feature:519893-520103:1:exon
so has part: feature:521041-521215:1:exon
so has part: feature:521768-521928:1:exon
so has part: feature:522381-522491:1:exon
so has part: feature:524152-524218:1:exon
so has part: feature:525396-525498:1:exon
so has part: feature:527213-527379:1:exon
so has part: feature:530859-530985:1:exon
so has part: feature:534046-534139:1:exon
so has part: feature:538482-538632:1:exon
so has part: feature:566557-566670:1:exon
so has part: feature:567122-567196:1:exon
so has part: feature:568792-568917:1:exon
so has part: feature:569931-570074:1:exon
so has part: feature:573773-573814:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:587739-587753:1:exon

XP_035379130.1
type: Protein
SIO_000068: ncbiprotein

position:587753:1
position: 587753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518627-518764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518964-519153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519893-520103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521041-521215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521768-521928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522381-522491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524152-524218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:525396-525498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527213-527379:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530859-530985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534046-534139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538482-538632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:566557-566670:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:567122-567196:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:568792-568917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569931-570074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:573773-573814:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:578318-578446:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:587739-587753:1:exon

gpr52
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: gpr52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 545256..550535
location: region:545256-550535:1
so has part: feature:545256-550535:1:exon
subclass of: SO_0000010

113574502
type: Gene
SIO_000068: ncbigene

position:545256:1
position: 545256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550535:1
position: 550535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545256-550535:1:exon

gpr52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: gpr52
product: G protein-coupled receptor 52
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027005471.2
SIO_010081: gpr52
subclass of: SO_0000673
so part of: gpr52
location: join(545256..546412,546528..550535)
location: region:545256-550535:1
so has part: feature:545256-546412:1:exon
so has part: feature:546528-550535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545256-546412:1:exon

position:546412:1
position: 546412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546528-550535:1:exon

position:546528:1
position: 546528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gpr52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: gpr52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 52
translation: MNQSGLVEPVSTGNGSLSSTYGVSLNLSCPLGWAQNEGSEACVLETAVIVLLTVLIIAGNLTVIFVFHCAPLLHHYTTSYFIQTMAYADLLVGMSCLVPTLSLLHFPAGVQEPLTCQVFSYVISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRCCIVVIWVYSCAVFLPSFFGWGKPGYHGDIFVWCARSWPTSALFTGFVVCLLYAPAALVVCFTYFHIFRICQQHNREISERRARFPSQEMEAGEGAQNTGHGPDRRYAMVLFRITSVFYMLWLPYIIYFLLESSHVLDSPALSFITTWLAISNSFCNCVIYSLSNSVFQLGMRRLSQTLCSFSPCAHDDKDFGEPKPRKRANSCSI
SIO_010081: gpr52
subclass of: SO_0000673
so part of: gpr52
location: 547126..548229
location: region:547126-548229:1
so has part: feature:547126-548229:1:exon

XP_026861272.1
type: Protein
SIO_000068: ncbiprotein

position:547126:1
position: 547126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548229:1
position: 548229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547126-548229:1:exon

rabgap1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rabgap1l
product: RAB GTPase activating protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035523238.1
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(576182..577818,578318..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..595724)
location: region:576182-595724:1
so has part: feature:576182-577818:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-595724:1:exon

position:576182:1
position: 576182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576182-577818:1:exon

position:577818:1
position: 577818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578318-578446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593753-595724:1:exon

rabgap1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rabgap1l
product: RAB GTPase activating protein 1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035523240.1
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(576188..576825,578318..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..595724)
location: region:576188-595724:1
so has part: feature:576188-576825:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-595724:1:exon

position:576188:1
position: 576188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576188-576825:1:exon

position:576825:1
position: 576825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578318-578446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593753-595724:1:exon

rabgap1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rabgap1l
product: RAB GTPase activating protein 1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035523242.1
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(576733..576843,578318..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..595724)
location: region:576733-595724:1
so has part: feature:576733-576843:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-595724:1:exon

position:576733:1
position: 576733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576733-576843:1:exon

position:576843:1
position: 576843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578318-578446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593753-595724:1:exon

rabgap1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X4
translation: MPPVLRALEEGEAAGEGGSPLGQDYTERVMSLLGMGHRLFVPRLLATSKEDLLQADFEGALKFFRVQLPKRYRAAENARRLMEQACNIKVPTKKLKKFEKEYHTQRERQLQQEDPIDRYQRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLSTKQRLVETEEEKRRQEEETAQIKEVFRRELEKAELEIKKTTAIIAEYKQICSQLSTRLERQQASTKEELEMVKSKVMACERCRELFSKEGPLHIPAVSQDNRDSDLDEEKDSLKAQLRELELELAQTKLQLVEAKCRIQELEHQRGVLMTEVQAAKNSWFSKTLGSLKTSAGSQAPSSPKEGQ
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(577681..577818,578318..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..593887)
location: region:577681-593887:1
so has part: feature:577681-577818:1:exon
so has part: feature:578318-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-593887:1:exon

XP_035379131.1
type: Protein
SIO_000068: ncbiprotein

position:577681:1
position: 577681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577681-577818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578318-578446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593753-593887:1:exon

rabgap1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X6
translation: MEQACNIKVPTKKLKKFEKEYHTQRERQLQQEDPIDRYQRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLSTKQRLVETEEEKRRQEEETAQIKEVFRRELEKAELEIKKTTAIIAEYKQICSQLSTRLERQQASTKEELEMVKSKVMACERCRELFSKEGPLHIPAVSQDNRDSDLDEEKDSLKAQLRELELELAQTKLQLVEAKCRIQELEHQRGVLMTEVQAAKNSWFSKTLGSLKTSAGSQAPSSPKEGQ
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(578423..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..593887)
location: region:578423-593887:1
so has part: feature:578423-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-593887:1:exon

XP_035379133.1
type: Protein
SIO_000068: ncbiprotein

position:578423:1
position: 578423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578423-578446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593753-593887:1:exon

rabgap1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X6
translation: MEQACNIKVPTKKLKKFEKEYHTQRERQLQQEDPIDRYQRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLSTKQRLVETEEEKRRQEEETAQIKEVFRRELEKAELEIKKTTAIIAEYKQICSQLSTRLERQQASTKEELEMVKSKVMACERCRELFSKEGPLHIPAVSQDNRDSDLDEEKDSLKAQLRELELELAQTKLQLVEAKCRIQELEHQRGVLMTEVQAAKNSWFSKTLGSLKTSAGSQAPSSPKEGQ
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(578423..578446,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..593887)
location: region:578423-593887:1
so has part: feature:578423-578446:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-593887:1:exon

XP_035379135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578423-578446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593753-593887:1:exon

rabgap1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rabgap1l
product: RAB GTPase activating protein 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035523239.1
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(583504..583688,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..595724)
location: region:583504-595724:1
so has part: feature:583504-583688:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-595724:1:exon

position:583504:1
position: 583504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583504-583688:1:exon

position:583688:1
position: 583688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593753-595724:1:exon

rabgap1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rabgap1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X5
translation: MMEEVSITVAYNAHVMNQICEEDIFASLVADSRPRPAVPTKKLKKFEKEYHTQRERQLQQEDPIDRYQRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLSTKQRLVETEEEKRRQEEETAQIKEVFRRELEKAELEIKKTTAIIAEYKQICSQLSTRLERQQASTKEELEMVKSKVMACERCRELFSKEGPLHIPAVSQDNRDSDLDEEKDSLKAQLRELELELAQTKLQLVEAKCRIQELEHQRGVLMTEVQAAKNSWFSKTLGSLKTSAGSQAPSSPKEGQ
SIO_010081: rabgap1l
subclass of: SO_0000673
so part of: rabgap1l
location: join(583578..583688,587555..587647,590270..590380,591811..591915,592004..592087,592783..592854,593185..593382,593753..593887)
location: region:583578-593887:1
so has part: feature:583578-583688:1:exon
so has part: feature:587555-587647:1:exon
so has part: feature:590270-590380:1:exon
so has part: feature:591811-591915:1:exon
so has part: feature:592004-592087:1:exon
so has part: feature:592783-592854:1:exon
so has part: feature:593185-593382:1:exon
so has part: feature:593753-593887:1:exon

XP_035379132.1
type: Protein
SIO_000068: ncbiprotein

position:583578:1
position: 583578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583578-583688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587555-587647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590270-590380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591811-591915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592004-592087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592783-592854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593185-593382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593753-593887:1:exon

LOC113574501
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113574501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(595884..602113)
location: region:595884-602113:-1
so has part: feature:595884-602113:-1:exon
subclass of: SO_0000010

113574501
type: Gene
SIO_000068: ncbigene

position:595884:-1
position: 595884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602113:-1
position: 602113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595884-602113:-1:exon

LOC113574501
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113574501
product: interferon-induced protein 44-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_027005470.2
SIO_010081: LOC113574501
subclass of: SO_0000673
so part of: LOC113574501
location: complement(join(595884..596408,598756..598856,598973..599147,599664..599816,600054..600249,600339..600399,600894..601394,601685..602113))
location: region:595884-602113:-1
so has part: feature:601685-602113:-1:exon
so has part: feature:600894-601394:-1:exon
so has part: feature:600339-600399:-1:exon
so has part: feature:600054-600249:-1:exon
so has part: feature:599664-599816:-1:exon
so has part: feature:598973-599147:-1:exon
so has part: feature:598756-598856:-1:exon
so has part: feature:595884-596408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601685-602113:-1:exon

position:601685:-1
position: 601685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600894-601394:-1:exon

position:600894:-1
position: 600894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601394:-1
position: 601394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:600339-600399:-1:exon

position:600339:-1
position: 600339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600399:-1
position: 600399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:600054-600249:-1:exon

position:600054:-1
position: 600054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600249:-1
position: 600249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599664-599816:-1:exon

position:599664:-1
position: 599664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599816:-1
position: 599816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598973-599147:-1:exon

position:598973:-1
position: 598973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599147:-1
position: 599147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598756-598856:-1:exon

position:598756:-1
position: 598756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598856:-1
position: 598856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:595884-596408:-1:exon

position:596408:-1
position: 596408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113574501
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113574501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein 44-like
translation: MASLTSKLNEQQLSRLYTLLGEVELNLLYKASVHGYAGQAFHQRCDRQGPTVVVAYSYSGYVFGGYTSKDYAQTGQYIDDEKAFLFSLQDPTPVWFRVMTAHGARARLDDASGPRFGDDMWFCYNNCAQVYCNPGNAYMFNTATMYGNNQQLIECEVYKVTEASVPGKSVEKKPWRNILWTAERRAELMESVKTYKPLISTVKQLRILMIGPVGAGKSSFFNSINSIFCGHVTSKAMSGSLDSSITKQYRTYTIRAGNEGVALPFILCDTMGLEEASEAGLSIDDISSAINGHIPDRYKFNPAAPYEAEDEVKPPRSLTLQDKVHCVVYVLDTCKVTLMPSKVEEKLTAIRKRANLLGIPQIVLLTKVDEACPLVEEDLQNIYLSSYIKTKVREASARVGVSMSSVIPVKNYSHELELELECDILLLTAIQQMLRFADNYFDDMSPGGDNVV
SIO_010081: LOC113574501
subclass of: SO_0000673
so part of: LOC113574501
location: complement(join(596223..596408,598756..598856,598973..599147,599664..599816,600054..600249,600339..600399,600894..601380))
location: region:596223-601380:-1
so has part: feature:600894-601380:-1:exon
so has part: feature:600339-600399:-1:exon
so has part: feature:600054-600249:-1:exon
so has part: feature:599664-599816:-1:exon
so has part: feature:598973-599147:-1:exon
so has part: feature:598756-598856:-1:exon
so has part: feature:596223-596408:-1:exon

XP_026861271.2
type: Protein
SIO_000068: ncbiprotein

position:596223:-1
position: 596223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601380:-1
position: 601380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600894-601380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600339-600399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600054-600249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599664-599816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598973-599147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598756-598856:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596223-596408:-1:exon

hnrnpm
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: hnrnpm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(602654..609868)
location: region:602654-609868:-1
so has part: feature:602654-609868:-1:exon
subclass of: SO_0000010

113574512
type: Gene
SIO_000068: ncbigene

position:602654:-1
position: 602654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609868:-1
position: 609868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602654-609868:-1:exon

hnrnpm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: hnrnpm
product: heterogeneous nuclear ribonucleoprotein M
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005491.2
SIO_010081: hnrnpm
subclass of: SO_0000673
so part of: hnrnpm
location: complement(join(602654..603050,603263..603314,603401..603981,604076..604180,604259..604330,604675..604716,604825..604926,605034..605094,605183..605232,605387..605540,605744..606058,606215..606308,606404..606411,607058..607110,608646..608818,609696..609868))
location: region:602654-609868:-1
so has part: feature:609696-609868:-1:exon
so has part: feature:608646-608818:-1:exon
so has part: feature:607058-607110:-1:exon
so has part: feature:606404-606411:-1:exon
so has part: feature:606215-606308:-1:exon
so has part: feature:605744-606058:-1:exon
so has part: feature:605387-605540:-1:exon
so has part: feature:605183-605232:-1:exon
so has part: feature:605034-605094:-1:exon
so has part: feature:604825-604926:-1:exon
so has part: feature:604675-604716:-1:exon
so has part: feature:604259-604330:-1:exon
so has part: feature:604076-604180:-1:exon
so has part: feature:603401-603981:-1:exon
so has part: feature:603263-603314:-1:exon
so has part: feature:602654-603050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609696-609868:-1:exon

position:609696:-1
position: 609696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:608646-608818:-1:exon

position:608646:-1
position: 608646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608818:-1
position: 608818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:607058-607110:-1:exon

position:607058:-1
position: 607058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607110:-1
position: 607110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:606404-606411:-1:exon

position:606404:-1
position: 606404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606411:-1
position: 606411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:606215-606308:-1:exon

position:606215:-1
position: 606215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606308:-1
position: 606308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605744-606058:-1:exon

position:605744:-1
position: 605744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606058:-1
position: 606058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:605387-605540:-1:exon

position:605387:-1
position: 605387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605540:-1
position: 605540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:605183-605232:-1:exon

position:605183:-1
position: 605183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605232:-1
position: 605232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:605034-605094:-1:exon

position:605034:-1
position: 605034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605094:-1
position: 605094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:604825-604926:-1:exon

position:604825:-1
position: 604825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604926:-1
position: 604926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:604675-604716:-1:exon

position:604675:-1
position: 604675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604716:-1
position: 604716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:604259-604330:-1:exon

position:604259:-1
position: 604259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604330:-1
position: 604330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:604076-604180:-1:exon

position:604076:-1
position: 604076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604180:-1
position: 604180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:603401-603981:-1:exon

position:603401:-1
position: 603401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603981:-1
position: 603981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:603263-603314:-1:exon

position:603263:-1
position: 603263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603314:-1
position: 603314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:602654-603050:-1:exon

position:603050:-1
position: 603050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hnrnpm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: hnrnpm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M
translation: MSAEATQEKPVQGNPVNGKASHEPRKERSSKRGGGRFEPYGNPSKRYRVFVSNIPYDVKWQALKDLMKDKVGEVTYVEHLMDAEGKSRGCAVVEFRTEELMKKAVEKVNKHNMNGRPLKVKEDPDGLIAQREAQRAQGGGGGGPPGGMGGGMGGGMGGGMGGGMGGGMGGGMGGGMGGGMGMGPGPGPGAPPMVNIPPSLMNNPNIPTEIIHGLQAGKIGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRTMHVKLDEKSLPKGDFAPPERPPALPRGLSGVGLGLGPGGQPIDATQLNRGGGMGNMGPGGMDGMGFGGMGRMGGMDNFGGGMNNMDRFGPSGMGRMNDMDRGIGAAFDREFGGRSEMGMSRNNFGDSFDRGMGNSMGMDRMSSGMDRLGAGLDRMGMDRMDRVSDLDRLGSGFDRMGSGLDRLGPSMDRLGPSMDRLGPSMDRLGSGLDRMSSSMDRLGPAGFDRLGPSSLDRMSAGMDFASPMGMDRMNTSLDRMGSAGLDRFPAPGMDRMTSNLDRMGAGGVGGQFDRGADMDRGNFGNFSSAGQGGPGAGANARKGCQIFVRNLPFDFTWKMLKDAFNSCGIVQYADIKMENGKSKGCGVVRFDTPETAERACRTMNGYRLNGREIDVRIDRNA
SIO_010081: hnrnpm
subclass of: SO_0000673
so part of: hnrnpm
location: complement(join(602887..603050,603263..603314,603401..603981,604076..604180,604259..604330,604675..604716,604825..604926,605034..605094,605183..605232,605387..605540,605744..606058,606215..606308,606404..606411,607058..607110,608646..608818,609696..609733))
location: region:602887-609733:-1
so has part: feature:609696-609733:-1:exon
so has part: feature:608646-608818:-1:exon
so has part: feature:607058-607110:-1:exon
so has part: feature:606404-606411:-1:exon
so has part: feature:606215-606308:-1:exon
so has part: feature:605744-606058:-1:exon
so has part: feature:605387-605540:-1:exon
so has part: feature:605183-605232:-1:exon
so has part: feature:605034-605094:-1:exon
so has part: feature:604825-604926:-1:exon
so has part: feature:604675-604716:-1:exon
so has part: feature:604259-604330:-1:exon
so has part: feature:604076-604180:-1:exon
so has part: feature:603401-603981:-1:exon
so has part: feature:603263-603314:-1:exon
so has part: feature:602887-603050:-1:exon

XP_026861292.2
type: Protein
SIO_000068: ncbiprotein

position:602887:-1
position: 602887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609733:-1
position: 609733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609696-609733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:608646-608818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607058-607110:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606404-606411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:606215-606308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605744-606058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605387-605540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605183-605232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:605034-605094:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604825-604926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604675-604716:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604259-604330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:604076-604180:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:603401-603981:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:603263-603314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:602887-603050:-1:exon

march2
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: march2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613130..619575)
location: region:613130-619575:-1
so has part: feature:613130-619575:-1:exon
subclass of: SO_0000010

113574530
type: Gene
SIO_000068: ncbigene

position:613130:-1
position: 613130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619575:-1
position: 619575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613130-619575:-1:exon

march2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: march2
product: membrane-associated ring finger (C3HC4) 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005525.2
SIO_010081: march2
subclass of: SO_0000673
so part of: march2
location: complement(join(613130..616738,616860..617069,617752..617947,618385..618643,619423..619575))
location: region:613130-619575:-1
so has part: feature:619423-619575:-1:exon
so has part: feature:618385-618643:-1:exon
so has part: feature:617752-617947:-1:exon
so has part: feature:616860-617069:-1:exon
so has part: feature:613130-616738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619423-619575:-1:exon

position:619423:-1
position: 619423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618385-618643:-1:exon

position:618385:-1
position: 618385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618643:-1
position: 618643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617752-617947:-1:exon

position:617752:-1
position: 617752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617947:-1
position: 617947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:616860-617069:-1:exon

position:616860:-1
position: 616860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617069:-1
position: 617069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613130-616738:-1:exon

position:616738:-1
position: 616738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

march2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: march2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF2
translation: MTTGECCHLPGSLCDCTGSGALSKNLDESDNRRAQYVTQVTAKDGRLLSTVIKALGTQSDGPICRICHEGANSEGLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTEFTIERRPRPLTEWLRDPGPRNEKRTLFCDMVCFLFITPLAAISGWLCLRGAQDHLQYNSRLEAVGLIALTIALFTIYVLWTLVSFRYHCQLYSEWRRTNQKVRLLIPDAKGAHSTQHSLLSTKLLKKTADETIV
SIO_010081: march2
subclass of: SO_0000673
so part of: march2
location: complement(join(616580..616738,616860..617069,617752..617947,618385..618560))
location: region:616580-618560:-1
so has part: feature:618385-618560:-1:exon
so has part: feature:617752-617947:-1:exon
so has part: feature:616860-617069:-1:exon
so has part: feature:616580-616738:-1:exon

XP_026861326.2
type: Protein
SIO_000068: ncbiprotein

position:616580:-1
position: 616580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618560:-1
position: 618560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618385-618560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617752-617947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616860-617069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616580-616738:-1:exon

rab11ba
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: rab11ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(621322..625375)
location: region:621322-625375:-1
so has part: feature:621322-625375:-1:exon
subclass of: SO_0000010

113574478
type: Gene
SIO_000068: ncbigene

position:621322:-1
position: 621322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625375:-1
position: 625375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621322-625375:-1:exon

rab11ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rab11ba
product: RAB11B, member RAS oncogene family, a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 153 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_027005428.2
SIO_010081: rab11ba
subclass of: SO_0000673
so part of: rab11ba
location: complement(join(621322..622315,622501..622581,622666..622859,623006..623201,625257..625375))
location: region:621322-625375:-1
so has part: feature:625257-625375:-1:exon
so has part: feature:623006-623201:-1:exon
so has part: feature:622666-622859:-1:exon
so has part: feature:622501-622581:-1:exon
so has part: feature:621322-622315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625257-625375:-1:exon

position:625257:-1
position: 625257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623006-623201:-1:exon

position:623006:-1
position: 623006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623201:-1
position: 623201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622666-622859:-1:exon

position:622666:-1
position: 622666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622859:-1
position: 622859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:622501-622581:-1:exon

position:622501:-1
position: 622501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622581:-1
position: 622581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:621322-622315:-1:exon

position:622315:-1
position: 622315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rab11ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rab11ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAB11B, member RAS oncogene family, a
translation: MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNNVVDITVPPTTDGLKGTKFQCCQNL
SIO_010081: rab11ba
subclass of: SO_0000673
so part of: rab11ba
location: complement(join(622170..622315,622501..622581,622666..622859,623006..623201,625257..625296))
location: region:622170-625296:-1
so has part: feature:625257-625296:-1:exon
so has part: feature:623006-623201:-1:exon
so has part: feature:622666-622859:-1:exon
so has part: feature:622501-622581:-1:exon
so has part: feature:622170-622315:-1:exon

XP_026861229.1
type: Protein
SIO_000068: ncbiprotein

position:622170:-1
position: 622170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625296:-1
position: 625296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625257-625296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623006-623201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622666-622859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622501-622581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:622170-622315:-1:exon

pip5k1ca
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: pip5k1ca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(625853..650431)
location: region:625853-650431:-1
so has part: feature:625853-650431:-1:exon
subclass of: SO_0000010

113574477
type: Gene
SIO_000068: ncbigene

position:625853:-1
position: 625853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650431:-1
position: 650431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625853-650431:-1:exon

pip5k1ca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: pip5k1ca
product: phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027005427.2
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(625853..627763,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650431))
location: region:625853-650431:-1
so has part: feature:650132-650431:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:625853-627763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650431:-1:exon

position:650132:-1
position: 650132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

position:645859:-1
position: 645859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645887:-1
position: 645887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

position:645627:-1
position: 645627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645713:-1
position: 645713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

position:645184:-1
position: 645184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645314:-1
position: 645314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

position:644764:-1
position: 644764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644881:-1
position: 644881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

position:642935:-1
position: 642935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643087:-1
position: 643087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

position:639787:-1
position: 639787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640086:-1
position: 640086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

position:637135:-1
position: 637135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637340:-1
position: 637340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

position:636773:-1
position: 636773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636856:-1
position: 636856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

position:636099:-1
position: 636099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636147:-1
position: 636147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

position:634035:-1
position: 634035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634119:-1
position: 634119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

position:633585:-1
position: 633585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633746:-1
position: 633746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

position:633165:-1
position: 633165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633306:-1
position: 633306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

position:632951:-1
position: 632951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632980:-1
position: 632980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

position:632605:-1
position: 632605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632703:-1
position: 632703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

position:630943:-1
position: 630943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631099:-1
position: 631099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:625853-627763:-1:exon

position:627763:-1
position: 627763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pip5k1ca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: pip5k1ca
product: phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005425.2
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(625853..627763,628281..628370,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650431))
location: region:625853-650431:-1
so has part: feature:650132-650431:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:628281-628370:-1:exon
so has part: feature:625853-627763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:628281-628370:-1:exon

position:628281:-1
position: 628281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628370:-1
position: 628370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:625853-627763:-1:exon

pip5k1ca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: pip5k1ca
product: phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027005424.2
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(625853..627763,628281..628373,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650431))
location: region:625853-650431:-1
so has part: feature:650132-650431:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:628281-628373:-1:exon
so has part: feature:625853-627763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:628281-628373:-1:exon

position:628373:-1
position: 628373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:625853-627763:-1:exon

pip5k1ca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: pip5k1ca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X4
translation: MEEAAEGAASLSEAGDGSPLSAAASDEAEPVIDVSYGMDAGDIDAAKKAFATEMPSSSGQPGLSKKIGHRGVDASGETTYKKTTSSALKGAIQLGIGYTVGNLSSKPERDVLMQDFYVVESIFFPSEGSNLTPAHHFPDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCNEPLIELSNPGASGSVFYVTKDDEFIIKTVMHKEAEFLQKLLPGYYMNLNQNPRTLLPKFFGLYCVQSGGKNIRMVVMNNILPRVVRMHLKYDLKGSTYKRRASKKEREKAKPTFKDLDFMQDIPEGLMLDADTYNALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAGREQQAEGLPGTSDGKRPPAQKALYSTAMESIQGASACGEDLETDDTMGGIPAVNSKGEHLLLYIGIIDILQSYRLIKKLEHTWKALVHDGDTVSVHRPSFYADRFFRFMSSMVFRKSTSLRSSPSRRGRGSLAVPRPVGPGAAWSASQLPFERDDNIYDLRGARSFPTLEDEVRSDVLPCTPPSFEEATTASIATTLSSSTSLSIPEHSPSDTSEHPRYRRHTQSSQDGTNQEDDQQTITVEVVRRRDSEPALLAPQPSPETSEAPEVTAEASGSSVPASPRILLDSDCTSQASGCASRSSVDEDEEVPITEIYF
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(627761..627763,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650261))
location: region:627761-650261:-1
so has part: feature:650132-650261:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:627761-627763:-1:exon

XP_026861228.2
type: Protein
SIO_000068: ncbiprotein

position:627761:-1
position: 627761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650261:-1
position: 650261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:627761-627763:-1:exon

pip5k1ca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: pip5k1ca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2
translation: MEEAAEGAASLSEAGDGSPLSAAASDEAEPVIDVSYGMDAGDIDAAKKAFATEMPSSSGQPGLSKKIGHRGVDASGETTYKKTTSSALKGAIQLGIGYTVGNLSSKPERDVLMQDFYVVESIFFPSEGSNLTPAHHFPDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCNEPLIELSNPGASGSVFYVTKDDEFIIKTVMHKEAEFLQKLLPGYYMNLNQNPRTLLPKFFGLYCVQSGGKNIRMVVMNNILPRVVRMHLKYDLKGSTYKRRASKKEREKAKPTFKDLDFMQDIPEGLMLDADTYNALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAGREQQAEGLPGTSDGKRPPAQKALYSTAMESIQGASACGEDLETDDTMGGIPAVNSKGEHLLLYIGIIDILQSYRLIKKLEHTWKALVHDGDTVSVHRPSFYADRFFRFMSSMVFRKSTSLRSSPSRRGRGSLAVPRPVGPGAAWSASQLPFERDDNIYDLRGARSFPTLEDEVRSDVLPCTPPSFEEATTASIATTLSSSTSLSIPEHSPSDTSEHPRYRRHTQSSQDGTNQEDDQQTITVEVVRRRDSEPALLAPQPSPETSEAPEVTAEASGSSVPASPRILLDSDCTSQASGCASRSSVDEDEEVPITEIYFPSEERIWVYSPLHYGTESKTLTEEDGESKT
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(627761..627763,628281..628370,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650261))
location: region:627761-650261:-1
so has part: feature:650132-650261:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:628281-628370:-1:exon
so has part: feature:627761-627763:-1:exon

XP_026861226.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:628281-628370:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:627761-627763:-1:exon

pip5k1ca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: pip5k1ca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1
translation: MEEAAEGAASLSEAGDGSPLSAAASDEAEPVIDVSYGMDAGDIDAAKKAFATEMPSSSGQPGLSKKIGHRGVDASGETTYKKTTSSALKGAIQLGIGYTVGNLSSKPERDVLMQDFYVVESIFFPSEGSNLTPAHHFPDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCNEPLIELSNPGASGSVFYVTKDDEFIIKTVMHKEAEFLQKLLPGYYMNLNQNPRTLLPKFFGLYCVQSGGKNIRMVVMNNILPRVVRMHLKYDLKGSTYKRRASKKEREKAKPTFKDLDFMQDIPEGLMLDADTYNALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAGREQQAEGLPGTSDGKRPPAQKALYSTAMESIQGASACGEDLETDDTMGGIPAVNSKGEHLLLYIGIIDILQSYRLIKKLEHTWKALVHDGDTVSVHRPSFYADRFFRFMSSMVFRKSTSLRSSPSRRGRGSLAVPRPVGPGAAWSASQLPFERDDNIYDLRGARSFPTLEDEVRSDVLPCTPPSFEEATTASIATTLSSSTSLSIPEHSPSDTSEHPRYRRHTQSSQDGTNQEDDQQTITVEVVRRRDSEPALLAPQPSPETSEAPEVTAEASGSSVPASPRILLDSDCTSQASGCASRSSVDEDEEVPITEIYFQPSEERIWVYSPLHYGTESKTLTEEDGESKT
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(627761..627763,628281..628373,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650261))
location: region:627761-650261:-1
so has part: feature:650132-650261:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:628281-628373:-1:exon
so has part: feature:627761-627763:-1:exon

XP_026861225.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:628281-628373:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:627761-627763:-1:exon

pip5k1ca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: pip5k1ca
product: phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027005426.2
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(629815..630543,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650431))
location: region:629815-650431:-1
so has part: feature:650132-650431:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:629815-630543:-1:exon

position:629815:-1
position: 629815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:629815-630543:-1:exon

position:630543:-1
position: 630543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pip5k1ca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: pip5k1ca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3
translation: MEEAAEGAASLSEAGDGSPLSAAASDEAEPVIDVSYGMDAGDIDAAKKAFATEMPSSSGQPGLSKKIGHRGVDASGETTYKKTTSSALKGAIQLGIGYTVGNLSSKPERDVLMQDFYVVESIFFPSEGSNLTPAHHFPDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCNEPLIELSNPGASGSVFYVTKDDEFIIKTVMHKEAEFLQKLLPGYYMNLNQNPRTLLPKFFGLYCVQSGGKNIRMVVMNNILPRVVRMHLKYDLKGSTYKRRASKKEREKAKPTFKDLDFMQDIPEGLMLDADTYNALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAGREQQAEGLPGTSDGKRPPAQKALYSTAMESIQGASACGEDLETDDTMGGIPAVNSKGEHLLLYIGIIDILQSYRLIKKLEHTWKALVHDGDTVSVHRPSFYADRFFRFMSSMVFRKSTSLRSSPSRRGRGSLAVPRPVGPGAAWSASQLPFERDDNIYDLRGARSFPTLEDEVRSDVLPCTPPSFEEATTASIATTLSSSTSLSIPEHSPSDTSEHPRYRRHTQSSQDGTNQEDDQQTITVEVVRRRDSEPALLAPQPSPETSEAPEVTAEASGSSVPASPRILLDSDCTSQASGCASRSSVDEDEEVPITEIYFSAESLA
SIO_010081: pip5k1ca
subclass of: SO_0000673
so part of: pip5k1ca
location: complement(join(630523..630543,630943..631099,632605..632703,632951..632980,633165..633306,633585..633746,634035..634119,636099..636147,636773..636856,637135..637340,639787..640086,642935..643087,644764..644881,645184..645314,645627..645713,645859..645887,650132..650261))
location: region:630523-650261:-1
so has part: feature:650132-650261:-1:exon
so has part: feature:645859-645887:-1:exon
so has part: feature:645627-645713:-1:exon
so has part: feature:645184-645314:-1:exon
so has part: feature:644764-644881:-1:exon
so has part: feature:642935-643087:-1:exon
so has part: feature:639787-640086:-1:exon
so has part: feature:637135-637340:-1:exon
so has part: feature:636773-636856:-1:exon
so has part: feature:636099-636147:-1:exon
so has part: feature:634035-634119:-1:exon
so has part: feature:633585-633746:-1:exon
so has part: feature:633165-633306:-1:exon
so has part: feature:632951-632980:-1:exon
so has part: feature:632605-632703:-1:exon
so has part: feature:630943-631099:-1:exon
so has part: feature:630523-630543:-1:exon

XP_026861227.2
type: Protein
SIO_000068: ncbiprotein

position:630523:-1
position: 630523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650132-650261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645859-645887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645627-645713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645184-645314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644764-644881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642935-643087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639787-640086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637135-637340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636773-636856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636099-636147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634035-634119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633585-633746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633165-633306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632951-632980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632605-632703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630943-631099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:630523-630543:-1:exon

trnag-gcc
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: trnag-gcc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 654022..654092
location: region:654022-654092:1
so has part: feature:654022-654092:1:exon
subclass of: SO_0000663

113574558
type: Gene
SIO_000068: ncbigene

position:654022:1
position: 654022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654092:1
position: 654092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654022-654092:1:exon

trnag-gcc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8005
gene: trnag-gcc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:654054..654056,aa:Gly,seq:gcc)
SIO_010081: trnag-gcc
subclass of: SO_0000673
so part of: trnag-gcc
location: 654022..654092
location: region:654022-654092:1
so has part: feature:654022-654092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654022-654092:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 654436..654507
location: region:654436-654507:1
so has part: feature:654436-654507:1:exon
subclass of: SO_0000663

113574561
type: Gene
SIO_000068: ncbigene

position:654436:1
position: 654436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654507:1
position: 654507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654436-654507:1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8005
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:654469..654471,aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: 654436..654507
location: region:654436-654507:1
so has part: feature:654436-654507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654436-654507:1:exon

trnag-gcc
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: trnag-gcc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 654645..654715
location: region:654645-654715:1
so has part: feature:654645-654715:1:exon
subclass of: SO_0000663

113574560
type: Gene
SIO_000068: ncbigene

position:654645:1
position: 654645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654715:1
position: 654715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654645-654715:1:exon

trnag-gcc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8005
gene: trnag-gcc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:654677..654679,aa:Gly,seq:gcc)
SIO_010081: trnag-gcc
subclass of: SO_0000673
so part of: trnag-gcc
location: 654645..654715
location: region:654645-654715:1
so has part: feature:654645-654715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654645-654715:1:exon

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 654857..654930
location: region:654857-654930:1
so has part: feature:654857-654930:1:exon
subclass of: SO_0000663

113574559
type: Gene
SIO_000068: ncbigene

position:654857:1
position: 654857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654930:1
position: 654930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654857-654930:1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8005
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:654891..654893,aa:Ile,seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: 654857..654930
location: region:654857-654930:1
so has part: feature:654857-654930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654857-654930:1:exon

rpp21
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: rpp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 655121..656639
location: region:655121-656639:1
so has part: feature:655121-656639:1:exon
subclass of: SO_0000010

113574523
type: Gene
SIO_000068: ncbigene

position:655121:1
position: 655121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656639:1
position: 656639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655121-656639:1:exon

rpp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rpp21
product: ribonuclease P 21 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005512.2
SIO_010081: rpp21
subclass of: SO_0000673
so part of: rpp21
location: join(655121..655316,655425..655525,655653..655735,655877..656011,656139..656639)
location: region:655121-656639:1
so has part: feature:655121-655316:1:exon
so has part: feature:655425-655525:1:exon
so has part: feature:655653-655735:1:exon
so has part: feature:655877-656011:1:exon
so has part: feature:656139-656639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655121-655316:1:exon

position:655316:1
position: 655316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655425-655525:1:exon

position:655425:1
position: 655425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655525:1
position: 655525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:655653-655735:1:exon

position:655653:1
position: 655653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655735:1
position: 655735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:655877-656011:1:exon

position:655877:1
position: 655877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656011:1
position: 656011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:656139-656639:1:exon

position:656139:1
position: 656139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rpp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rpp21
product: ribonuclease P 21 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_027005511.2
SIO_010081: rpp21
subclass of: SO_0000673
so part of: rpp21
location: join(655125..655316,655425..655525,655653..655735,655877..656029,656139..656639)
location: region:655125-656639:1
so has part: feature:655125-655316:1:exon
so has part: feature:655425-655525:1:exon
so has part: feature:655653-655735:1:exon
so has part: feature:655877-656029:1:exon
so has part: feature:656139-656639:1:exon

position:655125:1
position: 655125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655125-655316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655425-655525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655653-655735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655877-656029:1:exon

position:656029:1
position: 656029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:656139-656639:1:exon

rpp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rpp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p21 isoform X1
translation: MAGSIKDKEAFQRLNFLYQAAHCVLAQNPENIELARFYCFTQKTIAKRLVLRQDPSVKRTICKKCCSLLIPGVTSTVRQRRGSRRQRVTVVRCLSCGFTKTFQNNPKYHLWVDQPEAQLENLPQPGTDGVSDVNPSSKALALVDKSDQPSMTTSTHNPESLKSKS
SIO_010081: rpp21
subclass of: SO_0000673
so part of: rpp21
location: join(655260..655316,655425..655525,655653..655735,655877..656029,656139..656242)
location: region:655260-656242:1
so has part: feature:655260-655316:1:exon
so has part: feature:655425-655525:1:exon
so has part: feature:655653-655735:1:exon
so has part: feature:655877-656029:1:exon
so has part: feature:656139-656242:1:exon

XP_026861312.1
type: Protein
SIO_000068: ncbiprotein

position:655260:1
position: 655260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656242:1
position: 656242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655260-655316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655425-655525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655653-655735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655877-656029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656139-656242:1:exon

rpp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rpp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p21 isoform X2
translation: MAGSIKDKEAFQRLNFLYQAAHCVLAQNPENIELARFYCFTQKTIAKRLVLRQDPSVKRTICKKCCSLLIPGVTSTVRQRRGSRRQRVTVVRCLSCGFTKTFQNNPKYHLWVDQPEAQLENLPQPDVNPSSKALALVDKSDQPSMTTSTHNPESLKSKS
SIO_010081: rpp21
subclass of: SO_0000673
so part of: rpp21
location: join(655260..655316,655425..655525,655653..655735,655877..656011,656139..656242)
location: region:655260-656242:1
so has part: feature:655260-655316:1:exon
so has part: feature:655425-655525:1:exon
so has part: feature:655653-655735:1:exon
so has part: feature:655877-656011:1:exon
so has part: feature:656139-656242:1:exon

XP_026861313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:655260-655316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655425-655525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655653-655735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655877-656011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656139-656242:1:exon

aqp12
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: aqp12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(656957..658464)
location: region:656957-658464:-1
so has part: feature:656957-658464:-1:exon
subclass of: SO_0000010

113574548
type: Gene
SIO_000068: ncbigene

position:656957:-1
position: 656957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658464:-1
position: 658464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656957-658464:-1:exon

aqp12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: aqp12
product: aquaporin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027005549.2
SIO_010081: aqp12
subclass of: SO_0000673
so part of: aqp12
location: complement(join(656957..657075,657396..657512,657867..658464))
location: region:656957-658464:-1
so has part: feature:657867-658464:-1:exon
so has part: feature:657396-657512:-1:exon
so has part: feature:656957-657075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657867-658464:-1:exon

position:657867:-1
position: 657867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657396-657512:-1:exon

position:657396:-1
position: 657396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657512:-1
position: 657512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656957-657075:-1:exon

position:657075:-1
position: 657075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

aqp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: aqp12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aquaporin 12
translation: MSVLNITLGYFIAIVAISACTRALVAWQWPKWSFLAEFIAAFSLAASRLEVQTISEVGQWAVGLGPEVTLTLLFLTITVHAVIMQGVSGNPSVTVMRFLQKDGEAVAVLLSLASQLAGAQLALLLAGWYWAMELTDMHMLKNLMAAECSTSLRVPLIQGATAEAVSALIFHLAHLSLEHRSQLLQIPSLTLLLTFLYYAGSNYTSAYVNPSLASALTFTCPGHTFLEYVLVYWLGPLIGMTLALLLYTGNIPALFTKNLLYSKKTRFRLPKGRMSAE
SIO_010081: aqp12
subclass of: SO_0000673
so part of: aqp12
location: complement(join(656957..657075,657396..657512,657867..658464))
location: region:656957-658464:-1
so has part: feature:657867-658464:-1:exon
so has part: feature:657396-657512:-1:exon
so has part: feature:656957-657075:-1:exon

XP_026861350.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:657867-658464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657396-657512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656957-657075:-1:exon

trnam-cau
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: trnam-cau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 659255..659327
location: region:659255-659327:1
so has part: feature:659255-659327:1:exon
subclass of: SO_0000663

113574557
type: Gene
SIO_000068: ncbigene

position:659255:1
position: 659255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659327:1
position: 659327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659255-659327:1:exon

trnam-cau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8005
gene: trnam-cau
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:659288..659290,aa:Met,seq:cat)
SIO_010081: trnam-cau
subclass of: SO_0000673
so part of: trnam-cau
location: 659255..659327
location: region:659255-659327:1
so has part: feature:659255-659327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659255-659327:1:exon

gpc5b
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: gpc5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 660362..695059
location: region:660362-695059:1
so has part: feature:660362-695059:1:exon
subclass of: SO_0000010

113574549
type: Gene
SIO_000068: ncbigene

position:660362:1
position: 660362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695059:1
position: 695059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660362-695059:1:exon

gpc5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: gpc5b
product: glypican 5b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027005550.2
SIO_010081: gpc5b
subclass of: SO_0000673
so part of: gpc5b
location: join(660362..660991,662013..662174,668952..669655,672160..672332,672626..672685,672944..673066,680656..680776,684319..684457,694791..695059)
location: region:660362-695059:1
so has part: feature:660362-660991:1:exon
so has part: feature:662013-662174:1:exon
so has part: feature:668952-669655:1:exon
so has part: feature:672160-672332:1:exon
so has part: feature:672626-672685:1:exon
so has part: feature:672944-673066:1:exon
so has part: feature:680656-680776:1:exon
so has part: feature:684319-684457:1:exon
so has part: feature:694791-695059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660362-660991:1:exon

position:660991:1
position: 660991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662013-662174:1:exon

position:662013:1
position: 662013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662174:1
position: 662174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668952-669655:1:exon

position:668952:1
position: 668952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669655:1
position: 669655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672160-672332:1:exon

position:672160:1
position: 672160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672332:1
position: 672332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:672626-672685:1:exon

position:672626:1
position: 672626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672685:1
position: 672685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:672944-673066:1:exon

position:672944:1
position: 672944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673066:1
position: 673066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:680656-680776:1:exon

position:680656:1
position: 680656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680776:1
position: 680776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:684319-684457:1:exon

position:684319:1
position: 684319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684457:1
position: 684457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:694791-695059:1:exon

position:694791:1
position: 694791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gpc5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: gpc5b
product: glypican 5b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035523406.1
SIO_010081: gpc5b
subclass of: SO_0000673
so part of: gpc5b
location: join(660461..660991,662013..662174,668952..669655,672160..672332,672605..672685,672944..673066,680656..680776,684319..684457,694791..695059)
location: region:660461-695059:1
so has part: feature:660461-660991:1:exon
so has part: feature:662013-662174:1:exon
so has part: feature:668952-669655:1:exon
so has part: feature:672160-672332:1:exon
so has part: feature:672605-672685:1:exon
so has part: feature:672944-673066:1:exon
so has part: feature:680656-680776:1:exon
so has part: feature:684319-684457:1:exon
so has part: feature:694791-695059:1:exon

position:660461:1
position: 660461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660461-660991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662013-662174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668952-669655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672160-672332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672605-672685:1:exon

position:672605:1
position: 672605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:672944-673066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680656-680776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:684319-684457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694791-695059:1:exon

gpc5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: gpc5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-5b isoform X1
translation: MFRKILPRVWICWIFVTFASTWGIYFTGAHSCHEVKTAFQLRHIGPLRWVPETAATDADLQICKHQGPTCCTRKMEQSYDAAARRDTLQNILSYSFELKYLILGHASAYRDTFYSLLSFTLNHTLSLFDLAYEPIAREARPLVITLYSDLALYLYGDAGISIESSVHHFYDVLFPLVYRHLVNPGLRSSSWSAEGAECLRATRPDVNPFGPHPQVLAQGLAQALAGGRALARALAAGADVLNATETVGMARECGRALVRMHYCPHCRGLTLIRPCGGLCLNVMRGCLAGLAELQAPWSRYVALLEGLSAALAGGHELELALLGIRERINDAILSAQLHGPHLSAVVDKVCGPLTESVSSTRADGPPTSTLSTVKLQHPIPPASPAGGADPGGEQHGHVALTKRRTYDRCRSLPLKPSKNDKPRSLKKLSKEFMGYIQRYKAFFSTLPELLCEGEMVVDDYTCWGGEDVVESYTDRVVGSGLLAQRHNPEMKVRGVDPVLVEAKERLEQFNQGIWHETGLGVDLHEQLDAGSGNTMETSGECDDEDGCQGSGEDEDAPGGPLPSFQPPDFRARPGMPASAAARPEAASPLLLSLPLLPLLLLSCLGRASA
SIO_010081: gpc5b
subclass of: SO_0000673
so part of: gpc5b
location: join(660823..660991,662013..662174,668952..669655,672160..672332,672605..672685,672944..673066,680656..680776,684319..684457,694791..694948)
location: region:660823-694948:1
so has part: feature:660823-660991:1:exon
so has part: feature:662013-662174:1:exon
so has part: feature:668952-669655:1:exon
so has part: feature:672160-672332:1:exon
so has part: feature:672605-672685:1:exon
so has part: feature:672944-673066:1:exon
so has part: feature:680656-680776:1:exon
so has part: feature:684319-684457:1:exon
so has part: feature:694791-694948:1:exon

XP_035379299.1
type: Protein
SIO_000068: ncbiprotein

position:660823:1
position: 660823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694948:1
position: 694948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660823-660991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662013-662174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668952-669655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672160-672332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672605-672685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672944-673066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680656-680776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:684319-684457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694791-694948:1:exon

gpc5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: gpc5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-5b isoform X2
translation: MFRKILPRVWICWIFVTFASTWGIYFTGAHSCHEVKTAFQLRHIGPLRWVPETAATDADLQICKHQGPTCCTRKMEQSYDAAARRDTLQNILSYSFELKYLILGHASAYRDTFYSLLSFTLNHTLSLFDLAYEPIAREARPLVITLYSDLALYLYGDAGISIESSVHHFYDVLFPLVYRHLVNPGLRSSSWSAEGAECLRATRPDVNPFGPHPQVLAQGLAQALAGGRALARALAAGADVLNATETVGMARECGRALVRMHYCPHCRGLTLIRPCGGLCLNVMRGCLAGLAELQAPWSRYVALLEGLSAALAGGHELELALLGIRERINDAILSAQLHGPHLSAVVDKVCGPLTESVSSTRADGPPTSTLSTVKLQHPIPPASPAGGADPGGEQHGHVALTKRSLPLKPSKNDKPRSLKKLSKEFMGYIQRYKAFFSTLPELLCEGEMVVDDYTCWGGEDVVESYTDRVVGSGLLAQRHNPEMKVRGVDPVLVEAKERLEQFNQGIWHETGLGVDLHEQLDAGSGNTMETSGECDDEDGCQGSGEDEDAPGGPLPSFQPPDFRARPGMPASAAARPEAASPLLLSLPLLPLLLLSCLGRASA
SIO_010081: gpc5b
subclass of: SO_0000673
so part of: gpc5b
location: join(660823..660991,662013..662174,668952..669655,672160..672332,672626..672685,672944..673066,680656..680776,684319..684457,694791..694948)
location: region:660823-694948:1
so has part: feature:660823-660991:1:exon
so has part: feature:662013-662174:1:exon
so has part: feature:668952-669655:1:exon
so has part: feature:672160-672332:1:exon
so has part: feature:672626-672685:1:exon
so has part: feature:672944-673066:1:exon
so has part: feature:680656-680776:1:exon
so has part: feature:684319-684457:1:exon
so has part: feature:694791-694948:1:exon

XP_026861351.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660823-660991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662013-662174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668952-669655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672160-672332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672626-672685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672944-673066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680656-680776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:684319-684457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694791-694948:1:exon

gpc1a
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: gpc1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 697248..721064
location: region:697248-721064:1
so has part: feature:697248-721064:1:exon
subclass of: SO_0000010

113574519
type: Gene
SIO_000068: ncbigene

position:697248:1
position: 697248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721064:1
position: 721064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697248-721064:1:exon

gpc1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: gpc1a
product: glypican 1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027005504.2
SIO_010081: gpc1a
subclass of: SO_0000673
so part of: gpc1a
location: join(697248..697829,712161..712319,713773..714173,716563..716728,717098..717228,717643..717780,717940..718073,718550..718725,719099..721064)
location: region:697248-721064:1
so has part: feature:697248-697829:1:exon
so has part: feature:712161-712319:1:exon
so has part: feature:713773-714173:1:exon
so has part: feature:716563-716728:1:exon
so has part: feature:717098-717228:1:exon
so has part: feature:717643-717780:1:exon
so has part: feature:717940-718073:1:exon
so has part: feature:718550-718725:1:exon
so has part: feature:719099-721064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697248-697829:1:exon

position:697829:1
position: 697829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712161-712319:1:exon

position:712161:1
position: 712161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712319:1
position: 712319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:713773-714173:1:exon

position:713773:1
position: 713773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714173:1
position: 714173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716563-716728:1:exon

position:716563:1
position: 716563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716728:1
position: 716728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717098-717228:1:exon

position:717098:1
position: 717098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717228:1
position: 717228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717643-717780:1:exon

position:717643:1
position: 717643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717780:1
position: 717780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:717940-718073:1:exon

position:717940:1
position: 717940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718073:1
position: 718073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:718550-718725:1:exon

position:718550:1
position: 718550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718725:1
position: 718725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:719099-721064:1:exon

position:719099:1
position: 719099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gpc1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: gpc1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-1
translation: MDLTPVTLLVCLIAVCLSADNTGVKARSCADVRQFYSGKGFTLNGVPQSEISGEHLRVCPQGYTCCTSAMEETLSNLSRRELEGLVREAGRSVQASLNAQYRSFDTYFLELLNGSERWLEEAFVKALGTLYGPNAGILRELYAELRRYYRGAALNLDEALDEFWTRLLERLLKASEPAVAASLVSDEFLECASKQTETLRPFGDAPRDLKSRLARVFVAARAFVQGLNVAGEVVRKVSQVPLSPECNRAIMRLVYCPHCRGLGSIKPCSNYCRNVMKGCLANQADLDTEWQNLVDTMLQVAFSFGTEPSMDVVLHSIPVRISEAVLHLQENMEHYISKVLQACGDRGEEGTQSSVSEEPKKKESTVTALEYKPSSSAAVRLEVQVTDVSSKLKEMQLYWVQLPWALCNSKAASGSSGDDDCWNGVTKARYLPELMGDGLANQINNPEVDIDITKPDMTIRQQIMQLKIMSNRLKNALDGNDVDFQDTSDDISGSGSGMCSEKFCVRGRPPVFGPKLDTPKLDAYGPENKRVKGSGSRLRPCVSLVFLLLLSFLLRR
SIO_010081: gpc1a
subclass of: SO_0000673
so part of: gpc1a
location: join(697673..697829,712161..712319,713773..714173,716563..716728,717098..717228,717643..717780,717940..718073,718550..718725,719099..719307)
location: region:697673-719307:1
so has part: feature:697673-697829:1:exon
so has part: feature:712161-712319:1:exon
so has part: feature:713773-714173:1:exon
so has part: feature:716563-716728:1:exon
so has part: feature:717098-717228:1:exon
so has part: feature:717643-717780:1:exon
so has part: feature:717940-718073:1:exon
so has part: feature:718550-718725:1:exon
so has part: feature:719099-719307:1:exon

XP_026861305.2
type: Protein
SIO_000068: ncbiprotein

position:697673:1
position: 697673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719307:1
position: 719307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697673-697829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712161-712319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713773-714173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716563-716728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717098-717228:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717643-717780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717940-718073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:718550-718725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:719099-719307:1:exon

ankmy1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: ankmy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(720661..731683)
location: region:720661-731683:-1
so has part: feature:720661-731683:-1:exon
subclass of: SO_0000010

113574517
type: Gene
SIO_000068: ncbigene

position:720661:-1
position: 720661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731683:-1
position: 731683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720661-731683:-1:exon

ankmy1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ankmy1
product: ankyrin repeat and MYND domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027005499.2
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(720661..721210,722463..722617,722750..722788,722883..722988,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726470,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731249,731382..731682))
location: region:720661-731682:-1
so has part: feature:731382-731682:-1:exon
so has part: feature:731090-731249:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726470:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722883-722988:-1:exon
so has part: feature:722750-722788:-1:exon
so has part: feature:722463-722617:-1:exon
so has part: feature:720661-721210:-1:exon

position:731682:-1
position: 731682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731382-731682:-1:exon

position:731382:-1
position: 731382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731090-731249:-1:exon

position:731090:-1
position: 731090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731249:-1
position: 731249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730709-730855:-1:exon

position:730709:-1
position: 730709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730855:-1
position: 730855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730234-730419:-1:exon

position:730234:-1
position: 730234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730419:-1
position: 730419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:729733-730004:-1:exon

position:729733:-1
position: 729733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730004:-1
position: 730004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:728904-729120:-1:exon

position:728904:-1
position: 728904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729120:-1
position: 729120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:727729-727905:-1:exon

position:727729:-1
position: 727729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727905:-1
position: 727905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:726721-727319:-1:exon

position:726721:-1
position: 726721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727319:-1
position: 727319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:726305-726470:-1:exon

position:726305:-1
position: 726305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726470:-1
position: 726470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:725172-725312:-1:exon

position:725172:-1
position: 725172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725312:-1
position: 725312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:724722-724859:-1:exon

position:724722:-1
position: 724722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724859:-1
position: 724859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:724260-724367:-1:exon

position:724260:-1
position: 724260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724367:-1
position: 724367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:723952-724083:-1:exon

position:723952:-1
position: 723952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724083:-1
position: 724083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:723677-723790:-1:exon

position:723677:-1
position: 723677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723790:-1
position: 723790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:723196-723361:-1:exon

position:723196:-1
position: 723196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723361:-1
position: 723361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:722883-722988:-1:exon

position:722883:-1
position: 722883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722988:-1
position: 722988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:722750-722788:-1:exon

position:722750:-1
position: 722750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722788:-1
position: 722788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:722463-722617:-1:exon

position:722463:-1
position: 722463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722617:-1
position: 722617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:720661-721210:-1:exon

position:721210:-1
position: 721210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ankmy1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ankmy1
product: ankyrin repeat and MYND domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027005500.2
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(720661..721210,722463..722617,722750..722788,722883..722949,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731249,731382..731682))
location: region:720661-731682:-1
so has part: feature:731382-731682:-1:exon
so has part: feature:731090-731249:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722883-722949:-1:exon
so has part: feature:722750-722788:-1:exon
so has part: feature:722463-722617:-1:exon
so has part: feature:720661-721210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731382-731682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731090-731249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726305-726476:-1:exon

position:726476:-1
position: 726476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722883-722949:-1:exon

position:722949:-1
position: 722949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:722750-722788:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:722463-722617:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720661-721210:-1:exon

ankmy1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ankmy1
product: ankyrin repeat and MYND domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027005501.2
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(720661..721210,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731249,731382..731681))
location: region:720661-731681:-1
so has part: feature:731382-731681:-1:exon
so has part: feature:731090-731249:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:720661-721210:-1:exon

position:731681:-1
position: 731681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731382-731681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731090-731249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:720661-721210:-1:exon

ankmy1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ankmy1
product: ankyrin repeat and MYND domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027005498.2
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(720661..721210,722463..722617,722750..722788,722883..722988,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731249,731382..731681))
location: region:720661-731681:-1
so has part: feature:731382-731681:-1:exon
so has part: feature:731090-731249:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722883-722988:-1:exon
so has part: feature:722750-722788:-1:exon
so has part: feature:722463-722617:-1:exon
so has part: feature:720661-721210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731382-731681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731090-731249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722883-722988:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722750-722788:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:722463-722617:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720661-721210:-1:exon

ankmy1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ankmy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X2
translation: MTLPRPTSVRSGLCVNQRNGRGIQEWPDGSKYEGEFVNGLKQGAGVFTWPNGEFYEGSFYKDYRHGCGTYSWPDGGQFTGKFYLNRKEGYGLQRFHDGTTFQGLHHADERFGPGVTTYLDGRQDVGLWYRHWLLRLPTCVGEGFTLRDFPEYMALVPKQQLQTQVFAQASPTQSRRVNSMAPPWDCGPPLQQDEWFVLPPGIESYSTDSDHLPTPQSRRQELDLLFFGRGDIHMPSFSDDPPLQQQMEAHIHTHRFEAEGLDWDVAAVLAMNREGFGPKGPVERTSEKLLRAASLGLYQNVYDILFDGKVHPDVADARGCTALLAATVSCHDDVIHLLLDSGADVNMVNEEGMSALAASCVLYYPFHSLHETVAEKVSQRDALKPEIKASSTMENSPQQKAAGPLTESPGNDSDRKLFLTDSLFVTEQVERVPSGESVGCAEDVPGHAEERKRPSEREKAPWAGNGEAAELELLEEVRSIQLLNIHGNIHVGVQAKGEEEDYRRSVEDHVDLEAEETDWRNGGRAAPETIYDSPRSVVSSVVNSVVSSVVTEDLMQQMAEVPCHKDKDSTTEPQETVHKMPVMLPLCQWTTMQLLLTRGADPNASSVPMPVIFLAIKAGHTEGVQRLLESGARTDMPLPTQRKGLYPLHVAAGLPGPKGPKITELLLLAAADPDVKAQDAGEVCELDESMADVQDGSSLGSASPACFSTVILTTPEDGGRTPLHVACQRESDYMNARDVVSILLTHKASTIHLWSGHSPLSLAIASGNDLAVDELLAARADPNLPLSRHIGSALCAAATLSYDRGHLAQSRIKLVEKLIKAGANILMPVVVGEGRRCAIGTALDYAHYFFNQDWRIARAPYHALNQFQRQTYNARRQLLGMMGDLLRLAAVGMETQRLKAEQSQGIHSVGPKEKFVFTGTGATPPGNQVGVTDTSSPTESHLRSGTESETGTMIVRKPPFKYCYQCGRSIWVVLTPCSRCHEVFYCSKTCKMKSWSERHREECLRVPGTGQTRYSSGIRLQPFSEKSSQKGRDFQVKTDREYSSTPATHSHRHDPEENYSFI
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(721044..721210,722463..722617,722750..722788,722883..722988,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726470,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731248))
location: region:721044-731248:-1
so has part: feature:731090-731248:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726470:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722883-722988:-1:exon
so has part: feature:722750-722788:-1:exon
so has part: feature:722463-722617:-1:exon
so has part: feature:721044-721210:-1:exon

XP_026861300.2
type: Protein
SIO_000068: ncbiprotein

position:721044:-1
position: 721044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731248:-1
position: 731248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731090-731248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726305-726470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:722883-722988:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722750-722788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722463-722617:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721044-721210:-1:exon

ankmy1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ankmy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X4
translation: MTLPRPTSVRSGLCVNQRNGRGIQEWPDGSKYEGEFVNGLKQGAGVFTWPNGEFYEGSFYKDYRHGCGTYSWPDGGQFTGKFYLNRKEGYGLQRFHDGTTFQGLHHADERFGPGVTTYLDGRQDVGLWYRHWLLRLPTCVGEGFTLRDFPEYMALVPKQQLQTQVFAQASPTQSRRVNSMAPPWDCGPPLQQDEWFVLPPGIESYSTDSDHLPTPQSRRQELDLLFFGRGDIHMPSFSDDPPLQQQMEAHIHTHRFEAEGLDWDVAAVLAMNREGFGPKGPVERTSEKLLRAASLGLYQNVYDILFDGKVHPDVADARGCTALLAATVSCHDDVIHLLLDSGADVNMVNEEGMSALAASCVLYYPFHSLHETVAEKVSQRDALKPEIKASSTMENSPQQKAAGPLTESPGNDSDRKLFLTDSLFVTEQVERVPSGESVGCAEDVPGHAEERKRPSEREKAPWAGNGEAAELELLEEVRSIQLLNIHGNIHVGVQAKGEEEDYRRSVEDHVDLEAEETDWRNGGRAAPETIYDSPRSVVSSVVNSVVSSVVTEDLMQQMAEVPCHKDKDSTTEPQETVHKMPVMLPLHRCQWTTMQLLLTRGADPNASSVPMPVIFLAIKAGHTEGVQRLLESGARTDMPLPTQRKGLYPLHVAAGLPGPKGPKITELLLLAAADPDVKAQDAGEVCELDESMADVQDGSSLGSASPACFSTVILTTPEDGGRTPLHVACQRESDYMNARDVVSILLTHKASTIHLWSGHSPLSLAIASGNDLAVDELLAARADPNLPLSRHIGSALCAAATLSYDRGHLAQSRIKLVEKLIKAGANILMPVVVGEGRRCAIGTALDYAHYFFNQDWRIARAPYHALNQFQRQTYNARRQLLGMMGDLLRLAAVGMETQRLKAEQSQGIHRTGQTRYSSGIRLQPFSEKSSQKGRDFQVKTDREYSSTPATHSHRHDPEENYSFI
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(721044..721210,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731248))
location: region:721044-731248:-1
so has part: feature:731090-731248:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:721044-721210:-1:exon

XP_026861302.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:731090-731248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721044-721210:-1:exon

ankmy1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ankmy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X3
translation: MTLPRPTSVRSGLCVNQRNGRGIQEWPDGSKYEGEFVNGLKQGAGVFTWPNGEFYEGSFYKDYRHGCGTYSWPDGGQFTGKFYLNRKEGYGLQRFHDGTTFQGLHHADERFGPGVTTYLDGRQDVGLWYRHWLLRLPTCVGEGFTLRDFPEYMALVPKQQLQTQVFAQASPTQSRRVNSMAPPWDCGPPLQQDEWFVLPPGIESYSTDSDHLPTPQSRRQELDLLFFGRGDIHMPSFSDDPPLQQQMEAHIHTHRFEAEGLDWDVAAVLAMNREGFGPKGPVERTSEKLLRAASLGLYQNVYDILFDGKVHPDVADARGCTALLAATVSCHDDVIHLLLDSGADVNMVNEEGMSALAASCVLYYPFHSLHETVAEKVSQRDALKPEIKASSTMENSPQQKAAGPLTESPGNDSDRKLFLTDSLFVTEQVERVPSGESVGCAEDVPGHAEERKRPSEREKAPWAGNGEAAELELLEEVRSIQLLNIHGNIHVGVQAKGEEEDYRRSVEDHVDLEAEETDWRNGGRAAPETIYDSPRSVVSSVVNSVVSSVVTEDLMQQMAEVPCHKDKDSTTEPQETVHKMPVMLPLHRCQWTTMQLLLTRGADPNASSVPMPVIFLAIKAGHTEGVQRLLESGARTDMPLPTQRKGLYPLHVAAGLPGPKGPKITELLLLAAADPDVKAQDAGEVCELDESMADVQDGSSLGSASPACFSTVILTTPEDGGRTPLHVACQRESDYMNARDVVSILLTHKASTIHLWSGHSPLSLAIASGNDLAVDELLAARADPNLPLSRHIGSALCAAATLSYDRGHLAQSRIKLVEKLIKAGANILMPVVVGEGRRCAIGTALDYAHYFFNQDWRIARAPYHALNQFQRQTYNARRQLLGMMGDLLRLAAVGMETQRLKAEQSQGIHRATPPGNQVGVTDTSSPTESHLRSGTESETGTMIVRKPPFKYCYQCGRSIWVVLTPCSRCHEVFYCSKTCKMKSWSERHREECLRVPGTGQTRYSSGIRLQPFSEKSSQKGRDFQVKTDREYSSTPATHSHRHDPEENYSFI
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(721044..721210,722463..722617,722750..722788,722883..722949,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731248))
location: region:721044-731248:-1
so has part: feature:731090-731248:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722883-722949:-1:exon
so has part: feature:722750-722788:-1:exon
so has part: feature:722463-722617:-1:exon
so has part: feature:721044-721210:-1:exon

XP_026861301.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:731090-731248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:722883-722949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722750-722788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722463-722617:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721044-721210:-1:exon

ankmy1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ankmy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X1
translation: MTLPRPTSVRSGLCVNQRNGRGIQEWPDGSKYEGEFVNGLKQGAGVFTWPNGEFYEGSFYKDYRHGCGTYSWPDGGQFTGKFYLNRKEGYGLQRFHDGTTFQGLHHADERFGPGVTTYLDGRQDVGLWYRHWLLRLPTCVGEGFTLRDFPEYMALVPKQQLQTQVFAQASPTQSRRVNSMAPPWDCGPPLQQDEWFVLPPGIESYSTDSDHLPTPQSRRQELDLLFFGRGDIHMPSFSDDPPLQQQMEAHIHTHRFEAEGLDWDVAAVLAMNREGFGPKGPVERTSEKLLRAASLGLYQNVYDILFDGKVHPDVADARGCTALLAATVSCHDDVIHLLLDSGADVNMVNEEGMSALAASCVLYYPFHSLHETVAEKVSQRDALKPEIKASSTMENSPQQKAAGPLTESPGNDSDRKLFLTDSLFVTEQVERVPSGESVGCAEDVPGHAEERKRPSEREKAPWAGNGEAAELELLEEVRSIQLLNIHGNIHVGVQAKGEEEDYRRSVEDHVDLEAEETDWRNGGRAAPETIYDSPRSVVSSVVNSVVSSVVTEDLMQQMAEVPCHKDKDSTTEPQETVHKMPVMLPLHRCQWTTMQLLLTRGADPNASSVPMPVIFLAIKAGHTEGVQRLLESGARTDMPLPTQRKGLYPLHVAAGLPGPKGPKITELLLLAAADPDVKAQDAGEVCELDESMADVQDGSSLGSASPACFSTVILTTPEDGGRTPLHVACQRESDYMNARDVVSILLTHKASTIHLWSGHSPLSLAIASGNDLAVDELLAARADPNLPLSRHIGSALCAAATLSYDRGHLAQSRIKLVEKLIKAGANILMPVVVGEGRRCAIGTALDYAHYFFNQDWRIARAPYHALNQFQRQTYNARRQLLGMMGDLLRLAAVGMETQRLKAEQSQGIHSVGPKEKFVFTGTGATPPGNQVGVTDTSSPTESHLRSGTESETGTMIVRKPPFKYCYQCGRSIWVVLTPCSRCHEVFYCSKTCKMKSWSERHREECLRVPGTGQTRYSSGIRLQPFSEKSSQKGRDFQVKTDREYSSTPATHSHRHDPEENYSFI
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(721044..721210,722463..722617,722750..722788,722883..722988,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731248))
location: region:721044-731248:-1
so has part: feature:731090-731248:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722883-722988:-1:exon
so has part: feature:722750-722788:-1:exon
so has part: feature:722463-722617:-1:exon
so has part: feature:721044-721210:-1:exon

XP_026861299.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:731090-731248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:722883-722988:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722750-722788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722463-722617:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721044-721210:-1:exon

ankmy1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ankmy1
product: ankyrin repeat and MYND domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027005502.2
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(722530..722617,722750..722788,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731249,731382..731683))
location: region:722530-731683:-1
so has part: feature:731382-731683:-1:exon
so has part: feature:731090-731249:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722750-722788:-1:exon
so has part: feature:722530-722617:-1:exon

position:722530:-1
position: 722530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731382-731683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731090-731249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722750-722788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722530-722617:-1:exon

ankmy1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ankmy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X5
translation: MTLPRPTSVRSGLCVNQRNGRGIQEWPDGSKYEGEFVNGLKQGAGVFTWPNGEFYEGSFYKDYRHGCGTYSWPDGGQFTGKFYLNRKEGYGLQRFHDGTTFQGLHHADERFGPGVTTYLDGRQDVGLWYRHWLLRLPTCVGEGFTLRDFPEYMALVPKQQLQTQVFAQASPTQSRRVNSMAPPWDCGPPLQQDEWFVLPPGIESYSTDSDHLPTPQSRRQELDLLFFGRGDIHMPSFSDDPPLQQQMEAHIHTHRFEAEGLDWDVAAVLAMNREGFGPKGPVERTSEKLLRAASLGLYQNVYDILFDGKVHPDVADARGCTALLAATVSCHDDVIHLLLDSGADVNMVNEEGMSALAASCVLYYPFHSLHETVAEKVSQRDALKPEIKASSTMENSPQQKAAGPLTESPGNDSDRKLFLTDSLFVTEQVERVPSGESVGCAEDVPGHAEERKRPSEREKAPWAGNGEAAELELLEEVRSIQLLNIHGNIHVGVQAKGEEEDYRRSVEDHVDLEAEETDWRNGGRAAPETIYDSPRSVVSSVVNSVVSSVVTEDLMQQMAEVPCHKDKDSTTEPQETVHKMPVMLPLHRCQWTTMQLLLTRGADPNASSVPMPVIFLAIKAGHTEGVQRLLESGARTDMPLPTQRKGLYPLHVAAGLPGPKGPKITELLLLAAADPDVKAQDAGEVCELDESMADVQDGSSLGSASPACFSTVILTTPEDGGRTPLHVACQRESDYMNARDVVSILLTHKASTIHLWSGHSPLSLAIASGNDLAVDELLAARADPNLPLSRHIGSALCAAATLSYDRGHLAQSRIKLVEKLIKAGANILMPVVVGEGRRCAIGTALDYAHYFFNQDWRIARAPYHALNQFQRQTYNARRQLLGMMGDLLRLAAVGMETQRLKAEQSQGIHSLGPKARQGL
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(722757..722788,723196..723361,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731248))
location: region:722757-731248:-1
so has part: feature:731090-731248:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723196-723361:-1:exon
so has part: feature:722757-722788:-1:exon

XP_026861303.2
type: Protein
SIO_000068: ncbiprotein

position:722757:-1
position: 722757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731090-731248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723196-723361:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:722757-722788:-1:exon

ankmy1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ankmy1
product: ankyrin repeat and MYND domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027005503.2
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(723274..723519,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731249,731382..731683))
location: region:723274-731683:-1
so has part: feature:731382-731683:-1:exon
so has part: feature:731090-731249:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723274-723519:-1:exon

position:723274:-1
position: 723274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731382-731683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731090-731249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723274-723519:-1:exon

position:723519:-1
position: 723519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ankmy1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ankmy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X6
translation: MTLPRPTSVRSGLCVNQRNGRGIQEWPDGSKYEGEFVNGLKQGAGVFTWPNGEFYEGSFYKDYRHGCGTYSWPDGGQFTGKFYLNRKEGYGLQRFHDGTTFQGLHHADERFGPGVTTYLDGRQDVGLWYRHWLLRLPTCVGEGFTLRDFPEYMALVPKQQLQTQVFAQASPTQSRRVNSMAPPWDCGPPLQQDEWFVLPPGIESYSTDSDHLPTPQSRRQELDLLFFGRGDIHMPSFSDDPPLQQQMEAHIHTHRFEAEGLDWDVAAVLAMNREGFGPKGPVERTSEKLLRAASLGLYQNVYDILFDGKVHPDVADARGCTALLAATVSCHDDVIHLLLDSGADVNMVNEEGMSALAASCVLYYPFHSLHETVAEKVSQRDALKPEIKASSTMENSPQQKAAGPLTESPGNDSDRKLFLTDSLFVTEQVERVPSGESVGCAEDVPGHAEERKRPSEREKAPWAGNGEAAELELLEEVRSIQLLNIHGNIHVGVQAKGEEEDYRRSVEDHVDLEAEETDWRNGGRAAPETIYDSPRSVVSSVVNSVVSSVVTEDLMQQMAEVPCHKDKDSTTEPQETVHKMPVMLPLHRCQWTTMQLLLTRGADPNASSVPMPVIFLAIKAGHTEGVQRLLESGARTDMPLPTQRKGLYPLHVAAGLPGPKGPKITELLLLAAADPDVKAQDAGEVCELDESMADVQDGSSLGSASPACFSTVILTTPEDGGRTPLHVACQRESDYMNARDVVSILLTHKASTIHLWSGHSPLSLAIASGNDLAVDELLAARADPNLPLSRHIGSALCAAATLSYDRGHLAQSRIKLVEKLIKAGANILMPVVVGEGRRCAIGTALDYAHYFFNQVPVVGSTRA
SIO_010081: ankmy1
subclass of: SO_0000673
so part of: ankmy1
location: complement(join(723490..723519,723677..723790,723952..724083,724260..724367,724722..724859,725172..725312,726305..726476,726721..727319,727729..727905,728904..729120,729733..730004,730234..730419,730709..730855,731090..731248))
location: region:723490-731248:-1
so has part: feature:731090-731248:-1:exon
so has part: feature:730709-730855:-1:exon
so has part: feature:730234-730419:-1:exon
so has part: feature:729733-730004:-1:exon
so has part: feature:728904-729120:-1:exon
so has part: feature:727729-727905:-1:exon
so has part: feature:726721-727319:-1:exon
so has part: feature:726305-726476:-1:exon
so has part: feature:725172-725312:-1:exon
so has part: feature:724722-724859:-1:exon
so has part: feature:724260-724367:-1:exon
so has part: feature:723952-724083:-1:exon
so has part: feature:723677-723790:-1:exon
so has part: feature:723490-723519:-1:exon

XP_026861304.2
type: Protein
SIO_000068: ncbiprotein

position:723490:-1
position: 723490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731090-731248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730709-730855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730234-730419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729733-730004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728904-729120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727729-727905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726721-727319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726305-726476:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725172-725312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724722-724859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724260-724367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723952-724083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723677-723790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723490-723519:-1:exon

hsh2d
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: hsh2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(733855..737146)
location: region:733855-737146:-1
so has part: feature:733855-737146:-1:exon
subclass of: SO_0000010

113574488
type: Gene
SIO_000068: ncbigene

position:733855:-1
position: 733855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737146:-1
position: 737146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733855-737146:-1:exon

hsh2d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: hsh2d
product: hematopoietic SH2 domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027005442.2
SIO_010081: hsh2d
subclass of: SO_0000673
so part of: hsh2d
location: complement(join(733855..734703,735070..735313,735711..735899,736050..736139,736439..736562,737100..737146))
location: region:733855-737146:-1
so has part: feature:737100-737146:-1:exon
so has part: feature:736439-736562:-1:exon
so has part: feature:736050-736139:-1:exon
so has part: feature:735711-735899:-1:exon
so has part: feature:735070-735313:-1:exon
so has part: feature:733855-734703:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:737100-737146:-1:exon

position:737100:-1
position: 737100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736439-736562:-1:exon

position:736439:-1
position: 736439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736562:-1
position: 736562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:736050-736139:-1:exon

position:736050:-1
position: 736050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736139:-1
position: 736139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:735711-735899:-1:exon

position:735711:-1
position: 735711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735899:-1
position: 735899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735070-735313:-1:exon

position:735070:-1
position: 735070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735313:-1
position: 735313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:733855-734703:-1:exon

position:734703:-1
position: 734703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hsh2d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: hsh2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hematopoietic SH2 domain-containing protein homolog
translation: MAGAQDGHEAVVSWFTESQQSCIVKNGIIPEWFHGIISRKVTEEMLMTKPPGNFLIRVSESRIGYTLSYRAEDRCRHFMIAILPGNQYVIVGEKLKHCSLHDLVAHHRRAPLLPYNEVLTVACGQVGPICTQSTPYASGTEICPDNHTQAIPNPQADILEGRRPRLPKHPNISLPPVPNLGPNVSKLPATAPSLPARLYPCLETDLGALTLQDMGCPLKPVPKSTPRPIDTPLPVPPRSFSPKSEVLSTSAGDRQKQLAAGCLEWPLPSSGMQPEDSQKSQVEPKSTRISLAQCRKLFQRKKNHSEEHTYTEINDNVVEKGAGGDSNHQKLSGGLHGIAPHAGKELSAQAVVNSGSATGMLPEEYFNPPPFAPHY
SIO_010081: hsh2d
subclass of: SO_0000673
so part of: hsh2d
location: complement(join(734218..734703,735070..735313,735711..735899,736050..736139,736439..736557))
location: region:734218-736557:-1
so has part: feature:736439-736557:-1:exon
so has part: feature:736050-736139:-1:exon
so has part: feature:735711-735899:-1:exon
so has part: feature:735070-735313:-1:exon
so has part: feature:734218-734703:-1:exon

XP_026861243.2
type: Protein
SIO_000068: ncbiprotein

position:734218:-1
position: 734218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736557:-1
position: 736557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736439-736557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736050-736139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735711-735899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735070-735313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734218-734703:-1:exon

tpm4a
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: tpm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(738406..751372)
location: region:738406-751372:-1
so has part: feature:738406-751372:-1:exon
subclass of: SO_0000010

113574496
type: Gene
SIO_000068: ncbigene

position:738406:-1
position: 738406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751372:-1
position: 751372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738406-751372:-1:exon

tpm4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tpm4a
product: tropomyosin 4a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005456.2
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(738406..739186,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,749963..750088,751014..751372))
location: region:738406-751372:-1
so has part: feature:751014-751372:-1:exon
so has part: feature:749963-750088:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:738406-739186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751014-751372:-1:exon

position:751014:-1
position: 751014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749963-750088:-1:exon

position:749963:-1
position: 749963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750088:-1
position: 750088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:742827-742960:-1:exon

position:742827:-1
position: 742827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742960:-1
position: 742960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:742265-742382:-1:exon

position:742265:-1
position: 742265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742382:-1
position: 742382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:741825-741895:-1:exon

position:741825:-1
position: 741825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741895:-1
position: 741895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:741618-741693:-1:exon

position:741618:-1
position: 741618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741693:-1
position: 741693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:741239-741301:-1:exon

position:741239:-1
position: 741239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741301:-1
position: 741301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:741075-741144:-1:exon

position:741075:-1
position: 741075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741144:-1
position: 741144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:738406-739186:-1:exon

position:739186:-1
position: 739186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tpm4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tpm4a
product: tropomyosin 4a, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_027005458.2
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(738406..739186,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,747507..747950))
location: region:738406-747950:-1
so has part: feature:747507-747950:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:738406-739186:-1:exon

position:747950:-1
position: 747950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747507-747950:-1:exon

position:747507:-1
position: 747507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742827-742960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742265-742382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741825-741895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741618-741693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741239-741301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741075-741144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:738406-739186:-1:exon

tpm4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tpm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin 4a isoform X2
translation: MEAIKKKMQMLKLDKENAIDRAEQAETEQKAAEERCKQLDDELVSLQKKLKQTEDELDKYSEALKDAQEKLELSEKKAADAEGDVAALNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSECKVSDLEEELKNVTNNLKSLEAQAEKYSEKEDKYEEEIKVLSDKLKEAETRAEFAERTVAKLEKSIDDLEEKLASAKEENLGMHQVLDQTLQELNNI
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(739104..739186,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,749963..750088,751014..751127))
location: region:739104-751127:-1
so has part: feature:751014-751127:-1:exon
so has part: feature:749963-750088:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:739104-739186:-1:exon

XP_026861257.1
type: Protein
SIO_000068: ncbiprotein

position:739104:-1
position: 739104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751127:-1
position: 751127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751014-751127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749963-750088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742827-742960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742265-742382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741825-741895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741618-741693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741239-741301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741075-741144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739104-739186:-1:exon

tpm4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tpm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin 4a isoform X4
translation: MAGVTSLDAVKRKIQSLQQQADDAEDRALVLQRELDNERELREKAEGDVAALNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSECKVSDLEEELKNVTNNLKSLEAQAEKYSEKEDKYEEEIKVLSDKLKEAETRAEFAERTVAKLEKSIDDLEEKLASAKEENLGMHQVLDQTLQELNNI
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(739104..739186,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,747507..747638))
location: region:739104-747638:-1
so has part: feature:747507-747638:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:739104-739186:-1:exon

XP_026861259.1
type: Protein
SIO_000068: ncbiprotein

position:747638:-1
position: 747638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747507-747638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742827-742960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742265-742382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741825-741895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741618-741693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741239-741301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741075-741144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739104-739186:-1:exon

tpm4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tpm4a
product: tropomyosin 4a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027005455.2
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(740028..740239,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,749963..750088,751014..751370))
location: region:740028-751370:-1
so has part: feature:751014-751370:-1:exon
so has part: feature:749963-750088:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:740028-740239:-1:exon

position:740028:-1
position: 740028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751370:-1
position: 751370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751014-751370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749963-750088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742827-742960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742265-742382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741825-741895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741618-741693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741239-741301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741075-741144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:740028-740239:-1:exon

position:740239:-1
position: 740239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tpm4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tpm4a
product: tropomyosin 4a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027005457.2
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(740028..740239,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,747507..747942))
location: region:740028-747942:-1
so has part: feature:747507-747942:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:740028-740239:-1:exon

position:747942:-1
position: 747942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747507-747942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742827-742960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742265-742382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741825-741895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741618-741693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741239-741301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741075-741144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740028-740239:-1:exon

tpm4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tpm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin 4a isoform X1
translation: MEAIKKKMQMLKLDKENAIDRAEQAETEQKAAEERCKQLDDELVSLQKKLKQTEDELDKYSEALKDAQEKLELSEKKAADAEGDVAALNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSECKVSDLEEELKNVTNNLKSLEAQAEKYSEKEDKYEEEIKVLSDKLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSL
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(740157..740239,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,749963..750088,751014..751127))
location: region:740157-751127:-1
so has part: feature:751014-751127:-1:exon
so has part: feature:749963-750088:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:740157-740239:-1:exon

XP_026861256.1
type: Protein
SIO_000068: ncbiprotein

position:740157:-1
position: 740157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751014-751127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749963-750088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742827-742960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742265-742382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741825-741895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741618-741693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741239-741301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741075-741144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:740157-740239:-1:exon

tpm4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tpm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin 4a isoform X3
translation: MAGVTSLDAVKRKIQSLQQQADDAEDRALVLQRELDNERELREKAEGDVAALNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSECKVSDLEEELKNVTNNLKSLEAQAEKYSEKEDKYEEEIKVLSDKLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSL
SIO_010081: tpm4a
subclass of: SO_0000673
so part of: tpm4a
location: complement(join(740157..740239,741075..741144,741239..741301,741618..741693,741825..741895,742265..742382,742827..742960,747507..747638))
location: region:740157-747638:-1
so has part: feature:747507-747638:-1:exon
so has part: feature:742827-742960:-1:exon
so has part: feature:742265-742382:-1:exon
so has part: feature:741825-741895:-1:exon
so has part: feature:741618-741693:-1:exon
so has part: feature:741239-741301:-1:exon
so has part: feature:741075-741144:-1:exon
so has part: feature:740157-740239:-1:exon

XP_026861258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:747507-747638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742827-742960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742265-742382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741825-741895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741618-741693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741239-741301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741075-741144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740157-740239:-1:exon

lpl
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: lpl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 762663..769338
location: region:762663-769338:1
so has part: feature:762663-769338:1:exon
subclass of: SO_0000010

113574503
type: Gene
SIO_000068: ncbigene

position:762663:1
position: 762663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769338:1
position: 769338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762663-769338:1:exon

lpl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: lpl
product: lipoprotein lipase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027005472.2
SIO_010081: lpl
subclass of: SO_0000673
so part of: lpl
location: join(762663..762917,763872..764059,764245..764424,764668..764779,765020..765253,765468..765710,766392..766512,766652..766831,766941..767048,767189..769338)
location: region:762663-769338:1
so has part: feature:762663-762917:1:exon
so has part: feature:763872-764059:1:exon
so has part: feature:764245-764424:1:exon
so has part: feature:764668-764779:1:exon
so has part: feature:765020-765253:1:exon
so has part: feature:765468-765710:1:exon
so has part: feature:766392-766512:1:exon
so has part: feature:766652-766831:1:exon
so has part: feature:766941-767048:1:exon
so has part: feature:767189-769338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762663-762917:1:exon

position:762917:1
position: 762917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763872-764059:1:exon

position:763872:1
position: 763872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764059:1
position: 764059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:764245-764424:1:exon

position:764245:1
position: 764245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764424:1
position: 764424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:764668-764779:1:exon