Electrophorus electricus isolate fEleEle1 chromosome 22, fEleEle1.pri, whole genome shotgun sequence.
type: Entry
definition: Electrophorus electricus isolate fEleEle1 chromosome 22, fEleEle1.pri, whole genome shotgun sequence.
sequence version: NC_049556.1
sequence date: 2020-07-16
sequence: sequence
division: CON
label: NC_049556.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA645070
dblink: SAMN12623625
keyword: WGS
keyword: RefSeq
source: Electrophorus electricus (electric eel)
organism: Electrophorus electricus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM023701.1.\nAssembly name: fEleEle1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/06/23. The original whole-genome shotgun project has the\naccession JABVME000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 17-MAR-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 7.0.1.66975; purge_dups v. v1;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.4; Salsa HiC v. 2.2; Arrow smrtanalysis\n Pacbio polishing & gap filling v.\n SMRTLink7.0.1; longranger align v. 2.2.2;\n freebayes Illumina polishing v. 1.3.1;\n gEVAL manual curation v. 2020-03-17; VGP\n assembly pipeline individual v. 1.6\nAssembly Name :: fEleEle1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 52.97x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Electrophorus electricus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 14621190
topology: linear
so has quality: SO_0000987
location: 1..14621190
location: region:1-14621190:1
RO_0002162: 8005

NC_049556
type: RefSeq
SIO_000068: refseq

PRJNA645070
type: BioProject
SIO_000068: bioproject

SAMN12623625
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14621190:1
position: 14621190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14621190:1:source
so part of: sequence
organism: Electrophorus electricus
mol type: genomic DNA
isolate: fEleEle1
chromosome: 22
tissue type: liver
dev stage: juvenile
country: Netherlands: Dejong Marinelife, Rotterdam
lat lon: 51.9244201 N 4.4777325 E
collection date: 29-Nov-2018
collected by: Nidal Karagic

8005
type: Taxonomy
SIO_000068: taxonomy

LOC113568239
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36328..39349)
location: region:36328-39349:-1
so has part: feature:36328-39349:-1:exon
subclass of: SO_0000011

113568239
type: Gene
SIO_000068: ncbigene

position:36328:-1
position: 36328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39349:-1
position: 39349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36328-39349:-1:exon

LOC113568239
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC113568239
product: uncharacterized LOC113568239
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003409563.2
SIO_010081: LOC113568239
subclass of: SO_0000673
so part of: LOC113568239
location: complement(join(36328..36400,37109..37147,37437..37528,39014..39349))
location: region:36328-39349:-1
so has part: feature:39014-39349:-1:exon
so has part: feature:37437-37528:-1:exon
so has part: feature:37109-37147:-1:exon
so has part: feature:36328-36400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39014-39349:-1:exon

position:39014:-1
position: 39014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37437-37528:-1:exon

position:37437:-1
position: 37437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37528:-1
position: 37528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37109-37147:-1:exon

position:37109:-1
position: 37109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37147:-1
position: 37147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36328-36400:-1:exon

position:36400:-1
position: 36400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113568234
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 67213..71980
location: region:67213-71980:1
so has part: feature:67213-71980:1:exon
subclass of: SO_0000011

113568234
type: Gene
SIO_000068: ncbigene

position:67213:1
position: 67213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71980:1
position: 71980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67213-71980:1:exon

LOC113568234
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC113568234
product: uncharacterized LOC113568234
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003409562.2
SIO_010081: LOC113568234
subclass of: SO_0000673
so part of: LOC113568234
location: join(67213..67302,67744..67793,71402..71621,71705..71980)
location: region:67213-71980:1
so has part: feature:67213-67302:1:exon
so has part: feature:67744-67793:1:exon
so has part: feature:71402-71621:1:exon
so has part: feature:71705-71980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67213-67302:1:exon

position:67302:1
position: 67302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67744-67793:1:exon

position:67744:1
position: 67744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67793:1
position: 67793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71402-71621:1:exon

position:71402:1
position: 71402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71621:1
position: 71621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71705-71980:1:exon

position:71705:1
position: 71705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

txnl1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: txnl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121154..130170)
location: region:121154-130170:-1
so has part: feature:121154-130170:-1:exon
subclass of: SO_0000010

113568503
type: Gene
SIO_000068: ncbigene

position:121154:-1
position: 121154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130170:-1
position: 130170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121154-130170:-1:exon

txnl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: txnl1
product: thioredoxin-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_035521164.1
SIO_010081: txnl1
subclass of: SO_0000673
so part of: txnl1
location: complement(join(121154..121359,122263..122367,124827..124999,125653..125722,126427..126549,127512..127685,127939..128035,129952..130170))
location: region:121154-130170:-1
so has part: feature:129952-130170:-1:exon
so has part: feature:127939-128035:-1:exon
so has part: feature:127512-127685:-1:exon
so has part: feature:126427-126549:-1:exon
so has part: feature:125653-125722:-1:exon
so has part: feature:124827-124999:-1:exon
so has part: feature:122263-122367:-1:exon
so has part: feature:121154-121359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129952-130170:-1:exon

position:129952:-1
position: 129952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127939-128035:-1:exon

position:127939:-1
position: 127939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128035:-1
position: 128035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127512-127685:-1:exon

position:127512:-1
position: 127512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127685:-1
position: 127685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126427-126549:-1:exon

position:126427:-1
position: 126427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126549:-1
position: 126549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125653-125722:-1:exon

position:125653:-1
position: 125653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125722:-1
position: 125722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:124827-124999:-1:exon

position:124827:-1
position: 124827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124999:-1
position: 124999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122263-122367:-1:exon

position:122263:-1
position: 122263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122367:-1
position: 122367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:121154-121359:-1:exon

position:121359:-1
position: 121359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

txnl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: txnl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 1
translation: MVGVKVIASDSEFQPELSSAGSRLAVVKFTMAGCRPCVRIAPAFSALSSRYPQVVFLEVDVHVCQGTAAANNISATPTFLFFRNKVRVDQYQGADAAGLEDKIKQHVENDPGSGEDSDIPKGYMDLMPFVNKAGCECLNESDDCGFDNCLSKDSSYLESDCDEQLLITVSFSQPVKLFSMKLQAADLPQAPRCVKIFINLPRSMDFDDAEHSEATQMLELSEEDYKDDGLVSLRYVKFQNVNSVTLFIKSNLGDEETTKVNHLTFIGTPVQATNMNDFKRVVGKKGESH
SIO_010081: txnl1
subclass of: SO_0000673
so part of: txnl1
location: complement(join(121330..121359,122263..122367,124827..124999,125653..125722,126427..126549,127512..127685,127939..128035,129952..130049))
location: region:121330-130049:-1
so has part: feature:129952-130049:-1:exon
so has part: feature:127939-128035:-1:exon
so has part: feature:127512-127685:-1:exon
so has part: feature:126427-126549:-1:exon
so has part: feature:125653-125722:-1:exon
so has part: feature:124827-124999:-1:exon
so has part: feature:122263-122367:-1:exon
so has part: feature:121330-121359:-1:exon

XP_035377057.1
type: Protein
SIO_000068: ncbiprotein

position:121330:-1
position: 121330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130049:-1
position: 130049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129952-130049:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127939-128035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127512-127685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126427-126549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125653-125722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:124827-124999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122263-122367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121330-121359:-1:exon

LOC113569642
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 132814..136825
location: region:132814-136825:1
so has part: feature:132814-136825:1:exon

113569642
type: Gene
SIO_000068: ncbigene

position:132814:1
position: 132814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136825:1
position: 136825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132814-136825:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 132814..132884
location: region:132814-132884:1
so has part: feature:132814-132884:1:exon

position:132884:1
position: 132884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132814-132884:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 133006..133039
location: region:133006-133039:1
so has part: feature:133006-133039:1:exon

position:133006:1
position: 133006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133039:1
position: 133039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133006-133039:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 133191..133283
location: region:133191-133283:1
so has part: feature:133191-133283:1:exon

position:133191:1
position: 133191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133283:1
position: 133283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133191-133283:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 133373..133462
location: region:133373-133462:1
so has part: feature:133373-133462:1:exon

position:133373:1
position: 133373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133462:1
position: 133462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133373-133462:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 133909..133987
location: region:133909-133987:1
so has part: feature:133909-133987:1:exon

position:133909:1
position: 133909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133987:1
position: 133987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133909-133987:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 134251..134321
location: region:134251-134321:1
so has part: feature:134251-134321:1:exon

position:134251:1
position: 134251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134321:1
position: 134321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134251-134321:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 134490..134580
location: region:134490-134580:1
so has part: feature:134490-134580:1:exon

position:134490:1
position: 134490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134580:1
position: 134580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134490-134580:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 135272..135501
location: region:135272-135501:1
so has part: feature:135272-135501:1:exon

position:135272:1
position: 135272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135501:1
position: 135501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135272-135501:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 135660..135773
location: region:135660-135773:1
so has part: feature:135660-135773:1:exon

position:135660:1
position: 135660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135773:1
position: 135773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135660-135773:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 136060..136267
location: region:136060-136267:1
so has part: feature:136060-136267:1:exon

position:136060:1
position: 136060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136267:1
position: 136267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136060-136267:1:exon

LOC113569642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569642
subclass of: SO_0000673
so part of: LOC113569642
location: 136694..136825
location: region:136694-136825:1
so has part: feature:136694-136825:1:exon

position:136694:1
position: 136694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136694-136825:1:exon

LOC118240634
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(138159..142576)
location: region:138159-142576:-1
so has part: feature:138159-142576:-1:exon
subclass of: SO_0000010

118240634
type: Gene
SIO_000068: ncbigene

position:138159:-1
position: 138159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142576:-1
position: 142576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138159-142576:-1:exon

LOC118240634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240634
product: high affinity immunoglobulin epsilon receptor subunit alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521705.1
SIO_010081: LOC118240634
subclass of: SO_0000673
so part of: LOC118240634
location: complement(join(138159..138363,139078..139194,141556..141804,142203..142418,142558..142576))
location: region:138159-142576:-1
so has part: feature:142558-142576:-1:exon
so has part: feature:142203-142418:-1:exon
so has part: feature:141556-141804:-1:exon
so has part: feature:139078-139194:-1:exon
so has part: feature:138159-138363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142558-142576:-1:exon

position:142558:-1
position: 142558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142203-142418:-1:exon

position:142203:-1
position: 142203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142418:-1
position: 142418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141556-141804:-1:exon

position:141556:-1
position: 141556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141804:-1
position: 141804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139078-139194:-1:exon

position:139078:-1
position: 139078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139194:-1
position: 139194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:138159-138363:-1:exon

position:138363:-1
position: 138363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity immunoglobulin epsilon receptor subunit alpha-like
translation: MVVIFPSLSLSCKGQSDSTGWRVRGYTHSGNVSDCLSPWGSVTGSTCTIRYLYTSHTGVYWCQSESGGSSNPVNITVHNGGVILESSVHPVTEGDPLTLHCFLHPTITSHLRADLYKDGSLIQTQTAGEITIRTVSKSDEGVYYCKHPERGESPHSWVSVRALSHSEAPFSILSLLSSLLAVSPYLLVSIVLGVKCYRAHALTKNAVSEE
SIO_010081: LOC118240634
subclass of: SO_0000673
so part of: LOC118240634
location: complement(join(138332..138363,139078..139194,141556..141804,142203..142418,142558..142576))
location: region:138332-142576:-1
so has part: feature:142558-142576:-1:exon
so has part: feature:142203-142418:-1:exon
so has part: feature:141556-141804:-1:exon
so has part: feature:139078-139194:-1:exon
so has part: feature:138332-138363:-1:exon

XP_035377598.1
type: Protein
SIO_000068: ncbiprotein

position:138332:-1
position: 138332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142558-142576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142203-142418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141556-141804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139078-139194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:138332-138363:-1:exon

LOC118240602
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(195967..199722)
location: region:195967-199722:-1
so has part: feature:195967-199722:-1:exon
subclass of: SO_0000011

118240602
type: Gene
SIO_000068: ncbigene

position:195967:-1
position: 195967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199722:-1
position: 199722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195967-199722:-1:exon

LOC118240602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240602
product: uncharacterized LOC118240602
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004775515.1
SIO_010081: LOC118240602
subclass of: SO_0000673
so part of: LOC118240602
location: complement(join(195967..197245,197959..198075,199690..199722))
location: region:195967-199722:-1
so has part: feature:199690-199722:-1:exon
so has part: feature:197959-198075:-1:exon
so has part: feature:195967-197245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199690-199722:-1:exon

position:199690:-1
position: 199690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197959-198075:-1:exon

position:197959:-1
position: 197959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198075:-1
position: 198075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195967-197245:-1:exon

position:197245:-1
position: 197245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240635
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 208951..>222843
location: region:208951-222843:1
so has part: feature:208951-222843:1:exon
subclass of: SO_0000010

118240635
type: Gene
SIO_000068: ncbigene

position:208951:1
position: 208951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222843:1
position: 222843
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208951-222843:1:exon

LOC118240635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240635
product: uncharacterized LOC118240635
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521706.1
SIO_010081: LOC118240635
subclass of: SO_0000673
so part of: LOC118240635
location: join(208951..208962,209471..209536,209627..209707,221750..221764,222153..222345,222449..>222843)
location: region:208951-222843:1
so has part: feature:208951-208962:1:exon
so has part: feature:209471-209536:1:exon
so has part: feature:209627-209707:1:exon
so has part: feature:221750-221764:1:exon
so has part: feature:222153-222345:1:exon
so has part: feature:222449-222843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208951-208962:1:exon

position:208962:1
position: 208962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209471-209536:1:exon

position:209471:1
position: 209471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209536:1
position: 209536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209627-209707:1:exon

position:209627:1
position: 209627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209707:1
position: 209707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:221750-221764:1:exon

position:221750:1
position: 221750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221764:1
position: 221764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222153-222345:1:exon

position:222153:1
position: 222153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222345:1
position: 222345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222449-222843:1:exon

position:222449:1
position: 222449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118240635
translation: MASLIHYCCVTVPVTNGHPPPVPDVTLFPRICFVSDCLAYLSPVVWSSACWSRLDLLKGEGDTGWTYSWYKDGNTIYPYITSNTYTFNFVVQYDSGTYTCRGYRGRDSQSSEISNAVTLTVSERPQALLSVSPQSWLTEGVSVSLSCEVRDSSTGWTFSWYRAVPYRECLSPVTDIHGYVRYCVELLSESSRRAGGSYTLSPAALHHTGVYVCRAERGEPAYQTQYSNTQPLWITGEDIQQLCMCVCVCVCVCV
SIO_010081: LOC118240635
subclass of: SO_0000673
so part of: LOC118240635
location: join(208951..208962,209471..209536,209627..209707,221750..221764,222153..222345,222449..>222843)
location: region:208951-222843:1
so has part: feature:208951-208962:1:exon
so has part: feature:209471-209536:1:exon
so has part: feature:209627-209707:1:exon
so has part: feature:221750-221764:1:exon
so has part: feature:222153-222345:1:exon
so has part: feature:222449-222843:1:exon

XP_035377599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208951-208962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209471-209536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209627-209707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221750-221764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222153-222345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222449-222843:1:exon

LOC118240595
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <223118..229108
location: region:223118-229108:1
so has part: feature:223118-229108:1:exon
subclass of: SO_0000010

118240595
type: Gene
SIO_000068: ncbigene

position:223118:1
position: 223118
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:229108:1
position: 229108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223118-229108:1:exon

LOC118240595
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240595
product: basement membrane-specific heparan sulfate proteoglycan core protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035521507.1
SIO_010081: LOC118240595
subclass of: SO_0000673
so part of: LOC118240595
location: join(<223118..223334,223667..223915,225566..225844,226768..226872,226996..227070,228025..228102,228317..228376,228907..229108)
location: region:223118-229108:1
so has part: feature:223118-223334:1:exon
so has part: feature:223667-223915:1:exon
so has part: feature:225566-225844:1:exon
so has part: feature:226768-226872:1:exon
so has part: feature:226996-227070:1:exon
so has part: feature:228025-228102:1:exon
so has part: feature:228317-228376:1:exon
so has part: feature:228907-229108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223118-223334:1:exon

position:223334:1
position: 223334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223667-223915:1:exon

position:223667:1
position: 223667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223915:1
position: 223915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225566-225844:1:exon

position:225566:1
position: 225566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225844:1
position: 225844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226768-226872:1:exon

position:226768:1
position: 226768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226872:1
position: 226872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:226996-227070:1:exon

position:226996:1
position: 226996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227070:1
position: 227070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:228025-228102:1:exon

position:228025:1
position: 228025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228102:1
position: 228102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:228317-228376:1:exon

position:228317:1
position: 228317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228376:1
position: 228376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:228907-229108:1:exon

position:228907:1
position: 228907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basement membrane-specific heparan sulfate proteoglycan core protein-like
translation: SLSLSCEGQSDSTGWRVRRYTHSGSVSDCSSDWGSVTGSTCTIGYLYTTHTGVYWCQSESGGSSNPVNITVHNGDVILESSVHPVTEGDPLTLHCLLHLNITSHLRADLYKDGSLIQTQTAGEITIHTVSKSDEGVYYCKHPERGESPHSWVSVRAVKPTPKLTSSLKGAALVGNPVTLHCKLDQPAGWSFYWSRRTQNPENETNTAANSYNISSVAPSDGGQYWCRAGRGNPVYYTNYSDAIWVNVTAGDSSSLGLFGLAVGPSLVVFFILLTLLWSYKNNKESLCRCTGSQSDINQTSDQTQRESGDTGAGPSEVIYAEVELKPKQKAKKKEEKS
SIO_010081: LOC118240595
subclass of: SO_0000673
so part of: LOC118240595
location: join(<223118..223334,223667..223915,225566..225844,226768..226872,226996..227070,228025..228102,228317..228327)
location: region:223118-228327:1
so has part: feature:223118-223334:1:exon
so has part: feature:223667-223915:1:exon
so has part: feature:225566-225844:1:exon
so has part: feature:226768-226872:1:exon
so has part: feature:226996-227070:1:exon
so has part: feature:228025-228102:1:exon
so has part: feature:228317-228327:1:exon

XP_035377400.1
type: Protein
SIO_000068: ncbiprotein

position:228327:1
position: 228327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223118-223334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223667-223915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225566-225844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226768-226872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226996-227070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228025-228102:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228317-228327:1:exon

LOC118240597
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(244884..249664)
location: region:244884-249664:-1
so has part: feature:244884-249664:-1:exon
subclass of: SO_0000011

118240597
type: Gene
SIO_000068: ncbigene

position:244884:-1
position: 244884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249664:-1
position: 249664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244884-249664:-1:exon

LOC118240597
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240597
product: uncharacterized LOC118240597, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004775508.1
SIO_010081: LOC118240597
subclass of: SO_0000673
so part of: LOC118240597
location: complement(join(244884..245233,245936..246052,249447..249664))
location: region:244884-249664:-1
so has part: feature:249447-249664:-1:exon
so has part: feature:245936-246052:-1:exon
so has part: feature:244884-245233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249447-249664:-1:exon

position:249447:-1
position: 249447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245936-246052:-1:exon

position:245936:-1
position: 245936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246052:-1
position: 246052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:244884-245233:-1:exon

position:245233:-1
position: 245233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240597
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240597
product: uncharacterized LOC118240597, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775509.1
SIO_010081: LOC118240597
subclass of: SO_0000673
so part of: LOC118240597
location: complement(join(244884..245233,245936..246052,246802..247121))
location: region:244884-247121:-1
so has part: feature:246802-247121:-1:exon
so has part: feature:245936-246052:-1:exon
so has part: feature:244884-245233:-1:exon

position:247121:-1
position: 247121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246802-247121:-1:exon

position:246802:-1
position: 246802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245936-246052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244884-245233:-1:exon

LOC118240593
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 273536..278111
location: region:273536-278111:1
so has part: feature:273536-278111:1:exon
subclass of: SO_0000010

118240593
type: Gene
SIO_000068: ncbigene

position:273536:1
position: 273536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278111:1
position: 278111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273536-278111:1:exon

LOC118240593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240593
product: uncharacterized LOC118240593
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035521505.1
SIO_010081: LOC118240593
subclass of: SO_0000673
so part of: LOC118240593
location: join(273536..273661,274489..274764,275657..275761,275885..275959,276147..276197,276332..276406,276608..276665,276902..276946,277473..278111)
location: region:273536-278111:1
so has part: feature:273536-273661:1:exon
so has part: feature:274489-274764:1:exon
so has part: feature:275657-275761:1:exon
so has part: feature:275885-275959:1:exon
so has part: feature:276147-276197:1:exon
so has part: feature:276332-276406:1:exon
so has part: feature:276608-276665:1:exon
so has part: feature:276902-276946:1:exon
so has part: feature:277473-278111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273536-273661:1:exon

position:273661:1
position: 273661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274489-274764:1:exon

position:274489:1
position: 274489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274764:1
position: 274764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275657-275761:1:exon

position:275657:1
position: 275657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275761:1
position: 275761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275885-275959:1:exon

position:275885:1
position: 275885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275959:1
position: 275959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:276147-276197:1:exon

position:276147:1
position: 276147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276197:1
position: 276197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276332-276406:1:exon

position:276332:1
position: 276332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276406:1
position: 276406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:276608-276665:1:exon

position:276608:1
position: 276608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276665:1
position: 276665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:276902-276946:1:exon

position:276902:1
position: 276902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276946:1
position: 276946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:277473-278111:1:exon

position:277473:1
position: 277473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118240593
translation: MDQPAGWSFYWSRHTQNPENETNTAANSYNISSVAPSDGGQYWCRAGRGNPVYYTNYSDALWVNVTAGDSSSLGLGGLAVGLSLVVFFILLTLLWCYKTKKESPCRCIGSQSDINQTSDQTQRESGEAAHIYDTAEPADRSSTDEPADDLSDVTYAQVMKYNKKSRNKDTGAGPSEVIYAEIKLKPKQEEQCVLRAEAGHTERLLRNSTDCWETEFILLCYSLKLLQDQEFKPSYPSVHSFIWFKHILNDHVRYSCLQQEGVL
SIO_010081: LOC118240593
subclass of: SO_0000673
so part of: LOC118240593
location: join(274566..274764,275657..275761,275885..275959,276147..276197,276332..276406,276608..276665,276902..276946,277473..277656)
location: region:274566-277656:1
so has part: feature:274566-274764:1:exon
so has part: feature:275657-275761:1:exon
so has part: feature:275885-275959:1:exon
so has part: feature:276147-276197:1:exon
so has part: feature:276332-276406:1:exon
so has part: feature:276608-276665:1:exon
so has part: feature:276902-276946:1:exon
so has part: feature:277473-277656:1:exon

XP_035377398.1
type: Protein
SIO_000068: ncbiprotein

position:274566:1
position: 274566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277656:1
position: 277656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274566-274764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275657-275761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275885-275959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276147-276197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276332-276406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276608-276665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276902-276946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277473-277656:1:exon

LOC118240636
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(282367..290866)
location: region:282367-290866:-1
so has part: feature:282367-290866:-1:exon
subclass of: SO_0000010

118240636
type: Gene
SIO_000068: ncbigene

position:282367:-1
position: 282367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290866:-1
position: 290866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282367-290866:-1:exon

LOC118240636
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240636
product: Fc receptor-like protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521707.1
SIO_010081: LOC118240636
subclass of: SO_0000673
so part of: LOC118240636
location: complement(join(282367..282372,285450..285628,286820..287119,290238..290449,290856..290866))
location: region:282367-290866:-1
so has part: feature:290856-290866:-1:exon
so has part: feature:290238-290449:-1:exon
so has part: feature:286820-287119:-1:exon
so has part: feature:285450-285628:-1:exon
so has part: feature:282367-282372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290856-290866:-1:exon

position:290856:-1
position: 290856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290238-290449:-1:exon

position:290238:-1
position: 290238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290449:-1
position: 290449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286820-287119:-1:exon

position:286820:-1
position: 286820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287119:-1
position: 287119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:285450-285628:-1:exon

position:285450:-1
position: 285450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285628:-1
position: 285628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:282367-282372:-1:exon

position:282372:-1
position: 282372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240636
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fc receptor-like protein 5
translation: MVSVSLSCEGQSDSTGWRVRGYTHSGSVSDCSSLWGSVTGSTCTIRYLYTYHTGVYWCQSESGGSSNPVNITVHNLPTNTLTVEPQSPVFTGESVTLKCEVQGYDGWTYQWGYKKKAQSQWTTVSQSVFDTVNRDTLTISRDAVVNGDQYQCRGARNNRPTTSQYSNIVTLTVHVKPTPELTSSLTGAALVGNPVTLHCKLDQSAGWSFYWSRHTQNPENETNTAANSYNISSVL
SIO_010081: LOC118240636
subclass of: SO_0000673
so part of: LOC118240636
location: complement(join(282367..282372,285450..285628,286820..287119,290238..290449,290856..290866))
location: region:282367-290866:-1
so has part: feature:290856-290866:-1:exon
so has part: feature:290238-290449:-1:exon
so has part: feature:286820-287119:-1:exon
so has part: feature:285450-285628:-1:exon
so has part: feature:282367-282372:-1:exon

XP_035377600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290856-290866:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290238-290449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286820-287119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285450-285628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282367-282372:-1:exon

LOC118240598
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291092..292640
location: region:291092-292640:1
so has part: feature:291092-292640:1:exon
subclass of: SO_0000011

118240598
type: Gene
SIO_000068: ncbigene

position:291092:1
position: 291092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292640:1
position: 292640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291092-292640:1:exon

LOC118240598
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240598
product: uncharacterized LOC118240598
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775510.1
SIO_010081: LOC118240598
subclass of: SO_0000673
so part of: LOC118240598
location: join(291092..291230,291467..292640)
location: region:291092-292640:1
so has part: feature:291092-291230:1:exon
so has part: feature:291467-292640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291092-291230:1:exon

position:291230:1
position: 291230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291467-292640:1:exon

position:291467:1
position: 291467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240599
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(294403..297631)
location: region:294403-297631:-1
so has part: feature:294403-297631:-1:exon
subclass of: SO_0000011

118240599
type: Gene
SIO_000068: ncbigene

position:294403:-1
position: 294403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297631:-1
position: 297631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294403-297631:-1:exon

LOC118240599
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240599
product: uncharacterized LOC118240599
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775511.1
SIO_010081: LOC118240599
subclass of: SO_0000673
so part of: LOC118240599
location: complement(join(294403..295220,297466..297631))
location: region:294403-297631:-1
so has part: feature:297466-297631:-1:exon
so has part: feature:294403-295220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297466-297631:-1:exon

position:297466:-1
position: 297466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294403-295220:-1:exon

position:295220:-1
position: 295220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240637
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <312880..363519
location: region:312880-363519:1
so has part: feature:312880-363519:1:exon
subclass of: SO_0000010

118240637
type: Gene
SIO_000068: ncbigene

position:312880:1
position: 312880
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:363519:1
position: 363519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312880-363519:1:exon

LOC118240637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240637
product: Fc receptor-like protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521708.1
SIO_010081: LOC118240637
subclass of: SO_0000673
so part of: LOC118240637
location: join(<312880..312898,313720..313995,359162..359437,359541..359879,362377..362648,363511..363519)
location: region:312880-363519:1
so has part: feature:312880-312898:1:exon
so has part: feature:313720-313995:1:exon
so has part: feature:359162-359437:1:exon
so has part: feature:359541-359879:1:exon
so has part: feature:362377-362648:1:exon
so has part: feature:363511-363519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312880-312898:1:exon

position:312898:1
position: 312898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313720-313995:1:exon

position:313720:1
position: 313720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313995:1
position: 313995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359162-359437:1:exon

position:359162:1
position: 359162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359437:1
position: 359437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:359541-359879:1:exon

position:359541:1
position: 359541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359879:1
position: 359879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362377-362648:1:exon

position:362377:1
position: 362377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362648:1
position: 362648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:363511-363519:1:exon

position:363511:1
position: 363511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fc receptor-like protein 5
translation: VTLTVHVKPTPELTSSLTGAALVGNPVTLHCKLDQSTGWSFYWSRHTQNPENETNTAANSYNISSVAPSDGGQYWCRAGRGNPVYYTNYSDVLWLNLTGHVKAVVSVSPDNHVFRGETVTLRCDIQGEGDTGWTYSWYKNNYSIYPNVTYNPYMISSVTQYDSGTYTCRGYRERDSQSSEISNAVTLTVSERAQAVLNVSPQSWLTEGDSVSLSCEVRDSSTGWTFSWYRSVPYRECLTPVTHNHSYVRYCVELLSDSIRGSGGSYTLSPAAQHHTGVYVCRAERGEPAYQTQYSNTQPLWITGLSPPVSLIISPSRTQHFRGDSLSLSCEGQSDSTGWRVRRYTHSRRVSDCSSLWGSVTGSTCTIRYLYTIHSGVYWCQSESGGSSNPVNITQK
SIO_010081: LOC118240637
subclass of: SO_0000673
so part of: LOC118240637
location: join(<312880..312898,313720..313995,359162..359437,359541..359879,362377..362648,363511..363519)
location: region:312880-363519:1
so has part: feature:312880-312898:1:exon
so has part: feature:313720-313995:1:exon
so has part: feature:359162-359437:1:exon
so has part: feature:359541-359879:1:exon
so has part: feature:362377-362648:1:exon
so has part: feature:363511-363519:1:exon

XP_035377601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312880-312898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313720-313995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359162-359437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359541-359879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362377-362648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363511-363519:1:exon

LOC118240606
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343254..344314)
location: region:343254-344314:-1
so has part: feature:343254-344314:-1:exon
subclass of: SO_0000011

118240606
type: Gene
SIO_000068: ncbigene

position:343254:-1
position: 343254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344314:-1
position: 344314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343254-344314:-1:exon

LOC118240606
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240606
product: uncharacterized LOC118240606
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004775519.1
SIO_010081: LOC118240606
subclass of: SO_0000673
so part of: LOC118240606
location: complement(join(343254..343447,343981..344040,344257..344314))
location: region:343254-344314:-1
so has part: feature:344257-344314:-1:exon
so has part: feature:343981-344040:-1:exon
so has part: feature:343254-343447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344257-344314:-1:exon

position:344257:-1
position: 344257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343981-344040:-1:exon

position:343981:-1
position: 343981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344040:-1
position: 344040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:343254-343447:-1:exon

position:343447:-1
position: 343447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113569266
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113569266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(344669..345427)
location: region:344669-345427:-1
so has part: feature:344669-345427:-1:exon
subclass of: SO_0000011

113569266
type: Gene
SIO_000068: ncbigene

position:344669:-1
position: 344669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345427:-1
position: 345427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344669-345427:-1:exon

LOC113569266
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC113569266
product: uncharacterized LOC113569266
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004775521.1
SIO_010081: LOC113569266
subclass of: SO_0000673
so part of: LOC113569266
location: complement(join(344669..344742,344898..344948,345136..345210,345335..345427))
location: region:344669-345427:-1
so has part: feature:345335-345427:-1:exon
so has part: feature:345136-345210:-1:exon
so has part: feature:344898-344948:-1:exon
so has part: feature:344669-344742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345335-345427:-1:exon

position:345335:-1
position: 345335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345136-345210:-1:exon

position:345136:-1
position: 345136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345210:-1
position: 345210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344898-344948:-1:exon

position:344898:-1
position: 344898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344948:-1
position: 344948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:344669-344742:-1:exon

position:344742:-1
position: 344742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240638
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 364426..368683
location: region:364426-368683:1
so has part: feature:364426-368683:1:exon
subclass of: SO_0000010

118240638
type: Gene
SIO_000068: ncbigene

position:364426:1
position: 364426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368683:1
position: 368683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364426-368683:1:exon

LOC118240638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240638
product: uncharacterized LOC118240638
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521709.1
SIO_010081: LOC118240638
subclass of: SO_0000673
so part of: LOC118240638
location: join(364426..364444,364612..364632,365448..365723,366632..366736,366860..366934,367133..367183,367339..367413,367738..367815,368030..368110,368621..368683)
location: region:364426-368683:1
so has part: feature:364426-364444:1:exon
so has part: feature:364612-364632:1:exon
so has part: feature:365448-365723:1:exon
so has part: feature:366632-366736:1:exon
so has part: feature:366860-366934:1:exon
so has part: feature:367133-367183:1:exon
so has part: feature:367339-367413:1:exon
so has part: feature:367738-367815:1:exon
so has part: feature:368030-368110:1:exon
so has part: feature:368621-368683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364426-364444:1:exon

position:364444:1
position: 364444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364612-364632:1:exon

position:364612:1
position: 364612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364632:1
position: 364632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365448-365723:1:exon

position:365448:1
position: 365448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365723:1
position: 365723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366632-366736:1:exon

position:366632:1
position: 366632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366736:1
position: 366736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:366860-366934:1:exon

position:366860:1
position: 366860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366934:1
position: 366934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:367133-367183:1:exon

position:367133:1
position: 367133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367183:1
position: 367183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:367339-367413:1:exon

position:367339:1
position: 367339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367413:1
position: 367413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:367738-367815:1:exon

position:367738:1
position: 367738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367815:1
position: 367815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:368030-368110:1:exon

position:368030:1
position: 368030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368110:1
position: 368110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368621-368683:1:exon

position:368621:1
position: 368621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118240638
translation: MGGHISVVTLTVHVKPTPELTSSLTGAALVGNPVTLHCKLDQSAGWSFYWSRHTQNPENETNTAANSYNISSVAPSDGGQYWCRAGRGNPVYYTNYSDAIWLNVTAGDSSSLGLVGLAVGLSLVVFSILLTLLWCYKTNKESLCRCTGSQSDINQTSDQTQRESGEAAHIYDTAERADRSSTDEPADDLSDVTYAQVMKHNKKSRNKDTGAGPSEVTYAEIELKPKQKAKKKEEKSSVGADTVYSELRQDSHKGQSSKIYGC
SIO_010081: LOC118240638
subclass of: SO_0000673
so part of: LOC118240638
location: join(364426..364444,364612..364632,365448..365723,366632..366736,366860..366934,367133..367183,367339..367413,367738..367815,368030..368110,368621..368628)
location: region:364426-368628:1
so has part: feature:364426-364444:1:exon
so has part: feature:364612-364632:1:exon
so has part: feature:365448-365723:1:exon
so has part: feature:366632-366736:1:exon
so has part: feature:366860-366934:1:exon
so has part: feature:367133-367183:1:exon
so has part: feature:367339-367413:1:exon
so has part: feature:367738-367815:1:exon
so has part: feature:368030-368110:1:exon
so has part: feature:368621-368628:1:exon

XP_035377602.1
type: Protein
SIO_000068: ncbiprotein

position:368628:1
position: 368628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364426-364444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364612-364632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365448-365723:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366632-366736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:366860-366934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:367133-367183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:367339-367413:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367738-367815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368030-368110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368621-368628:1:exon

LOC118240607
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(400968..404829)
location: region:400968-404829:-1
so has part: feature:400968-404829:-1:exon
subclass of: SO_0000011

118240607
type: Gene
SIO_000068: ncbigene

position:400968:-1
position: 400968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404829:-1
position: 404829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400968-404829:-1:exon

LOC118240607
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240607
product: uncharacterized LOC118240607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775520.1
SIO_010081: LOC118240607
subclass of: SO_0000673
so part of: LOC118240607
location: complement(join(400968..401362,401678..401713,404807..404829))
location: region:400968-404829:-1
so has part: feature:404807-404829:-1:exon
so has part: feature:401678-401713:-1:exon
so has part: feature:400968-401362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404807-404829:-1:exon

position:404807:-1
position: 404807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:401678-401713:-1:exon

position:401678:-1
position: 401678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401713:-1
position: 401713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:400968-401362:-1:exon

position:401362:-1
position: 401362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240639
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 412296..420453
location: region:412296-420453:1
so has part: feature:412296-420453:1:exon
subclass of: SO_0000010

118240639
type: Gene
SIO_000068: ncbigene

position:412296:1
position: 412296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420453:1
position: 420453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412296-420453:1:exon

LOC118240639
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240639
product: Fc receptor-like protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521710.1
SIO_010081: LOC118240639
subclass of: SO_0000673
so part of: LOC118240639
location: join(412296..412300,412896..413107,414973..415272,416462..416737,418847..418963,420131..420453)
location: region:412296-420453:1
so has part: feature:412296-412300:1:exon
so has part: feature:412896-413107:1:exon
so has part: feature:414973-415272:1:exon
so has part: feature:416462-416737:1:exon
so has part: feature:418847-418963:1:exon
so has part: feature:420131-420453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412296-412300:1:exon

position:412300:1
position: 412300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412896-413107:1:exon

position:412896:1
position: 412896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413107:1
position: 413107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414973-415272:1:exon

position:414973:1
position: 414973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415272:1
position: 415272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:416462-416737:1:exon

position:416462:1
position: 416462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416737:1
position: 416737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418847-418963:1:exon

position:418847:1
position: 418847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418963:1
position: 418963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420131-420453:1:exon

position:420131:1
position: 420131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240639
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fc receptor-like protein 5
translation: MHSLSCEGQSDSTGWRVRGYTHSGSVSDCSSLWGSVTGSTCTIGYLYTYHTGVYWCQSESGGSSNPVNITVHNLPTNTLTVEPQSPVFTGESVTLKCEVQGYDGWTYQWGYKKKAQSQWTTVSQSVFDTVNRDTLTISRDAVVNGDQYQCRGARNNRPTTSQYSNIVTLTVHVKPTPELTSSLKGAALVGNPMTLHCKLDQSAGWSFYWSRHTQNPENETNTAANSYNISSVAPSDGGQYWCRAGRGNPVYYTNYSDALWVNVTALSHSEAPLSILSLLSSLLAVSPYLLVSIVLGVKCYRAHVLTKNRSQNAVSEE
SIO_010081: LOC118240639
subclass of: SO_0000673
so part of: LOC118240639
location: join(412296..412300,412896..413107,414973..415272,416462..416737,418847..418963,420131..420174)
location: region:412296-420174:1
so has part: feature:412296-412300:1:exon
so has part: feature:412896-413107:1:exon
so has part: feature:414973-415272:1:exon
so has part: feature:416462-416737:1:exon
so has part: feature:418847-418963:1:exon
so has part: feature:420131-420174:1:exon

XP_035377603.1
type: Protein
SIO_000068: ncbiprotein

position:420174:1
position: 420174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412296-412300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412896-413107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414973-415272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416462-416737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418847-418963:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420131-420174:1:exon

LOC118240640
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(421618..>426273)
location: region:421618-426273:-1
so has part: feature:421618-426273:-1:exon
subclass of: SO_0000010

118240640
type: Gene
SIO_000068: ncbigene

position:421618:-1
position: 421618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426273:-1
position: 426273
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421618-426273:-1:exon

LOC118240640
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240640
product: asparagine--tRNA ligase, cytoplasmic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521711.1
SIO_010081: LOC118240640
subclass of: SO_0000673
so part of: LOC118240640
location: complement(join(421618..421749,423136..423267,423658..423789,424025..424138,424295..424522,424841..425062,425458..425575,425648..425760,425930..425995,426190..>426273))
location: region:421618-426273:-1
so has part: feature:426190-426273:-1:exon
so has part: feature:425930-425995:-1:exon
so has part: feature:425648-425760:-1:exon
so has part: feature:425458-425575:-1:exon
so has part: feature:424841-425062:-1:exon
so has part: feature:424295-424522:-1:exon
so has part: feature:424025-424138:-1:exon
so has part: feature:423658-423789:-1:exon
so has part: feature:423136-423267:-1:exon
so has part: feature:421618-421749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426190-426273:-1:exon

position:426190:-1
position: 426190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425930-425995:-1:exon

position:425930:-1
position: 425930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425995:-1
position: 425995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425648-425760:-1:exon

position:425648:-1
position: 425648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425760:-1
position: 425760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425458-425575:-1:exon

position:425458:-1
position: 425458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425575:-1
position: 425575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424841-425062:-1:exon

position:424841:-1
position: 424841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425062:-1
position: 425062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:424295-424522:-1:exon

position:424295:-1
position: 424295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424522:-1
position: 424522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:424025-424138:-1:exon

position:424025:-1
position: 424025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424138:-1
position: 424138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:423658-423789:-1:exon

position:423658:-1
position: 423658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423789:-1
position: 423789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:423136-423267:-1:exon

position:423136:-1
position: 423136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423267:-1
position: 423267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:421618-421749:-1:exon

position:421749:-1
position: 421749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asparagine--tRNA ligase, cytoplasmic-like
translation: REVYVSDKHGSDESGDGTEHKPFKTPLKALLFAGKEPWPTIYVDAQKDGERWAVISKTQMKNTKKLFHREQQKTDAKDMKEVSAKENPCREEKNLEDAKKIVIENNPSLPDPQTVSQSSPLLLTASCAPGGHELHCDFWELIGLAPAGGADNLVNEESDVDVQLNNRHMMIHGENVSKILRVRSTLTQCFRDRFFSRGYYEITPPTLVQTQVEGGSTLFSLNYFGEQAYLTQSSQLYLETCIPAHGLCSFSFEDLVCAVVDRVLKSPITPLLYDLNPNFKPPTRPFKRMNYTEAIDWLKGHDIQEDDGTHYEFGEDIPEAPERLMMDTINETILLCRFAAEIKSFYMQRCPDDHRLTESVDVLMPNVGEIVGGSMHIWDAEELLEGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWLLNCNHIRDMCLYPRFIQRCRP
SIO_010081: LOC118240640
subclass of: SO_0000673
so part of: LOC118240640
location: complement(join(421618..421749,423136..423267,423658..423789,424025..424138,424295..424522,424841..425062,425458..425575,425648..425760,425930..425995,426190..>426273))
location: region:421618-426273:-1
so has part: feature:426190-426273:-1:exon
so has part: feature:425930-425995:-1:exon
so has part: feature:425648-425760:-1:exon
so has part: feature:425458-425575:-1:exon
so has part: feature:424841-425062:-1:exon
so has part: feature:424295-424522:-1:exon
so has part: feature:424025-424138:-1:exon
so has part: feature:423658-423789:-1:exon
so has part: feature:423136-423267:-1:exon
so has part: feature:421618-421749:-1:exon

XP_035377604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426190-426273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425930-425995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425648-425760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425458-425575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424841-425062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424295-424522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424025-424138:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:423658-423789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:423136-423267:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421618-421749:-1:exon

LOC118240641
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 436903..453291
location: region:436903-453291:1
so has part: feature:436903-453291:1:exon
subclass of: SO_0000010

118240641
type: Gene
SIO_000068: ncbigene

position:436903:1
position: 436903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453291:1
position: 453291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436903-453291:1:exon

LOC118240641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240641
product: uncharacterized LOC118240641
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521712.1
SIO_010081: LOC118240641
subclass of: SO_0000673
so part of: LOC118240641
location: join(436903..437202,445277..445541,451368..451643,452538..452641,452766..452840,453028..453078,453234..453291)
location: region:436903-453291:1
so has part: feature:436903-437202:1:exon
so has part: feature:445277-445541:1:exon
so has part: feature:451368-451643:1:exon
so has part: feature:452538-452641:1:exon
so has part: feature:452766-452840:1:exon
so has part: feature:453028-453078:1:exon
so has part: feature:453234-453291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436903-437202:1:exon

position:437202:1
position: 437202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445277-445541:1:exon

position:445277:1
position: 445277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445541:1
position: 445541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451368-451643:1:exon

position:451368:1
position: 451368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451643:1
position: 451643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452538-452641:1:exon

position:452538:1
position: 452538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452641:1
position: 452641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:452766-452840:1:exon

position:452766:1
position: 452766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452840:1
position: 452840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:453028-453078:1:exon

position:453028:1
position: 453028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453078:1
position: 453078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:453234-453291:1:exon

position:453234:1
position: 453234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118240641
translation: MGNTSAHTRLLNQSNRNVCVFLTQDKLEVDAFIAKLDAPGGMMMSSPRPPTRPGGMVRFGFRGDIAGHCVLASQMCQLLWKENQYVSIFVEDDEKICSKHAVVSVSPDNHVFRGETVTLRCDIQGEGDTGWTNSWYKNNYSIYPYNTYNPYMISSVTQYYSGTYTCSGYRGRDSQSSEISNAVTLTVSVKPTPELTSSLTGAALVGNPVTLHCKLDQSAGWSFYWSRHTQNPENETNTAANSYNISSVAPSDGGQYWCRAGRGNPVYYTHYSDALWVNVTAADSSSLGQISLTVGQSLVVLFILLTLLWCYKTKKNLCVTVLGVSQTSIRHQIRPRESQEKLPTYMTQLSQQTGAAQMNLQTTSVMSLMLRS
SIO_010081: LOC118240641
subclass of: SO_0000673
so part of: LOC118240641
location: join(436903..437202,445277..445541,451368..451643,452538..452641,452766..452840,453028..453078,453234..453281)
location: region:436903-453281:1
so has part: feature:436903-437202:1:exon
so has part: feature:445277-445541:1:exon
so has part: feature:451368-451643:1:exon
so has part: feature:452538-452641:1:exon
so has part: feature:452766-452840:1:exon
so has part: feature:453028-453078:1:exon
so has part: feature:453234-453281:1:exon

XP_035377605.1
type: Protein
SIO_000068: ncbiprotein

position:453281:1
position: 453281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436903-437202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445277-445541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451368-451643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452538-452641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:452766-452840:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453028-453078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453234-453281:1:exon

LOC118240601
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(534017..590627)
location: region:534017-590627:-1
so has part: feature:534017-590627:-1:exon
subclass of: SO_0000011

118240601
type: Gene
SIO_000068: ncbigene

position:534017:-1
position: 534017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590627:-1
position: 590627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534017-590627:-1:exon

LOC118240601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240601
product: uncharacterized LOC118240601, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004775513.1
SIO_010081: LOC118240601
subclass of: SO_0000673
so part of: LOC118240601
location: complement(join(534017..534360,535075..535191,590407..590627))
location: region:534017-590627:-1
so has part: feature:590407-590627:-1:exon
so has part: feature:535075-535191:-1:exon
so has part: feature:534017-534360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590407-590627:-1:exon

position:590407:-1
position: 590407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535075-535191:-1:exon

position:535075:-1
position: 535075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535191:-1
position: 535191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:534017-534360:-1:exon

position:534360:-1
position: 534360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240601
product: uncharacterized LOC118240601, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004775514.1
SIO_010081: LOC118240601
subclass of: SO_0000673
so part of: LOC118240601
location: complement(join(534017..534360,535075..535191,537023..537063))
location: region:534017-537063:-1
so has part: feature:537023-537063:-1:exon
so has part: feature:535075-535191:-1:exon
so has part: feature:534017-534360:-1:exon

position:537063:-1
position: 537063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537023-537063:-1:exon

position:537023:-1
position: 537023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535075-535191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534017-534360:-1:exon

LOC118240613
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544860..546353
location: region:544860-546353:1
so has part: feature:544860-546353:1:exon
subclass of: SO_0000011

118240613
type: Gene
SIO_000068: ncbigene

position:544860:1
position: 544860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546353:1
position: 546353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544860-546353:1:exon

LOC118240613
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240613
product: uncharacterized LOC118240613
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004775528.1
SIO_010081: LOC118240613
subclass of: SO_0000673
so part of: LOC118240613
location: join(544860..544989,545643..545686,546112..546353)
location: region:544860-546353:1
so has part: feature:544860-544989:1:exon
so has part: feature:545643-545686:1:exon
so has part: feature:546112-546353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544860-544989:1:exon

position:544989:1
position: 544989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:545643-545686:1:exon

position:545643:1
position: 545643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545686:1
position: 545686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:546112-546353:1:exon

position:546112:1
position: 546112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240611
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550593..553495
location: region:550593-553495:1
so has part: feature:550593-553495:1:exon
subclass of: SO_0000011

118240611
type: Gene
SIO_000068: ncbigene

position:550593:1
position: 550593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553495:1
position: 553495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550593-553495:1:exon

LOC118240611
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240611
product: uncharacterized LOC118240611, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775526.1
SIO_010081: LOC118240611
subclass of: SO_0000673
so part of: LOC118240611
location: join(550593..550683,552982..553017,553421..553495)
location: region:550593-553495:1
so has part: feature:550593-550683:1:exon
so has part: feature:552982-553017:1:exon
so has part: feature:553421-553495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550593-550683:1:exon

position:550683:1
position: 550683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552982-553017:1:exon

position:552982:1
position: 552982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553017:1
position: 553017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553421-553495:1:exon

position:553421:1
position: 553421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240611
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240611
product: uncharacterized LOC118240611, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004775525.1
SIO_010081: LOC118240611
subclass of: SO_0000673
so part of: LOC118240611
location: join(550593..550683,552982..553017,553338..553361)
location: region:550593-553361:1
so has part: feature:550593-550683:1:exon
so has part: feature:552982-553017:1:exon
so has part: feature:553338-553361:1:exon

position:553361:1
position: 553361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550593-550683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552982-553017:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553338-553361:1:exon

position:553338:1
position: 553338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240608
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 559460..559964
location: region:559460-559964:1
so has part: feature:559460-559964:1:exon
subclass of: SO_0000011

118240608
type: Gene
SIO_000068: ncbigene

position:559460:1
position: 559460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559964:1
position: 559964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559460-559964:1:exon

LOC118240608
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240608
product: uncharacterized LOC118240608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775522.1
SIO_010081: LOC118240608
subclass of: SO_0000673
so part of: LOC118240608
location: join(559460..559561,559667..559741,559929..559964)
location: region:559460-559964:1
so has part: feature:559460-559561:1:exon
so has part: feature:559667-559741:1:exon
so has part: feature:559929-559964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559460-559561:1:exon

position:559561:1
position: 559561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559667-559741:1:exon

position:559667:1
position: 559667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559741:1
position: 559741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559929-559964:1:exon

position:559929:1
position: 559929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240605
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 560479..561884
location: region:560479-561884:1
so has part: feature:560479-561884:1:exon
subclass of: SO_0000011

118240605
type: Gene
SIO_000068: ncbigene

position:560479:1
position: 560479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561884:1
position: 561884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560479-561884:1:exon

LOC118240605
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240605
product: uncharacterized LOC118240605
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775518.1
SIO_010081: LOC118240605
subclass of: SO_0000673
so part of: LOC118240605
location: join(560479..560547,560685..560750,561263..561884)
location: region:560479-561884:1
so has part: feature:560479-560547:1:exon
so has part: feature:560685-560750:1:exon
so has part: feature:561263-561884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560479-560547:1:exon

position:560547:1
position: 560547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:560685-560750:1:exon

position:560685:1
position: 560685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560750:1
position: 560750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561263-561884:1:exon

position:561263:1
position: 561263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240610
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(588982..589478)
location: region:588982-589478:-1
so has part: feature:588982-589478:-1:exon
subclass of: SO_0000011

118240610
type: Gene
SIO_000068: ncbigene

position:588982:-1
position: 588982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589478:-1
position: 589478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588982-589478:-1:exon

LOC118240610
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240610
product: uncharacterized LOC118240610
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004775524.1
SIO_010081: LOC118240610
subclass of: SO_0000673
so part of: LOC118240610
location: complement(join(588982..588999,589187..589261,589386..589478))
location: region:588982-589478:-1
so has part: feature:589386-589478:-1:exon
so has part: feature:589187-589261:-1:exon
so has part: feature:588982-588999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:589386-589478:-1:exon

position:589386:-1
position: 589386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589187-589261:-1:exon

position:589187:-1
position: 589187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589261:-1
position: 589261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:588982-588999:-1:exon

position:588999:-1
position: 588999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240600
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 650427..650926
location: region:650427-650926:1
so has part: feature:650427-650926:1:exon
subclass of: SO_0000011

118240600
type: Gene
SIO_000068: ncbigene

position:650427:1
position: 650427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650926:1
position: 650926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650427-650926:1:exon

LOC118240600
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240600
product: uncharacterized LOC118240600
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004775512.1
SIO_010081: LOC118240600
subclass of: SO_0000673
so part of: LOC118240600
location: join(650427..650510,650634..650708,650896..650926)
location: region:650427-650926:1
so has part: feature:650427-650510:1:exon
so has part: feature:650634-650708:1:exon
so has part: feature:650896-650926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650427-650510:1:exon

position:650510:1
position: 650510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:650634-650708:1:exon

position:650634:1
position: 650634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650708:1
position: 650708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:650896-650926:1:exon

position:650896:1
position: 650896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240609
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 651148..651839
location: region:651148-651839:1
so has part: feature:651148-651839:1:exon
subclass of: SO_0000011

118240609
type: Gene
SIO_000068: ncbigene

position:651148:1
position: 651148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651839:1
position: 651839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651148-651839:1:exon

LOC118240609
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240609
product: uncharacterized LOC118240609
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775523.1
SIO_010081: LOC118240609
subclass of: SO_0000673
so part of: LOC118240609
location: join(651148..651175,651509..651586,651803..651839)
location: region:651148-651839:1
so has part: feature:651148-651175:1:exon
so has part: feature:651509-651586:1:exon
so has part: feature:651803-651839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651148-651175:1:exon

position:651175:1
position: 651175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651509-651586:1:exon

position:651509:1
position: 651509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651586:1
position: 651586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:651803-651839:1:exon

position:651803:1
position: 651803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240604
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(677797..679201)
location: region:677797-679201:-1
so has part: feature:677797-679201:-1:exon
subclass of: SO_0000011

118240604
type: Gene
SIO_000068: ncbigene

position:677797:-1
position: 677797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679201:-1
position: 679201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677797-679201:-1:exon

LOC118240604
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240604
product: uncharacterized LOC118240604
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004775517.1
SIO_010081: LOC118240604
subclass of: SO_0000673
so part of: LOC118240604
location: complement(join(677797..678441,678949..679014,679152..679201))
location: region:677797-679201:-1
so has part: feature:679152-679201:-1:exon
so has part: feature:678949-679014:-1:exon
so has part: feature:677797-678441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:679152-679201:-1:exon

position:679152:-1
position: 679152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678949-679014:-1:exon

position:678949:-1
position: 678949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679014:-1
position: 679014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:677797-678441:-1:exon

position:678441:-1
position: 678441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240642
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 704820..709445
location: region:704820-709445:1
so has part: feature:704820-709445:1:exon

118240642
type: Gene
SIO_000068: ncbigene

position:704820:1
position: 704820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709445:1
position: 709445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704820-709445:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 704820..704963
location: region:704820-704963:1
so has part: feature:704820-704963:1:exon

position:704963:1
position: 704963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704820-704963:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 705158..705223
location: region:705158-705223:1
so has part: feature:705158-705223:1:exon

position:705158:1
position: 705158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705223:1
position: 705223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705158-705223:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 705411..705523
location: region:705411-705523:1
so has part: feature:705411-705523:1:exon

position:705411:1
position: 705411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705523:1
position: 705523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705411-705523:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 705596..705713
location: region:705596-705713:1
so has part: feature:705596-705713:1:exon

position:705596:1
position: 705596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705713:1
position: 705713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705596-705713:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 706109..706330
location: region:706109-706330:1
so has part: feature:706109-706330:1:exon

position:706109:1
position: 706109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706330:1
position: 706330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706109-706330:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 706649..706876
location: region:706649-706876:1
so has part: feature:706649-706876:1:exon

position:706649:1
position: 706649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706876:1
position: 706876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706649-706876:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 707033..707146
location: region:707033-707146:1
so has part: feature:707033-707146:1:exon

position:707033:1
position: 707033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707146:1
position: 707146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707033-707146:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 707382..707513
location: region:707382-707513:1
so has part: feature:707382-707513:1:exon

position:707382:1
position: 707382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707513:1
position: 707513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707382-707513:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 707890..708021
location: region:707890-708021:1
so has part: feature:707890-708021:1:exon

position:707890:1
position: 707890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708021:1
position: 708021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707890-708021:1:exon

LOC118240642
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240642
subclass of: SO_0000673
so part of: LOC118240642
location: 709314..709445
location: region:709314-709445:1
so has part: feature:709314-709445:1:exon

position:709314:1
position: 709314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709314-709445:1:exon

LOC118240594
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(717785..722411)
location: region:717785-722411:-1
so has part: feature:717785-722411:-1:exon
subclass of: SO_0000010

118240594
type: Gene
SIO_000068: ncbigene

position:717785:-1
position: 717785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722411:-1
position: 722411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717785-722411:-1:exon

LOC118240594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240594
product: uncharacterized LOC118240594
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035521506.1
SIO_010081: LOC118240594
subclass of: SO_0000673
so part of: LOC118240594
location: complement(join(717785..718164,718820..719107,719211..719486,719801..719836,722353..722411))
location: region:717785-722411:-1
so has part: feature:722353-722411:-1:exon
so has part: feature:719801-719836:-1:exon
so has part: feature:719211-719486:-1:exon
so has part: feature:718820-719107:-1:exon
so has part: feature:717785-718164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722353-722411:-1:exon

position:722353:-1
position: 722353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719801-719836:-1:exon

position:719801:-1
position: 719801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719836:-1
position: 719836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719211-719486:-1:exon

position:719211:-1
position: 719211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719486:-1
position: 719486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:718820-719107:-1:exon

position:718820:-1
position: 718820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719107:-1
position: 719107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717785-718164:-1:exon

position:718164:-1
position: 718164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240594
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118240594
translation: MELSPLPVVLLLILLVQAGLAQGRPKAVVSVSPDNHVFRGETVTLRCDIQGEGDTGWTYSWYKNNYSIYPNVTYNPYMISSVTQYDRGTYTCRGYRGRDSQSSEISNAVTLTVSERAQAVLSVSPQSWLTERDSVSLSCEVRDSSTGWIFSWYRAVPHVEVLSDSIRGAGGSYTLSPAALHQTGVYMCRAERGEPAYQTQYSNTQPLWITGDHILYHRMPILVLPVMSILFLPVLGRAVPSLKQGSPSTDAPRSLSEAS
SIO_010081: LOC118240594
subclass of: SO_0000673
so part of: LOC118240594
location: complement(join(718016..718164,718820..719107,719211..719486,719801..719836,722353..722383))
location: region:718016-722383:-1
so has part: feature:722353-722383:-1:exon
so has part: feature:719801-719836:-1:exon
so has part: feature:719211-719486:-1:exon
so has part: feature:718820-719107:-1:exon
so has part: feature:718016-718164:-1:exon

XP_035377399.1
type: Protein
SIO_000068: ncbiprotein

position:718016:-1
position: 718016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722383:-1
position: 722383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722353-722383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719801-719836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719211-719486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:718820-719107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:718016-718164:-1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: trnaa-ugc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 725991..726062
location: region:725991-726062:1
so has part: feature:725991-726062:1:exon
subclass of: SO_0000663

118240676
type: Gene
SIO_000068: ncbigene

position:725991:1
position: 725991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726062:1
position: 726062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725991-726062:1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8005
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:726023..726025,aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: 725991..726062
location: region:725991-726062:1
so has part: feature:725991-726062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725991-726062:1:exon

nars1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: nars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740371..746995
location: region:740371-746995:1
so has part: feature:740371-746995:1:exon
subclass of: SO_0000010

113568330
type: Gene
SIO_000068: ncbigene

position:740371:1
position: 740371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746995:1
position: 746995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740371-746995:1:exon

nars1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nars1
product: asparaginyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_026996518.2
SIO_010081: nars1
subclass of: SO_0000673
so part of: nars1
location: join(740371..740544,740986..741068,741263..741328,741520..741612,741702..741791,742238..742316,742598..742668,742921..743007,744227..744448,744764..744963,745224..745359,745495..745608,745886..746017,746357..746488,746651..746995)
location: region:740371-746995:1
so has part: feature:740371-740544:1:exon
so has part: feature:740986-741068:1:exon
so has part: feature:741263-741328:1:exon
so has part: feature:741520-741612:1:exon
so has part: feature:741702-741791:1:exon
so has part: feature:742238-742316:1:exon
so has part: feature:742598-742668:1:exon
so has part: feature:742921-743007:1:exon
so has part: feature:744227-744448:1:exon
so has part: feature:744764-744963:1:exon
so has part: feature:745224-745359:1:exon
so has part: feature:745495-745608:1:exon
so has part: feature:745886-746017:1:exon
so has part: feature:746357-746488:1:exon
so has part: feature:746651-746995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740371-740544:1:exon

position:740544:1
position: 740544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:740986-741068:1:exon

position:740986:1
position: 740986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741068:1
position: 741068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:741263-741328:1:exon

position:741263:1
position: 741263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741328:1
position: 741328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:741520-741612:1:exon

position:741520:1
position: 741520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741612:1
position: 741612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:741702-741791:1:exon

position:741702:1
position: 741702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741791:1
position: 741791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:742238-742316:1:exon

position:742238:1
position: 742238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742316:1
position: 742316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:742598-742668:1:exon

position:742598:1
position: 742598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742668:1
position: 742668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:742921-743007:1:exon

position:742921:1
position: 742921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743007:1
position: 743007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:744227-744448:1:exon

position:744227:1
position: 744227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744448:1
position: 744448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:744764-744963:1:exon

position:744764:1
position: 744764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744963:1
position: 744963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:745224-745359:1:exon

position:745224:1
position: 745224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745359:1
position: 745359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:745495-745608:1:exon

position:745495:1
position: 745495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745608:1
position: 745608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:745886-746017:1:exon

position:745886:1
position: 745886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746017:1
position: 746017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:746357-746488:1:exon

position:746357:1
position: 746357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746488:1
position: 746488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:746651-746995:1:exon

position:746651:1
position: 746651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nars1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asparagine--tRNA ligase, cytoplasmic
translation: MADEVIQITHNMSLREVYVSDKHGSDESGDGTEHKPFKTPLKALLFAGKEPWPTIYVDAQKDGERWAVISKTQMKNTKKLFHRGQQKTDAKDMKEAEDAERREKNLEDAKKIVIENNPSLPDPQTAKIYQLEALRGKRVKVFGWVHRLRRQGKNLLFIVLRDGTGFLQCVLTDNLCQCYNGLVLSTESTVALYGTIKTVPKGKQAPGGHELHCDFWELIGLAPAGGADNLVNEESDVDVQLNNRHMMIRGENVSKILRVRSTLTQCFRDHFFSRGYYEITPPTLVQTQVEGGSTLFSLNYFGEQAYLTQSSQLYLETCIPALGDTFCIAQSYRAEQSRTRRHLSEYTHIEAECPFMTFEDLLSRLEDLVCDVVDRVLKSPIAPLLYDLNPNFKPPTRPFKRMNYTEAIDWLKEHDVRKDDGTHYEFGEDIPEAPERLMTDTINETILLCRFPAEIKSFYMQRCPDDRRLTESVDVLMPNVGEIVGGSMRIWDAEELLEGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWLLNRNHIRDVCLYPRFIQRCRP
SIO_010081: nars1
subclass of: SO_0000673
so part of: nars1
location: join(740502..740544,740986..741068,741263..741328,741520..741612,741702..741791,742238..742316,742598..742668,742921..743007,744227..744448,744764..744963,745224..745359,745495..745608,745886..746017,746357..746488,746651..746782)
location: region:740502-746782:1
so has part: feature:740502-740544:1:exon
so has part: feature:740986-741068:1:exon
so has part: feature:741263-741328:1:exon
so has part: feature:741520-741612:1:exon
so has part: feature:741702-741791:1:exon
so has part: feature:742238-742316:1:exon
so has part: feature:742598-742668:1:exon
so has part: feature:742921-743007:1:exon
so has part: feature:744227-744448:1:exon
so has part: feature:744764-744963:1:exon
so has part: feature:745224-745359:1:exon
so has part: feature:745495-745608:1:exon
so has part: feature:745886-746017:1:exon
so has part: feature:746357-746488:1:exon
so has part: feature:746651-746782:1:exon

XP_026852319.1
type: Protein
SIO_000068: ncbiprotein

position:740502:1
position: 740502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746782:1
position: 746782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740502-740544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740986-741068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741263-741328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741520-741612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741702-741791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742238-742316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742598-742668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:742921-743007:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744227-744448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:744764-744963:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745224-745359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:745495-745608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:745886-746017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:746357-746488:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:746651-746782:1:exon

LOC113568329
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 747497..749854
location: region:747497-749854:1
so has part: feature:747497-749854:1:exon
subclass of: SO_0000011

113568329
type: Gene
SIO_000068: ncbigene

position:747497:1
position: 747497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749854:1
position: 749854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747497-749854:1:exon

LOC113568329
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC113568329
product: uncharacterized LOC113568329
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003409578.2
SIO_010081: LOC113568329
subclass of: SO_0000673
so part of: LOC113568329
location: join(747497..747778,749067..749130,749722..749854)
location: region:747497-749854:1
so has part: feature:747497-747778:1:exon
so has part: feature:749067-749130:1:exon
so has part: feature:749722-749854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:747497-747778:1:exon

position:747778:1
position: 747778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749067-749130:1:exon

position:749067:1
position: 749067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749130:1
position: 749130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:749722-749854:1:exon

position:749722:1
position: 749722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113568811
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(763129..>770881)
location: region:763129-770881:-1
so has part: feature:763129-770881:-1:exon
subclass of: SO_0000010

113568811
type: Gene
SIO_000068: ncbigene

position:763129:-1
position: 763129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770881:-1
position: 770881
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763129-770881:-1:exon

LOC113568811
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113568811
product: basement membrane-specific heparan sulfate proteoglycan core protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521508.1
SIO_010081: LOC113568811
subclass of: SO_0000673
so part of: LOC113568811
location: complement(join(763129..763500,763989..764083,764298..764375,765549..765611,765918..765992,766098..766220,767144..767422,768963..769211,769600..769878,770169..770507,770611..>770881))
location: region:763129-770881:-1
so has part: feature:770611-770881:-1:exon
so has part: feature:770169-770507:-1:exon
so has part: feature:769600-769878:-1:exon
so has part: feature:768963-769211:-1:exon
so has part: feature:767144-767422:-1:exon
so has part: feature:766098-766220:-1:exon
so has part: feature:765918-765992:-1:exon
so has part: feature:765549-765611:-1:exon
so has part: feature:764298-764375:-1:exon
so has part: feature:763989-764083:-1:exon
so has part: feature:763129-763500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770611-770881:-1:exon

position:770611:-1
position: 770611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770169-770507:-1:exon

position:770169:-1
position: 770169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770507:-1
position: 770507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:769600-769878:-1:exon

position:769600:-1
position: 769600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769878:-1
position: 769878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:768963-769211:-1:exon

position:768963:-1
position: 768963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769211:-1
position: 769211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:767144-767422:-1:exon

position:767144:-1
position: 767144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767422:-1
position: 767422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:766098-766220:-1:exon

position:766098:-1
position: 766098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766220:-1
position: 766220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:765918-765992:-1:exon

position:765918:-1
position: 765918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765992:-1
position: 765992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:765549-765611:-1:exon

position:765549:-1
position: 765549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765611:-1
position: 765611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:764298-764375:-1:exon

position:764298:-1
position: 764298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764375:-1
position: 764375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:763989-764083:-1:exon

position:763989:-1
position: 763989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764083:-1
position: 764083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:763129-763500:-1:exon

position:763500:-1
position: 763500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113568811
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113568811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basement membrane-specific heparan sulfate proteoglycan core protein-like
translation: VKAVVSVSPDNHVFRGETVTLRCDIRLEGDTGWTYSWYKDGNSIYPYVTSNTYTFNFVVQYDSGTYTCRGYRGRDSQSSEISNAITLTVSVIPQAVLSVSPQIWLTEGDSVSLSCEVRDSSTGWTFSWYRAVPYRECVTPVTDIHDSVRYCVELLSDSIRGAGGSYTLSPAALHHTGVYVCRAERGEPAYQTQYSNTQPLWITGLSPPDSLIISPSRTQHFSGDSLSLSCEGQSDSPGWRVRRYTHSGNVSDCSSLWGSVTGSTCTIGYLYTSHTGVYWCQSESGGSSNPVNITVHNGDVILESSVHPVTEGDPLTLHCLLHPNITSHLRADLYKDGSLIQTQTAGEITIHTVSKSDEGVYYCKHPERGESPHSWVSVRAVKPTPKLTSSLKGAALVGNPVTLHCKLDQPAGWSFYWSRRTQNPENETNTATNSYTISSVAPSDGGQYWCRAGRGNPVYYTNYSDVLWVNVTAGDSSSLGLFGLAVGPSLVVFFILLTLLWSHKNNKGLRSAAESLCRCPGSQSDINQTSDQTQRESGDDLSDVTYAQVMKHNKKSRNKDTGAGPSEVTYAEIKLKPKQKAKKKEEKSSVGADTVYSELRQDSHKGQSSKIYGIISEVVEEQHRLLGNRVHPPMLLAKAKYSRLQQEGVL
SIO_010081: LOC113568811
subclass of: SO_0000673
so part of: LOC113568811
location: complement(join(763399..763500,763989..764083,764298..764375,765549..765611,765918..765992,766098..766220,767144..767422,768963..769211,769600..769878,770169..770507,770611..>770881))
location: region:763399-770881:-1
so has part: feature:770611-770881:-1:exon
so has part: feature:770169-770507:-1:exon
so has part: feature:769600-769878:-1:exon
so has part: feature:768963-769211:-1:exon
so has part: feature:767144-767422:-1:exon
so has part: feature:766098-766220:-1:exon
so has part: feature:765918-765992:-1:exon
so has part: feature:765549-765611:-1:exon
so has part: feature:764298-764375:-1:exon
so has part: feature:763989-764083:-1:exon
so has part: feature:763399-763500:-1:exon

XP_035377401.1
type: Protein
SIO_000068: ncbiprotein

position:763399:-1
position: 763399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770611-770881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770169-770507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:769600-769878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768963-769211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:767144-767422:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766098-766220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:765918-765992:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:765549-765611:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764298-764375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:763989-764083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:763399-763500:-1:exon

LOC113568751
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 807949..812500
location: region:807949-812500:1
so has part: feature:807949-812500:1:exon
subclass of: SO_0000010

113568751
type: Gene
SIO_000068: ncbigene

position:807949:1
position: 807949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812500:1
position: 812500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807949-812500:1:exon

LOC113568751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113568751
product: basement membrane-specific heparan sulfate proteoglycan core protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521713.1
SIO_010081: LOC113568751
subclass of: SO_0000673
so part of: LOC113568751
location: join(807949..808007,808484..808764,810370..810645,811306..811422,812128..812235,812352..812500)
location: region:807949-812500:1
so has part: feature:807949-808007:1:exon
so has part: feature:808484-808764:1:exon
so has part: feature:810370-810645:1:exon
so has part: feature:811306-811422:1:exon
so has part: feature:812128-812235:1:exon
so has part: feature:812352-812500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807949-808007:1:exon

position:808007:1
position: 808007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808484-808764:1:exon

position:808484:1
position: 808484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808764:1
position: 808764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:810370-810645:1:exon

position:810370:1
position: 810370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810645:1
position: 810645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:811306-811422:1:exon

position:811306:1
position: 811306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811422:1
position: 811422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:812128-812235:1:exon

position:812128:1
position: 812128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812235:1
position: 812235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:812352-812500:1:exon

position:812352:1
position: 812352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113568751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113568751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basement membrane-specific heparan sulfate proteoglycan core protein-like
translation: METNDNLEVTRLLGKRGTLRLTVEPQSPVFTGESVTLKCEVQGYDAWTYQWYKKKAQSQWTTVSQSVFDTVNRDTLTISRDAVVNGDQYQCRGARNNRPTTSQYSNTVTLTVHVKPTPELTSSLKGAALVGNPVTLHCKLDQSAGWSFYWSRHTQNPENETNTAANSYNISSVAPSDGGQYWCRAGRGNPVYYTNYSDAIWVNVTALSHSEAPFSILSRLSSLLAVSPYLLVSIVLGVKCYRAHALTETRSQNAVSEE
SIO_010081: LOC113568751
subclass of: SO_0000673
so part of: LOC113568751
location: join(807949..808007,808484..808764,810370..810645,811306..811422,812128..812171)
location: region:807949-812171:1
so has part: feature:807949-808007:1:exon
so has part: feature:808484-808764:1:exon
so has part: feature:810370-810645:1:exon
so has part: feature:811306-811422:1:exon
so has part: feature:812128-812171:1:exon

XP_035377606.1
type: Protein
SIO_000068: ncbiprotein

position:812171:1
position: 812171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807949-808007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808484-808764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:810370-810645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811306-811422:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:812128-812171:1:exon

LOC118240596
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1206383..1207549)
location: region:1206383-1207549:-1
so has part: feature:1206383-1207549:-1:exon
subclass of: SO_0000011

118240596
type: Gene
SIO_000068: ncbigene

position:1206383:-1
position: 1206383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207549:-1
position: 1207549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206383-1207549:-1:exon

LOC118240596
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240596
product: uncharacterized LOC118240596
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004775507.1
SIO_010081: LOC118240596
subclass of: SO_0000673
so part of: LOC118240596
location: complement(join(1206383..1206625,1206980..1207258,1207518..1207549))
location: region:1206383-1207549:-1
so has part: feature:1207518-1207549:-1:exon
so has part: feature:1206980-1207258:-1:exon
so has part: feature:1206383-1206625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207518-1207549:-1:exon

position:1207518:-1
position: 1207518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1206980-1207258:-1:exon

position:1206980:-1
position: 1206980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207258:-1
position: 1207258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206383-1206625:-1:exon

position:1206625:-1
position: 1206625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240603
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1208200..1240923)
location: region:1208200-1240923:-1
so has part: feature:1208200-1240923:-1:exon
subclass of: SO_0000011

118240603
type: Gene
SIO_000068: ncbigene

position:1208200:-1
position: 1208200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240923:-1
position: 1240923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208200-1240923:-1:exon

LOC118240603
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240603
product: uncharacterized LOC118240603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004775516.1
SIO_010081: LOC118240603
subclass of: SO_0000673
so part of: LOC118240603
location: complement(join(1208200..1208232,1208823..1208858,1240877..1240923))
location: region:1208200-1240923:-1
so has part: feature:1240877-1240923:-1:exon
so has part: feature:1208823-1208858:-1:exon
so has part: feature:1208200-1208232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240877-1240923:-1:exon

position:1240877:-1
position: 1240877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208823-1208858:-1:exon

position:1208823:-1
position: 1208823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208858:-1
position: 1208858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208200-1208232:-1:exon

position:1208232:-1
position: 1208232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240612
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1256612..1257142
location: region:1256612-1257142:1
so has part: feature:1256612-1257142:1:exon
subclass of: SO_0000011

118240612
type: Gene
SIO_000068: ncbigene

position:1256612:1
position: 1256612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257142:1
position: 1257142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256612-1257142:1:exon

LOC118240612
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240612
product: uncharacterized LOC118240612
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004775527.1
SIO_010081: LOC118240612
subclass of: SO_0000673
so part of: LOC118240612
location: join(1256612..1256740,1256865..1257142)
location: region:1256612-1257142:1
so has part: feature:1256612-1256740:1:exon
so has part: feature:1256865-1257142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1256612-1256740:1:exon

position:1256740:1
position: 1256740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1256865-1257142:1:exon

position:1256865:1
position: 1256865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tnfrsfa
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: tnfrsfa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1402111..1425928)
location: region:1402111-1425928:-1
so has part: feature:1402111-1425928:-1:exon
subclass of: SO_0000010

113568408
type: Gene
SIO_000068: ncbigene

position:1402111:-1
position: 1402111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425928:-1
position: 1425928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402111-1425928:-1:exon

tnfrsfa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: tnfrsfa
product: tumor necrosis factor receptor superfamily, member a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_035521638.1
SIO_010081: tnfrsfa
subclass of: SO_0000673
so part of: tnfrsfa
location: complement(join(1402111..1402979,1403235..1403271,1403820..1404122,1404225..1404265,1404495..1404581,1404734..1404888,1405751..1405862,1407774..1407902,1409005..1409164,1425688..1425928))
location: region:1402111-1425928:-1
so has part: feature:1425688-1425928:-1:exon
so has part: feature:1409005-1409164:-1:exon
so has part: feature:1407774-1407902:-1:exon
so has part: feature:1405751-1405862:-1:exon
so has part: feature:1404734-1404888:-1:exon
so has part: feature:1404495-1404581:-1:exon
so has part: feature:1404225-1404265:-1:exon
so has part: feature:1403820-1404122:-1:exon
so has part: feature:1403235-1403271:-1:exon
so has part: feature:1402111-1402979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1425688-1425928:-1:exon

position:1425688:-1
position: 1425688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409005-1409164:-1:exon

position:1409005:-1
position: 1409005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409164:-1
position: 1409164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1407774-1407902:-1:exon

position:1407774:-1
position: 1407774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407902:-1
position: 1407902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1405751-1405862:-1:exon

position:1405751:-1
position: 1405751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405862:-1
position: 1405862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1404734-1404888:-1:exon

position:1404734:-1
position: 1404734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404888:-1
position: 1404888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1404495-1404581:-1:exon

position:1404495:-1
position: 1404495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404581:-1
position: 1404581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1404225-1404265:-1:exon

position:1404225:-1
position: 1404225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404265:-1
position: 1404265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1403820-1404122:-1:exon

position:1403820:-1
position: 1403820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404122:-1
position: 1404122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1403235-1403271:-1:exon

position:1403235:-1
position: 1403235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403271:-1
position: 1403271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1402111-1402979:-1:exon

position:1402979:-1
position: 1402979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tnfrsfa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: tnfrsfa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily, member a
translation: MLGSSPYRSRTARDAMKRTVFVLLVVTVVGGGSVELVNPRPRESQNRTAGQMVCREDEEYSHNGFCCKNCEAGTYVSGKCSADQQKGTCQPCEHGTYAEHPTGMEQCLQCSQCHLDQVRTAACTSVKNTQCECKPGFFCRPNEPCEVCTRCSRCRGDEVEAQACTPTSNTKCRKHSTLASEPTEKTVASPTHLPTPENGSTWIIVPVVLLSVLVVIAVGVLLWKQKKCLCETEASPVAPDDEVKIPIDGVCVSSAEEQENSRNAGLEAVEELRPESRPLLQETQGKSMPVEDEDRGLGDSLPNTTSSSQTSLSALPVMVPPMVESPPQSPPTQRQACTGLQDPEPWAKDDGPPRRLVPLQGEEVSLSKSFDLFDVLDVRVHNKFFRSIGVSDNAIRQAEALHAADKVYELLRGWMQHKGLRASINDLLDALLQLDQRWSAEQIASKAVERGYYKYE
SIO_010081: tnfrsfa
subclass of: SO_0000673
so part of: tnfrsfa
location: complement(join(1402690..1402979,1403235..1403271,1403820..1404122,1404225..1404265,1404495..1404581,1404734..1404888,1405751..1405862,1407774..1407902,1409005..1409164,1425688..1425744))
location: region:1402690-1425744:-1
so has part: feature:1425688-1425744:-1:exon
so has part: feature:1409005-1409164:-1:exon
so has part: feature:1407774-1407902:-1:exon
so has part: feature:1405751-1405862:-1:exon
so has part: feature:1404734-1404888:-1:exon
so has part: feature:1404495-1404581:-1:exon
so has part: feature:1404225-1404265:-1:exon
so has part: feature:1403820-1404122:-1:exon
so has part: feature:1403235-1403271:-1:exon
so has part: feature:1402690-1402979:-1:exon

XP_035377531.1
type: Protein
SIO_000068: ncbiprotein

position:1402690:-1
position: 1402690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425744:-1
position: 1425744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1425688-1425744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409005-1409164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1407774-1407902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1405751-1405862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1404734-1404888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1404495-1404581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1404225-1404265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1403820-1404122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1403235-1403271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1402690-1402979:-1:exon

unc5da
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: unc5da
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1444618..1599264)
location: region:1444618-1599264:-1
so has part: feature:1444618-1599264:-1:exon
subclass of: SO_0000010

113590762
type: Gene
SIO_000068: ncbigene

position:1444618:-1
position: 1444618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599264:-1
position: 1599264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444618-1599264:-1:exon

unc5da
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: unc5da
product: unc-5 netrin receptor Da
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035521152.1
SIO_010081: unc5da
subclass of: SO_0000673
so part of: unc5da
location: complement(join(1444618..1445441,1448631..1448809,1449362..1449526,1450421..1450570,1452018..1452245,1457149..1457320,1469321..1469405,1470738..1471115,1473782..1473970,1474277..1474312,1474915..1475079,1480332..1480499,1481877..1482057,1488783..1488886,1489312..1489455,1497061..1497261,1598875..1599264))
location: region:1444618-1599264:-1
so has part: feature:1598875-1599264:-1:exon
so has part: feature:1497061-1497261:-1:exon
so has part: feature:1489312-1489455:-1:exon
so has part: feature:1488783-1488886:-1:exon
so has part: feature:1481877-1482057:-1:exon
so has part: feature:1480332-1480499:-1:exon
so has part: feature:1474915-1475079:-1:exon
so has part: feature:1474277-1474312:-1:exon
so has part: feature:1473782-1473970:-1:exon
so has part: feature:1470738-1471115:-1:exon
so has part: feature:1469321-1469405:-1:exon
so has part: feature:1457149-1457320:-1:exon
so has part: feature:1452018-1452245:-1:exon
so has part: feature:1450421-1450570:-1:exon
so has part: feature:1449362-1449526:-1:exon
so has part: feature:1448631-1448809:-1:exon
so has part: feature:1444618-1445441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1598875-1599264:-1:exon

position:1598875:-1
position: 1598875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1497061-1497261:-1:exon

position:1497061:-1
position: 1497061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497261:-1
position: 1497261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1489312-1489455:-1:exon

position:1489312:-1
position: 1489312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489455:-1
position: 1489455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1488783-1488886:-1:exon

position:1488783:-1
position: 1488783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488886:-1
position: 1488886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1481877-1482057:-1:exon

position:1481877:-1
position: 1481877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482057:-1
position: 1482057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1480332-1480499:-1:exon

position:1480332:-1
position: 1480332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480499:-1
position: 1480499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1474915-1475079:-1:exon

position:1474915:-1
position: 1474915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1475079:-1
position: 1475079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1474277-1474312:-1:exon

position:1474277:-1
position: 1474277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1474312:-1
position: 1474312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1473782-1473970:-1:exon

position:1473782:-1
position: 1473782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473970:-1
position: 1473970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1470738-1471115:-1:exon

position:1470738:-1
position: 1470738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471115:-1
position: 1471115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1469321-1469405:-1:exon

position:1469321:-1
position: 1469321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469405:-1
position: 1469405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1457149-1457320:-1:exon

position:1457149:-1
position: 1457149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457320:-1
position: 1457320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1452018-1452245:-1:exon

position:1452018:-1
position: 1452018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452245:-1
position: 1452245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1450421-1450570:-1:exon

position:1450421:-1
position: 1450421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450570:-1
position: 1450570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1449362-1449526:-1:exon

position:1449362:-1
position: 1449362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449526:-1
position: 1449526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1448631-1448809:-1:exon

position:1448631:-1
position: 1448631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448809:-1
position: 1448809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1444618-1445441:-1:exon

position:1445441:-1
position: 1445441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

unc5da
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: unc5da
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unc-5 netrin receptor Da
translation: MGQLWEVRGLFVGILAALGLLVASTLARGNRDGLSALSGTLPRFLQEPDDAYIVKSNPIKLQCRARPALQIFFKCNGEWVHQNQHTSLEHLDLVTGLKIREVMINISRQQVEDFHGPEDFWCLCVAWSHLGTSKSRRATVRIAYLRKNFEEEPQGKEAPIKGMVVLHCRPPEGVPQAEVQWLKNEEPIGSRDDANIDTRAGHNLIINEARLSDSGNYTCLASNVVARRRSASATVTVYVNGGWSSWTDWSECSVQCGRGLQRRSRTCTNPAPLNGGAFCEGVSVQKSACSSPCPVDGGWATWSAWSVCSAECEMQRSRDCTEPEPKHGGRLCDGVAVATGNCTGDLCIQDKKLLHNMKVPQAEMESNNNVALYSGLAVGVVTVVVLVIVVTLYRRSQSEYGVDVIDSSALTGGFQSFSFKGNRQGNPLLMNSSMPPDLTLSRSYVSPMCFPHTLHKEPISQPPLFQPLPDVKVKVHNSFMVSLGVAQRAEYHHQPLPQTFPRGMSQDLGVRGATLAPRLGVGPGTHAARPLVRASALFGHGGGRLVVPNAGVSLLVPPGSMAEDTSWEIFMSINQEDTCSVLSEPREVLLGPEVTYGPPGLDLSCPVAMTIAHCADGSADDWSVKLKRRTRDDCWEDVMCLEEDSSSCYCLLESRCCHLLVDRPGCYALVGEPLSERAGKRLRVAAFGCLLTDNLTYSLRVYCVDDTPHALQEVLWSERSHGGHLLEESEVLLFRSTSFSLQISIQDIPPFLWSIKPFATCQEFTFSQVWCSNKSVLKCAFTLERYSPTANQLSCKIIVRQVKGQEQILQVYTTVAESQKDAVLSLAQPDCTITSQTGARAFKIPPSIRQKICATFDTANAKAKDWQLLAQYLHIDRNLGYFAWQASPSAAILCLWEVLHQDIGDLDSLASALEEIGRVHRSRQTVMAPTGPPEQAGGVAGEGGGPTHPERTAGTLPLSHGKQPADMGSLDISKAPPSLDINNAPPSLESSENSPSFLSLDQSKHRPMETAGGSVTPDHPKPPAASTTLGIAKAPPPSAPIGHYSDDLDSDHT
SIO_010081: unc5da
subclass of: SO_0000673
so part of: unc5da
location: complement(join(1444910..1445441,1448631..1448809,1449362..1449526,1450421..1450570,1452018..1452245,1457149..1457320,1469321..1469405,1470738..1471115,1473782..1473970,1474277..1474312,1474915..1475079,1480332..1480499,1481877..1482057,1488783..1488886,1489312..1489455,1497061..1497261,1598875..1598959))
location: region:1444910-1598959:-1
so has part: feature:1598875-1598959:-1:exon
so has part: feature:1497061-1497261:-1:exon
so has part: feature:1489312-1489455:-1:exon
so has part: feature:1488783-1488886:-1:exon
so has part: feature:1481877-1482057:-1:exon
so has part: feature:1480332-1480499:-1:exon
so has part: feature:1474915-1475079:-1:exon
so has part: feature:1474277-1474312:-1:exon
so has part: feature:1473782-1473970:-1:exon
so has part: feature:1470738-1471115:-1:exon
so has part: feature:1469321-1469405:-1:exon
so has part: feature:1457149-1457320:-1:exon
so has part: feature:1452018-1452245:-1:exon
so has part: feature:1450421-1450570:-1:exon
so has part: feature:1449362-1449526:-1:exon
so has part: feature:1448631-1448809:-1:exon
so has part: feature:1444910-1445441:-1:exon

XP_035377045.1
type: Protein
SIO_000068: ncbiprotein

position:1444910:-1
position: 1444910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598959:-1
position: 1598959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598875-1598959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1497061-1497261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1489312-1489455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1488783-1488886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1481877-1482057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480332-1480499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1474915-1475079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1474277-1474312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473782-1473970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470738-1471115:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1469321-1469405:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1457149-1457320:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1452018-1452245:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1450421-1450570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1449362-1449526:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1448631-1448809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1444910-1445441:-1:exon

LOC113591655
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113591655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1680613..1691948
location: region:1680613-1691948:1
so has part: feature:1680613-1691948:1:exon
subclass of: SO_0000011

113591655
type: Gene
SIO_000068: ncbigene

position:1680613:1
position: 1680613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691948:1
position: 1691948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680613-1691948:1:exon

LOC113591655
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC113591655
product: uncharacterized LOC113591655
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003412222.2
SIO_010081: LOC113591655
subclass of: SO_0000673
so part of: LOC113591655
location: join(1680613..1680745,1686571..1686767,1691661..1691948)
location: region:1680613-1691948:1
so has part: feature:1680613-1680745:1:exon
so has part: feature:1686571-1686767:1:exon
so has part: feature:1691661-1691948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1680613-1680745:1:exon

position:1680745:1
position: 1680745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1686571-1686767:1:exon

position:1686571:1
position: 1686571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686767:1
position: 1686767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1691661-1691948:1:exon

position:1691661:1
position: 1691661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240553
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1785025..1799635
location: region:1785025-1799635:1
so has part: feature:1785025-1799635:1:exon
subclass of: SO_0000010

118240553
type: Gene
SIO_000068: ncbigene

position:1785025:1
position: 1785025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799635:1
position: 1799635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785025-1799635:1:exon

LOC118240553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240553
product: NACHT, LRR and PYD domains-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521284.1
SIO_010081: LOC118240553
subclass of: SO_0000673
so part of: LOC118240553
location: join(1785025..1785066,1785193..1785222,1785343..1787236,1792277..1792450,1793204..1793377,1795571..1795744,1798957..1799003,1799097..1799635)
location: region:1785025-1799635:1
so has part: feature:1785025-1785066:1:exon
so has part: feature:1785193-1785222:1:exon
so has part: feature:1785343-1787236:1:exon
so has part: feature:1792277-1792450:1:exon
so has part: feature:1793204-1793377:1:exon
so has part: feature:1795571-1795744:1:exon
so has part: feature:1798957-1799003:1:exon
so has part: feature:1799097-1799635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1785025-1785066:1:exon

position:1785066:1
position: 1785066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1785193-1785222:1:exon

position:1785193:1
position: 1785193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785222:1
position: 1785222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1785343-1787236:1:exon

position:1785343:1
position: 1785343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787236:1
position: 1787236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1792277-1792450:1:exon

position:1792277:1
position: 1792277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792450:1
position: 1792450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1793204-1793377:1:exon

position:1793204:1
position: 1793204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793377:1
position: 1793377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1795571-1795744:1:exon

position:1795571:1
position: 1795571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795744:1
position: 1795744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1798957-1799003:1:exon

position:1798957:1
position: 1798957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799003:1
position: 1799003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1799097-1799635:1:exon

position:1799097:1
position: 1799097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like
translation: MKHKTRLRKKFKFICEGDSKIEHKTLFQKIYTGLFITERQSRMERECDHEVHQIERKFSTQSKHYTPIHCNDIFIEIPKWKPNTEPKEEVEGEAEAEEEQDIRTVLTKGIAGIGKTVSVQKFIVDWAEGRANQHIDLVLVMPFRELNVVEADEFSLYKLICIFNPELKGLCKKMYEEFKIVFIFDGLDEFYCPLNFHQKLVSDITEISTVGTLITNLIKGILLPSSHIWVTSRPAAADQIPSQYISRLTEVQGFNDLQKEEYFRKKIGDEDQANKIISHIKTSQSLYIMCHIPVFCWITATLLQQILNEDSFTEIPKTLTEMYTHFLFIQTRIKNQKYDKKEVNDPKHLMRSNKEVILKLAELAFKQLIKGKVVFSEEDLRECGIDVTEASLYSGICTEIFKEESVLYERKVYCFVHLSFQEFLAAVYVLNCHLNQNIEALQFFMHDESNDVGQSEGGPVAGISLDELLKRAVNKALQSQNGHLDLFLRFLLGISLETNQKYLQGLLAVKNNNSKSIKKTIRYIQNQIKGDDDFGRKRMPNMNADSSINLYLCLSEMNDQSLHRDIQNYLKSNERTEYLSPAHCSAIAYMLQISENVLDELDLKKYNTSEEGYRRLVPAVGNCRKALLAGCYLTEQSCETVGTLLQLKNSPLKELDISRNNLQDSGVKLLSDGLRSSYCKLELLRLLGCNLSEQSCENVATSLLSASTSLKELDLSYNDLKDSGVSLLSAGLSSSHCKLEILRLTVCNLTEISGEILALSLQSPSSLLKELELCNNDLHDSGIKMLSYGLKNLHCKLEILRMDHGGEFRIKPGLKKYACNLTLDPNTAHAYLSLSEGNRKVTCQREQQLYPDHPDRFDCRFQVLSKEGTSGRPYWETEWSGDTDIAATYKGISKKGRSRKCRFGYNTQSWRISCYSSSYSACHNDKSIEIPAPPSRSHRVGVYLDWPAGTLSFYNISADAHTLTHIYTFHSRFTEPLYAGFGFTFDSVVCLCPME
SIO_010081: LOC118240553
subclass of: SO_0000673
so part of: LOC118240553
location: join(1785357..1787236,1792277..1792450,1793204..1793377,1795571..1795744,1798957..1799003,1799097..1799635)
location: region:1785357-1799635:1
so has part: feature:1785357-1787236:1:exon
so has part: feature:1792277-1792450:1:exon
so has part: feature:1793204-1793377:1:exon
so has part: feature:1795571-1795744:1:exon
so has part: feature:1798957-1799003:1:exon
so has part: feature:1799097-1799635:1:exon

XP_035377177.1
type: Protein
SIO_000068: ncbiprotein

position:1785357:1
position: 1785357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785357-1787236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1792277-1792450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1793204-1793377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1795571-1795744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798957-1799003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1799097-1799635:1:exon

LOC113568713
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1814326..1877431
location: region:1814326-1877431:1
so has part: feature:1814326-1877431:1:exon

113568713
type: Gene
SIO_000068: ncbigene

position:1814326:1
position: 1814326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877431:1
position: 1877431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814326-1877431:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1814326..1814443
location: region:1814326-1814443:1
so has part: feature:1814326-1814443:1:exon

position:1814443:1
position: 1814443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814326-1814443:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1817120..1818890
location: region:1817120-1818890:1
so has part: feature:1817120-1818890:1:exon

position:1817120:1
position: 1817120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1818890:1
position: 1818890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1817120-1818890:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1827167..1827343
location: region:1827167-1827343:1
so has part: feature:1827167-1827343:1:exon

position:1827167:1
position: 1827167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827343:1
position: 1827343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1827167-1827343:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1831485..1831661
location: region:1831485-1831661:1
so has part: feature:1831485-1831661:1:exon

position:1831485:1
position: 1831485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831661:1
position: 1831661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1831485-1831661:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1832356..1832476
location: region:1832356-1832476:1
so has part: feature:1832356-1832476:1:exon

position:1832356:1
position: 1832356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832476:1
position: 1832476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832356-1832476:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1846790..1846878
location: region:1846790-1846878:1
so has part: feature:1846790-1846878:1:exon

position:1846790:1
position: 1846790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846878:1
position: 1846878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1846790-1846878:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1850585..1850632
location: region:1850585-1850632:1
so has part: feature:1850585-1850632:1:exon

position:1850585:1
position: 1850585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850632:1
position: 1850632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1850585-1850632:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1863059..1863114
location: region:1863059-1863114:1
so has part: feature:1863059-1863114:1:exon

position:1863059:1
position: 1863059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863114:1
position: 1863114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863059-1863114:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1863241..1863270
location: region:1863241-1863270:1
so has part: feature:1863241-1863270:1:exon

position:1863241:1
position: 1863241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863270:1
position: 1863270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863241-1863270:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1863391..1865280
location: region:1863391-1865280:1
so has part: feature:1863391-1865280:1:exon

position:1863391:1
position: 1863391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865280:1
position: 1865280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863391-1865280:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1870296..1870469
location: region:1870296-1870469:1
so has part: feature:1870296-1870469:1:exon

position:1870296:1
position: 1870296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870469:1
position: 1870469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870296-1870469:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1871193..1871366
location: region:1871193-1871366:1
so has part: feature:1871193-1871366:1:exon

position:1871193:1
position: 1871193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871366:1
position: 1871366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1871193-1871366:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1873575..1873750
location: region:1873575-1873750:1
so has part: feature:1873575-1873750:1:exon

position:1873575:1
position: 1873575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1873750:1
position: 1873750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1873575-1873750:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1873931..1874104
location: region:1873931-1874104:1
so has part: feature:1873931-1874104:1:exon

position:1873931:1
position: 1873931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1874104:1
position: 1874104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1873931-1874104:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1876755..1876801
location: region:1876755-1876801:1
so has part: feature:1876755-1876801:1:exon

position:1876755:1
position: 1876755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876801:1
position: 1876801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876755-1876801:1:exon

LOC113568713
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113568713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113568713
subclass of: SO_0000673
so part of: LOC113568713
location: 1876893..1877431
location: region:1876893-1877431:1
so has part: feature:1876893-1877431:1:exon

position:1876893:1
position: 1876893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876893-1877431:1:exon

LOC118240632
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1888683..1889125
location: region:1888683-1889125:1
so has part: feature:1888683-1889125:1:exon
subclass of: SO_0000011

118240632
type: Gene
SIO_000068: ncbigene

position:1888683:1
position: 1888683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889125:1
position: 1889125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1888683-1889125:1:exon

LOC118240632
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240632
product: uncharacterized LOC118240632
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004775540.1
SIO_010081: LOC118240632
subclass of: SO_0000673
so part of: LOC118240632
location: join(1888683..1888712,1888864..1888919,1889085..1889125)
location: region:1888683-1889125:1
so has part: feature:1888683-1888712:1:exon
so has part: feature:1888864-1888919:1:exon
so has part: feature:1889085-1889125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1888683-1888712:1:exon

position:1888712:1
position: 1888712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1888864-1888919:1:exon

position:1888864:1
position: 1888864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888919:1
position: 1888919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1889085-1889125:1:exon

position:1889085:1
position: 1889085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113569446
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113569446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1895565..1900204
location: region:1895565-1900204:1
so has part: feature:1895565-1900204:1:exon

113569446
type: Gene
SIO_000068: ncbigene

position:1895565:1
position: 1895565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900204:1
position: 1900204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895565-1900204:1:exon

LOC113569446
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569446
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569446
subclass of: SO_0000673
so part of: LOC113569446
location: 1895565..1895685
location: region:1895565-1895685:1
so has part: feature:1895565-1895685:1:exon

position:1895685:1
position: 1895685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895565-1895685:1:exon

LOC113569446
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569446
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569446
subclass of: SO_0000673
so part of: LOC113569446
location: 1897448..1897584
location: region:1897448-1897584:1
so has part: feature:1897448-1897584:1:exon

position:1897448:1
position: 1897448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1897584:1
position: 1897584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897448-1897584:1:exon

LOC113569446
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC113569446
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113569446
subclass of: SO_0000673
so part of: LOC113569446
location: 1898368..1900204
location: region:1898368-1900204:1
so has part: feature:1898368-1900204:1:exon

position:1898368:1
position: 1898368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898368-1900204:1:exon

LOC113568977
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1916539..>1930052
location: region:1916539-1930052:1
so has part: feature:1916539-1930052:1:exon
subclass of: SO_0000010

113568977
type: Gene
SIO_000068: ncbigene

position:1916539:1
position: 1916539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1930052:1
position: 1930052
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1916539-1930052:1:exon

LOC113568977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113568977
product: NACHT, LRR and PYD domains-containing protein 12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521406.1
SIO_010081: LOC113568977
subclass of: SO_0000673
so part of: LOC113568977
location: join(1916539..1916656,1917164..1917232,1919370..1921158,1924026..1924202,1924604..1924780,1926277..1926453,1926945..1927121,1927922..1928098,1929992..>1930052)
location: region:1916539-1930052:1
so has part: feature:1916539-1916656:1:exon
so has part: feature:1917164-1917232:1:exon
so has part: feature:1919370-1921158:1:exon
so has part: feature:1924026-1924202:1:exon
so has part: feature:1924604-1924780:1:exon
so has part: feature:1926277-1926453:1:exon
so has part: feature:1926945-1927121:1:exon
so has part: feature:1927922-1928098:1:exon
so has part: feature:1929992-1930052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1916539-1916656:1:exon

position:1916656:1
position: 1916656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1917164-1917232:1:exon

position:1917164:1
position: 1917164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917232:1
position: 1917232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1919370-1921158:1:exon

position:1919370:1
position: 1919370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1921158:1
position: 1921158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1924026-1924202:1:exon

position:1924026:1
position: 1924026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1924202:1
position: 1924202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1924604-1924780:1:exon

position:1924604:1
position: 1924604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1924780:1
position: 1924780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1926277-1926453:1:exon

position:1926277:1
position: 1926277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926453:1
position: 1926453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1926945-1927121:1:exon

position:1926945:1
position: 1926945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1927121:1
position: 1927121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1927922-1928098:1:exon

position:1927922:1
position: 1927922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928098:1
position: 1928098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1929992-1930052:1:exon

position:1929992:1
position: 1929992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113568977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113568977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 12-like
translation: MEASSPVQTNTAQTGGNVCAPVLHGNQIQGPVMLNITYGAQEVPSSSKVQTGGSSSTSALSEEIVHEKSKLHKSKLEKKYKKLNEGISHHGGSVLLNEIYTELYITEGGSGEVNNEHEVRQIETASRRRGIQETPIKCNELFKDKPIRSVLTKGVAGIGKTVSVQKFILDWAEGRANQDVIFIFSLPFREMNLKKEKKFSLMDLLHDFFPETKQLHLIDCDAYKVIFIFDGLDECRPPLDFHNHVSLSDVTESTSVDVLLTNLIKGNLLPSALLWITSRPAAISQIPPECVDQVTEVRGFSDPQKEEYFRKRISDQSLANRIITHMKSSRSLYIMCHIPVFCWIVATVLETMLCEAESGEIPKTLTEMFIKFLIFQIKHNDRKYHGKADTDFFQTRNIILALGKLAFQQLEKCNLIFCEEDLRECDIDVKEVSVYSGVCTQIFREESGLHLGKMFSFVHLSVQEFLAALYAFLSIISNNTNVLEEQSTAVLHEFKRSTMSDFLMNAVDKALQSENGHLDLFLRFLLGLSLESNQTLLQAQTLCLLTQTESNSHSKEETVKYIKKKISDSPSTEKSINLFHCLNELKDHSLMQEVQTYLKRGDYCRLDGVRLSPAQWSALVFVLLNSEEELDEFDLSKYDPSEECLLRLLPVVTASRKAHLSRCSITDEGCAALASALRSNPSSYLRELNLNHNKPGDSGVKQLSALLEDPHCKLEILELDKCSITEEGCAALASALRSNPSSHLRELNLDYNKPGDSGVKQLSALLEHPHCKLEKLDLSDCSITDEGCAALASALRSNPSSHLRELNLDYNKPGDSGVKQFSALLEDPHCKLEILDLSWCSITDEGCAALASALRSNPSSHLRKLNLDHNKPGDSGVKQLSALLEEPHCKLEKLHLSDCSITEEGCAALASALRSNPSSHLRELNLNYNKPGDSGVKQLSALLEDPHCNLEKLHLSWCSITDEGCAALASALRS
SIO_010081: LOC113568977
subclass of: SO_0000673
so part of: LOC113568977
location: join(1916539..1916656,1917164..1917232,1919370..1921158,1924026..1924202,1924604..1924780,1926277..1926453,1926945..1927121,1927922..1928098,1929992..>1930052)
location: region:1916539-1930052:1
so has part: feature:1916539-1916656:1:exon
so has part: feature:1917164-1917232:1:exon
so has part: feature:1919370-1921158:1:exon
so has part: feature:1924026-1924202:1:exon
so has part: feature:1924604-1924780:1:exon
so has part: feature:1926277-1926453:1:exon
so has part: feature:1926945-1927121:1:exon
so has part: feature:1927922-1928098:1:exon
so has part: feature:1929992-1930052:1:exon

XP_035377299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1916539-1916656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1917164-1917232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1919370-1921158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1924026-1924202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1924604-1924780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1926277-1926453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1926945-1927121:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1927922-1928098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1929992-1930052:1:exon

LOC118240585
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1966256..1966963)
location: region:1966256-1966963:-1
so has part: feature:1966256-1966963:-1:exon
subclass of: SO_0000011

118240585
type: Gene
SIO_000068: ncbigene

position:1966256:-1
position: 1966256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966963:-1
position: 1966963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1966256-1966963:-1:exon

LOC118240585
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: lncRNA
gene: LOC118240585
product: uncharacterized LOC118240585
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004775498.1
SIO_010081: LOC118240585
subclass of: SO_0000673
so part of: LOC118240585
location: complement(join(1966256..1966559,1966680..1966709,1966836..1966963))
location: region:1966256-1966963:-1
so has part: feature:1966836-1966963:-1:exon
so has part: feature:1966680-1966709:-1:exon
so has part: feature:1966256-1966559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1966836-1966963:-1:exon

position:1966836:-1
position: 1966836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1966680-1966709:-1:exon

position:1966680:-1
position: 1966680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966709:-1
position: 1966709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1966256-1966559:-1:exon

position:1966559:-1
position: 1966559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113590052
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113590052
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1977540..1977646
location: region:1977540-1977646:1
so has part: feature:1977540-1977646:1:exon
subclass of: SO_0000623

113590052
type: Gene
SIO_000068: ncbigene

position:1977540:1
position: 1977540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1977646:1
position: 1977646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977540-1977646:1:exon

LOC113590052
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: snRNA
gene: LOC113590052
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003412064.1
SIO_010081: LOC113590052
subclass of: SO_0000673
so part of: LOC113590052
location: 1977540..1977646
location: region:1977540-1977646:1
so has part: feature:1977540-1977646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1977540-1977646:1:exon

LOC113569043
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113569043
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1985446..1985552
location: region:1985446-1985552:1
so has part: feature:1985446-1985552:1:exon
subclass of: SO_0000623

113569043
type: Gene
SIO_000068: ncbigene

position:1985446:1
position: 1985446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985552:1
position: 1985552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985446-1985552:1:exon

LOC113569043
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8005
nc RNA class: snRNA
gene: LOC113569043
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003409686.1
SIO_010081: LOC113569043
subclass of: SO_0000673
so part of: LOC113569043
location: 1985446..1985552
location: region:1985446-1985552:1
so has part: feature:1985446-1985552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1985446-1985552:1:exon

nup188
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: nup188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1987492..2009398)
location: region:1987492-2009398:-1
so has part: feature:1987492-2009398:-1:exon
subclass of: SO_0000010

113590044
type: Gene
SIO_000068: ncbigene

position:1987492:-1
position: 1987492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009398:-1
position: 2009398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1987492-2009398:-1:exon

nup188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nup188
product: nucleoporin 188, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027029998.2
SIO_010081: nup188
subclass of: SO_0000673
so part of: nup188
location: complement(join(1987492..1989544,1989692..1989821,1989913..1989965,1990214..1990345,1993920..1994129,1994280..1994354,1994529..1994666,1994754..1994906,1995039..1995131,1995222..1995422,1995773..1995945,1996356..1996501,1996684..1996769,1996857..1996934,1997383..1997575,1997727..1997794,1998121..1998190,1998305..1998474,1998823..1999029,1999261..1999367,1999617..1999750,1999978..2000103,2000526..2000592,2000773..2000893,2000986..2001100,2001894..2001970,2002075..2002162,2002372..2002498,2002650..2002805,2002954..2003080,2003376..2003495,2003651..2003716,2003942..2004031,2004700..2004900,2005773..2005887,2006138..2006349,2006483..2006602,2006707..2006799,2007197..2007322,2007696..2007780,2008303..2008376,2008606..2008660,2009353..2009398))
location: region:1987492-2009398:-1
so has part: feature:2009353-2009398:-1:exon
so has part: feature:2008606-2008660:-1:exon
so has part: feature:2008303-2008376:-1:exon
so has part: feature:2007696-2007780:-1:exon
so has part: feature:2007197-2007322:-1:exon
so has part: feature:2006707-2006799:-1:exon
so has part: feature:2006483-2006602:-1:exon
so has part: feature:2006138-2006349:-1:exon
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urn:…
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SIO_000628: feature:2009353-2009398:-1:exon

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urn:…
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urn:…
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urn:…
SIO_000300: 4
SIO_000628: feature:2007696-2007780:-1:exon

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urn:…
SIO_000300: 5
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:2004700-2004900:-1:exon

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urn:…
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urn:…
SIO_000300: 12
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urn:…
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:2002650-2002805:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:2002372-2002498:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:2002075-2002162:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:2001894-2001970:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:2000986-2001100:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:2000773-2000893:-1:exon

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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:1999978-2000103:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:1999617-1999750:-1:exon

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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:1998305-1998474:-1:exon

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urn:…
SIO_000300: 27
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SIO_000300: 28
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SIO_000300: 29
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urn:…
SIO_000300: 30
SIO_000628: feature:1996857-1996934:-1:exon

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urn:…
SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 33
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SIO_000300: 34
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SIO_000300: 35
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SIO_000300: 37
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SIO_000628: feature:1994280-1994354:-1:exon

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SIO_000300: 39
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SIO_000300: 40
SIO_000628: feature:1990214-1990345:-1:exon

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SIO_000300: 41
SIO_000628: feature:1989913-1989965:-1:exon

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SIO_000300: 42
SIO_000628: feature:1989692-1989821:-1:exon

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SIO_000300: 43
SIO_000628: feature:1987492-1989544:-1:exon

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nup188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: nup188
product: nucleoporin 188, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027029997.2
SIO_010081: nup188
subclass of: SO_0000673
so part of: nup188
location: complement(join(1987492..1989544,1989692..1989821,1989913..1989965,1990214..1990345,1993920..1994129,1994280..1994354,1994529..1994666,1994754..1994906,1995039..1995131,1995222..1995422,1995773..1995945,1996356..1996501,1996684..1996769,1996857..1996934,1997383..1997578,1997727..1997794,1998121..1998190,1998305..1998474,1998823..1999029,1999261..1999367,1999617..1999750,1999978..2000103,2000526..2000592,2000773..2000893,2000986..2001100,2001894..2001970,2002075..2002162,2002372..2002498,2002650..2002805,2002954..2003080,2003376..2003495,2003651..2003716,2003942..2004031,2004700..2004900,2005773..2005887,2006138..2006349,2006483..2006602,2006707..2006799,2007197..2007322,2007696..2007780,2008303..2008376,2008606..2008660,2009353..2009398))
location: region:1987492-2009398:-1
so has part: feature:2009353-2009398:-1:exon
so has part: feature:2008606-2008660:-1:exon
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so has part: feature:2002954-2003080:-1:exon
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so has part: feature:1999617-1999750:-1:exon
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so has part: feature:1998823-1999029:-1:exon
so has part: feature:1998305-1998474:-1:exon
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so has part: feature:1997727-1997794:-1:exon
so has part: feature:1997383-1997578:-1:exon
so has part: feature:1996857-1996934:-1:exon
so has part: feature:1996684-1996769:-1:exon
so has part: feature:1996356-1996501:-1:exon
so has part: feature:1995773-1995945:-1:exon
so has part: feature:1995222-1995422:-1:exon
so has part: feature:1995039-1995131:-1:exon
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so has part: feature:1993920-1994129:-1:exon
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so has part: feature:1989913-1989965:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2009353-2009398:-1:exon

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SIO_000300: 5
SIO_000628: feature:2007197-2007322:-1:exon

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SIO_000300: 6
SIO_000628: feature:2006707-2006799:-1:exon

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SIO_000300: 7
SIO_000628: feature:2006483-2006602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2006138-2006349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2005773-2005887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2004700-2004900:-1:exon

urn:…
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SIO_000628: feature:2003942-2004031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2003651-2003716:-1:exon

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SIO_000300: 13
SIO_000628: feature:2003376-2003495:-1:exon

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SIO_000300: 14
SIO_000628: feature:2002954-2003080:-1:exon

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SIO_000300: 15
SIO_000628: feature:2002650-2002805:-1:exon

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SIO_000300: 16
SIO_000628: feature:2002372-2002498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2002075-2002162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001894-2001970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2000986-2001100:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2000773-2000893:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2000526-2000592:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1999978-2000103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1999617-1999750:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1999261-1999367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1998823-1999029:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1998305-1998474:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1998121-1998190:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1997727-1997794:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1997383-1997578:-1:exon

position:1997578:-1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:1996857-1996934:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1996684-1996769:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1996356-1996501:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1995773-1995945:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1995222-1995422:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1995039-1995131:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1994754-1994906:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1994529-1994666:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1994280-1994354:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1993920-1994129:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1990214-1990345:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1989913-1989965:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1989692-1989821:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1987492-1989544:-1:exon

nup188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nup188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin NUP188 homolog isoform X2
translation: MAESGMCVRSSRELWTILLGRSALREPDQIEAELERNGGRLLQGLSYYNTPSLSSAERLKADKDVAQPLKDFGLRISKLLGLDEQQSVQILQCYLQEDYRGTRNTLKTVLQDERQSQALLLKIADYYYEERVCLLRCVLLLLTYFQDERHPYRAEYAGCVAKLEKDLVSNYQQQFEGLFNAEAPTWETHGNLMTERQVSHWFTQCLREQALLLEVLFLYYAYFEMPPSDLLTFARLFKEQGFGQRQTNRHLVDKSMDALVDRIGYFSCLILVEGMDIDFLHKCALEDRTEQHQLSSTQEINKEMDQMLLAFGDICHHGPVLLAWVLLRHTLQPVEAAAVVRRLGHTTLQLGVFQYLTDMLQALGNTANNCTASTARMCIYGLLSFVVTSFEEDTLGSQQYLISAACEVLAAPSLAELFWESKPNVGLEMVLDSAVGVFPHKTGPLLQLLTALLADKSTAKRVYMFLDKMSVYTEVYKHKPSDVLSREDETLWHRKTPKLLYPLGAGQTNLRMSQGCYGQVCVGQEGYVVRWDYSYSSWTLFTCEVEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYMLLQRLTSVINPPVDVIASCVNCLIVLAARQPGKVWSSLQHTGFLPFGSTPLTNMAQIMSAEGMKAGNYGNLLVLIEQPRGEYAVTIAFLRLVTTLVKGQVGSTQSRGLIPCVLLVLKEMLPTYHKWRYNRHGVREKIGCLILELVHAILNLSPEGESHGSTPSLQSLCIYSLANTEAGQAVVSIMGVGVDTISMVLSVQPWSGSNDGPGQVLIQMVKLAFSVTNNVIRLKPQSDTISPLEQALTQHGGHGNNLIAVLAKYIYHKHDPALPRLAVQLLKRLAMVAPMSVYACLGSDAAPIRDAFLTRLQSKTVDLRIKVTILEFLTVAVETQPGLIELFLNLETKDGNDGAKEFSLGEWSCLAVVLELLDSELQGQYWCPPLLQRAALAFIHALWQDRRDSALSVLRTKEKFWDNLSAPLFSTLPSPAENTEPCVLESCAFVMKIIGLEIYYVVSKLEDSLKAALKRLSSQRRYEFWSQYVKELVCAACEGEEEGVRSLPESQMLISAWRTLLILSTSHSDVMHLKEDSVRQKLFMDILEGTKTTLSTPQSVACLRLGSMLATLLLILLKQWKSVLVFAPALLPVLSLMLDSVLQADQQLMERTKAKLFSALISALHIQGLNGGDITQLPQLLLCVCETVQDEALALIDSTRHTTQRNDSQEDSMETDVPRSVQKDQRDSVCVLALHLSKELCGLDEAGEQWLQVMRKLPVLPSVLSALELSLRSTHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQSVCLPLLSVYEGPANGAPQAFSRKPLDAPCWSGVYRLCLSLMESLLKTLRYNFISEALDFVGVHQERILQCLSAVRTVQSLACLDEADHTVGFLLQLSSFCREWQFHLPQLLRDVQVNLCYLCQTCTYLLHSKKMLHHYLQAKNGEALPQGPRPQRVVPHTSKEQPLVGEREEAESKALQAVQCSLLKILSKTLATLQHFTPDCCQILLDQSMDLAEYRTLFVLSFTTPAFDSDVAPSFGTLLATINVALSMLGEIEKKKELVVSSEETQALKSLLMFSMENCFYVLISQAMRCLKDPAVLPRDKQRVKQELSSELSTLLSSLSRFFRRGSPSSPAGGLLPSPQTKPTPLGSKLTQEGQEPFIQLVQAFVRHVQR
SIO_010081: nup188
subclass of: SO_0000673
so part of: nup188
location: complement(join(1989365..1989544,1989692..1989821,1989913..1989965,1990214..1990345,1993920..1994129,1994280..1994354,1994529..1994666,1994754..1994906,1995039..1995131,1995222..1995422,1995773..1995945,1996356..1996501,1996684..1996769,1996857..1996934,1997383..1997575,1997727..1997794,1998121..1998190,1998305..1998474,1998823..1999029,1999261..1999367,1999617..1999750,1999978..2000103,2000526..2000592,2000773..2000893,2000986..2001100,2001894..2001970,2002075..2002162,2002372..2002498,2002650..2002805,2002954..2003080,2003376..2003495,2003651..2003716,2003942..2004031,2004700..2004900,2005773..2005887,2006138..2006349,2006483..2006602,2006707..2006799,2007197..2007322,2007696..2007780,2008303..2008376,2008606..2008660,2009353..2009378))
location: region:1989365-2009378:-1
so has part: feature:2009353-2009378:-1:exon
so has part: feature:2008606-2008660:-1:exon
so has part: feature:2008303-2008376:-1:exon
so has part: feature:2007696-2007780:-1:exon
so has part: feature:2007197-2007322:-1:exon
so has part: feature:2006707-2006799:-1:exon
so has part: feature:2006483-2006602:-1:exon
so has part: feature:2006138-2006349:-1:exon
so has part: feature:2005773-2005887:-1:exon
so has part: feature:2004700-2004900:-1:exon
so has part: feature:2003942-2004031:-1:exon
so has part: feature:2003651-2003716:-1:exon
so has part: feature:2003376-2003495:-1:exon
so has part: feature:2002954-2003080:-1:exon
so has part: feature:2002650-2002805:-1:exon
so has part: feature:2002372-2002498:-1:exon
so has part: feature:2002075-2002162:-1:exon
so has part: feature:2001894-2001970:-1:exon
so has part: feature:2000986-2001100:-1:exon
so has part: feature:2000773-2000893:-1:exon
so has part: feature:2000526-2000592:-1:exon
so has part: feature:1999978-2000103:-1:exon
so has part: feature:1999617-1999750:-1:exon
so has part: feature:1999261-1999367:-1:exon
so has part: feature:1998823-1999029:-1:exon
so has part: feature:1998305-1998474:-1:exon
so has part: feature:1998121-1998190:-1:exon
so has part: feature:1997727-1997794:-1:exon
so has part: feature:1997383-1997575:-1:exon
so has part: feature:1996857-1996934:-1:exon
so has part: feature:1996684-1996769:-1:exon
so has part: feature:1996356-1996501:-1:exon
so has part: feature:1995773-1995945:-1:exon
so has part: feature:1995222-1995422:-1:exon
so has part: feature:1995039-1995131:-1:exon
so has part: feature:1994754-1994906:-1:exon
so has part: feature:1994529-1994666:-1:exon
so has part: feature:1994280-1994354:-1:exon
so has part: feature:1993920-1994129:-1:exon
so has part: feature:1990214-1990345:-1:exon
so has part: feature:1989913-1989965:-1:exon
so has part: feature:1989692-1989821:-1:exon
so has part: feature:1989365-1989544:-1:exon

XP_026885799.1
type: Protein
SIO_000068: ncbiprotein

position:1989365:-1
position: 1989365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009378:-1
position: 2009378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2009353-2009378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2008606-2008660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2008303-2008376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2007696-2007780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2007197-2007322:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2006707-2006799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2006483-2006602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2006138-2006349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2005773-2005887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2004700-2004900:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2003942-2004031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2003651-2003716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2003376-2003495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2002954-2003080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2002650-2002805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2002372-2002498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2002075-2002162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001894-2001970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2000986-2001100:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2000773-2000893:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2000526-2000592:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1999978-2000103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1999617-1999750:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1999261-1999367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1998823-1999029:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1998305-1998474:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1998121-1998190:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1997727-1997794:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1997383-1997575:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1996857-1996934:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1996684-1996769:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1996356-1996501:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1995773-1995945:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1995222-1995422:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1995039-1995131:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1994754-1994906:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1994529-1994666:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1994280-1994354:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1993920-1994129:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1990214-1990345:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1989913-1989965:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1989692-1989821:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1989365-1989544:-1:exon

nup188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: nup188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin NUP188 homolog isoform X1
translation: MAESGMCVRSSRELWTILLGRSALREPDQIEAELERNGGRLLQGLSYYNTPSLSSAERLKADKDVAQPLKDFGLRISKLLGLDEQQSVQILQCYLQEDYRGTRNTLKTVLQDERQSQALLLKIADYYYEERVCLLRCVLLLLTYFQDERHPYRAEYAGCVAKLEKDLVSNYQQQFEGLFNAEAPTWETHGNLMTERQVSHWFTQCLREQALLLEVLFLYYAYFEMPPSDLLTFARLFKEQGFGQRQTNRHLVDKSMDALVDRIGYFSCLILVEGMDIDFLHKCALEDRTEQHQLSSTQEINKEMDQMLLAFGDICHHGPVLLAWVLLRHTLQPVEAAAVVRRLGHTTLQLGVFQYLTDMLQALGNTANNCTASTARMCIYGLLSFVVTSFEEDTLGSQQYLISAACEVLAAPSLAELFWESKPNVGLEMVLDSAVGVFPHKTGPLLQLLTALLADKSTAKRVYMFLDKMSVYTEVYKHKPSDVLSREDETLWHRKTPKLLYPLGAGQTNLRMSQGCYGQVCVGQEGYVVRWDYSYSSWTLFTCEVEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYMLLQRLTSVINPPVDVIASCVNCLIVLAARQPGKVWSSLQHTGFLPFGSTPLTNMAQIMSAEGMKAGNYGNLLVLIEQPRGEYAVTIAFLRLVTTLVKGQVGSTQSRGLIPCVLLVLKEMLPTYHKWRYNRHGVREKIGCLILELVHAILNLSPEGESHGSTPSLQSLCIYSLANTEAGQAVVSIMGVGVDTISMVLSVQPWSGSNDGPGQVLIQMVKLAFSVTNNVIRLKPQSDTISPLEQALTQHGGHGNNLIAVLAKYIYHKHDPALPRLAVQLLKRLAMVAPMSVYACLGSDAAPIRDAFLTRLQSKTVDLRIKVTILEFLTVAVETQPGLIELFLNLETKDGNDGAKEFSLGEWSCLAVVLELLDSELQGQYWCPPLLQRAALAFIHALWQDRRDSALSVLRTKEKFWDNLSAPLFSTLPSPAENTEPCVLESCAFVMKIIGLEIYYVVSSKLEDSLKAALKRLSSQRRYEFWSQYVKELVCAACEGEEEGVRSLPESQMLISAWRTLLILSTSHSDVMHLKEDSVRQKLFMDILEGTKTTLSTPQSVACLRLGSMLATLLLILLKQWKSVLVFAPALLPVLSLMLDSVLQADQQLMERTKAKLFSALISALHIQGLNGGDITQLPQLLLCVCETVQDEALALIDSTRHTTQRNDSQEDSMETDVPRSVQKDQRDSVCVLALHLSKELCGLDEAGEQWLQVMRKLPVLPSVLSALELSLRSTHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQSVCLPLLSVYEGPANGAPQAFSRKPLDAPCWSGVYRLCLSLMESLLKTLRYNFISEALDFVGVHQERILQCLSAVRTVQSLACLDEADHTVGFLLQLSSFCREWQFHLPQLLRDVQVNLCYLCQTCTYLLHSKKMLHHYLQAKNGEALPQGPRPQRVVPHTSKEQPLVGEREEAESKALQAVQCSLLKILSKTLATLQHFTPDCCQILLDQSMDLAEYRTLFVLSFTTPAFDSDVAPSFGTLLATINVALSMLGEIEKKKELVVSSEETQALKSLLMFSMENCFYVLISQAMRCLKDPAVLPRDKQRVKQELSSELSTLLSSLSRFFRRGSPSSPAGGLLPSPQTKPTPLGSKLTQEGQEPFIQLVQAFVRHVQR
SIO_010081: nup188
subclass of: SO_0000673
so part of: nup188
location: complement(join(1989365..1989544,1989692..1989821,1989913..1989965,1990214..1990345,1993920..1994129,1994280..1994354,1994529..1994666,1994754..1994906,1995039..1995131,1995222..1995422,1995773..1995945,1996356..1996501,1996684..1996769,1996857..1996934,1997383..1997578,1997727..1997794,1998121..1998190,1998305..1998474,1998823..1999029,1999261..1999367,1999617..1999750,1999978..2000103,2000526..2000592,2000773..2000893,2000986..2001100,2001894..2001970,2002075..2002162,2002372..2002498,2002650..2002805,2002954..2003080,2003376..2003495,2003651..2003716,2003942..2004031,2004700..2004900,2005773..2005887,2006138..2006349,2006483..2006602,2006707..2006799,2007197..2007322,2007696..2007780,2008303..2008376,2008606..2008660,2009353..2009378))
location: region:1989365-2009378:-1
so has part: feature:2009353-2009378:-1:exon
so has part: feature:2008606-2008660:-1:exon
so has part: feature:2008303-2008376:-1:exon
so has part: feature:2007696-2007780:-1:exon
so has part: feature:2007197-2007322:-1:exon
so has part: feature:2006707-2006799:-1:exon
so has part: feature:2006483-2006602:-1:exon
so has part: feature:2006138-2006349:-1:exon
so has part: feature:2005773-2005887:-1:exon
so has part: feature:2004700-2004900:-1:exon
so has part: feature:2003942-2004031:-1:exon
so has part: feature:2003651-2003716:-1:exon
so has part: feature:2003376-2003495:-1:exon
so has part: feature:2002954-2003080:-1:exon
so has part: feature:2002650-2002805:-1:exon
so has part: feature:2002372-2002498:-1:exon
so has part: feature:2002075-2002162:-1:exon
so has part: feature:2001894-2001970:-1:exon
so has part: feature:2000986-2001100:-1:exon
so has part: feature:2000773-2000893:-1:exon
so has part: feature:2000526-2000592:-1:exon
so has part: feature:1999978-2000103:-1:exon
so has part: feature:1999617-1999750:-1:exon
so has part: feature:1999261-1999367:-1:exon
so has part: feature:1998823-1999029:-1:exon
so has part: feature:1998305-1998474:-1:exon
so has part: feature:1998121-1998190:-1:exon
so has part: feature:1997727-1997794:-1:exon
so has part: feature:1997383-1997578:-1:exon
so has part: feature:1996857-1996934:-1:exon
so has part: feature:1996684-1996769:-1:exon
so has part: feature:1996356-1996501:-1:exon
so has part: feature:1995773-1995945:-1:exon
so has part: feature:1995222-1995422:-1:exon
so has part: feature:1995039-1995131:-1:exon
so has part: feature:1994754-1994906:-1:exon
so has part: feature:1994529-1994666:-1:exon
so has part: feature:1994280-1994354:-1:exon
so has part: feature:1993920-1994129:-1:exon
so has part: feature:1990214-1990345:-1:exon
so has part: feature:1989913-1989965:-1:exon
so has part: feature:1989692-1989821:-1:exon
so has part: feature:1989365-1989544:-1:exon

XP_026885798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2009353-2009378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2008606-2008660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2008303-2008376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2007696-2007780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2007197-2007322:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2006707-2006799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2006483-2006602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2006138-2006349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2005773-2005887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2004700-2004900:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2003942-2004031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2003651-2003716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2003376-2003495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2002954-2003080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2002650-2002805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2002372-2002498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2002075-2002162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001894-2001970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2000986-2001100:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2000773-2000893:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2000526-2000592:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1999978-2000103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1999617-1999750:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1999261-1999367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1998823-1999029:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1998305-1998474:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1998121-1998190:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1997727-1997794:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1997383-1997578:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1996857-1996934:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1996684-1996769:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1996356-1996501:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1995773-1995945:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1995222-1995422:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1995039-1995131:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1994754-1994906:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1994529-1994666:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1994280-1994354:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1993920-1994129:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1990214-1990345:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1989913-1989965:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1989692-1989821:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1989365-1989544:-1:exon

dolk
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: dolk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2009611..2014441
location: region:2009611-2014441:1
so has part: feature:2009611-2014441:1:exon
subclass of: SO_0000010

113590035
type: Gene
SIO_000068: ncbigene

position:2009611:1
position: 2009611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014441:1
position: 2014441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2009611-2014441:1:exon

dolk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: dolk
product: dolichol kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_035521430.1
SIO_010081: dolk
subclass of: SO_0000673
so part of: dolk
location: join(2009611..2009808,2011369..2014441)
location: region:2009611-2014441:1
so has part: feature:2009611-2009808:1:exon
so has part: feature:2011369-2014441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2009611-2009808:1:exon

position:2009808:1
position: 2009808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2011369-2014441:1:exon

position:2011369:1
position: 2011369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dolk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: dolk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichol kinase
translation: MQTDPVLVESLVVFSIVLCVHVAIWNQLSWSCIALAIQAFYVQHKWDRLLRAGAAVFHFRPSANSGVLPASMLLPLLGLALQGRCVAAGNVHFERFAMVVTVTGMMLALFLSLIALGVTRPVPTNTCVVAGIAAGAIFYAVKHTLTVSEVIEVLEVLLIFVYLNLILLYLLPRCFTPGEALLILGGISFIINQLIKRSLGSGPAGADAEPLLFLLPVAVVGCVLLGVVFALLFLFMESDSWAASAFFHTMTAVLGLGLLLPWLSLLGQQHPVAWLLLFLTQSPARLWMLAYWGVLALAAVAVVMRQNGRRAASGKKHRASSAARKYFHLLVVLTFGPGLALDRPLLHLAAVACLAVFLFLELVRVFRIRPLGAPLRHWLAVFLDERDSGPLVLTHIYLLLGVSLPVWLSPGPCTPRGGLPGAGGLVPYAGVLAVGVGDTVASVFGSTVGEIRWPGTKKTFEGTATSVFAQVIAVAIFLIADSSINLNASYSWVVGSIAMVAMLEAYTSQIDNLLLPLYLYVLLLL
SIO_010081: dolk
subclass of: SO_0000673
so part of: dolk
location: 2011551..2013128
location: region:2011551-2013128:1
so has part: feature:2011551-2013128:1:exon

XP_035377323.1
type: Protein
SIO_000068: ncbiprotein

position:2011551:1
position: 2011551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2013128:1
position: 2013128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2011551-2013128:1:exon

LOC113590048
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113590048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2022008..2029335)
location: region:2022008-2029335:-1
so has part: feature:2022008-2029335:-1:exon
subclass of: SO_0000010

113590048
type: Gene
SIO_000068: ncbigene

position:2022008:-1
position: 2022008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2029335:-1
position: 2029335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022008-2029335:-1:exon

LOC113590048
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113590048
product: P2X purinoceptor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027030005.2
SIO_010081: LOC113590048
subclass of: SO_0000673
so part of: LOC113590048
location: complement(join(2022008..2022394,2023129..2023186,2023915..2024010,2024280..2024345,2024554..2024644,2024775..2024911,2025203..2025344,2025430..2025510,2025634..2025730,2025849..2025921,2026318..2026389,2027386..2027533,2028975..2029334))
location: region:2022008-2029334:-1
so has part: feature:2028975-2029334:-1:exon
so has part: feature:2027386-2027533:-1:exon
so has part: feature:2026318-2026389:-1:exon
so has part: feature:2025849-2025921:-1:exon
so has part: feature:2025634-2025730:-1:exon
so has part: feature:2025430-2025510:-1:exon
so has part: feature:2025203-2025344:-1:exon
so has part: feature:2024775-2024911:-1:exon
so has part: feature:2024554-2024644:-1:exon
so has part: feature:2024280-2024345:-1:exon
so has part: feature:2023915-2024010:-1:exon
so has part: feature:2023129-2023186:-1:exon
so has part: feature:2022008-2022394:-1:exon

position:2029334:-1
position: 2029334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028975-2029334:-1:exon

position:2028975:-1
position: 2028975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2027386-2027533:-1:exon

position:2027386:-1
position: 2027386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2027533:-1
position: 2027533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2026318-2026389:-1:exon

position:2026318:-1
position: 2026318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2026389:-1
position: 2026389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2025849-2025921:-1:exon

position:2025849:-1
position: 2025849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025921:-1
position: 2025921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2025634-2025730:-1:exon

position:2025634:-1
position: 2025634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025730:-1
position: 2025730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2025430-2025510:-1:exon

position:2025430:-1
position: 2025430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025510:-1
position: 2025510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2025203-2025344:-1:exon

position:2025203:-1
position: 2025203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025344:-1
position: 2025344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2024775-2024911:-1:exon

position:2024775:-1
position: 2024775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2024911:-1
position: 2024911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2024554-2024644:-1:exon

position:2024554:-1
position: 2024554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2024644:-1
position: 2024644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2024280-2024345:-1:exon

position:2024280:-1
position: 2024280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2024345:-1
position: 2024345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2023915-2024010:-1:exon

position:2023915:-1
position: 2023915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2024010:-1
position: 2024010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2023129-2023186:-1:exon

position:2023129:-1
position: 2023129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023186:-1
position: 2023186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2022008-2022394:-1:exon

position:2022394:-1
position: 2022394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113590048
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113590048
product: P2X purinoceptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027030004.2
SIO_010081: LOC113590048
subclass of: SO_0000673
so part of: LOC113590048
location: complement(join(2022008..2022994,2023129..2023186,2023915..2024010,2024280..2024345,2024554..2024644,2024775..2024911,2025203..2025344,2025430..2025510,2025634..2025730,2025849..2025921,2026318..2026389,2027386..2027533,2028975..2029334))
location: region:2022008-2029334:-1
so has part: feature:2028975-2029334:-1:exon
so has part: feature:2027386-2027533:-1:exon
so has part: feature:2026318-2026389:-1:exon
so has part: feature:2025849-2025921:-1:exon
so has part: feature:2025634-2025730:-1:exon
so has part: feature:2025430-2025510:-1:exon
so has part: feature:2025203-2025344:-1:exon
so has part: feature:2024775-2024911:-1:exon
so has part: feature:2024554-2024644:-1:exon
so has part: feature:2024280-2024345:-1:exon
so has part: feature:2023915-2024010:-1:exon
so has part: feature:2023129-2023186:-1:exon
so has part: feature:2022008-2022994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2028975-2029334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2027386-2027533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2026318-2026389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2025849-2025921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2025634-2025730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2025430-2025510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2025203-2025344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2024775-2024911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2024554-2024644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2024280-2024345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2023915-2024010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2023129-2023186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2022008-2022994:-1:exon

position:2022994:-1
position: 2022994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113590048
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113590048
product: P2X purinoceptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027030003.2
SIO_010081: LOC113590048
subclass of: SO_0000673
so part of: LOC113590048
location: complement(join(2022012..2023186,2023915..2024010,2024280..2024345,2024554..2024644,2024775..2024911,2025203..2025344,2025430..2025510,2025634..2025730,2025849..2025921,2026318..2026389,2027386..2027533,2028975..2029335))
location: region:2022012-2029335:-1
so has part: feature:2028975-2029335:-1:exon
so has part: feature:2027386-2027533:-1:exon
so has part: feature:2026318-2026389:-1:exon
so has part: feature:2025849-2025921:-1:exon
so has part: feature:2025634-2025730:-1:exon
so has part: feature:2025430-2025510:-1:exon
so has part: feature:2025203-2025344:-1:exon
so has part: feature:2024775-2024911:-1:exon
so has part: feature:2024554-2024644:-1:exon
so has part: feature:2024280-2024345:-1:exon
so has part: feature:2023915-2024010:-1:exon
so has part: feature:2022012-2023186:-1:exon

position:2022012:-1
position: 2022012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028975-2029335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2027386-2027533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2026318-2026389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2025849-2025921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2025634-2025730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2025430-2025510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2025203-2025344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2024775-2024911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2024554-2024644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2024280-2024345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2023915-2024010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2022012-2023186:-1:exon

LOC113590048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113590048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 4
translation: MCCGGRCCVSMTQCFFDYSTSKVLVIRSKSVGTLNRFCQAVVLAYIIGYVCVLKKGYQDTDTVISSVTTKVKGIALTNTSDLGLRIWDVADYVIPPQEENSFFVLTNLNITPNQTQTRCAENPGPGSTCTSGRDCKRGFHDSRQNGVQTGRCIQFSVTEKTCEVLAWCPLEKGNDPPDPPLLAEAMNFTVLIKNSIRYPKFNFNKRNILPHVNSSYLSQCVFNRTTDPDCPIFRLGDIASEAGEDFQTMAVHGGVMGVQILWDCNLDMPESWCMPTYTFRRLDNKDPDNNVAPGYNIRFAKYYKNGGKESRNLVKGYGIRFEIMVFGKAGKFNIVPTLLNIGAGLALLGLVNVVCDWIVLTFMRNRQQYSQEKYAYVGDFGLLSNEVTEPSGTGFVEDD
SIO_010081: LOC113590048
subclass of: SO_0000673
so part of: LOC113590048
location: complement(join(2023133..2023186,2023915..2024010,2024280..2024345,2024554..2024644,2024775..2024911,2025203..2025344,2025430..2025510,2025634..2025730,2025849..2025921,2026318..2026389,2027386..2027533,2028975..2029117))
location: region:2023133-2029117:-1
so has part: feature:2028975-2029117:-1:exon
so has part: feature:2027386-2027533:-1:exon
so has part: feature:2026318-2026389:-1:exon
so has part: feature:2025849-2025921:-1:exon
so has part: feature:2025634-2025730:-1:exon
so has part: feature:2025430-2025510:-1:exon
so has part: feature:2025203-2025344:-1:exon
so has part: feature:2024775-2024911:-1:exon
so has part: feature:2024554-2024644:-1:exon
so has part: feature:2024280-2024345:-1:exon
so has part: feature:2023915-2024010:-1:exon
so has part: feature:2023133-2023186:-1:exon

XP_026885804.2
type: Protein
SIO_000068: ncbiprotein

position:2023133:-1
position: 2023133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2029117:-1
position: 2029117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028975-2029117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2027386-2027533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2026318-2026389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2025849-2025921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2025634-2025730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2025430-2025510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2025203-2025344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2024775-2024911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2024554-2024644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2024280-2024345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2023915-2024010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2023133-2023186:-1:exon

LOC113590048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113590048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 4
translation: MCCGGRCCVSMTQCFFDYSTSKVLVIRSKSVGTLNRFCQAVVLAYIIGYVCVLKKGYQDTDTVISSVTTKVKGIALTNTSDLGLRIWDVADYVIPPQEENSFFVLTNLNITPNQTQTRCAENPGPGSTCTSGRDCKRGFHDSRQNGVQTGRCIQFSVTEKTCEVLAWCPLEKGNDPPDPPLLAEAMNFTVLIKNSIRYPKFNFNKRNILPHVNSSYLSQCVFNRTTDPDCPIFRLGDIASEAGEDFQTMAVHGGVMGVQILWDCNLDMPESWCMPTYTFRRLDNKDPDNNVAPGYNIRFAKYYKNGGKESRNLVKGYGIRFEIMVFGKAGKFNIVPTLLNIGAGLALLGLVNVVCDWIVLTFMRNRQQYSQEKYAYVGDFGLLSNEVTEPSGTGFVEDD
SIO_010081: LOC113590048
subclass of: SO_0000673
so part of: LOC113590048
location: complement(join(2023133..2023186,2023915..2024010,2024280..2024345,2024554..2024644,2024775..2024911,2025203..2025344,2025430..2025510,2025634..2025730,2025849..2025921,2026318..2026389,2027386..2027533,2028975..2029117))
location: region:2023133-2029117:-1
so has part: feature:2028975-2029117:-1:exon
so has part: feature:2027386-2027533:-1:exon
so has part: feature:2026318-2026389:-1:exon
so has part: feature:2025849-2025921:-1:exon
so has part: feature:2025634-2025730:-1:exon
so has part: feature:2025430-2025510:-1:exon
so has part: feature:2025203-2025344:-1:exon
so has part: feature:2024775-2024911:-1:exon
so has part: feature:2024554-2024644:-1:exon
so has part: feature:2024280-2024345:-1:exon
so has part: feature:2023915-2024010:-1:exon
so has part: feature:2023133-2023186:-1:exon

XP_026885805.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2028975-2029117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2027386-2027533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2026318-2026389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2025849-2025921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2025634-2025730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2025430-2025510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2025203-2025344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2024775-2024911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2024554-2024644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2024280-2024345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2023915-2024010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2023133-2023186:-1:exon

LOC113590048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113590048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 4
translation: MCCGGRCCVSMTQCFFDYSTSKVLVIRSKSVGTLNRFCQAVVLAYIIGYVCVLKKGYQDTDTVISSVTTKVKGIALTNTSDLGLRIWDVADYVIPPQEENSFFVLTNLNITPNQTQTRCAENPGPGSTCTSGRDCKRGFHDSRQNGVQTGRCIQFSVTEKTCEVLAWCPLEKGNDPPDPPLLAEAMNFTVLIKNSIRYPKFNFNKRNILPHVNSSYLSQCVFNRTTDPDCPIFRLGDIASEAGEDFQTMAVHGGVMGVQILWDCNLDMPESWCMPTYTFRRLDNKDPDNNVAPGYNIRFAKYYKNGGKESRNLVKGYGIRFEIMVFGKAGKFNIVPTLLNIGAGLALLGLVNVVCDWIVLTFMRNRQQYSQEKYAYVGDFGLLSNEVTEPSGTGFVEDD
SIO_010081: LOC113590048
subclass of: SO_0000673
so part of: LOC113590048
location: complement(join(2023133..2023186,2023915..2024010,2024280..2024345,2024554..2024644,2024775..2024911,2025203..2025344,2025430..2025510,2025634..2025730,2025849..2025921,2026318..2026389,2027386..2027533,2028975..2029117))
location: region:2023133-2029117:-1
so has part: feature:2028975-2029117:-1:exon
so has part: feature:2027386-2027533:-1:exon
so has part: feature:2026318-2026389:-1:exon
so has part: feature:2025849-2025921:-1:exon
so has part: feature:2025634-2025730:-1:exon
so has part: feature:2025430-2025510:-1:exon
so has part: feature:2025203-2025344:-1:exon
so has part: feature:2024775-2024911:-1:exon
so has part: feature:2024554-2024644:-1:exon
so has part: feature:2024280-2024345:-1:exon
so has part: feature:2023915-2024010:-1:exon
so has part: feature:2023133-2023186:-1:exon

XP_026885806.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2028975-2029117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2027386-2027533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2026318-2026389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2025849-2025921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2025634-2025730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2025430-2025510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2025203-2025344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2024775-2024911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2024554-2024644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2024280-2024345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2023915-2024010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2023133-2023186:-1:exon

gstt1b
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: gstt1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2030791..2034019)
location: region:2030791-2034019:-1
so has part: feature:2030791-2034019:-1:exon
subclass of: SO_0000010

113590051
type: Gene
SIO_000068: ncbigene

position:2030791:-1
position: 2030791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034019:-1
position: 2034019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2030791-2034019:-1:exon

gstt1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: gstt1b
product: glutathione S-transferase theta 1b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027030009.2
SIO_010081: gstt1b
subclass of: SO_0000673
so part of: gstt1b
location: complement(join(2030791..2031319,2031579..2031755,2032498..2032648,2033210..2033297,2033811..2034019))
location: region:2030791-2034019:-1
so has part: feature:2033811-2034019:-1:exon
so has part: feature:2033210-2033297:-1:exon
so has part: feature:2032498-2032648:-1:exon
so has part: feature:2031579-2031755:-1:exon
so has part: feature:2030791-2031319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2033811-2034019:-1:exon

position:2033811:-1
position: 2033811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2033210-2033297:-1:exon

position:2033210:-1
position: 2033210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033297:-1
position: 2033297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2032498-2032648:-1:exon

position:2032498:-1
position: 2032498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032648:-1
position: 2032648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2031579-2031755:-1:exon

position:2031579:-1
position: 2031579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2031755:-1
position: 2031755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2030791-2031319:-1:exon

position:2031319:-1
position: 2031319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gstt1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: gstt1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase theta-1b
translation: MGLEMYLDLFSQPCRSVYIFARKNNIPFDFKKISLLKGEQYGKDFGQINVLRKVPAIRDGDFCLAESIAIMMYLAEKYHTPDHWYPAELQKRARVNEYLSWQHNVMRTYGSKVFWLKFMIPKIMKIEVPKEKMDAALEDLDGSLKLLEEKFLQDRPFIAGNKISLADLVAIVEVMQPVGAGLDVFEGRPKLRAWKERVRAAIGAELFDEAHQGILEIADIGQHVDASQLEIFKPKVLRLFL
SIO_010081: gstt1b
subclass of: SO_0000673
so part of: gstt1b
location: complement(join(2031122..2031319,2031579..2031755,2032498..2032648,2033210..2033297,2033811..2033922))
location: region:2031122-2033922:-1
so has part: feature:2033811-2033922:-1:exon
so has part: feature:2033210-2033297:-1:exon
so has part: feature:2032498-2032648:-1:exon
so has part: feature:2031579-2031755:-1:exon
so has part: feature:2031122-2031319:-1:exon

XP_026885810.2
type: Protein
SIO_000068: ncbiprotein

position:2031122:-1
position: 2031122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033922:-1
position: 2033922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2033811-2033922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2033210-2033297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2032498-2032648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2031579-2031755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2031122-2031319:-1:exon

ddt
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: ddt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2034465..2037041)
location: region:2034465-2037041:-1
so has part: feature:2034465-2037041:-1:exon
subclass of: SO_0000010

113590036
type: Gene
SIO_000068: ncbigene

position:2034465:-1
position: 2034465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037041:-1
position: 2037041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2034465-2037041:-1:exon

ddt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: ddt
product: D-dopachrome tautomerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_027029985.2
SIO_010081: ddt
subclass of: SO_0000673
so part of: ddt
location: complement(join(2034465..2034965,2036474..2036649,2036853..2037041))
location: region:2034465-2037041:-1
so has part: feature:2036853-2037041:-1:exon
so has part: feature:2036474-2036649:-1:exon
so has part: feature:2034465-2034965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2036853-2037041:-1:exon

position:2036853:-1
position: 2036853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2036474-2036649:-1:exon

position:2036474:-1
position: 2036474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036649:-1
position: 2036649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2034465-2034965:-1:exon

position:2034965:-1
position: 2034965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ddt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: ddt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-dopachrome decarboxylase
translation: MPFIDLETNLPASKFSEDFLKKLCSTTAATLGKPEDRMSLVVKPDLPMLVAGSSAPCMLVSVSAVAVTDTAEKNKEHSAKIFQFLTHELGIGEDRIVIRFYPLEPWQVGKKGTVMSFL
SIO_010081: ddt
subclass of: SO_0000673
so part of: ddt
location: complement(join(2034893..2034965,2036474..2036649,2036853..2036960))
location: region:2034893-2036960:-1
so has part: feature:2036853-2036960:-1:exon
so has part: feature:2036474-2036649:-1:exon
so has part: feature:2034893-2034965:-1:exon

XP_026885786.1
type: Protein
SIO_000068: ncbiprotein

position:2034893:-1
position: 2034893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036960:-1
position: 2036960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2036853-2036960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2036474-2036649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2034893-2034965:-1:exon

chchd10
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: chchd10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2038326..2040348)
location: region:2038326-2040348:-1
so has part: feature:2038326-2040348:-1:exon
subclass of: SO_0000010

113590045
type: Gene
SIO_000068: ncbigene

position:2038326:-1
position: 2038326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2040348:-1
position: 2040348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038326-2040348:-1:exon

chchd10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: chchd10
product: coiled-coil-helix-coiled-coil-helix domain containing 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027030000.2
SIO_010081: chchd10
subclass of: SO_0000673
so part of: chchd10
location: complement(join(2038326..2038650,2038892..2039039,2039380..2039599,2040210..2040348))
location: region:2038326-2040348:-1
so has part: feature:2040210-2040348:-1:exon
so has part: feature:2039380-2039599:-1:exon
so has part: feature:2038892-2039039:-1:exon
so has part: feature:2038326-2038650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2040210-2040348:-1:exon

position:2040210:-1
position: 2040210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2039380-2039599:-1:exon

position:2039380:-1
position: 2039380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039599:-1
position: 2039599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2038892-2039039:-1:exon

position:2038892:-1
position: 2038892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039039:-1
position: 2039039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2038326-2038650:-1:exon

position:2038650:-1
position: 2038650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chchd10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: chchd10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial
translation: MARGSRSRPSASASAPAHSFAPASVAPPPSALAPQQPKQPGLMAQMATTAAGVAVGSAVGHVMGSALTGAFSGGGSSEAAKPAPTYQSQDPPPSTPPQAGPCLLEVRQFLDCATTQTDLSLCEGFSEVLKQCKFSHGVSSLV
SIO_010081: chchd10
subclass of: SO_0000673
so part of: chchd10
location: complement(join(2038631..2038650,2038892..2039039,2039380..2039599,2040210..2040250))
location: region:2038631-2040250:-1
so has part: feature:2040210-2040250:-1:exon
so has part: feature:2039380-2039599:-1:exon
so has part: feature:2038892-2039039:-1:exon
so has part: feature:2038631-2038650:-1:exon

XP_026885801.1
type: Protein
SIO_000068: ncbiprotein

position:2038631:-1
position: 2038631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2040250:-1
position: 2040250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2040210-2040250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2039380-2039599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2038892-2039039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2038631-2038650:-1:exon

scamp1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: scamp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2041724..2059162)
location: region:2041724-2059162:-1
so has part: feature:2041724-2059162:-1:exon
subclass of: SO_0000010

113590042
type: Gene
SIO_000068: ncbigene

position:2041724:-1
position: 2041724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059162:-1
position: 2059162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2041724-2059162:-1:exon

scamp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: scamp1
product: secretory carrier membrane protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027029996.2
SIO_010081: scamp1
subclass of: SO_0000673
so part of: scamp1
location: complement(join(2041724..2043787,2043924..2044041,2044204..2044305,2044603..2044762,2045929..2046057,2046284..2046395,2050919..2051020,2058951..2059162))
location: region:2041724-2059162:-1
so has part: feature:2058951-2059162:-1:exon
so has part: feature:2050919-2051020:-1:exon
so has part: feature:2046284-2046395:-1:exon
so has part: feature:2045929-2046057:-1:exon
so has part: feature:2044603-2044762:-1:exon
so has part: feature:2044204-2044305:-1:exon
so has part: feature:2043924-2044041:-1:exon
so has part: feature:2041724-2043787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2058951-2059162:-1:exon

position:2058951:-1
position: 2058951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2050919-2051020:-1:exon

position:2050919:-1
position: 2050919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2051020:-1
position: 2051020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2046284-2046395:-1:exon

position:2046284:-1
position: 2046284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046395:-1
position: 2046395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2045929-2046057:-1:exon

position:2045929:-1
position: 2045929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046057:-1
position: 2046057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2044603-2044762:-1:exon

position:2044603:-1
position: 2044603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044762:-1
position: 2044762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2044204-2044305:-1:exon

position:2044204:-1
position: 2044204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044305:-1
position: 2044305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2043924-2044041:-1:exon

position:2043924:-1
position: 2043924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044041:-1
position: 2044041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2041724-2043787:-1:exon

position:2043787:-1
position: 2043787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

scamp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: scamp1
product: secretory carrier membrane protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027029995.2
SIO_010081: scamp1
subclass of: SO_0000673
so part of: scamp1
location: complement(join(2041724..2043787,2043924..2044041,2044204..2044305,2044603..2044762,2045929..2046057,2046284..2046395,2050919..2051020,2051112..2051189,2058951..2059162))
location: region:2041724-2059162:-1
so has part: feature:2058951-2059162:-1:exon
so has part: feature:2051112-2051189:-1:exon
so has part: feature:2050919-2051020:-1:exon
so has part: feature:2046284-2046395:-1:exon
so has part: feature:2045929-2046057:-1:exon
so has part: feature:2044603-2044762:-1:exon
so has part: feature:2044204-2044305:-1:exon
so has part: feature:2043924-2044041:-1:exon
so has part: feature:2041724-2043787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2058951-2059162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2051112-2051189:-1:exon

position:2051112:-1
position: 2051112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2051189:-1
position: 2051189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2050919-2051020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046284-2046395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2045929-2046057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2044603-2044762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2044204-2044305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2043924-2044041:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2041724-2043787:-1:exon

scamp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: scamp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 1 isoform X2
translation: MSDFDSNPFADPDFSNPFQAAGPKTVPPTTNTQPAIMKPTEEPPAYSQPQQTQDQVRAQAELMRRQEELERKAAELDRREREMQSLNASGGRKNNWPPLPEKFPVGPCFYHDISVDIPVEFQKTVKIMYYLWMFHTGTLLLNILGCLAWFCVDSMRGVDFGLAMLWFMLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFGVHVMQAIGITGWGTSGWISALTALNKSIPVGIIMILIAALFTALAVISLIMFKKVHGLYRTTGASFEKAQQEFATGVMSNKTVQTAAANAASNAARGAFKDQL
SIO_010081: scamp1
subclass of: SO_0000673
so part of: scamp1
location: complement(join(2043638..2043787,2043924..2044041,2044204..2044305,2044603..2044762,2045929..2046057,2046284..2046395,2050919..2051020,2058951..2059007))
location: region:2043638-2059007:-1
so has part: feature:2058951-2059007:-1:exon
so has part: feature:2050919-2051020:-1:exon
so has part: feature:2046284-2046395:-1:exon
so has part: feature:2045929-2046057:-1:exon
so has part: feature:2044603-2044762:-1:exon
so has part: feature:2044204-2044305:-1:exon
so has part: feature:2043924-2044041:-1:exon
so has part: feature:2043638-2043787:-1:exon

XP_026885797.1
type: Protein
SIO_000068: ncbiprotein

position:2043638:-1
position: 2043638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059007:-1
position: 2059007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2058951-2059007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2050919-2051020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2046284-2046395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2045929-2046057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2044603-2044762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2044204-2044305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2043924-2044041:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2043638-2043787:-1:exon

scamp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: scamp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 1 isoform X1
translation: MSDFDSNPFADPDFSNPFQDPSVTQVTRSAPPGLEEYNPFTHTKPAAGPKTVPPTTNTQPAIMKPTEEPPAYSQPQQTQDQVRAQAELMRRQEELERKAAELDRREREMQSLNASGGRKNNWPPLPEKFPVGPCFYHDISVDIPVEFQKTVKIMYYLWMFHTGTLLLNILGCLAWFCVDSMRGVDFGLAMLWFMLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFGVHVMQAIGITGWGTSGWISALTALNKSIPVGIIMILIAALFTALAVISLIMFKKVHGLYRTTGASFEKAQQEFATGVMSNKTVQTAAANAASNAARGAFKDQL
SIO_010081: scamp1
subclass of: SO_0000673
so part of: scamp1
location: complement(join(2043638..2043787,2043924..2044041,2044204..2044305,2044603..2044762,2045929..2046057,2046284..2046395,2050919..2051020,2051112..2051189,2058951..2059007))
location: region:2043638-2059007:-1
so has part: feature:2058951-2059007:-1:exon
so has part: feature:2051112-2051189:-1:exon
so has part: feature:2050919-2051020:-1:exon
so has part: feature:2046284-2046395:-1:exon
so has part: feature:2045929-2046057:-1:exon
so has part: feature:2044603-2044762:-1:exon
so has part: feature:2044204-2044305:-1:exon
so has part: feature:2043924-2044041:-1:exon
so has part: feature:2043638-2043787:-1:exon

XP_026885796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2058951-2059007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2051112-2051189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2050919-2051020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046284-2046395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2045929-2046057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2044603-2044762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2044204-2044305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2043924-2044041:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2043638-2043787:-1:exon

LOC113590049
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113590049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2060336..2064381
location: region:2060336-2064381:1
so has part: feature:2060336-2064381:1:exon
subclass of: SO_0000010

113590049
type: Gene
SIO_000068: ncbigene

position:2060336:1
position: 2060336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064381:1
position: 2064381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060336-2064381:1:exon

LOC113590049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113590049
product: torsin-1A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027030008.2
SIO_010081: LOC113590049
subclass of: SO_0000673
so part of: LOC113590049
location: join(2060336..2061252,2061835..2062100,2062238..2062413,2063071..2063198,2063488..2064381)
location: region:2060336-2064381:1
so has part: feature:2060336-2061252:1:exon
so has part: feature:2061835-2062100:1:exon
so has part: feature:2062238-2062413:1:exon
so has part: feature:2063071-2063198:1:exon
so has part: feature:2063488-2064381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2060336-2061252:1:exon

position:2061252:1
position: 2061252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2061835-2062100:1:exon

position:2061835:1
position: 2061835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062100:1
position: 2062100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2062238-2062413:1:exon

position:2062238:1
position: 2062238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062413:1
position: 2062413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2063071-2063198:1:exon

position:2063071:1
position: 2063071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063198:1
position: 2063198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2063488-2064381:1:exon

position:2063488:1
position: 2063488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113590049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113590049
product: torsin-1A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027030006.2
SIO_010081: LOC113590049
subclass of: SO_0000673
so part of: LOC113590049
location: join(2060338..2061252,2061835..2062100,2062238..2062413,2063071..2063198,2063461..2064381)
location: region:2060338-2064381:1
so has part: feature:2060338-2061252:1:exon
so has part: feature:2061835-2062100:1:exon
so has part: feature:2062238-2062413:1:exon
so has part: feature:2063071-2063198:1:exon
so has part: feature:2063461-2064381:1:exon

position:2060338:1
position: 2060338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060338-2061252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2061835-2062100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2062238-2062413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2063071-2063198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2063461-2064381:1:exon

position:2063461:1
position: 2063461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113590049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113590049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-1A-like isoform X1
translation: MRLPCSAPLLCMGCHLIAVAAIEPVSTGLALGIAAAVTGFLARYQNVLYYFQECCRPEWISYNKTGLQEDLEEKLFGQHVASRVILKAVTGFMNSENPKKPLVLSLHGWTGTGKNFVSQLIAENIYQKGMASGFVHLFTATAHFPHEVHLETYKAQLQQWIKGNVTNCPRSMFIFDEMDKMHPGLIDGIKPYLDFYERLDGVSYRQAIFIFLSNAGGEKIVQVALDFWTSGREREEIELKDLEMALSLSVFNNKNSGFWHTSLIDKNLVDFFVPFLPLEFKHVVQCGLAEMAAKGLTPDAAVVDHMARDMNYFPKDERVFSMKGCKAISSRLDFYID
SIO_010081: LOC113590049
subclass of: SO_0000673
so part of: LOC113590049
location: join(2061057..2061252,2061835..2062100,2062238..2062413,2063071..2063198,2063461..2063708)
location: region:2061057-2063708:1
so has part: feature:2061057-2061252:1:exon
so has part: feature:2061835-2062100:1:exon
so has part: feature:2062238-2062413:1:exon
so has part: feature:2063071-2063198:1:exon
so has part: feature:2063461-2063708:1:exon

XP_026885807.2
type: Protein
SIO_000068: ncbiprotein

position:2061057:1
position: 2061057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063708:1
position: 2063708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2061057-2061252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2061835-2062100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2062238-2062413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2063071-2063198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2063461-2063708:1:exon

LOC113590049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113590049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-1A-like isoform X2
translation: MRLPCSAPLLCMGCHLIAVAAIEPVSTGLALGIAAAVTGFLARYQNVLYYFQECCRPEWISYNKTGLQEDLEEKLFGQHVASRVILKAVTGFMNSENPKKPLVLSLHGWTGTGKNFVSQLIAENIYQKGMASGFVHLFTATAHFPHEVHLETYKAQLQQWIKGNVTNCPRSMFIFDEMDKMHPGLIDGIKPYLDFYERLDGVSYRQAIFIFLSNAGGEKIVQVALDFWTSGREREEIELKDLEMALSLSVFNNKNNKNLVDFFVPFLPLEFKHVVQCGLAEMAAKGLTPDAAVVDHMARDMNYFPKDERVFSMKGCKAISSRLDFYID
SIO_010081: LOC113590049
subclass of: SO_0000673
so part of: LOC113590049
location: join(2061057..2061252,2061835..2062100,2062238..2062413,2063071..2063198,2063488..2063708)
location: region:2061057-2063708:1
so has part: feature:2061057-2061252:1:exon
so has part: feature:2061835-2062100:1:exon
so has part: feature:2062238-2062413:1:exon
so has part: feature:2063071-2063198:1:exon
so has part: feature:2063488-2063708:1:exon

XP_026885809.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2061057-2061252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2061835-2062100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2062238-2062413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2063071-2063198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2063488-2063708:1:exon

LOC118240644
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2067018..2071206
location: region:2067018-2071206:1
so has part: feature:2067018-2071206:1:exon
subclass of: SO_0000010

118240644
type: Gene
SIO_000068: ncbigene

position:2067018:1
position: 2067018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071206:1
position: 2071206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2067018-2071206:1:exon

LOC118240644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240644
product: torsin-1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521716.1
SIO_010081: LOC118240644
subclass of: SO_0000673
so part of: LOC118240644
location: join(2067018..2067047,2067237..2067309,2067568..2067833,2067971..2068146,2068833..2068960,2069394..2071206)
location: region:2067018-2071206:1
so has part: feature:2067018-2067047:1:exon
so has part: feature:2067237-2067309:1:exon
so has part: feature:2067568-2067833:1:exon
so has part: feature:2067971-2068146:1:exon
so has part: feature:2068833-2068960:1:exon
so has part: feature:2069394-2071206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2067018-2067047:1:exon

position:2067047:1
position: 2067047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2067237-2067309:1:exon

position:2067237:1
position: 2067237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067309:1
position: 2067309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2067568-2067833:1:exon

position:2067568:1
position: 2067568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067833:1
position: 2067833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2067971-2068146:1:exon

position:2067971:1
position: 2067971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068146:1
position: 2068146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2068833-2068960:1:exon

position:2068833:1
position: 2068833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068960:1
position: 2068960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2069394-2071206:1:exon

position:2069394:1
position: 2069394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-1A-like
translation: MTTGSVLTQPRFRFITALFVAAASPFKDTFCESEGLQEDLEEKLFGQHVASRVILKAVTGFMNSENPKKPLVLSLHGWTGTGKIFVSQLIAENIYQKGMASGFVHLFAATAHFPHEVHLETYKAQLQQWIKGNVTNCPRSMFIFDEMDKMHPGLIDGIKPYLDFYERLDGVSYRQAIFIFLSNAGGEKIVQVALDFWTSGREREEIELKDLEMALSLSVFNNKNSGLWHSNLIDKNLVDFFVPFLPLEFKHVVQCGLAEMAAKGLTPDAAVVDHMARDMNYFPKDERVFSLHGCKAISNQLDFYID
SIO_010081: LOC118240644
subclass of: SO_0000673
so part of: LOC118240644
location: join(2067018..2067047,2067237..2067309,2067568..2067833,2067971..2068146,2068833..2068960,2069394..2069641)
location: region:2067018-2069641:1
so has part: feature:2067018-2067047:1:exon
so has part: feature:2067237-2067309:1:exon
so has part: feature:2067568-2067833:1:exon
so has part: feature:2067971-2068146:1:exon
so has part: feature:2068833-2068960:1:exon
so has part: feature:2069394-2069641:1:exon

XP_035377609.1
type: Protein
SIO_000068: ncbiprotein

position:2069641:1
position: 2069641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2067018-2067047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2067237-2067309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2067568-2067833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2067971-2068146:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2068833-2068960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2069394-2069641:1:exon

LOC118240645
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2073123..2075445)
location: region:2073123-2075445:-1
so has part: feature:2073123-2075445:-1:exon
subclass of: SO_0000010

118240645
type: Gene
SIO_000068: ncbigene

position:2073123:-1
position: 2073123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2075445:-1
position: 2075445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2073123-2075445:-1:exon

LOC118240645
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240645
product: ribosome biogenesis protein NSA2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521717.1
SIO_010081: LOC118240645
subclass of: SO_0000673
so part of: LOC118240645
location: complement(join(2073123..2073266,2074200..2074392,2074694..2074873,2075440..2075445))
location: region:2073123-2075445:-1
so has part: feature:2075440-2075445:-1:exon
so has part: feature:2074694-2074873:-1:exon
so has part: feature:2074200-2074392:-1:exon
so has part: feature:2073123-2073266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2075440-2075445:-1:exon

position:2075440:-1
position: 2075440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2074694-2074873:-1:exon

position:2074694:-1
position: 2074694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2074873:-1
position: 2074873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2074200-2074392:-1:exon

position:2074200:-1
position: 2074200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2074392:-1
position: 2074392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2073123-2073266:-1:exon

position:2073266:-1
position: 2073266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NSA2 homolog
translation: MQGKWEVPVPKVRAQGETEVLKVVRTGKRQKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV
SIO_010081: LOC118240645
subclass of: SO_0000673
so part of: LOC118240645
location: complement(join(2073199..2073266,2074200..2074392,2074694..2074873,2075440..2075445))
location: region:2073199-2075445:-1
so has part: feature:2075440-2075445:-1:exon
so has part: feature:2074694-2074873:-1:exon
so has part: feature:2074200-2074392:-1:exon
so has part: feature:2073199-2073266:-1:exon

XP_035377610.1
type: Protein
SIO_000068: ncbiprotein

position:2073199:-1
position: 2073199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2075440-2075445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2074694-2074873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2074200-2074392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2073199-2073266:-1:exon

LOC118240646
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2078111..2082824
location: region:2078111-2082824:1
so has part: feature:2078111-2082824:1:exon

118240646
type: Gene
SIO_000068: ncbigene

position:2078111:1
position: 2078111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2082824:1
position: 2082824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2078111-2082824:1:exon

LOC118240646
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240646
subclass of: SO_0000673
so part of: LOC118240646
location: 2078111..2078140
location: region:2078111-2078140:1
so has part: feature:2078111-2078140:1:exon

position:2078140:1
position: 2078140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2078111-2078140:1:exon

LOC118240646
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240646
subclass of: SO_0000673
so part of: LOC118240646
location: 2078330..2078402
location: region:2078330-2078402:1
so has part: feature:2078330-2078402:1:exon

position:2078330:1
position: 2078330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078402:1
position: 2078402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2078330-2078402:1:exon

LOC118240646
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240646
subclass of: SO_0000673
so part of: LOC118240646
location: 2078661..2078926
location: region:2078661-2078926:1
so has part: feature:2078661-2078926:1:exon

position:2078661:1
position: 2078661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078926:1
position: 2078926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2078661-2078926:1:exon

LOC118240646
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240646
subclass of: SO_0000673
so part of: LOC118240646
location: 2079064..2079239
location: region:2079064-2079239:1
so has part: feature:2079064-2079239:1:exon

position:2079064:1
position: 2079064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2079239:1
position: 2079239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2079064-2079239:1:exon

LOC118240646
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240646
subclass of: SO_0000673
so part of: LOC118240646
location: 2079914..2080041
location: region:2079914-2080041:1
so has part: feature:2079914-2080041:1:exon

position:2079914:1
position: 2079914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080041:1
position: 2080041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2079914-2080041:1:exon

LOC118240646
type: Exon
subclass of: SO_0000147
RO_0002162: 8005
gene: LOC118240646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118240646
subclass of: SO_0000673
so part of: LOC118240646
location: 2080463..2082824
location: region:2080463-2082824:1
so has part: feature:2080463-2082824:1:exon

position:2080463:1
position: 2080463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2080463-2082824:1:exon

LOC118240647
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2083453..2086629)
location: region:2083453-2086629:-1
so has part: feature:2083453-2086629:-1:exon
subclass of: SO_0000010

118240647
type: Gene
SIO_000068: ncbigene

position:2083453:-1
position: 2083453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086629:-1
position: 2086629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2083453-2086629:-1:exon

LOC118240647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240647
product: ribosome biogenesis protein NSA2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521718.1
SIO_010081: LOC118240647
subclass of: SO_0000673
so part of: LOC118240647
location: complement(join(2083453..2084306,2085384..2085576,2085878..2086057,2086624..2086629))
location: region:2083453-2086629:-1
so has part: feature:2086624-2086629:-1:exon
so has part: feature:2085878-2086057:-1:exon
so has part: feature:2085384-2085576:-1:exon
so has part: feature:2083453-2084306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2086624-2086629:-1:exon

position:2086624:-1
position: 2086624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2085878-2086057:-1:exon

position:2085878:-1
position: 2085878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086057:-1
position: 2086057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2085384-2085576:-1:exon

position:2085384:-1
position: 2085384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2085576:-1
position: 2085576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2083453-2084306:-1:exon

position:2084306:-1
position: 2084306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NSA2 homolog
translation: MQGKWEVPVPKVRAQGETEVLKVVRTGKRQKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV
SIO_010081: LOC118240647
subclass of: SO_0000673
so part of: LOC118240647
location: complement(join(2084239..2084306,2085384..2085576,2085878..2086057,2086624..2086629))
location: region:2084239-2086629:-1
so has part: feature:2086624-2086629:-1:exon
so has part: feature:2085878-2086057:-1:exon
so has part: feature:2085384-2085576:-1:exon
so has part: feature:2084239-2084306:-1:exon

XP_035377611.1
type: Protein
SIO_000068: ncbiprotein

position:2084239:-1
position: 2084239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2086624-2086629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2085878-2086057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2085384-2085576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2084239-2084306:-1:exon

LOC113590040
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113590040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2088263..2093442
location: region:2088263-2093442:1
so has part: feature:2088263-2093442:1:exon
subclass of: SO_0000010

113590040
type: Gene
SIO_000068: ncbigene

position:2088263:1
position: 2088263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2093442:1
position: 2093442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2088263-2093442:1:exon

LOC113590040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113590040
product: torsin-1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521719.1
SIO_010081: LOC113590040
subclass of: SO_0000673
so part of: LOC113590040
location: join(2088263..2088271,2089515..2089587,2089846..2090111,2090249..2090424,2091107..2091234,2091624..2093442)
location: region:2088263-2093442:1
so has part: feature:2088263-2088271:1:exon
so has part: feature:2089515-2089587:1:exon
so has part: feature:2089846-2090111:1:exon
so has part: feature:2090249-2090424:1:exon
so has part: feature:2091107-2091234:1:exon
so has part: feature:2091624-2093442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2088263-2088271:1:exon

position:2088271:1
position: 2088271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2089515-2089587:1:exon

position:2089515:1
position: 2089515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089587:1
position: 2089587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2089846-2090111:1:exon

position:2089846:1
position: 2089846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090111:1
position: 2090111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2090249-2090424:1:exon

position:2090249:1
position: 2090249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090424:1
position: 2090424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2091107-2091234:1:exon

position:2091107:1
position: 2091107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2091234:1
position: 2091234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2091624-2093442:1:exon

position:2091624:1
position: 2091624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113590040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113590040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-1A-like
translation: MAMRFRFITALFVAAASPFKDTFCESEGLQEDLEEKLFGQHVASRVILKAVTGFMNSENPKKPLVLSLHGWTGTGKNFVSQLIAENIYQKGMASGFVHLFTATAHSPHKVHLETYKAQLQQWIKGNVTNCPRSMFIFDEMDKMHPGLIDGIKPYLDFYERLDGVSYRQAIFIFLSNAGAEEIVHVALDFWTSGREREEIELKDLEMALSLSVFNNKNSGLWHSNLIDKNLVDFFVPFLPLEFKHVVQCGMAEMAAKGLTPDAAVVDHMARDINYFPKDERVFSMKGCKVISNRLDFYID
SIO_010081: LOC113590040
subclass of: SO_0000673
so part of: LOC113590040
location: join(2088263..2088271,2089515..2089587,2089846..2090111,2090249..2090424,2091107..2091234,2091624..2091871)
location: region:2088263-2091871:1
so has part: feature:2088263-2088271:1:exon
so has part: feature:2089515-2089587:1:exon
so has part: feature:2089846-2090111:1:exon
so has part: feature:2090249-2090424:1:exon
so has part: feature:2091107-2091234:1:exon
so has part: feature:2091624-2091871:1:exon

XP_035377612.1
type: Protein
SIO_000068: ncbiprotein

position:2091871:1
position: 2091871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2088263-2088271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089515-2089587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089846-2090111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2090249-2090424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2091107-2091234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2091624-2091871:1:exon

LOC118240648
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2094601..2097638)
location: region:2094601-2097638:-1
so has part: feature:2094601-2097638:-1:exon
subclass of: SO_0000010

118240648
type: Gene
SIO_000068: ncbigene

position:2094601:-1
position: 2094601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097638:-1
position: 2097638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2094601-2097638:-1:exon

LOC118240648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240648
product: ribosome biogenesis protein NSA2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521720.1
SIO_010081: LOC118240648
subclass of: SO_0000673
so part of: LOC118240648
location: complement(join(2094601..2095458,2096392..2096584,2096887..2097066,2097633..2097638))
location: region:2094601-2097638:-1
so has part: feature:2097633-2097638:-1:exon
so has part: feature:2096887-2097066:-1:exon
so has part: feature:2096392-2096584:-1:exon
so has part: feature:2094601-2095458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2097633-2097638:-1:exon

position:2097633:-1
position: 2097633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2096887-2097066:-1:exon

position:2096887:-1
position: 2096887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097066:-1
position: 2097066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2096392-2096584:-1:exon

position:2096392:-1
position: 2096392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096584:-1
position: 2096584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2094601-2095458:-1:exon

position:2095458:-1
position: 2095458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NSA2 homolog
translation: MQGKWEVPVPKVRAQGETEVLKVVRTGKRQKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLFTQGGKVIWGKYAQVTNNPENDGCINAVLLV
SIO_010081: LOC118240648
subclass of: SO_0000673
so part of: LOC118240648
location: complement(join(2095391..2095458,2096392..2096584,2096887..2097066,2097633..2097638))
location: region:2095391-2097638:-1
so has part: feature:2097633-2097638:-1:exon
so has part: feature:2096887-2097066:-1:exon
so has part: feature:2096392-2096584:-1:exon
so has part: feature:2095391-2095458:-1:exon

XP_035377613.1
type: Protein
SIO_000068: ncbiprotein

position:2095391:-1
position: 2095391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2097633-2097638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2096887-2097066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2096392-2096584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2095391-2095458:-1:exon

LOC118240649
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2099271..2104398
location: region:2099271-2104398:1
so has part: feature:2099271-2104398:1:exon
subclass of: SO_0000010

118240649
type: Gene
SIO_000068: ncbigene

position:2099271:1
position: 2099271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104398:1
position: 2104398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2099271-2104398:1:exon

LOC118240649
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240649
product: torsin-1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521721.1
SIO_010081: LOC118240649
subclass of: SO_0000673
so part of: LOC118240649
location: join(2099271..2099279,2100522..2100594,2100853..2101118,2101256..2101431,2102114..2102241,2102579..2104398)
location: region:2099271-2104398:1
so has part: feature:2099271-2099279:1:exon
so has part: feature:2100522-2100594:1:exon
so has part: feature:2100853-2101118:1:exon
so has part: feature:2101256-2101431:1:exon
so has part: feature:2102114-2102241:1:exon
so has part: feature:2102579-2104398:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2099271-2099279:1:exon

position:2099279:1
position: 2099279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2100522-2100594:1:exon

position:2100522:1
position: 2100522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100594:1
position: 2100594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2100853-2101118:1:exon

position:2100853:1
position: 2100853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101118:1
position: 2101118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2101256-2101431:1:exon

position:2101256:1
position: 2101256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101431:1
position: 2101431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2102114-2102241:1:exon

position:2102114:1
position: 2102114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102241:1
position: 2102241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2102579-2104398:1:exon

position:2102579:1
position: 2102579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240649
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-1A-like
translation: MAMRFRFITALFVAAASPFKDTFCESEGLQEDLEEKLFGQHVASRVILKAVTGFMNSENPKKPLVLSLHGWTGTGKNFVSQLIAENIYQKGMASGFVHLFTATAHSPHKVHLETYKAQLQQWIKGNVTNCPRSMFIFDEMDKMHPGLIDGIKPYLDFYERLDGVSYRQAIFIFLSNAGAEEIVHVALDFWTSGREREEIELKDLEMALSLSVFNNKNSGLWHSNLIDKNLVDFFVPFLPLEFKHVVQCGMAEMAAKGLTPDAAVVDHMARDMNYFPKDERVFSLHGCKVISIRLDFYID
SIO_010081: LOC118240649
subclass of: SO_0000673
so part of: LOC118240649
location: join(2099271..2099279,2100522..2100594,2100853..2101118,2101256..2101431,2102114..2102241,2102579..2102826)
location: region:2099271-2102826:1
so has part: feature:2099271-2099279:1:exon
so has part: feature:2100522-2100594:1:exon
so has part: feature:2100853-2101118:1:exon
so has part: feature:2101256-2101431:1:exon
so has part: feature:2102114-2102241:1:exon
so has part: feature:2102579-2102826:1:exon

XP_035377614.1
type: Protein
SIO_000068: ncbiprotein

position:2102826:1
position: 2102826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2099271-2099279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2100522-2100594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2100853-2101118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101256-2101431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2102114-2102241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2102579-2102826:1:exon

LOC118240650
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2105561..2108582)
location: region:2105561-2108582:-1
so has part: feature:2105561-2108582:-1:exon
subclass of: SO_0000010

118240650
type: Gene
SIO_000068: ncbigene

position:2105561:-1
position: 2105561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108582:-1
position: 2108582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2105561-2108582:-1:exon

LOC118240650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240650
product: ribosome biogenesis protein NSA2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035521722.1
SIO_010081: LOC118240650
subclass of: SO_0000673
so part of: LOC118240650
location: complement(join(2105561..2106402,2107336..2107528,2107831..2108010,2108577..2108582))
location: region:2105561-2108582:-1
so has part: feature:2108577-2108582:-1:exon
so has part: feature:2107831-2108010:-1:exon
so has part: feature:2107336-2107528:-1:exon
so has part: feature:2105561-2106402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2108577-2108582:-1:exon

position:2108577:-1
position: 2108577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2107831-2108010:-1:exon

position:2107831:-1
position: 2107831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108010:-1
position: 2108010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2107336-2107528:-1:exon

position:2107336:-1
position: 2107336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2107528:-1
position: 2107528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2105561-2106402:-1:exon

position:2106402:-1
position: 2106402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118240650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NSA2 homolog
translation: MQGKWEVPVPKVRAQGETEVLKVVRTGKRQKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV
SIO_010081: LOC118240650
subclass of: SO_0000673
so part of: LOC118240650
location: complement(join(2106335..2106402,2107336..2107528,2107831..2108010,2108577..2108582))
location: region:2106335-2108582:-1
so has part: feature:2108577-2108582:-1:exon
so has part: feature:2107831-2108010:-1:exon
so has part: feature:2107336-2107528:-1:exon
so has part: feature:2106335-2106402:-1:exon

XP_035377615.1
type: Protein
SIO_000068: ncbiprotein

position:2106335:-1
position: 2106335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2108577-2108582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2107831-2108010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2107336-2107528:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2106335-2106402:-1:exon

LOC118240079
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC118240079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2111015..2115396
location: region:2111015-2115396:1
so has part: feature:2111015-2115396:1:exon
subclass of: SO_0000010

118240079
type: Gene
SIO_000068: ncbigene

position:2111015:1
position: 2111015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115396:1
position: 2115396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111015-2115396:1:exon

LOC118240079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240079
product: torsin-1A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035521447.1
SIO_010081: LOC118240079
subclass of: SO_0000673
so part of: LOC118240079
location: join(2111015..2111283,2111804..2112069,2112207..2112382,2113065..2113192,2113586..2115396)
location: region:2111015-2115396:1
so has part: feature:2111015-2111283:1:exon
so has part: feature:2111804-2112069:1:exon
so has part: feature:2112207-2112382:1:exon
so has part: feature:2113065-2113192:1:exon
so has part: feature:2113586-2115396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2111015-2111283:1:exon

position:2111283:1
position: 2111283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2111804-2112069:1:exon

position:2111804:1
position: 2111804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112069:1
position: 2112069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2112207-2112382:1:exon

position:2112207:1
position: 2112207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112382:1
position: 2112382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2113065-2113192:1:exon

position:2113065:1
position: 2113065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113192:1
position: 2113192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2113586-2115396:1:exon

position:2113586:1
position: 2113586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC118240079
product: torsin-1A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035521448.1
SIO_010081: LOC118240079
subclass of: SO_0000673
so part of: LOC118240079
location: join(2111015..2111283,2111804..2112069,2112207..2112382,2113065..2113192,2113613..2115396)
location: region:2111015-2115396:1
so has part: feature:2111015-2111283:1:exon
so has part: feature:2111804-2112069:1:exon
so has part: feature:2112207-2112382:1:exon
so has part: feature:2113065-2113192:1:exon
so has part: feature:2113613-2115396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2111015-2111283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2111804-2112069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2112207-2112382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2113065-2113192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2113613-2115396:1:exon

position:2113613:1
position: 2113613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118240079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-1A-like isoform X1
translation: MKETFSALFHFILISSVVVHAFEPISTTIVAGLGAAALGKKLYNYLFETCDDNWIGFNATGLQEDLEEKLFGQHVASRVILKAVTGFMNSENPKKPLVLSLHGWTGTGKIFVSQLIAENIYQKGMASGFVHLFLATEHFPHEVHLETYKAQLQQWIKGNVTNCPRSMFIFDEMDKMHPGLIDGIKPYLDFYERLDGVSYRQAIFIFLSNAGGEEIVHVALDFWTSGREREEIKLKDLEMALSLSVFNNKNSGLWHSNLIDKNLVDFFVPFLPLEFKHVVQCGMAEMADKGLTPDAAVVDHMARDMNYFPKDERVFSIKGCKVISSRLDFYID
SIO_010081: LOC118240079
subclass of: SO_0000673
so part of: LOC118240079
location: join(2111103..2111283,2111804..2112069,2112207..2112382,2113065..2113192,2113586..2113833)
location: region:2111103-2113833:1
so has part: feature:2111103-2111283:1:exon
so has part: feature:2111804-2112069:1:exon
so has part: feature:2112207-2112382:1:exon
so has part: feature:2113065-2113192:1:exon
so has part: feature:2113586-2113833:1:exon

XP_035377340.1
type: Protein
SIO_000068: ncbiprotein

position:2111103:1
position: 2111103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113833:1
position: 2113833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111103-2111283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2111804-2112069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2112207-2112382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2113065-2113192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2113586-2113833:1:exon

LOC118240079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC118240079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-1A-like isoform X2
translation: MKETFSALFHFILISSVVVHAFEPISTTIVAGLGAAALGKKLYNYLFETCDDNWIGFNATGLQEDLEEKLFGQHVASRVILKAVTGFMNSENPKKPLVLSLHGWTGTGKIFVSQLIAENIYQKGMASGFVHLFLATEHFPHEVHLETYKAQLQQWIKGNVTNCPRSMFIFDEMDKMHPGLIDGIKPYLDFYERLDGVSYRQAIFIFLSNAGGEEIVHVALDFWTSGREREEIKLKDLEMALSLSVFNNKNNKNLVDFFVPFLPLEFKHVVQCGMAEMADKGLTPDAAVVDHMARDMNYFPKDERVFSIKGCKVISSRLDFYID
SIO_010081: LOC118240079
subclass of: SO_0000673
so part of: LOC118240079
location: join(2111103..2111283,2111804..2112069,2112207..2112382,2113065..2113192,2113613..2113833)
location: region:2111103-2113833:1
so has part: feature:2111103-2111283:1:exon
so has part: feature:2111804-2112069:1:exon
so has part: feature:2112207-2112382:1:exon
so has part: feature:2113065-2113192:1:exon
so has part: feature:2113613-2113833:1:exon

XP_035377341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2111103-2111283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2111804-2112069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2112207-2112382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2113065-2113192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2113613-2113833:1:exon

LOC113590041
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113590041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2116888..2121482)
location: region:2116888-2121482:-1
so has part: feature:2116888-2121482:-1:exon
subclass of: SO_0000010

113590041
type: Gene
SIO_000068: ncbigene

position:2116888:-1
position: 2116888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121482:-1
position: 2121482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2116888-2121482:-1:exon

LOC113590041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113590041
product: NSA2 ribosome biogenesis homolog (S. cerevisiae)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027029994.2
SIO_010081: LOC113590041
subclass of: SO_0000673
so part of: LOC113590041
location: complement(join(2116888..2117420,2118354..2118546,2118850..2119029,2119208..2119358,2119757..2119944,2121326..2121482))
location: region:2116888-2121482:-1
so has part: feature:2121326-2121482:-1:exon
so has part: feature:2119757-2119944:-1:exon
so has part: feature:2119208-2119358:-1:exon
so has part: feature:2118850-2119029:-1:exon
so has part: feature:2118354-2118546:-1:exon
so has part: feature:2116888-2117420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2121326-2121482:-1:exon

position:2121326:-1
position: 2121326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2119757-2119944:-1:exon

position:2119757:-1
position: 2119757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119944:-1
position: 2119944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2119208-2119358:-1:exon

position:2119208:-1
position: 2119208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119358:-1
position: 2119358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2118850-2119029:-1:exon

position:2118850:-1
position: 2118850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119029:-1
position: 2119029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2118354-2118546:-1:exon

position:2118354:-1
position: 2118354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2118546:-1
position: 2118546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2116888-2117420:-1:exon

position:2117420:-1
position: 2117420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113590041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113590041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NSA2 homolog
translation: MPQNEHIELHRKRHGYRLDHHERKRKKESREAHERSHKAKKLIGLKAKLYHKQRHAEKIQMKKTIKMHEQRRTKQKDDDKTPDGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPVPKVRAQGETEVLKVVRTGKRQKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV
SIO_010081: LOC113590041
subclass of: SO_0000673
so part of: LOC113590041
location: complement(join(2117353..2117420,2118354..2118546,2118850..2119029,2119208..2119358,2119757..2119944,2121326..2121328))
location: region:2117353-2121328:-1
so has part: feature:2121326-2121328:-1:exon
so has part: feature:2119757-2119944:-1:exon
so has part: feature:2119208-2119358:-1:exon
so has part: feature:2118850-2119029:-1:exon
so has part: feature:2118354-2118546:-1:exon
so has part: feature:2117353-2117420:-1:exon

XP_026885795.1
type: Protein
SIO_000068: ncbiprotein

position:2117353:-1
position: 2117353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121328:-1
position: 2121328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2121326-2121328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2119757-2119944:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2119208-2119358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2118850-2119029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2118354-2118546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2117353-2117420:-1:exon

spout1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: spout1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2121677..2125836
location: region:2121677-2125836:1
so has part: feature:2121677-2125836:1:exon
subclass of: SO_0000010

113590037
type: Gene
SIO_000068: ncbigene

position:2121677:1
position: 2121677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125836:1
position: 2125836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2121677-2125836:1:exon

spout1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: spout1
product: SPOUT domain containing methyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027029986.2
SIO_010081: spout1
subclass of: SO_0000673
so part of: spout1
location: join(2121677..2121769,2121978..2122017,2122511..2122630,2122927..2123086,2123216..2123305,2123630..2123679,2123777..2123907,2124244..2124313,2124484..2124582,2124823..2124925,2125068..2125215,2125744..2125836)
location: region:2121677-2125836:1
so has part: feature:2121677-2121769:1:exon
so has part: feature:2121978-2122017:1:exon
so has part: feature:2122511-2122630:1:exon
so has part: feature:2122927-2123086:1:exon
so has part: feature:2123216-2123305:1:exon
so has part: feature:2123630-2123679:1:exon
so has part: feature:2123777-2123907:1:exon
so has part: feature:2124244-2124313:1:exon
so has part: feature:2124484-2124582:1:exon
so has part: feature:2124823-2124925:1:exon
so has part: feature:2125068-2125215:1:exon
so has part: feature:2125744-2125836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2121677-2121769:1:exon

position:2121769:1
position: 2121769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2121978-2122017:1:exon

position:2121978:1
position: 2121978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122017:1
position: 2122017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2122511-2122630:1:exon

position:2122511:1
position: 2122511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122630:1
position: 2122630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2122927-2123086:1:exon

position:2122927:1
position: 2122927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123086:1
position: 2123086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2123216-2123305:1:exon

position:2123216:1
position: 2123216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123305:1
position: 2123305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2123630-2123679:1:exon

position:2123630:1
position: 2123630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123679:1
position: 2123679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2123777-2123907:1:exon

position:2123777:1
position: 2123777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123907:1
position: 2123907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2124244-2124313:1:exon

position:2124244:1
position: 2124244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124313:1
position: 2124313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2124484-2124582:1:exon

position:2124484:1
position: 2124484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124582:1
position: 2124582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2124823-2124925:1:exon

position:2124823:1
position: 2124823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124925:1
position: 2124925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2125068-2125215:1:exon

position:2125068:1
position: 2125068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125215:1
position: 2125215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2125744-2125836:1:exon

position:2125744:1
position: 2125744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

spout1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: spout1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative methyltransferase C9orf114 homolog
translation: MSGSPAAKKSKLSLRETEGKIDWRRRKAQKKEQKKRWKEDKLIRQLEKRSRVVEVEEGRAKVEQQMEAKGRQYTLSIALPGSVLDNAQSPELRTYLAGQVARACAVFCVDEVVVFDESGEDARTVEGEFKGIGKKGQACVQLARILQYLECPQYLRKAFFPKHHDLQFAGLLNPLDSPHHMRMDEEVEFREGVVVDRPCKAGNGSFVNCGMRKEVQVDKQLQPGLRVTVRIKSQNTESRVHKGVVVAPHVPRTEGGLYWGYSVRLASCLSAVITECPFKDGYDLTIGTSEKGNNADHAHLPPFRHTLVVFGGLQGLEASVDADVNLDVTDPGALFDLYLNTCPTQGSRTIRTEEAILISLSSLRQKIAAVFSEQTQ
SIO_010081: spout1
subclass of: SO_0000673
so part of: spout1
location: join(2121722..2121769,2121978..2122017,2122511..2122630,2122927..2123086,2123216..2123305,2123630..2123679,2123777..2123907,2124244..2124313,2124484..2124582,2124823..2124925,2125068..2125215,2125744..2125815)
location: region:2121722-2125815:1
so has part: feature:2121722-2121769:1:exon
so has part: feature:2121978-2122017:1:exon
so has part: feature:2122511-2122630:1:exon
so has part: feature:2122927-2123086:1:exon
so has part: feature:2123216-2123305:1:exon
so has part: feature:2123630-2123679:1:exon
so has part: feature:2123777-2123907:1:exon
so has part: feature:2124244-2124313:1:exon
so has part: feature:2124484-2124582:1:exon
so has part: feature:2124823-2124925:1:exon
so has part: feature:2125068-2125215:1:exon
so has part: feature:2125744-2125815:1:exon

XP_026885787.1
type: Protein
SIO_000068: ncbiprotein

position:2121722:1
position: 2121722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125815:1
position: 2125815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2121722-2121769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2121978-2122017:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2122511-2122630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2122927-2123086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2123216-2123305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2123630-2123679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2123777-2123907:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2124244-2124313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2124484-2124582:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2124823-2124925:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2125068-2125215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2125744-2125815:1:exon

st6galnac6
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: st6galnac6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2125915..2137560)
location: region:2125915-2137560:-1
so has part: feature:2125915-2137560:-1:exon
subclass of: SO_0000010

113590038
type: Gene
SIO_000068: ncbigene

position:2125915:-1
position: 2125915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2137560:-1
position: 2137560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2125915-2137560:-1:exon

st6galnac6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: st6galnac6
product: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027029988.2
SIO_010081: st6galnac6
subclass of: SO_0000673
so part of: st6galnac6
location: complement(join(2125915..2125995,2129000..2129182,2129436..2129543,2130281..2130690,2135758..2135952,2136426..2136487,2137302..2137560))
location: region:2125915-2137560:-1
so has part: feature:2137302-2137560:-1:exon
so has part: feature:2136426-2136487:-1:exon
so has part: feature:2135758-2135952:-1:exon
so has part: feature:2130281-2130690:-1:exon
so has part: feature:2129436-2129543:-1:exon
so has part: feature:2129000-2129182:-1:exon
so has part: feature:2125915-2125995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2137302-2137560:-1:exon

position:2137302:-1
position: 2137302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2136426-2136487:-1:exon

position:2136426:-1
position: 2136426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2136487:-1
position: 2136487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2135758-2135952:-1:exon

position:2135758:-1
position: 2135758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135952:-1
position: 2135952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2130281-2130690:-1:exon

position:2130281:-1
position: 2130281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2130690:-1
position: 2130690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2129436-2129543:-1:exon

position:2129436:-1
position: 2129436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129543:-1
position: 2129543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2129000-2129182:-1:exon

position:2129000:-1
position: 2129000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129182:-1
position: 2129182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2125915-2125995:-1:exon

position:2125995:-1
position: 2125995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

st6galnac6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: st6galnac6
product: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027029989.2
SIO_010081: st6galnac6
subclass of: SO_0000673
so part of: st6galnac6
location: complement(join(2125915..2125995,2129000..2129182,2129436..2129543,2130281..2130690,2135758..2135952,2136426..2136487,2136873..2137292))
location: region:2125915-2137292:-1
so has part: feature:2136873-2137292:-1:exon
so has part: feature:2136426-2136487:-1:exon
so has part: feature:2135758-2135952:-1:exon
so has part: feature:2130281-2130690:-1:exon
so has part: feature:2129436-2129543:-1:exon
so has part: feature:2129000-2129182:-1:exon
so has part: feature:2125915-2125995:-1:exon

position:2137292:-1
position: 2137292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2136873-2137292:-1:exon

position:2136873:-1
position: 2136873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2136426-2136487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2135758-2135952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2130281-2130690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2129436-2129543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2129000-2129182:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2125915-2125995:-1:exon

st6galnac6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: st6galnac6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1
translation: MALRFAEKGHHSQRMAIFGAVFIITTLLILYSSNSGNELYGSLRVGTFSETIRNTNLKKWAGKEGYIPVYGNKSMTLHCHRCALVTSSSHILGSGAGEEIDRSECVIRMNDAPTSGFQPDVGTRTSLRVVAHSSVFRVVRKPQEFLNRSESLSVIFWGPPTKMGRDAKGPLFRLIQRVSATYSNVSSFTISPGKMRKFDALFQKETGRDRQKSQSWLSTGWFTMVIAIEICDNIKVYGMVPPNYCGRRPQPKRMPYHYYKPRGPDECVTYLQNEKGRRGNHHRFITEKQVFARWAKLYNITFAHPTWVGGIVAEIL
SIO_010081: st6galnac6
subclass of: SO_0000673
so part of: st6galnac6
location: complement(join(2125965..2125995,2129000..2129182,2129436..2129543,2130281..2130690,2135758..2135952,2136426..2136449))
location: region:2125965-2136449:-1
so has part: feature:2136426-2136449:-1:exon
so has part: feature:2135758-2135952:-1:exon
so has part: feature:2130281-2130690:-1:exon
so has part: feature:2129436-2129543:-1:exon
so has part: feature:2129000-2129182:-1:exon
so has part: feature:2125965-2125995:-1:exon

XP_026885789.2
type: Protein
SIO_000068: ncbiprotein

position:2125965:-1
position: 2125965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2136449:-1
position: 2136449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2136426-2136449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2135758-2135952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130281-2130690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2129436-2129543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2129000-2129182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2125965-2125995:-1:exon

st6galnac6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: st6galnac6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1
translation: MALRFAEKGHHSQRMAIFGAVFIITTLLILYSSNSGNELYGSLRVGTFSETIRNTNLKKWAGKEGYIPVYGNKSMTLHCHRCALVTSSSHILGSGAGEEIDRSECVIRMNDAPTSGFQPDVGTRTSLRVVAHSSVFRVVRKPQEFLNRSESLSVIFWGPPTKMGRDAKGPLFRLIQRVSATYSNVSSFTISPGKMRKFDALFQKETGRDRQKSQSWLSTGWFTMVIAIEICDNIKVYGMVPPNYCGRRPQPKRMPYHYYKPRGPDECVTYLQNEKGRRGNHHRFITEKQVFARWAKLYNITFAHPTWVGGIVAEIL
SIO_010081: st6galnac6
subclass of: SO_0000673
so part of: st6galnac6
location: complement(join(2125965..2125995,2129000..2129182,2129436..2129543,2130281..2130690,2135758..2135952,2136426..2136449))
location: region:2125965-2136449:-1
so has part: feature:2136426-2136449:-1:exon
so has part: feature:2135758-2135952:-1:exon
so has part: feature:2130281-2130690:-1:exon
so has part: feature:2129436-2129543:-1:exon
so has part: feature:2129000-2129182:-1:exon
so has part: feature:2125965-2125995:-1:exon

XP_026885790.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2136426-2136449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2135758-2135952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130281-2130690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2129436-2129543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2129000-2129182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2125965-2125995:-1:exon

st6galnac6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: st6galnac6
product: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027029990.2
SIO_010081: st6galnac6
subclass of: SO_0000673
so part of: st6galnac6
location: complement(join(2128577..2129182,2129436..2129543,2130281..2130690,2135758..2135952,2136426..2136487,2137302..2137557))
location: region:2128577-2137557:-1
so has part: feature:2137302-2137557:-1:exon
so has part: feature:2136426-2136487:-1:exon
so has part: feature:2135758-2135952:-1:exon
so has part: feature:2130281-2130690:-1:exon
so has part: feature:2129436-2129543:-1:exon
so has part: feature:2128577-2129182:-1:exon

position:2128577:-1
position: 2128577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2137557:-1
position: 2137557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2137302-2137557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136426-2136487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2135758-2135952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2130281-2130690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2129436-2129543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2128577-2129182:-1:exon

st6galnac6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: st6galnac6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X2
translation: MALRFAEKGHHSQRMAIFGAVFIITTLLILYSSNSGNELYGSLRVGTFSETIRNTNLKKWAGKEGYIPVYGNKSMTLHCHRCALVTSSSHILGSGAGEEIDRSECVIRMNDAPTSGFQPDVGTRTSLRVVAHSSVFRVVRKPQEFLNRSESLSVIFWGPPTKMGRDAKGPLFRLIQRVSATYSNVSSFTISPGKMRKFDALFQKETGRDRQKSQSWLSTGWFTMVIAIEICDNIKVYGMVPPNYCGRRPQPKRMPYHYYKPRGPDECVTYLQNEKGRRGNHHRFITEKQVFARWAKLYNITFAHPTW
SIO_010081: st6galnac6
subclass of: SO_0000673
so part of: st6galnac6
location: complement(join(2128996..2129182,2129436..2129543,2130281..2130690,2135758..2135952,2136426..2136449))
location: region:2128996-2136449:-1
so has part: feature:2136426-2136449:-1:exon
so has part: feature:2135758-2135952:-1:exon
so has part: feature:2130281-2130690:-1:exon
so has part: feature:2129436-2129543:-1:exon
so has part: feature:2128996-2129182:-1:exon

XP_026885791.2
type: Protein
SIO_000068: ncbiprotein

position:2128996:-1
position: 2128996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2136426-2136449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2135758-2135952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130281-2130690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2129436-2129543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2128996-2129182:-1:exon

st6galnac4
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: st6galnac4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2139748..2142845)
location: region:2139748-2142845:-1
so has part: feature:2139748-2142845:-1:exon
subclass of: SO_0000010

113590039
type: Gene
SIO_000068: ncbigene

position:2139748:-1
position: 2139748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2142845:-1
position: 2142845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139748-2142845:-1:exon

st6galnac4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: st6galnac4
product: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027029991.2
SIO_010081: st6galnac4
subclass of: SO_0000673
so part of: st6galnac4
location: complement(join(2139748..2140471,2140826..2140933,2141316..2141725,2141936..2142076,2142319..2142845))
location: region:2139748-2142845:-1
so has part: feature:2142319-2142845:-1:exon
so has part: feature:2141936-2142076:-1:exon
so has part: feature:2141316-2141725:-1:exon
so has part: feature:2140826-2140933:-1:exon
so has part: feature:2139748-2140471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2142319-2142845:-1:exon

position:2142319:-1
position: 2142319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2141936-2142076:-1:exon

position:2141936:-1
position: 2141936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2142076:-1
position: 2142076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2141316-2141725:-1:exon

position:2141316:-1
position: 2141316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141725:-1
position: 2141725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2140826-2140933:-1:exon

position:2140826:-1
position: 2140826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140933:-1
position: 2140933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2139748-2140471:-1:exon

position:2140471:-1
position: 2140471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

st6galnac4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: st6galnac4
product: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027029992.2
SIO_010081: st6galnac4
subclass of: SO_0000673
so part of: st6galnac4
location: complement(join(2139748..2140471,2140826..2140933,2141316..2141725,2141936..2142076,2142203..2142845))
location: region:2139748-2142845:-1
so has part: feature:2142203-2142845:-1:exon
so has part: feature:2141936-2142076:-1:exon
so has part: feature:2141316-2141725:-1:exon
so has part: feature:2140826-2140933:-1:exon
so has part: feature:2139748-2140471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2142203-2142845:-1:exon

position:2142203:-1
position: 2142203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2141936-2142076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2141316-2141725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2140826-2140933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139748-2140471:-1:exon

st6galnac4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: st6galnac4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1
translation: MDMKSLKLRWLLAFVIFGVVLWCIRLLRSGGGTGNLGLRGYLRIQPTGTSGSQSLTLRCGTCAVVSSSGHMRGSGCGSKINAHECVIRMNAAPTQGFEADVGNRTSVRMVSHTSVPHLLRGEPLFFGHDADTRYVVWGPERNMRQDGKGQVFNALAALARRHPPAHLYAVSREKVLYCDRVFQEETGKDRMKSGAFLSTGFFTLILALEVCDSVDVYGMMDGSYCSLANHSSVPYHYYEMYHLDECAMYRLHELAQRGGHRFITEKHIYRRWALQGKLHFPYPTWVRQQQS
SIO_010081: st6galnac4
subclass of: SO_0000673
so part of: st6galnac4
location: complement(join(2140273..2140471,2140826..2140933,2141316..2141725,2141936..2142076,2142319..2142336))
location: region:2140273-2142336:-1
so has part: feature:2142319-2142336:-1:exon
so has part: feature:2141936-2142076:-1:exon
so has part: feature:2141316-2141725:-1:exon
so has part: feature:2140826-2140933:-1:exon
so has part: feature:2140273-2140471:-1:exon

XP_026885792.2
type: Protein
SIO_000068: ncbiprotein

position:2140273:-1
position: 2140273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2142336:-1
position: 2142336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2142319-2142336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2141936-2142076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2141316-2141725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2140826-2140933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2140273-2140471:-1:exon

st6galnac4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: st6galnac4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2
translation: MSILKLRWLLAFVIFGVVLWCIRLLRSGGGTGNLGLRGYLRIQPTGTSGSQSLTLRCGTCAVVSSSGHMRGSGCGSKINAHECVIRMNAAPTQGFEADVGNRTSVRMVSHTSVPHLLRGEPLFFGHDADTRYVVWGPERNMRQDGKGQVFNALAALARRHPPAHLYAVSREKVLYCDRVFQEETGKDRMKSGAFLSTGFFTLILALEVCDSVDVYGMMDGSYCSLANHSSVPYHYYEMYHLDECAMYRLHELAQRGGHRFITEKHIYRRWALQGKLHFPYPTWVRQQQS
SIO_010081: st6galnac4
subclass of: SO_0000673
so part of: st6galnac4
location: complement(join(2140273..2140471,2140826..2140933,2141316..2141725,2141936..2142076,2142203..2142214))
location: region:2140273-2142214:-1
so has part: feature:2142203-2142214:-1:exon
so has part: feature:2141936-2142076:-1:exon
so has part: feature:2141316-2141725:-1:exon
so has part: feature:2140826-2140933:-1:exon
so has part: feature:2140273-2140471:-1:exon

XP_026885793.2
type: Protein
SIO_000068: ncbiprotein

position:2142214:-1
position: 2142214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2142203-2142214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2141936-2142076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2141316-2141725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2140826-2140933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2140273-2140471:-1:exon

miga2
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: miga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2143018..2155304
location: region:2143018-2155304:1
so has part: feature:2143018-2155304:1:exon
subclass of: SO_0000010

113590046
type: Gene
SIO_000068: ncbigene

position:2143018:1
position: 2143018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2155304:1
position: 2155304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2143018-2155304:1:exon

miga2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: miga2
product: mitoguardin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035521425.1
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2143018..2143099,2143876..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150866,2151641..2151728)
location: region:2143018-2151728:1
so has part: feature:2143018-2143099:1:exon
so has part: feature:2143876-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150866:1:exon
so has part: feature:2151641-2151728:1:exon

position:2151728:1
position: 2151728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2143018-2143099:1:exon

position:2143099:1
position: 2143099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2143876-2144193:1:exon

position:2143876:1
position: 2143876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2144193:1
position: 2144193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2145560-2145770:1:exon

position:2145560:1
position: 2145560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2145770:1
position: 2145770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2145934-2146040:1:exon

position:2145934:1
position: 2145934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2146040:1
position: 2146040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2146144-2146264:1:exon

position:2146144:1
position: 2146144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2146264:1
position: 2146264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2146682-2146800:1:exon

position:2146682:1
position: 2146682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2146800:1
position: 2146800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2146973-2147090:1:exon

position:2146973:1
position: 2146973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147090:1
position: 2147090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2147210-2147316:1:exon

position:2147210:1
position: 2147210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147316:1
position: 2147316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2148195-2148307:1:exon

position:2148195:1
position: 2148195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2148307:1
position: 2148307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2148849-2148921:1:exon

position:2148849:1
position: 2148849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2148921:1
position: 2148921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2149183-2149269:1:exon

position:2149183:1
position: 2149183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2149269:1
position: 2149269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2149426-2149524:1:exon

position:2149426:1
position: 2149426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2149524:1
position: 2149524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2149987-2150121:1:exon

position:2149987:1
position: 2149987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150121:1
position: 2150121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2150325-2150866:1:exon

position:2150325:1
position: 2150325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150866:1
position: 2150866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2151641-2151728:1:exon

position:2151641:1
position: 2151641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

miga2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: miga2
product: mitoguardin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027030001.2
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2143030..2143548,2143876..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150378,2150750..2150866,2151641..2155304)
location: region:2143030-2155304:1
so has part: feature:2143030-2143548:1:exon
so has part: feature:2143876-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150378:1:exon
so has part: feature:2150750-2150866:1:exon
so has part: feature:2151641-2155304:1:exon

position:2143030:1
position: 2143030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2143030-2143548:1:exon

position:2143548:1
position: 2143548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2143876-2144193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2150325-2150378:1:exon

position:2150378:1
position: 2150378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2150750-2150866:1:exon

position:2150750:1
position: 2150750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2151641-2155304:1:exon

miga2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: miga2
product: mitoguardin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035521423.1
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2143030..2143548,2143876..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150866,2151641..2151728)
location: region:2143030-2151728:1
so has part: feature:2143030-2143548:1:exon
so has part: feature:2143876-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150866:1:exon
so has part: feature:2151641-2151728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2143030-2143548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2143876-2144193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2150325-2150866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2151641-2151728:1:exon

miga2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: miga2
product: mitoguardin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035521424.1
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2143030..2143343,2143876..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150866,2151641..2151728)
location: region:2143030-2151728:1
so has part: feature:2143030-2143343:1:exon
so has part: feature:2143876-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150866:1:exon
so has part: feature:2151641-2151728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2143030-2143343:1:exon

position:2143343:1
position: 2143343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2143876-2144193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2150325-2150866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2151641-2151728:1:exon

miga2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: miga2
product: mitoguardin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035521426.1
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2143598..2143732,2143876..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150866,2151641..2151728)
location: region:2143598-2151728:1
so has part: feature:2143598-2143732:1:exon
so has part: feature:2143876-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150866:1:exon
so has part: feature:2151641-2151728:1:exon

position:2143598:1
position: 2143598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2143598-2143732:1:exon

position:2143732:1
position: 2143732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2143876-2144193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2150325-2150866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2151641-2151728:1:exon

miga2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: miga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitoguardin 2 isoform X2
translation: MSVSRAESMSIVQALAMTVAEIPVFLYSTFGQSIFSQLRLSPSLKKVLFATALGSVALALTAHHLKRRGRKRKQVADKSEPKPGGVPEQLLLRAGRPASLKKGPYLGRQVVGPGTASSDVMSGISLAASKHSSHSITSARLPPSPNQSASGGGPWEAEPVSGEAGVIEDTDAENLYLMGMELFEEALQKWEQALNIRHQARSGASASNSLAQQGVSHMPEGRNRKLAEKLECLLHRAYHLQEDFGTSIPPESLLTELESEGTLILPTVGSSRRPQDDDATTITSDNSFFSAAELFDVFPEDEVYQPIKSAALYEEASSLVRDGKIACRTLRTDLLECYSDQDFLAKLHCVRQAFYVLLLDETHRAFFMETGKQMITGLMIKAGKSPKAFLESYRDMLLYTQREETWPITKMELEGRGVVCMNFFDIVLDFILMDAFEDLEYPPTSVVAVLRNRWLSDSFKETALATACWSVLKAKRRLLMVPDGFISHFYTISEHVSPVLAFGFLGPRLHLTEVCTTFKLQIVQYLKDMFDQDKVRFTSAQSLAEDILSLSHRRADILLGYLGANSLPETNGVALSSPCQADDAPRLPTGQED
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2144098..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150378,2150750..2150866,2151641..2151865)
location: region:2144098-2151865:1
so has part: feature:2144098-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150378:1:exon
so has part: feature:2150750-2150866:1:exon
so has part: feature:2151641-2151865:1:exon

XP_026885802.2
type: Protein
SIO_000068: ncbiprotein

position:2144098:1
position: 2144098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2151865:1
position: 2151865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144098-2144193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2150325-2150378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2150750-2150866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2151641-2151865:1:exon

miga2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: miga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitoguardin 2 isoform X1
translation: MSVSRAESMSIVQALAMTVAEIPVFLYSTFGQSIFSQLRLSPSLKKVLFATALGSVALALTAHHLKRRGRKRKQVADKSEPKPGGVPEQLLLRAGRPASLKKGPYLGRQVVGPGTASSDVMSGISLAASKHSSHSITSARLPPSPNQSASGGGPWEAEPVSGEAGVIEDTDAENLYLMGMELFEEALQKWEQALNIRHQARSGASASNSLAQQGVSHMPEGRNRKLAEKLECLLHRAYHLQEDFGTSIPPESLLTELESEGTLILPTVGSSRRPQDDDATTITSDNSFFSAAELFDVFPEDEVYQPIKSAALYEEASSLVRDGKIACRTLRTDLLECYSDQDFLAKLHCVRQAFYVLLLDETHRAFFMETGKQMITGLMIKAGKSPKAFLESYRDMLLYTQREETWPITKMELEGRGVVCMNFFDIVLDFILMDAFEDLEYPPTSVVAVLRNRWLSDSFKETALATACWSVLKAKRRLLMVRFCKSSYIHCVVTSVIKTHTLAGFPSRHSGGPKPVHSEIAHCSKIAGRKKRACYCSSVVVSCSPRCSSVLVFVIHITDHFYNSTCVCVCVCVCVYVCTRTYPRIIVLRRQMVSHVSHSCASLRFQTGSYPISTPSRSTSVPCWRSASWGPGCT
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2144098..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150843)
location: region:2144098-2150843:1
so has part: feature:2144098-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150843:1:exon

XP_035377316.1
type: Protein
SIO_000068: ncbiprotein

position:2150843:1
position: 2150843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144098-2144193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2150325-2150843:1:exon

miga2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: miga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitoguardin 2 isoform X1
translation: MSVSRAESMSIVQALAMTVAEIPVFLYSTFGQSIFSQLRLSPSLKKVLFATALGSVALALTAHHLKRRGRKRKQVADKSEPKPGGVPEQLLLRAGRPASLKKGPYLGRQVVGPGTASSDVMSGISLAASKHSSHSITSARLPPSPNQSASGGGPWEAEPVSGEAGVIEDTDAENLYLMGMELFEEALQKWEQALNIRHQARSGASASNSLAQQGVSHMPEGRNRKLAEKLECLLHRAYHLQEDFGTSIPPESLLTELESEGTLILPTVGSSRRPQDDDATTITSDNSFFSAAELFDVFPEDEVYQPIKSAALYEEASSLVRDGKIACRTLRTDLLECYSDQDFLAKLHCVRQAFYVLLLDETHRAFFMETGKQMITGLMIKAGKSPKAFLESYRDMLLYTQREETWPITKMELEGRGVVCMNFFDIVLDFILMDAFEDLEYPPTSVVAVLRNRWLSDSFKETALATACWSVLKAKRRLLMVRFCKSSYIHCVVTSVIKTHTLAGFPSRHSGGPKPVHSEIAHCSKIAGRKKRACYCSSVVVSCSPRCSSVLVFVIHITDHFYNSTCVCVCVCVCVYVCTRTYPRIIVLRRQMVSHVSHSCASLRFQTGSYPISTPSRSTSVPCWRSASWGPGCT
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2144098..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150843)
location: region:2144098-2150843:1
so has part: feature:2144098-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150843:1:exon

XP_035377317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2144098-2144193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2150325-2150843:1:exon

miga2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: miga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitoguardin 2 isoform X1
translation: MSVSRAESMSIVQALAMTVAEIPVFLYSTFGQSIFSQLRLSPSLKKVLFATALGSVALALTAHHLKRRGRKRKQVADKSEPKPGGVPEQLLLRAGRPASLKKGPYLGRQVVGPGTASSDVMSGISLAASKHSSHSITSARLPPSPNQSASGGGPWEAEPVSGEAGVIEDTDAENLYLMGMELFEEALQKWEQALNIRHQARSGASASNSLAQQGVSHMPEGRNRKLAEKLECLLHRAYHLQEDFGTSIPPESLLTELESEGTLILPTVGSSRRPQDDDATTITSDNSFFSAAELFDVFPEDEVYQPIKSAALYEEASSLVRDGKIACRTLRTDLLECYSDQDFLAKLHCVRQAFYVLLLDETHRAFFMETGKQMITGLMIKAGKSPKAFLESYRDMLLYTQREETWPITKMELEGRGVVCMNFFDIVLDFILMDAFEDLEYPPTSVVAVLRNRWLSDSFKETALATACWSVLKAKRRLLMVRFCKSSYIHCVVTSVIKTHTLAGFPSRHSGGPKPVHSEIAHCSKIAGRKKRACYCSSVVVSCSPRCSSVLVFVIHITDHFYNSTCVCVCVCVCVYVCTRTYPRIIVLRRQMVSHVSHSCASLRFQTGSYPISTPSRSTSVPCWRSASWGPGCT
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2144098..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150843)
location: region:2144098-2150843:1
so has part: feature:2144098-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150843:1:exon

XP_035377318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2144098-2144193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2150325-2150843:1:exon

miga2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: miga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitoguardin 2 isoform X1
translation: MSVSRAESMSIVQALAMTVAEIPVFLYSTFGQSIFSQLRLSPSLKKVLFATALGSVALALTAHHLKRRGRKRKQVADKSEPKPGGVPEQLLLRAGRPASLKKGPYLGRQVVGPGTASSDVMSGISLAASKHSSHSITSARLPPSPNQSASGGGPWEAEPVSGEAGVIEDTDAENLYLMGMELFEEALQKWEQALNIRHQARSGASASNSLAQQGVSHMPEGRNRKLAEKLECLLHRAYHLQEDFGTSIPPESLLTELESEGTLILPTVGSSRRPQDDDATTITSDNSFFSAAELFDVFPEDEVYQPIKSAALYEEASSLVRDGKIACRTLRTDLLECYSDQDFLAKLHCVRQAFYVLLLDETHRAFFMETGKQMITGLMIKAGKSPKAFLESYRDMLLYTQREETWPITKMELEGRGVVCMNFFDIVLDFILMDAFEDLEYPPTSVVAVLRNRWLSDSFKETALATACWSVLKAKRRLLMVRFCKSSYIHCVVTSVIKTHTLAGFPSRHSGGPKPVHSEIAHCSKIAGRKKRACYCSSVVVSCSPRCSSVLVFVIHITDHFYNSTCVCVCVCVCVYVCTRTYPRIIVLRRQMVSHVSHSCASLRFQTGSYPISTPSRSTSVPCWRSASWGPGCT
SIO_010081: miga2
subclass of: SO_0000673
so part of: miga2
location: join(2144098..2144193,2145560..2145770,2145934..2146040,2146144..2146264,2146682..2146800,2146973..2147090,2147210..2147316,2148195..2148307,2148849..2148921,2149183..2149269,2149426..2149524,2149987..2150121,2150325..2150843)
location: region:2144098-2150843:1
so has part: feature:2144098-2144193:1:exon
so has part: feature:2145560-2145770:1:exon
so has part: feature:2145934-2146040:1:exon
so has part: feature:2146144-2146264:1:exon
so has part: feature:2146682-2146800:1:exon
so has part: feature:2146973-2147090:1:exon
so has part: feature:2147210-2147316:1:exon
so has part: feature:2148195-2148307:1:exon
so has part: feature:2148849-2148921:1:exon
so has part: feature:2149183-2149269:1:exon
so has part: feature:2149426-2149524:1:exon
so has part: feature:2149987-2150121:1:exon
so has part: feature:2150325-2150843:1:exon

XP_035377319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2144098-2144193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145560-2145770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145934-2146040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2146144-2146264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2146682-2146800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146973-2147090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2147210-2147316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2148195-2148307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2148849-2148921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2149183-2149269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2149426-2149524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2149987-2150121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2150325-2150843:1:exon

dolpp1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: dolpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2156542..2164872
location: region:2156542-2164872:1
so has part: feature:2156542-2164872:1:exon
subclass of: SO_0000010

113590034
type: Gene
SIO_000068: ncbigene

position:2156542:1
position: 2156542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2164872:1
position: 2164872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2156542-2164872:1:exon

dolpp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: dolpp1
product: dolichyldiphosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027029983.2
SIO_010081: dolpp1
subclass of: SO_0000673
so part of: dolpp1
location: join(2156542..2156691,2160244..2160344,2160805..2160889,2161474..2161573,2161672..2161770,2161859..2161987,2162090..2162179,2162271..2164872)
location: region:2156542-2164872:1
so has part: feature:2156542-2156691:1:exon
so has part: feature:2160244-2160344:1:exon
so has part: feature:2160805-2160889:1:exon
so has part: feature:2161474-2161573:1:exon
so has part: feature:2161672-2161770:1:exon
so has part: feature:2161859-2161987:1:exon
so has part: feature:2162090-2162179:1:exon
so has part: feature:2162271-2164872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2156542-2156691:1:exon

position:2156691:1
position: 2156691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2160244-2160344:1:exon

position:2160244:1
position: 2160244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160344:1
position: 2160344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2160805-2160889:1:exon

position:2160805:1
position: 2160805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160889:1
position: 2160889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2161474-2161573:1:exon

position:2161474:1
position: 2161474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161573:1
position: 2161573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2161672-2161770:1:exon

position:2161672:1
position: 2161672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161770:1
position: 2161770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2161859-2161987:1:exon

position:2161859:1
position: 2161859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161987:1
position: 2161987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2162090-2162179:1:exon

position:2162090:1
position: 2162090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162179:1
position: 2162179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2162271-2164872:1:exon

position:2162271:1
position: 2162271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dolpp1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8005
gene: dolpp1
product: dolichyldiphosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004775495.1
SIO_010081: dolpp1
so part of: dolpp1
location: join(2156542..2156691,2160244..2160344,2160805..2160889,2161474..2161573,2161672..2161770,2161859..2161987,2162090..2162179,2162271..2163434,2163543..2164872)
location: region:2156542-2164872:1
so has part: feature:2156542-2156691:1:exon
so has part: feature:2160244-2160344:1:exon
so has part: feature:2160805-2160889:1:exon
so has part: feature:2161474-2161573:1:exon
so has part: feature:2161672-2161770:1:exon
so has part: feature:2161859-2161987:1:exon
so has part: feature:2162090-2162179:1:exon
so has part: feature:2162271-2163434:1:exon
so has part: feature:2163543-2164872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2156542-2156691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2160244-2160344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2160805-2160889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2161474-2161573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2161672-2161770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2161859-2161987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2162090-2162179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2162271-2163434:1:exon

position:2163434:1
position: 2163434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2163543-2164872:1:exon

position:2163543:1
position: 2163543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dolpp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: dolpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyldiphosphatase 1
translation: MLDARCPGKMASGEQCSAPPRWQSISLTHVEYPTGDLTGQILAYSSLLPMAILVGFVTLIVFKRELHTISFFGGLVINEGLNWVLKHIVQEPRPCGGEHSAVTTEYGMPSSHSQFIWFFIVYFLLFLYLRMHQTNNARCVELLWRHVLSVILLGVALSVSYSRVYLLYHTWRQVVYGGVAGMVVGVVWFFITQEVLTPIFPKIAAWPISEFFLIRDTSLIPNILWFEYTVTRSEARNRQRKLGTKLQ
SIO_010081: dolpp1
subclass of: SO_0000673
so part of: dolpp1
location: join(2156589..2156691,2160244..2160344,2160805..2160889,2161474..2161573,2161672..2161770,2161859..2161987,2162090..2162179,2162271..2162307)
location: region:2156589-2162307:1
so has part: feature:2156589-2156691:1:exon
so has part: feature:2160244-2160344:1:exon
so has part: feature:2160805-2160889:1:exon
so has part: feature:2161474-2161573:1:exon
so has part: feature:2161672-2161770:1:exon
so has part: feature:2161859-2161987:1:exon
so has part: feature:2162090-2162179:1:exon
so has part: feature:2162271-2162307:1:exon

XP_026885784.2
type: Protein
SIO_000068: ncbiprotein

position:2156589:1
position: 2156589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162307:1
position: 2162307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2156589-2156691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2160244-2160344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2160805-2160889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2161474-2161573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2161672-2161770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2161859-2161987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2162090-2162179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2162271-2162307:1:exon

setx
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: setx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2168694..2188103
location: region:2168694-2188103:1
so has part: feature:2168694-2188103:1:exon
subclass of: SO_0000010

113590047
type: Gene
SIO_000068: ncbigene

position:2168694:1
position: 2168694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188103:1
position: 2188103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2168694-2188103:1:exon

setx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: setx
product: senataxin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035521387.1
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2168694..2168805,2170452..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176018..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186790..2186885,2186970..2187057,2187164..2188103)
location: region:2168694-2188103:1
so has part: feature:2168694-2168805:1:exon
so has part: feature:2170452-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176018-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186790-2186885:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2188103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2168694-2168805:1:exon

position:2168805:1
position: 2168805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2170452-2170640:1:exon

position:2170452:1
position: 2170452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2170640:1
position: 2170640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2172230-2172437:1:exon

position:2172230:1
position: 2172230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172437:1
position: 2172437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2172864-2172973:1:exon

position:2172864:1
position: 2172864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172973:1
position: 2172973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2174564-2174777:1:exon

position:2174564:1
position: 2174564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174777:1
position: 2174777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2175108-2175227:1:exon

position:2175108:1
position: 2175108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2175227:1
position: 2175227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2176018-2176192:1:exon

position:2176018:1
position: 2176018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176192:1
position: 2176192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2176347-2176440:1:exon

position:2176347:1
position: 2176347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176440:1
position: 2176440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2177023-2180634:1:exon

position:2177023:1
position: 2177023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180634:1
position: 2180634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2180780-2180876:1:exon

position:2180780:1
position: 2180780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180876:1
position: 2180876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2181000-2181173:1:exon

position:2181000:1
position: 2181000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2181173:1
position: 2181173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2181485-2181708:1:exon

position:2181485:1
position: 2181485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2181708:1
position: 2181708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2181992-2182174:1:exon

position:2181992:1
position: 2181992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2182174:1
position: 2182174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2182801-2182942:1:exon

position:2182801:1
position: 2182801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2182942:1
position: 2182942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2183390-2183491:1:exon

position:2183390:1
position: 2183390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2183491:1
position: 2183491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2183698-2183810:1:exon

position:2183698:1
position: 2183698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2183810:1
position: 2183810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2184319-2184390:1:exon

position:2184319:1
position: 2184319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184390:1
position: 2184390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2184803-2184952:1:exon

position:2184803:1
position: 2184803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184952:1
position: 2184952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2185057-2185164:1:exon

position:2185057:1
position: 2185057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185164:1
position: 2185164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2185418-2185584:1:exon

position:2185418:1
position: 2185418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185584:1
position: 2185584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2185824-2185916:1:exon

position:2185824:1
position: 2185824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185916:1
position: 2185916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2186486-2186635:1:exon

position:2186486:1
position: 2186486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186635:1
position: 2186635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2186790-2186885:1:exon

position:2186790:1
position: 2186790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186885:1
position: 2186885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2186970-2187057:1:exon

position:2186970:1
position: 2186970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2187057:1
position: 2187057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2187164-2188103:1:exon

position:2187164:1
position: 2187164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

setx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: setx
product: senataxin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035521390.1
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2168694..2168805,2170452..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176018..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186970..2187057,2187164..2188103)
location: region:2168694-2188103:1
so has part: feature:2168694-2168805:1:exon
so has part: feature:2170452-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176018-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2188103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2168694-2168805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2170452-2170640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2172230-2172437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2172864-2172973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2174564-2174777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175108-2175227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176018-2176192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2176347-2176440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2177023-2180634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2180780-2180876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2181000-2181173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2181485-2181708:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2181992-2182174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2182801-2182942:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2183390-2183491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2183698-2183810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2184319-2184390:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2184803-2184952:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185057-2185164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2185418-2185584:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2185824-2185916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2186486-2186635:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2186970-2187057:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2187164-2188103:1:exon

setx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: setx
product: senataxin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035521389.1
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2168694..2168805,2170452..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176021..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186790..2186885,2186970..2187057,2187164..2188103)
location: region:2168694-2188103:1
so has part: feature:2168694-2168805:1:exon
so has part: feature:2170452-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176021-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186790-2186885:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2188103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2168694-2168805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2170452-2170640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2172230-2172437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2172864-2172973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2174564-2174777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175108-2175227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176021-2176192:1:exon

position:2176021:1
position: 2176021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2176347-2176440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2177023-2180634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2180780-2180876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2181000-2181173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2181485-2181708:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2181992-2182174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2182801-2182942:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2183390-2183491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2183698-2183810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2184319-2184390:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2184803-2184952:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185057-2185164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2185418-2185584:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2185824-2185916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2186486-2186635:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2186790-2186885:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2186970-2187057:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2187164-2188103:1:exon

setx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: setx
product: senataxin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035521388.1
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2169319..2169773,2170452..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176018..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186790..2186885,2186970..2187057,2187164..2188103)
location: region:2169319-2188103:1
so has part: feature:2169319-2169773:1:exon
so has part: feature:2170452-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176018-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186790-2186885:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2188103:1:exon

position:2169319:1
position: 2169319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2169319-2169773:1:exon

position:2169773:1
position: 2169773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2170452-2170640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2172230-2172437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2172864-2172973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2174564-2174777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175108-2175227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176018-2176192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2176347-2176440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2177023-2180634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2180780-2180876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2181000-2181173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2181485-2181708:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2181992-2182174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2182801-2182942:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2183390-2183491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2183698-2183810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2184319-2184390:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2184803-2184952:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185057-2185164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2185418-2185584:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2185824-2185916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2186486-2186635:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2186790-2186885:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2186970-2187057:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2187164-2188103:1:exon

setx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: setx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable helicase senataxin isoform X1
translation: METCLWCSAESDEVVTVTLQRYCTDRMSPQEMQSANDDLIHCGECVVKYHGVRDGVPHLHKRLWELETSRLLKVYQKLLDVKLEEADVYVVDDGHERPVLEFSPEEFIVRLRFPIMEVLKYPYLLCNRDLCNVLVKVICKMQEMENPVPVTGKYQGIYLLMVHPNEMVRRWAIATARSLGRVDRDMYYELEEIFSCMFYIVELGISLDFPELDDYCSGKIQMLPSHLYDSKNKKNYWLGVCMLLMQLDSQAMDSLFMGPEKCTNILQCILNTMTDRQEEEDGASDPFWPALQCFMVILDRLGSQVWSRIEPTDAFQAVTLAPSYVDEIQNIRQKTTGTRVKLEHKDDEDMVSCSQMVYDCYSAEQGNGWSDWPSDRTGSSTAVIFEEMSCLVNILQSEIGQDMRVYGSTFLWFIPFVRSVMELPELGIVFLVIHYLCDKINMDVLSGHAHTCDKVTEFFVRVLVDVIELHLSKDCMSVLEPCTREWVMVIVLSAMLSGEACVNVTSDRKGRSHRVTSTSSHASVTGVGAMSQACMKLILALLKKGRRMGTDPDATRFLNLLNVHLREVPSRGWNLTKSECDDLQNCLGKLAKAIGSRSAASAVPSVLPTPPAGPPGSLISLNSTSPHSPQQPQCKDAETCTRAAFSVVKEEPQWECAETQDFCSGLETIGVKKEPRSPVLISEIKAELKPDFGKMEEIRSKLNDGQNLVKIQAIAMRRSDSGRGLNECHNLEDAGCVSGNTYPAPSGSAKQTEHSKNNWNEDSDEDASLVRRRCRKMSLGGLSSDSEHDACDSRNMSTQPFRSAMEDAHSNIIVISDDEVDASDEKLVGEGPCSEASKTKSVLDKSPGRDYDDQSESQVFEFETQENIPSAWDNLSLDGPAMTKKHKRHTTSEACTSCDAAEPLSSWASKTQPVTDEDIEKACQQVEEQISKQQQLWEPFASSTLAPAKPSDSPEMQDHFIQPKPRAPKTPTKKSAMADAKGKPCRNKKAVLIQPLSKKLNRGSHSASAQESEKPPPSMTPSSEPPVSVYPLTSSSVTCQMSSPAIVPPKKVRKHVESESAAERLGLKKKQRKAFELSQRSLDCVGELRSYGQNVHVEPQQKSKRIRGKGKPQPKLMGKGRKKLLAFQEVQCCMQSRRKCQRLKPTSAAPQKPAESPVTETLSKPTCTPGSTGAPERGEEEEEEDDYSFLPCSQPDPDQKTDSKKAAKRVKLAMPEEFDKWRSEQISHALLSDSRSLESSKGTDGSASSTTECTERVNEGGLDNEDEWRSLTQNEATDMELCSQVDEMEQYGFWTQRDPVHMDIDTAEPDTTLGGAGAAPNCLSTSVSERATPAVPAQSSINDGLFLKPGLPPVTHKAKPSTAKIYASISRSASLAKEMEKASKHVPTACVAKAKAAHSSPLVLPLPNPARVPPAPQPPPKPFIPPQPPMGSLNQAAKAVPSKLAQPPANQANKAVPHRSILHPSNPFPKSTDPLPNISQASQLRSYNTRPRPAAPVSVPAATMDLPQTLDQSYLTQAVLKWEHRMFDNYKTFGPPDDLHPLPLKKVPTMFSSYPDYFSVLFPLLLLNAFEELATEWHSGSKIELDLKVQGIEYCNRTASASFTASLNSQQDMKQLYPKEEDLVFLWLPENTGAYTSDEPEIHDSLPCVGFVSRSVVYSKGGGQPSTLNLTIQTRGNVSSVSNKPVRCKVIGSLVTTLREFRALCELKLGMMKKAILSRHVAYLTPCQEDQRQRGTPTFYLQESVGDVYNEDQEKAIGYGVAMVKRSQKMPKILLIHGPPGTGKSKTIVGLLYKLLIDDRASTSVSHQGKCSRMRILVCAPSNAAIDNLMKKMIPTFKEKSNCPQGNCGDINLVRLGSEKTISAVLHPFSLDRQTKARTLKAQQASDSDIQRQKEELEQRIENISQQCARTLKKSDEFVQLMAQKSHYLKEREKLGRQLKENRRKRQEVQARLLQEANVICSTLSTSGSVVLESAFRRLGREPFSCVIVDEAGQAKETET…
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2170458..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176018..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186790..2186885,2186970..2187057,2187164..2187724)
location: region:2170458-2187724:1
so has part: feature:2170458-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176018-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186790-2186885:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2187724:1:exon

XP_035377280.1
type: Protein
SIO_000068: ncbiprotein

position:2170458:1
position: 2170458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2187724:1
position: 2187724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2170458-2170640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172230-2172437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2172864-2172973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2174564-2174777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175108-2175227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2176018-2176192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176347-2176440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2177023-2180634:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180780-2180876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2181000-2181173:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2181485-2181708:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2181992-2182174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2182801-2182942:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2183390-2183491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2183698-2183810:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2184319-2184390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2184803-2184952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2185057-2185164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185418-2185584:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2185824-2185916:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2186486-2186635:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2186790-2186885:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2186970-2187057:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2187164-2187724:1:exon

setx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: setx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable helicase senataxin isoform X1
translation: METCLWCSAESDEVVTVTLQRYCTDRMSPQEMQSANDDLIHCGECVVKYHGVRDGVPHLHKRLWELETSRLLKVYQKLLDVKLEEADVYVVDDGHERPVLEFSPEEFIVRLRFPIMEVLKYPYLLCNRDLCNVLVKVICKMQEMENPVPVTGKYQGIYLLMVHPNEMVRRWAIATARSLGRVDRDMYYELEEIFSCMFYIVELGISLDFPELDDYCSGKIQMLPSHLYDSKNKKNYWLGVCMLLMQLDSQAMDSLFMGPEKCTNILQCILNTMTDRQEEEDGASDPFWPALQCFMVILDRLGSQVWSRIEPTDAFQAVTLAPSYVDEIQNIRQKTTGTRVKLEHKDDEDMVSCSQMVYDCYSAEQGNGWSDWPSDRTGSSTAVIFEEMSCLVNILQSEIGQDMRVYGSTFLWFIPFVRSVMELPELGIVFLVIHYLCDKINMDVLSGHAHTCDKVTEFFVRVLVDVIELHLSKDCMSVLEPCTREWVMVIVLSAMLSGEACVNVTSDRKGRSHRVTSTSSHASVTGVGAMSQACMKLILALLKKGRRMGTDPDATRFLNLLNVHLREVPSRGWNLTKSECDDLQNCLGKLAKAIGSRSAASAVPSVLPTPPAGPPGSLISLNSTSPHSPQQPQCKDAETCTRAAFSVVKEEPQWECAETQDFCSGLETIGVKKEPRSPVLISEIKAELKPDFGKMEEIRSKLNDGQNLVKIQAIAMRRSDSGRGLNECHNLEDAGCVSGNTYPAPSGSAKQTEHSKNNWNEDSDEDASLVRRRCRKMSLGGLSSDSEHDACDSRNMSTQPFRSAMEDAHSNIIVISDDEVDASDEKLVGEGPCSEASKTKSVLDKSPGRDYDDQSESQVFEFETQENIPSAWDNLSLDGPAMTKKHKRHTTSEACTSCDAAEPLSSWASKTQPVTDEDIEKACQQVEEQISKQQQLWEPFASSTLAPAKPSDSPEMQDHFIQPKPRAPKTPTKKSAMADAKGKPCRNKKAVLIQPLSKKLNRGSHSASAQESEKPPPSMTPSSEPPVSVYPLTSSSVTCQMSSPAIVPPKKVRKHVESESAAERLGLKKKQRKAFELSQRSLDCVGELRSYGQNVHVEPQQKSKRIRGKGKPQPKLMGKGRKKLLAFQEVQCCMQSRRKCQRLKPTSAAPQKPAESPVTETLSKPTCTPGSTGAPERGEEEEEEDDYSFLPCSQPDPDQKTDSKKAAKRVKLAMPEEFDKWRSEQISHALLSDSRSLESSKGTDGSASSTTECTERVNEGGLDNEDEWRSLTQNEATDMELCSQVDEMEQYGFWTQRDPVHMDIDTAEPDTTLGGAGAAPNCLSTSVSERATPAVPAQSSINDGLFLKPGLPPVTHKAKPSTAKIYASISRSASLAKEMEKASKHVPTACVAKAKAAHSSPLVLPLPNPARVPPAPQPPPKPFIPPQPPMGSLNQAAKAVPSKLAQPPANQANKAVPHRSILHPSNPFPKSTDPLPNISQASQLRSYNTRPRPAAPVSVPAATMDLPQTLDQSYLTQAVLKWEHRMFDNYKTFGPPDDLHPLPLKKVPTMFSSYPDYFSVLFPLLLLNAFEELATEWHSGSKIELDLKVQGIEYCNRTASASFTASLNSQQDMKQLYPKEEDLVFLWLPENTGAYTSDEPEIHDSLPCVGFVSRSVVYSKGGGQPSTLNLTIQTRGNVSSVSNKPVRCKVIGSLVTTLREFRALCELKLGMMKKAILSRHVAYLTPCQEDQRQRGTPTFYLQESVGDVYNEDQEKAIGYGVAMVKRSQKMPKILLIHGPPGTGKSKTIVGLLYKLLIDDRASTSVSHQGKCSRMRILVCAPSNAAIDNLMKKMIPTFKEKSNCPQGNCGDINLVRLGSEKTISAVLHPFSLDRQTKARTLKAQQASDSDIQRQKEELEQRIENISQQCARTLKKSDEFVQLMAQKSHYLKEREKLGRQLKENRRKRQEVQARLLQEANVICSTLSTSGSVVLESAFRRLGREPFSCVIVDEAGQAKETET…
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2170458..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176018..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186790..2186885,2186970..2187057,2187164..2187724)
location: region:2170458-2187724:1
so has part: feature:2170458-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176018-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186790-2186885:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2187724:1:exon

XP_035377281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2170458-2170640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172230-2172437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2172864-2172973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2174564-2174777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175108-2175227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2176018-2176192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176347-2176440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2177023-2180634:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180780-2180876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2181000-2181173:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2181485-2181708:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2181992-2182174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2182801-2182942:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2183390-2183491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2183698-2183810:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2184319-2184390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2184803-2184952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2185057-2185164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185418-2185584:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2185824-2185916:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2186486-2186635:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2186790-2186885:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2186970-2187057:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2187164-2187724:1:exon

setx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: setx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable helicase senataxin isoform X3
translation: METCLWCSAESDEVVTVTLQRYCTDRMSPQEMQSANDDLIHCGECVVKYHGVRDGVPHLHKRLWELETSRLLKVYQKLLDVKLEEADVYVVDDGHERPVLEFSPEEFIVRLRFPIMEVLKYPYLLCNRDLCNVLVKVICKMQEMENPVPVTGKYQGIYLLMVHPNEMVRRWAIATARSLGRVDRDMYYELEEIFSCMFYIVELGISLDFPELDDYCSGKIQMLPSHLYDSKNKKNYWLGVCMLLMQLDSQAMDSLFMGPEKCTNILQCILNTMTDRQEEEDGASDPFWPALQCFMVILDRLGSQVWSRIEPTDAFQAVTLAPSYVDEIQNIRQKTTGTRVKLEHKDDEDMVSCSQMVYDCYSAEQGNGWSDWPSDRTGSSTAVIFEEMSCLVNILQSEIGQDMRVYGSTFLWFIPFVRSVMELPELGIVFLVIHYLCDKINMDVLSGHAHTCDKVTEFFVRVLVDVIELHLSKDCMSVLEPCTREWVMVIVLSAMLSGEACVNVTSDRKGRSHRVTSTSSHASVTGVGAMSQACMKLILALLKKGRRMGTDPDATRFLNLLNVHLREVPSRGWNLTKSECDDLQNCLGKLAKAIGSRSAASAVPSVLPTPPAGPPGSLISLNSTSPHSPQQPQCKDAETCTRAAFSVVKEEPQWECAETQDFCSGLETIGVKKEPRSPVLISEIKAELKPDFGKMEEIRSKLNDGQNLVKIQAIAMRRSDSGRGLNECHNLEDAGCVSGNTYPAPSGSAKQTEHSKNNWNEDSDEDASLVRRRCRKMSLGGLSSDSEHDACDSRNMSTQPFRSAMEDAHSNIIVISDDEVDASDEKLVGEGPCSEASKTKSVLDKSPGRDYDDQSESQVFEFETQENIPSAWDNLSLDGPAMTKKHKRHTTSEACTSCDAAEPLSSWASKTQPVTDEDIEKACQQVEEQISKQQQLWEPFASSTLAPAKPSDSPEMQDHFIQPKPRAPKTPTKKSAMADAKGKPCRNKKAVLIQPLSKKLNRGSHSASAQESEKPPPSMTPSSEPPVSVYPLTSSSVTCQMSSPAIVPPKKVRKHVESESAAERLGLKKKQRKAFELSQRSLDCVGELRSYGQNVHVEPQQKSKRIRGKGKPQPKLMGKGRKKLLAFQEVQCCMQSRRKCQRLKPTSAAPQKPAESPVTETLSKPTCTPGSTGAPERGEEEEEEDDYSFLPCSQPDPDQKTDSKKAAKRVKLAMPEEFDKWRSEQISHALLSDSRSLESSKGTDGSASSTTECTERVNEGGLDNEDEWRSLTQNEATDMELCSQVDEMEQYGFWTQRDPVHMDIDTAEPDTTLGGAGAAPNCLSTSVSERATPAVPAQSSINDGLFLKPGLPPVTHKAKPSTAKIYASISRSASLAKEMEKASKHVPTACVAKAKAAHSSPLVLPLPNPARVPPAPQPPPKPFIPPQPPMGSLNQAAKAVPSKLAQPPANQANKAVPHRSILHPSNPFPKSTDPLPNISQASQLRSYNTRPRPAAPVSVPAATMDLPQTLDQSYLTQAVLKWEHRMFDNYKTFGPPDDLHPLPLKKVPTMFSSYPDYFSVLFPLLLLNAFEELATEWHSGSKIELDLKVQGIEYCNRTASASFTASLNSQQDMKQLYPKEEDLVFLWLPENTGAYTSDEPEIHDSLPCVGFVSRSVVYSKGGGQPSTLNLTIQTRGNVSSVSNKPVRCKVIGSLVTTLREFRALCELKLGMMKKAILSRHVAYLTPCQEDQRQRGTPTFYLQESVGDVYNEDQEKAIGYGVAMVKRSQKMPKILLIHGPPGTGKSKTIVGLLYKLLIDDRASTSVSHQGKCSRMRILVCAPSNAAIDNLMKKMIPTFKEKSNCPQGNCGDINLVRLGSEKTISAVLHPFSLDRQTKARTLKAQQASDSDIQRQKEELEQRIENISQQCARTLKKSDEFVQLMAQKSHYLKEREKLGRQLKENRRKRQEVQARLLQEANVICSTLSTSGSVVLESAFRRLGREPFSCVIVDEAGQAKETET…
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2170458..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176018..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186970..2187057,2187164..2187724)
location: region:2170458-2187724:1
so has part: feature:2170458-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176018-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2187724:1:exon

XP_035377283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2170458-2170640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172230-2172437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2172864-2172973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2174564-2174777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175108-2175227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2176018-2176192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176347-2176440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2177023-2180634:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180780-2180876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2181000-2181173:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2181485-2181708:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2181992-2182174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2182801-2182942:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2183390-2183491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2183698-2183810:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2184319-2184390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2184803-2184952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2185057-2185164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185418-2185584:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2185824-2185916:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2186486-2186635:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2186970-2187057:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2187164-2187724:1:exon

setx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: setx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable helicase senataxin isoform X2
translation: METCLWCSAESDEVVTVTLQRYCTDRMSPQEMQSANDDLIHCGECVVKYHGVRDGVPHLHKRLWELETSRLLKVYQKLLDVKLEEADVYVVDDGHERPVLEFSPEEFIVRLRFPIMEVLKYPYLLCNRDLCNVLVKVICKMQEMENPVPVTGKYQGIYLLMVHPNEMVRRWAIATARSLGRVDRDMYYELEEIFSCMFYIVELGISLDFPELDDYCSGKIQMLPSHLYDSKNKKNYWLGVCMLLMQLDSQAMDSLFMGPEKCTNILQCILNTMTDRQEEDGASDPFWPALQCFMVILDRLGSQVWSRIEPTDAFQAVTLAPSYVDEIQNIRQKTTGTRVKLEHKDDEDMVSCSQMVYDCYSAEQGNGWSDWPSDRTGSSTAVIFEEMSCLVNILQSEIGQDMRVYGSTFLWFIPFVRSVMELPELGIVFLVIHYLCDKINMDVLSGHAHTCDKVTEFFVRVLVDVIELHLSKDCMSVLEPCTREWVMVIVLSAMLSGEACVNVTSDRKGRSHRVTSTSSHASVTGVGAMSQACMKLILALLKKGRRMGTDPDATRFLNLLNVHLREVPSRGWNLTKSECDDLQNCLGKLAKAIGSRSAASAVPSVLPTPPAGPPGSLISLNSTSPHSPQQPQCKDAETCTRAAFSVVKEEPQWECAETQDFCSGLETIGVKKEPRSPVLISEIKAELKPDFGKMEEIRSKLNDGQNLVKIQAIAMRRSDSGRGLNECHNLEDAGCVSGNTYPAPSGSAKQTEHSKNNWNEDSDEDASLVRRRCRKMSLGGLSSDSEHDACDSRNMSTQPFRSAMEDAHSNIIVISDDEVDASDEKLVGEGPCSEASKTKSVLDKSPGRDYDDQSESQVFEFETQENIPSAWDNLSLDGPAMTKKHKRHTTSEACTSCDAAEPLSSWASKTQPVTDEDIEKACQQVEEQISKQQQLWEPFASSTLAPAKPSDSPEMQDHFIQPKPRAPKTPTKKSAMADAKGKPCRNKKAVLIQPLSKKLNRGSHSASAQESEKPPPSMTPSSEPPVSVYPLTSSSVTCQMSSPAIVPPKKVRKHVESESAAERLGLKKKQRKAFELSQRSLDCVGELRSYGQNVHVEPQQKSKRIRGKGKPQPKLMGKGRKKLLAFQEVQCCMQSRRKCQRLKPTSAAPQKPAESPVTETLSKPTCTPGSTGAPERGEEEEEEDDYSFLPCSQPDPDQKTDSKKAAKRVKLAMPEEFDKWRSEQISHALLSDSRSLESSKGTDGSASSTTECTERVNEGGLDNEDEWRSLTQNEATDMELCSQVDEMEQYGFWTQRDPVHMDIDTAEPDTTLGGAGAAPNCLSTSVSERATPAVPAQSSINDGLFLKPGLPPVTHKAKPSTAKIYASISRSASLAKEMEKASKHVPTACVAKAKAAHSSPLVLPLPNPARVPPAPQPPPKPFIPPQPPMGSLNQAAKAVPSKLAQPPANQANKAVPHRSILHPSNPFPKSTDPLPNISQASQLRSYNTRPRPAAPVSVPAATMDLPQTLDQSYLTQAVLKWEHRMFDNYKTFGPPDDLHPLPLKKVPTMFSSYPDYFSVLFPLLLLNAFEELATEWHSGSKIELDLKVQGIEYCNRTASASFTASLNSQQDMKQLYPKEEDLVFLWLPENTGAYTSDEPEIHDSLPCVGFVSRSVVYSKGGGQPSTLNLTIQTRGNVSSVSNKPVRCKVIGSLVTTLREFRALCELKLGMMKKAILSRHVAYLTPCQEDQRQRGTPTFYLQESVGDVYNEDQEKAIGYGVAMVKRSQKMPKILLIHGPPGTGKSKTIVGLLYKLLIDDRASTSVSHQGKCSRMRILVCAPSNAAIDNLMKKMIPTFKEKSNCPQGNCGDINLVRLGSEKTISAVLHPFSLDRQTKARTLKAQQASDSDIQRQKEELEQRIENISQQCARTLKKSDEFVQLMAQKSHYLKEREKLGRQLKENRRKRQEVQARLLQEANVICSTLSTSGSVVLESAFRRLGREPFSCVIVDEAGQAKETETL…
SIO_010081: setx
subclass of: SO_0000673
so part of: setx
location: join(2170458..2170640,2172230..2172437,2172864..2172973,2174564..2174777,2175108..2175227,2176021..2176192,2176347..2176440,2177023..2180634,2180780..2180876,2181000..2181173,2181485..2181708,2181992..2182174,2182801..2182942,2183390..2183491,2183698..2183810,2184319..2184390,2184803..2184952,2185057..2185164,2185418..2185584,2185824..2185916,2186486..2186635,2186790..2186885,2186970..2187057,2187164..2187724)
location: region:2170458-2187724:1
so has part: feature:2170458-2170640:1:exon
so has part: feature:2172230-2172437:1:exon
so has part: feature:2172864-2172973:1:exon
so has part: feature:2174564-2174777:1:exon
so has part: feature:2175108-2175227:1:exon
so has part: feature:2176021-2176192:1:exon
so has part: feature:2176347-2176440:1:exon
so has part: feature:2177023-2180634:1:exon
so has part: feature:2180780-2180876:1:exon
so has part: feature:2181000-2181173:1:exon
so has part: feature:2181485-2181708:1:exon
so has part: feature:2181992-2182174:1:exon
so has part: feature:2182801-2182942:1:exon
so has part: feature:2183390-2183491:1:exon
so has part: feature:2183698-2183810:1:exon
so has part: feature:2184319-2184390:1:exon
so has part: feature:2184803-2184952:1:exon
so has part: feature:2185057-2185164:1:exon
so has part: feature:2185418-2185584:1:exon
so has part: feature:2185824-2185916:1:exon
so has part: feature:2186486-2186635:1:exon
so has part: feature:2186790-2186885:1:exon
so has part: feature:2186970-2187057:1:exon
so has part: feature:2187164-2187724:1:exon

XP_035377282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2170458-2170640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172230-2172437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2172864-2172973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2174564-2174777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175108-2175227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2176021-2176192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176347-2176440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2177023-2180634:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180780-2180876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2181000-2181173:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2181485-2181708:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2181992-2182174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2182801-2182942:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2183390-2183491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2183698-2183810:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2184319-2184390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2184803-2184952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2185057-2185164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185418-2185584:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2185824-2185916:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2186486-2186635:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2186790-2186885:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2186970-2187057:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2187164-2187724:1:exon

LOC113568351
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: LOC113568351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2194755..2266396)
location: region:2194755-2266396:-1
so has part: feature:2194755-2266396:-1:exon
subclass of: SO_0000010

113568351
type: Gene
SIO_000068: ncbigene

position:2194755:-1
position: 2194755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2266396:-1
position: 2266396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2194755-2266396:-1:exon

LOC113568351
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: LOC113568351
product: netrin-G2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035521429.1
SIO_010081: LOC113568351
subclass of: SO_0000673
so part of: LOC113568351
location: complement(join(2194755..2197168,2200524..2200658,2201762..2201929,2231746..2231775,2235317..2235489,2250351..2250973,2264417..2265082,2265918..2266396))
location: region:2194755-2266396:-1
so has part: feature:2265918-2266396:-1:exon
so has part: feature:2264417-2265082:-1:exon
so has part: feature:2250351-2250973:-1:exon
so has part: feature:2235317-2235489:-1:exon
so has part: feature:2231746-2231775:-1:exon
so has part: feature:2201762-2201929:-1:exon
so has part: feature:2200524-2200658:-1:exon
so has part: feature:2194755-2197168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2265918-2266396:-1:exon

position:2265918:-1
position: 2265918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2264417-2265082:-1:exon

position:2264417:-1
position: 2264417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2265082:-1
position: 2265082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2250351-2250973:-1:exon

position:2250351:-1
position: 2250351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2250973:-1
position: 2250973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2235317-2235489:-1:exon

position:2235317:-1
position: 2235317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235489:-1
position: 2235489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2231746-2231775:-1:exon

position:2231746:-1
position: 2231746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231775:-1
position: 2231775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2201762-2201929:-1:exon

position:2201762:-1
position: 2201762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2201929:-1
position: 2201929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2200524-2200658:-1:exon

position:2200524:-1
position: 2200524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2200658:-1
position: 2200658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2194755-2197168:-1:exon

position:2197168:-1
position: 2197168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113568351
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: LOC113568351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: netrin-G2
translation: MLTPLISEPTVAPLPDPQTARSQAPVMLAQAALLMVLHALARTRGQYELCKSLVSTDDGAVWEQYACQPKAQSTKEYMRIRVEPPGITCGNPPERFCTLENPYLCSDECDASNPDLAHPPQLMKDRERGGLLTYWQTVTWRRYPEPLLANITLSWNKSLELAGDLQVVFEYGRPTAMALDKSLDHGRTWHPYQFYADDCAEAFGMSPRRAADLVPGNATRVICTEEYSRWVGAKGDKVVRFEARKRLALFGEGLYARLENTKGLRDFFTFTNLRLRLLRPALGGTYVQRDNLLKYFYAISNIEVPARCKCNLHGSQCVLVNGTLHCVCEHNTTGQDCQRCKRGFRAKSWKPGSYLPTPHGLPNTCAQAGSPSASNCECYGHSNRCSYIDYLNIITCVSCKHNTRGQNCQHCRWGFYRNVSVELDDESVCVECGCHQMGSLHDRCNSTGFCQCKKGAAGAKCDECLPGYHWRQGCQLNVCDEELLVCQNGGTCEQNQRCLCPAHFQGVLCQHARCEGGSMCDHASASAAAALSLALLLGLSGALLLGCAP
SIO_010081: LOC113568351
subclass of: SO_0000673
so part of: LOC113568351
location: complement(join(2196945..2197168,2200524..2200658,2201762..2201929,2231746..2231775,2235317..2235489,2250351..2250973,2264417..2264713))
location: region:2196945-2264713:-1
so has part: feature:2264417-2264713:-1:exon
so has part: feature:2250351-2250973:-1:exon
so has part: feature:2235317-2235489:-1:exon
so has part: feature:2231746-2231775:-1:exon
so has part: feature:2201762-2201929:-1:exon
so has part: feature:2200524-2200658:-1:exon
so has part: feature:2196945-2197168:-1:exon

XP_035377322.1
type: Protein
SIO_000068: ncbiprotein

position:2196945:-1
position: 2196945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2264713:-1
position: 2264713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2264417-2264713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2250351-2250973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2235317-2235489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2231746-2231775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2201762-2201929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2200524-2200658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2196945-2197168:-1:exon

rapgef1b
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2352535..2387890
location: region:2352535-2387890:1
so has part: feature:2352535-2387890:1:exon
subclass of: SO_0000010

113588027
type: Gene
SIO_000068: ncbigene

position:2352535:1
position: 2352535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2387890:1
position: 2387890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352535-2387890:1:exon

rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035521398.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2352535..2352769,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372124..2372186,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2387890)
location: region:2352535-2387890:1
so has part: feature:2352535-2352769:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372124-2372186:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373728-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2377968-2378126:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2387890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2352535-2352769:1:exon

position:2352769:1
position: 2352769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

position:2367783:1
position: 2367783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2367928:1
position: 2367928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

position:2368262:1
position: 2368262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2368440:1
position: 2368440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

position:2369546:1
position: 2369546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2369702:1
position: 2369702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

position:2369889:1
position: 2369889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2369977:1
position: 2369977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

position:2370226:1
position: 2370226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2370378:1
position: 2370378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2372124-2372186:1:exon

position:2372124:1
position: 2372124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2372186:1
position: 2372186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2372658-2372778:1:exon

position:2372658:1
position: 2372658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2372778:1
position: 2372778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2373728-2373911:1:exon

position:2373728:1
position: 2373728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2373911:1
position: 2373911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2374050-2374493:1:exon

position:2374050:1
position: 2374050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2374493:1
position: 2374493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2375197-2375402:1:exon

position:2375197:1
position: 2375197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2375402:1
position: 2375402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2377968-2378126:1:exon

position:2377968:1
position: 2377968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378126:1
position: 2378126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2380254-2380343:1:exon

position:2380254:1
position: 2380254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380343:1
position: 2380343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2380701-2380789:1:exon

position:2380701:1
position: 2380701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380789:1
position: 2380789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2380904-2380994:1:exon

position:2380904:1
position: 2380904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380994:1
position: 2380994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2381465-2381540:1:exon

position:2381465:1
position: 2381465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2381540:1
position: 2381540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2381741-2381825:1:exon

position:2381741:1
position: 2381741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2381825:1
position: 2381825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2382451-2382543:1:exon

position:2382451:1
position: 2382451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2382543:1
position: 2382543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2382826-2383011:1:exon

position:2382826:1
position: 2382826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383011:1
position: 2383011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2383240-2383324:1:exon

position:2383240:1
position: 2383240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383324:1
position: 2383324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2384487-2384581:1:exon

position:2384487:1
position: 2384487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2384581:1
position: 2384581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2385013-2385091:1:exon

position:2385013:1
position: 2385013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385091:1
position: 2385091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2385574-2385675:1:exon

position:2385574:1
position: 2385574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385675:1
position: 2385675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2385813-2385910:1:exon

position:2385813:1
position: 2385813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385910:1
position: 2385910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2386080-2386208:1:exon

position:2386080:1
position: 2386080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386208:1
position: 2386208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2386672-2387890:1:exon

position:2386672:1
position: 2386672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X3
translation: MSGKIESKQDSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHRSRMQLCSDHVSGQWRDTVIGTPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLASHSSSPSSSSSSSLSLLPPSAGIPEEAESALGLSLSVSNAFLSGHASLTTPTSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2352742..2352769,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372124..2372186,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2352742-2386822:1
so has part: feature:2352742-2352769:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372124-2372186:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373728-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2377968-2378126:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377291.1
type: Protein
SIO_000068: ncbiprotein

position:2352742:1
position: 2352742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386822:1
position: 2386822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352742-2352769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372124-2372186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2373728-2373911:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2377968-2378126:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2386672-2386822:1:exon

rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035521397.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2353338..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372124..2372186,2372658..2372778,2373731..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2387890)
location: region:2353338-2387890:1
so has part: feature:2353338-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372124-2372186:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373731-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2377968-2378126:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2387890:1:exon

position:2353338:1
position: 2353338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353338-2354251:1:exon

position:2354251:1
position: 2354251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372124-2372186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2373731-2373911:1:exon

position:2373731:1
position: 2373731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2377968-2378126:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2381741-2381825:1:exon

urn:…
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rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035521396.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
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position:2353553:1
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type: ForwardStrandPosition
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rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035521401.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2353555..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372124..2372186,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2387890)
location: region:2353555-2387890:1
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position:2353555:1
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type: ForwardStrandPosition
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rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035521400.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2353556..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373731..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2387890)
location: region:2353556-2387890:1
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rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035521399.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2353558..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2387890)
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position:2353558:1
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rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035521404.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2353558..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373731..2373911,2374050..2374493,2375197..2375402,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2387890)
location: region:2353558-2387890:1
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so has part: feature:2372658-2372778:1:exon
so has part: feature:2373731-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2387890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2353558-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2373731-2373911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386672-2387890:1:exon

rapgef1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: rapgef1b
product: Rap guanine nucleotide exchange factor (GEF) 1b, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035521402.1
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2353650..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2387890)
location: region:2353650-2387890:1
so has part: feature:2353650-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373728-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2387890:1:exon

position:2353650:1
position: 2353650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353650-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2373728-2373911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386672-2387890:1:exon

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X1
translation: MTEWVCEAETECENSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHRSRMQLCSDHVSGQWRDTVIGTPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLASHSSSPSSSSSSSLSLLPPSAGIPEEAESALGLSLSVSNAFLSGHASLTTPTSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2354212..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372124..2372186,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2354212-2386822:1
so has part: feature:2354212-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372124-2372186:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373728-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2377968-2378126:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377289.1
type: Protein
SIO_000068: ncbiprotein

position:2354212:1
position: 2354212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2354212-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372124-2372186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2373728-2373911:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2377968-2378126:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2386672-2386822:1:exon

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X6
translation: MTEWVCEAETECENSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHRSRMQLCSDHVSGQWRDTVIGTPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2354212..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372124..2372186,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2354212-2386822:1
so has part: feature:2354212-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372124-2372186:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373728-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354212-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372124-2372186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2373728-2373911:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2386672-2386822:1:exon

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X2
translation: MTEWVCEAETECENSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHRSRMQLCSDHVSGQWRDTVIGTPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLASHSSSPSSSSSSSLSLLPPSAGIPEEAESALGLSLSVSNAFLSGHASLTTPTSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2354212..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372124..2372186,2372658..2372778,2373731..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2354212-2386822:1
so has part: feature:2354212-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372124-2372186:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373731-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2377968-2378126:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354212-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372124-2372186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2373731-2373911:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2377968-2378126:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2386672-2386822:1:exon

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X4
translation: MTEWVCEAETECENSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHSPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLASHSSSPSSSSSSSLSLLPPSAGIPEEAESALGLSLSVSNAFLSGHASLTTPTSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2354212..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2354212-2386822:1
so has part: feature:2354212-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373728-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2377968-2378126:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354212-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2373728-2373911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2377968-2378126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2386672-2386822:1:exon

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X7
translation: MTEWVCEAETECENSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHSPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2354212..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373728..2373911,2374050..2374493,2375197..2375402,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2354212-2386822:1
so has part: feature:2354212-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373728-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354212-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2373728-2373911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386672-2386822:1:exon

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X5
translation: MTEWVCEAETECENSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHSPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLASHSSSPSSSSSSSLSLLPPSAGIPEEAESALGLSLSVSNAFLSGHASLTTPTSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2354212..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373731..2373911,2374050..2374493,2375197..2375402,2377968..2378126,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2354212-2386822:1
so has part: feature:2354212-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373731-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2377968-2378126:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354212-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2373731-2373911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2377968-2378126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2386672-2386822:1:exon

rapgef1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: rapgef1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 1b isoform X8
translation: MTEWVCEAETECENSQRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQQAAEPAVKSAEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMAVDSKVLQMLPGSASKVLEAILPLVQVEARSLHSSAIASCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTAVIKAVLDGVKELVKLTIEKQEQPCPASPSKPAPPVAKTESVCEMPLTDREKEILSKTTPIATPTDSLTDISEEEVAPPKPPLPGPKLAEHSPPALPPKKRQSAPSPTRVAVVAPMSRTNCGLHLLPGSLKQDYEVDLHQRRFSGGSQSYGGDSPHLSPCSSMGKLSKSDEQLSSLEHDSGQCSRNTSCETLDNTDRYDPDYDFLHQDLSVSEPLPFPSLPSGCLSPLPECLSESPSPSPTHPRFSAPVANQVSGDHWATPSAPGAANEERPPALPQKKRRSAPILSPFPLYERLPSHYDNLSEEDAATPPFPQCNGGEVLSRSVGSDSPPPLPEKKSRTILQYMQFVEDYSEPQPCVFYQTPQSERIYEQRRNKRFQEVYGHNEPLSTCEPQHEATPPPALPPKQRQLSESANDETGEGEYVNLYSASQANGDTTHHSDTPTHCDDVLVDPAPHIPTSNSKEALPKERVKLTDMQEDIDELSLVDHKEIMNRITLKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFMTPEDLIKKLHYRYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRKLMDLVFQLVCSGELSLARVLRKNILDKVEQKRLLRHTHILRPLAARGVSARPGTLHDFRSHEIADQLTLLDAGLFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDRKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKS
SIO_010081: rapgef1b
subclass of: SO_0000673
so part of: rapgef1b
location: join(2354212..2354251,2367783..2367928,2368262..2368440,2369546..2369702,2369889..2369977,2370226..2370378,2372658..2372778,2373731..2373911,2374050..2374493,2375197..2375402,2380254..2380343,2380701..2380789,2380904..2380994,2381465..2381540,2381741..2381825,2382451..2382543,2382826..2383011,2383240..2383324,2384487..2384581,2385013..2385091,2385574..2385675,2385813..2385910,2386080..2386208,2386672..2386822)
location: region:2354212-2386822:1
so has part: feature:2354212-2354251:1:exon
so has part: feature:2367783-2367928:1:exon
so has part: feature:2368262-2368440:1:exon
so has part: feature:2369546-2369702:1:exon
so has part: feature:2369889-2369977:1:exon
so has part: feature:2370226-2370378:1:exon
so has part: feature:2372658-2372778:1:exon
so has part: feature:2373731-2373911:1:exon
so has part: feature:2374050-2374493:1:exon
so has part: feature:2375197-2375402:1:exon
so has part: feature:2380254-2380343:1:exon
so has part: feature:2380701-2380789:1:exon
so has part: feature:2380904-2380994:1:exon
so has part: feature:2381465-2381540:1:exon
so has part: feature:2381741-2381825:1:exon
so has part: feature:2382451-2382543:1:exon
so has part: feature:2382826-2383011:1:exon
so has part: feature:2383240-2383324:1:exon
so has part: feature:2384487-2384581:1:exon
so has part: feature:2385013-2385091:1:exon
so has part: feature:2385574-2385675:1:exon
so has part: feature:2385813-2385910:1:exon
so has part: feature:2386080-2386208:1:exon
so has part: feature:2386672-2386822:1:exon

XP_035377297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354212-2354251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2367783-2367928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2368262-2368440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2369546-2369702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2369889-2369977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2370226-2370378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372658-2372778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2373731-2373911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2374050-2374493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2375197-2375402:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2380254-2380343:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380701-2380789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2380904-2380994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2381465-2381540:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2381741-2381825:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2382451-2382543:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2382826-2383011:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2383240-2383324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2384487-2384581:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2385013-2385091:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385574-2385675:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2385813-2385910:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2386080-2386208:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386672-2386822:1:exon

uck1
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: uck1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2388319..2391154)
location: region:2388319-2391154:-1
so has part: feature:2388319-2391154:-1:exon
subclass of: SO_0000010

113588022
type: Gene
SIO_000068: ncbigene

position:2388319:-1
position: 2388319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2391154:-1
position: 2391154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2388319-2391154:-1:exon

uck1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: uck1
product: uridine-cytidine kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_035521449.1
SIO_010081: uck1
subclass of: SO_0000673
so part of: uck1
location: complement(join(2388319..2389252,2389410..2389509,2389707..2389801,2389954..2390096,2390221..2390317,2390399..2390558,2390906..2391154))
location: region:2388319-2391154:-1
so has part: feature:2390906-2391154:-1:exon
so has part: feature:2390399-2390558:-1:exon
so has part: feature:2390221-2390317:-1:exon
so has part: feature:2389954-2390096:-1:exon
so has part: feature:2389707-2389801:-1:exon
so has part: feature:2389410-2389509:-1:exon
so has part: feature:2388319-2389252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2390906-2391154:-1:exon

position:2390906:-1
position: 2390906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2390399-2390558:-1:exon

position:2390399:-1
position: 2390399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390558:-1
position: 2390558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2390221-2390317:-1:exon

position:2390221:-1
position: 2390221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390317:-1
position: 2390317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2389954-2390096:-1:exon

position:2389954:-1
position: 2389954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390096:-1
position: 2390096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2389707-2389801:-1:exon

position:2389707:-1
position: 2389707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389801:-1
position: 2389801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2389410-2389509:-1:exon

position:2389410:-1
position: 2389410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389509:-1
position: 2389509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2388319-2389252:-1:exon

position:2389252:-1
position: 2389252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

uck1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: uck1
product: uridine-cytidine kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027027034.2
SIO_010081: uck1
subclass of: SO_0000673
so part of: uck1
location: complement(join(2388319..2389252,2389410..2389458,2389707..2389801,2389954..2390096,2390221..2390317,2390399..2390558,2390906..2391149))
location: region:2388319-2391149:-1
so has part: feature:2390906-2391149:-1:exon
so has part: feature:2390399-2390558:-1:exon
so has part: feature:2390221-2390317:-1:exon
so has part: feature:2389954-2390096:-1:exon
so has part: feature:2389707-2389801:-1:exon
so has part: feature:2389410-2389458:-1:exon
so has part: feature:2388319-2389252:-1:exon

position:2391149:-1
position: 2391149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2390906-2391149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390399-2390558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2390221-2390317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389954-2390096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2389707-2389801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2389410-2389458:-1:exon

position:2389458:-1
position: 2389458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2388319-2389252:-1:exon

uck1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: uck1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uridine-cytidine kinase 1 isoform X2
translation: MTSAGPFGEVERPRHHPFLIGVSGGTASGKSTVCAKIMELLGQNKVDHRQRKVAIVSQDCFYRVLTPEQKTKALKGQYNFDHPDAFDTELMCQTLKDIVEGRVVEVPTYDFVTHSRLQEKIRVYPADVVLFEGILVFYTQEVRDMFHMKLFVDTDSDVRLSRRVLRDMKRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWQRGAVDGHDPGRSLNRGVAEQGEMAAGGMVTTTKRPLLEPSTRPH
SIO_010081: uck1
subclass of: SO_0000673
so part of: uck1
location: complement(join(2389053..2389252,2389410..2389458,2389707..2389801,2389954..2390096,2390221..2390317,2390399..2390558,2390906..2390995))
location: region:2389053-2390995:-1
so has part: feature:2390906-2390995:-1:exon
so has part: feature:2390399-2390558:-1:exon
so has part: feature:2390221-2390317:-1:exon
so has part: feature:2389954-2390096:-1:exon
so has part: feature:2389707-2389801:-1:exon
so has part: feature:2389410-2389458:-1:exon
so has part: feature:2389053-2389252:-1:exon

XP_026882835.1
type: Protein
SIO_000068: ncbiprotein

position:2389053:-1
position: 2389053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390995:-1
position: 2390995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2390906-2390995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390399-2390558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2390221-2390317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389954-2390096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2389707-2389801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2389410-2389458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2389053-2389252:-1:exon

uck1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: uck1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uridine-cytidine kinase 1 isoform X1
translation: MTSAGPFGEVERPRHHPFLIGVSGGTASGKSTVCAKIMELLGQNKVDHRQRKVAIVSQDCFYRVLTPEQKTKALKGQYNFDHPDAFDTELMCQTLKDIVEGRVVEVPTYDFVTHSRLQEKIRVYPADVVLFEGILVFYTQEVRDMFHMKLFVDTDSDVRLSRRVLRDMKRGRDLEQILTQYTTFVKPAFEEFCLPTFTHSFRHTRHHAPRPQTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWQRGAVDGHDPGRSLNRGVAEQGEMAAGGMVTTTKRPLLEPSTRPH
SIO_010081: uck1
subclass of: SO_0000673
so part of: uck1
location: complement(join(2389053..2389252,2389410..2389509,2389707..2389801,2389954..2390096,2390221..2390317,2390399..2390558,2390906..2390995))
location: region:2389053-2390995:-1
so has part: feature:2390906-2390995:-1:exon
so has part: feature:2390399-2390558:-1:exon
so has part: feature:2390221-2390317:-1:exon
so has part: feature:2389954-2390096:-1:exon
so has part: feature:2389707-2389801:-1:exon
so has part: feature:2389410-2389509:-1:exon
so has part: feature:2389053-2389252:-1:exon

XP_035377342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2390906-2390995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390399-2390558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2390221-2390317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389954-2390096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2389707-2389801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2389410-2389509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2389053-2389252:-1:exon

dnlz
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: dnlz
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2391502..2392849)
location: region:2391502-2392849:-1
so has part: feature:2391502-2392849:-1:exon
subclass of: SO_0000010

113588023
type: Gene
SIO_000068: ncbigene

position:2391502:-1
position: 2391502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392849:-1
position: 2392849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2391502-2392849:-1:exon

dnlz
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: dnlz
product: DNL-type zinc finger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027027036.2
SIO_010081: dnlz
subclass of: SO_0000673
so part of: dnlz
location: complement(join(2391502..2391801,2392283..2392422,2392504..2392849))
location: region:2391502-2392849:-1
so has part: feature:2392504-2392849:-1:exon
so has part: feature:2392283-2392422:-1:exon
so has part: feature:2391502-2391801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2392504-2392849:-1:exon

position:2392504:-1
position: 2392504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2392283-2392422:-1:exon

position:2392283:-1
position: 2392283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392422:-1
position: 2392422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2391502-2391801:-1:exon

position:2391801:-1
position: 2391801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dnlz
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8005
gene: dnlz
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNL-type zinc finger protein
translation: MSCMFTFSVPRRGFLEYSCSAMAFPNIYRLCLDLFRPTTPARALRCLSLAARRVADGSTGPPWRAPCFRRTGSLCSARPVRRAFATSARAGDDALGQVQSSHYHLVYTCKVCSTRSMKRISKIAYHKGVVVVTCPGCRNHHVIADNLGWFSDLEGKRNIEEILAAKGETVKRIKDDAAIEIVAEETIKAGLQNREDVPLVAPQSDRSEKT
SIO_010081: dnlz
subclass of: SO_0000673
so part of: dnlz
location: complement(join(2391639..2391801,2392283..2392422,2392504..2392833))
location: region:2391639-2392833:-1
so has part: feature:2392504-2392833:-1:exon
so has part: feature:2392283-2392422:-1:exon
so has part: feature:2391639-2391801:-1:exon

XP_026882837.2
type: Protein
SIO_000068: ncbiprotein

position:2391639:-1
position: 2391639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392833:-1
position: 2392833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2392504-2392833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2392283-2392422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2391639-2391801:-1:exon

lrrc8aa
type: Gene
subclass of: SO_0000704
RO_0002162: 8005
gene: lrrc8aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2393471..2410092
location: region:2393471-2410092:1
so has part: feature:2393471-2410092:1:exon
subclass of: SO_0000010

113588031
type: Gene
SIO_000068: ncbigene

position:2393471:1
position: 2393471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2410092:1
position: 2410092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2393471-2410092:1:exon

lrrc8aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8005
gene: lrrc8aa
product: leucine rich repeat containing 8 VRAC subunit Aa
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027027048.2
SIO_010081: lrrc8aa
subclass of: SO_0000673
so part of: lrrc8aa
location: join(2393471..2393609,2398465..2398612,2398843..2399397,2400207..2400815,2401058..2401390,2401598..2401768,2405895..2406200,2409003..2410092)
location: region:2393471-2410092:1
so has part: feature:2393471-2393609:1:exon
so has part: feature:2398465-2398612:1:exon
so has part: feature:2398843-2399397:1:exon
so has part: feature:2400207-2400815:1:exon
so has part: feature:2401058-2401390:1:exon
so has part: feature:2401598-2401768:1:exon
so has part: feature:2405895-2406200:1:exon
so has part: feature:2409003-2410092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2393471-2393609:1:exon

position:2393609:1
position: 2393609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2398465-2398612:1:exon

position:2398465:1
position: 2398465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398612:1
position: 2398612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2398843-2399397:1:exon

position:2398843:1
position: 2398843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399397:1
position: 2399397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2400207-2400815:1:exon

position:2400207:1
position: 2400207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400815:1
position: 2400815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2401058-2401390:1:exon

position:2401058:1
position: 2401058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401390:1
position: 2401390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2401598-2401768:1:exon