Microtus ochrogaster isolate Prairie Vole_2 linkage group LG10, MicOch1.0, whole genome shotgun sequence.
type: Entry
definition: Microtus ochrogaster isolate Prairie Vole_2 linkage group LG10, MicOch1.0, whole genome shotgun sequence.
sequence version: NC_022035.1
sequence date: 2018-10-15
sequence: sequence
division: CON
label: NC_022035.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210839
dblink: SAMN00727831
keyword: WGS
keyword: RefSeq
source: Microtus ochrogaster (prairie vole)
organism: Microtus ochrogaster
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Arvicolinae; Microtus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001698.1.\nAssembly name: MicOch1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/12/07. The original whole-genome shotgun project has the\naccession AHZW00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: allpaths v. R41985 HAPLOIDIFY=True\n SPRS_WRITE_SEPS=True\nAssembly Name :: MicOch1.0\nGenome Coverage :: 94x\nSequencing Technology :: Illumina Hi-Seq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Microtus ochrogaster Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 18700958
topology: linear
so has quality: SO_0000987
location: 1..18700958
location: region:1-18700958:1
RO_0002162: 79684

NC_022035
type: RefSeq
SIO_000068: refseq

PRJNA210839
type: BioProject
SIO_000068: bioproject

SAMN00727831
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18700958:1
position: 18700958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18700958:1:source
so part of: sequence
organism: Microtus ochrogaster
mol type: genomic DNA
isolate: Prairie Vole_2
sex: female
linkage group: LG10

79684
type: Taxonomy
SIO_000068: taxonomy

Hepacam2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hepacam2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41129..74477)
location: region:41129-74477:-1
so has part: feature:41129-74477:-1:exon
subclass of: SO_0000010

102002688
type: Gene
SIO_000068: ncbigene

position:41129:-1
position: 41129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74477:-1
position: 74477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41129-74477:-1:exon

Hepacam2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hepacam2
product: HEPACAM family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026787548.1
SIO_010081: Hepacam2
subclass of: SO_0000673
so part of: Hepacam2
location: complement(join(41129..41460,47393..47501,49022..49095,50322..50359,50449..50473,50566..50691,59936..60232,70139..70423,74084..74477))
location: region:41129-74477:-1
so has part: feature:74084-74477:-1:exon
so has part: feature:70139-70423:-1:exon
so has part: feature:59936-60232:-1:exon
so has part: feature:50566-50691:-1:exon
so has part: feature:50449-50473:-1:exon
so has part: feature:50322-50359:-1:exon
so has part: feature:49022-49095:-1:exon
so has part: feature:47393-47501:-1:exon
so has part: feature:41129-41460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74084-74477:-1:exon

position:74084:-1
position: 74084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70139-70423:-1:exon

position:70139:-1
position: 70139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70423:-1
position: 70423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59936-60232:-1:exon

position:59936:-1
position: 59936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60232:-1
position: 60232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50566-50691:-1:exon

position:50566:-1
position: 50566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50691:-1
position: 50691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:50449-50473:-1:exon

position:50449:-1
position: 50449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50473:-1
position: 50473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:50322-50359:-1:exon

position:50322:-1
position: 50322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50359:-1
position: 50359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:49022-49095:-1:exon

position:49022:-1
position: 49022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49095:-1
position: 49095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:47393-47501:-1:exon

position:47393:-1
position: 47393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47501:-1
position: 47501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:41129-41460:-1:exon

position:41460:-1
position: 41460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hepacam2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hepacam2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HEPACAM family member 2
translation: MWLRVLTVLFLFVAGVCLGLKVTVPSHTVHGIRGQALYLPVHYGFRTPASGIQIIWLFERLHTMPKYLLGSVNESVVPDLEYQHKFTMMPPNASLLINPLQFTDEGNYIVKVNIQGNGTLSSSQKIQVTVDDPVMKPVVQSHPDSGAVEYVGNITLTCQVKGGTRLVYQWRKNGKPVCINSSHSFSPQNNTLWIVPVTKEDIGNYSCLVSNPVSEVESDVITPTIYYGPYGLQVNSDKGQKLGEVFTVDLGEAILFDCSADSYPPNTYSWIQRSDNTTYVIKHGPRLEVTSENVAQKTADYLCCAYNNMTGRRDEARFTVVITSVGLEKLAQKGKSLSPLASITGISLFLIISMCLLFLWKKYQPYKAIRQKLEGRPESEYRKAQTFSGHEDALGDFGIYEFVAFPDASGIPRMPNRSGPAPDGVTGQDFHGTVYEVIQHIPAQQQDNNTMERRESS
SIO_010081: Hepacam2
subclass of: SO_0000673
so part of: Hepacam2
location: complement(join(41435..41460,47393..47501,49022..49095,50322..50359,50449..50473,50566..50691,59936..60232,70139..70423,74084..74477))
location: region:41435-74477:-1
so has part: feature:74084-74477:-1:exon
so has part: feature:70139-70423:-1:exon
so has part: feature:59936-60232:-1:exon
so has part: feature:50566-50691:-1:exon
so has part: feature:50449-50473:-1:exon
so has part: feature:50322-50359:-1:exon
so has part: feature:49022-49095:-1:exon
so has part: feature:47393-47501:-1:exon
so has part: feature:41435-41460:-1:exon

XP_026643349.1
type: Protein
SIO_000068: ncbiprotein

position:41435:-1
position: 41435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74084-74477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70139-70423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59936-60232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50566-50691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50449-50473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50322-50359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49022-49095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47393-47501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41435-41460:-1:exon

Vps50
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Vps50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86961..194555
location: region:86961-194555:1
so has part: feature:86961-194555:1:exon
subclass of: SO_0000010

101995004
type: Gene
SIO_000068: ncbigene

position:86961:1
position: 86961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194555:1
position: 194555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86961-194555:1:exon

Vps50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Vps50
product: VPS50, EARP/GARPII complex subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005363676.2
SIO_010081: Vps50
subclass of: SO_0000673
so part of: Vps50
location: join(86961..87120,94978..95046,104084..104206,105504..105575,106457..106510,107524..107594,108137..108254,108568..108603,111399..111481,119025..119067,120818..120916,123629..123769,132535..132667,135862..135953,139496..139590,139866..139964,144535..144625,146927..147103,156367..156485,159582..159688,174458..174579,176528..176608,183253..183401,184705..184801,185643..185801,189681..189802,191266..191455,193931..194555)
location: region:86961-194555:1
so has part: feature:86961-87120:1:exon
so has part: feature:94978-95046:1:exon
so has part: feature:104084-104206:1:exon
so has part: feature:105504-105575:1:exon
so has part: feature:106457-106510:1:exon
so has part: feature:107524-107594:1:exon
so has part: feature:108137-108254:1:exon
so has part: feature:108568-108603:1:exon
so has part: feature:111399-111481:1:exon
so has part: feature:119025-119067:1:exon
so has part: feature:120818-120916:1:exon
so has part: feature:123629-123769:1:exon
so has part: feature:132535-132667:1:exon
so has part: feature:135862-135953:1:exon
so has part: feature:139496-139590:1:exon
so has part: feature:139866-139964:1:exon
so has part: feature:144535-144625:1:exon
so has part: feature:146927-147103:1:exon
so has part: feature:156367-156485:1:exon
so has part: feature:159582-159688:1:exon
so has part: feature:174458-174579:1:exon
so has part: feature:176528-176608:1:exon
so has part: feature:183253-183401:1:exon
so has part: feature:184705-184801:1:exon
so has part: feature:185643-185801:1:exon
so has part: feature:189681-189802:1:exon
so has part: feature:191266-191455:1:exon
so has part: feature:193931-194555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86961-87120:1:exon

position:87120:1
position: 87120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94978-95046:1:exon

position:94978:1
position: 94978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95046:1
position: 95046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104084-104206:1:exon

position:104084:1
position: 104084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104206:1
position: 104206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105504-105575:1:exon

position:105504:1
position: 105504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105575:1
position: 105575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106457-106510:1:exon

position:106457:1
position: 106457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106510:1
position: 106510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107524-107594:1:exon

position:107524:1
position: 107524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107594:1
position: 107594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108137-108254:1:exon

position:108137:1
position: 108137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108254:1
position: 108254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108568-108603:1:exon

position:108568:1
position: 108568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108603:1
position: 108603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:111399-111481:1:exon

position:111399:1
position: 111399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111481:1
position: 111481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:119025-119067:1:exon

position:119025:1
position: 119025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119067:1
position: 119067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:120818-120916:1:exon

position:120818:1
position: 120818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120916:1
position: 120916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:123629-123769:1:exon

position:123629:1
position: 123629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123769:1
position: 123769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:132535-132667:1:exon

position:132535:1
position: 132535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132667:1
position: 132667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:135862-135953:1:exon

position:135862:1
position: 135862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135953:1
position: 135953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:139496-139590:1:exon

position:139496:1
position: 139496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139590:1
position: 139590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:139866-139964:1:exon

position:139866:1
position: 139866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139964:1
position: 139964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:144535-144625:1:exon

position:144535:1
position: 144535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144625:1
position: 144625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:146927-147103:1:exon

position:146927:1
position: 146927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147103:1
position: 147103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:156367-156485:1:exon

position:156367:1
position: 156367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156485:1
position: 156485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:159582-159688:1:exon

position:159582:1
position: 159582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159688:1
position: 159688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:174458-174579:1:exon

position:174458:1
position: 174458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174579:1
position: 174579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:176528-176608:1:exon

position:176528:1
position: 176528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176608:1
position: 176608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:183253-183401:1:exon

position:183253:1
position: 183253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183401:1
position: 183401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:184705-184801:1:exon

position:184705:1
position: 184705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184801:1
position: 184801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:185643-185801:1:exon

position:185643:1
position: 185643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185801:1
position: 185801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:189681-189802:1:exon

position:189681:1
position: 189681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189802:1
position: 189802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:191266-191455:1:exon

position:191266:1
position: 191266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191455:1
position: 191455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:193931-194555:1:exon

position:193931:1
position: 193931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Vps50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Vps50
product: VPS50, EARP/GARPII complex subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026787530.1
SIO_010081: Vps50
subclass of: SO_0000673
so part of: Vps50
location: join(86961..87120,94978..95046,104084..104206,105504..105575,106457..106510,107524..107594,108137..108254,108568..108603,111399..111481,119025..119067,120818..120916,123629..123769,124019..124536)
location: region:86961-124536:1
so has part: feature:86961-87120:1:exon
so has part: feature:94978-95046:1:exon
so has part: feature:104084-104206:1:exon
so has part: feature:105504-105575:1:exon
so has part: feature:106457-106510:1:exon
so has part: feature:107524-107594:1:exon
so has part: feature:108137-108254:1:exon
so has part: feature:108568-108603:1:exon
so has part: feature:111399-111481:1:exon
so has part: feature:119025-119067:1:exon
so has part: feature:120818-120916:1:exon
so has part: feature:123629-123769:1:exon
so has part: feature:124019-124536:1:exon

position:124536:1
position: 124536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86961-87120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94978-95046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104084-104206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105504-105575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106457-106510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107524-107594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108137-108254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108568-108603:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111399-111481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119025-119067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:120818-120916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:123629-123769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124019-124536:1:exon

position:124019:1
position: 124019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Vps50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Vps50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syndetin isoform X1
translation: MQKIKSLMTRQGLKSPPESLSDLGAFESLRVPGKEEFRELREQPSDPQVEQELINSIEQVYFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRQLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAENTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMAWHGKHDSEETAAASEGSNVMSTEETNFDRSYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVSRLMQVGEEFCGSKSEVLQESIRKQSINYFKNHHRIRLDELRMFLENETWELCPVKSNFSILQLHEFKFLEQSRSPSVSPSKQPLVTTSKPMTLFEQYCSAGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKQDYVDEQTGDVPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDLEVSTDPTATLTAAEERKEKVPSPHLNQLVILTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFFSQTVSTASELRKPIYWIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNRKLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLIKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKDHREYSAKQLTNLVNVCLGSHINKKARQKLLAAIDDIDRPKR
SIO_010081: Vps50
subclass of: SO_0000673
so part of: Vps50
location: join(87088..87120,94978..95046,104084..104206,105504..105575,106457..106510,107524..107594,108137..108254,108568..108603,111399..111481,119025..119067,120818..120916,123629..123769,132535..132667,135862..135953,139496..139590,139866..139964,144535..144625,146927..147103,156367..156485,159582..159688,174458..174579,176528..176608,183253..183401,184705..184801,185643..185801,189681..189802,191266..191455,193931..194050)
location: region:87088-194050:1
so has part: feature:87088-87120:1:exon
so has part: feature:94978-95046:1:exon
so has part: feature:104084-104206:1:exon
so has part: feature:105504-105575:1:exon
so has part: feature:106457-106510:1:exon
so has part: feature:107524-107594:1:exon
so has part: feature:108137-108254:1:exon
so has part: feature:108568-108603:1:exon
so has part: feature:111399-111481:1:exon
so has part: feature:119025-119067:1:exon
so has part: feature:120818-120916:1:exon
so has part: feature:123629-123769:1:exon
so has part: feature:132535-132667:1:exon
so has part: feature:135862-135953:1:exon
so has part: feature:139496-139590:1:exon
so has part: feature:139866-139964:1:exon
so has part: feature:144535-144625:1:exon
so has part: feature:146927-147103:1:exon
so has part: feature:156367-156485:1:exon
so has part: feature:159582-159688:1:exon
so has part: feature:174458-174579:1:exon
so has part: feature:176528-176608:1:exon
so has part: feature:183253-183401:1:exon
so has part: feature:184705-184801:1:exon
so has part: feature:185643-185801:1:exon
so has part: feature:189681-189802:1:exon
so has part: feature:191266-191455:1:exon
so has part: feature:193931-194050:1:exon

XP_005363733.1
type: Protein
SIO_000068: ncbiprotein

position:87088:1
position: 87088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194050:1
position: 194050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87088-87120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94978-95046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104084-104206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105504-105575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106457-106510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107524-107594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108137-108254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108568-108603:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111399-111481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119025-119067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:120818-120916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:123629-123769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132535-132667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:135862-135953:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139496-139590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:139866-139964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144535-144625:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:146927-147103:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:156367-156485:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:159582-159688:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:174458-174579:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176528-176608:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:183253-183401:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:184705-184801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:185643-185801:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189681-189802:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:191266-191455:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:193931-194050:1:exon

Vps50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Vps50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syndetin isoform X2
translation: MQKIKSLMTRQGLKSPPESLSDLGAFESLRVPGKEEFRELREQPSDPQVEQELINSIEQVYFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRQLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAENTDTKFQKLQYKDLCTVAEQQYHRQKPGISLLLVLLAF
SIO_010081: Vps50
subclass of: SO_0000673
so part of: Vps50
location: join(87088..87120,94978..95046,104084..104206,105504..105575,106457..106510,107524..107594,108137..108254,108568..108603,111399..111481,119025..119067,120818..120916,123629..123769,124019..124087)
location: region:87088-124087:1
so has part: feature:87088-87120:1:exon
so has part: feature:94978-95046:1:exon
so has part: feature:104084-104206:1:exon
so has part: feature:105504-105575:1:exon
so has part: feature:106457-106510:1:exon
so has part: feature:107524-107594:1:exon
so has part: feature:108137-108254:1:exon
so has part: feature:108568-108603:1:exon
so has part: feature:111399-111481:1:exon
so has part: feature:119025-119067:1:exon
so has part: feature:120818-120916:1:exon
so has part: feature:123629-123769:1:exon
so has part: feature:124019-124087:1:exon

XP_026643331.1
type: Protein
SIO_000068: ncbiprotein

position:124087:1
position: 124087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87088-87120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94978-95046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104084-104206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105504-105575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106457-106510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107524-107594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108137-108254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108568-108603:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111399-111481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119025-119067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:120818-120916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:123629-123769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124019-124087:1:exon

LOC102002968
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102002968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(214658..221394)
location: region:214658-221394:-1
so has part: feature:214658-221394:-1:exon

102002968
type: Gene
SIO_000068: ncbigene

position:214658:-1
position: 214658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221394:-1
position: 221394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214658-221394:-1:exon

LOC102002968
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102002968
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102002968
subclass of: SO_0000673
so part of: LOC102002968
location: complement(214658..215402)
location: region:214658-215402:-1
so has part: feature:214658-215402:-1:exon

position:215402:-1
position: 215402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214658-215402:-1:exon

LOC102002968
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102002968
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102002968
subclass of: SO_0000673
so part of: LOC102002968
location: complement(220877..220908)
location: region:220877-220908:-1
so has part: feature:220877-220908:-1:exon

position:220877:-1
position: 220877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220908:-1
position: 220908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220877-220908:-1:exon

LOC102002968
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102002968
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102002968
subclass of: SO_0000673
so part of: LOC102002968
location: complement(221388..221394)
location: region:221388-221394:-1
so has part: feature:221388-221394:-1:exon

position:221388:-1
position: 221388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221388-221394:-1:exon

Calcr
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Calcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(240592..326266)
location: region:240592-326266:-1
so has part: feature:240592-326266:-1:exon
subclass of: SO_0000010

101995289
type: Gene
SIO_000068: ncbigene

position:240592:-1
position: 240592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326266:-1
position: 326266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240592-326266:-1:exon

Calcr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Calcr
product: calcitonin receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_013352429.2
SIO_010081: Calcr
subclass of: SO_0000673
so part of: Calcr
location: complement(join(240592..242629,247122..247163,248496..248714,249460..249526,249608..249668,252587..252740,263767..263893,267040..267131,269057..269169,271481..271591,273102..273255,277352..277430,315930..316037,325841..326022,326199..326266))
location: region:240592-326266:-1
so has part: feature:326199-326266:-1:exon
so has part: feature:325841-326022:-1:exon
so has part: feature:315930-316037:-1:exon
so has part: feature:277352-277430:-1:exon
so has part: feature:273102-273255:-1:exon
so has part: feature:271481-271591:-1:exon
so has part: feature:269057-269169:-1:exon
so has part: feature:267040-267131:-1:exon
so has part: feature:263767-263893:-1:exon
so has part: feature:252587-252740:-1:exon
so has part: feature:249608-249668:-1:exon
so has part: feature:249460-249526:-1:exon
so has part: feature:248496-248714:-1:exon
so has part: feature:247122-247163:-1:exon
so has part: feature:240592-242629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326199-326266:-1:exon

position:326199:-1
position: 326199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325841-326022:-1:exon

position:325841:-1
position: 325841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326022:-1
position: 326022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315930-316037:-1:exon

position:315930:-1
position: 315930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316037:-1
position: 316037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277352-277430:-1:exon

position:277352:-1
position: 277352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277430:-1
position: 277430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273102-273255:-1:exon

position:273102:-1
position: 273102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273255:-1
position: 273255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:271481-271591:-1:exon

position:271481:-1
position: 271481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271591:-1
position: 271591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269057-269169:-1:exon

position:269057:-1
position: 269057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269169:-1
position: 269169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:267040-267131:-1:exon

position:267040:-1
position: 267040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267131:-1
position: 267131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263767-263893:-1:exon

position:263767:-1
position: 263767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263893:-1
position: 263893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:252587-252740:-1:exon

position:252587:-1
position: 252587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252740:-1
position: 252740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:249608-249668:-1:exon

position:249608:-1
position: 249608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249668:-1
position: 249668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:249460-249526:-1:exon

position:249460:-1
position: 249460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249526:-1
position: 249526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:248496-248714:-1:exon

position:248496:-1
position: 248496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248714:-1
position: 248714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:247122-247163:-1:exon

position:247122:-1
position: 247122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247163:-1
position: 247163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:240592-242629:-1:exon

position:242629:-1
position: 242629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Calcr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Calcr
product: calcitonin receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005363677.2
SIO_010081: Calcr
subclass of: SO_0000673
so part of: Calcr
location: complement(join(240592..242629,247122..247163,248496..248714,249460..249526,249608..249668,252587..252740,262720..262827,263767..263893,267040..267131,269057..269169,271481..271591,273102..273255,277352..277430,315930..316037,325841..326022,326199..326266))
location: region:240592-326266:-1
so has part: feature:326199-326266:-1:exon
so has part: feature:325841-326022:-1:exon
so has part: feature:315930-316037:-1:exon
so has part: feature:277352-277430:-1:exon
so has part: feature:273102-273255:-1:exon
so has part: feature:271481-271591:-1:exon
so has part: feature:269057-269169:-1:exon
so has part: feature:267040-267131:-1:exon
so has part: feature:263767-263893:-1:exon
so has part: feature:262720-262827:-1:exon
so has part: feature:252587-252740:-1:exon
so has part: feature:249608-249668:-1:exon
so has part: feature:249460-249526:-1:exon
so has part: feature:248496-248714:-1:exon
so has part: feature:247122-247163:-1:exon
so has part: feature:240592-242629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326199-326266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325841-326022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315930-316037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277352-277430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273102-273255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271481-271591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269057-269169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267040-267131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263767-263893:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262720-262827:-1:exon

position:262720:-1
position: 262720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262827:-1
position: 262827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:252587-252740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:249608-249668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:249460-249526:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248496-248714:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247122-247163:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240592-242629:-1:exon

Calcr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Calcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcitonin receptor isoform X2
translation: MVPRKFKARRGNLRKPRLRFHLVNRFTLLLLLLLNPTPAVQAPTNLSEPSPTNEAFLRTIGRKKLLEAQYGCYDRIQELPPYEGEGLYCNRTWDGWLCWDDTPAGVTAFQNCPDYFPDFDVTEKASKYCDENGEWFRHPDSNRTWSNYTLCNAFTSEKLHNAYALYYLALVGHSLSIAALITSLGIYLFFKSLRCQRVTVHKNMFLTYILNSIIIIIHLVEVVPNGDLVRRDPISCKVLHFFHQYMMACNYFWMLCEGIYLHTLIVVAMFAEEQRLCWYYLLGWGFPVIPTTIHAVTRALYYNDNCWLSVETHLLYIVHGPIMVALVVNFFFLLNIVRVLVTKLRQTHQAETYMYLKAVKATMVLVPLLGIQFVVFPWRPSNKILGKIYDYFMHFLIHFQGFFVATIYCFFNHEVQVAVKRHWAKLKIRWRQRWGRRRRRANNRVVAAPRVTAFAEPGGLPIYICHQEPRNPPVNNNPVQERTEVIPLNVIQEDPSAVPEDSA
SIO_010081: Calcr
subclass of: SO_0000673
so part of: Calcr
location: complement(join(242360..242629,247122..247163,248496..248714,249460..249526,249608..249668,252587..252740,263767..263893,267040..267131,269057..269169,271481..271591,273102..273255,277352..277430,315930..315952))
location: region:242360-315952:-1
so has part: feature:315930-315952:-1:exon
so has part: feature:277352-277430:-1:exon
so has part: feature:273102-273255:-1:exon
so has part: feature:271481-271591:-1:exon
so has part: feature:269057-269169:-1:exon
so has part: feature:267040-267131:-1:exon
so has part: feature:263767-263893:-1:exon
so has part: feature:252587-252740:-1:exon
so has part: feature:249608-249668:-1:exon
so has part: feature:249460-249526:-1:exon
so has part: feature:248496-248714:-1:exon
so has part: feature:247122-247163:-1:exon
so has part: feature:242360-242629:-1:exon

XP_013207883.1
type: Protein
SIO_000068: ncbiprotein

position:242360:-1
position: 242360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315952:-1
position: 315952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315930-315952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277352-277430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273102-273255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271481-271591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269057-269169:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267040-267131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263767-263893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252587-252740:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:249608-249668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249460-249526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:248496-248714:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:247122-247163:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:242360-242629:-1:exon

Calcr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Calcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcitonin receptor isoform X1
translation: MVPRKFKARRGNLRKPRLRFHLVNRFTLLLLLLLNPTPAVQAPTNLSEPSPTNEAFLRTIGRKKLLEAQYGCYDRIQELPPYEGEGLYCNRTWDGWLCWDDTPAGVTAFQNCPDYFPDFDVTEKASKYCDENGEWFRHPDSNRTWSNYTLCNAFTSEKLHNAYALYYLALVGHSLSIAALITSLGIYLFFKSLRCQRVTVHKNMFLTYILNSIIIIIHLVEVVPNGDLVRRDPMQIFHHNTHMWTMRWELSPLLPQSAEGKMDSNNSEVISCKVLHFFHQYMMACNYFWMLCEGIYLHTLIVVAMFAEEQRLCWYYLLGWGFPVIPTTIHAVTRALYYNDNCWLSVETHLLYIVHGPIMVALVVNFFFLLNIVRVLVTKLRQTHQAETYMYLKAVKATMVLVPLLGIQFVVFPWRPSNKILGKIYDYFMHFLIHFQGFFVATIYCFFNHEVQVAVKRHWAKLKIRWRQRWGRRRRRANNRVVAAPRVTAFAEPGGLPIYICHQEPRNPPVNNNPVQERTEVIPLNVIQEDPSAVPEDSA
SIO_010081: Calcr
subclass of: SO_0000673
so part of: Calcr
location: complement(join(242360..242629,247122..247163,248496..248714,249460..249526,249608..249668,252587..252740,262720..262827,263767..263893,267040..267131,269057..269169,271481..271591,273102..273255,277352..277430,315930..315952))
location: region:242360-315952:-1
so has part: feature:315930-315952:-1:exon
so has part: feature:277352-277430:-1:exon
so has part: feature:273102-273255:-1:exon
so has part: feature:271481-271591:-1:exon
so has part: feature:269057-269169:-1:exon
so has part: feature:267040-267131:-1:exon
so has part: feature:263767-263893:-1:exon
so has part: feature:262720-262827:-1:exon
so has part: feature:252587-252740:-1:exon
so has part: feature:249608-249668:-1:exon
so has part: feature:249460-249526:-1:exon
so has part: feature:248496-248714:-1:exon
so has part: feature:247122-247163:-1:exon
so has part: feature:242360-242629:-1:exon

XP_005363734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315930-315952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277352-277430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273102-273255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271481-271591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269057-269169:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267040-267131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263767-263893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262720-262827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252587-252740:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249608-249668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:249460-249526:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248496-248714:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247122-247163:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:242360-242629:-1:exon

LOC113457926
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 326339..366713
location: region:326339-366713:1
so has part: feature:326339-366713:1:exon
subclass of: SO_0000011

113457926
type: Gene
SIO_000068: ncbigene

position:326339:1
position: 326339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366713:1
position: 366713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326339-366713:1:exon

LOC113457926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457926
product: uncharacterized LOC113457926
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003378393.1
SIO_010081: LOC113457926
subclass of: SO_0000673
so part of: LOC113457926
location: join(326339..326648,355239..355266,365515..365555,366297..366713)
location: region:326339-366713:1
so has part: feature:326339-326648:1:exon
so has part: feature:355239-355266:1:exon
so has part: feature:365515-365555:1:exon
so has part: feature:366297-366713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326339-326648:1:exon

position:326648:1
position: 326648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:355239-355266:1:exon

position:355239:1
position: 355239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355266:1
position: 355266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365515-365555:1:exon

position:365515:1
position: 365515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365555:1
position: 365555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366297-366713:1:exon

position:366297:1
position: 366297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101979140
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 391973..393047
location: region:391973-393047:1
so has part: feature:391973-393047:1:exon

101979140
type: Gene
SIO_000068: ncbigene

position:391973:1
position: 391973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393047:1
position: 393047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391973-393047:1:exon

LOC101979140
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979140
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101979140
subclass of: SO_0000673
so part of: LOC101979140
location: 391973..393047
location: region:391973-393047:1
so has part: feature:391973-393047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391973-393047:1:exon

Tfpi2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tfpi2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(558477..563996)
location: region:558477-563996:-1
so has part: feature:558477-563996:-1:exon
subclass of: SO_0000010

101995583
type: Gene
SIO_000068: ncbigene

position:558477:-1
position: 558477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563996:-1
position: 563996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558477-563996:-1:exon

Tfpi2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tfpi2
product: tissue factor pathway inhibitor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005363678.2
SIO_010081: Tfpi2
subclass of: SO_0000673
so part of: Tfpi2
location: complement(join(558477..559167,559533..559703,561156..561335,563430..563612,563813..563996))
location: region:558477-563996:-1
so has part: feature:563813-563996:-1:exon
so has part: feature:563430-563612:-1:exon
so has part: feature:561156-561335:-1:exon
so has part: feature:559533-559703:-1:exon
so has part: feature:558477-559167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563813-563996:-1:exon

position:563813:-1
position: 563813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563430-563612:-1:exon

position:563430:-1
position: 563430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563612:-1
position: 563612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561156-561335:-1:exon

position:561156:-1
position: 561156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561335:-1
position: 561335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:559533-559703:-1:exon

position:559533:-1
position: 559533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559703:-1
position: 559703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:558477-559167:-1:exon

position:559167:-1
position: 559167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tfpi2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tfpi2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue factor pathway inhibitor 2
translation: MDPAMPLRLWLLPLLLVGSARGLASASAQGNNLEICLLPLERGPCRALLPRFYYDRNRQRCRKFKYGGCLGNANNFHSMDLCEHTCGDIEKVPPVCRLELKTYPCDKRHLQYFFNLNTMTCEPLSFHRCSKSLNIFPDENTCKKRCEPSKIPSFCSSPKDEGLCSANITRYYFNSRNKACETFTYTGCGGNENNFYYLEDCDRVCVKAPKKPKKRKTGSGFRIRTKPRRWTPRLNHSLILEETNHQ
SIO_010081: Tfpi2
subclass of: SO_0000673
so part of: Tfpi2
location: complement(join(559049..559167,559533..559703,561156..561335,563430..563612,563813..563900))
location: region:559049-563900:-1
so has part: feature:563813-563900:-1:exon
so has part: feature:563430-563612:-1:exon
so has part: feature:561156-561335:-1:exon
so has part: feature:559533-559703:-1:exon
so has part: feature:559049-559167:-1:exon

XP_005363735.1
type: Protein
SIO_000068: ncbiprotein

position:559049:-1
position: 559049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563900:-1
position: 563900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563813-563900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563430-563612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561156-561335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559533-559703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559049-559167:-1:exon

Gngt1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gngt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 586132..589082
location: region:586132-589082:1
so has part: feature:586132-589082:1:exon
subclass of: SO_0000010

101995875
type: Gene
SIO_000068: ncbigene

position:586132:1
position: 586132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589082:1
position: 589082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586132-589082:1:exon

Gngt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gngt1
product: G protein subunit gamma transducin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_026787508.1
SIO_010081: Gngt1
subclass of: SO_0000673
so part of: Gngt1
location: join(586132..586227,588954..589082)
location: region:586132-589082:1
so has part: feature:586132-586227:1:exon
so has part: feature:588954-589082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586132-586227:1:exon

position:586227:1
position: 586227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:588954-589082:1:exon

position:588954:1
position: 588954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gngt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gngt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(T) subunit gamma-T1
translation: MPVINIEDLTEKDKLKMEVDQLKKEVTLERMMVSKCCEEVRDYVEERSGEDPLVKGIPEDKNPFKELKGGCVIS
SIO_010081: Gngt1
subclass of: SO_0000673
so part of: Gngt1
location: join(586132..586227,588954..589082)
location: region:586132-589082:1
so has part: feature:586132-586227:1:exon
so has part: feature:588954-589082:1:exon

XP_026643309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586132-586227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:588954-589082:1:exon

Gng11
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gng11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 595472..600495
location: region:595472-600495:1
so has part: feature:595472-600495:1:exon
subclass of: SO_0000010

101996161
type: Gene
SIO_000068: ncbigene

position:595472:1
position: 595472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600495:1
position: 600495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595472-600495:1:exon

Gng11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gng11
product: G protein subunit gamma 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_005363680.1
SIO_010081: Gng11
subclass of: SO_0000673
so part of: Gng11
location: join(595472..595970,600071..600495)
location: region:595472-600495:1
so has part: feature:595472-595970:1:exon
so has part: feature:600071-600495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:595472-595970:1:exon

position:595970:1
position: 595970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600071-600495:1:exon

position:600071:1
position: 600071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gng11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gng11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11
translation: MPALHIEDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVIS
SIO_010081: Gng11
subclass of: SO_0000673
so part of: Gng11
location: join(595875..595970,600071..600196)
location: region:595875-600196:1
so has part: feature:595875-595970:1:exon
so has part: feature:600071-600196:1:exon

XP_005363737.1
type: Protein
SIO_000068: ncbiprotein

position:595875:1
position: 595875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600196:1
position: 600196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595875-595970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600071-600196:1:exon

Bet1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Bet1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(674635..685039)
location: region:674635-685039:-1
so has part: feature:674635-685039:-1:exon
subclass of: SO_0000010

101996446
type: Gene
SIO_000068: ncbigene

position:674635:-1
position: 674635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685039:-1
position: 685039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674635-685039:-1:exon

Bet1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bet1
product: Bet1 golgi vesicular membrane trafficking protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_005363681.3
SIO_010081: Bet1
subclass of: SO_0000673
so part of: Bet1
location: complement(join(674635..675770,677413..677469,679962..680086,684850..685039))
location: region:674635-685039:-1
so has part: feature:684850-685039:-1:exon
so has part: feature:679962-680086:-1:exon
so has part: feature:677413-677469:-1:exon
so has part: feature:674635-675770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684850-685039:-1:exon

position:684850:-1
position: 684850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:679962-680086:-1:exon

position:679962:-1
position: 679962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680086:-1
position: 680086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:677413-677469:-1:exon

position:677413:-1
position: 677413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677469:-1
position: 677469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:674635-675770:-1:exon

position:675770:-1
position: 675770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bet1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bet1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BET1 homolog
translation: MRRAGLGDGAAPGSYGNYGYASSGYNACEEENDRLTESLRSKVDAIKSLSIEIGHEVRNQNKLLSEMDSQFDSTTGFLGKTMGRLKILSRGSQTKLLCYMMLFSLFVFFVIYWIMKLR
SIO_010081: Bet1
subclass of: SO_0000673
so part of: Bet1
location: complement(join(675615..675770,677413..677469,679962..680086,684850..684868))
location: region:675615-684868:-1
so has part: feature:684850-684868:-1:exon
so has part: feature:679962-680086:-1:exon
so has part: feature:677413-677469:-1:exon
so has part: feature:675615-675770:-1:exon

XP_005363738.1
type: Protein
SIO_000068: ncbiprotein

position:675615:-1
position: 675615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684868:-1
position: 684868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684850-684868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679962-680086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677413-677469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675615-675770:-1:exon

Col1a2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Col1a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1106191..1141660
location: region:1106191-1141660:1
so has part: feature:1106191-1141660:1:exon
subclass of: SO_0000010

101996726
type: Gene
SIO_000068: ncbigene

position:1106191:1
position: 1106191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141660:1
position: 1141660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106191-1141660:1:exon

Col1a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Col1a2
product: collagen type I alpha 2 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005363682.3
SIO_010081: Col1a2
subclass of: SO_0000673
so part of: Col1a2
location: join(1106191..1106209,1106551..1106758,1109165..1109175,1109785..1109799,1110444..1110479,1111509..1111610,1112741..1112794,1115548..1115592,1115762..1115815,1115908..1115961,1116246..1116299,1116591..1116644,1117113..1117166,1118667..1118711,1118982..1119035,1119138..1119182,1119464..1119517,1120129..1120227,1120348..1120392,1120506..1120604,1120970..1121023,1121143..1121250,1121599..1121652,1121763..1121861,1122782..1122835,1123296..1123394,1124073..1124126,1124612..1124665,1125044..1125097,1125356..1125409,1126368..1126412,1127519..1127617,1128729..1128836,1129478..1129531,1130689..1130742,1131478..1131531,1131630..1131683,1131765..1131872,1132500..1132553,1133505..1133558,1134500..1134661,1135324..1135431,1136090..1136197,1136553..1136606,1136694..1136801,1136920..1136973,1137320..1137427,1137912..1137965,1138090..1138197,1138520..1138778,1139359..1139543,1140186..1140428,1141174..1141660)
location: region:1106191-1141660:1
so has part: feature:1106191-1106209:1:exon
so has part: feature:1106551-1106758:1:exon
so has part: feature:1109165-1109175:1:exon
so has part: feature:1109785-1109799:1:exon
so has part: feature:1110444-1110479:1:exon
so has part: feature:1111509-1111610:1:exon
so has part: feature:1112741-1112794:1:exon
so has part: feature:1115548-1115592:1:exon
so has part: feature:1115762-1115815:1:exon
so has part: feature:1115908-1115961:1:exon
so has part: feature:1116246-1116299:1:exon
so has part: feature:1116591-1116644:1:exon
so has part: feature:1117113-1117166:1:exon
so has part: feature:1118667-1118711:1:exon
so has part: feature:1118982-1119035:1:exon
so has part: feature:1119138-1119182:1:exon
so has part: feature:1119464-1119517:1:exon
so has part: feature:1120129-1120227:1:exon
so has part: feature:1120348-1120392:1:exon
so has part: feature:1120506-1120604:1:exon
so has part: feature:1120970-1121023:1:exon
so has part: feature:1121143-1121250:1:exon
so has part: feature:1121599-1121652:1:exon
so has part: feature:1121763-1121861:1:exon
so has part: feature:1122782-1122835:1:exon
so has part: feature:1123296-1123394:1:exon
so has part: feature:1124073-1124126:1:exon
so has part: feature:1124612-1124665:1:exon
so has part: feature:1125044-1125097:1:exon
so has part: feature:1125356-1125409:1:exon
so has part: feature:1126368-1126412:1:exon
so has part: feature:1127519-1127617:1:exon
so has part: feature:1128729-1128836:1:exon
so has part: feature:1129478-1129531:1:exon
so has part: feature:1130689-1130742:1:exon
so has part: feature:1131478-1131531:1:exon
so has part: feature:1131630-1131683:1:exon
so has part: feature:1131765-1131872:1:exon
so has part: feature:1132500-1132553:1:exon
so has part: feature:1133505-1133558:1:exon
so has part: feature:1134500-1134661:1:exon
so has part: feature:1135324-1135431:1:exon
so has part: feature:1136090-1136197:1:exon
so has part: feature:1136553-1136606:1:exon
so has part: feature:1136694-1136801:1:exon
so has part: feature:1136920-1136973:1:exon
so has part: feature:1137320-1137427:1:exon
so has part: feature:1137912-1137965:1:exon
so has part: feature:1138090-1138197:1:exon
so has part: feature:1138520-1138778:1:exon
so has part: feature:1139359-1139543:1:exon
so has part: feature:1140186-1140428:1:exon
so has part: feature:1141174-1141660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1106191-1106209:1:exon

position:1106209:1
position: 1106209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106551-1106758:1:exon

position:1106551:1
position: 1106551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106758:1
position: 1106758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1109165-1109175:1:exon

position:1109165:1
position: 1109165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109175:1
position: 1109175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1109785-1109799:1:exon

position:1109785:1
position: 1109785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109799:1
position: 1109799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1110444-1110479:1:exon

position:1110444:1
position: 1110444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110479:1
position: 1110479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1111509-1111610:1:exon

position:1111509:1
position: 1111509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111610:1
position: 1111610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1112741-1112794:1:exon

position:1112741:1
position: 1112741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112794:1
position: 1112794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1115548-1115592:1:exon

position:1115548:1
position: 1115548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115592:1
position: 1115592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1115762-1115815:1:exon

position:1115762:1
position: 1115762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115815:1
position: 1115815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1115908-1115961:1:exon

position:1115908:1
position: 1115908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115961:1
position: 1115961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1116246-1116299:1:exon

position:1116246:1
position: 1116246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116299:1
position: 1116299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1116591-1116644:1:exon

position:1116591:1
position: 1116591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116644:1
position: 1116644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1117113-1117166:1:exon

position:1117113:1
position: 1117113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117166:1
position: 1117166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1118667-1118711:1:exon

position:1118667:1
position: 1118667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118711:1
position: 1118711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1118982-1119035:1:exon

position:1118982:1
position: 1118982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119035:1
position: 1119035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1119138-1119182:1:exon

position:1119138:1
position: 1119138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119182:1
position: 1119182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1119464-1119517:1:exon

position:1119464:1
position: 1119464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119517:1
position: 1119517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1120129-1120227:1:exon

position:1120129:1
position: 1120129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120227:1
position: 1120227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1120348-1120392:1:exon

position:1120348:1
position: 1120348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120392:1
position: 1120392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1120506-1120604:1:exon

position:1120506:1
position: 1120506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120604:1
position: 1120604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1120970-1121023:1:exon

position:1120970:1
position: 1120970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121023:1
position: 1121023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1121143-1121250:1:exon

position:1121143:1
position: 1121143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121250:1
position: 1121250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1121599-1121652:1:exon

position:1121599:1
position: 1121599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121652:1
position: 1121652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1121763-1121861:1:exon

position:1121763:1
position: 1121763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121861:1
position: 1121861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1122782-1122835:1:exon

position:1122782:1
position: 1122782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122835:1
position: 1122835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1123296-1123394:1:exon

position:1123296:1
position: 1123296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123394:1
position: 1123394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1124073-1124126:1:exon

position:1124073:1
position: 1124073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124126:1
position: 1124126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1124612-1124665:1:exon

position:1124612:1
position: 1124612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124665:1
position: 1124665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1125044-1125097:1:exon

position:1125044:1
position: 1125044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125097:1
position: 1125097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1125356-1125409:1:exon

position:1125356:1
position: 1125356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125409:1
position: 1125409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1126368-1126412:1:exon

position:1126368:1
position: 1126368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126412:1
position: 1126412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1127519-1127617:1:exon

position:1127519:1
position: 1127519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127617:1
position: 1127617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1128729-1128836:1:exon

position:1128729:1
position: 1128729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128836:1
position: 1128836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1129478-1129531:1:exon

position:1129478:1
position: 1129478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129531:1
position: 1129531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1130689-1130742:1:exon

position:1130689:1
position: 1130689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130742:1
position: 1130742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1131478-1131531:1:exon

position:1131478:1
position: 1131478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131531:1
position: 1131531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1131630-1131683:1:exon

position:1131630:1
position: 1131630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131683:1
position: 1131683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1131765-1131872:1:exon

position:1131765:1
position: 1131765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131872:1
position: 1131872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1132500-1132553:1:exon

position:1132500:1
position: 1132500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132553:1
position: 1132553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1133505-1133558:1:exon

position:1133505:1
position: 1133505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133558:1
position: 1133558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1134500-1134661:1:exon

position:1134500:1
position: 1134500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134661:1
position: 1134661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1135324-1135431:1:exon

position:1135324:1
position: 1135324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135431:1
position: 1135431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1136090-1136197:1:exon

position:1136090:1
position: 1136090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136197:1
position: 1136197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1136553-1136606:1:exon

position:1136553:1
position: 1136553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136606:1
position: 1136606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1136694-1136801:1:exon

position:1136694:1
position: 1136694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136801:1
position: 1136801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1136920-1136973:1:exon

position:1136920:1
position: 1136920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136973:1
position: 1136973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1137320-1137427:1:exon

position:1137320:1
position: 1137320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137427:1
position: 1137427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1137912-1137965:1:exon

position:1137912:1
position: 1137912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137965:1
position: 1137965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1138090-1138197:1:exon

position:1138090:1
position: 1138090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138197:1
position: 1138197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1138520-1138778:1:exon

position:1138520:1
position: 1138520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138778:1
position: 1138778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1139359-1139543:1:exon

position:1139359:1
position: 1139359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139543:1
position: 1139543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1140186-1140428:1:exon

position:1140186:1
position: 1140186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140428:1
position: 1140428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1141174-1141660:1:exon

position:1141174:1
position: 1141174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Col1a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Col1a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(I) chain
translation: MLSFVNTRTLLLLAVTSCLATCQSLQEEYARKGPTGDRGPRGERGPAGPRGRDGADGPPGPPGPPGPPGPPGPPGLGGKFAAQYLDKGVSSGPGPMGLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPSGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPPGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSSGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGPIGPAGARGEAGNIGFPGPKGPSGDPGKAGDKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGSAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPVGSRGPSGAPGPDGNKGEAGAVGAPGTAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGVVGPAGPVGAAGPSGPNGPPGPAGGRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGETGASGPPGFAGEKGPSGEPGTAGPPGTPGPQGFLGPPGILGLPGSRGERGLPGVAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGAPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGTVGPAGKHGNRGEPGPAGSVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGFKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPVGKDGRSGHPGPVGPAGVRGSQGSQGPAGPPGPPGPPGPPGASGGGYDFGFEGDFYRADQPRSQPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWNSDYYWIDPNQGCTMDAIKVFCDFSTGETCIKAQPVNMPAKSSYSSAQGNKHIWLGETINGGSQFEYNMEGVTSKEMATQLAFMRLLANRASQNITYHCKNSIAYLDEETGRLNKAVVLQGSNDVELVAEGNSRFTYTVLVDGCSKKRNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFSVDVGPVCFK
SIO_010081: Col1a2
subclass of: SO_0000673
so part of: Col1a2
location: join(1106689..1106758,1109165..1109175,1109785..1109799,1110444..1110479,1111509..1111610,1112741..1112794,1115548..1115592,1115762..1115815,1115908..1115961,1116246..1116299,1116591..1116644,1117113..1117166,1118667..1118711,1118982..1119035,1119138..1119182,1119464..1119517,1120129..1120227,1120348..1120392,1120506..1120604,1120970..1121023,1121143..1121250,1121599..1121652,1121763..1121861,1122782..1122835,1123296..1123394,1124073..1124126,1124612..1124665,1125044..1125097,1125356..1125409,1126368..1126412,1127519..1127617,1128729..1128836,1129478..1129531,1130689..1130742,1131478..1131531,1131630..1131683,1131765..1131872,1132500..1132553,1133505..1133558,1134500..1134661,1135324..1135431,1136090..1136197,1136553..1136606,1136694..1136801,1136920..1136973,1137320..1137427,1137912..1137965,1138090..1138197,1138520..1138778,1139359..1139543,1140186..1140428,1141174..1141320)
location: region:1106689-1141320:1
so has part: feature:1106689-1106758:1:exon
so has part: feature:1109165-1109175:1:exon
so has part: feature:1109785-1109799:1:exon
so has part: feature:1110444-1110479:1:exon
so has part: feature:1111509-1111610:1:exon
so has part: feature:1112741-1112794:1:exon
so has part: feature:1115548-1115592:1:exon
so has part: feature:1115762-1115815:1:exon
so has part: feature:1115908-1115961:1:exon
so has part: feature:1116246-1116299:1:exon
so has part: feature:1116591-1116644:1:exon
so has part: feature:1117113-1117166:1:exon
so has part: feature:1118667-1118711:1:exon
so has part: feature:1118982-1119035:1:exon
so has part: feature:1119138-1119182:1:exon
so has part: feature:1119464-1119517:1:exon
so has part: feature:1120129-1120227:1:exon
so has part: feature:1120348-1120392:1:exon
so has part: feature:1120506-1120604:1:exon
so has part: feature:1120970-1121023:1:exon
so has part: feature:1121143-1121250:1:exon
so has part: feature:1121599-1121652:1:exon
so has part: feature:1121763-1121861:1:exon
so has part: feature:1122782-1122835:1:exon
so has part: feature:1123296-1123394:1:exon
so has part: feature:1124073-1124126:1:exon
so has part: feature:1124612-1124665:1:exon
so has part: feature:1125044-1125097:1:exon
so has part: feature:1125356-1125409:1:exon
so has part: feature:1126368-1126412:1:exon
so has part: feature:1127519-1127617:1:exon
so has part: feature:1128729-1128836:1:exon
so has part: feature:1129478-1129531:1:exon
so has part: feature:1130689-1130742:1:exon
so has part: feature:1131478-1131531:1:exon
so has part: feature:1131630-1131683:1:exon
so has part: feature:1131765-1131872:1:exon
so has part: feature:1132500-1132553:1:exon
so has part: feature:1133505-1133558:1:exon
so has part: feature:1134500-1134661:1:exon
so has part: feature:1135324-1135431:1:exon
so has part: feature:1136090-1136197:1:exon
so has part: feature:1136553-1136606:1:exon
so has part: feature:1136694-1136801:1:exon
so has part: feature:1136920-1136973:1:exon
so has part: feature:1137320-1137427:1:exon
so has part: feature:1137912-1137965:1:exon
so has part: feature:1138090-1138197:1:exon
so has part: feature:1138520-1138778:1:exon
so has part: feature:1139359-1139543:1:exon
so has part: feature:1140186-1140428:1:exon
so has part: feature:1141174-1141320:1:exon

XP_005363739.1
type: Protein
SIO_000068: ncbiprotein

position:1106689:1
position: 1106689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141320:1
position: 1141320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106689-1106758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109165-1109175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1109785-1109799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1110444-1110479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1111509-1111610:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1112741-1112794:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1115548-1115592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115762-1115815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115908-1115961:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1116246-1116299:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1116591-1116644:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1117113-1117166:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1118667-1118711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1118982-1119035:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1119138-1119182:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1119464-1119517:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1120129-1120227:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1120348-1120392:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1120506-1120604:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1120970-1121023:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1121143-1121250:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1121599-1121652:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1121763-1121861:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1122782-1122835:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1123296-1123394:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1124073-1124126:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1124612-1124665:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1125044-1125097:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1125356-1125409:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1126368-1126412:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1127519-1127617:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1128729-1128836:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1129478-1129531:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1130689-1130742:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1131478-1131531:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1131630-1131683:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1131765-1131872:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1132500-1132553:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1133505-1133558:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1134500-1134661:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1135324-1135431:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1136090-1136197:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1136553-1136606:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1136694-1136801:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1136920-1136973:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1137320-1137427:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1137912-1137965:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1138090-1138197:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1138520-1138778:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1139359-1139543:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1140186-1140428:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1141174-1141320:1:exon

LOC101979427
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1178542..1179315
location: region:1178542-1179315:1
so has part: feature:1178542-1179315:1:exon

101979427
type: Gene
SIO_000068: ncbigene

position:1178542:1
position: 1178542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179315:1
position: 1179315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178542-1179315:1:exon

LOC101979427
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC101979427
subclass of: SO_0000673
so part of: LOC101979427
location: 1178542..1179315
location: region:1178542-1179315:1
so has part: feature:1178542-1179315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178542-1179315:1:exon

Casd1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Casd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1210269..1245700
location: region:1210269-1245700:1
so has part: feature:1210269-1245700:1:exon
subclass of: SO_0000010

101979705
type: Gene
SIO_000068: ncbigene

position:1210269:1
position: 1210269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245700:1
position: 1245700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210269-1245700:1:exon

Casd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Casd1
product: CAS1 domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_026787531.1
SIO_010081: Casd1
subclass of: SO_0000673
so part of: Casd1
location: join(1210269..1210393,1210923..1211043,1214784..1214828,1216165..1216227,1219684..1219728,1220150..1220273,1221406..1221620,1224522..1224944,1225935..1226024,1231678..1231797,1232765..1232921,1234171..1234250,1236417..1236518,1238091..1238231,1238725..1238802,1243331..1243423,1244263..1245700)
location: region:1210269-1245700:1
so has part: feature:1210269-1210393:1:exon
so has part: feature:1210923-1211043:1:exon
so has part: feature:1214784-1214828:1:exon
so has part: feature:1216165-1216227:1:exon
so has part: feature:1219684-1219728:1:exon
so has part: feature:1220150-1220273:1:exon
so has part: feature:1221406-1221620:1:exon
so has part: feature:1224522-1224944:1:exon
so has part: feature:1225935-1226024:1:exon
so has part: feature:1231678-1231797:1:exon
so has part: feature:1232765-1232921:1:exon
so has part: feature:1234171-1234250:1:exon
so has part: feature:1236417-1236518:1:exon
so has part: feature:1238091-1238231:1:exon
so has part: feature:1238725-1238802:1:exon
so has part: feature:1243331-1243423:1:exon
so has part: feature:1244263-1245700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1210269-1210393:1:exon

position:1210393:1
position: 1210393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210923-1211043:1:exon

position:1210923:1
position: 1210923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211043:1
position: 1211043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1214784-1214828:1:exon

position:1214784:1
position: 1214784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214828:1
position: 1214828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1216165-1216227:1:exon

position:1216165:1
position: 1216165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216227:1
position: 1216227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1219684-1219728:1:exon

position:1219684:1
position: 1219684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219728:1
position: 1219728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1220150-1220273:1:exon

position:1220150:1
position: 1220150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220273:1
position: 1220273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1221406-1221620:1:exon

position:1221406:1
position: 1221406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221620:1
position: 1221620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1224522-1224944:1:exon

position:1224522:1
position: 1224522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224944:1
position: 1224944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1225935-1226024:1:exon

position:1225935:1
position: 1225935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226024:1
position: 1226024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1231678-1231797:1:exon

position:1231678:1
position: 1231678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231797:1
position: 1231797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1232765-1232921:1:exon

position:1232765:1
position: 1232765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232921:1
position: 1232921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1234171-1234250:1:exon

position:1234171:1
position: 1234171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234250:1
position: 1234250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1236417-1236518:1:exon

position:1236417:1
position: 1236417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236518:1
position: 1236518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1238091-1238231:1:exon

position:1238091:1
position: 1238091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238231:1
position: 1238231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1238725-1238802:1:exon

position:1238725:1
position: 1238725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238802:1
position: 1238802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1243331-1243423:1:exon

position:1243331:1
position: 1243331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243423:1
position: 1243423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1244263-1245700:1:exon

position:1244263:1
position: 1244263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Casd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Casd1
product: CAS1 domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026787532.1
SIO_010081: Casd1
subclass of: SO_0000673
so part of: Casd1
location: join(1210269..1210393,1210923..1211043,1214784..1214828,1216165..1216227,1220150..1220273,1221406..1221620,1224522..1224944,1225935..1226024,1231678..1231797,1232765..1232921,1234171..1234250,1236417..1236518,1238091..1238231,1238725..1238802,1243331..1243423,1244263..1245700)
location: region:1210269-1245700:1
so has part: feature:1210269-1210393:1:exon
so has part: feature:1210923-1211043:1:exon
so has part: feature:1214784-1214828:1:exon
so has part: feature:1216165-1216227:1:exon
so has part: feature:1220150-1220273:1:exon
so has part: feature:1221406-1221620:1:exon
so has part: feature:1224522-1224944:1:exon
so has part: feature:1225935-1226024:1:exon
so has part: feature:1231678-1231797:1:exon
so has part: feature:1232765-1232921:1:exon
so has part: feature:1234171-1234250:1:exon
so has part: feature:1236417-1236518:1:exon
so has part: feature:1238091-1238231:1:exon
so has part: feature:1238725-1238802:1:exon
so has part: feature:1243331-1243423:1:exon
so has part: feature:1244263-1245700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1210269-1210393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210923-1211043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214784-1214828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1216165-1216227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220150-1220273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1221406-1221620:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1224522-1224944:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225935-1226024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231678-1231797:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1232765-1232921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1234171-1234250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1236417-1236518:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238091-1238231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1238725-1238802:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243331-1243423:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1244263-1245700:1:exon

Casd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Casd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylneuraminate 9-O-acetyltransferase isoform X1
translation: MMHKYKMSEAKNCLVDKHIAFIGDSRIRQLFYSFVKIINPQFKEEGNKHENIPFEDKTASVKVDFLWHPEVNGSMKQCIKVWTEDSVAKPHVIVAGAATWSIKIHNGSEEALAQYRMNITSIAPLLEKLAKTSDVYWVLQDPVYEDLLSENRKMITNEKIDAYNEVAVSILNSSARNSKSNVKLFSVSKLIAQETIMESLDGLHLPESSRETSAMILMNVYCNKVLKPVDGSCCQPRPPLTLIQKLAACFFTLSIIGYLIFYAIHRNAHRKNKPCTDLESGEEKKTLLNTPVSSLETLLQSFCKLGLIMAYFYMCDRANLFMKENKFYTHSSFFIPIIYILVLGIFYNENTKETKVLNREQTDEWKGWMQLVILIYHISGASTFLPVYMHIRVLVAAYLFQTGYGHFSYFWVKGDFGIHRVCQVLFRLNFLVVVLCIVMDRPYQFYYFVPLVTVWFMVIYVTLALWPQIIQKKANGNCLWHLGLLLKLAFLLLCICFLAYSQGAFEKIFSLWPLSKCFELNGNVHEWWFRWRLDRYVVFHGMLFAFIYLALQRRQILSEGKGEPLFSNKISNFLLFISVVSFLTYSIWASSCKNKAECNELHPSVSVVQIVAFILIRNIPGYARSVYSSFFAWFGKISLELFICQYHIWLAADTRGILVLIPGNPTLNIIVSTFIFVCVAHEISQITTDLAQVLIPKDNPSLLRRLACTVAFFCGLLLLSSVQDK
SIO_010081: Casd1
subclass of: SO_0000673
so part of: Casd1
location: join(1210371..1210393,1210923..1211043,1214784..1214828,1216165..1216227,1219684..1219728,1220150..1220273,1221406..1221620,1224522..1224944,1225935..1226024,1231678..1231797,1232765..1232921,1234171..1234250,1236417..1236518,1238091..1238231,1238725..1238802,1243331..1243423,1244263..1244520)
location: region:1210371-1244520:1
so has part: feature:1210371-1210393:1:exon
so has part: feature:1210923-1211043:1:exon
so has part: feature:1214784-1214828:1:exon
so has part: feature:1216165-1216227:1:exon
so has part: feature:1219684-1219728:1:exon
so has part: feature:1220150-1220273:1:exon
so has part: feature:1221406-1221620:1:exon
so has part: feature:1224522-1224944:1:exon
so has part: feature:1225935-1226024:1:exon
so has part: feature:1231678-1231797:1:exon
so has part: feature:1232765-1232921:1:exon
so has part: feature:1234171-1234250:1:exon
so has part: feature:1236417-1236518:1:exon
so has part: feature:1238091-1238231:1:exon
so has part: feature:1238725-1238802:1:exon
so has part: feature:1243331-1243423:1:exon
so has part: feature:1244263-1244520:1:exon

XP_026643332.1
type: Protein
SIO_000068: ncbiprotein

position:1210371:1
position: 1210371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244520:1
position: 1244520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210371-1210393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210923-1211043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214784-1214828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1216165-1216227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1219684-1219728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220150-1220273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221406-1221620:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1224522-1224944:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1225935-1226024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231678-1231797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232765-1232921:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1234171-1234250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1236417-1236518:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1238091-1238231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1238725-1238802:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1243331-1243423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1244263-1244520:1:exon

Casd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Casd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylneuraminate 9-O-acetyltransferase isoform X2
translation: MMHKYKMSEAKNCLVDKHIAFIGDSRIRQLFYSFVKIINPQFKEEGNKHENIPFEDKTASVKVDFLWHPEVNGSMKQCIKVWTEWSIKIHNGSEEALAQYRMNITSIAPLLEKLAKTSDVYWVLQDPVYEDLLSENRKMITNEKIDAYNEVAVSILNSSARNSKSNVKLFSVSKLIAQETIMESLDGLHLPESSRETSAMILMNVYCNKVLKPVDGSCCQPRPPLTLIQKLAACFFTLSIIGYLIFYAIHRNAHRKNKPCTDLESGEEKKTLLNTPVSSLETLLQSFCKLGLIMAYFYMCDRANLFMKENKFYTHSSFFIPIIYILVLGIFYNENTKETKVLNREQTDEWKGWMQLVILIYHISGASTFLPVYMHIRVLVAAYLFQTGYGHFSYFWVKGDFGIHRVCQVLFRLNFLVVVLCIVMDRPYQFYYFVPLVTVWFMVIYVTLALWPQIIQKKANGNCLWHLGLLLKLAFLLLCICFLAYSQGAFEKIFSLWPLSKCFELNGNVHEWWFRWRLDRYVVFHGMLFAFIYLALQRRQILSEGKGEPLFSNKISNFLLFISVVSFLTYSIWASSCKNKAECNELHPSVSVVQIVAFILIRNIPGYARSVYSSFFAWFGKISLELFICQYHIWLAADTRGILVLIPGNPTLNIIVSTFIFVCVAHEISQITTDLAQVLIPKDNPSLLRRLACTVAFFCGLLLLSSVQDK
SIO_010081: Casd1
subclass of: SO_0000673
so part of: Casd1
location: join(1210371..1210393,1210923..1211043,1214784..1214828,1216165..1216227,1220150..1220273,1221406..1221620,1224522..1224944,1225935..1226024,1231678..1231797,1232765..1232921,1234171..1234250,1236417..1236518,1238091..1238231,1238725..1238802,1243331..1243423,1244263..1244520)
location: region:1210371-1244520:1
so has part: feature:1210371-1210393:1:exon
so has part: feature:1210923-1211043:1:exon
so has part: feature:1214784-1214828:1:exon
so has part: feature:1216165-1216227:1:exon
so has part: feature:1220150-1220273:1:exon
so has part: feature:1221406-1221620:1:exon
so has part: feature:1224522-1224944:1:exon
so has part: feature:1225935-1226024:1:exon
so has part: feature:1231678-1231797:1:exon
so has part: feature:1232765-1232921:1:exon
so has part: feature:1234171-1234250:1:exon
so has part: feature:1236417-1236518:1:exon
so has part: feature:1238091-1238231:1:exon
so has part: feature:1238725-1238802:1:exon
so has part: feature:1243331-1243423:1:exon
so has part: feature:1244263-1244520:1:exon

XP_026643333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1210371-1210393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210923-1211043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214784-1214828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1216165-1216227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220150-1220273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1221406-1221620:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1224522-1224944:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225935-1226024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231678-1231797:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1232765-1232921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1234171-1234250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1236417-1236518:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238091-1238231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1238725-1238802:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243331-1243423:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1244263-1244520:1:exon

Sgce
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sgce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1268332..1339844)
location: region:1268332-1339844:-1
so has part: feature:1268332-1339844:-1:exon
subclass of: SO_0000010

101997010
type: Gene
SIO_000068: ncbigene

position:1268332:-1
position: 1268332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339844:-1
position: 1339844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268332-1339844:-1:exon

Sgce
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sgce
product: sarcoglycan epsilon, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005363684.2
SIO_010081: Sgce
subclass of: SO_0000673
so part of: Sgce
location: complement(join(1268332..1268610,1270671..1270705,1271564..1271607,1282774..1282962,1284607..1284818,1287165..1287327,1300554..1300752,1305403..1305475,1310966..1311123,1312235..1312357,1339625..1339844))
location: region:1268332-1339844:-1
so has part: feature:1339625-1339844:-1:exon
so has part: feature:1312235-1312357:-1:exon
so has part: feature:1310966-1311123:-1:exon
so has part: feature:1305403-1305475:-1:exon
so has part: feature:1300554-1300752:-1:exon
so has part: feature:1287165-1287327:-1:exon
so has part: feature:1284607-1284818:-1:exon
so has part: feature:1282774-1282962:-1:exon
so has part: feature:1271564-1271607:-1:exon
so has part: feature:1270671-1270705:-1:exon
so has part: feature:1268332-1268610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339625-1339844:-1:exon

position:1339625:-1
position: 1339625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1312235-1312357:-1:exon

position:1312235:-1
position: 1312235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312357:-1
position: 1312357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1310966-1311123:-1:exon

position:1310966:-1
position: 1310966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311123:-1
position: 1311123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1305403-1305475:-1:exon

position:1305403:-1
position: 1305403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305475:-1
position: 1305475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1300554-1300752:-1:exon

position:1300554:-1
position: 1300554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300752:-1
position: 1300752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1287165-1287327:-1:exon

position:1287165:-1
position: 1287165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287327:-1
position: 1287327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1284607-1284818:-1:exon

position:1284607:-1
position: 1284607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284818:-1
position: 1284818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1282774-1282962:-1:exon

position:1282774:-1
position: 1282774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282962:-1
position: 1282962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1271564-1271607:-1:exon

position:1271564:-1
position: 1271564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271607:-1
position: 1271607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1270671-1270705:-1:exon

position:1270671:-1
position: 1270671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270705:-1
position: 1270705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1268332-1268610:-1:exon

position:1268610:-1
position: 1268610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sgce
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sgce
product: sarcoglycan epsilon, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_013352459.2
SIO_010081: Sgce
subclass of: SO_0000673
so part of: Sgce
location: complement(join(1268332..1268610,1270671..1270705,1271564..1271607,1282774..1282962,1283654..1283680,1284607..1284818,1287165..1287327,1300554..1300752,1305403..1305475,1310966..1311123,1312235..1312357,1339625..1339844))
location: region:1268332-1339844:-1
so has part: feature:1339625-1339844:-1:exon
so has part: feature:1312235-1312357:-1:exon
so has part: feature:1310966-1311123:-1:exon
so has part: feature:1305403-1305475:-1:exon
so has part: feature:1300554-1300752:-1:exon
so has part: feature:1287165-1287327:-1:exon
so has part: feature:1284607-1284818:-1:exon
so has part: feature:1283654-1283680:-1:exon
so has part: feature:1282774-1282962:-1:exon
so has part: feature:1271564-1271607:-1:exon
so has part: feature:1270671-1270705:-1:exon
so has part: feature:1268332-1268610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339625-1339844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1312235-1312357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1310966-1311123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305403-1305475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1300554-1300752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287165-1287327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284607-1284818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1283654-1283680:-1:exon

position:1283654:-1
position: 1283654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283680:-1
position: 1283680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1282774-1282962:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1271564-1271607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1270671-1270705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1268332-1268610:-1:exon

Sgce
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sgce
product: sarcoglycan epsilon, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026787549.1
SIO_010081: Sgce
subclass of: SO_0000673
so part of: Sgce
location: complement(join(1268332..1268610,1270671..1270705,1271564..1271607,1282774..1282962,1283654..1283680,1284607..1284818,1287165..1287327,1300554..1300752,1305403..1305475,1310966..1311123,1312235..1312357,1322705..1322812,1339625..1339844))
location: region:1268332-1339844:-1
so has part: feature:1339625-1339844:-1:exon
so has part: feature:1322705-1322812:-1:exon
so has part: feature:1312235-1312357:-1:exon
so has part: feature:1310966-1311123:-1:exon
so has part: feature:1305403-1305475:-1:exon
so has part: feature:1300554-1300752:-1:exon
so has part: feature:1287165-1287327:-1:exon
so has part: feature:1284607-1284818:-1:exon
so has part: feature:1283654-1283680:-1:exon
so has part: feature:1282774-1282962:-1:exon
so has part: feature:1271564-1271607:-1:exon
so has part: feature:1270671-1270705:-1:exon
so has part: feature:1268332-1268610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339625-1339844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1322705-1322812:-1:exon

position:1322705:-1
position: 1322705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322812:-1
position: 1322812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1312235-1312357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1310966-1311123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305403-1305475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1300554-1300752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287165-1287327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284607-1284818:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1283654-1283680:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1282774-1282962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1271564-1271607:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1270671-1270705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1268332-1268610:-1:exon

Sgce
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sgce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsilon-sarcoglycan isoform X2
translation: MSPATTGTFLLTVYTLFSKVHADRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEVSNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARHNLIINIMSAEEFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDMKEGVYVMVGADVAFSSCLREVENPQNQLRCSQEMEPVITCDKKFRTQFHIDWCKISLVDKTKQVSTYHEVVRGEGILPDGGEYKPPSESLKSRDYYTDFLVTLAVPSAVALVLFLILAYIMCCRREGVIQLVHHSSIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGDFRLTTFQRFEVNGIPEERKLTEAMSL
SIO_010081: Sgce
subclass of: SO_0000673
so part of: Sgce
location: complement(join(1268560..1268610,1270671..1270705,1271564..1271607,1282774..1282962,1284607..1284818,1287165..1287327,1300554..1300752,1305403..1305475,1310966..1311123,1312235..1312357,1339625..1339661))
location: region:1268560-1339661:-1
so has part: feature:1339625-1339661:-1:exon
so has part: feature:1312235-1312357:-1:exon
so has part: feature:1310966-1311123:-1:exon
so has part: feature:1305403-1305475:-1:exon
so has part: feature:1300554-1300752:-1:exon
so has part: feature:1287165-1287327:-1:exon
so has part: feature:1284607-1284818:-1:exon
so has part: feature:1282774-1282962:-1:exon
so has part: feature:1271564-1271607:-1:exon
so has part: feature:1270671-1270705:-1:exon
so has part: feature:1268560-1268610:-1:exon

XP_005363741.1
type: Protein
SIO_000068: ncbiprotein

position:1268560:-1
position: 1268560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339661:-1
position: 1339661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339625-1339661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1312235-1312357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1310966-1311123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305403-1305475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1300554-1300752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287165-1287327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284607-1284818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1282774-1282962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271564-1271607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1270671-1270705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1268560-1268610:-1:exon

Sgce
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sgce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsilon-sarcoglycan isoform X1
translation: MSPATTGTFLLTVYTLFSKVHADRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEVSNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARHNLIINIMSAEEFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDMKEGVYVMVGADVAFSSCLREVENPQNQLRCSQEMEPVITCDKKFRTQFHIDWCKISLVDKTKQVSTYHEVVRGEGILPDGGEYKPPSESLKSRDYYTDFLVTLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSSIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGDFRLTTFQRFEVNGIPEERKLTEAMSL
SIO_010081: Sgce
subclass of: SO_0000673
so part of: Sgce
location: complement(join(1268560..1268610,1270671..1270705,1271564..1271607,1282774..1282962,1283654..1283680,1284607..1284818,1287165..1287327,1300554..1300752,1305403..1305475,1310966..1311123,1312235..1312357,1339625..1339661))
location: region:1268560-1339661:-1
so has part: feature:1339625-1339661:-1:exon
so has part: feature:1312235-1312357:-1:exon
so has part: feature:1310966-1311123:-1:exon
so has part: feature:1305403-1305475:-1:exon
so has part: feature:1300554-1300752:-1:exon
so has part: feature:1287165-1287327:-1:exon
so has part: feature:1284607-1284818:-1:exon
so has part: feature:1283654-1283680:-1:exon
so has part: feature:1282774-1282962:-1:exon
so has part: feature:1271564-1271607:-1:exon
so has part: feature:1270671-1270705:-1:exon
so has part: feature:1268560-1268610:-1:exon

XP_013207913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1339625-1339661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1312235-1312357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1310966-1311123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305403-1305475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1300554-1300752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287165-1287327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284607-1284818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1283654-1283680:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282774-1282962:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1271564-1271607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1270671-1270705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1268560-1268610:-1:exon

Sgce
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sgce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsilon-sarcoglycan isoform X3
translation: MSPATTGTFLLTAFLLSCADGINGTGNWKTRQANSFIISRKMAAGKKDVYTLFSKVHADRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEVSNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARHNLIINIMSAEEFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDMKEGVYVMVGADVAFSSCLREVENPQNQLRCSQEMEPVITCDKKFRTQFHIDWCKISLVDKTKQVSTYHEVVRGEGILPDGGEYKPPSESLKSRDYYTDFLVTLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSSIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGDFRLTTFQRFEVNGIPEERKLTEAMSL
SIO_010081: Sgce
subclass of: SO_0000673
so part of: Sgce
location: complement(join(1268560..1268610,1270671..1270705,1271564..1271607,1282774..1282962,1283654..1283680,1284607..1284818,1287165..1287327,1300554..1300752,1305403..1305475,1310966..1311123,1312235..1312357,1322705..1322812,1339625..1339661))
location: region:1268560-1339661:-1
so has part: feature:1339625-1339661:-1:exon
so has part: feature:1322705-1322812:-1:exon
so has part: feature:1312235-1312357:-1:exon
so has part: feature:1310966-1311123:-1:exon
so has part: feature:1305403-1305475:-1:exon
so has part: feature:1300554-1300752:-1:exon
so has part: feature:1287165-1287327:-1:exon
so has part: feature:1284607-1284818:-1:exon
so has part: feature:1283654-1283680:-1:exon
so has part: feature:1282774-1282962:-1:exon
so has part: feature:1271564-1271607:-1:exon
so has part: feature:1270671-1270705:-1:exon
so has part: feature:1268560-1268610:-1:exon

XP_026643350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1339625-1339661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1322705-1322812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1312235-1312357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1310966-1311123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305403-1305475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1300554-1300752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287165-1287327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284607-1284818:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1283654-1283680:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1282774-1282962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1271564-1271607:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1270671-1270705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1268560-1268610:-1:exon

Peg10
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Peg10
note: paternally expressed 10; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1340009..1352481
location: region:1340009-1352481:1
so has part: feature:1340009-1352481:1:exon
subclass of: SO_0000010

101997667
type: Gene
SIO_000068: ncbigene

position:1340009:1
position: 1340009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352481:1
position: 1352481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340009-1352481:1:exon

Peg10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Peg10
product: paternally expressed 10, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001291243.1
SIO_010081: Peg10
subclass of: SO_0000673
so part of: Peg10
location: join(1340009..1340242,1347462..1352481)
location: region:1340009-1352481:1
so has part: feature:1340009-1340242:1:exon
so has part: feature:1347462-1352481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1340009-1340242:1:exon

position:1340242:1
position: 1340242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1347462-1352481:1:exon

position:1347462:1
position: 1347462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Peg10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Peg10
product: paternally expressed 10, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001291244.1
SIO_010081: Peg10
subclass of: SO_0000673
so part of: Peg10
location: join(1340009..1340242,1347462..1352481)
location: region:1340009-1352481:1
so has part: feature:1340009-1340242:1:exon
so has part: feature:1347462-1352481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1340009-1340242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347462-1352481:1:exon

Peg10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Peg10
ribosomal slippage: true
note: protein translation is dependent on -1 ribosomal frameshift; isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: retrotransposon-derived protein PEG10 isoform 1
translation: MRNKRVLRTRRRRRPRGAQDPGHPPQSEPTPGRSPPTTTMATGGFDCPPPPPPPPPNNNNNNNKPKSPCVPNNNQRRRRRHGEISGESSGFREQQVVRPTMRNNSLHTQVELFPGHNGSFGNFGSFGNFGNFGNLRSPRSPRSPRSLRSLRNLRSFRHLRDHVEVEVEPEPQHIHFRFRLEDNDDDLALQGAAAAAAPTIFFDDDCLEFLPEKFDGNPDNLNYFIAQCQTFMERSNRDFSADRIRVCFVTSMLTGRAARWASIKLERASYLMNNYRAFMMELKQVFEDPQRREAAKRKIRRLRQGLGSVAEYANSFQMVAQDLDWNEHALIDQFLEGLSDEIREEVSRHELPDTLSALISLSIHIERRQARAAAAAAAAARKPRPDPPRALVMPQNRQSDPTEPVGGARMRLTQEEKERRRKLNLCLYCGSGGHYADNCPAKASKNSPSGKLPGPAVEGPSATGPDRIRSPPPEASTPHLQVMLQIHIPGRHTLFVRAMIDSGASGNFIDQDFVIQNGIPLRIKEWPIMVEAIDGHPIASGPIVLETHHLIVDLGDHRELLSFDVTQSPFFPIVLGIRWLSTHDPHITWSTRSIVFNSDYCRFRCRVYSQIPPALLLPPYPPHPPFFYHVDGYRVFHPVRYYYVQNVYTPVDEHVYPGHRLVDPHIEMIPGAHSIPSGHVYSLSESEMAALREFVDRNVKNGLMIPTVAPNGAQVLQVKRGWKLQVTYNCRAPHNCTVQNQYVRMTLPNMADHAHLATYGEFVPHIHGYHHHHHHIPVYAYAGHQVMFAWHPVGRDIHGRMILTPVVITWCPHWYRHHPHPVPQYPPPPPPPPPPPPPPPPPPPPPSYSTL
SIO_010081: Peg10
subclass of: SO_0000673
so part of: Peg10
location: join(1340238..1340242,1347462..1348806,1348806..1350011)
location: region:1340238-1350011:1
so has part: feature:1340238-1340242:1:exon
so has part: feature:1347462-1348806:1:exon
so has part: feature:1348806-1350011:1:exon

NP_001278172.1
type: Protein
SIO_000068: ncbiprotein

position:1340238:1
position: 1340238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350011:1
position: 1350011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340238-1340242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347462-1348806:1:exon

position:1348806:1
position: 1348806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1348806-1350011:1:exon

Peg10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Peg10
note: isoform 2 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: retrotransposon-derived protein PEG10 isoform 2
translation: MRNKRVLRTRRRRRPRGAQDPGHPPQSEPTPGRSPPTTTMATGGFDCPPPPPPPPPNNNNNNNKPKSPCVPNNNQRRRRRHGEISGESSGFREQQVVRPTMRNNSLHTQVELFPGHNGSFGNFGSFGNFGNFGNLRSPRSPRSPRSLRSLRNLRSFRHLRDHVEVEVEPEPQHIHFRFRLEDNDDDLALQGAAAAAAPTIFFDDDCLEFLPEKFDGNPDNLNYFIAQCQTFMERSNRDFSADRIRVCFVTSMLTGRAARWASIKLERASYLMNNYRAFMMELKQVFEDPQRREAAKRKIRRLRQGLGSVAEYANSFQMVAQDLDWNEHALIDQFLEGLSDEIREEVSRHELPDTLSALISLSIHIERRQARAAAAAAAAARKPRPDPPRALVMPQNRQSDPTEPVGGARMRLTQEEKERRRKLNLCLYCGSGGHYADNCPAKASKNSPSGNSPAPL
SIO_010081: Peg10
subclass of: SO_0000673
so part of: Peg10
location: join(1340238..1340242,1347462..1348827)
location: region:1340238-1348827:1
so has part: feature:1340238-1340242:1:exon
so has part: feature:1347462-1348827:1:exon

NP_001278173.1
type: Protein
SIO_000068: ncbiprotein

position:1348827:1
position: 1348827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340238-1340242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347462-1348827:1:exon

LOC106144246
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1356828..1364847)
location: region:1356828-1364847:-1
so has part: feature:1356828-1364847:-1:exon
subclass of: SO_0000010

106144246
type: Gene
SIO_000068: ncbigene

position:1356828:-1
position: 1356828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364847:-1
position: 1364847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1356828-1364847:-1:exon

LOC106144246
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC106144246
product: uncharacterized LOC106144246
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_026787513.1
SIO_010081: LOC106144246
subclass of: SO_0000673
so part of: LOC106144246
location: complement(join(1356828..1357040,1358435..1358614,1358795..1360597,1360649..1360966,1364810..1364847))
location: region:1356828-1364847:-1
so has part: feature:1364810-1364847:-1:exon
so has part: feature:1360649-1360966:-1:exon
so has part: feature:1358795-1360597:-1:exon
so has part: feature:1358435-1358614:-1:exon
so has part: feature:1356828-1357040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1364810-1364847:-1:exon

position:1364810:-1
position: 1364810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1360649-1360966:-1:exon

position:1360649:-1
position: 1360649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360966:-1
position: 1360966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1358795-1360597:-1:exon

position:1358795:-1
position: 1358795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360597:-1
position: 1360597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358435-1358614:-1:exon

position:1358435:-1
position: 1358435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358614:-1
position: 1358614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1356828-1357040:-1:exon

position:1357040:-1
position: 1357040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106144246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC106144246
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 4 bases in 3 codons; substituted 5 bases at 5 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1360945..1360947),aa:OTHER)
transl except: (pos:complement(1360666..1360668),aa:OTHER)
transl except: (pos:complement(1360302..1360304),aa:OTHER)
transl except: (pos:complement(1360004..1360006),aa:OTHER)
transl except: (pos:complement(1359963..1359965),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC106144246
translation: MPMQIYSKKEQADSLKAGLXGAARYPSNLAKVREVLRGLVEPPSVFLEHLKMAYRHYTPFDPTTSEGQQAAVAMAFIGQSASEIKXKLQRLEGLQDYTLQDLVKEAEKVFHKXETEEEKERERERDRGGGRREDRRDHRREXNLTRMLAAVVGEKGKTGPRQIGNLGNRRPKMSEDGQRYPLDKDQCAYCKEKGHWARECPKKKGGASKVLALKEDDXRGWGSDPLPHPRAGTPMDFLVDTGAEHSLLKQPLEKLKNTKTIVIGTTGQKQYLWTTLRTVDLGKGQVTHSFLVIPECPTHLLERDLLTTLKAQIKFTXTRPEVQSLLLSKXMTFAPCAVLNPTTLLPETEDSSHTHYYADILAEEASIRNDLKDXPLAGESKWYTDGSSFTIEGKRKVGAALVDGMQVFLHSLSEGXSAQEAKLVALIQAVPMAEGKSINIYTDSRYVFATAHIHGTIYRQRGLLTSAGKDIKIKKKNLSLLEAIHLPRKVAIIHCPGHQKARDVVAKGNQMADLTAKQAAQGAMILAVKEPKDYYGISETNFRYAPKDYQVMGKLGLVKKTPYGAVGTEGGKLVIPQKQGHKYVTNLHYPTHLGAKKLKDVVRSSNYYIMGLSDLAEEVIKSCKACAMTNAGHSIYTPGKRFRGDWPGAYWEEDFTEIKPAGYGNKYLLVFIDTFSVWVEAFPTRTKTANVVAKIIEELFLRFWILRAIGSDNGPAFVAQVRIIPGRFKLTPYEILCGELPPLTESRGVYNPDAILSRPLFARLKAPEVVGHQICEQMKEFLHALLYMMATFLTKGKDGRPDDLSAIFAMGNHMTATILNNVRSDDLTMATAASQLSRLTGTPANCLLCL
SIO_010081: LOC106144246
subclass of: SO_0000673
so part of: LOC106144246
location: complement(join(1356828..1357040,1358435..1358614,1358795..1360597,1360649..1360966,1364810..1364847))
location: region:1356828-1364847:-1
so has part: feature:1364810-1364847:-1:exon
so has part: feature:1360649-1360966:-1:exon
so has part: feature:1358795-1360597:-1:exon
so has part: feature:1358435-1358614:-1:exon
so has part: feature:1356828-1357040:-1:exon

XP_026643314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1364810-1364847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1360649-1360966:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358795-1360597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358435-1358614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1356828-1357040:-1:exon

LOC101997971
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101997971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1404021..1405102
location: region:1404021-1405102:1
so has part: feature:1404021-1405102:1:exon
subclass of: SO_0000010

101997971
type: Gene
SIO_000068: ncbigene

position:1404021:1
position: 1404021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405102:1
position: 1405102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404021-1405102:1:exon

LOC101997971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101997971
product: glyceraldehyde-3-phosphate dehydrogenase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026787538.1
SIO_010081: LOC101997971
subclass of: SO_0000673
so part of: LOC101997971
location: 1404021..1405102
location: region:1404021-1405102:1
so has part: feature:1404021-1405102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1404021-1405102:1:exon

LOC101997971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101997971
product: glyceraldehyde-3-phosphate dehydrogenase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026787539.1
SIO_010081: LOC101997971
subclass of: SO_0000673
so part of: LOC101997971
location: join(1404021..1404158,1404213..1405102)
location: region:1404021-1405102:1
so has part: feature:1404021-1404158:1:exon
so has part: feature:1404213-1405102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1404021-1404158:1:exon

position:1404158:1
position: 1404158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1404213-1405102:1:exon

position:1404213:1
position: 1404213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101997971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101997971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyceraldehyde-3-phosphate dehydrogenase-like isoform X1
translation: MVKVGVNRFGRIGRLVTRAAFTSGKVDVVAINDPFIHLNYMVYMFQYDSTHGKFKGTVKAENGKLVIKGKTITIFQERDPANIKWGDAGAEYVVESTSVFTTMEKAGAHLKGGAKRVIISAPSVDAPMFVMGVNHDKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQSIIPASTGAAKAVGKAIPELNWNLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEDPLKGILGYTEDQVVSCDFNSDAHSSTFDAGAGIALNDNFVKLISWYNNEFSYSDRVVDLMAYMASKE
SIO_010081: LOC101997971
subclass of: SO_0000673
so part of: LOC101997971
location: 1404036..1405037
location: region:1404036-1405037:1
so has part: feature:1404036-1405037:1:exon

XP_026643339.1
type: Protein
SIO_000068: ncbiprotein

position:1404036:1
position: 1404036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405037:1
position: 1405037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404036-1405037:1:exon

LOC101997971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101997971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyceraldehyde-3-phosphate dehydrogenase-like isoform X2
translation: MVKVGVNRFGRIGRLVTRAAFTSGKVDVVAINDPFIHLNYMAENGKLVIKGKTITIFQERDPANIKWGDAGAEYVVESTSVFTTMEKAGAHLKGGAKRVIISAPSVDAPMFVMGVNHDKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQSIIPASTGAAKAVGKAIPELNWNLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEDPLKGILGYTEDQVVSCDFNSDAHSSTFDAGAGIALNDNFVKLISWYNNEFSYSDRVVDLMAYMASKE
SIO_010081: LOC101997971
subclass of: SO_0000673
so part of: LOC101997971
location: join(1404036..1404158,1404213..1405037)
location: region:1404036-1405037:1
so has part: feature:1404036-1404158:1:exon
so has part: feature:1404213-1405037:1:exon

XP_026643340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1404036-1404158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404213-1405037:1:exon

Ppp1r9a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1525611..1805820
location: region:1525611-1805820:1
so has part: feature:1525611-1805820:1:exon
subclass of: SO_0000010

101998259
type: Gene
SIO_000068: ncbigene

position:1525611:1
position: 1525611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805820:1
position: 1805820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525611-1805820:1:exon

Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_026787519.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525611..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1805820)
location: region:1525611-1805820:1
so has part: feature:1525611-1525700:1:exon
so has part: feature:1527871-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1805820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525611-1525700:1:exon

position:1525700:1
position: 1525700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1527871-1529473:1:exon

position:1527871:1
position: 1527871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529473:1
position: 1529473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1683036-1683168:1:exon

position:1683036:1
position: 1683036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683168:1
position: 1683168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1695214-1695334:1:exon

position:1695214:1
position: 1695214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695334:1
position: 1695334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1704688-1704792:1:exon

position:1704688:1
position: 1704688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704792:1
position: 1704792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1715416-1715551:1:exon

position:1715416:1
position: 1715416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1715551:1
position: 1715551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1720672-1720737:1:exon

position:1720672:1
position: 1720672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1720737:1
position: 1720737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1738961-1739116:1:exon

position:1738961:1
position: 1738961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739116:1
position: 1739116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1751802-1751855:1:exon

position:1751802:1
position: 1751802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751855:1
position: 1751855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1755219-1755448:1:exon

position:1755219:1
position: 1755219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1755448:1
position: 1755448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1756691-1756787:1:exon

position:1756691:1
position: 1756691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756787:1
position: 1756787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1756907-1757078:1:exon

position:1756907:1
position: 1756907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757078:1
position: 1757078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1773834-1773991:1:exon

position:1773834:1
position: 1773834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1773991:1
position: 1773991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1774504-1774747:1:exon

position:1774504:1
position: 1774504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1774747:1
position: 1774747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1783824-1783911:1:exon

position:1783824:1
position: 1783824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783911:1
position: 1783911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1784002-1784079:1:exon

position:1784002:1
position: 1784002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784079:1
position: 1784079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1794367-1794565:1:exon

position:1794367:1
position: 1794367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794565:1
position: 1794565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1796505-1796624:1:exon

position:1796505:1
position: 1796505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796624:1
position: 1796624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1797409-1797432:1:exon

position:1797409:1
position: 1797409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797432:1
position: 1797432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1798440-1798622:1:exon

position:1798440:1
position: 1798440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798622:1
position: 1798622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1799878-1805820:1:exon

position:1799878:1
position: 1799878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026787520.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525611..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1798440..1798622,1799878..1805820)
location: region:1525611-1805820:1
so has part: feature:1525611-1525700:1:exon
so has part: feature:1527871-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1805820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525611-1525700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527871-1529473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1799878-1805820:1:exon

Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026787523.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525611..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1805820)
location: region:1525611-1805820:1
so has part: feature:1525611-1525700:1:exon
so has part: feature:1527871-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1805820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525611-1525700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527871-1529473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1799878-1805820:1:exon

Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026787521.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
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Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_026787522.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525611..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1805820)
location: region:1525611-1805820:1
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Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026787524.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525611..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1798440..1798622,1799878..1805820)
location: region:1525611-1805820:1
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urn:…
SIO_000300: 18
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1799878-1805820:1:exon

Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_026787525.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525612..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1805820)
location: region:1525612-1805820:1
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position:1525612:1
position: 1525612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
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Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005363689.3
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525612..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1805820)
location: region:1525612-1805820:1
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urn:…
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Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_026787526.1
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1525612..1525700,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1796505..1796624,1798440..1798622,1799878..1805820)
location: region:1525612-1805820:1
so has part: feature:1525612-1525700:1:exon
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urn:…
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Ppp1r9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppp1r9a
product: protein phosphatase 1 regulatory subunit 9A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_013352444.2
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1526262..1526561,1527871..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1805820)
location: region:1526262-1805820:1
so has part: feature:1526262-1526561:1:exon
so has part: feature:1527871-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1805820:1:exon

position:1526262:1
position: 1526262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526262-1526561:1:exon

position:1526561:1
position: 1526561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1527871-1529473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1799878-1805820:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X1
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDESTVAELQGMSGNCNNNNNRFLKTGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKDWRVSSPESDSGVALLTPVASHGAFSSHHVTESQEGLQLPERDTLSSVSGDTSPSSPSKSDHETEDASCHRQATKKTLHEKDGANCPKSLRTSSSFMVQGGKLKQKFVDLGAPLRWNPNKGKKWKEKEASRFSAGGRVFRSKLENWKAKPPPAAQATPRSPCMPFSWFTESRKGSYSFRNLPSVPSPLLPSPETLISDKTGSKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643320.1
type: Protein
SIO_000068: ncbiprotein

position:1528085:1
position: 1528085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800087:1
position: 1800087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X1
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDESTVAELQGMSGNCNNNNNRFLKTGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKDWRVSSPESDSGVALLTPVASHGAFSSHHVTESQEGLQLPERDTLSSVSGDTSPSSPSKSDHETEDASCHRQATKKTLHEKDGANCPKSLRTSSSFMVQGGKLKQKFVDLGAPLRWNPNKGKKWKEKEASRFSAGGRVFRSKLENWKAKPPPAAQATPRSPCMPFSWFTESRKGSYSFRNLPSVPSPLLPSPETLISDKTGSKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_013207898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X2
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDESTVAELQGMSGNCNNNNNRFLKTGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKDWRVSSPESDSGVALLTPVASHGAFSSHHVTESQEGLQLPERDTLSSVSGDTSPSSPSKSDHETEDASCHRQATKKTLHEKDGANCPKSLRTSSSFMVQGGKLKQKFVDLGAPLRWNPNKGKKWKEKEASRFSAGGRVFRSKLENWKAKPPPAAQATPRSPCMPFSWFTESRKGSYSFRNLPSVPSPLLPSPETLISDKTGSKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X5
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDESTVAELQGMSGNCNNNNNRFLKTGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKDWRVSSPESDSGVALLTPVASHGAFSSHHVTESQEGLQLPERDTLSSVSGDTSPSSPSKSDHETEDASCHRQATKKTLHEKDGANCPKSLRTSSSFMVQGGKLKQKFVDLGVFRSKLENWKAKPPPAAQATPRSPCMPFSWFTESRKGSYSFRNLPSVPSPLLPSPETLISDKTGSKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X7
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDESTVAELQGMSGNCNNNNNRFLKTGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X3
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDESTVAELQGMSGNCNNNNNRFLKTGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKDWRVSSPESDSGVALLTPVASHGAFSSHHVTESQEGLQLPERDTLSSVSGDTSPSSPSKSDHETEDASCHRQATKKTLHEKDGANCPKSLRTSSSFMVQGGKLKQKFVDLGAPLRWNPNKGKKWKEKEASRFSAGGRVFRSKLENWKAKPPPAAQATPRSPCMPFSWFTESRKGSYSFRNLPSVPSPLLPSPETLISDKTGSKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1720672..1720737,1738961..1739116,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1720672-1720737:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1720672-1720737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X4
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDETGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKDWRVSSPESDSGVALLTPVASHGAFSSHHVTESQEGLQLPERDTLSSVSGDTSPSSPSKSDHETEDASCHRQATKKTLHEKDGANCPKSLRTSSSFMVQGGKLKQKFVDLGAPLRWNPNKGKKWKEKEASRFSAGGRVFRSKLENWKAKPPPAAQATPRSPCMPFSWFTESRKGSYSFRNLPSVPSPLLPSPETLISDKTGSKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X6
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDETGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKDWRVSSPESDSGVALLTPVASHGAFSSHHVTESQEGLQLPERDTLSSVSGDTSPSSPSKSDHETEDASCHRQATKKTLHEKDGANCPKSLRTSSSFMVQGGKLKQKFVDLGAPLRWNPNKGKKWKEKEASRFSAGGRVFRSKLENWKAKPPPAAQATPRSPCMPFSWFTESRKGSYSFRNLPSVPSPLLPSPETLISDKTGSKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1774504..1774747,1783824..1783911,1784002..1784079,1794367..1794565,1796505..1796624,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1774504-1774747:1:exon
so has part: feature:1783824-1783911:1:exon
so has part: feature:1784002-1784079:1:exon
so has part: feature:1794367-1794565:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1774504-1774747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1783824-1783911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1784002-1784079:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1794367-1794565:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X8
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDETGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1796505..1796624,1797409..1797432,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1797409-1797432:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_005363746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1797409-1797432:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1799878-1800087:1:exon

Ppp1r9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppp1r9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-1 isoform X9
translation: MLKAESSGERSTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTRDGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVVAKTRGKGRPTSPQRRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSVHESGHNNRYSPKKEKAGGTEALDEWGVSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFESTESPSAVASEKTESHEYSVTGHYPLTLPSVTITNLDTFGHLKDSNSRSSSSKQGVETEDPQKTPATAEVAREAASLASLPSEETELSKGAEDVTSPQETLDSTDTDIPEEPSAENQAMPKSDHLPAPNEASEDAEADVVGGETAQPQKKDLAGGDVTSPDASASSCGREVLEDSNNYESSHVYMQSDYNVYRVRSRYNSDWGETGTEQDEEDDSDENSDYQPDMEYSEIVGLPEEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTDGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDETGEYATDEEEEEVGPTLPGGDMAIEVFELPENEDMFSPSDLDTNKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKSQLQQNIEENKERMLKLETYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQSGTQVNNNNNIFERRTSPGEGSKADTMENVEVRQMSCQDGLGQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDEILDDGQSPKHSLSLNRAIHEWSVQQVSHWLMSLNLDQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAHEKMEKQREKLRRREHEQMQRKSKKSEKMTSTSERNTEQ
SIO_010081: Ppp1r9a
subclass of: SO_0000673
so part of: Ppp1r9a
location: join(1528085..1529473,1683036..1683168,1695214..1695334,1704688..1704792,1715416..1715551,1738961..1739116,1751802..1751855,1755219..1755448,1756691..1756787,1756907..1757078,1773834..1773991,1796505..1796624,1798440..1798622,1799878..1800087)
location: region:1528085-1800087:1
so has part: feature:1528085-1529473:1:exon
so has part: feature:1683036-1683168:1:exon
so has part: feature:1695214-1695334:1:exon
so has part: feature:1704688-1704792:1:exon
so has part: feature:1715416-1715551:1:exon
so has part: feature:1738961-1739116:1:exon
so has part: feature:1751802-1751855:1:exon
so has part: feature:1755219-1755448:1:exon
so has part: feature:1756691-1756787:1:exon
so has part: feature:1756907-1757078:1:exon
so has part: feature:1773834-1773991:1:exon
so has part: feature:1796505-1796624:1:exon
so has part: feature:1798440-1798622:1:exon
so has part: feature:1799878-1800087:1:exon

XP_026643327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528085-1529473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683036-1683168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695214-1695334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704688-1704792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715416-1715551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738961-1739116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751802-1751855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755219-1755448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1756691-1756787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756907-1757078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1773834-1773991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1796505-1796624:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1798440-1798622:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1799878-1800087:1:exon

Pon1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pon1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1808974..1838136)
location: region:1808974-1838136:-1
so has part: feature:1808974-1838136:-1:exon
subclass of: SO_0000010

101998718
type: Gene
SIO_000068: ncbigene

position:1808974:-1
position: 1808974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1838136:-1
position: 1838136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808974-1838136:-1:exon

Pon1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pon1
product: paraoxonase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005363690.2
SIO_010081: Pon1
subclass of: SO_0000673
so part of: Pon1
location: complement(join(1808974..1809261,1812401..1812529,1816159..1816240,1817728..1817928,1821089..1821215,1825566..1825734,1826049..1826104,1827915..1827985,1837859..1838136))
location: region:1808974-1838136:-1
so has part: feature:1837859-1838136:-1:exon
so has part: feature:1827915-1827985:-1:exon
so has part: feature:1826049-1826104:-1:exon
so has part: feature:1825566-1825734:-1:exon
so has part: feature:1821089-1821215:-1:exon
so has part: feature:1817728-1817928:-1:exon
so has part: feature:1816159-1816240:-1:exon
so has part: feature:1812401-1812529:-1:exon
so has part: feature:1808974-1809261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1837859-1838136:-1:exon

position:1837859:-1
position: 1837859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1827915-1827985:-1:exon

position:1827915:-1
position: 1827915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827985:-1
position: 1827985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1826049-1826104:-1:exon

position:1826049:-1
position: 1826049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826104:-1
position: 1826104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1825566-1825734:-1:exon

position:1825566:-1
position: 1825566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825734:-1
position: 1825734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1821089-1821215:-1:exon

position:1821089:-1
position: 1821089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821215:-1
position: 1821215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1817728-1817928:-1:exon

position:1817728:-1
position: 1817728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817928:-1
position: 1817928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1816159-1816240:-1:exon

position:1816159:-1
position: 1816159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816240:-1
position: 1816240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1812401-1812529:-1:exon

position:1812401:-1
position: 1812401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1812529:-1
position: 1812529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1808974-1809261:-1:exon

position:1809261:-1
position: 1809261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pon1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pon1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum paraoxonase/arylesterase 1
translation: MAKLIGLTLVGLLLAFYKNHQSSYQTRLAAFREVTPVELPNCNLIKGIETGAEDLEILPNGLAFFSTGLKYPGIKSFDPNAPGKILLMDLNEKNPAVLELEMTGNKFDKSSFNPHGVSTFTDEDNAVYLLVVNHPDFKSTVEVFKFQEEERSLLHLRTITHELLPSINDIAAVGPESFYATNDHYFADPYLKSWEMYLGLSWSNVVYYSPDKVQVLAEGFDFANGIGISPDGKHVYITELLAHKIHVYEKHANWTLTPLKTLNFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQNILSEEPKVTVVYAENGTVLQGSTVASVYKGKLLVGTVYHRALYCDL
SIO_010081: Pon1
subclass of: SO_0000673
so part of: Pon1
location: complement(join(1809103..1809261,1812401..1812529,1816159..1816240,1817728..1817928,1821089..1821215,1825566..1825734,1826049..1826104,1827915..1827985,1837859..1837932))
location: region:1809103-1837932:-1
so has part: feature:1837859-1837932:-1:exon
so has part: feature:1827915-1827985:-1:exon
so has part: feature:1826049-1826104:-1:exon
so has part: feature:1825566-1825734:-1:exon
so has part: feature:1821089-1821215:-1:exon
so has part: feature:1817728-1817928:-1:exon
so has part: feature:1816159-1816240:-1:exon
so has part: feature:1812401-1812529:-1:exon
so has part: feature:1809103-1809261:-1:exon

XP_005363747.1
type: Protein
SIO_000068: ncbiprotein

position:1809103:-1
position: 1809103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837932:-1
position: 1837932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1837859-1837932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1827915-1827985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826049-1826104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825566-1825734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1821089-1821215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1817728-1817928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1816159-1816240:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1812401-1812529:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1809103-1809261:-1:exon

Pon3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pon3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1862415..1895054)
location: region:1862415-1895054:-1
so has part: feature:1862415-1895054:-1:exon
subclass of: SO_0000010

101998998
type: Gene
SIO_000068: ncbigene

position:1862415:-1
position: 1862415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895054:-1
position: 1895054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1862415-1895054:-1:exon

Pon3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pon3
product: paraoxonase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005363691.2
SIO_010081: Pon3
subclass of: SO_0000673
so part of: Pon3
location: complement(join(1862415..1863368,1867866..1867994,1868219..1868300,1869845..1870045,1872410..1872536,1879271..1879436,1885032..1885087,1893386..1893456,1894927..1895054))
location: region:1862415-1895054:-1
so has part: feature:1894927-1895054:-1:exon
so has part: feature:1893386-1893456:-1:exon
so has part: feature:1885032-1885087:-1:exon
so has part: feature:1879271-1879436:-1:exon
so has part: feature:1872410-1872536:-1:exon
so has part: feature:1869845-1870045:-1:exon
so has part: feature:1868219-1868300:-1:exon
so has part: feature:1867866-1867994:-1:exon
so has part: feature:1862415-1863368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1894927-1895054:-1:exon

position:1894927:-1
position: 1894927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1893386-1893456:-1:exon

position:1893386:-1
position: 1893386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893456:-1
position: 1893456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1885032-1885087:-1:exon

position:1885032:-1
position: 1885032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885087:-1
position: 1885087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1879271-1879436:-1:exon

position:1879271:-1
position: 1879271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1879436:-1
position: 1879436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1872410-1872536:-1:exon

position:1872410:-1
position: 1872410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872536:-1
position: 1872536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1869845-1870045:-1:exon

position:1869845:-1
position: 1869845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870045:-1
position: 1870045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1868219-1868300:-1:exon

position:1868219:-1
position: 1868219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868300:-1
position: 1868300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1867866-1867994:-1:exon

position:1867866:-1
position: 1867866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867994:-1
position: 1867994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1862415-1863368:-1:exon

position:1863368:-1
position: 1863368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pon3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pon3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum paraoxonase/lactonase 3
translation: MGKLVVLTLLGASLALIGERLLTFRERFSSTREIKSTEPQHCHLIEGLENGSEDIDILPSGLAFISTGLKYPGMPNFAPDKPGRIFLMDLNEQNPKAQALKISDGFDKESLNPHGISTFVDKDNTVYLYVVNHPHMDSTVEIFKFEEQQRSLIHLKTITHELLKSVNDIVVVGPEQFYATRDHYFTSYFLVLLEMFMDFQWTYVLFYSPREVKVVAQGFSSANGITISLDQKYVYVADVMAKNIHVLKKHDNWNLTQEKVIQLETLVDNLTVDPATGDILAGCHPNPSKILVYNPEDPPGSEVLRIQDTLSDKPRVSTLYINNGSVLQGSSVASVYHGKMLIGTVFHKALYCEL
SIO_010081: Pon3
subclass of: SO_0000673
so part of: Pon3
location: complement(join(1863210..1863368,1867866..1867994,1868219..1868300,1869845..1870045,1872410..1872536,1879271..1879436,1885032..1885087,1893386..1893456,1894927..1895000))
location: region:1863210-1895000:-1
so has part: feature:1894927-1895000:-1:exon
so has part: feature:1893386-1893456:-1:exon
so has part: feature:1885032-1885087:-1:exon
so has part: feature:1879271-1879436:-1:exon
so has part: feature:1872410-1872536:-1:exon
so has part: feature:1869845-1870045:-1:exon
so has part: feature:1868219-1868300:-1:exon
so has part: feature:1867866-1867994:-1:exon
so has part: feature:1863210-1863368:-1:exon

XP_005363748.1
type: Protein
SIO_000068: ncbiprotein

position:1863210:-1
position: 1863210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895000:-1
position: 1895000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1894927-1895000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893386-1893456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1885032-1885087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1879271-1879436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1872410-1872536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869845-1870045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1868219-1868300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1867866-1867994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1863210-1863368:-1:exon

Pon2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1900523..1933417)
location: region:1900523-1933417:-1
so has part: feature:1900523-1933417:-1:exon
subclass of: SO_0000010

101999281
type: Gene
SIO_000068: ncbigene

position:1900523:-1
position: 1900523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933417:-1
position: 1933417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900523-1933417:-1:exon

Pon2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pon2
product: paraoxonase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005363692.2
SIO_010081: Pon2
subclass of: SO_0000673
so part of: Pon2
location: complement(join(1900523..1901301,1901921..1902049,1902772..1902853,1903458..1903658,1906617..1906743,1907602..1907767,1910966..1911021,1920384..1920454,1933289..1933417))
location: region:1900523-1933417:-1
so has part: feature:1933289-1933417:-1:exon
so has part: feature:1920384-1920454:-1:exon
so has part: feature:1910966-1911021:-1:exon
so has part: feature:1907602-1907767:-1:exon
so has part: feature:1906617-1906743:-1:exon
so has part: feature:1903458-1903658:-1:exon
so has part: feature:1902772-1902853:-1:exon
so has part: feature:1901921-1902049:-1:exon
so has part: feature:1900523-1901301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1933289-1933417:-1:exon

position:1933289:-1
position: 1933289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1920384-1920454:-1:exon

position:1920384:-1
position: 1920384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1920454:-1
position: 1920454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1910966-1911021:-1:exon

position:1910966:-1
position: 1910966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911021:-1
position: 1911021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1907602-1907767:-1:exon

position:1907602:-1
position: 1907602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907767:-1
position: 1907767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1906617-1906743:-1:exon

position:1906617:-1
position: 1906617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906743:-1
position: 1906743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1903458-1903658:-1:exon

position:1903458:-1
position: 1903458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1903658:-1
position: 1903658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1902772-1902853:-1:exon

position:1902772:-1
position: 1902772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902853:-1
position: 1902853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1901921-1902049:-1:exon

position:1901921:-1
position: 1901921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902049:-1
position: 1902049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1900523-1901301:-1:exon

position:1901301:-1
position: 1901301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pon2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum paraoxonase/arylesterase 2
translation: MGRLVALSLLGIGLALLGERFLALRNRLKASREVESVDLPNCHLIKGIEAGAEDIDVLPNGLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRALELKISWGFDLASFNPHGISTFIDDDDTVYLFVVNHPEFRNTVEIFKFEEEENSLLHLKTIKHELLPSVNDIIAVGPAHFYATNDHYFSDPFLKYLETYLNLHWANVVYYSPDEVKLVAEGFDSANGINISPDKKYVYVADILAHEIHVLEKQPNMNLTQIKVLHLGTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPSHPPSSEVLRIQNILSEKPSVSTVYINNGSVLQGSSVATIYDRKLLVGTLYQRALYCEL
SIO_010081: Pon2
subclass of: SO_0000673
so part of: Pon2
location: complement(join(1901143..1901301,1901921..1902049,1902772..1902853,1903458..1903658,1906617..1906743,1907602..1907767,1910966..1911021,1920384..1920454,1933289..1933362))
location: region:1901143-1933362:-1
so has part: feature:1933289-1933362:-1:exon
so has part: feature:1920384-1920454:-1:exon
so has part: feature:1910966-1911021:-1:exon
so has part: feature:1907602-1907767:-1:exon
so has part: feature:1906617-1906743:-1:exon
so has part: feature:1903458-1903658:-1:exon
so has part: feature:1902772-1902853:-1:exon
so has part: feature:1901921-1902049:-1:exon
so has part: feature:1901143-1901301:-1:exon

XP_005363749.1
type: Protein
SIO_000068: ncbiprotein

position:1901143:-1
position: 1901143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933362:-1
position: 1933362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1933289-1933362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920384-1920454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1910966-1911021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1907602-1907767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906617-1906743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1903458-1903658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1902772-1902853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1901921-1902049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1901143-1901301:-1:exon

Asb4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Asb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2005694..2049993
location: region:2005694-2049993:1
so has part: feature:2005694-2049993:1:exon
subclass of: SO_0000010

101999544
type: Gene
SIO_000068: ncbigene

position:2005694:1
position: 2005694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2049993:1
position: 2049993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2005694-2049993:1:exon

Asb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Asb4
product: ankyrin repeat and SOCS box containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005363693.3
SIO_010081: Asb4
subclass of: SO_0000673
so part of: Asb4
location: join(2005694..2006263,2014355..2014654,2038443..2038933,2046498..2046611,2047843..2049993)
location: region:2005694-2049993:1
so has part: feature:2005694-2006263:1:exon
so has part: feature:2014355-2014654:1:exon
so has part: feature:2038443-2038933:1:exon
so has part: feature:2046498-2046611:1:exon
so has part: feature:2047843-2049993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2005694-2006263:1:exon

position:2006263:1
position: 2006263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2014355-2014654:1:exon

position:2014355:1
position: 2014355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014654:1
position: 2014654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2038443-2038933:1:exon

position:2038443:1
position: 2038443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038933:1
position: 2038933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2046498-2046611:1:exon

position:2046498:1
position: 2046498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2046611:1
position: 2046611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2047843-2049993:1:exon

position:2047843:1
position: 2047843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Asb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Asb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 4
translation: MAQRTDGIITPSSKAGAAKLVKKNFLEAIKSNDFRKLETILIQRQLDVDTVFEVEDENMILASYKQGYWLPSYKLKSSWATGLHLAVLFGHVESLTVLLDHNATINCRPNGKTPLHVACEMAHLECVKVLCDRGAKLNCYSLSGHTALHFCTTPDSILCAKQLVRRGANVNMKTNNQDEETPLHTAAHFGLSELVAFYVENGAIVDSLNAHMETPLAIATYWALRFKEQEYSREHHLICRMLLDNNAEVNARDDDFKSPLHKAAWNCDHVLMHMMLEAGAEANMMDINGCAAIQYVLKVTSVRPAAQPELCYQLLLNYGAARIYPPQFHKVIQACHSCPKAIEVVVNAYEHIRWNMKWRRAIPDDVLEKHWDFYHSLFKVCCNTPRTLMHLSRCAIRKALNERCHNAIPLLSLPLPLKKYLLLEPEGIIY
SIO_010081: Asb4
subclass of: SO_0000673
so part of: Asb4
location: join(2006065..2006263,2014355..2014654,2038443..2038933,2046498..2046611,2047843..2048031)
location: region:2006065-2048031:1
so has part: feature:2006065-2006263:1:exon
so has part: feature:2014355-2014654:1:exon
so has part: feature:2038443-2038933:1:exon
so has part: feature:2046498-2046611:1:exon
so has part: feature:2047843-2048031:1:exon

XP_005363750.1
type: Protein
SIO_000068: ncbiprotein

position:2006065:1
position: 2006065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048031:1
position: 2048031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2006065-2006263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2014355-2014654:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2038443-2038933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046498-2046611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2047843-2048031:1:exon

Pdk4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pdk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2087579..2098632)
location: region:2087579-2098632:-1
so has part: feature:2087579-2098632:-1:exon
subclass of: SO_0000010

101999815
type: Gene
SIO_000068: ncbigene

position:2087579:-1
position: 2087579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2098632:-1
position: 2098632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2087579-2098632:-1:exon

Pdk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pdk4
product: pyruvate dehydrogenase kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005363694.2
SIO_010081: Pdk4
subclass of: SO_0000673
so part of: Pdk4
location: complement(join(2087579..2088580,2089552..2089665,2089965..2090075,2090275..2090373,2092010..2092086,2094298..2094375,2094817..2094903,2095062..2095246,2095953..2096024,2097302..2097443,2098325..2098632))
location: region:2087579-2098632:-1
so has part: feature:2098325-2098632:-1:exon
so has part: feature:2097302-2097443:-1:exon
so has part: feature:2095953-2096024:-1:exon
so has part: feature:2095062-2095246:-1:exon
so has part: feature:2094817-2094903:-1:exon
so has part: feature:2094298-2094375:-1:exon
so has part: feature:2092010-2092086:-1:exon
so has part: feature:2090275-2090373:-1:exon
so has part: feature:2089965-2090075:-1:exon
so has part: feature:2089552-2089665:-1:exon
so has part: feature:2087579-2088580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2098325-2098632:-1:exon

position:2098325:-1
position: 2098325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2097302-2097443:-1:exon

position:2097302:-1
position: 2097302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097443:-1
position: 2097443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2095953-2096024:-1:exon

position:2095953:-1
position: 2095953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096024:-1
position: 2096024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2095062-2095246:-1:exon

position:2095062:-1
position: 2095062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2095246:-1
position: 2095246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2094817-2094903:-1:exon

position:2094817:-1
position: 2094817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2094903:-1
position: 2094903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2094298-2094375:-1:exon

position:2094298:-1
position: 2094298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2094375:-1
position: 2094375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2092010-2092086:-1:exon

position:2092010:-1
position: 2092010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2092086:-1
position: 2092086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2090275-2090373:-1:exon

position:2090275:-1
position: 2090275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2090373:-1
position: 2090373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2089965-2090075:-1:exon

position:2089965:-1
position: 2089965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2090075:-1
position: 2090075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2089552-2089665:-1:exon

position:2089552:-1
position: 2089552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2089665:-1
position: 2089665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2087579-2088580:-1:exon

position:2088580:-1
position: 2088580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pdk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pdk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase kinase, isozyme 4
translation: MKAARFVMRSASSLSSAGLVPREVELFSRYSPSPLSMKQLLDFGSENACERTSFSFLRQELPVRLANILKEIDILPQRLVNTPSVQLVKSWYIQSLLDLVEFHEKSPENQKVLSDFVDTLIKVRNRHHNVVPTMAQGILEYKDTCTLDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSKTGNPSHIGSIDPSCDVVAVVQDAFECAKMLCDQYYLTSPELKLTQVNGKFPGQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENRPSLTPVEATVVLGKEDLTIKISDRGGGVPLRITDRLFSYMYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKALSSESVEKLPVFNKSAFKHYQMSSEADDWCIPSKEPKNLAKEKVAV
SIO_010081: Pdk4
subclass of: SO_0000673
so part of: Pdk4
location: complement(join(2088437..2088580,2089552..2089665,2089965..2090075,2090275..2090373,2092010..2092086,2094298..2094375,2094817..2094903,2095062..2095246,2095953..2096024,2097302..2097443,2098325..2098454))
location: region:2088437-2098454:-1
so has part: feature:2098325-2098454:-1:exon
so has part: feature:2097302-2097443:-1:exon
so has part: feature:2095953-2096024:-1:exon
so has part: feature:2095062-2095246:-1:exon
so has part: feature:2094817-2094903:-1:exon
so has part: feature:2094298-2094375:-1:exon
so has part: feature:2092010-2092086:-1:exon
so has part: feature:2090275-2090373:-1:exon
so has part: feature:2089965-2090075:-1:exon
so has part: feature:2089552-2089665:-1:exon
so has part: feature:2088437-2088580:-1:exon

XP_005363751.1
type: Protein
SIO_000068: ncbiprotein

position:2088437:-1
position: 2088437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2098454:-1
position: 2098454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098325-2098454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2097302-2097443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2095953-2096024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2095062-2095246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2094817-2094903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2094298-2094375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2092010-2092086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2090275-2090373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2089965-2090075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2089552-2089665:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2088437-2088580:-1:exon

Dync1i1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2280337..2585070
location: region:2280337-2585070:1
so has part: feature:2280337-2585070:1:exon
subclass of: SO_0000010

102000282
type: Gene
SIO_000068: ncbigene

position:2280337:1
position: 2280337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585070:1
position: 2585070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2280337-2585070:1:exon

Dync1i1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dync1i1
product: dynein cytoplasmic 1 intermediate chain 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005363697.3
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2280337..2280589,2312177..2312293,2319730..2319844,2322410..2322551,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2585070)
location: region:2280337-2585070:1
so has part: feature:2280337-2280589:1:exon
so has part: feature:2312177-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322410-2322551:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2585070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2280337-2280589:1:exon

position:2280589:1
position: 2280589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2312177-2312293:1:exon

position:2312177:1
position: 2312177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312293:1
position: 2312293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2319730-2319844:1:exon

position:2319730:1
position: 2319730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2319844:1
position: 2319844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2322410-2322551:1:exon

position:2322410:1
position: 2322410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2322551:1
position: 2322551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2353786-2353901:1:exon

position:2353786:1
position: 2353786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2353901:1
position: 2353901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2456545-2456634:1:exon

position:2456545:1
position: 2456545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456634:1
position: 2456634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2465304-2465466:1:exon

position:2465304:1
position: 2465304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465466:1
position: 2465466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2467890-2467989:1:exon

position:2467890:1
position: 2467890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467989:1
position: 2467989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2482361-2482486:1:exon

position:2482361:1
position: 2482361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482486:1
position: 2482486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2520598-2520744:1:exon

position:2520598:1
position: 2520598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520744:1
position: 2520744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2525128-2525241:1:exon

position:2525128:1
position: 2525128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2525241:1
position: 2525241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2527791-2527924:1:exon

position:2527791:1
position: 2527791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527924:1
position: 2527924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2531918-2532062:1:exon

position:2531918:1
position: 2531918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532062:1
position: 2532062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2563091-2563231:1:exon

position:2563091:1
position: 2563091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563231:1
position: 2563231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2567190-2567315:1:exon

position:2567190:1
position: 2567190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2567315:1
position: 2567315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2584129-2585070:1:exon

position:2584129:1
position: 2584129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dync1i1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dync1i1
product: dynein cytoplasmic 1 intermediate chain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_013352447.2
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2280338..2280589,2312177..2312293,2319730..2319844,2322410..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2585070)
location: region:2280338-2585070:1
so has part: feature:2280338-2280589:1:exon
so has part: feature:2312177-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322410-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2585070:1:exon

position:2280338:1
position: 2280338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2280338-2280589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2312177-2312293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322410-2322551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2338070-2338129:1:exon

position:2338070:1
position: 2338070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338129:1
position: 2338129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2584129-2585070:1:exon

Dync1i1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dync1i1
product: dynein cytoplasmic 1 intermediate chain 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005363700.3
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2280338..2280589,2312177..2312293,2319730..2319844,2322494..2322551,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2585070)
location: region:2280338-2585070:1
so has part: feature:2280338-2280589:1:exon
so has part: feature:2312177-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322494-2322551:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2585070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2280338-2280589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2312177-2312293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322494-2322551:1:exon

position:2322494:1
position: 2322494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2584129-2585070:1:exon

Dync1i1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dync1i1
product: dynein cytoplasmic 1 intermediate chain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_013352448.2
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2280338..2280589,2312181..2312293,2319730..2319844,2322410..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2585070)
location: region:2280338-2585070:1
so has part: feature:2280338-2280589:1:exon
so has part: feature:2312181-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322410-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2585070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2280338-2280589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2312181-2312293:1:exon

position:2312181:1
position: 2312181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322410-2322551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2338070-2338129:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2584129-2585070:1:exon

Dync1i1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dync1i1
product: dynein cytoplasmic 1 intermediate chain 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005363698.3
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2280339..2280589,2312177..2312293,2319730..2319844,2322494..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2585070)
location: region:2280339-2585070:1
so has part: feature:2280339-2280589:1:exon
so has part: feature:2312177-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322494-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2585070:1:exon

position:2280339:1
position: 2280339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2280339-2280589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2312177-2312293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322494-2322551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2338070-2338129:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2584129-2585070:1:exon

Dync1i1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dync1i1
product: dynein cytoplasmic 1 intermediate chain 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005363699.3
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2280340..2280589,2312177..2312293,2319730..2319844,2322461..2322551,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2585070)
location: region:2280340-2585070:1
so has part: feature:2280340-2280589:1:exon
so has part: feature:2312177-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322461-2322551:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2585070:1:exon

position:2280340:1
position: 2280340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2280340-2280589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2312177-2312293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322461-2322551:1:exon

position:2322461:1
position: 2322461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2584129-2585070:1:exon

Dync1i1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dync1i1
product: dynein cytoplasmic 1 intermediate chain 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005363696.3
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2280341..2280589,2312177..2312293,2319730..2319844,2322461..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2585070)
location: region:2280341-2585070:1
so has part: feature:2280341-2280589:1:exon
so has part: feature:2312177-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322461-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2585070:1:exon

position:2280341:1
position: 2280341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2280341-2280589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2312177-2312293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322461-2322551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2338070-2338129:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2584129-2585070:1:exon

Dync1i1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 1 isoform X1
translation: MSDKSDLKAELERKKQRLAQIREEKKRKEEERKRKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISPEPPLVQPLHFLTWDTCYFHYLVPTPMSPSSKSVSTPSDAGSQDSGDLGPLTRTLQWDTDPSVLQLQSDSELGRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKTGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFSRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTIKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2312186..2312293,2319730..2319844,2322410..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2584239)
location: region:2312186-2584239:1
so has part: feature:2312186-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322410-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2584239:1:exon

XP_013207901.1
type: Protein
SIO_000068: ncbiprotein

position:2312186:1
position: 2312186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2584239:1
position: 2584239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2312186-2312293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322410-2322551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338070-2338129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2584129-2584239:1:exon

Dync1i1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 1 isoform X1
translation: MSDKSDLKAELERKKQRLAQIREEKKRKEEERKRKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISPEPPLVQPLHFLTWDTCYFHYLVPTPMSPSSKSVSTPSDAGSQDSGDLGPLTRTLQWDTDPSVLQLQSDSELGRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKTGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFSRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTIKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2312186..2312293,2319730..2319844,2322410..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2584239)
location: region:2312186-2584239:1
so has part: feature:2312186-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322410-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2584239:1:exon

XP_013207902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2312186-2312293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322410-2322551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338070-2338129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2584129-2584239:1:exon

Dync1i1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 1 isoform X3
translation: MSDKSDLKAELERKKQRLAQIREEKKRKEEERKRKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISPEPPLVQPLHFLTWDTCYFHYLVPTPMSPSSKSVSTPSDAGSQDSGDLGPLTRRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKTGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFSRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTIKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2312186..2312293,2319730..2319844,2322410..2322551,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2584239)
location: region:2312186-2584239:1
so has part: feature:2312186-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322410-2322551:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2584239:1:exon

XP_005363754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2312186-2312293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322410-2322551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2584129-2584239:1:exon

Dync1i1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 1 isoform X2
translation: MSDKSDLKAELERKKQRLAQIREEKKRKEEERKRKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISPEPPLVPTPMSPSSKSVSTPSDAGSQDSGDLGPLTRTLQWDTDPSVLQLQSDSELGRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKTGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFSRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTIKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2312186..2312293,2319730..2319844,2322461..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2584239)
location: region:2312186-2584239:1
so has part: feature:2312186-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322461-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2584239:1:exon

XP_005363753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2312186-2312293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322461-2322551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338070-2338129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2584129-2584239:1:exon

Dync1i1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 1 isoform X5
translation: MSDKSDLKAELERKKQRLAQIREEKKRKEEERKRKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISPEPPLVPTPMSPSSKSVSTPSDAGSQDSGDLGPLTRRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKTGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFSRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTIKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2312186..2312293,2319730..2319844,2322461..2322551,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2584239)
location: region:2312186-2584239:1
so has part: feature:2312186-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322461-2322551:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2584239:1:exon

XP_005363756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2312186-2312293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322461-2322551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2584129-2584239:1:exon

Dync1i1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 1 isoform X4
translation: MSDKSDLKAELERKKQRLAQIREEKKRKEEERKRKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISPEPPLVSTPSDAGSQDSGDLGPLTRTLQWDTDPSVLQLQSDSELGRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKTGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFSRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTIKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2312186..2312293,2319730..2319844,2322494..2322551,2338070..2338129,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2584239)
location: region:2312186-2584239:1
so has part: feature:2312186-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322494-2322551:1:exon
so has part: feature:2338070-2338129:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2584239:1:exon

XP_005363755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2312186-2312293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322494-2322551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338070-2338129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2584129-2584239:1:exon

Dync1i1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dync1i1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 1 isoform X6
translation: MSDKSDLKAELERKKQRLAQIREEKKRKEEERKRKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISPEPPLVSTPSDAGSQDSGDLGPLTRRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKTGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFSRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTIKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
SIO_010081: Dync1i1
subclass of: SO_0000673
so part of: Dync1i1
location: join(2312186..2312293,2319730..2319844,2322494..2322551,2353786..2353901,2456545..2456634,2465304..2465466,2467890..2467989,2482361..2482486,2520598..2520744,2525128..2525241,2527791..2527924,2531918..2532062,2563091..2563231,2567190..2567315,2584129..2584239)
location: region:2312186-2584239:1
so has part: feature:2312186-2312293:1:exon
so has part: feature:2319730-2319844:1:exon
so has part: feature:2322494-2322551:1:exon
so has part: feature:2353786-2353901:1:exon
so has part: feature:2456545-2456634:1:exon
so has part: feature:2465304-2465466:1:exon
so has part: feature:2467890-2467989:1:exon
so has part: feature:2482361-2482486:1:exon
so has part: feature:2520598-2520744:1:exon
so has part: feature:2525128-2525241:1:exon
so has part: feature:2527791-2527924:1:exon
so has part: feature:2531918-2532062:1:exon
so has part: feature:2563091-2563231:1:exon
so has part: feature:2567190-2567315:1:exon
so has part: feature:2584129-2584239:1:exon

XP_005363757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2312186-2312293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2319730-2319844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322494-2322551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2353786-2353901:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2456545-2456634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465304-2465466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467890-2467989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2482361-2482486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2520598-2520744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2525128-2525241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2527791-2527924:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2531918-2532062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2563091-2563231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567190-2567315:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2584129-2584239:1:exon

Slc25a13
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc25a13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2597567..2769889)
location: region:2597567-2769889:-1
so has part: feature:2597567-2769889:-1:exon
subclass of: SO_0000010

102001299
type: Gene
SIO_000068: ncbigene

position:2597567:-1
position: 2597567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2769889:-1
position: 2769889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2597567-2769889:-1:exon

Slc25a13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc25a13
product: solute carrier family 25 member 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005363702.2
SIO_010081: Slc25a13
subclass of: SO_0000673
so part of: Slc25a13
location: complement(join(2597567..2598689,2599094..2599184,2599283..2599441,2607427..2607565,2619279..2619419,2643968..2644048,2645510..2645562,2658001..2658159,2658579..2658663,2662476..2662560,2662778..2662871,2663618..2663756,2666323..2666469,2681906..2682045,2702514..2702629,2728000..2728142,2739882..2739935,2769650..2769889))
location: region:2597567-2769889:-1
so has part: feature:2769650-2769889:-1:exon
so has part: feature:2739882-2739935:-1:exon
so has part: feature:2728000-2728142:-1:exon
so has part: feature:2702514-2702629:-1:exon
so has part: feature:2681906-2682045:-1:exon
so has part: feature:2666323-2666469:-1:exon
so has part: feature:2663618-2663756:-1:exon
so has part: feature:2662778-2662871:-1:exon
so has part: feature:2662476-2662560:-1:exon
so has part: feature:2658579-2658663:-1:exon
so has part: feature:2658001-2658159:-1:exon
so has part: feature:2645510-2645562:-1:exon
so has part: feature:2643968-2644048:-1:exon
so has part: feature:2619279-2619419:-1:exon
so has part: feature:2607427-2607565:-1:exon
so has part: feature:2599283-2599441:-1:exon
so has part: feature:2599094-2599184:-1:exon
so has part: feature:2597567-2598689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2769650-2769889:-1:exon

position:2769650:-1
position: 2769650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2739882-2739935:-1:exon

position:2739882:-1
position: 2739882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739935:-1
position: 2739935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2728000-2728142:-1:exon

position:2728000:-1
position: 2728000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728142:-1
position: 2728142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2702514-2702629:-1:exon

position:2702514:-1
position: 2702514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702629:-1
position: 2702629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2681906-2682045:-1:exon

position:2681906:-1
position: 2681906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2682045:-1
position: 2682045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2666323-2666469:-1:exon

position:2666323:-1
position: 2666323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666469:-1
position: 2666469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2663618-2663756:-1:exon

position:2663618:-1
position: 2663618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2663756:-1
position: 2663756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2662778-2662871:-1:exon

position:2662778:-1
position: 2662778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662871:-1
position: 2662871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2662476-2662560:-1:exon

position:2662476:-1
position: 2662476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662560:-1
position: 2662560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2658579-2658663:-1:exon

position:2658579:-1
position: 2658579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2658663:-1
position: 2658663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2658001-2658159:-1:exon

position:2658001:-1
position: 2658001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2658159:-1
position: 2658159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2645510-2645562:-1:exon

position:2645510:-1
position: 2645510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2645562:-1
position: 2645562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2643968-2644048:-1:exon

position:2643968:-1
position: 2643968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2644048:-1
position: 2644048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2619279-2619419:-1:exon

position:2619279:-1
position: 2619279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619419:-1
position: 2619419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2607427-2607565:-1:exon

position:2607427:-1
position: 2607427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607565:-1
position: 2607565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2599283-2599441:-1:exon

position:2599283:-1
position: 2599283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2599441:-1
position: 2599441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2599094-2599184:-1:exon

position:2599094:-1
position: 2599094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2599184:-1
position: 2599184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2597567-2598689:-1:exon

position:2598689:-1
position: 2598689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc25a13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc25a13
product: solute carrier family 25 member 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_026787536.1
SIO_010081: Slc25a13
subclass of: SO_0000673
so part of: Slc25a13
location: complement(join(2597567..2598689,2599094..2599184,2599283..2599441,2607427..2607565,2619279..2619419,2643968..2644048,2645510..2645562,2658001..2658159,2658579..2658663,2662476..2662560,2662778..2662871,2663618..2663756,2666323..2666469,2681906..2682045,2702514..2702629,2728000..2728142,2739882..2739935,2744696..2744746))
location: region:2597567-2744746:-1
so has part: feature:2744696-2744746:-1:exon
so has part: feature:2739882-2739935:-1:exon
so has part: feature:2728000-2728142:-1:exon
so has part: feature:2702514-2702629:-1:exon
so has part: feature:2681906-2682045:-1:exon
so has part: feature:2666323-2666469:-1:exon
so has part: feature:2663618-2663756:-1:exon
so has part: feature:2662778-2662871:-1:exon
so has part: feature:2662476-2662560:-1:exon
so has part: feature:2658579-2658663:-1:exon
so has part: feature:2658001-2658159:-1:exon
so has part: feature:2645510-2645562:-1:exon
so has part: feature:2643968-2644048:-1:exon
so has part: feature:2619279-2619419:-1:exon
so has part: feature:2607427-2607565:-1:exon
so has part: feature:2599283-2599441:-1:exon
so has part: feature:2599094-2599184:-1:exon
so has part: feature:2597567-2598689:-1:exon

position:2744746:-1
position: 2744746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2744696-2744746:-1:exon

position:2744696:-1
position: 2744696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2739882-2739935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728000-2728142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2702514-2702629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2681906-2682045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2666323-2666469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2663618-2663756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2662778-2662871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2662476-2662560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2658579-2658663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2658001-2658159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2645510-2645562:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2643968-2644048:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2619279-2619419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2607427-2607565:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2599283-2599441:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2599094-2599184:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2597567-2598689:-1:exon

Slc25a13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc25a13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein Aralar2 isoform X2
translation: MAAAKVALTKRADPAELRPIFLKYASIEKNGEFFMSPNDFVTRYLNIFGENQPNPKTVELLSGVVDQTKDGLISFQEFVAFESVLCAPDALFMVAFQLFDKTGKGEVTFEDVKQVFGQTTIHQHIPFNWDSEFVQLHFGKERQRHLNYAEFTQFLLEIQLEHAKQAFVQRDSGKNGKVTAIDFRDIMVTIRPHVLTPFVEECLVAAAGGTRSHQVSFSYFNGFNSLLNNMELIRKIYSTLAGSRKDVEVTKEEFALAAQKFGQVTPMEVDILFQLADLYEPRGRMTLADIERIAPLEEGMLPFNLAEAQRQKASGDTARPFLLQLAESAYRFGLGSIAGAVGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFMHKDGSVPLSAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALSVVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASLANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYSGVTDCFRKILREEGPKALWKGAAARVFRSSPQFGVTLLTYELLQRWFYVDFGGVKPMGSEPVPKSRITLPAPNPDHVGGYKLAVATFAGIENRFGLYLPLFKPSASTSNVTAGGP
SIO_010081: Slc25a13
subclass of: SO_0000673
so part of: Slc25a13
location: complement(join(2598503..2598689,2599094..2599184,2599283..2599441,2607427..2607565,2619279..2619419,2643968..2644048,2645510..2645562,2658001..2658159,2658579..2658663,2662476..2662560,2662778..2662871,2663618..2663756,2666323..2666469,2681906..2682045,2702514..2702629,2728000..2728142,2739882..2739935,2769650..2769664))
location: region:2598503-2769664:-1
so has part: feature:2769650-2769664:-1:exon
so has part: feature:2739882-2739935:-1:exon
so has part: feature:2728000-2728142:-1:exon
so has part: feature:2702514-2702629:-1:exon
so has part: feature:2681906-2682045:-1:exon
so has part: feature:2666323-2666469:-1:exon
so has part: feature:2663618-2663756:-1:exon
so has part: feature:2662778-2662871:-1:exon
so has part: feature:2662476-2662560:-1:exon
so has part: feature:2658579-2658663:-1:exon
so has part: feature:2658001-2658159:-1:exon
so has part: feature:2645510-2645562:-1:exon
so has part: feature:2643968-2644048:-1:exon
so has part: feature:2619279-2619419:-1:exon
so has part: feature:2607427-2607565:-1:exon
so has part: feature:2599283-2599441:-1:exon
so has part: feature:2599094-2599184:-1:exon
so has part: feature:2598503-2598689:-1:exon

XP_005363759.1
type: Protein
SIO_000068: ncbiprotein

position:2598503:-1
position: 2598503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2769664:-1
position: 2769664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2769650-2769664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2739882-2739935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728000-2728142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2702514-2702629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2681906-2682045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2666323-2666469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2663618-2663756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2662778-2662871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2662476-2662560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2658579-2658663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2658001-2658159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2645510-2645562:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2643968-2644048:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2619279-2619419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2607427-2607565:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2599283-2599441:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2599094-2599184:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2598503-2598689:-1:exon

Slc25a13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc25a13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein Aralar2 isoform X1
translation: MSLALWLDSRVALTKRADPAELRPIFLKYASIEKNGEFFMSPNDFVTRYLNIFGENQPNPKTVELLSGVVDQTKDGLISFQEFVAFESVLCAPDALFMVAFQLFDKTGKGEVTFEDVKQVFGQTTIHQHIPFNWDSEFVQLHFGKERQRHLNYAEFTQFLLEIQLEHAKQAFVQRDSGKNGKVTAIDFRDIMVTIRPHVLTPFVEECLVAAAGGTRSHQVSFSYFNGFNSLLNNMELIRKIYSTLAGSRKDVEVTKEEFALAAQKFGQVTPMEVDILFQLADLYEPRGRMTLADIERIAPLEEGMLPFNLAEAQRQKASGDTARPFLLQLAESAYRFGLGSIAGAVGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFMHKDGSVPLSAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALSVVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASLANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYSGVTDCFRKILREEGPKALWKGAAARVFRSSPQFGVTLLTYELLQRWFYVDFGGVKPMGSEPVPKSRITLPAPNPDHVGGYKLAVATFAGIENRFGLYLPLFKPSASTSNVTAGGP
SIO_010081: Slc25a13
subclass of: SO_0000673
so part of: Slc25a13
location: complement(join(2598503..2598689,2599094..2599184,2599283..2599441,2607427..2607565,2619279..2619419,2643968..2644048,2645510..2645562,2658001..2658159,2658579..2658663,2662476..2662560,2662778..2662871,2663618..2663756,2666323..2666469,2681906..2682045,2702514..2702629,2728000..2728142,2739882..2739935,2744696..2744725))
location: region:2598503-2744725:-1
so has part: feature:2744696-2744725:-1:exon
so has part: feature:2739882-2739935:-1:exon
so has part: feature:2728000-2728142:-1:exon
so has part: feature:2702514-2702629:-1:exon
so has part: feature:2681906-2682045:-1:exon
so has part: feature:2666323-2666469:-1:exon
so has part: feature:2663618-2663756:-1:exon
so has part: feature:2662778-2662871:-1:exon
so has part: feature:2662476-2662560:-1:exon
so has part: feature:2658579-2658663:-1:exon
so has part: feature:2658001-2658159:-1:exon
so has part: feature:2645510-2645562:-1:exon
so has part: feature:2643968-2644048:-1:exon
so has part: feature:2619279-2619419:-1:exon
so has part: feature:2607427-2607565:-1:exon
so has part: feature:2599283-2599441:-1:exon
so has part: feature:2599094-2599184:-1:exon
so has part: feature:2598503-2598689:-1:exon

XP_026643337.1
type: Protein
SIO_000068: ncbiprotein

position:2744725:-1
position: 2744725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2744696-2744725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2739882-2739935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2728000-2728142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2702514-2702629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2681906-2682045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2666323-2666469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2663618-2663756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2662778-2662871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2662476-2662560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2658579-2658663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2658001-2658159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2645510-2645562:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2643968-2644048:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2619279-2619419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2607427-2607565:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2599283-2599441:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2599094-2599184:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2598503-2598689:-1:exon

LOC102001770
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102001770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2883056..2883577)
location: region:2883056-2883577:-1
so has part: feature:2883056-2883577:-1:exon

102001770
type: Gene
SIO_000068: ncbigene

position:2883056:-1
position: 2883056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2883577:-1
position: 2883577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883056-2883577:-1:exon

LOC102001770
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102001770
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102001770
subclass of: SO_0000673
so part of: LOC102001770
location: complement(2883056..2883577)
location: region:2883056-2883577:-1
so has part: feature:2883056-2883577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883056-2883577:-1:exon

LOC101979985
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2993259..2994525
location: region:2993259-2994525:1
so has part: feature:2993259-2994525:1:exon

101979985
type: Gene
SIO_000068: ncbigene

position:2993259:1
position: 2993259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2994525:1
position: 2994525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2993259-2994525:1:exon

LOC101979985
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979985
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC101979985
subclass of: SO_0000673
so part of: LOC101979985
location: 2993259..2993702
location: region:2993259-2993702:1
so has part: feature:2993259-2993702:1:exon

position:2993702:1
position: 2993702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2993259-2993702:1:exon

LOC101979985
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979985
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC101979985
subclass of: SO_0000673
so part of: LOC101979985
location: 2993928..2994525
location: region:2993928-2994525:1
so has part: feature:2993928-2994525:1:exon

position:2993928:1
position: 2993928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2993928-2994525:1:exon

LOC102002037
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102002037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3129648..3145319)
location: region:3129648-3145319:-1
so has part: feature:3129648-3145319:-1:exon
subclass of: SO_0000011

102002037
type: Gene
SIO_000068: ncbigene

position:3129648:-1
position: 3129648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3145319:-1
position: 3145319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3129648-3145319:-1:exon

LOC102002037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC102002037
product: uncharacterized LOC102002037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_258726.2
SIO_010081: LOC102002037
subclass of: SO_0000673
so part of: LOC102002037
location: complement(join(3129648..3129828,3131804..3131897,3145123..3145319))
location: region:3129648-3145319:-1
so has part: feature:3145123-3145319:-1:exon
so has part: feature:3131804-3131897:-1:exon
so has part: feature:3129648-3129828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3145123-3145319:-1:exon

position:3145123:-1
position: 3145123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3131804-3131897:-1:exon

position:3131804:-1
position: 3131804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3131897:-1
position: 3131897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3129648-3129828:-1:exon

position:3129828:-1
position: 3129828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106144249
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3395655..3433017)
location: region:3395655-3433017:-1
so has part: feature:3395655-3433017:-1:exon
subclass of: SO_0000011

106144249
type: Gene
SIO_000068: ncbigene

position:3395655:-1
position: 3395655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433017:-1
position: 3433017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3395655-3433017:-1:exon

LOC106144249
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC106144249
product: uncharacterized LOC106144249
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003378392.1
SIO_010081: LOC106144249
subclass of: SO_0000673
so part of: LOC106144249
location: complement(join(3395655..3396941,3405506..3405578,3432723..3433017))
location: region:3395655-3433017:-1
so has part: feature:3432723-3433017:-1:exon
so has part: feature:3405506-3405578:-1:exon
so has part: feature:3395655-3396941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3432723-3433017:-1:exon

position:3432723:-1
position: 3432723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3405506-3405578:-1:exon

position:3405506:-1
position: 3405506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3405578:-1
position: 3405578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3395655-3396941:-1:exon

position:3396941:-1
position: 3396941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dlx6
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Dlx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3434236..3438794
location: region:3434236-3438794:1
so has part: feature:3434236-3438794:1:exon
subclass of: SO_0000010

102002224
type: Gene
SIO_000068: ncbigene

position:3434236:1
position: 3434236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438794:1
position: 3438794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3434236-3438794:1:exon

Dlx6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dlx6
product: distal-less homeobox 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005363703.2
SIO_010081: Dlx6
subclass of: SO_0000673
so part of: Dlx6
location: join(3434236..3435058,3436291..3436484,3438354..3438794)
location: region:3434236-3438794:1
so has part: feature:3434236-3435058:1:exon
so has part: feature:3436291-3436484:1:exon
so has part: feature:3438354-3438794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3434236-3435058:1:exon

position:3435058:1
position: 3435058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3436291-3436484:1:exon

position:3436291:1
position: 3436291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3436484:1
position: 3436484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3438354-3438794:1:exon

position:3438354:1
position: 3438354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dlx6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dlx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein DLX-6
translation: MMTMTTMADGLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPQPHSQQTSPAMAGAHYPLHCLHSAAAAAAAAGSHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHSQHSPYLQSYHNSSAAAQTRGDDTDQQKTTVIENGEIRFNGKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLPGSAALSPRSPALPPVWDVSASTKGVSMPPNSYMPGYSPWYSSPHQDTMQRPQMM
SIO_010081: Dlx6
subclass of: SO_0000673
so part of: Dlx6
location: join(3434614..3435058,3436291..3436484,3438354..3438605)
location: region:3434614-3438605:1
so has part: feature:3434614-3435058:1:exon
so has part: feature:3436291-3436484:1:exon
so has part: feature:3438354-3438605:1:exon

XP_005363760.1
type: Protein
SIO_000068: ncbiprotein

position:3434614:1
position: 3434614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438605:1
position: 3438605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3434614-3435058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3436291-3436484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3438354-3438605:1:exon

Dlx5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Dlx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3448783..3453273)
location: region:3448783-3453273:-1
so has part: feature:3448783-3453273:-1:exon
subclass of: SO_0000010

102002501
type: Gene
SIO_000068: ncbigene

position:3448783:-1
position: 3448783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3453273:-1
position: 3453273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3448783-3453273:-1:exon

Dlx5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dlx5
product: distal-less homeobox 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005363704.3
SIO_010081: Dlx5
subclass of: SO_0000673
so part of: Dlx5
location: complement(join(3448783..3449681,3450746..3450930,3452756..3453272))
location: region:3448783-3453272:-1
so has part: feature:3452756-3453272:-1:exon
so has part: feature:3450746-3450930:-1:exon
so has part: feature:3448783-3449681:-1:exon

position:3453272:-1
position: 3453272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3452756-3453272:-1:exon

position:3452756:-1
position: 3452756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3450746-3450930:-1:exon

position:3450746:-1
position: 3450746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450930:-1
position: 3450930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3448783-3449681:-1:exon

position:3449681:-1
position: 3449681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dlx5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dlx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein DLX-5 isoform X1
translation: MTGVFDRRVPSIRSGDFQAPFPTSAAMHHPSQESPTLPESSATDSDYYSPAGAAPHGYCSPTSASYGKALNPYQYQYHGVNGSAAGYPPKAYADYSYASPYHQYGGAYNRVPSATSQPEKEVAEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYPSAASSINSHLPPPGSLQHPLALASGTLY
SIO_010081: Dlx5
subclass of: SO_0000673
so part of: Dlx5
location: complement(join(3449352..3449681,3450746..3450930,3452756..3453110))
location: region:3449352-3453110:-1
so has part: feature:3452756-3453110:-1:exon
so has part: feature:3450746-3450930:-1:exon
so has part: feature:3449352-3449681:-1:exon

XP_005363761.1
type: Protein
SIO_000068: ncbiprotein

position:3449352:-1
position: 3449352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3453110:-1
position: 3453110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3452756-3453110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3450746-3450930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3449352-3449681:-1:exon

Dlx5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dlx5
product: distal-less homeobox 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013352439.2
SIO_010081: Dlx5
subclass of: SO_0000673
so part of: Dlx5
location: complement(join(3450763..3450848,3452756..3453273))
location: region:3450763-3453273:-1
so has part: feature:3452756-3453273:-1:exon
so has part: feature:3450763-3450848:-1:exon

position:3450763:-1
position: 3450763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3452756-3453273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3450763-3450848:-1:exon

position:3450848:-1
position: 3450848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dlx5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dlx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein DLX-5 isoform X2
translation: MTGVFDRRVPSIRSGDFQAPFPTSAAMHHPSQESPTLPESSATDSDYYSPAGAAPHGYCSPTSASYGKALNPYQYQYHGVNGSAAGYPPKAYADYSYASPYHQYGGAYNRVPSATSQPAFSWPHYREGFRRLSTSPCQNAPSWLPL
SIO_010081: Dlx5
subclass of: SO_0000673
so part of: Dlx5
location: complement(join(3450763..3450848,3452756..3453110))
location: region:3450763-3453110:-1
so has part: feature:3452756-3453110:-1:exon
so has part: feature:3450763-3450848:-1:exon

XP_013207893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3452756-3453110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3450763-3450848:-1:exon

LOC101980275
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3462202..3463122)
location: region:3462202-3463122:-1
so has part: feature:3462202-3463122:-1:exon

101980275
type: Gene
SIO_000068: ncbigene

position:3462202:-1
position: 3462202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3463122:-1
position: 3463122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3462202-3463122:-1:exon

LOC101980275
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980275
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins
pseudo: true
SIO_010081: LOC101980275
subclass of: SO_0000673
so part of: LOC101980275
location: complement(3462202..3463122)
location: region:3462202-3463122:-1
so has part: feature:3462202-3463122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3462202-3463122:-1:exon

LOC101980555
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3491181..3493055)
location: region:3491181-3493055:-1
so has part: feature:3491181-3493055:-1:exon

101980555
type: Gene
SIO_000068: ncbigene

position:3491181:-1
position: 3491181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3493055:-1
position: 3493055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491181-3493055:-1:exon

LOC101980555
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980555
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101980555
subclass of: SO_0000673
so part of: LOC101980555
location: complement(3491181..3491217)
location: region:3491181-3491217:-1
so has part: feature:3491181-3491217:-1:exon

position:3491217:-1
position: 3491217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491181-3491217:-1:exon

LOC101980555
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980555
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101980555
subclass of: SO_0000673
so part of: LOC101980555
location: complement(3492546..3492912)
location: region:3492546-3492912:-1
so has part: feature:3492546-3492912:-1:exon

position:3492546:-1
position: 3492546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3492912:-1
position: 3492912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3492546-3492912:-1:exon

LOC101980555
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980555
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101980555
subclass of: SO_0000673
so part of: LOC101980555
location: complement(3493031..3493055)
location: region:3493031-3493055:-1
so has part: feature:3493031-3493055:-1:exon

position:3493031:-1
position: 3493031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3493031-3493055:-1:exon

LOC102002967
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102002967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3516721..3517004)
location: region:3516721-3517004:-1
so has part: feature:3516721-3517004:-1:exon

102002967
type: Gene
SIO_000068: ncbigene

position:3516721:-1
position: 3516721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3517004:-1
position: 3517004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3516721-3517004:-1:exon

LOC102002967
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102002967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102002967
subclass of: SO_0000673
so part of: LOC102002967
location: complement(3516721..3517004)
location: region:3516721-3517004:-1
so has part: feature:3516721-3517004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3516721-3517004:-1:exon

Sdhaf3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sdhaf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3528353..3572652
location: region:3528353-3572652:1
so has part: feature:3528353-3572652:1:exon
subclass of: SO_0000010

101979139
type: Gene
SIO_000068: ncbigene

position:3528353:1
position: 3528353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3572652:1
position: 3572652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3528353-3572652:1:exon

Sdhaf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sdhaf3
product: succinate dehydrogenase complex assembly factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005363707.3
SIO_010081: Sdhaf3
subclass of: SO_0000673
so part of: Sdhaf3
location: join(3528353..3528563,3572085..3572652)
location: region:3528353-3572652:1
so has part: feature:3528353-3528563:1:exon
so has part: feature:3572085-3572652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3528353-3528563:1:exon

position:3528563:1
position: 3528563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3572085-3572652:1:exon

position:3572085:1
position: 3572085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sdhaf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sdhaf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase assembly factor 3, mitochondrial
translation: MPGRHVLRVRALYKRILQLHRALPPDLKALGDQYVKDEFRRHKTVGSGEAQRFLQEWEAYAAVLQQQAKDSRHSSTGIACFGTSLPEEKLNDFRDEQIGQLQELMQEATKPNRQFSITESTKPKL
SIO_010081: Sdhaf3
subclass of: SO_0000673
so part of: Sdhaf3
location: join(3528390..3528563,3572085..3572288)
location: region:3528390-3572288:1
so has part: feature:3528390-3528563:1:exon
so has part: feature:3572085-3572288:1:exon

XP_005363764.1
type: Protein
SIO_000068: ncbiprotein

position:3528390:1
position: 3528390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3572288:1
position: 3572288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3528390-3528563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3572085-3572288:1:exon

Tac1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3968322..3976476
location: region:3968322-3976476:1
so has part: feature:3968322-3976476:1:exon
subclass of: SO_0000010

101979426
type: Gene
SIO_000068: ncbigene

position:3968322:1
position: 3968322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3976476:1
position: 3976476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968322-3976476:1:exon

Tac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tac1
product: tachykinin precursor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005363708.3
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3968322..3968714,3969135..3969266,3970140..3970236,3970681..3970725,3971155..3971178,3972499..3972552,3975915..3976476)
location: region:3968322-3976476:1
so has part: feature:3968322-3968714:1:exon
so has part: feature:3969135-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3970681-3970725:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3976476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3968322-3968714:1:exon

position:3968714:1
position: 3968714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3969135-3969266:1:exon

position:3969135:1
position: 3969135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3969266:1
position: 3969266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3970140-3970236:1:exon

position:3970140:1
position: 3970140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3970236:1
position: 3970236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3970681-3970725:1:exon

position:3970681:1
position: 3970681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3970725:1
position: 3970725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3971155-3971178:1:exon

position:3971155:1
position: 3971155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971178:1
position: 3971178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3972499-3972552:1:exon

position:3972499:1
position: 3972499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3972552:1
position: 3972552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3975915-3976476:1:exon

position:3975915:1
position: 3975915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tac1
product: tachykinin precursor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005363709.3
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3968331..3968714,3969135..3969266,3970140..3970236,3971155..3971178,3972499..3972552,3975915..3976476)
location: region:3968331-3976476:1
so has part: feature:3968331-3968714:1:exon
so has part: feature:3969135-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3976476:1:exon

position:3968331:1
position: 3968331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968331-3968714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3969135-3969266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970140-3970236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3971155-3971178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3972499-3972552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3975915-3976476:1:exon

Tac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tac1
product: tachykinin precursor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026787537.1
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3968940..3968975,3969135..3969266,3970140..3970236,3970681..3970725,3971155..3971178,3972499..3972552,3975915..3976476)
location: region:3968940-3976476:1
so has part: feature:3968940-3968975:1:exon
so has part: feature:3969135-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3970681-3970725:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3976476:1:exon

position:3968940:1
position: 3968940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968940-3968975:1:exon

position:3968975:1
position: 3968975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3969135-3969266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970140-3970236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3970681-3970725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3971155-3971178:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3972499-3972552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3975915-3976476:1:exon

Tac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tac1
product: tachykinin precursor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_013352437.2
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3968941..3968975,3969135..3969266,3970140..3970236,3971155..3971178,3972499..3972552,3975915..3976476)
location: region:3968941-3976476:1
so has part: feature:3968941-3968975:1:exon
so has part: feature:3969135-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3976476:1:exon

position:3968941:1
position: 3968941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968941-3968975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3969135-3969266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970140-3970236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3971155-3971178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3972499-3972552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3975915-3976476:1:exon

Tac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protachykinin-1 isoform X1
translation: MKILVAVAVFFLLSTQLFAEEIGANDDLNYWSDWSDGDQIKEALPDPFEHLLQRIARRPKPQQFFGLMGKRDADSSIEKQVALLKALYGHGQISHKRHKTDSFVGLMGKRALNSVAYERKAMQSYDRRRK
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3969144..3969266,3970140..3970236,3970681..3970725,3971155..3971178,3972499..3972552,3975915..3975964)
location: region:3969144-3975964:1
so has part: feature:3969144-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3970681-3970725:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3975964:1:exon

XP_026643338.1
type: Protein
SIO_000068: ncbiprotein

position:3969144:1
position: 3969144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3975964:1
position: 3975964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3969144-3969266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3970140-3970236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970681-3970725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3971155-3971178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3972499-3972552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3975915-3975964:1:exon

Tac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protachykinin-1 isoform X1
translation: MKILVAVAVFFLLSTQLFAEEIGANDDLNYWSDWSDGDQIKEALPDPFEHLLQRIARRPKPQQFFGLMGKRDADSSIEKQVALLKALYGHGQISHKRHKTDSFVGLMGKRALNSVAYERKAMQSYDRRRK
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3969144..3969266,3970140..3970236,3970681..3970725,3971155..3971178,3972499..3972552,3975915..3975964)
location: region:3969144-3975964:1
so has part: feature:3969144-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3970681-3970725:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3975964:1:exon

XP_005363765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3969144-3969266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3970140-3970236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970681-3970725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3971155-3971178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3972499-3972552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3975915-3975964:1:exon

Tac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protachykinin-1 isoform X2
translation: MKILVAVAVFFLLSTQLFAEEIGANDDLNYWSDWSDGDQIKEALPDPFEHLLQRIARRPKPQQFFGLMGKRDAGHGQISHKRHKTDSFVGLMGKRALNSVAYERKAMQSYDRRRK
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3969144..3969266,3970140..3970236,3971155..3971178,3972499..3972552,3975915..3975964)
location: region:3969144-3975964:1
so has part: feature:3969144-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3975964:1:exon

XP_005363766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3969144-3969266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3970140-3970236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3971155-3971178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3972499-3972552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3975915-3975964:1:exon

Tac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protachykinin-1 isoform X2
translation: MKILVAVAVFFLLSTQLFAEEIGANDDLNYWSDWSDGDQIKEALPDPFEHLLQRIARRPKPQQFFGLMGKRDAGHGQISHKRHKTDSFVGLMGKRALNSVAYERKAMQSYDRRRK
SIO_010081: Tac1
subclass of: SO_0000673
so part of: Tac1
location: join(3969144..3969266,3970140..3970236,3971155..3971178,3972499..3972552,3975915..3975964)
location: region:3969144-3975964:1
so has part: feature:3969144-3969266:1:exon
so has part: feature:3970140-3970236:1:exon
so has part: feature:3971155-3971178:1:exon
so has part: feature:3972499-3972552:1:exon
so has part: feature:3975915-3975964:1:exon

XP_013207891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3969144-3969266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3970140-3970236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3971155-3971178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3972499-3972552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3975915-3975964:1:exon

LOC101980825
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4031350..4032248
location: region:4031350-4032248:1
so has part: feature:4031350-4032248:1:exon

101980825
type: Gene
SIO_000068: ncbigene

position:4031350:1
position: 4031350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4032248:1
position: 4032248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4031350-4032248:1:exon

LOC101980825
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980825
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC101980825
subclass of: SO_0000673
so part of: LOC101980825
location: 4031350..4031573
location: region:4031350-4031573:1
so has part: feature:4031350-4031573:1:exon

position:4031573:1
position: 4031573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4031350-4031573:1:exon

LOC101980825
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980825
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC101980825
subclass of: SO_0000673
so part of: LOC101980825
location: 4031727..4032248
location: region:4031727-4032248:1
so has part: feature:4031727-4032248:1:exon

position:4031727:1
position: 4031727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4031727-4032248:1:exon

Asns
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Asns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4056422..4075089)
location: region:4056422-4075089:-1
so has part: feature:4056422-4075089:-1:exon
subclass of: SO_0000010

101979896
type: Gene
SIO_000068: ncbigene

position:4056422:-1
position: 4056422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4075089:-1
position: 4075089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4056422-4075089:-1:exon

Asns
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Asns
product: asparagine synthetase (glutamine-hydrolyzing), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005363711.2
SIO_010081: Asns
subclass of: SO_0000673
so part of: Asns
location: complement(join(4056422..4056771,4057153..4057308,4057399..4057480,4058324..4058424,4059257..4059363,4062230..4062356,4063677..4063804,4064159..4064260,4064453..4064638,4068047..4068284,4071438..4071709,4075034..4075089))
location: region:4056422-4075089:-1
so has part: feature:4075034-4075089:-1:exon
so has part: feature:4071438-4071709:-1:exon
so has part: feature:4068047-4068284:-1:exon
so has part: feature:4064453-4064638:-1:exon
so has part: feature:4064159-4064260:-1:exon
so has part: feature:4063677-4063804:-1:exon
so has part: feature:4062230-4062356:-1:exon
so has part: feature:4059257-4059363:-1:exon
so has part: feature:4058324-4058424:-1:exon
so has part: feature:4057399-4057480:-1:exon
so has part: feature:4057153-4057308:-1:exon
so has part: feature:4056422-4056771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4075034-4075089:-1:exon

position:4075034:-1
position: 4075034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4071438-4071709:-1:exon

position:4071438:-1
position: 4071438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071709:-1
position: 4071709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4068047-4068284:-1:exon

position:4068047:-1
position: 4068047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4068284:-1
position: 4068284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4064453-4064638:-1:exon

position:4064453:-1
position: 4064453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064638:-1
position: 4064638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4064159-4064260:-1:exon

position:4064159:-1
position: 4064159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064260:-1
position: 4064260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4063677-4063804:-1:exon

position:4063677:-1
position: 4063677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4063804:-1
position: 4063804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4062230-4062356:-1:exon

position:4062230:-1
position: 4062230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4062356:-1
position: 4062356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4059257-4059363:-1:exon

position:4059257:-1
position: 4059257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059363:-1
position: 4059363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4058324-4058424:-1:exon

position:4058324:-1
position: 4058324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4058424:-1
position: 4058424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4057399-4057480:-1:exon

position:4057399:-1
position: 4057399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4057480:-1
position: 4057480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4057153-4057308:-1:exon

position:4057153:-1
position: 4057153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4057308:-1
position: 4057308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4056422-4056771:-1:exon

position:4056771:-1
position: 4056771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Asns
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Asns
product: asparagine synthetase (glutamine-hydrolyzing), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005363710.3
SIO_010081: Asns
subclass of: SO_0000673
so part of: Asns
location: complement(join(4056422..4056771,4057153..4057308,4057399..4057480,4058324..4058424,4059257..4059363,4062230..4062356,4063677..4063804,4064159..4064260,4064453..4064638,4068047..4068284,4071438..4071709,4074952..4075027))
location: region:4056422-4075027:-1
so has part: feature:4074952-4075027:-1:exon
so has part: feature:4071438-4071709:-1:exon
so has part: feature:4068047-4068284:-1:exon
so has part: feature:4064453-4064638:-1:exon
so has part: feature:4064159-4064260:-1:exon
so has part: feature:4063677-4063804:-1:exon
so has part: feature:4062230-4062356:-1:exon
so has part: feature:4059257-4059363:-1:exon
so has part: feature:4058324-4058424:-1:exon
so has part: feature:4057399-4057480:-1:exon
so has part: feature:4057153-4057308:-1:exon
so has part: feature:4056422-4056771:-1:exon

position:4075027:-1
position: 4075027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4074952-4075027:-1:exon

position:4074952:-1
position: 4074952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4071438-4071709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4068047-4068284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064453-4064638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4064159-4064260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4063677-4063804:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4062230-4062356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4059257-4059363:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4058324-4058424:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4057399-4057480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4057153-4057308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4056422-4056771:-1:exon

Asns
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Asns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asparagine synthetase [glutamine-hydrolyzing]
translation: MCGIWALFGSDDCLSVQCLSAMKIAHRGPDAFRFENVNGYTNCCFGFHRLAVVDPLFGMQPLRVRKYPYLWLCYNGEIYNHKALQERFEFEYQTNVDGEVILHLYDKGGIEQTISMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLAVCSEAKGLISLKHSSAPFLKVEPFLPGHYEVLDLKPNGKVASVEMVKYHHCTDEPLHALYDSVEKLFPGFELETVKSNLRILFDNAIRKRLMTDRRIGCLLSGGLDSSLVAASLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVANYIGSEHHEVLFNSEEGIQALDEVIFSLETYDITTVRASVGMYLISKYIRKNTDSVVIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRIPKNGIEKHLLRETFEDSNLLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDAMMATAAQRFPFNTPQTKEGYYYRQIFERHYPGRADWLTHYWMPKWINATDPSARTLSHYKSVAEA
SIO_010081: Asns
subclass of: SO_0000673
so part of: Asns
location: complement(join(4056562..4056771,4057153..4057308,4057399..4057480,4058324..4058424,4059257..4059363,4062230..4062356,4063677..4063804,4064159..4064260,4064453..4064638,4068047..4068284,4071438..4071686))
location: region:4056562-4071686:-1
so has part: feature:4071438-4071686:-1:exon
so has part: feature:4068047-4068284:-1:exon
so has part: feature:4064453-4064638:-1:exon
so has part: feature:4064159-4064260:-1:exon
so has part: feature:4063677-4063804:-1:exon
so has part: feature:4062230-4062356:-1:exon
so has part: feature:4059257-4059363:-1:exon
so has part: feature:4058324-4058424:-1:exon
so has part: feature:4057399-4057480:-1:exon
so has part: feature:4057153-4057308:-1:exon
so has part: feature:4056562-4056771:-1:exon

XP_005363767.1
type: Protein
SIO_000068: ncbiprotein

position:4056562:-1
position: 4056562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071686:-1
position: 4071686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071438-4071686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4068047-4068284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4064453-4064638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064159-4064260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4063677-4063804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4062230-4062356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4059257-4059363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4058324-4058424:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4057399-4057480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4057153-4057308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4056562-4056771:-1:exon

Asns
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Asns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asparagine synthetase [glutamine-hydrolyzing]
translation: MCGIWALFGSDDCLSVQCLSAMKIAHRGPDAFRFENVNGYTNCCFGFHRLAVVDPLFGMQPLRVRKYPYLWLCYNGEIYNHKALQERFEFEYQTNVDGEVILHLYDKGGIEQTISMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLAVCSEAKGLISLKHSSAPFLKVEPFLPGHYEVLDLKPNGKVASVEMVKYHHCTDEPLHALYDSVEKLFPGFELETVKSNLRILFDNAIRKRLMTDRRIGCLLSGGLDSSLVAASLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVANYIGSEHHEVLFNSEEGIQALDEVIFSLETYDITTVRASVGMYLISKYIRKNTDSVVIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRIPKNGIEKHLLRETFEDSNLLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDAMMATAAQRFPFNTPQTKEGYYYRQIFERHYPGRADWLTHYWMPKWINATDPSARTLSHYKSVAEA
SIO_010081: Asns
subclass of: SO_0000673
so part of: Asns
location: complement(join(4056562..4056771,4057153..4057308,4057399..4057480,4058324..4058424,4059257..4059363,4062230..4062356,4063677..4063804,4064159..4064260,4064453..4064638,4068047..4068284,4071438..4071686))
location: region:4056562-4071686:-1
so has part: feature:4071438-4071686:-1:exon
so has part: feature:4068047-4068284:-1:exon
so has part: feature:4064453-4064638:-1:exon
so has part: feature:4064159-4064260:-1:exon
so has part: feature:4063677-4063804:-1:exon
so has part: feature:4062230-4062356:-1:exon
so has part: feature:4059257-4059363:-1:exon
so has part: feature:4058324-4058424:-1:exon
so has part: feature:4057399-4057480:-1:exon
so has part: feature:4057153-4057308:-1:exon
so has part: feature:4056562-4056771:-1:exon

XP_005363768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4071438-4071686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4068047-4068284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4064453-4064638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4064159-4064260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4063677-4063804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4062230-4062356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4059257-4059363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4058324-4058424:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4057399-4057480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4057153-4057308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4056562-4056771:-1:exon

C1galt1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: C1galt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4208293..4237958
location: region:4208293-4237958:1
so has part: feature:4208293-4237958:1:exon
subclass of: SO_0000010

101980374
type: Gene
SIO_000068: ncbigene

position:4208293:1
position: 4208293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4237958:1
position: 4237958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4208293-4237958:1:exon

C1galt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: C1galt1
product: core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005363712.3
SIO_010081: C1galt1
subclass of: SO_0000673
so part of: C1galt1
location: join(4208293..4208310,4230369..4230605,4233547..4234214,4237198..4237958)
location: region:4208293-4237958:1
so has part: feature:4208293-4208310:1:exon
so has part: feature:4230369-4230605:1:exon
so has part: feature:4233547-4234214:1:exon
so has part: feature:4237198-4237958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4208293-4208310:1:exon

position:4208310:1
position: 4208310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4230369-4230605:1:exon

position:4230369:1
position: 4230369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4230605:1
position: 4230605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4233547-4234214:1:exon

position:4233547:1
position: 4233547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4234214:1
position: 4234214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4237198-4237958:1:exon

position:4237198:1
position: 4237198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1galt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: C1galt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
translation: MASKSWLNFLIFLCGSAIGFFLCSQLFSILLGEEGDTQPSMLHNDPHAGHLDDNGHSHLKGQVDFNADSSQHKDENTDIAENLYQKVKILCWVMTSPQNLEKKAKHVKATWAQRCNKVLFMSSEENQDFPTVGLKTKEGREQLYWKTIKAFQYVYDHYLEDADWFMKADDDTYVILDNLRWLLSKYNPEQPIYFGRRFKPYVKQGYMSGGAGYVLSKEALRRFVDAFKTEKCTHSSSIEDLALGRCMEIINVEAGDSRDTTGKETFHPFVPEHHLIKGYLPKTFWYWNYNYYPPVEGPGCCSDIAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPALPEDILKEINQANKNEDTKVKLSNLERRP
SIO_010081: C1galt1
subclass of: SO_0000673
so part of: C1galt1
location: join(4230386..4230605,4233547..4234214,4237198..4237413)
location: region:4230386-4237413:1
so has part: feature:4230386-4230605:1:exon
so has part: feature:4233547-4234214:1:exon
so has part: feature:4237198-4237413:1:exon

XP_005363769.1
type: Protein
SIO_000068: ncbiprotein

position:4230386:1
position: 4230386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4237413:1
position: 4237413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230386-4230605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4233547-4234214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237198-4237413:1:exon

LOC113457938
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457938
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4323648..4323754)
location: region:4323648-4323754:-1
so has part: feature:4323648-4323754:-1:exon
subclass of: SO_0000623

113457938
type: Gene
SIO_000068: ncbigene

position:4323648:-1
position: 4323648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4323754:-1
position: 4323754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4323648-4323754:-1:exon

LOC113457938
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457938
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378406.1
SIO_010081: LOC113457938
subclass of: SO_0000673
so part of: LOC113457938
location: complement(4323648..4323754)
location: region:4323648-4323754:-1
so has part: feature:4323648-4323754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4323648-4323754:-1:exon

Col28a1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Col28a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4353025..4513109)
location: region:4353025-4513109:-1
so has part: feature:4353025-4513109:-1:exon
subclass of: SO_0000010

101980656
type: Gene
SIO_000068: ncbigene

position:4353025:-1
position: 4353025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4513109:-1
position: 4513109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4353025-4513109:-1:exon

Col28a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Col28a1
product: collagen type XXVIII alpha 1 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005363713.3
SIO_010081: Col28a1
subclass of: SO_0000673
so part of: Col28a1
location: complement(join(4353025..4354083,4355482..4355665,4369811..4369971,4371057..4371605,4374367..4374403,4376601..4376636,4376738..4376818,4377287..4377355,4410663..4410731,4412760..4412828,4424252..4424320,4424728..4424796,4429484..4429552,4430095..4430163,4433963..4434034,4436414..4436482,4437159..4437230,4443186..4443254,4444367..4444435,4447535..4447603,4452953..4453021,4455164..4455232,4465654..4465722,4466657..4466725,4482838..4482891,4484490..4484534,4486687..4486731,4493891..4493917,4496354..4496395,4498051..4498104,4500211..4500267,4501381..4501401,4507676..4508232,4508988..4509148,4512981..4513109))
location: region:4353025-4513109:-1
so has part: feature:4512981-4513109:-1:exon
so has part: feature:4508988-4509148:-1:exon
so has part: feature:4507676-4508232:-1:exon
so has part: feature:4501381-4501401:-1:exon
so has part: feature:4500211-4500267:-1:exon
so has part: feature:4498051-4498104:-1:exon
so has part: feature:4496354-4496395:-1:exon
so has part: feature:4493891-4493917:-1:exon
so has part: feature:4486687-4486731:-1:exon
so has part: feature:4484490-4484534:-1:exon
so has part: feature:4482838-4482891:-1:exon
so has part: feature:4466657-4466725:-1:exon
so has part: feature:4465654-4465722:-1:exon
so has part: feature:4455164-4455232:-1:exon
so has part: feature:4452953-4453021:-1:exon
so has part: feature:4447535-4447603:-1:exon
so has part: feature:4444367-4444435:-1:exon
so has part: feature:4443186-4443254:-1:exon
so has part: feature:4437159-4437230:-1:exon
so has part: feature:4436414-4436482:-1:exon
so has part: feature:4433963-4434034:-1:exon
so has part: feature:4430095-4430163:-1:exon
so has part: feature:4429484-4429552:-1:exon
so has part: feature:4424728-4424796:-1:exon
so has part: feature:4424252-4424320:-1:exon
so has part: feature:4412760-4412828:-1:exon
so has part: feature:4410663-4410731:-1:exon
so has part: feature:4377287-4377355:-1:exon
so has part: feature:4376738-4376818:-1:exon
so has part: feature:4376601-4376636:-1:exon
so has part: feature:4374367-4374403:-1:exon
so has part: feature:4371057-4371605:-1:exon
so has part: feature:4369811-4369971:-1:exon
so has part: feature:4355482-4355665:-1:exon
so has part: feature:4353025-4354083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4512981-4513109:-1:exon

position:4512981:-1
position: 4512981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4508988-4509148:-1:exon

position:4508988:-1
position: 4508988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509148:-1
position: 4509148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4507676-4508232:-1:exon

position:4507676:-1
position: 4507676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4508232:-1
position: 4508232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4501381-4501401:-1:exon

position:4501381:-1
position: 4501381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4501401:-1
position: 4501401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4500211-4500267:-1:exon

position:4500211:-1
position: 4500211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4500267:-1
position: 4500267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4498051-4498104:-1:exon

position:4498051:-1
position: 4498051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4498104:-1
position: 4498104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4496354-4496395:-1:exon

position:4496354:-1
position: 4496354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4496395:-1
position: 4496395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4493891-4493917:-1:exon

position:4493891:-1
position: 4493891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4493917:-1
position: 4493917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4486687-4486731:-1:exon

position:4486687:-1
position: 4486687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4486731:-1
position: 4486731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4484490-4484534:-1:exon

position:4484490:-1
position: 4484490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4484534:-1
position: 4484534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4482838-4482891:-1:exon

position:4482838:-1
position: 4482838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4482891:-1
position: 4482891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4466657-4466725:-1:exon

position:4466657:-1
position: 4466657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4466725:-1
position: 4466725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4465654-4465722:-1:exon

position:4465654:-1
position: 4465654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4465722:-1
position: 4465722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4455164-4455232:-1:exon

position:4455164:-1
position: 4455164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4455232:-1
position: 4455232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4452953-4453021:-1:exon

position:4452953:-1
position: 4452953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4453021:-1
position: 4453021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4447535-4447603:-1:exon

position:4447535:-1
position: 4447535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4447603:-1
position: 4447603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4444367-4444435:-1:exon

position:4444367:-1
position: 4444367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4444435:-1
position: 4444435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4443186-4443254:-1:exon

position:4443186:-1
position: 4443186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4443254:-1
position: 4443254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4437159-4437230:-1:exon

position:4437159:-1
position: 4437159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4437230:-1
position: 4437230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4436414-4436482:-1:exon

position:4436414:-1
position: 4436414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4436482:-1
position: 4436482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4433963-4434034:-1:exon

position:4433963:-1
position: 4433963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4434034:-1
position: 4434034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4430095-4430163:-1:exon

position:4430095:-1
position: 4430095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4430163:-1
position: 4430163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4429484-4429552:-1:exon

position:4429484:-1
position: 4429484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4429552:-1
position: 4429552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4424728-4424796:-1:exon

position:4424728:-1
position: 4424728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4424796:-1
position: 4424796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4424252-4424320:-1:exon

position:4424252:-1
position: 4424252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4424320:-1
position: 4424320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4412760-4412828:-1:exon

position:4412760:-1
position: 4412760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4412828:-1
position: 4412828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4410663-4410731:-1:exon

position:4410663:-1
position: 4410663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4410731:-1
position: 4410731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4377287-4377355:-1:exon

position:4377287:-1
position: 4377287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4377355:-1
position: 4377355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4376738-4376818:-1:exon

position:4376738:-1
position: 4376738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376818:-1
position: 4376818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4376601-4376636:-1:exon

position:4376601:-1
position: 4376601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376636:-1
position: 4376636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4374367-4374403:-1:exon

position:4374367:-1
position: 4374367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4374403:-1
position: 4374403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4371057-4371605:-1:exon

position:4371057:-1
position: 4371057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371605:-1
position: 4371605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4369811-4369971:-1:exon

position:4369811:-1
position: 4369811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4369971:-1
position: 4369971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4355482-4355665:-1:exon

position:4355482:-1
position: 4355482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4355665:-1
position: 4355665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4353025-4354083:-1:exon

position:4354083:-1
position: 4354083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Col28a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Col28a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVIII) chain
translation: MRKRDAAFCLLLLPVFMTQAVYGQRKKGPKPNTLARKNDFRDTVCFIDVVFILDSSESSKIVLFDNQKAFVDSLSERLFQLTPGRSLKYDIKLAALQFSSSIQIDPPLSSWKDLRTFKQRVKSLSLIGQGTFSYYAISNATKLLKREGRKDGVKVALLMTDGIDHPKSPDVQSISEDARISGISFITVGLSTVVNEAKLRLISGDASSEPVLLLSDPTLVDKIQERLDVLFERKCEPKICGCEKGDPGDPGPPGTHGNPGIKGERGPKGNPGDAQKGETGERGPGGIPGYKGDKGERGECGKPGMKGDKGLPGPYGPKGPRGIQGIGGPPGDPGPKGFQGNKGEPGPPGPYGPPGAPGIGQQGVKGERGQEGRTGAPGPIGVGEPGQPGPRGPEGTPGERGPPGEGFPGPKGEKGSEGPIGPQGLQGLSIKGDKGDLGPVGPQGPMGVPGIGSQGEQGIQGPIGPPGPQGPPGQGSPGSKGEIGQMGPTGPRGPMGVGVQGPKGEPGAVGLPGQPGVPGEDGASGKKGEAGLPGTRGPEGIPGKGQPGPKGDEGKKGSKGNPGQRGFPGPEGPKGEPGIMGPFGMPGISVPGPAGPKGDRGGPGMPGLKGEPGLSVRGPKGAQGPRGPVGAPGLKGDGYPGVAGPRGKPGPPGPMGLRGVGDTGAKGEQGVRGPPGPSGPRGIGTQGPKGDTGQKGLPGPPGPPGHGSQGIKGEQGPQGFPGPKGTVGHGLPGQKGDHGERGDVGKKGEKGEIGEPGSPGKQGLQGPKGDLGLTKEEIIKLIIEICGCGPKCEETPLELVFVIDSSESVGPENFQIIQNFVKTLADRVALDLATARIGIINYSHKVERVAGLKQFSSKDDFKLEVDSMQYLGEGTYTASALQTANDMFKEARPGVKKVALVITDGQTDSRDKKKLAEVVKDAKDSDVEIFVIGVVKKDDPNFEIFHQEMNLIATDAEHVYQFDDFFTLQDTLKQKLSKKICEDFDSYLIQVFGSSSSLQSGFGSSGQELDTSTPKPTQEAPELFNVSRGQNEEIEPSALTVAGNLAVPTPPPETTTFEPLFSGPEGTEIRNPNLILQSEKSLYKDPRCGEALKPGNCGDYVVRWYYDKQVNSCARFWFSGCNGSGNRFHSEKECQETCIK
SIO_010081: Col28a1
subclass of: SO_0000673
so part of: Col28a1
location: complement(join(4353914..4354083,4355482..4355665,4369811..4369971,4371057..4371605,4374367..4374403,4376601..4376636,4376738..4376818,4377287..4377355,4410663..4410731,4412760..4412828,4424252..4424320,4424728..4424796,4429484..4429552,4430095..4430163,4433963..4434034,4436414..4436482,4437159..4437230,4443186..4443254,4444367..4444435,4447535..4447603,4452953..4453021,4455164..4455232,4465654..4465722,4466657..4466725,4482838..4482891,4484490..4484534,4486687..4486731,4493891..4493917,4496354..4496395,4498051..4498104,4500211..4500267,4501381..4501401,4507676..4508232,4508988..4509111))
location: region:4353914-4509111:-1
so has part: feature:4508988-4509111:-1:exon
so has part: feature:4507676-4508232:-1:exon
so has part: feature:4501381-4501401:-1:exon
so has part: feature:4500211-4500267:-1:exon
so has part: feature:4498051-4498104:-1:exon
so has part: feature:4496354-4496395:-1:exon
so has part: feature:4493891-4493917:-1:exon
so has part: feature:4486687-4486731:-1:exon
so has part: feature:4484490-4484534:-1:exon
so has part: feature:4482838-4482891:-1:exon
so has part: feature:4466657-4466725:-1:exon
so has part: feature:4465654-4465722:-1:exon
so has part: feature:4455164-4455232:-1:exon
so has part: feature:4452953-4453021:-1:exon
so has part: feature:4447535-4447603:-1:exon
so has part: feature:4444367-4444435:-1:exon
so has part: feature:4443186-4443254:-1:exon
so has part: feature:4437159-4437230:-1:exon
so has part: feature:4436414-4436482:-1:exon
so has part: feature:4433963-4434034:-1:exon
so has part: feature:4430095-4430163:-1:exon
so has part: feature:4429484-4429552:-1:exon
so has part: feature:4424728-4424796:-1:exon
so has part: feature:4424252-4424320:-1:exon
so has part: feature:4412760-4412828:-1:exon
so has part: feature:4410663-4410731:-1:exon
so has part: feature:4377287-4377355:-1:exon
so has part: feature:4376738-4376818:-1:exon
so has part: feature:4376601-4376636:-1:exon
so has part: feature:4374367-4374403:-1:exon
so has part: feature:4371057-4371605:-1:exon
so has part: feature:4369811-4369971:-1:exon
so has part: feature:4355482-4355665:-1:exon
so has part: feature:4353914-4354083:-1:exon

XP_005363770.1
type: Protein
SIO_000068: ncbiprotein

position:4353914:-1
position: 4353914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509111:-1
position: 4509111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4508988-4509111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4507676-4508232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4501381-4501401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4500211-4500267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4498051-4498104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4496354-4496395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4493891-4493917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4486687-4486731:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4484490-4484534:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4482838-4482891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4466657-4466725:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4465654-4465722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4455164-4455232:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4452953-4453021:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4447535-4447603:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4444367-4444435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4443186-4443254:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4437159-4437230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4436414-4436482:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4433963-4434034:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4430095-4430163:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4429484-4429552:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4424728-4424796:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4424252-4424320:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4412760-4412828:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4410663-4410731:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4377287-4377355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4376738-4376818:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4376601-4376636:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4374367-4374403:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4371057-4371605:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4369811-4369971:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4355482-4355665:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4353914-4354083:-1:exon

Trnak-cuu
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Trnak-cuu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4393423..4393495)
location: region:4393423-4393495:-1
so has part: feature:4393423-4393495:-1:exon
subclass of: SO_0000663

113457939
type: Gene
SIO_000068: ncbigene

position:4393423:-1
position: 4393423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4393495:-1
position: 4393495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4393423-4393495:-1:exon

Trnak-cuu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 79684
gene: Trnak-cuu
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4393460..4393462),aa:Lys, seq:ctt)
SIO_010081: Trnak-cuu
subclass of: SO_0000673
so part of: Trnak-cuu
location: complement(4393423..4393495)
location: region:4393423-4393495:-1
so has part: feature:4393423-4393495:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4393423-4393495:-1:exon

Mios
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mios
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4537336..4573094
location: region:4537336-4573094:1
so has part: feature:4537336-4573094:1:exon
subclass of: SO_0000010

101980932
type: Gene
SIO_000068: ncbigene

position:4537336:1
position: 4537336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4573094:1
position: 4573094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4537336-4573094:1:exon

Mios
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mios
product: meiosis regulator for oocyte development, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_013352457.2
SIO_010081: Mios
subclass of: SO_0000673
so part of: Mios
location: join(4537336..4537406,4539723..4539790,4544330..4545663,4545937..4546035,4552194..4552448,4556316..4556485,4557539..4557604,4559003..4559161,4563047..4563199,4564839..4565043,4569097..4569226,4570717..4573094)
location: region:4537336-4573094:1
so has part: feature:4537336-4537406:1:exon
so has part: feature:4539723-4539790:1:exon
so has part: feature:4544330-4545663:1:exon
so has part: feature:4545937-4546035:1:exon
so has part: feature:4552194-4552448:1:exon
so has part: feature:4556316-4556485:1:exon
so has part: feature:4557539-4557604:1:exon
so has part: feature:4559003-4559161:1:exon
so has part: feature:4563047-4563199:1:exon
so has part: feature:4564839-4565043:1:exon
so has part: feature:4569097-4569226:1:exon
so has part: feature:4570717-4573094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4537336-4537406:1:exon

position:4537406:1
position: 4537406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4539723-4539790:1:exon

position:4539723:1
position: 4539723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539790:1
position: 4539790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4544330-4545663:1:exon

position:4544330:1
position: 4544330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4545663:1
position: 4545663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4545937-4546035:1:exon

position:4545937:1
position: 4545937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4546035:1
position: 4546035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4552194-4552448:1:exon

position:4552194:1
position: 4552194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4552448:1
position: 4552448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4556316-4556485:1:exon

position:4556316:1
position: 4556316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4556485:1
position: 4556485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4557539-4557604:1:exon

position:4557539:1
position: 4557539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4557604:1
position: 4557604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4559003-4559161:1:exon

position:4559003:1
position: 4559003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4559161:1
position: 4559161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4563047-4563199:1:exon

position:4563047:1
position: 4563047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4563199:1
position: 4563199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4564839-4565043:1:exon

position:4564839:1
position: 4564839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4565043:1
position: 4565043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4569097-4569226:1:exon

position:4569097:1
position: 4569097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4569226:1
position: 4569226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4570717-4573094:1:exon

position:4570717:1
position: 4570717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mios
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Mios
product: meiosis regulator for oocyte development, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003378394.1
SIO_010081: Mios
so part of: Mios
location: join(4537336..4537406,4539723..4539790,4544330..4545663,4545937..4546035,4552194..4552448,4556316..4556485,4557539..4557604,4559003..4559161,4563047..4563199,4564839..4565043,4569097..4569226,4570717..4571703,4572467..4573094)
location: region:4537336-4573094:1
so has part: feature:4537336-4537406:1:exon
so has part: feature:4539723-4539790:1:exon
so has part: feature:4544330-4545663:1:exon
so has part: feature:4545937-4546035:1:exon
so has part: feature:4552194-4552448:1:exon
so has part: feature:4556316-4556485:1:exon
so has part: feature:4557539-4557604:1:exon
so has part: feature:4559003-4559161:1:exon
so has part: feature:4563047-4563199:1:exon
so has part: feature:4564839-4565043:1:exon
so has part: feature:4569097-4569226:1:exon
so has part: feature:4570717-4571703:1:exon
so has part: feature:4572467-4573094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4537336-4537406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4539723-4539790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4544330-4545663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545937-4546035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4552194-4552448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4556316-4556485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4557539-4557604:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4559003-4559161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4563047-4563199:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4564839-4565043:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4569097-4569226:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4570717-4571703:1:exon

position:4571703:1
position: 4571703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4572467-4573094:1:exon

position:4572467:1
position: 4572467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mios
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mios
product: meiosis regulator for oocyte development, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005363714.3
SIO_010081: Mios
subclass of: SO_0000673
so part of: Mios
location: join(4537453..4537972,4539723..4539790,4544330..4545663,4545937..4546035,4552194..4552448,4556316..4556485,4557539..4557604,4559003..4559161,4563047..4563199,4564839..4565043,4569097..4569226,4570717..4573094)
location: region:4537453-4573094:1
so has part: feature:4537453-4537972:1:exon
so has part: feature:4539723-4539790:1:exon
so has part: feature:4544330-4545663:1:exon
so has part: feature:4545937-4546035:1:exon
so has part: feature:4552194-4552448:1:exon
so has part: feature:4556316-4556485:1:exon
so has part: feature:4557539-4557604:1:exon
so has part: feature:4559003-4559161:1:exon
so has part: feature:4563047-4563199:1:exon
so has part: feature:4564839-4565043:1:exon
so has part: feature:4569097-4569226:1:exon
so has part: feature:4570717-4573094:1:exon

position:4537453:1
position: 4537453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4537453-4537972:1:exon

position:4537972:1
position: 4537972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4539723-4539790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4544330-4545663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545937-4546035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4552194-4552448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4556316-4556485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4557539-4557604:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4559003-4559161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4563047-4563199:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4564839-4565043:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4569097-4569226:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4570717-4573094:1:exon

Mios
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mios
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GATOR complex protein MIOS
translation: MSGTKPDILWAPHQVDRFVVCDSELSLYHVESAVNSELKAGSLRLSEDSAATLLSINSDTPYMKCVAWYLNYDPECLLAVGQANGRVVLTSLGQDHNSKFKDLIGKEFVPKHARQCNTLAWNPLDSNWLAAGLDKHRADFSVLIWDICSKYTPDIVPMEKVRLSAGEAETTLLVTKPLYELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKMFVNTKAVQGVTVDPYFHDRVASFYEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRTGLLATLTRDSNIIRLYDMQHTPTPIGDETEPTIIERSVQPCDNYIASFAWHPTSQNRMIVVTPNRTMSDFTVFERISLAWSPITSLMWACGRHLYECAEEESDNSLEKDIATKMRLRALSRYGLDTEQVWRNHILAGNEDPQLKSLWYTLHFMKQYTEDMDQKSPGNKGSLVYAGIKSIVKSSLGMVESTRHNWSGLDKQTDIQNLNEERILALQLCGWVKKGTDVDVGPFLNSLVQEGEWERAAAVALFNLDIRRAIQILNEGASSEKGDLNLNVVAMALSGYTDEKNSLWREMCSTLRLQLNNPYLCVMFAFLTSEAGAYDGVLYENKVAVRDRVAFACKFLGDTQLNKYIEKLTNEMKEAGNLEGILLTGLTKDGVDLMESYVDRTGDVQTASYCMLQGSPLDVLKDERVQYWIENYRNLLDAWRFWHKRAEFDIHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSSVPHQGRGFSQYGVSGSPTKSKVTSCPGCRKPLPRCALCLINMGTPVSSCPGGSKSDEKVDLSKDKKLAQFNNWFTWCHNCRHGGHAGHMLSWFRDHAECPVSACTCKCMQLDTTGNLVPAETVQP
SIO_010081: Mios
subclass of: SO_0000673
so part of: Mios
location: join(4544370..4545663,4545937..4546035,4552194..4552448,4556316..4556485,4557539..4557604,4559003..4559161,4563047..4563199,4564839..4565043,4569097..4569226,4570717..4570813)
location: region:4544370-4570813:1
so has part: feature:4544370-4545663:1:exon
so has part: feature:4545937-4546035:1:exon
so has part: feature:4552194-4552448:1:exon
so has part: feature:4556316-4556485:1:exon
so has part: feature:4557539-4557604:1:exon
so has part: feature:4559003-4559161:1:exon
so has part: feature:4563047-4563199:1:exon
so has part: feature:4564839-4565043:1:exon
so has part: feature:4569097-4569226:1:exon
so has part: feature:4570717-4570813:1:exon

XP_005363771.1
type: Protein
SIO_000068: ncbiprotein

position:4544370:1
position: 4544370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4570813:1
position: 4570813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4544370-4545663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4545937-4546035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4552194-4552448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4556316-4556485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4557539-4557604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4559003-4559161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4563047-4563199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4564839-4565043:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4569097-4569226:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4570717-4570813:1:exon

Mios
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mios
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GATOR complex protein MIOS
translation: MSGTKPDILWAPHQVDRFVVCDSELSLYHVESAVNSELKAGSLRLSEDSAATLLSINSDTPYMKCVAWYLNYDPECLLAVGQANGRVVLTSLGQDHNSKFKDLIGKEFVPKHARQCNTLAWNPLDSNWLAAGLDKHRADFSVLIWDICSKYTPDIVPMEKVRLSAGEAETTLLVTKPLYELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKMFVNTKAVQGVTVDPYFHDRVASFYEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRTGLLATLTRDSNIIRLYDMQHTPTPIGDETEPTIIERSVQPCDNYIASFAWHPTSQNRMIVVTPNRTMSDFTVFERISLAWSPITSLMWACGRHLYECAEEESDNSLEKDIATKMRLRALSRYGLDTEQVWRNHILAGNEDPQLKSLWYTLHFMKQYTEDMDQKSPGNKGSLVYAGIKSIVKSSLGMVESTRHNWSGLDKQTDIQNLNEERILALQLCGWVKKGTDVDVGPFLNSLVQEGEWERAAAVALFNLDIRRAIQILNEGASSEKGDLNLNVVAMALSGYTDEKNSLWREMCSTLRLQLNNPYLCVMFAFLTSEAGAYDGVLYENKVAVRDRVAFACKFLGDTQLNKYIEKLTNEMKEAGNLEGILLTGLTKDGVDLMESYVDRTGDVQTASYCMLQGSPLDVLKDERVQYWIENYRNLLDAWRFWHKRAEFDIHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSSVPHQGRGFSQYGVSGSPTKSKVTSCPGCRKPLPRCALCLINMGTPVSSCPGGSKSDEKVDLSKDKKLAQFNNWFTWCHNCRHGGHAGHMLSWFRDHAECPVSACTCKCMQLDTTGNLVPAETVQP
SIO_010081: Mios
subclass of: SO_0000673
so part of: Mios
location: join(4544370..4545663,4545937..4546035,4552194..4552448,4556316..4556485,4557539..4557604,4559003..4559161,4563047..4563199,4564839..4565043,4569097..4569226,4570717..4570813)
location: region:4544370-4570813:1
so has part: feature:4544370-4545663:1:exon
so has part: feature:4545937-4546035:1:exon
so has part: feature:4552194-4552448:1:exon
so has part: feature:4556316-4556485:1:exon
so has part: feature:4557539-4557604:1:exon
so has part: feature:4559003-4559161:1:exon
so has part: feature:4563047-4563199:1:exon
so has part: feature:4564839-4565043:1:exon
so has part: feature:4569097-4569226:1:exon
so has part: feature:4570717-4570813:1:exon

XP_013207911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4544370-4545663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4545937-4546035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4552194-4552448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4556316-4556485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4557539-4557604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4559003-4559161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4563047-4563199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4564839-4565043:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4569097-4569226:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4570717-4570813:1:exon

Rpa3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rpa3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4584078..4593676)
location: region:4584078-4593676:-1
so has part: feature:4584078-4593676:-1:exon
subclass of: SO_0000010

101981225
type: Gene
SIO_000068: ncbigene

position:4584078:-1
position: 4584078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4593676:-1
position: 4593676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4584078-4593676:-1:exon

Rpa3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rpa3
product: replication protein A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_013352430.2
SIO_010081: Rpa3
subclass of: SO_0000673
so part of: Rpa3
location: complement(join(4584078..4588723,4591322..4591430,4592450..4592524,4593488..4593676))
location: region:4584078-4593676:-1
so has part: feature:4593488-4593676:-1:exon
so has part: feature:4592450-4592524:-1:exon
so has part: feature:4591322-4591430:-1:exon
so has part: feature:4584078-4588723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4593488-4593676:-1:exon

position:4593488:-1
position: 4593488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4592450-4592524:-1:exon

position:4592450:-1
position: 4592450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4592524:-1
position: 4592524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4591322-4591430:-1:exon

position:4591322:-1
position: 4591322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4591430:-1
position: 4591430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4584078-4588723:-1:exon

position:4588723:-1
position: 4588723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rpa3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rpa3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication protein A 14 kDa subunit isoform X2
translation: MVDILELPRARVNASMLTQFIDRPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGVVEVVGKVTAKATIMCASYIQFKEDCARFGMEDSTNI
SIO_010081: Rpa3
subclass of: SO_0000673
so part of: Rpa3
location: complement(join(4588698..4588723,4591322..4591430,4592450..4592524,4593488..4593586))
location: region:4588698-4593586:-1
so has part: feature:4593488-4593586:-1:exon
so has part: feature:4592450-4592524:-1:exon
so has part: feature:4591322-4591430:-1:exon
so has part: feature:4588698-4588723:-1:exon

XP_013207884.1
type: Protein
SIO_000068: ncbiprotein

position:4588698:-1
position: 4588698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4593586:-1
position: 4593586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4593488-4593586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592450-4592524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4591322-4591430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4588698-4588723:-1:exon

Rpa3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rpa3
product: replication protein A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_005363715.3
SIO_010081: Rpa3
subclass of: SO_0000673
so part of: Rpa3
location: complement(join(4590129..4590479,4591322..4591430,4592450..4592524,4593488..4593676))
location: region:4590129-4593676:-1
so has part: feature:4593488-4593676:-1:exon
so has part: feature:4592450-4592524:-1:exon
so has part: feature:4591322-4591430:-1:exon
so has part: feature:4590129-4590479:-1:exon

position:4590129:-1
position: 4590129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4593488-4593676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592450-4592524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4591322-4591430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4590129-4590479:-1:exon

position:4590479:-1
position: 4590479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rpa3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rpa3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication protein A 14 kDa subunit isoform X1
translation: MVDILELPRARVNASMLTQFIDRPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGVVEVVGKVTAKATIMCASYIQFKEDCARFDLELYNEAVKIINELPQFFPI
SIO_010081: Rpa3
subclass of: SO_0000673
so part of: Rpa3
location: complement(join(4590415..4590479,4591322..4591430,4592450..4592524,4593488..4593586))
location: region:4590415-4593586:-1
so has part: feature:4593488-4593586:-1:exon
so has part: feature:4592450-4592524:-1:exon
so has part: feature:4591322-4591430:-1:exon
so has part: feature:4590415-4590479:-1:exon

XP_005363772.1
type: Protein
SIO_000068: ncbiprotein

position:4590415:-1
position: 4590415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4593488-4593586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592450-4592524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4591322-4591430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4590415-4590479:-1:exon

Umad1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Umad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4593736..4754614
location: region:4593736-4754614:1
so has part: feature:4593736-4754614:1:exon
subclass of: SO_0000010

106144248
type: Gene
SIO_000068: ncbigene

position:4593736:1
position: 4593736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4754614:1
position: 4754614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4593736-4754614:1:exon

Umad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Umad1
product: UBAP1-MVB12-associated (UMA) domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026787555.1
SIO_010081: Umad1
subclass of: SO_0000673
so part of: Umad1
location: join(4593736..4593987,4599785..4599816,4611196..4611295,4706417..4706478,4753336..4754614)
location: region:4593736-4754614:1
so has part: feature:4593736-4593987:1:exon
so has part: feature:4599785-4599816:1:exon
so has part: feature:4611196-4611295:1:exon
so has part: feature:4706417-4706478:1:exon
so has part: feature:4753336-4754614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4593736-4593987:1:exon

position:4593987:1
position: 4593987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4599785-4599816:1:exon

position:4599785:1
position: 4599785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4599816:1
position: 4599816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4611196-4611295:1:exon

position:4611196:1
position: 4611196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4611295:1
position: 4611295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4706417-4706478:1:exon

position:4706417:1
position: 4706417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4706478:1
position: 4706478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4753336-4754614:1:exon

position:4753336:1
position: 4753336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Umad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Umad1
product: UBAP1-MVB12-associated (UMA) domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_013352454.2
SIO_010081: Umad1
subclass of: SO_0000673
so part of: Umad1
location: join(4593737..4593987,4611196..4611295,4706417..4706478,4753336..4754614)
location: region:4593737-4754614:1
so has part: feature:4593737-4593987:1:exon
so has part: feature:4611196-4611295:1:exon
so has part: feature:4706417-4706478:1:exon
so has part: feature:4753336-4754614:1:exon

position:4593737:1
position: 4593737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4593737-4593987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4611196-4611295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4706417-4706478:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4753336-4754614:1:exon

Umad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Umad1
product: UBAP1-MVB12-associated (UMA) domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_026787556.1
SIO_010081: Umad1
subclass of: SO_0000673
so part of: Umad1
location: join(4594000..4594138,4611196..4611295,4706417..4706478,4753336..4754614)
location: region:4594000-4754614:1
so has part: feature:4594000-4594138:1:exon
so has part: feature:4611196-4611295:1:exon
so has part: feature:4706417-4706478:1:exon
so has part: feature:4753336-4754614:1:exon

position:4594000:1
position: 4594000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4594000-4594138:1:exon

position:4594138:1
position: 4594138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4611196-4611295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4706417-4706478:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4753336-4754614:1:exon

Umad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Umad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBAP1-MVB12-associated (UMA)-domain containing protein 1 isoform X1
translation: MKIATVAAMFHFFRKPPESKKPSVSEPEADGFVLLGDTAKEMRCKPSEAESSQSLETGKADTSSVTVAGFKTEDQAGRTLESTSQTAELLSDVPFTLAPHVLAVQGTIGDLPDHLLSYDVGDNLSRFWYDFTLENSVLCDS
SIO_010081: Umad1
subclass of: SO_0000673
so part of: Umad1
location: join(4599811..4599816,4611196..4611295,4706417..4706478,4753336..4753593)
location: region:4599811-4753593:1
so has part: feature:4599811-4599816:1:exon
so has part: feature:4611196-4611295:1:exon
so has part: feature:4706417-4706478:1:exon
so has part: feature:4753336-4753593:1:exon

XP_026643356.1
type: Protein
SIO_000068: ncbiprotein

position:4599811:1
position: 4599811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4753593:1
position: 4753593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4599811-4599816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4611196-4611295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4706417-4706478:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4753336-4753593:1:exon

Umad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Umad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBAP1-MVB12-associated (UMA)-domain containing protein 1 isoform X2
translation: MFHFFRKPPESKKPSVSEPEADGFVLLGDTAKEMRCKPSEAESSQSLETGKADTSSVTVAGFKTEDQAGRTLESTSQTAELLSDVPFTLAPHVLAVQGTIGDLPDHLLSYDVGDNLSRFWYDFTLENSVLCDS
SIO_010081: Umad1
subclass of: SO_0000673
so part of: Umad1
location: join(4611214..4611295,4706417..4706478,4753336..4753593)
location: region:4611214-4753593:1
so has part: feature:4611214-4611295:1:exon
so has part: feature:4706417-4706478:1:exon
so has part: feature:4753336-4753593:1:exon

XP_026643357.1
type: Protein
SIO_000068: ncbiprotein

position:4611214:1
position: 4611214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4611214-4611295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4706417-4706478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4753336-4753593:1:exon

Umad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Umad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBAP1-MVB12-associated (UMA)-domain containing protein 1 isoform X2
translation: MFHFFRKPPESKKPSVSEPEADGFVLLGDTAKEMRCKPSEAESSQSLETGKADTSSVTVAGFKTEDQAGRTLESTSQTAELLSDVPFTLAPHVLAVQGTIGDLPDHLLSYDVGDNLSRFWYDFTLENSVLCDS
SIO_010081: Umad1
subclass of: SO_0000673
so part of: Umad1
location: join(4611214..4611295,4706417..4706478,4753336..4753593)
location: region:4611214-4753593:1
so has part: feature:4611214-4611295:1:exon
so has part: feature:4706417-4706478:1:exon
so has part: feature:4753336-4753593:1:exon

XP_013207908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4611214-4611295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4706417-4706478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4753336-4753593:1:exon

Glcci1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Glcci1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4829659..4913190
location: region:4829659-4913190:1
so has part: feature:4829659-4913190:1:exon
subclass of: SO_0000010

101981757
type: Gene
SIO_000068: ncbigene

position:4829659:1
position: 4829659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4913190:1
position: 4913190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4829659-4913190:1:exon

Glcci1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Glcci1
product: glucocorticoid induced 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_013352453.2
SIO_010081: Glcci1
subclass of: SO_0000673
so part of: Glcci1
location: join(4829659..4829726,4870576..4870727,4881359..4881445,4890104..4890220,4894098..4894250,4897185..4897395,4908660..4908780,4910374..4913190)
location: region:4829659-4913190:1
so has part: feature:4829659-4829726:1:exon
so has part: feature:4870576-4870727:1:exon
so has part: feature:4881359-4881445:1:exon
so has part: feature:4890104-4890220:1:exon
so has part: feature:4894098-4894250:1:exon
so has part: feature:4897185-4897395:1:exon
so has part: feature:4908660-4908780:1:exon
so has part: feature:4910374-4913190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4829659-4829726:1:exon

position:4829726:1
position: 4829726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4870576-4870727:1:exon

position:4870576:1
position: 4870576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4870727:1
position: 4870727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4881359-4881445:1:exon

position:4881359:1
position: 4881359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4881445:1
position: 4881445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4890104-4890220:1:exon

position:4890104:1
position: 4890104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4890220:1
position: 4890220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4894098-4894250:1:exon

position:4894098:1
position: 4894098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4894250:1
position: 4894250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4897185-4897395:1:exon

position:4897185:1
position: 4897185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4897395:1
position: 4897395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4908660-4908780:1:exon

position:4908660:1
position: 4908660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4908780:1
position: 4908780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4910374-4913190:1:exon

position:4910374:1
position: 4910374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Glcci1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Glcci1
product: glucocorticoid induced 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026787553.1
SIO_010081: Glcci1
subclass of: SO_0000673
so part of: Glcci1
location: join(4829663..4829726,4870576..4870727,4881359..4881445,4890107..4890220,4894098..4894250,4897185..4897395,4908660..4908780,4910374..4910728)
location: region:4829663-4910728:1
so has part: feature:4829663-4829726:1:exon
so has part: feature:4870576-4870727:1:exon
so has part: feature:4881359-4881445:1:exon
so has part: feature:4890107-4890220:1:exon
so has part: feature:4894098-4894250:1:exon
so has part: feature:4897185-4897395:1:exon
so has part: feature:4908660-4908780:1:exon
so has part: feature:4910374-4910728:1:exon

position:4829663:1
position: 4829663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4910728:1
position: 4910728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4829663-4829726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4870576-4870727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881359-4881445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4890107-4890220:1:exon

position:4890107:1
position: 4890107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4894098-4894250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4897185-4897395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4908660-4908780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4910374-4910728:1:exon

Glcci1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Glcci1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid-induced transcript 1 protein isoform X1
translation: MNGMKTAAFFQVDRPKSQQIRTSSTIRRTSSLDAITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEQIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHITISHTQAIGSRSVPMPLSNISVPKSSASRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKVNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDDTSTVDSLEPSVQQPSQQQQLLQDLQAEEHISTQNYVMI
SIO_010081: Glcci1
subclass of: SO_0000673
so part of: Glcci1
location: join(4829693..4829726,4870576..4870727,4881359..4881445,4890104..4890220,4894098..4894250,4897185..4897395,4908660..4908780,4910374..4910719)
location: region:4829693-4910719:1
so has part: feature:4829693-4829726:1:exon
so has part: feature:4870576-4870727:1:exon
so has part: feature:4881359-4881445:1:exon
so has part: feature:4890104-4890220:1:exon
so has part: feature:4894098-4894250:1:exon
so has part: feature:4897185-4897395:1:exon
so has part: feature:4908660-4908780:1:exon
so has part: feature:4910374-4910719:1:exon

XP_013207907.1
type: Protein
SIO_000068: ncbiprotein

position:4829693:1
position: 4829693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4910719:1
position: 4910719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4829693-4829726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4870576-4870727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881359-4881445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4890104-4890220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4894098-4894250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4897185-4897395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4908660-4908780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4910374-4910719:1:exon

Glcci1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Glcci1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid-induced transcript 1 protein isoform X2
translation: MNGMKTAAFFQVDRPKSQQIRTSSTIRRTSSLDAITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHITISHTQAIGSRSVPMPLSNISVPKSSASRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKVNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDDTSTVDSLEPSVQQPSQQQQLLQDLQAEEHISTQNYVMI
SIO_010081: Glcci1
subclass of: SO_0000673
so part of: Glcci1
location: join(4829693..4829726,4870576..4870727,4881359..4881445,4890107..4890220,4894098..4894250,4897185..4897395,4908660..4908780,4910374..4910719)
location: region:4829693-4910719:1
so has part: feature:4829693-4829726:1:exon
so has part: feature:4870576-4870727:1:exon
so has part: feature:4881359-4881445:1:exon
so has part: feature:4890107-4890220:1:exon
so has part: feature:4894098-4894250:1:exon
so has part: feature:4897185-4897395:1:exon
so has part: feature:4908660-4908780:1:exon
so has part: feature:4910374-4910719:1:exon

XP_026643354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4829693-4829726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4870576-4870727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881359-4881445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4890107-4890220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4894098-4894250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4897185-4897395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4908660-4908780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4910374-4910719:1:exon

Glcci1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Glcci1
product: glucocorticoid induced 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026787554.1
SIO_010081: Glcci1
subclass of: SO_0000673
so part of: Glcci1
location: join(4845139..4845188,4870576..4870727,4881359..4881445,4890104..4890220,4894098..4894250,4897185..4897395,4908660..4908780,4910374..4910728)
location: region:4845139-4910728:1
so has part: feature:4845139-4845188:1:exon
so has part: feature:4870576-4870727:1:exon
so has part: feature:4881359-4881445:1:exon
so has part: feature:4890104-4890220:1:exon
so has part: feature:4894098-4894250:1:exon
so has part: feature:4897185-4897395:1:exon
so has part: feature:4908660-4908780:1:exon
so has part: feature:4910374-4910728:1:exon

position:4845139:1
position: 4845139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4845139-4845188:1:exon

position:4845188:1
position: 4845188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4870576-4870727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881359-4881445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4890104-4890220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4894098-4894250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4897185-4897395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4908660-4908780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4910374-4910728:1:exon

Glcci1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Glcci1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid-induced transcript 1 protein isoform X3
translation: MKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEQIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHITISHTQAIGSRSVPMPLSNISVPKSSASRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKVNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDDTSTVDSLEPSVQQPSQQQQLLQDLQAEEHISTQNYVMI
SIO_010081: Glcci1
subclass of: SO_0000673
so part of: Glcci1
location: join(4870707..4870727,4881359..4881445,4890104..4890220,4894098..4894250,4897185..4897395,4908660..4908780,4910374..4910719)
location: region:4870707-4910719:1
so has part: feature:4870707-4870727:1:exon
so has part: feature:4881359-4881445:1:exon
so has part: feature:4890104-4890220:1:exon
so has part: feature:4894098-4894250:1:exon
so has part: feature:4897185-4897395:1:exon
so has part: feature:4908660-4908780:1:exon
so has part: feature:4910374-4910719:1:exon

XP_026643355.1
type: Protein
SIO_000068: ncbiprotein

position:4870707:1
position: 4870707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4870707-4870727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4881359-4881445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4890104-4890220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4894098-4894250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4897185-4897395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4908660-4908780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4910374-4910719:1:exon

Ica1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ica1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4932451..5077278)
location: region:4932451-5077278:-1
so has part: feature:4932451-5077278:-1:exon
subclass of: SO_0000010

101982042
type: Gene
SIO_000068: ncbigene

position:4932451:-1
position: 4932451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5077278:-1
position: 5077278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4932451-5077278:-1:exon

Ica1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ica1
product: islet cell autoantigen 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026787529.1
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932451..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057262,5077103..5077278))
location: region:4932451-5077278:-1
so has part: feature:5077103-5077278:-1:exon
so has part: feature:5057233-5057262:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932451-4932716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5077103-5077278:-1:exon

position:5077103:-1
position: 5077103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5057233-5057262:-1:exon

position:5057233:-1
position: 5057233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5057262:-1
position: 5057262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5054295-5054457:-1:exon

position:5054295:-1
position: 5054295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5054457:-1
position: 5054457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5048314-5048386:-1:exon

position:5048314:-1
position: 5048314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5048386:-1
position: 5048386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5041962-5042085:-1:exon

position:5041962:-1
position: 5041962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042085:-1
position: 5042085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5035061-5035259:-1:exon

position:5035061:-1
position: 5035061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5035259:-1
position: 5035259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4973557-4973682:-1:exon

position:4973557:-1
position: 4973557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4973682:-1
position: 4973682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4971911-4972009:-1:exon

position:4971911:-1
position: 4971911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4972009:-1
position: 4972009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4960136-4960233:-1:exon

position:4960136:-1
position: 4960136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4960233:-1
position: 4960233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4957985-4958037:-1:exon

position:4957985:-1
position: 4957985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4958037:-1
position: 4958037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4955313-4955375:-1:exon

position:4955313:-1
position: 4955313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4955375:-1
position: 4955375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4955178-4955216:-1:exon

position:4955178:-1
position: 4955178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4955216:-1
position: 4955216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4946627-4946896:-1:exon

position:4946627:-1
position: 4946627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4946896:-1
position: 4946896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4932451-4932716:-1:exon

position:4932716:-1
position: 4932716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ica1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ica1
product: islet cell autoantigen 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026787527.1
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932451..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057318,5077103..5077277))
location: region:4932451-5077277:-1
so has part: feature:5077103-5077277:-1:exon
so has part: feature:5057233-5057318:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932451-4932716:-1:exon

position:5077277:-1
position: 5077277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5077103-5077277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5057233-5057318:-1:exon

position:5057318:-1
position: 5057318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5054295-5054457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5048314-5048386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5041962-5042085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5035061-5035259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4973557-4973682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4971911-4972009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4960136-4960233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4957985-4958037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4955313-4955375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4955178-4955216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4946627-4946896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4932451-4932716:-1:exon

Ica1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ica1
product: islet cell autoantigen 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026787528.1
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932451..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057262,5076782..5076886))
location: region:4932451-5076886:-1
so has part: feature:5076782-5076886:-1:exon
so has part: feature:5057233-5057262:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932451-4932716:-1:exon

position:5076886:-1
position: 5076886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5076782-5076886:-1:exon

position:5076782:-1
position: 5076782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5057233-5057262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5054295-5054457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5048314-5048386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5041962-5042085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5035061-5035259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4973557-4973682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4971911-4972009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4960136-4960233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4957985-4958037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4955313-4955375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4955178-4955216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4946627-4946896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4932451-4932716:-1:exon

Ica1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ica1
product: islet cell autoantigen 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005363717.2
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932451..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057318,5076782..5076885))
location: region:4932451-5076885:-1
so has part: feature:5076782-5076885:-1:exon
so has part: feature:5057233-5057318:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932451-4932716:-1:exon

position:5076885:-1
position: 5076885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5076782-5076885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5057233-5057318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5054295-5054457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5048314-5048386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5041962-5042085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5035061-5035259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4973557-4973682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4971911-4972009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4960136-4960233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4957985-4958037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4955313-4955375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4955178-4955216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4946627-4946896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4932451-4932716:-1:exon

Ica1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ica1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: islet cell autoantigen 1
translation: MSGHKCYSWELQDRFSQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSVQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRIEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKQNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEGKKSTRRRESLEAATQEPKQLISLEDENQQKESSPCKAEEEKSTLSSIDKSPAHDTCSGPIDELLDMKPEEACLGPMAETPEPEGGDKDDLLLLNEIFSASSLDEGEFSREWAAVFGDDRLKEPAPVGAQGEPDPKPQISSGFLPSQLLDQNMKDLQASLQEPAKASSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932595..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057249))
location: region:4932595-5057249:-1
so has part: feature:5057233-5057249:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932595-4932716:-1:exon

XP_026643328.1
type: Protein
SIO_000068: ncbiprotein

position:4932595:-1
position: 4932595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5057249:-1
position: 5057249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5057233-5057249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5054295-5054457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5048314-5048386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5041962-5042085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5035061-5035259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4973557-4973682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971911-4972009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4960136-4960233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4957985-4958037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4955313-4955375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4955178-4955216:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4946627-4946896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4932595-4932716:-1:exon

Ica1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ica1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: islet cell autoantigen 1
translation: MSGHKCYSWELQDRFSQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSVQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRIEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKQNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEGKKSTRRRESLEAATQEPKQLISLEDENQQKESSPCKAEEEKSTLSSIDKSPAHDTCSGPIDELLDMKPEEACLGPMAETPEPEGGDKDDLLLLNEIFSASSLDEGEFSREWAAVFGDDRLKEPAPVGAQGEPDPKPQISSGFLPSQLLDQNMKDLQASLQEPAKASSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932595..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057249))
location: region:4932595-5057249:-1
so has part: feature:5057233-5057249:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932595-4932716:-1:exon

XP_026643329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5057233-5057249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5054295-5054457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5048314-5048386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5041962-5042085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5035061-5035259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4973557-4973682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971911-4972009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4960136-4960233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4957985-4958037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4955313-4955375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4955178-4955216:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4946627-4946896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4932595-4932716:-1:exon

Ica1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ica1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: islet cell autoantigen 1
translation: MSGHKCYSWELQDRFSQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSVQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRIEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKQNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEGKKSTRRRESLEAATQEPKQLISLEDENQQKESSPCKAEEEKSTLSSIDKSPAHDTCSGPIDELLDMKPEEACLGPMAETPEPEGGDKDDLLLLNEIFSASSLDEGEFSREWAAVFGDDRLKEPAPVGAQGEPDPKPQISSGFLPSQLLDQNMKDLQASLQEPAKASSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932595..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057249))
location: region:4932595-5057249:-1
so has part: feature:5057233-5057249:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932595-4932716:-1:exon

XP_026643330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5057233-5057249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5054295-5054457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5048314-5048386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5041962-5042085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5035061-5035259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4973557-4973682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971911-4972009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4960136-4960233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4957985-4958037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4955313-4955375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4955178-4955216:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4946627-4946896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4932595-4932716:-1:exon

Ica1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ica1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: islet cell autoantigen 1
translation: MSGHKCYSWELQDRFSQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSVQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRIEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKQNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEGKKSTRRRESLEAATQEPKQLISLEDENQQKESSPCKAEEEKSTLSSIDKSPAHDTCSGPIDELLDMKPEEACLGPMAETPEPEGGDKDDLLLLNEIFSASSLDEGEFSREWAAVFGDDRLKEPAPVGAQGEPDPKPQISSGFLPSQLLDQNMKDLQASLQEPAKASSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA
SIO_010081: Ica1
subclass of: SO_0000673
so part of: Ica1
location: complement(join(4932595..4932716,4946627..4946896,4955178..4955216,4955313..4955375,4957985..4958037,4960136..4960233,4971911..4972009,4973557..4973682,5035061..5035259,5041962..5042085,5048314..5048386,5054295..5054457,5057233..5057249))
location: region:4932595-5057249:-1
so has part: feature:5057233-5057249:-1:exon
so has part: feature:5054295-5054457:-1:exon
so has part: feature:5048314-5048386:-1:exon
so has part: feature:5041962-5042085:-1:exon
so has part: feature:5035061-5035259:-1:exon
so has part: feature:4973557-4973682:-1:exon
so has part: feature:4971911-4972009:-1:exon
so has part: feature:4960136-4960233:-1:exon
so has part: feature:4957985-4958037:-1:exon
so has part: feature:4955313-4955375:-1:exon
so has part: feature:4955178-4955216:-1:exon
so has part: feature:4946627-4946896:-1:exon
so has part: feature:4932595-4932716:-1:exon

XP_005363774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5057233-5057249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5054295-5054457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5048314-5048386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5041962-5042085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5035061-5035259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4973557-4973682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971911-4972009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4960136-4960233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4957985-4958037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4955313-4955375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4955178-4955216:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4946627-4946896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4932595-4932716:-1:exon

LOC113457937
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457937
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5184179..5184280
location: region:5184179-5184280:1
so has part: feature:5184179-5184280:1:exon
subclass of: SO_0000623

113457937
type: Gene
SIO_000068: ncbigene

position:5184179:1
position: 5184179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5184280:1
position: 5184280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5184179-5184280:1:exon

LOC113457937
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457937
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378405.1
SIO_010081: LOC113457937
subclass of: SO_0000673
so part of: LOC113457937
location: 5184179..5184280
location: region:5184179-5184280:1
so has part: feature:5184179-5184280:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5184179-5184280:1:exon

Nxph1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Nxph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5219285..5523550
location: region:5219285-5523550:1
so has part: feature:5219285-5523550:1:exon
subclass of: SO_0000010

101982327
type: Gene
SIO_000068: ncbigene

position:5219285:1
position: 5219285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5523550:1
position: 5523550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5219285-5523550:1:exon

Nxph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nxph1
product: neurexophilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005363718.3
SIO_010081: Nxph1
subclass of: SO_0000673
so part of: Nxph1
location: join(5219285..5219862,5220682..5220845,5521595..5523550)
location: region:5219285-5523550:1
so has part: feature:5219285-5219862:1:exon
so has part: feature:5220682-5220845:1:exon
so has part: feature:5521595-5523550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5219285-5219862:1:exon

position:5219862:1
position: 5219862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5220682-5220845:1:exon

position:5220682:1
position: 5220682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5220845:1
position: 5220845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5521595-5523550:1:exon

position:5521595:1
position: 5521595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nxph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nxph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexophilin-1
translation: MQAACWYVLLLLQPTVYLVTCANLTHGGKAELLKSGSSKSTLKHIWTESSKDLSISRLLSQTFRGKENDTDLDLRYDTPEPYSEQDLWDWLRNSTDLQEPRPRAKRRPIVKTGKFKKMFGWGDFHSNIKTVKLNLLITGKIVDHGNGTFSVYFRHNSTGQGNVSVSLVPPTKIVEFDLAQQTVIDAKDSKSFNCRIEYEKVDKATKNTLCNYDPSKTCYQEQTQSHVSWLCSKPFKVICIYISFYSTDYKLVQKVCPDYNYHSDTPYFPSG
SIO_010081: Nxph1
subclass of: SO_0000673
so part of: Nxph1
location: join(5220792..5220845,5521595..5522356)
location: region:5220792-5522356:1
so has part: feature:5220792-5220845:1:exon
so has part: feature:5521595-5522356:1:exon

XP_005363775.1
type: Protein
SIO_000068: ncbiprotein

position:5220792:1
position: 5220792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5522356:1
position: 5522356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5220792-5220845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5521595-5522356:1:exon

LOC113457936
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457936
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5989955..5990144
location: region:5989955-5990144:1
so has part: feature:5989955-5990144:1:exon
subclass of: SO_0000623

113457936
type: Gene
SIO_000068: ncbigene

position:5989955:1
position: 5989955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5990144:1
position: 5990144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5989955-5990144:1:exon

LOC113457936
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457936
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378404.1
SIO_010081: LOC113457936
subclass of: SO_0000673
so part of: LOC113457936
location: 5989955..5990144
location: region:5989955-5990144:1
so has part: feature:5989955-5990144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5989955-5990144:1:exon

LOC101981117
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6592923..6594252
location: region:6592923-6594252:1
so has part: feature:6592923-6594252:1:exon

101981117
type: Gene
SIO_000068: ncbigene

position:6592923:1
position: 6592923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6594252:1
position: 6594252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6592923-6594252:1:exon

LOC101981117
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC101981117
subclass of: SO_0000673
so part of: LOC101981117
location: 6592923..6594252
location: region:6592923-6594252:1
so has part: feature:6592923-6594252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6592923-6594252:1:exon

LOC101981403
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7150463..7152612)
location: region:7150463-7152612:-1
so has part: feature:7150463-7152612:-1:exon

101981403
type: Gene
SIO_000068: ncbigene

position:7150463:-1
position: 7150463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7152612:-1
position: 7152612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7150463-7152612:-1:exon

LOC101981403
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981403
subclass of: SO_0000673
so part of: LOC101981403
location: complement(7150463..7152612)
location: region:7150463-7152612:-1
so has part: feature:7150463-7152612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7150463-7152612:-1:exon

Ndufa4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ndufa4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7290225..7298218)
location: region:7290225-7298218:-1
so has part: feature:7290225-7298218:-1:exon
subclass of: SO_0000010

101982615
type: Gene
SIO_000068: ncbigene

position:7290225:-1
position: 7290225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7298218:-1
position: 7298218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7290225-7298218:-1:exon

Ndufa4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ndufa4
product: NDUFA4, mitochondrial complex associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_005363719.3
SIO_010081: Ndufa4
subclass of: SO_0000673
so part of: Ndufa4
location: complement(join(7290225..7290435,7295876..7295936,7296752..7296840,7297887..7298218))
location: region:7290225-7298218:-1
so has part: feature:7297887-7298218:-1:exon
so has part: feature:7296752-7296840:-1:exon
so has part: feature:7295876-7295936:-1:exon
so has part: feature:7290225-7290435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7297887-7298218:-1:exon

position:7297887:-1
position: 7297887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7296752-7296840:-1:exon

position:7296752:-1
position: 7296752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7296840:-1
position: 7296840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7295876-7295936:-1:exon

position:7295876:-1
position: 7295876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7295936:-1
position: 7295936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7290225-7290435:-1:exon

position:7290435:-1
position: 7290435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ndufa4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ndufa4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit NDUFA4
translation: MLRQIIGQAKKHPSLIPLFVFIGAGGTGAALYVMRLALFNPDVSWDRKNNPEPWNKLGPNEQYKFYSVNVDYSKLKKEGPDF
SIO_010081: Ndufa4
subclass of: SO_0000673
so part of: Ndufa4
location: complement(join(7290379..7290435,7295876..7295936,7296752..7296840,7297887..7297928))
location: region:7290379-7297928:-1
so has part: feature:7297887-7297928:-1:exon
so has part: feature:7296752-7296840:-1:exon
so has part: feature:7295876-7295936:-1:exon
so has part: feature:7290379-7290435:-1:exon

XP_005363776.1
type: Protein
SIO_000068: ncbiprotein

position:7290379:-1
position: 7290379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7297928:-1
position: 7297928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7297887-7297928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7296752-7296840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7295876-7295936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7290379-7290435:-1:exon

Phf14
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Phf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7324052..7439313
location: region:7324052-7439313:1
so has part: feature:7324052-7439313:1:exon
subclass of: SO_0000010

101982895
type: Gene
SIO_000068: ncbigene

position:7324052:1
position: 7324052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7439313:1
position: 7439313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7324052-7439313:1:exon

Phf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Phf14
product: PHD finger protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005363720.2
SIO_010081: Phf14
subclass of: SO_0000673
so part of: Phf14
location: join(7324052..7324201,7324675..7324785,7331225..7331991,7338730..7338874,7349126..7349285,7355194..7355305,7356151..7356288,7360037..7360183,7361704..7361974,7362284..7362390,7363584..7363679,7365396..7365499,7367366..7367497,7372985..7373153,7378236..7378286,7378397..7378518,7406257..7406374,7439116..7439313)
location: region:7324052-7439313:1
so has part: feature:7324052-7324201:1:exon
so has part: feature:7324675-7324785:1:exon
so has part: feature:7331225-7331991:1:exon
so has part: feature:7338730-7338874:1:exon
so has part: feature:7349126-7349285:1:exon
so has part: feature:7355194-7355305:1:exon
so has part: feature:7356151-7356288:1:exon
so has part: feature:7360037-7360183:1:exon
so has part: feature:7361704-7361974:1:exon
so has part: feature:7362284-7362390:1:exon
so has part: feature:7363584-7363679:1:exon
so has part: feature:7365396-7365499:1:exon
so has part: feature:7367366-7367497:1:exon
so has part: feature:7372985-7373153:1:exon
so has part: feature:7378236-7378286:1:exon
so has part: feature:7378397-7378518:1:exon
so has part: feature:7406257-7406374:1:exon
so has part: feature:7439116-7439313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7324052-7324201:1:exon

position:7324201:1
position: 7324201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7324675-7324785:1:exon

position:7324675:1
position: 7324675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7324785:1
position: 7324785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7331225-7331991:1:exon

position:7331225:1
position: 7331225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7331991:1
position: 7331991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7338730-7338874:1:exon

position:7338730:1
position: 7338730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7338874:1
position: 7338874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7349126-7349285:1:exon

position:7349126:1
position: 7349126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7349285:1
position: 7349285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7355194-7355305:1:exon

position:7355194:1
position: 7355194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7355305:1
position: 7355305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7356151-7356288:1:exon

position:7356151:1
position: 7356151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7356288:1
position: 7356288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7360037-7360183:1:exon

position:7360037:1
position: 7360037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7360183:1
position: 7360183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7361704-7361974:1:exon

position:7361704:1
position: 7361704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7361974:1
position: 7361974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7362284-7362390:1:exon

position:7362284:1
position: 7362284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7362390:1
position: 7362390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7363584-7363679:1:exon

position:7363584:1
position: 7363584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7363679:1
position: 7363679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7365396-7365499:1:exon

position:7365396:1
position: 7365396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7365499:1
position: 7365499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7367366-7367497:1:exon

position:7367366:1
position: 7367366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7367497:1
position: 7367497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7372985-7373153:1:exon

position:7372985:1
position: 7372985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7373153:1
position: 7373153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7378236-7378286:1:exon

position:7378236:1
position: 7378236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378286:1
position: 7378286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7378397-7378518:1:exon

position:7378397:1
position: 7378397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378518:1
position: 7378518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7406257-7406374:1:exon

position:7406257:1
position: 7406257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7406374:1
position: 7406374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7439116-7439313:1:exon

position:7439116:1
position: 7439116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Phf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Phf14
product: PHD finger protein 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_026787512.1
SIO_010081: Phf14
subclass of: SO_0000673
so part of: Phf14
location: join(7324052..7324201,7324675..7324785,7338730..7338874,7349126..7349285,7355194..7355305,7356151..7356288,7360037..7360183,7361704..7361974,7362284..7362390,7363584..7363679,7365396..7365499,7367366..7367497,7372985..7373153,7378236..7378286,7378397..7378518,7406257..7406374,7439116..7439313)
location: region:7324052-7439313:1
so has part: feature:7324052-7324201:1:exon
so has part: feature:7324675-7324785:1:exon
so has part: feature:7338730-7338874:1:exon
so has part: feature:7349126-7349285:1:exon
so has part: feature:7355194-7355305:1:exon
so has part: feature:7356151-7356288:1:exon
so has part: feature:7360037-7360183:1:exon
so has part: feature:7361704-7361974:1:exon
so has part: feature:7362284-7362390:1:exon
so has part: feature:7363584-7363679:1:exon
so has part: feature:7365396-7365499:1:exon
so has part: feature:7367366-7367497:1:exon
so has part: feature:7372985-7373153:1:exon
so has part: feature:7378236-7378286:1:exon
so has part: feature:7378397-7378518:1:exon
so has part: feature:7406257-7406374:1:exon
so has part: feature:7439116-7439313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7324052-7324201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7324675-7324785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7338730-7338874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7349126-7349285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7355194-7355305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7356151-7356288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7360037-7360183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7361704-7361974:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7362284-7362390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7363584-7363679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7365396-7365499:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7367366-7367497:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7372985-7373153:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7378236-7378286:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7378397-7378518:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7406257-7406374:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7439116-7439313:1:exon

Phf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Phf14
product: PHD finger protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_013352446.2
SIO_010081: Phf14
subclass of: SO_0000673
so part of: Phf14
location: join(7324052..7324201,7324675..7324785,7331225..7331991,7338730..7338874,7349126..7349285,7355194..7355305,7356151..7356288,7360037..7360183,7361704..7361974,7362284..7362390,7363584..7363679,7365396..7365499,7367366..7367497,7372985..7373153,7378236..7378286,7378397..7378518,7397301..7401953)
location: region:7324052-7401953:1
so has part: feature:7324052-7324201:1:exon
so has part: feature:7324675-7324785:1:exon
so has part: feature:7331225-7331991:1:exon
so has part: feature:7338730-7338874:1:exon
so has part: feature:7349126-7349285:1:exon
so has part: feature:7355194-7355305:1:exon
so has part: feature:7356151-7356288:1:exon
so has part: feature:7360037-7360183:1:exon
so has part: feature:7361704-7361974:1:exon
so has part: feature:7362284-7362390:1:exon
so has part: feature:7363584-7363679:1:exon
so has part: feature:7365396-7365499:1:exon
so has part: feature:7367366-7367497:1:exon
so has part: feature:7372985-7373153:1:exon
so has part: feature:7378236-7378286:1:exon
so has part: feature:7378397-7378518:1:exon
so has part: feature:7397301-7401953:1:exon

position:7401953:1
position: 7401953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7324052-7324201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7324675-7324785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7331225-7331991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7338730-7338874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349126-7349285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7355194-7355305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7356151-7356288:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360037-7360183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7361704-7361974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7362284-7362390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363584-7363679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7365396-7365499:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7367366-7367497:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372985-7373153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7378236-7378286:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7378397-7378518:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7397301-7401953:1:exon

position:7397301:1
position: 7397301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Phf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Phf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 14 isoform X1
translation: MDRSSKRRQVKPLAASLLEALDYDSSDDSDFKVGDASDSEGSGHGSEDPSKDSGEGSCSDSEENNLEEELSEDIQIREEQLKHSTEEEVVPSDKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEREKAAVSDSAAASAAATRATSPAVTSPSVPATTTTTTTTTDEQVSEPKKWNLRRNRPLLDFVSMEELNDMDDYDSEDDNDWRPTVVKRKGRSASQKEGSDGDNEDDEDEGSGSDEDENDEGHDEDHSSPASDAGCKKKKSKVLSRNSADDEELTNDSLTLSQSKSNEDSLILEKSQNWSSQKMDHILICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGVSPSCELCPNQDGIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPVTLTEMNYSKYGAKECSFCEDTRFARTGVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPFFAYCKQHADRLDRKWKRKNYLALQSYCKMSLQEREKQLSPEAQARINARLQQYRAKAELARSTRPQAWVPREKLPRPLTSSASAIRKLMRKAELMGISTDIFPVDNSDTSSSVDGRRKHKQPALTADFVNYYFERNMRMIQIQENMAEQKNIKDKLENEQEKLHVEYNKLCESLEELQNLNGKLRSEGQGIWALLGRITGQKLNVPAILRAPKERKPSKKEGGTHKTSALPTVLYSCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEADMAMETLPDGTKRSRRQIKEPVKFVPQDVPPEPKKIPIRNTRTRGRKRSFVPEEEKHEERVPRERRQRQSVLQKKPKAEDLRTECATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDSSSSKEDENEAERKNASQEFSVEQKNAKK
SIO_010081: Phf14
subclass of: SO_0000673
so part of: Phf14
location: join(7324201,7324675..7324785,7331225..7331991,7338730..7338874,7349126..7349285,7355194..7355305,7356151..7356288,7360037..7360183,7361704..7361974,7362284..7362390,7363584..7363679,7365396..7365499,7367366..7367497,7372985..7373153,7378236..7378286,7378397..7378518,7406257..7406374,7439116..7439190)
location: region:7324201-7439190:1
so has part: feature:7324201-7324201:1:exon
so has part: feature:7324675-7324785:1:exon
so has part: feature:7331225-7331991:1:exon
so has part: feature:7338730-7338874:1:exon
so has part: feature:7349126-7349285:1:exon
so has part: feature:7355194-7355305:1:exon
so has part: feature:7356151-7356288:1:exon
so has part: feature:7360037-7360183:1:exon
so has part: feature:7361704-7361974:1:exon
so has part: feature:7362284-7362390:1:exon
so has part: feature:7363584-7363679:1:exon
so has part: feature:7365396-7365499:1:exon
so has part: feature:7367366-7367497:1:exon
so has part: feature:7372985-7373153:1:exon
so has part: feature:7378236-7378286:1:exon
so has part: feature:7378397-7378518:1:exon
so has part: feature:7406257-7406374:1:exon
so has part: feature:7439116-7439190:1:exon

XP_005363777.1
type: Protein
SIO_000068: ncbiprotein

position:7439190:1
position: 7439190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7324201-7324201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7324675-7324785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7331225-7331991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7338730-7338874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349126-7349285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7355194-7355305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7356151-7356288:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360037-7360183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7361704-7361974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7362284-7362390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363584-7363679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7365396-7365499:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7367366-7367497:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372985-7373153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7378236-7378286:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7378397-7378518:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7406257-7406374:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7439116-7439190:1:exon

Phf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Phf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 14 isoform X2
translation: MDRSSKRRQVKPLAASLLEALDYDSSDDSDFKVGDASDSEGSGHGSEDPSKDSGEGSCSDSEENNLEEELSEDIQIREEQLKHSTEEEVVPSDKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEREKAAVSDSAAASAAATRATSPAVTSPSVPATTTTTTTTTDEQVSEPKKWNLRRNRPLLDFVSMEELNDMDDYDSEDDNDWRPTVVKRKGRSASQKEGSDGDNEDDEDEGSGSDEDENDEGHDEDHSSPASDAGCKKKKSKVLSRNSADDEELTNDSLTLSQSKSNEDSLILEKSQNWSSQKMDHILICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGVSPSCELCPNQDGIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPVTLTEMNYSKYGAKECSFCEDTRFARTGVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPFFAYCKQHADRLDRKWKRKNYLALQSYCKMSLQEREKQLSPEAQARINARLQQYRAKAELARSTRPQAWVPREKLPRPLTSSASAIRKLMRKAELMGISTDIFPVDNSDTSSSVDGRRKHKQPALTADFVNYYFERNMRMIQIQENMAEQKNIKDKLENEQEKLHVEYNKLCESLEELQNLNGKLRSEGQGIWALLGRITGQKLNVPAILRAPKERKPSKKEGGTHKTSALPTVLYSCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEADMAMETLPDGTKRSRRQIKEPVKFVPQDVPPEPKKIPIRNTRTRGRKRSFVPEEEKHEERVPRERRQRQSVLQKKPKAEDLRTECATCKGTGDNENLVRYPS
SIO_010081: Phf14
subclass of: SO_0000673
so part of: Phf14
location: join(7324201,7324675..7324785,7331225..7331991,7338730..7338874,7349126..7349285,7355194..7355305,7356151..7356288,7360037..7360183,7361704..7361974,7362284..7362390,7363584..7363679,7365396..7365499,7367366..7367497,7372985..7373153,7378236..7378286,7378397..7378518,7397301..7397313)
location: region:7324201-7397313:1
so has part: feature:7324201-7324201:1:exon
so has part: feature:7324675-7324785:1:exon
so has part: feature:7331225-7331991:1:exon
so has part: feature:7338730-7338874:1:exon
so has part: feature:7349126-7349285:1:exon
so has part: feature:7355194-7355305:1:exon
so has part: feature:7356151-7356288:1:exon
so has part: feature:7360037-7360183:1:exon
so has part: feature:7361704-7361974:1:exon
so has part: feature:7362284-7362390:1:exon
so has part: feature:7363584-7363679:1:exon
so has part: feature:7365396-7365499:1:exon
so has part: feature:7367366-7367497:1:exon
so has part: feature:7372985-7373153:1:exon
so has part: feature:7378236-7378286:1:exon
so has part: feature:7378397-7378518:1:exon
so has part: feature:7397301-7397313:1:exon

XP_013207900.1
type: Protein
SIO_000068: ncbiprotein

position:7397313:1
position: 7397313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7324201-7324201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7324675-7324785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7331225-7331991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7338730-7338874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349126-7349285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7355194-7355305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7356151-7356288:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360037-7360183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7361704-7361974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7362284-7362390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363584-7363679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7365396-7365499:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7367366-7367497:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372985-7373153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7378236-7378286:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7378397-7378518:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7397301-7397313:1:exon

Phf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Phf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 14 isoform X3
translation: MIVQMTVILKLEMLQDSLILEKSQNWSSQKMDHILICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGVSPSCELCPNQDGIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPVTLTEMNYSKYGAKECSFCEDTRFARTGVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPFFAYCKQHADRLDRKWKRKNYLALQSYCKMSLQEREKQLSPEAQARINARLQQYRAKAELARSTRPQAWVPREKLPRPLTSSASAIRKLMRKAELMGISTDIFPVDNSDTSSSVDGRRKHKQPALTADFVNYYFERNMRMIQIQENMAEQKNIKDKLENEQEKLHVEYNKLCESLEELQNLNGKLRSEGQGIWALLGRITGQKLNVPAILRAPKERKPSKKEGGTHKTSALPTVLYSCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEADMAMETLPDGTKRSRRQIKEPVKFVPQDVPPEPKKIPIRNTRTRGRKRSFVPEEEKHEERVPRERRQRQSVLQKKPKAEDLRTECATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDSSSSKEDENEAERKNASQEFSVEQKNAKK
SIO_010081: Phf14
subclass of: SO_0000673
so part of: Phf14
location: join(7324741..7324785,7338730..7338874,7349126..7349285,7355194..7355305,7356151..7356288,7360037..7360183,7361704..7361974,7362284..7362390,7363584..7363679,7365396..7365499,7367366..7367497,7372985..7373153,7378236..7378286,7378397..7378518,7406257..7406374,7439116..7439190)
location: region:7324741-7439190:1
so has part: feature:7324741-7324785:1:exon
so has part: feature:7338730-7338874:1:exon
so has part: feature:7349126-7349285:1:exon
so has part: feature:7355194-7355305:1:exon
so has part: feature:7356151-7356288:1:exon
so has part: feature:7360037-7360183:1:exon
so has part: feature:7361704-7361974:1:exon
so has part: feature:7362284-7362390:1:exon
so has part: feature:7363584-7363679:1:exon
so has part: feature:7365396-7365499:1:exon
so has part: feature:7367366-7367497:1:exon
so has part: feature:7372985-7373153:1:exon
so has part: feature:7378236-7378286:1:exon
so has part: feature:7378397-7378518:1:exon
so has part: feature:7406257-7406374:1:exon
so has part: feature:7439116-7439190:1:exon

XP_026643313.1
type: Protein
SIO_000068: ncbiprotein

position:7324741:1
position: 7324741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7324741-7324785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7338730-7338874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7349126-7349285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7355194-7355305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7356151-7356288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7360037-7360183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7361704-7361974:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7362284-7362390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7363584-7363679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7365396-7365499:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7367366-7367497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7372985-7373153:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378236-7378286:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7378397-7378518:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7406257-7406374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7439116-7439190:1:exon

LOC101983178
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101983178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7567987..7572952
location: region:7567987-7572952:1
so has part: feature:7567987-7572952:1:exon
subclass of: SO_0000010

101983178
type: Gene
SIO_000068: ncbigene

position:7567987:1
position: 7567987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7572952:1
position: 7572952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7567987-7572952:1:exon

LOC101983178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101983178
product: retinol dehydrogenase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005363721.2
SIO_010081: LOC101983178
subclass of: SO_0000673
so part of: LOC101983178
location: join(7567987..7568423,7570513..7570771,7571972..7572135,7572629..7572952)
location: region:7567987-7572952:1
so has part: feature:7567987-7568423:1:exon
so has part: feature:7570513-7570771:1:exon
so has part: feature:7571972-7572135:1:exon
so has part: feature:7572629-7572952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7567987-7568423:1:exon

position:7568423:1
position: 7568423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7570513-7570771:1:exon

position:7570513:1
position: 7570513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7570771:1
position: 7570771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7571972-7572135:1:exon

position:7571972:1
position: 7571972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7572135:1
position: 7572135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7572629-7572952:1:exon

position:7572629:1
position: 7572629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101983178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101983178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 2-like
translation: MWLYLVALVGLWTLLRLIRERQVVSHLQDKHVFITGCDTGFGNLLARLLDRRGMRVLAACLTEKGAEELRNKTSDRLETVILDVTNTENIVAATKWVKERVGNRGLWGLVNNAGIAIPSGLNEWMNKEDFAKILNVNLLGLIEVTLSMLPLVRKARGRVVNVSSIMGRVSFSGGGYSISKYGVEAFSDSLRRELSYFGVKVAIIEPGFFQTAITSSDRHSLHSQMLWDRASSEVKEIYDEKFLSSYLTGLKLLDKVCNKDLSLVTDCMEHALTSCHPRTRYSPGWDAKLVYIPVSYLPTCLADVILFWTFPKPEKAL
SIO_010081: LOC101983178
subclass of: SO_0000673
so part of: LOC101983178
location: join(7568111..7568423,7570513..7570771,7571972..7572135,7572629..7572846)
location: region:7568111-7572846:1
so has part: feature:7568111-7568423:1:exon
so has part: feature:7570513-7570771:1:exon
so has part: feature:7571972-7572135:1:exon
so has part: feature:7572629-7572846:1:exon

XP_005363778.1
type: Protein
SIO_000068: ncbiprotein

position:7568111:1
position: 7568111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7572846:1
position: 7572846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7568111-7568423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7570513-7570771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7571972-7572135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7572629-7572846:1:exon

Thsd7a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Thsd7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7645329..8047824)
location: region:7645329-8047824:-1
so has part: feature:7645329-8047824:-1:exon
subclass of: SO_0000010

101983467
type: Gene
SIO_000068: ncbigene

position:7645329:-1
position: 7645329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8047824:-1
position: 8047824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7645329-8047824:-1:exon

Thsd7a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Thsd7a
product: thrombospondin type 1 domain containing 7A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_013352455.2
SIO_010081: Thsd7a
subclass of: SO_0000673
so part of: Thsd7a
location: complement(join(7645329..7648472,7649584..7649671,7652321..7652531,7652877..7652959,7655876..7655971,7662268..7662441,7664308..7664482,7664900..7665045,7665285..7665402,7668987..7669102,7670389..7670533,7674076..7674229,7679166..7679299,7680763..7680768,7683006..7683184,7694042..7694305,7695811..7696005,7713340..7713443,7714560..7714692,7719950..7720065,7724038..7724272,7734444..7734638,7779648..7779860,7781343..7781498,7812237..7812418,7814836..7815084,7861803..7862634,8047326..8047824))
location: region:7645329-8047824:-1
so has part: feature:8047326-8047824:-1:exon
so has part: feature:7861803-7862634:-1:exon
so has part: feature:7814836-7815084:-1:exon
so has part: feature:7812237-7812418:-1:exon
so has part: feature:7781343-7781498:-1:exon
so has part: feature:7779648-7779860:-1:exon
so has part: feature:7734444-7734638:-1:exon
so has part: feature:7724038-7724272:-1:exon
so has part: feature:7719950-7720065:-1:exon
so has part: feature:7714560-7714692:-1:exon
so has part: feature:7713340-7713443:-1:exon
so has part: feature:7695811-7696005:-1:exon
so has part: feature:7694042-7694305:-1:exon
so has part: feature:7683006-7683184:-1:exon
so has part: feature:7680763-7680768:-1:exon
so has part: feature:7679166-7679299:-1:exon
so has part: feature:7674076-7674229:-1:exon
so has part: feature:7670389-7670533:-1:exon
so has part: feature:7668987-7669102:-1:exon
so has part: feature:7665285-7665402:-1:exon
so has part: feature:7664900-7665045:-1:exon
so has part: feature:7664308-7664482:-1:exon
so has part: feature:7662268-7662441:-1:exon
so has part: feature:7655876-7655971:-1:exon
so has part: feature:7652877-7652959:-1:exon
so has part: feature:7652321-7652531:-1:exon
so has part: feature:7649584-7649671:-1:exon
so has part: feature:7645329-7648472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8047326-8047824:-1:exon

position:8047326:-1
position: 8047326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7861803-7862634:-1:exon

position:7861803:-1
position: 7861803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7862634:-1
position: 7862634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7814836-7815084:-1:exon

position:7814836:-1
position: 7814836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7815084:-1
position: 7815084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7812237-7812418:-1:exon

position:7812237:-1
position: 7812237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7812418:-1
position: 7812418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7781343-7781498:-1:exon

position:7781343:-1
position: 7781343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7781498:-1
position: 7781498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7779648-7779860:-1:exon

position:7779648:-1
position: 7779648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7779860:-1
position: 7779860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7734444-7734638:-1:exon

position:7734444:-1
position: 7734444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7734638:-1
position: 7734638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7724038-7724272:-1:exon

position:7724038:-1
position: 7724038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7724272:-1
position: 7724272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7719950-7720065:-1:exon

position:7719950:-1
position: 7719950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7720065:-1
position: 7720065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7714560-7714692:-1:exon

position:7714560:-1
position: 7714560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7714692:-1
position: 7714692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7713340-7713443:-1:exon

position:7713340:-1
position: 7713340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7713443:-1
position: 7713443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7695811-7696005:-1:exon

position:7695811:-1
position: 7695811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7696005:-1
position: 7696005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7694042-7694305:-1:exon

position:7694042:-1
position: 7694042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7694305:-1
position: 7694305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7683006-7683184:-1:exon

position:7683006:-1
position: 7683006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7683184:-1
position: 7683184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7680763-7680768:-1:exon

position:7680763:-1
position: 7680763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7680768:-1
position: 7680768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7679166-7679299:-1:exon

position:7679166:-1
position: 7679166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7679299:-1
position: 7679299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7674076-7674229:-1:exon

position:7674076:-1
position: 7674076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7674229:-1
position: 7674229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7670389-7670533:-1:exon

position:7670389:-1
position: 7670389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7670533:-1
position: 7670533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7668987-7669102:-1:exon

position:7668987:-1
position: 7668987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7669102:-1
position: 7669102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7665285-7665402:-1:exon

position:7665285:-1
position: 7665285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7665402:-1
position: 7665402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7664900-7665045:-1:exon

position:7664900:-1
position: 7664900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7665045:-1
position: 7665045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7664308-7664482:-1:exon

position:7664308:-1
position: 7664308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7664482:-1
position: 7664482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7662268-7662441:-1:exon

position:7662268:-1
position: 7662268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7662441:-1
position: 7662441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7655876-7655971:-1:exon

position:7655876:-1
position: 7655876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7655971:-1
position: 7655971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7652877-7652959:-1:exon

position:7652877:-1
position: 7652877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652959:-1
position: 7652959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7652321-7652531:-1:exon

position:7652321:-1
position: 7652321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652531:-1
position: 7652531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7649584-7649671:-1:exon

position:7649584:-1
position: 7649584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7649671:-1
position: 7649671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7645329-7648472:-1:exon

position:7648472:-1
position: 7648472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Thsd7a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Thsd7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thrombospondin type-1 domain-containing protein 7A
translation: MGLRAGRLESPSRGVLQLLRLPLLLLLLLSSGARGAEAQGDAEVPTLYLWRTGTWGRCMGNECGPGGIQSRSVWCAHVEGWTTLPANCKQAGRPSTQQNCFKVCDWHKELYDWRLGPWNQCQPVISKSLDKTRECVKGEEGIQVREITCIQKDKDLPAEDIICEYFEPKPLLEQACLIPCQQDCIVSEFSAWSECSRTCGSGLQHRTRHVVAPPQFGGSSCPNLTEFQVCQSNPCEAEESMYSLQVGPWSACSVSHSRQTRQARRRGKNKERERERGKVVKDPEARELIKKKRNRNRQNRQENRYWDIQIGYQTRDVMCTNKTGKATDLSFCQQEKMPMTFQSCVITKECQVSEWSEWSPCSKTCHDVTSPAGTRVRTRAIKQFPIGTEKECSELEEKEPCLSQGDGAVLCATYGWRTAEWTECHVDPLLSQQDKRRANQTALCGAGIQTREVYCAQTNDNPLSHLDTQKDKEASKPVDSKLCSGPIPSTMQLCHIPCPVECEVSPWSAWGPCTYENCNDQQGRKGFKLRKRRITNEPTGGLGATGNCPHLLEAIPCEEPSCYDWKAVRLGDCEPDNGKDCGSGTQVQEVVCINSDGEEVDRQLCRDAIFPIPVACDAPCPKDCVLTAWSTWSSCSHTCSGKTTEGKQIRARSILAYAGDEGGIRCPNSSALQEVRSCNEHPCTVYHWQTGPWGQCIEDTSGSSFNTTTTWNGEASCSVGMQTRKVICVRVNVGQVGPKKCPESLRPETVRPCLLPCRKDCIVTPYSDWTPCPSSCREGNSGTRKQSRHRVIIQLPTNGGRDCSDPLYEEKACEAPPTCHSYRWKTHKWRRCQLVPWSIQQDVPGAQEGCGPGRQARAITCRKQDGGQASIQECLQHAGPVPALTQACQIPCQDDCQFTSWSKFSSCNGDCGAVRTRKRAIVGKSKKKEKCKNSHLYPLLETQYCPCDKYNAQPVGNWSDCILPEGKAEVLLGMKVQEDSKECGQGYRYQAMACYDQNGRLVETSRCNSHGYIEEACIIPCPSDCKLSEWSNWSRCSKSCGSGVKVRSKWLREKPYNGGRPCPKLDHVNQAQVYEVVPCHSDCNQYIWVTEPWGVCKVTFVNMRENCGEGVQTRKVRCMQNTADGPSEHAEDYLCDPEDMPLGSRECKLPCPEDCVISEWGPWTQCALPCNPSGSRQRSAEPIRQPADEGRVCPDAVEKEPCSLNKNCYHYDYNVTDWSTCQLSEKAVCGNGIKTRMLDCVRSDGKSVDLKYCEELGLEKNWQMNTSCMVECPLNCQLSDWSPWSECSQSCGLTGKMFRRRTVTQPFQGDGRPCPSLMEQSKPCPVKPCYCWQYGQWSPCQVQDAQCGEGTRTRNISCVVTDGSTDDFSKAVDEEFCADIELVVDGNKQIVLEETCTQPCPGDCYLNDWSSWSLCQLTCVNGEDLGFGGIQVRSRAVIIQELENQHLCPEQMLETKSCDDGQCYEYKWMASAWKGSSRTVWCQRSDGVNVTGGCLVVSQPDADRSCNPPCSQPHSYCSEMKVCRCEEGYTEVMSSNSTLEQCTLIPVVVIPTVEDKRGDVKTSRAVHPTQPSTHPTGRGRTWFLQPFGPDGRLKTWVYGVAAGAFVLFVFVVSMIYLACKKPKKPQRRQNNRLKPLTLAYDGDADM
SIO_010081: Thsd7a
subclass of: SO_0000673
so part of: Thsd7a
location: complement(join(7648388..7648472,7649584..7649671,7652321..7652531,7652877..7652959,7655876..7655971,7662268..7662441,7664308..7664482,7664900..7665045,7665285..7665402,7668987..7669102,7670389..7670533,7674076..7674229,7679166..7679299,7680763..7680768,7683006..7683184,7694042..7694305,7695811..7696005,7713340..7713443,7714560..7714692,7719950..7720065,7724038..7724272,7734444..7734638,7779648..7779860,7781343..7781498,7812237..7812418,7814836..7815084,7861803..7862634,8047326..8047482))
location: region:7648388-8047482:-1
so has part: feature:8047326-8047482:-1:exon
so has part: feature:7861803-7862634:-1:exon
so has part: feature:7814836-7815084:-1:exon
so has part: feature:7812237-7812418:-1:exon
so has part: feature:7781343-7781498:-1:exon
so has part: feature:7779648-7779860:-1:exon
so has part: feature:7734444-7734638:-1:exon
so has part: feature:7724038-7724272:-1:exon
so has part: feature:7719950-7720065:-1:exon
so has part: feature:7714560-7714692:-1:exon
so has part: feature:7713340-7713443:-1:exon
so has part: feature:7695811-7696005:-1:exon
so has part: feature:7694042-7694305:-1:exon
so has part: feature:7683006-7683184:-1:exon
so has part: feature:7680763-7680768:-1:exon
so has part: feature:7679166-7679299:-1:exon
so has part: feature:7674076-7674229:-1:exon
so has part: feature:7670389-7670533:-1:exon
so has part: feature:7668987-7669102:-1:exon
so has part: feature:7665285-7665402:-1:exon
so has part: feature:7664900-7665045:-1:exon
so has part: feature:7664308-7664482:-1:exon
so has part: feature:7662268-7662441:-1:exon
so has part: feature:7655876-7655971:-1:exon
so has part: feature:7652877-7652959:-1:exon
so has part: feature:7652321-7652531:-1:exon
so has part: feature:7649584-7649671:-1:exon
so has part: feature:7648388-7648472:-1:exon

XP_013207909.2
type: Protein
SIO_000068: ncbiprotein

position:7648388:-1
position: 7648388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8047482:-1
position: 8047482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8047326-8047482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7861803-7862634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7814836-7815084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7812237-7812418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7781343-7781498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7779648-7779860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7734444-7734638:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7724038-7724272:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7719950-7720065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7714560-7714692:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7713340-7713443:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7695811-7696005:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7694042-7694305:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7683006-7683184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7680763-7680768:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7679166-7679299:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7674076-7674229:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7670389-7670533:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7668987-7669102:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7665285-7665402:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7664900-7665045:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7664308-7664482:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7662268-7662441:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7655876-7655971:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7652877-7652959:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7652321-7652531:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7649584-7649671:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7648388-7648472:-1:exon

LOC101981664
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8342071..8343323
location: region:8342071-8343323:1
so has part: feature:8342071-8343323:1:exon

101981664
type: Gene
SIO_000068: ncbigene

position:8342071:1
position: 8342071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8343323:1
position: 8343323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8342071-8343323:1:exon

LOC101981664
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981664
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981664
subclass of: SO_0000673
so part of: LOC101981664
location: 8342071..8343323
location: region:8342071-8343323:1
so has part: feature:8342071-8343323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8342071-8343323:1:exon

Tmem106b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmem106b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8372054..8394904
location: region:8372054-8394904:1
so has part: feature:8372054-8394904:1:exon
subclass of: SO_0000010

101983740
type: Gene
SIO_000068: ncbigene

position:8372054:1
position: 8372054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8394904:1
position: 8394904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8372054-8394904:1:exon

Tmem106b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmem106b
product: transmembrane protein 106B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005363723.3
SIO_010081: Tmem106b
subclass of: SO_0000673
so part of: Tmem106b
location: join(8372054..8372205,8372526..8372626,8374189..8374410,8377226..8377289,8382057..8382216,8390530..8390670,8390904..8390953,8391861..8391914,8393715..8394904)
location: region:8372054-8394904:1
so has part: feature:8372054-8372205:1:exon
so has part: feature:8372526-8372626:1:exon
so has part: feature:8374189-8374410:1:exon
so has part: feature:8377226-8377289:1:exon
so has part: feature:8382057-8382216:1:exon
so has part: feature:8390530-8390670:1:exon
so has part: feature:8390904-8390953:1:exon
so has part: feature:8391861-8391914:1:exon
so has part: feature:8393715-8394904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8372054-8372205:1:exon

position:8372205:1
position: 8372205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8372526-8372626:1:exon

position:8372526:1
position: 8372526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8372626:1
position: 8372626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8374189-8374410:1:exon

position:8374189:1
position: 8374189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8374410:1
position: 8374410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8377226-8377289:1:exon

position:8377226:1
position: 8377226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8377289:1
position: 8377289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8382057-8382216:1:exon

position:8382057:1
position: 8382057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8382216:1
position: 8382216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8390530-8390670:1:exon

position:8390530:1
position: 8390530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8390670:1
position: 8390670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8390904-8390953:1:exon

position:8390904:1
position: 8390904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8390953:1
position: 8390953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8391861-8391914:1:exon

position:8391861:1
position: 8391861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8391914:1
position: 8391914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8393715-8394904:1:exon

position:8393715:1
position: 8393715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmem106b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmem106b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106B
translation: MGKSLSHLPLHSNKEDGYDGVTSTDNLRNGLVSNEVHNEDGRNGDVSQFPYVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMASVSVCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSYDFQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFSKTVIGKARLNNITNIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLVSIKVHNIVLMMQVTVTTTYFGHSEQISQERYQYVDCGRNTTYQLAQSEYLNVLQPQQ
SIO_010081: Tmem106b
subclass of: SO_0000673
so part of: Tmem106b
location: join(8374191..8374410,8377226..8377289,8382057..8382216,8390530..8390670,8390904..8390953,8391861..8391914,8393715..8393853)
location: region:8374191-8393853:1
so has part: feature:8374191-8374410:1:exon
so has part: feature:8377226-8377289:1:exon
so has part: feature:8382057-8382216:1:exon
so has part: feature:8390530-8390670:1:exon
so has part: feature:8390904-8390953:1:exon
so has part: feature:8391861-8391914:1:exon
so has part: feature:8393715-8393853:1:exon

XP_005363780.1
type: Protein
SIO_000068: ncbiprotein

position:8374191:1
position: 8374191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8393853:1
position: 8393853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8374191-8374410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8377226-8377289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8382057-8382216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8390530-8390670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8390904-8390953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8391861-8391914:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8393715-8393853:1:exon

Vwde
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Vwde
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8447645..8515840)
location: region:8447645-8515840:-1
so has part: feature:8447645-8515840:-1:exon
subclass of: SO_0000010

101981942
type: Gene
SIO_000068: ncbigene

position:8447645:-1
position: 8447645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8515840:-1
position: 8515840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8447645-8515840:-1:exon

Vwde
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Vwde
product: von Willebrand factor D and EGF domains
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026787515.1
SIO_010081: Vwde
subclass of: SO_0000673
so part of: Vwde
location: complement(join(8447645..8447695,8449152..8449255,8451731..8451826,8453339..8453434,8453528..8453623,8463165..8463260,8465043..8465138,8465728..8465823,8467177..8467272,8467356..8467451,8468860..8469423,8471397..8471450,8473624..8473756,8474886..8475136,8477046..8477160,8478967..8479071,8479177..8479332,8482914..8483050,8484529..8485463,8485606..8485814,8491578..8491851,8493278..8493351,8493777..8493994,8495574..8495712,8497594..8497683,8503062..8503309,8505691..8505756,8507179..8507410,8510811..8510989,8515771..8515840))
location: region:8447645-8515840:-1
so has part: feature:8515771-8515840:-1:exon
so has part: feature:8510811-8510989:-1:exon
so has part: feature:8507179-8507410:-1:exon
so has part: feature:8505691-8505756:-1:exon
so has part: feature:8503062-8503309:-1:exon
so has part: feature:8497594-8497683:-1:exon
so has part: feature:8495574-8495712:-1:exon
so has part: feature:8493777-8493994:-1:exon
so has part: feature:8493278-8493351:-1:exon
so has part: feature:8491578-8491851:-1:exon
so has part: feature:8485606-8485814:-1:exon
so has part: feature:8484529-8485463:-1:exon
so has part: feature:8482914-8483050:-1:exon
so has part: feature:8479177-8479332:-1:exon
so has part: feature:8478967-8479071:-1:exon
so has part: feature:8477046-8477160:-1:exon
so has part: feature:8474886-8475136:-1:exon
so has part: feature:8473624-8473756:-1:exon
so has part: feature:8471397-8471450:-1:exon
so has part: feature:8468860-8469423:-1:exon
so has part: feature:8467356-8467451:-1:exon
so has part: feature:8467177-8467272:-1:exon
so has part: feature:8465728-8465823:-1:exon
so has part: feature:8465043-8465138:-1:exon
so has part: feature:8463165-8463260:-1:exon
so has part: feature:8453528-8453623:-1:exon
so has part: feature:8453339-8453434:-1:exon
so has part: feature:8451731-8451826:-1:exon
so has part: feature:8449152-8449255:-1:exon
so has part: feature:8447645-8447695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8515771-8515840:-1:exon

position:8515771:-1
position: 8515771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8510811-8510989:-1:exon

position:8510811:-1
position: 8510811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8510989:-1
position: 8510989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8507179-8507410:-1:exon

position:8507179:-1
position: 8507179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8507410:-1
position: 8507410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8505691-8505756:-1:exon

position:8505691:-1
position: 8505691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8505756:-1
position: 8505756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8503062-8503309:-1:exon

position:8503062:-1
position: 8503062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8503309:-1
position: 8503309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8497594-8497683:-1:exon

position:8497594:-1
position: 8497594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8497683:-1
position: 8497683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8495574-8495712:-1:exon

position:8495574:-1
position: 8495574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8495712:-1
position: 8495712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8493777-8493994:-1:exon

position:8493777:-1
position: 8493777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8493994:-1
position: 8493994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8493278-8493351:-1:exon

position:8493278:-1
position: 8493278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8493351:-1
position: 8493351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8491578-8491851:-1:exon

position:8491578:-1
position: 8491578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8491851:-1
position: 8491851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8485606-8485814:-1:exon

position:8485606:-1
position: 8485606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8485814:-1
position: 8485814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8484529-8485463:-1:exon

position:8484529:-1
position: 8484529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8485463:-1
position: 8485463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8482914-8483050:-1:exon

position:8482914:-1
position: 8482914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8483050:-1
position: 8483050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8479177-8479332:-1:exon

position:8479177:-1
position: 8479177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8479332:-1
position: 8479332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8478967-8479071:-1:exon

position:8478967:-1
position: 8478967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8479071:-1
position: 8479071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8477046-8477160:-1:exon

position:8477046:-1
position: 8477046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8477160:-1
position: 8477160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8474886-8475136:-1:exon

position:8474886:-1
position: 8474886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8475136:-1
position: 8475136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8473624-8473756:-1:exon

position:8473624:-1
position: 8473624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8473756:-1
position: 8473756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8471397-8471450:-1:exon

position:8471397:-1
position: 8471397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8471450:-1
position: 8471450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8468860-8469423:-1:exon

position:8468860:-1
position: 8468860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8469423:-1
position: 8469423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8467356-8467451:-1:exon

position:8467356:-1
position: 8467356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8467451:-1
position: 8467451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8467177-8467272:-1:exon

position:8467177:-1
position: 8467177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8467272:-1
position: 8467272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:8465728-8465823:-1:exon

position:8465728:-1
position: 8465728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8465823:-1
position: 8465823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:8465043-8465138:-1:exon

position:8465043:-1
position: 8465043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8465138:-1
position: 8465138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:8463165-8463260:-1:exon

position:8463165:-1
position: 8463165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8463260:-1
position: 8463260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:8453528-8453623:-1:exon

position:8453528:-1
position: 8453528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8453623:-1
position: 8453623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:8453339-8453434:-1:exon

position:8453339:-1
position: 8453339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8453434:-1
position: 8453434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:8451731-8451826:-1:exon

position:8451731:-1
position: 8451731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8451826:-1
position: 8451826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:8449152-8449255:-1:exon

position:8449152:-1
position: 8449152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8449255:-1
position: 8449255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:8447645-8447695:-1:exon

position:8447695:-1
position: 8447695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Vwde
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Vwde
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor D and EGF domain-containing protein
translation: MPGGAWACLVTALMLLVLGEDQQECSPGGHQFLRSPYRSVHFDSVYLQHSAAQNLICDHSLIPGWYRFLIFDRPAEMPTKCVEMNHCGTQAPIWLSLSGSEKLPLPGEIKQLRACATWQFLFSTEKDCCLFQIPVSVRNCGDFFVYFLQPTQGCMAYCAEAISDVKLHTCGPGEIEIGGDCIGWLSTVSPPPPPGSPKVTVELVDSQVFCRCAFDVPPMNNSVGFLIAWSRFSSQEIKEELRQESTLQAFSLLELDGINLRLGDKIFCSASIFLLEKPDVQSIAVESQGFFAGIRLKPELSTISEDGKEYQLRVESTIPIVCSEFSDQGCKISLRLRTIEQGKEHLGLNLALSSCHVDLYQNSSCSNGICSHAAVYYTAMTDFSRDGDRVTDITVEPVVSEHFLWDKYIPDSIQIKVKDVPSAYCYSFTDPHIITFDGRVYDNFKMGTFVLYKSVSRDFEIHVRQWDCGSLQYPGSCNCGFVAKEESDIVTFDMCSAHLYESPQYLFVKSQDSSSSNIRITESYLRRKITVWFSSGAFIRADLSVWGMSLTLRAPSLDYRNTLGLCGTFDENPENDFHDKNGITIDHDANNYLAFINEWRLLPGRSMFDKSPASQQFLAKLSYCSCLVGTASQHLDSGSRLEMASSCKDHKDIQFSSLIPGLDITSEYIDTEALVRKISTHAPEEENNLNFLLQEKAHTNLTKLELRLQHPENETQNPPKFFSNERHTQAWEIRSNPQNRRKRRNLKDLFPMFDFQGLGQTNLEEFSYFFPEDHTDDSQQEFVPSWPTASGLTELSILALCQQTLVNSSIGRLCLPFLGSTLNRAIDMCVHDILRKDDVRWAEAGVALLENACERRLLEEGNHGSEEYGKSIGGILEVLKCPNLCSGHGQCTDWGCACFPGYSSYDCSDAYDIAPEITELENAGFCDIQKQNCVTVRVFGQGFKESPYIKCEVTKLEYNGSEWVRGASVYTQTVFQDSSAVDCQLPTNSQHFETMDLMREKFFAKLQLKVSNDGYAFSNPKIMTIYDGVCQICELQENGSCIMKGNVCVINGLCYNEGDKNSTSSCLVCRPQISNSTWSFLENNQPPVIQELQGTLQVFYGEDFEYQFMAWDPEGSEIHFTLDSGPDGASISSEGLLTWKTESLTPQRFTVHLKDDCKAETIVTMEVTVKPCDCLNGGSCESDRKFPPGSGAYLCVCLPGFHGRLCEVDAGKNCEEDVDGCESWPCVPDLSIQSPSEERLLSRPSFTESPGTITNEFLNSTGTSHLSIKSVTTQMDNTKKATSHQTPAYEHADHILSTNLTPNESQVSAKSGALLSSNPSRSLGQIRDDIQGTVQTDVRRGNAQISKPFQGVTQYEFASLTTEENTILPESYGSTKISNCTESTCFLGVPCVPTINGHFKCGHCPIGYYGDGTNCRAFCRHSCGRNRQCVAPNICKCKPGYTGSNCQTAICHPVCKKHGKCIKPNICECPPGQDGATCDEERCRPPCQHGGTCLPGNLCTCAYGFVGPRCEILVCNKHCENGGKCVAPDICQCKSGWYGPTCSTALCEPVCLNGGSCYKPNTCLCPDGFFGAQCQNAVCHPPCKNGGHCVRNNVCTCRGGYTGKRCQKSICEPMCMNGGKCVGPNICSCASGWSGKQCNTPICLQKCMHGGECVAPSMCHCPSSWEGVQCEKPVCAQKCLHGGRCAFPGVCSCRPGYSGVKCEKKIQMKHP
SIO_010081: Vwde
subclass of: SO_0000673
so part of: Vwde
location: complement(join(8447681..8447695,8449152..8449255,8451731..8451826,8453339..8453434,8453528..8453623,8463165..8463260,8465043..8465138,8465728..8465823,8467177..8467272,8467356..8467451,8468860..8469423,8471397..8471450,8473624..8473756,8474886..8475136,8477046..8477160,8478967..8479071,8479177..8479332,8482914..8483050,8484529..8485463,8485606..8485814,8491578..8491851,8493278..8493351,8493777..8493994,8495574..8495712,8497594..8497683,8503062..8503309,8505691..8505756,8507179..8507410,8510811..8510989,8515771..8515840))
location: region:8447681-8515840:-1
so has part: feature:8515771-8515840:-1:exon
so has part: feature:8510811-8510989:-1:exon
so has part: feature:8507179-8507410:-1:exon
so has part: feature:8505691-8505756:-1:exon
so has part: feature:8503062-8503309:-1:exon
so has part: feature:8497594-8497683:-1:exon
so has part: feature:8495574-8495712:-1:exon
so has part: feature:8493777-8493994:-1:exon
so has part: feature:8493278-8493351:-1:exon
so has part: feature:8491578-8491851:-1:exon
so has part: feature:8485606-8485814:-1:exon
so has part: feature:8484529-8485463:-1:exon
so has part: feature:8482914-8483050:-1:exon
so has part: feature:8479177-8479332:-1:exon
so has part: feature:8478967-8479071:-1:exon
so has part: feature:8477046-8477160:-1:exon
so has part: feature:8474886-8475136:-1:exon
so has part: feature:8473624-8473756:-1:exon
so has part: feature:8471397-8471450:-1:exon
so has part: feature:8468860-8469423:-1:exon
so has part: feature:8467356-8467451:-1:exon
so has part: feature:8467177-8467272:-1:exon
so has part: feature:8465728-8465823:-1:exon
so has part: feature:8465043-8465138:-1:exon
so has part: feature:8463165-8463260:-1:exon
so has part: feature:8453528-8453623:-1:exon
so has part: feature:8453339-8453434:-1:exon
so has part: feature:8451731-8451826:-1:exon
so has part: feature:8449152-8449255:-1:exon
so has part: feature:8447681-8447695:-1:exon

XP_026643316.1
type: Protein
SIO_000068: ncbiprotein

position:8447681:-1
position: 8447681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8515771-8515840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8510811-8510989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8507179-8507410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8505691-8505756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8503062-8503309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8497594-8497683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8495574-8495712:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8493777-8493994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8493278-8493351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8491578-8491851:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8485606-8485814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8484529-8485463:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8482914-8483050:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8479177-8479332:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8478967-8479071:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8477046-8477160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8474886-8475136:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8473624-8473756:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8471397-8471450:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8468860-8469423:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8467356-8467451:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8467177-8467272:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8465728-8465823:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8465043-8465138:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8463165-8463260:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8453528-8453623:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8453339-8453434:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8451731-8451826:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8449152-8449255:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8447681-8447695:-1:exon

LOC101984036
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8527966..8528585)
location: region:8527966-8528585:-1
so has part: feature:8527966-8528585:-1:exon

101984036
type: Gene
SIO_000068: ncbigene

position:8527966:-1
position: 8527966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8528585:-1
position: 8528585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8527966-8528585:-1:exon

LOC101984036
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984036
subclass of: SO_0000673
so part of: LOC101984036
location: complement(8527966..8528254)
location: region:8527966-8528254:-1
so has part: feature:8527966-8528254:-1:exon

position:8528254:-1
position: 8528254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8527966-8528254:-1:exon

LOC101984036
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984036
subclass of: SO_0000673
so part of: LOC101984036
location: complement(8528290..8528585)
location: region:8528290-8528585:-1
so has part: feature:8528290-8528585:-1:exon

position:8528290:-1
position: 8528290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8528290-8528585:-1:exon

LOC101982233
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101982233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8539789..8540697
location: region:8539789-8540697:1
so has part: feature:8539789-8540697:1:exon
subclass of: SO_0000010

101982233
type: Gene
SIO_000068: ncbigene

position:8539789:1
position: 8539789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8540697:1
position: 8540697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8539789-8540697:1:exon

LOC101982233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101982233
product: taste receptor type 2 member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_005363792.1
SIO_010081: LOC101982233
subclass of: SO_0000673
so part of: LOC101982233
location: 8539789..8540697
location: region:8539789-8540697:1
so has part: feature:8539789-8540697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8539789-8540697:1:exon

LOC101982233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101982233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: taste receptor type 2 member 3-like
translation: MFFSFPAILHMVIMTTEFLIGTTVNGFLTIVNGYDLAKSGKLLILQILLICTGLSRLGLQMMLMTQSFFSVFFPFAYEENIYGSNMMFIWMFFSSIGLWFATCLSVFYCLKISGITKSWFLWLKFRISKFICWLLLGSLLASLGTATVSIEVGFPLIEDGYVLGNANLNISDRKLKRNNDLLLVNLALLLPLAVFVKCTSMLFVSLYKHTCRMQGRSQMSNARTEAHINALKTVTTFFCFFVTYFAAFMANMTFRIPYRSHEFFVVKEVMAAYPAGHSVIIILSNSKFKDLFRRMICLKKEE
SIO_010081: LOC101982233
subclass of: SO_0000673
so part of: LOC101982233
location: 8539789..8540697
location: region:8539789-8540697:1
so has part: feature:8539789-8540697:1:exon

XP_005363849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8539789-8540697:1:exon

LOC101984326
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984326
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8710902..8711913
location: region:8710902-8711913:1
so has part: feature:8710902-8711913:1:exon

101984326
type: Gene
SIO_000068: ncbigene

position:8710902:1
position: 8710902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8711913:1
position: 8711913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8710902-8711913:1:exon

LOC101984326
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984326
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984326
subclass of: SO_0000673
so part of: LOC101984326
location: 8710902..8711913
location: region:8710902-8711913:1
so has part: feature:8710902-8711913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8710902-8711913:1:exon

Tmem168
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmem168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8759975..8792946)
location: region:8759975-8792946:-1
so has part: feature:8759975-8792946:-1:exon
subclass of: SO_0000010

101984599
type: Gene
SIO_000068: ncbigene

position:8759975:-1
position: 8759975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8792946:-1
position: 8792946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8759975-8792946:-1:exon

Tmem168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmem168
product: transmembrane protein 168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005363724.3
SIO_010081: Tmem168
subclass of: SO_0000673
so part of: Tmem168
location: complement(join(8759975..8761993,8770380..8770654,8773741..8773883,8783593..8784842,8792148..8792946))
location: region:8759975-8792946:-1
so has part: feature:8792148-8792946:-1:exon
so has part: feature:8783593-8784842:-1:exon
so has part: feature:8773741-8773883:-1:exon
so has part: feature:8770380-8770654:-1:exon
so has part: feature:8759975-8761993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8792148-8792946:-1:exon

position:8792148:-1
position: 8792148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8783593-8784842:-1:exon

position:8783593:-1
position: 8783593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8784842:-1
position: 8784842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8773741-8773883:-1:exon

position:8773741:-1
position: 8773741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8773883:-1
position: 8773883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8770380-8770654:-1:exon

position:8770380:-1
position: 8770380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8770654:-1
position: 8770654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8759975-8761993:-1:exon

position:8761993:-1
position: 8761993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmem168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 168
translation: MCKSLRYCFSHCLHLAMTRLEEANREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKEESTKYLLLTSIVLRILCALVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSVILLVVALAMLIIDLRMKSFLAIPNLILFSVLLFFSSLEIPQNPIAFACFFICLITDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFIGMIELIFFILSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVYINHRADNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESLAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYVLYYSGHTHGSGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSTPWVKEVRKINDQYIAVQGAELAKTVDIEEADPPQLGDFTKDWVEYNCNPSNNICWAEKGRTVRALYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRVTYPLVHLANWLCGLNLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS
SIO_010081: Tmem168
subclass of: SO_0000673
so part of: Tmem168
location: complement(join(8761446..8761993,8770380..8770654,8773741..8773883,8783593..8784720))
location: region:8761446-8784720:-1
so has part: feature:8783593-8784720:-1:exon
so has part: feature:8773741-8773883:-1:exon
so has part: feature:8770380-8770654:-1:exon
so has part: feature:8761446-8761993:-1:exon

XP_005363781.1
type: Protein
SIO_000068: ncbiprotein

position:8761446:-1
position: 8761446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8784720:-1
position: 8784720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8783593-8784720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8773741-8773883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8770380-8770654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8761446-8761993:-1:exon

Bmt2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Bmt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8812918..8863566)
location: region:8812918-8863566:-1
so has part: feature:8812918-8863566:-1:exon
subclass of: SO_0000010

101985078
type: Gene
SIO_000068: ncbigene

position:8812918:-1
position: 8812918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8863566:-1
position: 8863566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8812918-8863566:-1:exon

Bmt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bmt2
product: base methyltransferase of 25S rRNA 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005363726.2
SIO_010081: Bmt2
subclass of: SO_0000673
so part of: Bmt2
location: complement(join(8812918..8816067,8818085..8818199,8828623..8828793,8851168..8851309,8863297..8863566))
location: region:8812918-8863566:-1
so has part: feature:8863297-8863566:-1:exon
so has part: feature:8851168-8851309:-1:exon
so has part: feature:8828623-8828793:-1:exon
so has part: feature:8818085-8818199:-1:exon
so has part: feature:8812918-8816067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8863297-8863566:-1:exon

position:8863297:-1
position: 8863297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8851168-8851309:-1:exon

position:8851168:-1
position: 8851168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8851309:-1
position: 8851309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8828623-8828793:-1:exon

position:8828623:-1
position: 8828623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8828793:-1
position: 8828793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8818085-8818199:-1:exon

position:8818085:-1
position: 8818085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8818199:-1
position: 8818199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8812918-8816067:-1:exon

position:8816067:-1
position: 8816067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bmt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bmt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosylmethionine sensor upstream of mTORC1
translation: MEPGSGGRGSARGQRPSSAAQPREQERKLEQEKLSGVVKSVHRRLRKKYREVGDFDKIWREHCEDAETLCEYAVAMKNLADNHWAKTCEGEGRIEWCCSICREYFQNGGKRKALEKDEKRAVLATKTTPALNVHESSKLEGRLTNLSFTSPEFITELLQASEKIRLLDVGSCFNPFLKFEEFLTVGIDIVPAVESVYKCDFLNLQLQQPLQLAQDAIDAFLKQLKNPIDSLPGELFHVVVFSLLLSYFPSPYQRWICCKKAHELLVLNGLLLIITPDSSHQNRHAMMMKSWKIAIESLGFKRFKYSKFSHMHLMAFRKTSLKTTSDLVSRNYPGMLYIPQDFNSVEDEEYSSPSCYVRSDIEDEQLAYGFTELPDAPYDSDSGESQASSIPFYELEDPILLLS
SIO_010081: Bmt2
subclass of: SO_0000673
so part of: Bmt2
location: complement(join(8815438..8816067,8818085..8818199,8828623..8828793,8851168..8851309,8863297..8863450))
location: region:8815438-8863450:-1
so has part: feature:8863297-8863450:-1:exon
so has part: feature:8851168-8851309:-1:exon
so has part: feature:8828623-8828793:-1:exon
so has part: feature:8818085-8818199:-1:exon
so has part: feature:8815438-8816067:-1:exon

XP_005363783.1
type: Protein
SIO_000068: ncbiprotein

position:8815438:-1
position: 8815438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8863450:-1
position: 8863450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition