Microtus ochrogaster isolate Prairie Vole_2 linkage group LG5, MicOch1.0, whole genome shotgun sequence.
type: Entry
definition: Microtus ochrogaster isolate Prairie Vole_2 linkage group LG5, MicOch1.0, whole genome shotgun sequence.
sequence version: NC_022031.1
sequence date: 2018-10-15
sequence: sequence
division: CON
label: NC_022031.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210839
dblink: SAMN00727831
keyword: WGS
keyword: RefSeq
source: Microtus ochrogaster (prairie vole)
organism: Microtus ochrogaster
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Arvicolinae; Microtus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001694.1.\nAssembly name: MicOch1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/12/07. The original whole-genome shotgun project has the\naccession AHZW00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: allpaths v. R41985 HAPLOIDIFY=True\n SPRS_WRITE_SEPS=True\nAssembly Name :: MicOch1.0\nGenome Coverage :: 94x\nSequencing Technology :: Illumina Hi-Seq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Microtus ochrogaster Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 66490022
topology: linear
so has quality: SO_0000987
location: 1..66490022
location: region:1-66490022:1
RO_0002162: 79684

NC_022031
type: RefSeq
SIO_000068: refseq

PRJNA210839
type: BioProject
SIO_000068: bioproject

SAMN00727831
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66490022:1
position: 66490022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-66490022:1:source
so part of: sequence
organism: Microtus ochrogaster
mol type: genomic DNA
isolate: Prairie Vole_2
sex: female
linkage group: LG5

79684
type: Taxonomy
SIO_000068: taxonomy

Stmn2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Stmn2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 81196..133975
location: region:81196-133975:1
so has part: feature:81196-133975:1:exon
subclass of: SO_0000010

101996812
type: Gene
SIO_000068: ncbigene

position:81196:1
position: 81196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133975:1
position: 133975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81196-133975:1:exon

Stmn2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Stmn2
product: stathmin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005361791.2
SIO_010081: Stmn2
subclass of: SO_0000673
so part of: Stmn2
location: join(81196..81441,112288..112383,115933..116105,125103..125294,132649..133975)
location: region:81196-133975:1
so has part: feature:81196-81441:1:exon
so has part: feature:112288-112383:1:exon
so has part: feature:115933-116105:1:exon
so has part: feature:125103-125294:1:exon
so has part: feature:132649-133975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81196-81441:1:exon

position:81441:1
position: 81441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112288-112383:1:exon

position:112288:1
position: 112288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112383:1
position: 112383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115933-116105:1:exon

position:115933:1
position: 115933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116105:1
position: 116105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:125103-125294:1:exon

position:125103:1
position: 125103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125294:1
position: 125294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132649-133975:1:exon

position:132649:1
position: 132649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Stmn2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Stmn2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stathmin-2
translation: MAKTAMAYKEKMKELSMLSLICSCFYPEPRNINIYTYDDMEVKQINKRASGQAFELILKPPSPISEAPRTLASPKKKDLSLEEIQKKLEAAEERRKSQEAQVLKQLAEKREHEREVLQKALEENNNFSKMAEEKLILKMEQIKENREANLAAIIERLQEKERHAAEVRRNKELQVELSG
SIO_010081: Stmn2
subclass of: SO_0000673
so part of: Stmn2
location: join(81423..81441,112288..112383,115933..116105,125103..125294,132649..132708)
location: region:81423-132708:1
so has part: feature:81423-81441:1:exon
so has part: feature:112288-112383:1:exon
so has part: feature:115933-116105:1:exon
so has part: feature:125103-125294:1:exon
so has part: feature:132649-132708:1:exon

XP_005361848.1
type: Protein
SIO_000068: ncbiprotein

position:81423:1
position: 81423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132708:1
position: 132708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81423-81441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112288-112383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115933-116105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125103-125294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132649-132708:1:exon

Hey1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hey1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236495..240298)
location: region:236495-240298:-1
so has part: feature:236495-240298:-1:exon
subclass of: SO_0000010

101997093
type: Gene
SIO_000068: ncbigene

position:236495:-1
position: 236495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240298:-1
position: 240298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236495-240298:-1:exon

Hey1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hey1
product: hes related family bHLH transcription factor with YRPW motif 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005361792.2
SIO_010081: Hey1
subclass of: SO_0000673
so part of: Hey1
location: complement(join(236495..238211,239072..239153,239426..239509,239641..239716,239915..240298))
location: region:236495-240298:-1
so has part: feature:239915-240298:-1:exon
so has part: feature:239641-239716:-1:exon
so has part: feature:239426-239509:-1:exon
so has part: feature:239072-239153:-1:exon
so has part: feature:236495-238211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239915-240298:-1:exon

position:239915:-1
position: 239915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239641-239716:-1:exon

position:239641:-1
position: 239641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239716:-1
position: 239716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239426-239509:-1:exon

position:239426:-1
position: 239426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239509:-1
position: 239509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239072-239153:-1:exon

position:239072:-1
position: 239072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239153:-1
position: 239153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:236495-238211:-1:exon

position:238211:-1
position: 238211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hey1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hey1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hairy/enhancer-of-split related with YRPW motif protein 1
translation: MKRAHPDYSSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQVLARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAASGAHAGLGHIPWGSAFGHHPHVAHPLLLPQNGHGNAGTTASSTEPHHQGRLASAHPEAPALRAPPSGSLGPVLPVVTSASKLSPPLLSSVASLSAFPFSFSSFHLLSPTTPTQAANLGKPYRPWGTEIGAF
SIO_010081: Hey1
subclass of: SO_0000673
so part of: Hey1
location: complement(join(237643..238211,239072..239153,239426..239509,239641..239716,239915..240003))
location: region:237643-240003:-1
so has part: feature:239915-240003:-1:exon
so has part: feature:239641-239716:-1:exon
so has part: feature:239426-239509:-1:exon
so has part: feature:239072-239153:-1:exon
so has part: feature:237643-238211:-1:exon

XP_005361849.1
type: Protein
SIO_000068: ncbiprotein

position:237643:-1
position: 237643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240003:-1
position: 240003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239915-240003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239641-239716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239426-239509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239072-239153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237643-238211:-1:exon

Mrps28
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mrps28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(376895..501760)
location: region:376895-501760:-1
so has part: feature:376895-501760:-1:exon
subclass of: SO_0000010

101997573
type: Gene
SIO_000068: ncbigene

position:376895:-1
position: 376895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501760:-1
position: 501760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376895-501760:-1:exon

Mrps28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mrps28
product: mitochondrial ribosomal protein S28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005361794.2
SIO_010081: Mrps28
subclass of: SO_0000673
so part of: Mrps28
location: complement(join(376895..377164,473274..473455,501532..501760))
location: region:376895-501760:-1
so has part: feature:501532-501760:-1:exon
so has part: feature:473274-473455:-1:exon
so has part: feature:376895-377164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501532-501760:-1:exon

position:501532:-1
position: 501532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473274-473455:-1:exon

position:473274:-1
position: 473274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473455:-1
position: 473455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376895-377164:-1:exon

position:377164:-1
position: 377164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mrps28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mrps28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S28, mitochondrial
translation: MAALCGYHARAARSRFLRALLFSKPFRNASTESGSESVVDDSSAPRARSGGFASALERLSELQRKAELGPESPKNVESFASMLRHSPLTQMGPAKDKLVIGRIFHIVEDDLYIDFGGKFHCVCKRPDVDGEKYQRGTRVRLRLLDLELTSRFLGATTDTTILEADAVLLGLQESRDSRSREEQLNK
SIO_010081: Mrps28
subclass of: SO_0000673
so part of: Mrps28
location: complement(join(376996..377164,473274..473455,501532..501741))
location: region:376996-501741:-1
so has part: feature:501532-501741:-1:exon
so has part: feature:473274-473455:-1:exon
so has part: feature:376996-377164:-1:exon

XP_005361851.1
type: Protein
SIO_000068: ncbiprotein

position:376996:-1
position: 376996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501741:-1
position: 501741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501532-501741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473274-473455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376996-377164:-1:exon

Tpd52
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tpd52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(508777..605787)
location: region:508777-605787:-1
so has part: feature:508777-605787:-1:exon
subclass of: SO_0000010

101998062
type: Gene
SIO_000068: ncbigene

position:508777:-1
position: 508777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605787:-1
position: 605787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508777-605787:-1:exon

Tpd52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tpd52
product: tumor protein D52, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005361802.3
SIO_010081: Tpd52
subclass of: SO_0000673
so part of: Tpd52
location: complement(join(508777..510289,514653..514701,524264..524365,525309..525457,533685..533800,605372..605787))
location: region:508777-605787:-1
so has part: feature:605372-605787:-1:exon
so has part: feature:533685-533800:-1:exon
so has part: feature:525309-525457:-1:exon
so has part: feature:524264-524365:-1:exon
so has part: feature:514653-514701:-1:exon
so has part: feature:508777-510289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605372-605787:-1:exon

position:605372:-1
position: 605372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533685-533800:-1:exon

position:533685:-1
position: 533685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533800:-1
position: 533800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:525309-525457:-1:exon

position:525309:-1
position: 525309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525457:-1
position: 525457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:524264-524365:-1:exon

position:524264:-1
position: 524264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524365:-1
position: 524365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:514653-514701:-1:exon

position:514653:-1
position: 514653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514701:-1
position: 514701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:508777-510289:-1:exon

position:510289:-1
position: 510289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tpd52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tpd52
product: tumor protein D52, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005361801.3
SIO_010081: Tpd52
subclass of: SO_0000673
so part of: Tpd52
location: complement(join(508777..510289,514653..514701,515981..516022,524264..524365,525309..525457,533685..533800,605372..605787))
location: region:508777-605787:-1
so has part: feature:605372-605787:-1:exon
so has part: feature:533685-533800:-1:exon
so has part: feature:525309-525457:-1:exon
so has part: feature:524264-524365:-1:exon
so has part: feature:515981-516022:-1:exon
so has part: feature:514653-514701:-1:exon
so has part: feature:508777-510289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605372-605787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533685-533800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525309-525457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524264-524365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515981-516022:-1:exon

position:515981:-1
position: 515981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516022:-1
position: 516022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:514653-514701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508777-510289:-1:exon

Tpd52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tpd52
product: tumor protein D52, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005361800.3
SIO_010081: Tpd52
subclass of: SO_0000673
so part of: Tpd52
location: complement(join(508777..510289,514653..514701,515981..516022,523183..523209,524264..524365,525309..525457,533685..533800,605372..605787))
location: region:508777-605787:-1
so has part: feature:605372-605787:-1:exon
so has part: feature:533685-533800:-1:exon
so has part: feature:525309-525457:-1:exon
so has part: feature:524264-524365:-1:exon
so has part: feature:523183-523209:-1:exon
so has part: feature:515981-516022:-1:exon
so has part: feature:514653-514701:-1:exon
so has part: feature:508777-510289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605372-605787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533685-533800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525309-525457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524264-524365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523183-523209:-1:exon

position:523183:-1
position: 523183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523209:-1
position: 523209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:515981-516022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514653-514701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:508777-510289:-1:exon

Tpd52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tpd52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D52 isoform X3
translation: MDRGEQGLLKTEPVAEEGEDAVAMLSAPENLSEEEQDELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGISSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEKVENLKSKVGGAKPAGGDFGEVLNSTANATSAEATEPPPAQTEAMP
SIO_010081: Tpd52
subclass of: SO_0000673
so part of: Tpd52
location: complement(join(510167..510289,514653..514701,524264..524365,525309..525457,533685..533800,605372..605390))
location: region:510167-605390:-1
so has part: feature:605372-605390:-1:exon
so has part: feature:533685-533800:-1:exon
so has part: feature:525309-525457:-1:exon
so has part: feature:524264-524365:-1:exon
so has part: feature:514653-514701:-1:exon
so has part: feature:510167-510289:-1:exon

XP_005361859.1
type: Protein
SIO_000068: ncbiprotein

position:510167:-1
position: 510167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605390:-1
position: 605390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605372-605390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533685-533800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525309-525457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524264-524365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514653-514701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510167-510289:-1:exon

Tpd52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tpd52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D52 isoform X2
translation: MDRGEQGLLKTEPVAEEGEDAVAMLSAPENLSEEEQDELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGISSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVNIRSIQHSISMPAMRNSPTFKSFEEKVENLKSKVGGAKPAGGDFGEVLNSTANATSAEATEPPPAQTEAMP
SIO_010081: Tpd52
subclass of: SO_0000673
so part of: Tpd52
location: complement(join(510167..510289,514653..514701,515981..516022,524264..524365,525309..525457,533685..533800,605372..605390))
location: region:510167-605390:-1
so has part: feature:605372-605390:-1:exon
so has part: feature:533685-533800:-1:exon
so has part: feature:525309-525457:-1:exon
so has part: feature:524264-524365:-1:exon
so has part: feature:515981-516022:-1:exon
so has part: feature:514653-514701:-1:exon
so has part: feature:510167-510289:-1:exon

XP_005361858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605372-605390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533685-533800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525309-525457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524264-524365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515981-516022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514653-514701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:510167-510289:-1:exon

Tpd52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tpd52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D52 isoform X1
translation: MDRGEQGLLKTEPVAEEGEDAVAMLSAPENLSEEEQDELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGISSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHSFSIRSIQHSISMPAMRNSPTFKSFEEKVENLKSKVGGAKPAGGDFGEVLNSTANATSAEATEPPPAQTEAMP
SIO_010081: Tpd52
subclass of: SO_0000673
so part of: Tpd52
location: complement(join(510167..510289,514653..514701,515981..516022,523183..523209,524264..524365,525309..525457,533685..533800,605372..605390))
location: region:510167-605390:-1
so has part: feature:605372-605390:-1:exon
so has part: feature:533685-533800:-1:exon
so has part: feature:525309-525457:-1:exon
so has part: feature:524264-524365:-1:exon
so has part: feature:523183-523209:-1:exon
so has part: feature:515981-516022:-1:exon
so has part: feature:514653-514701:-1:exon
so has part: feature:510167-510289:-1:exon

XP_005361857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605372-605390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533685-533800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525309-525457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524264-524365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523183-523209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:515981-516022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514653-514701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:510167-510289:-1:exon

LOC101987063
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101987063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 662134..678538
location: region:662134-678538:1
so has part: feature:662134-678538:1:exon

101987063
type: Gene
SIO_000068: ncbigene

position:662134:1
position: 662134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678538:1
position: 678538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662134-678538:1:exon

LOC101987063
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101987063
subclass of: SO_0000673
so part of: LOC101987063
location: 662134..662208
location: region:662134-662208:1
so has part: feature:662134-662208:1:exon

position:662208:1
position: 662208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662134-662208:1:exon

LOC113457774
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457774
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 670725..670831
location: region:670725-670831:1
so has part: feature:670725-670831:1:exon
subclass of: SO_0000623

113457774
type: Gene
SIO_000068: ncbigene

position:670725:1
position: 670725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670831:1
position: 670831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670725-670831:1:exon

LOC113457774
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457774
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378271.1
SIO_010081: LOC113457774
subclass of: SO_0000673
so part of: LOC113457774
location: 670725..670831
location: region:670725-670831:1
so has part: feature:670725-670831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670725-670831:1:exon

LOC101987063
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101987063
subclass of: SO_0000673
so part of: LOC101987063
location: 674042..674667
location: region:674042-674667:1
so has part: feature:674042-674667:1:exon

position:674042:1
position: 674042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674667:1
position: 674667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674042-674667:1:exon

LOC101987063
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101987063
subclass of: SO_0000673
so part of: LOC101987063
location: 678500..678538
location: region:678500-678538:1
so has part: feature:678500-678538:1:exon

position:678500:1
position: 678500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678500-678538:1:exon

LOC113457728
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(863044..865758)
location: region:863044-865758:-1
so has part: feature:863044-865758:-1:exon
subclass of: SO_0000011

113457728
type: Gene
SIO_000068: ncbigene

position:863044:-1
position: 863044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865758:-1
position: 865758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863044-865758:-1:exon

LOC113457728
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457728
product: uncharacterized LOC113457728, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003378235.1
SIO_010081: LOC113457728
subclass of: SO_0000673
so part of: LOC113457728
location: complement(join(863044..863275,863623..864458,864557..864887,865295..865758))
location: region:863044-865758:-1
so has part: feature:865295-865758:-1:exon
so has part: feature:864557-864887:-1:exon
so has part: feature:863623-864458:-1:exon
so has part: feature:863044-863275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865295-865758:-1:exon

position:865295:-1
position: 865295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864557-864887:-1:exon

position:864557:-1
position: 864557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864887:-1
position: 864887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:863623-864458:-1:exon

position:863623:-1
position: 863623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864458:-1
position: 864458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863044-863275:-1:exon

position:863275:-1
position: 863275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113457728
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457728
product: uncharacterized LOC113457728, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_003378234.1
SIO_010081: LOC113457728
subclass of: SO_0000673
so part of: LOC113457728
location: complement(join(863298..864458,864557..864887,865295..865758))
location: region:863298-865758:-1
so has part: feature:865295-865758:-1:exon
so has part: feature:864557-864887:-1:exon
so has part: feature:863298-864458:-1:exon

position:863298:-1
position: 863298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865295-865758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864557-864887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863298-864458:-1:exon

Zbtb10
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Zbtb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 866533..899058
location: region:866533-899058:1
so has part: feature:866533-899058:1:exon
subclass of: SO_0000010

101999457
type: Gene
SIO_000068: ncbigene

position:866533:1
position: 866533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899058:1
position: 899058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866533-899058:1:exon

Zbtb10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zbtb10
product: zinc finger and BTB domain containing 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026786776.1
SIO_010081: Zbtb10
subclass of: SO_0000673
so part of: Zbtb10
location: join(866533..867536,880680..881562,892231..892329,896726..896929,897089..897261,897503..899058)
location: region:866533-899058:1
so has part: feature:866533-867536:1:exon
so has part: feature:880680-881562:1:exon
so has part: feature:892231-892329:1:exon
so has part: feature:896726-896929:1:exon
so has part: feature:897089-897261:1:exon
so has part: feature:897503-899058:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866533-867536:1:exon

position:867536:1
position: 867536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880680-881562:1:exon

position:880680:1
position: 880680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881562:1
position: 881562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892231-892329:1:exon

position:892231:1
position: 892231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892329:1
position: 892329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:896726-896929:1:exon

position:896726:1
position: 896726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896929:1
position: 896929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:897089-897261:1:exon

position:897089:1
position: 897089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897261:1
position: 897261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:897503-899058:1:exon

position:897503:1
position: 897503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Zbtb10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zbtb10
product: zinc finger and BTB domain containing 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005361803.2
SIO_010081: Zbtb10
subclass of: SO_0000673
so part of: Zbtb10
location: join(866533..867536,880680..881562,892231..892329,896726..896902,897089..897261,897503..899058)
location: region:866533-899058:1
so has part: feature:866533-867536:1:exon
so has part: feature:880680-881562:1:exon
so has part: feature:892231-892329:1:exon
so has part: feature:896726-896902:1:exon
so has part: feature:897089-897261:1:exon
so has part: feature:897503-899058:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866533-867536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880680-881562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892231-892329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896726-896902:1:exon

position:896902:1
position: 896902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:897089-897261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897503-899058:1:exon

Zbtb10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zbtb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 10 isoform X1
translation: MSFSEMNRRTLAFRGGGLITGGGGGGGPTNNNAGGEASAWPPQPQPRQPAPPAPQQPNGRGADEEMDSEGLEPQDSEASAGAAAAEDAKELLLPQDAGGPASLGGGAGGPLLAERNRRTLAFRGGGAGGLGNNGSSRGRPETSAWPLRHFNGRGPAAVELELDALEGKELMQDGASLSDSTEDEEEGASPGDGSGAEGGSCGSSRRSGGDGGDDAEGSGVGAGDGEAVQHFPLARPKSLLQKLQCSFQTSWLKDFPWLRYSRDTGLMFCGWCHKPPEDGGGADLSPVGHDELSRGTRNYKKTLLLRHHVSTEHKLHEANAQESEIPSEEGYCDFNSRPNENSYCYQLLRQLDEQRKKDILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCVSNKESPNQNNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDALNISIKSEAPESVVVDYNNRKPVNRDGLTSSRDQKIASFWATRNLTNLASSIKIENDACNVDEGQIENYQMNDSNWVQDASPELAENESQVKTKVFIWNNVSSQETGKARRKNQTTKRFVYNIPPNNETNVEDCSVMQPPVAYPEENNALLIKEEPDLDGALLSGSDGDRTVNSNLLAEACSGQDAGDAGASHDFKYGVMPSTSNDFKYGLLPSTSNDFKYGLLPGASNDFKYGLLPESWPKQETWENGKYYQQIQNGDSSLIMNKLKCPHCTYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKCMVCKKIFMLAASVGIRHGSRRYGVCMDCADKSQPGGQEGVDQGQDAEFPRDEEYEENEGGEPDEELAENGEDQNDTSRWDESGDVCMSLDA
SIO_010081: Zbtb10
subclass of: SO_0000673
so part of: Zbtb10
location: join(866574..867536,880680..881562,892231..892329,896726..896929,897089..897261,897503..897808)
location: region:866574-897808:1
so has part: feature:866574-867536:1:exon
so has part: feature:880680-881562:1:exon
so has part: feature:892231-892329:1:exon
so has part: feature:896726-896929:1:exon
so has part: feature:897089-897261:1:exon
so has part: feature:897503-897808:1:exon

XP_026642577.1
type: Protein
SIO_000068: ncbiprotein

position:866574:1
position: 866574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897808:1
position: 897808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866574-867536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880680-881562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892231-892329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896726-896929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897089-897261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897503-897808:1:exon

Zbtb10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zbtb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 10 isoform X2
translation: MSFSEMNRRTLAFRGGGLITGGGGGGGPTNNNAGGEASAWPPQPQPRQPAPPAPQQPNGRGADEEMDSEGLEPQDSEASAGAAAAEDAKELLLPQDAGGPASLGGGAGGPLLAERNRRTLAFRGGGAGGLGNNGSSRGRPETSAWPLRHFNGRGPAAVELELDALEGKELMQDGASLSDSTEDEEEGASPGDGSGAEGGSCGSSRRSGGDGGDDAEGSGVGAGDGEAVQHFPLARPKSLLQKLQCSFQTSWLKDFPWLRYSRDTGLMFCGWCHKPPEDGGGADLSPVGHDELSRGTRNYKKTLLLRHHVSTEHKLHEANAQESEIPSEEGYCDFNSRPNENSYCYQLLRQLDEQRKKDILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCVSNKESPNQNNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDALNISIKSEAPESVVVDYNNRKPVNRDGLTSSRDQKIASFWATRNLTNLASSIKIENDACNVDEGQIENYQMNDSNWVQDASPELAENESQVKTKVFIWNNVSSQETGKARRKNQTTKRFVYNIPPNNETNVEDCSVMQPPVAYPEENNALLIKEEPDLDGALLSGSDGDRTVNSNLLAEACSGQDAGDAGASHDFKYGVMPSTSNDFKYGLLPSTSNDFKYGLLPGASNDFKYGLLPESWPKQETWENGDSSLIMNKLKCPHCTYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKCMVCKKIFMLAASVGIRHGSRRYGVCMDCADKSQPGGQEGVDQGQDAEFPRDEEYEENEGGEPDEELAENGEDQNDTSRWDESGDVCMSLDA
SIO_010081: Zbtb10
subclass of: SO_0000673
so part of: Zbtb10
location: join(866574..867536,880680..881562,892231..892329,896726..896902,897089..897261,897503..897808)
location: region:866574-897808:1
so has part: feature:866574-867536:1:exon
so has part: feature:880680-881562:1:exon
so has part: feature:892231-892329:1:exon
so has part: feature:896726-896902:1:exon
so has part: feature:897089-897261:1:exon
so has part: feature:897503-897808:1:exon

XP_005361860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:866574-867536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880680-881562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892231-892329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896726-896902:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897089-897261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897503-897808:1:exon

Znf704
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Znf704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1049014..1248929)
location: region:1049014-1248929:-1
so has part: feature:1049014-1248929:-1:exon
subclass of: SO_0000010

101999910
type: Gene
SIO_000068: ncbigene

position:1049014:-1
position: 1049014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248929:-1
position: 1248929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049014-1248929:-1:exon

Znf704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Znf704
product: zinc finger protein 704
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005361805.3
SIO_010081: Znf704
subclass of: SO_0000673
so part of: Znf704
location: complement(join(1049014..1049605,1050523..1050620,1057503..1057604,1060677..1060935,1065778..1065878,1077588..1077814,1081148..1081251,1185689..1185927,1248681..1248929))
location: region:1049014-1248929:-1
so has part: feature:1248681-1248929:-1:exon
so has part: feature:1185689-1185927:-1:exon
so has part: feature:1081148-1081251:-1:exon
so has part: feature:1077588-1077814:-1:exon
so has part: feature:1065778-1065878:-1:exon
so has part: feature:1060677-1060935:-1:exon
so has part: feature:1057503-1057604:-1:exon
so has part: feature:1050523-1050620:-1:exon
so has part: feature:1049014-1049605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248681-1248929:-1:exon

position:1248681:-1
position: 1248681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185689-1185927:-1:exon

position:1185689:-1
position: 1185689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185927:-1
position: 1185927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081148-1081251:-1:exon

position:1081148:-1
position: 1081148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081251:-1
position: 1081251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1077588-1077814:-1:exon

position:1077588:-1
position: 1077588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077814:-1
position: 1077814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1065778-1065878:-1:exon

position:1065778:-1
position: 1065778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065878:-1
position: 1065878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1060677-1060935:-1:exon

position:1060677:-1
position: 1060677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060935:-1
position: 1060935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1057503-1057604:-1:exon

position:1057503:-1
position: 1057503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057604:-1
position: 1057604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1050523-1050620:-1:exon

position:1050523:-1
position: 1050523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050620:-1
position: 1050620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1049014-1049605:-1:exon

position:1049605:-1
position: 1049605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Znf704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Znf704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 704
translation: MTFTFQPEDLRRESSKKTSHHLFPLAMEEDVKAADTRKANRILDQEKENTRSICLLEQKRKVVSSNIDVPPARKSSEELDMDKVTAAMVLTSLSTSPLVRSPPVRPNEGLSGSWKEGAPSSSSSSGYWSWSAPSDQSNPSTPSPPLSADSFKPFRSPAPPDDGIDEAEASNLLFDEPIPRKRKNSMKVMFKCLWKNCGKVLNTAAGIQKHIRAIHLGRVGESDYSDGEEDFYYTEIKLNTDSMSEGLAPVSPSQSLTSPPTFPVPDCSRTEAPCAKTDPKPMTPLSRSAPTTLYLVRTDHAYQATPPVTIPGSKFTPNGSSFSISWQSPPVTFTGIPVSPTHPHPVGSGEQRQHAHTVLSSPPRGTVSLRKPRGEGKKCRKVYGMENRDMWCTACRWKKACQRFID
SIO_010081: Znf704
subclass of: SO_0000673
so part of: Znf704
location: complement(join(1049494..1049605,1050523..1050620,1057503..1057604,1060677..1060935,1065778..1065878,1077588..1077814,1081148..1081251,1185689..1185906))
location: region:1049494-1185906:-1
so has part: feature:1185689-1185906:-1:exon
so has part: feature:1081148-1081251:-1:exon
so has part: feature:1077588-1077814:-1:exon
so has part: feature:1065778-1065878:-1:exon
so has part: feature:1060677-1060935:-1:exon
so has part: feature:1057503-1057604:-1:exon
so has part: feature:1050523-1050620:-1:exon
so has part: feature:1049494-1049605:-1:exon

XP_005361862.1
type: Protein
SIO_000068: ncbiprotein

position:1049494:-1
position: 1049494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185906:-1
position: 1185906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185689-1185906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081148-1081251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077588-1077814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065778-1065878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1060677-1060935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1057503-1057604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1050523-1050620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1049494-1049605:-1:exon

Pag1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pag1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1341819..1501072)
location: region:1341819-1501072:-1
so has part: feature:1341819-1501072:-1:exon
subclass of: SO_0000010

102000185
type: Gene
SIO_000068: ncbigene

position:1341819:-1
position: 1341819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501072:-1
position: 1501072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341819-1501072:-1:exon

Pag1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pag1
product: phosphoprotein membrane anchor with glycosphingolipid microdomains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026786694.1
SIO_010081: Pag1
subclass of: SO_0000673
so part of: Pag1
location: complement(join(1341819..1349068,1350617..1350676,1354218..1354804,1357478..1357574,1360591..1360642,1362303..1362507,1434592..1434646,1500688..1501072))
location: region:1341819-1501072:-1
so has part: feature:1500688-1501072:-1:exon
so has part: feature:1434592-1434646:-1:exon
so has part: feature:1362303-1362507:-1:exon
so has part: feature:1360591-1360642:-1:exon
so has part: feature:1357478-1357574:-1:exon
so has part: feature:1354218-1354804:-1:exon
so has part: feature:1350617-1350676:-1:exon
so has part: feature:1341819-1349068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500688-1501072:-1:exon

position:1500688:-1
position: 1500688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1434592-1434646:-1:exon

position:1434592:-1
position: 1434592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434646:-1
position: 1434646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1362303-1362507:-1:exon

position:1362303:-1
position: 1362303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362507:-1
position: 1362507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1360591-1360642:-1:exon

position:1360591:-1
position: 1360591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360642:-1
position: 1360642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357478-1357574:-1:exon

position:1357478:-1
position: 1357478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357574:-1
position: 1357574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1354218-1354804:-1:exon

position:1354218:-1
position: 1354218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354804:-1
position: 1354804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1350617-1350676:-1:exon

position:1350617:-1
position: 1350617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350676:-1
position: 1350676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1341819-1349068:-1:exon

position:1349068:-1
position: 1349068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pag1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pag1
product: phosphoprotein membrane anchor with glycosphingolipid microdomains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005361806.2
SIO_010081: Pag1
subclass of: SO_0000673
so part of: Pag1
location: complement(join(1341819..1349068,1350617..1350676,1354218..1354804,1357478..1357574,1360591..1360642,1362303..1362507,1398994..1399087,1434592..1434646,1500688..1501072))
location: region:1341819-1501072:-1
so has part: feature:1500688-1501072:-1:exon
so has part: feature:1434592-1434646:-1:exon
so has part: feature:1398994-1399087:-1:exon
so has part: feature:1362303-1362507:-1:exon
so has part: feature:1360591-1360642:-1:exon
so has part: feature:1357478-1357574:-1:exon
so has part: feature:1354218-1354804:-1:exon
so has part: feature:1350617-1350676:-1:exon
so has part: feature:1341819-1349068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500688-1501072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434592-1434646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398994-1399087:-1:exon

position:1398994:-1
position: 1398994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399087:-1
position: 1399087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1362303-1362507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1360591-1360642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357478-1357574:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354218-1354804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1350617-1350676:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1341819-1349068:-1:exon

Pag1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Pag1
product: phosphoprotein membrane anchor with glycosphingolipid microdomains 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003378244.1
SIO_010081: Pag1
so part of: Pag1
location: complement(join(1344538..1344771,1346395..1349068,1350617..1350676,1354218..1354804,1357478..1357574,1360591..1360642,1362303..1362507,1398994..1399087,1434592..1434646,1500688..1501072))
location: region:1344538-1501072:-1
so has part: feature:1500688-1501072:-1:exon
so has part: feature:1434592-1434646:-1:exon
so has part: feature:1398994-1399087:-1:exon
so has part: feature:1362303-1362507:-1:exon
so has part: feature:1360591-1360642:-1:exon
so has part: feature:1357478-1357574:-1:exon
so has part: feature:1354218-1354804:-1:exon
so has part: feature:1350617-1350676:-1:exon
so has part: feature:1346395-1349068:-1:exon
so has part: feature:1344538-1344771:-1:exon

position:1344538:-1
position: 1344538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500688-1501072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434592-1434646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398994-1399087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1362303-1362507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1360591-1360642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357478-1357574:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354218-1354804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1350617-1350676:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1346395-1349068:-1:exon

position:1346395:-1
position: 1346395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1344538-1344771:-1:exon

position:1344771:-1
position: 1344771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pag1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pag1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoprotein associated with glycosphingolipid-enriched microdomains 1
translation: MGPAGSTLSAGPLQMQMVLWGSLAAVAMFFLLTFLILLCSSCDREKKPKQHSGDHENLMNVPSDKEMFSHSATSLTTDALASSEQNGVLTNGDILSEDSTLTCMQHYEEVQTSASDLLDSQDSTGKPKSHQSRELPRIPPENAVDAMLTARVVEGDSGPGMEGPYEVLKDSSSQENMVEDCLYETVKEIKEVADKGQAGKSKSTSALKELQGAPAEGKPDFAEYASVDRNKKCRQSVNAESILGASSDPEEEAPPPVPVKLLDENANLPEKGEAEAEEQAPEGTSGHNKRFSSLSYKSREEDPNLTEEEISAMYSSVNKLGQSAHKPGPAPKGPELTCQSMQGPPQRSSSSCNDLYATVKDFEKSPNSLCTPPPARSPSEEPEPDYEAIHNLNREEEKVPLETNGHLVPKENDYESIGDLQHCRDITRL
SIO_010081: Pag1
subclass of: SO_0000673
so part of: Pag1
location: complement(join(1348706..1349068,1350617..1350676,1354218..1354804,1357478..1357574,1360591..1360642,1362303..1362433))
location: region:1348706-1362433:-1
so has part: feature:1362303-1362433:-1:exon
so has part: feature:1360591-1360642:-1:exon
so has part: feature:1357478-1357574:-1:exon
so has part: feature:1354218-1354804:-1:exon
so has part: feature:1350617-1350676:-1:exon
so has part: feature:1348706-1349068:-1:exon

XP_026642495.1
type: Protein
SIO_000068: ncbiprotein

position:1348706:-1
position: 1348706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362433:-1
position: 1362433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362303-1362433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1360591-1360642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357478-1357574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354218-1354804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1350617-1350676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1348706-1349068:-1:exon

Pag1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pag1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoprotein associated with glycosphingolipid-enriched microdomains 1
translation: MGPAGSTLSAGPLQMQMVLWGSLAAVAMFFLLTFLILLCSSCDREKKPKQHSGDHENLMNVPSDKEMFSHSATSLTTDALASSEQNGVLTNGDILSEDSTLTCMQHYEEVQTSASDLLDSQDSTGKPKSHQSRELPRIPPENAVDAMLTARVVEGDSGPGMEGPYEVLKDSSSQENMVEDCLYETVKEIKEVADKGQAGKSKSTSALKELQGAPAEGKPDFAEYASVDRNKKCRQSVNAESILGASSDPEEEAPPPVPVKLLDENANLPEKGEAEAEEQAPEGTSGHNKRFSSLSYKSREEDPNLTEEEISAMYSSVNKLGQSAHKPGPAPKGPELTCQSMQGPPQRSSSSCNDLYATVKDFEKSPNSLCTPPPARSPSEEPEPDYEAIHNLNREEEKVPLETNGHLVPKENDYESIGDLQHCRDITRL
SIO_010081: Pag1
subclass of: SO_0000673
so part of: Pag1
location: complement(join(1348706..1349068,1350617..1350676,1354218..1354804,1357478..1357574,1360591..1360642,1362303..1362433))
location: region:1348706-1362433:-1
so has part: feature:1362303-1362433:-1:exon
so has part: feature:1360591-1360642:-1:exon
so has part: feature:1357478-1357574:-1:exon
so has part: feature:1354218-1354804:-1:exon
so has part: feature:1350617-1350676:-1:exon
so has part: feature:1348706-1349068:-1:exon

XP_005361863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1362303-1362433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1360591-1360642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357478-1357574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354218-1354804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1350617-1350676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1348706-1349068:-1:exon

LOC102000446
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102000446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1650554..1654779
location: region:1650554-1654779:1
so has part: feature:1650554-1654779:1:exon
subclass of: SO_0000010

102000446
type: Gene
SIO_000068: ncbigene

position:1650554:1
position: 1650554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654779:1
position: 1654779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650554-1654779:1:exon

LOC102000446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC102000446
product: fatty acid-binding protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013351756.2
SIO_010081: LOC102000446
subclass of: SO_0000673
so part of: LOC102000446
location: join(1650554..1650941,1653862..1653963,1654515..1654555)
location: region:1650554-1654555:1
so has part: feature:1650554-1650941:1:exon
so has part: feature:1653862-1653963:1:exon
so has part: feature:1654515-1654555:1:exon

position:1654555:1
position: 1654555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650554-1650941:1:exon

position:1650941:1
position: 1650941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1653862-1653963:1:exon

position:1653862:1
position: 1653862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653963:1
position: 1653963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1654515-1654555:1:exon

position:1654515:1
position: 1654515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102000446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC102000446
product: fatty acid-binding protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005361807.3
SIO_010081: LOC102000446
subclass of: SO_0000673
so part of: LOC102000446
location: join(1650648..1650941,1653384..1653556,1653862..1653963,1654515..1654779)
location: region:1650648-1654779:1
so has part: feature:1650648-1650941:1:exon
so has part: feature:1653384-1653556:1:exon
so has part: feature:1653862-1653963:1:exon
so has part: feature:1654515-1654779:1:exon

position:1650648:1
position: 1650648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650648-1650941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653384-1653556:1:exon

position:1653384:1
position: 1653384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653556:1
position: 1653556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1653862-1653963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1654515-1654779:1:exon

LOC102000446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC102000446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein 5 isoform X1
translation: MRISYWLSGTSPLQGDLSRGGARSRTAPPPPRSPCCCFRACPPAMASIKDLEGRWRLTESQGFEEYMKELGVGLALRKMGAMAKPDCVISCDGNNITIKTESTLKTTQFSCTLGEKFDETTADGRKTQTICTFTDGALVQHQNWDGKESTITRRVKDGKLVVDCVMNNVTCTRVYEKVE
SIO_010081: LOC102000446
subclass of: SO_0000673
so part of: LOC102000446
location: join(1650731..1650941,1653384..1653556,1653862..1653963,1654515..1654568)
location: region:1650731-1654568:1
so has part: feature:1650731-1650941:1:exon
so has part: feature:1653384-1653556:1:exon
so has part: feature:1653862-1653963:1:exon
so has part: feature:1654515-1654568:1:exon

XP_005361864.3
type: Protein
SIO_000068: ncbiprotein

position:1650731:1
position: 1650731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654568:1
position: 1654568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650731-1650941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653384-1653556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653862-1653963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1654515-1654568:1:exon

LOC102000446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC102000446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102000446 isoform X2
translation: MRISYWLSGTSPLQGDLSRGGARSRTAPPPPRSPCCCFRACPPAMASIKDLEGRWRLTESQGFEEYMKELDHLHLHRRCPGPAPELGREGKHNNQKSEGWKAGGGLCHEQCHLYSGL
SIO_010081: LOC102000446
subclass of: SO_0000673
so part of: LOC102000446
location: join(1650731..1650941,1653862..1653963,1654515..1654555)
location: region:1650731-1654555:1
so has part: feature:1650731-1650941:1:exon
so has part: feature:1653862-1653963:1:exon
so has part: feature:1654515-1654555:1:exon

XP_013207210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1650731-1650941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653862-1653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1654515-1654555:1:exon

LOC102001112
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102001112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1820844..1828196)
location: region:1820844-1828196:-1
so has part: feature:1820844-1828196:-1:exon
subclass of: SO_0000010

102001112
type: Gene
SIO_000068: ncbigene

position:1820844:-1
position: 1820844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828196:-1
position: 1828196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820844-1828196:-1:exon

LOC102001112
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC102001112
product: myelin P2 protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005361809.3
SIO_010081: LOC102001112
subclass of: SO_0000673
so part of: LOC102001112
location: complement(join(1820844..1821661,1826566..1826667,1826823..1826995,1828087..1828196))
location: region:1820844-1828196:-1
so has part: feature:1828087-1828196:-1:exon
so has part: feature:1826823-1826995:-1:exon
so has part: feature:1826566-1826667:-1:exon
so has part: feature:1820844-1821661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1828087-1828196:-1:exon

position:1828087:-1
position: 1828087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1826823-1826995:-1:exon

position:1826823:-1
position: 1826823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826995:-1
position: 1826995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1826566-1826667:-1:exon

position:1826566:-1
position: 1826566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826667:-1
position: 1826667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1820844-1821661:-1:exon

position:1821661:-1
position: 1821661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102001112
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC102001112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin P2 protein
translation: MSNKFLGTWKLVSSEHFDDYMKALGVGLANRKLGNLAKPTVVISKKGDYMTIRTESAFKNTEISFKLGQEFEETTADNRKTKSTVTLERGALRQVQRWNGKETTIKRKLLDGKMVVECMMKGVVCTRIYEKV
SIO_010081: LOC102001112
subclass of: SO_0000673
so part of: LOC102001112
location: complement(join(1821611..1821661,1826566..1826667,1826823..1826995,1828087..1828159))
location: region:1821611-1828159:-1
so has part: feature:1828087-1828159:-1:exon
so has part: feature:1826823-1826995:-1:exon
so has part: feature:1826566-1826667:-1:exon
so has part: feature:1821611-1821661:-1:exon

XP_005361866.1
type: Protein
SIO_000068: ncbiprotein

position:1821611:-1
position: 1821611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828159:-1
position: 1828159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1828087-1828159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1826823-1826995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826566-1826667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1821611-1821661:-1:exon

Fabp9
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fabp9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1839657..1843238)
location: region:1839657-1843238:-1
so has part: feature:1839657-1843238:-1:exon
subclass of: SO_0000010

102001386
type: Gene
SIO_000068: ncbigene

position:1839657:-1
position: 1839657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843238:-1
position: 1843238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839657-1843238:-1:exon

Fabp9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fabp9
product: fatty acid binding protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013351755.1
SIO_010081: Fabp9
subclass of: SO_0000673
so part of: Fabp9
location: complement(join(1839657..1839840,1840005..1840106,1840706..1840878,1843079..1843238))
location: region:1839657-1843238:-1
so has part: feature:1843079-1843238:-1:exon
so has part: feature:1840706-1840878:-1:exon
so has part: feature:1840005-1840106:-1:exon
so has part: feature:1839657-1839840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1843079-1843238:-1:exon

position:1843079:-1
position: 1843079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1840706-1840878:-1:exon

position:1840706:-1
position: 1840706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840878:-1
position: 1840878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1840005-1840106:-1:exon

position:1840005:-1
position: 1840005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840106:-1
position: 1840106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1839657-1839840:-1:exon

position:1839840:-1
position: 1839840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fabp9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fabp9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein 9
translation: MIEPFLGTWKLVSSENFEDYMRELGVDFAARNVAGLVKPTVNISLNGEKINIQTESSLQNTEISFKLGEQFDETTADSRQVKSIVTLEGGSMIQVQKWLGKETTIKRKIVEGKMVVECTMNNVVCTRTYEKA
SIO_010081: Fabp9
subclass of: SO_0000673
so part of: Fabp9
location: complement(join(1839790..1839840,1840005..1840106,1840706..1840878,1843079..1843151))
location: region:1839790-1843151:-1
so has part: feature:1843079-1843151:-1:exon
so has part: feature:1840706-1840878:-1:exon
so has part: feature:1840005-1840106:-1:exon
so has part: feature:1839790-1839840:-1:exon

XP_013207209.1
type: Protein
SIO_000068: ncbiprotein

position:1839790:-1
position: 1839790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843151:-1
position: 1843151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843079-1843151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1840706-1840878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1840005-1840106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1839790-1839840:-1:exon

LOC102001667
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102001667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1851532..1855936)
location: region:1851532-1855936:-1
so has part: feature:1851532-1855936:-1:exon
subclass of: SO_0000010

102001667
type: Gene
SIO_000068: ncbigene

position:1851532:-1
position: 1851532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855936:-1
position: 1855936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1851532-1855936:-1:exon

LOC102001667
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC102001667
product: fatty acid-binding protein, adipocyte
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005361811.2
SIO_010081: LOC102001667
subclass of: SO_0000673
so part of: LOC102001667
location: complement(join(1851532..1851757,1852196..1852297,1853183..1853355,1855681..1855936))
location: region:1851532-1855936:-1
so has part: feature:1855681-1855936:-1:exon
so has part: feature:1853183-1853355:-1:exon
so has part: feature:1852196-1852297:-1:exon
so has part: feature:1851532-1851757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1855681-1855936:-1:exon

position:1855681:-1
position: 1855681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1853183-1853355:-1:exon

position:1853183:-1
position: 1853183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853355:-1
position: 1853355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1852196-1852297:-1:exon

position:1852196:-1
position: 1852196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852297:-1
position: 1852297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1851532-1851757:-1:exon

position:1851757:-1
position: 1851757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102001667
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC102001667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, adipocyte
translation: MIWGHPYWSLLRSHGWDIFKRELFGLKRITAPSPPAASVSPGREISKVHRMCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIRSESTFKNTEISFKLGQEFEEITADDRKVKSLITLENGALVQVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRTYERA
SIO_010081: LOC102001667
subclass of: SO_0000673
so part of: LOC102001667
location: complement(join(1851707..1851757,1852196..1852297,1853183..1853355,1855681..1855903))
location: region:1851707-1855903:-1
so has part: feature:1855681-1855903:-1:exon
so has part: feature:1853183-1853355:-1:exon
so has part: feature:1852196-1852297:-1:exon
so has part: feature:1851707-1851757:-1:exon

XP_005361868.1
type: Protein
SIO_000068: ncbiprotein

position:1851707:-1
position: 1851707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855903:-1
position: 1855903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855681-1855903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1853183-1853355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1852196-1852297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1851707-1851757:-1:exon

LOC113457746
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1883881..1891682)
location: region:1883881-1891682:-1
so has part: feature:1883881-1891682:-1:exon

113457746
type: Gene
SIO_000068: ncbigene

position:1883881:-1
position: 1883881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891682:-1
position: 1891682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883881-1891682:-1:exon

LOC113457746
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113457746
subclass of: SO_0000673
so part of: LOC113457746
location: complement(1883881..1883928)
location: region:1883881-1883928:-1
so has part: feature:1883881-1883928:-1:exon

position:1883928:-1
position: 1883928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883881-1883928:-1:exon

LOC113457746
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113457746
subclass of: SO_0000673
so part of: LOC113457746
location: complement(1887567..1887671)
location: region:1887567-1887671:-1
so has part: feature:1887567-1887671:-1:exon

position:1887567:-1
position: 1887567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887671:-1
position: 1887671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1887567-1887671:-1:exon

LOC113457746
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113457746
subclass of: SO_0000673
so part of: LOC113457746
location: complement(1889489..1889660)
location: region:1889489-1889660:-1
so has part: feature:1889489-1889660:-1:exon

position:1889489:-1
position: 1889489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889660:-1
position: 1889660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1889489-1889660:-1:exon

LOC113457746
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113457746
subclass of: SO_0000673
so part of: LOC113457746
location: complement(1891595..1891682)
location: region:1891595-1891682:-1
so has part: feature:1891595-1891682:-1:exon

position:1891595:-1
position: 1891595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1891595-1891682:-1:exon

Impa1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Impa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1967267..1984859)
location: region:1967267-1984859:-1
so has part: feature:1967267-1984859:-1:exon
subclass of: SO_0000010

102001942
type: Gene
SIO_000068: ncbigene

position:1967267:-1
position: 1967267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984859:-1
position: 1984859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1967267-1984859:-1:exon

Impa1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Impa1
product: inositol monophosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_013351761.2
SIO_010081: Impa1
subclass of: SO_0000673
so part of: Impa1
location: complement(join(1967267..1969544,1970263..1970414,1974311..1974419,1976605..1976713,1978787..1978832,1979954..1980058,1981851..1981984,1982526..1982588,1984738..1984859))
location: region:1967267-1984859:-1
so has part: feature:1984738-1984859:-1:exon
so has part: feature:1982526-1982588:-1:exon
so has part: feature:1981851-1981984:-1:exon
so has part: feature:1979954-1980058:-1:exon
so has part: feature:1978787-1978832:-1:exon
so has part: feature:1976605-1976713:-1:exon
so has part: feature:1974311-1974419:-1:exon
so has part: feature:1970263-1970414:-1:exon
so has part: feature:1967267-1969544:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1984738-1984859:-1:exon

position:1984738:-1
position: 1984738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1982526-1982588:-1:exon

position:1982526:-1
position: 1982526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982588:-1
position: 1982588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1981851-1981984:-1:exon

position:1981851:-1
position: 1981851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1981984:-1
position: 1981984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1979954-1980058:-1:exon

position:1979954:-1
position: 1979954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980058:-1
position: 1980058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1978787-1978832:-1:exon

position:1978787:-1
position: 1978787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978832:-1
position: 1978832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1976605-1976713:-1:exon

position:1976605:-1
position: 1976605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976713:-1
position: 1976713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1974311-1974419:-1:exon

position:1974311:-1
position: 1974311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974419:-1
position: 1974419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1970263-1970414:-1:exon

position:1970263:-1
position: 1970263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1970414:-1
position: 1970414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1967267-1969544:-1:exon

position:1969544:-1
position: 1969544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Impa1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Impa1
product: inositol monophosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005361812.3
SIO_010081: Impa1
subclass of: SO_0000673
so part of: Impa1
location: complement(join(1967267..1969544,1970263..1970414,1974311..1974419,1976605..1976713,1978787..1978832,1979954..1980058,1981851..1981984,1982526..1982591,1984738..1984858))
location: region:1967267-1984858:-1
so has part: feature:1984738-1984858:-1:exon
so has part: feature:1982526-1982591:-1:exon
so has part: feature:1981851-1981984:-1:exon
so has part: feature:1979954-1980058:-1:exon
so has part: feature:1978787-1978832:-1:exon
so has part: feature:1976605-1976713:-1:exon
so has part: feature:1974311-1974419:-1:exon
so has part: feature:1970263-1970414:-1:exon
so has part: feature:1967267-1969544:-1:exon

position:1984858:-1
position: 1984858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984738-1984858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1982526-1982591:-1:exon

position:1982591:-1
position: 1982591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1981851-1981984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1979954-1980058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1978787-1978832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1976605-1976713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1974311-1974419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1970263-1970414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1967267-1969544:-1:exon

Impa1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Impa1
product: inositol monophosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026786732.1
SIO_010081: Impa1
subclass of: SO_0000673
so part of: Impa1
location: complement(join(1967267..1969544,1970263..1970414,1974311..1974419,1976605..1976713,1978787..1978832,1979954..1980058,1981851..1981984,1982526..1982591,1984516..1984655))
location: region:1967267-1984655:-1
so has part: feature:1984516-1984655:-1:exon
so has part: feature:1982526-1982591:-1:exon
so has part: feature:1981851-1981984:-1:exon
so has part: feature:1979954-1980058:-1:exon
so has part: feature:1978787-1978832:-1:exon
so has part: feature:1976605-1976713:-1:exon
so has part: feature:1974311-1974419:-1:exon
so has part: feature:1970263-1970414:-1:exon
so has part: feature:1967267-1969544:-1:exon

position:1984655:-1
position: 1984655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984516-1984655:-1:exon

position:1984516:-1
position: 1984516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1982526-1982591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1981851-1981984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1979954-1980058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1978787-1978832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1976605-1976713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1974311-1974419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1970263-1970414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1967267-1969544:-1:exon

Impa1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Impa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 1 isoform X2
translation: MLSVVLRKQPSGFARPPSLIAEVLGRRTSPTLRNYLKMADPWQECMEYAVTLARRAGEMIREALQNEMNVMIKSSPADLVTVTDQNVEKMLLSSIKEKYPSHSFIGEESVAAGEKTVFTDKPTWIIDPVDGTTNFVHRFPFVAVSIGFVVNKQMEFGVVYSCVEDKMYTGRKGKGAFCNGQKLRVSQQEDITKALLVTELGSSRKPETLRIVLSNMEKLCSLPIHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDMAGAGVIVTEAGGVLMDVTGGPFDLMSRRIIAANSKALAERIAKEIEIIPLQRDDES
SIO_010081: Impa1
subclass of: SO_0000673
so part of: Impa1
location: complement(join(1969429..1969544,1970263..1970414,1974311..1974419,1976605..1976713,1978787..1978832,1979954..1980058,1981851..1981984,1982526..1982591,1984516..1984623))
location: region:1969429-1984623:-1
so has part: feature:1984516-1984623:-1:exon
so has part: feature:1982526-1982591:-1:exon
so has part: feature:1981851-1981984:-1:exon
so has part: feature:1979954-1980058:-1:exon
so has part: feature:1978787-1978832:-1:exon
so has part: feature:1976605-1976713:-1:exon
so has part: feature:1974311-1974419:-1:exon
so has part: feature:1970263-1970414:-1:exon
so has part: feature:1969429-1969544:-1:exon

XP_026642533.1
type: Protein
SIO_000068: ncbiprotein

position:1969429:-1
position: 1969429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984623:-1
position: 1984623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984516-1984623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1982526-1982591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1981851-1981984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1979954-1980058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1978787-1978832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1976605-1976713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1974311-1974419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1970263-1970414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1969429-1969544:-1:exon

Impa1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Impa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 1 isoform X1
translation: MADPWQECMEYAVTLARRAGEMIREALQNEMNVMIKSSPADLVTVTDQNVEKMLLSSIKEKYPSHSFIGEESVAAGEKTVFTDKPTWIIDPVDGTTNFVHRFPFVAVSIGFVVNKQMEFGVVYSCVEDKMYTGRKGKGAFCNGQKLRVSQQEDITKALLVTELGSSRKPETLRIVLSNMEKLCSLPIHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDMAGAGVIVTEAGGVLMDVTGGPFDLMSRRIIAANSKALAERIAKEIEIIPLQRDDES
SIO_010081: Impa1
subclass of: SO_0000673
so part of: Impa1
location: complement(join(1969429..1969544,1970263..1970414,1974311..1974419,1976605..1976713,1978787..1978832,1979954..1980058,1981851..1981984,1982526..1982588))
location: region:1969429-1982588:-1
so has part: feature:1982526-1982588:-1:exon
so has part: feature:1981851-1981984:-1:exon
so has part: feature:1979954-1980058:-1:exon
so has part: feature:1978787-1978832:-1:exon
so has part: feature:1976605-1976713:-1:exon
so has part: feature:1974311-1974419:-1:exon
so has part: feature:1970263-1970414:-1:exon
so has part: feature:1969429-1969544:-1:exon

XP_005361869.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1982526-1982588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1981851-1981984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1979954-1980058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1978787-1978832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1976605-1976713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1974311-1974419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970263-1970414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1969429-1969544:-1:exon

Impa1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Impa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 1 isoform X1
translation: MADPWQECMEYAVTLARRAGEMIREALQNEMNVMIKSSPADLVTVTDQNVEKMLLSSIKEKYPSHSFIGEESVAAGEKTVFTDKPTWIIDPVDGTTNFVHRFPFVAVSIGFVVNKQMEFGVVYSCVEDKMYTGRKGKGAFCNGQKLRVSQQEDITKALLVTELGSSRKPETLRIVLSNMEKLCSLPIHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDMAGAGVIVTEAGGVLMDVTGGPFDLMSRRIIAANSKALAERIAKEIEIIPLQRDDES
SIO_010081: Impa1
subclass of: SO_0000673
so part of: Impa1
location: complement(join(1969429..1969544,1970263..1970414,1974311..1974419,1976605..1976713,1978787..1978832,1979954..1980058,1981851..1981984,1982526..1982588))
location: region:1969429-1982588:-1
so has part: feature:1982526-1982588:-1:exon
so has part: feature:1981851-1981984:-1:exon
so has part: feature:1979954-1980058:-1:exon
so has part: feature:1978787-1978832:-1:exon
so has part: feature:1976605-1976713:-1:exon
so has part: feature:1974311-1974419:-1:exon
so has part: feature:1970263-1970414:-1:exon
so has part: feature:1969429-1969544:-1:exon

XP_013207215.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1982526-1982588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1981851-1981984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1979954-1980058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1978787-1978832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1976605-1976713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1974311-1974419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970263-1970414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1969429-1969544:-1:exon

Slc10a5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc10a5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1988500..1992060)
location: region:1988500-1992060:-1
so has part: feature:1988500-1992060:-1:exon
subclass of: SO_0000010

101987349
type: Gene
SIO_000068: ncbigene

position:1988500:-1
position: 1988500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992060:-1
position: 1992060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1988500-1992060:-1:exon

Slc10a5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc10a5
product: solute carrier family 10 member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005361845.1
SIO_010081: Slc10a5
subclass of: SO_0000673
so part of: Slc10a5
location: complement(join(1988500..1990113,1991971..1992060))
location: region:1988500-1992060:-1
so has part: feature:1991971-1992060:-1:exon
so has part: feature:1988500-1990113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1991971-1992060:-1:exon

position:1991971:-1
position: 1991971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1988500-1990113:-1:exon

position:1990113:-1
position: 1990113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc10a5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc10a5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 5
translation: MRVSVPLTPCVQVTLKAENPRLRVSLPNETGALYSLQAQRSLLLDLDLPNPSCCLTHIYAFCPLDLQECPSISEKKKKILSFHVWFIKLFTIFGKSFVILLLLVTPGEARKSFLSFLNIQNSEILSFTKTKEAAIVRSSYKGKRPDSSYLFVKVEDPKVLQVVNVTKTSRDATDFTLSLMTFPGETNMTIQLWTSEGRHKRLIEEITDVKVRVLGQTKDSLFQAPVHVNQYILLLVLSMILLNKCAFGCKIEFQVLQTVWKRPLPVVLGAVTQFFLMPFCGFFLSQILGLHEAQAFGFVMTCTCPGGGGGYLFALLLEGDVTLAILMTCTSTSLALIMMPVNSYIYSRLLGLAGVFHVPVLKIVSTLLFILTPVSIGVVIKHRSPEKAVCLERVVQPLSLTLMFVGIYLAFRMGLVFLRMANLNMLLLGLLVPALGFMFGYFFAKVCMLPLPVCKTIAIESGMLNSFLALAIIQLSLPQLKAYEASVAPFTVAMCSGCEMFLLFLTYKGRRLGTFSTEAEKAPLV
SIO_010081: Slc10a5
subclass of: SO_0000673
so part of: Slc10a5
location: complement(join(1988626..1990113,1991971..1992060))
location: region:1988626-1992060:-1
so has part: feature:1991971-1992060:-1:exon
so has part: feature:1988626-1990113:-1:exon

XP_005361902.1
type: Protein
SIO_000068: ncbiprotein

position:1988626:-1
position: 1988626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1991971-1992060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988626-1990113:-1:exon

Zfand1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1992819..2002347)
location: region:1992819-2002347:-1
so has part: feature:1992819-2002347:-1:exon
subclass of: SO_0000010

102002217
type: Gene
SIO_000068: ncbigene

position:1992819:-1
position: 1992819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002347:-1
position: 2002347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1992819-2002347:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005361814.2
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1993990,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2000530,2002263..2002347))
location: region:1992819-2002347:-1
so has part: feature:2002263-2002347:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1993990:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002263-2002347:-1:exon

position:2002263:-1
position: 2002263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

position:2000488:-1
position: 2000488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000530:-1
position: 2000530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1999722-1999761:-1:exon

position:1999722:-1
position: 1999722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999761:-1
position: 1999761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1997756-1997883:-1:exon

position:1997756:-1
position: 1997756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997883:-1
position: 1997883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1997585-1997676:-1:exon

position:1997585:-1
position: 1997585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997676:-1
position: 1997676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1996205-1996326:-1:exon

position:1996205:-1
position: 1996205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996326:-1
position: 1996326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1993856-1993990:-1:exon

position:1993856:-1
position: 1993856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993990:-1
position: 1993990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1992819-1993771:-1:exon

position:1993771:-1
position: 1993771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005361813.2
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2000530,2002263..2002347))
location: region:1992819-2002347:-1
so has part: feature:2002263-2002347:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002263-2002347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993856-1994011:-1:exon

position:1994011:-1
position: 1994011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026786754.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,2002190..2002335))
location: region:1992819-2002335:-1
so has part: feature:2002190-2002335:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

position:2002335:-1
position: 2002335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2002190-2002335:-1:exon

position:2002190:-1
position: 2002190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026786753.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,2000488..2000530,2002190..2002335))
location: region:1992819-2002335:-1
so has part: feature:2002190-2002335:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002190-2002335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026786750.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1999408,2000488..2000530,2002190..2002335))
location: region:1992819-2002335:-1
so has part: feature:2002190-2002335:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1997756-1999408:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002190-2002335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997756-1999408:-1:exon

position:1999408:-1
position: 1999408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_026786758.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2000530,2002190..2002335))
location: region:1992819-2002335:-1
so has part: feature:2002190-2002335:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002190-2002335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026786749.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1999408,1999722..1999761,2000488..2000530,2002190..2002335))
location: region:1992819-2002335:-1
so has part: feature:2002190-2002335:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1999408:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002190-2002335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997756-1999408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026786751.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,1999042..1999408,1999722..2000530,2002190..2002335))
location: region:1992819-2002335:-1
so has part: feature:2002190-2002335:-1:exon
so has part: feature:1999722-2000530:-1:exon
so has part: feature:1999042-1999408:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002190-2002335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999722-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999042-1999408:-1:exon

position:1999042:-1
position: 1999042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026786757.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,2002263..2002325))
location: region:1992819-2002325:-1
so has part: feature:2002263-2002325:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

position:2002325:-1
position: 2002325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2002263-2002325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026786755.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,2000488..2000530,2002263..2002288))
location: region:1992819-2002288:-1
so has part: feature:2002263-2002288:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

position:2002288:-1
position: 2002288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2002263-2002288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_026786748.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1993990,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2002157))
location: region:1992819-2002157:-1
so has part: feature:2000488-2002157:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1993990:-1:exon
so has part: feature:1992819-1993771:-1:exon

position:2002157:-1
position: 2002157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2000488-2002157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993856-1993990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026786752.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1999408,2001447..2002154))
location: region:1992819-2002154:-1
so has part: feature:2001447-2002154:-1:exon
so has part: feature:1997756-1999408:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

position:2002154:-1
position: 2002154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2001447-2002154:-1:exon

position:2001447:-1
position: 2001447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1997756-1999408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_026786747.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2002154))
location: region:1992819-2002154:-1
so has part: feature:2000488-2002154:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2000488-2002154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfand1
product: zinc finger AN1-type containing 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_026786756.1
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1992819..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,2000488..2000694))
location: region:1992819-2000694:-1
so has part: feature:2000488-2000694:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1992819-1993771:-1:exon

position:2000694:-1
position: 2000694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2000488-2000694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1992819-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X4
translation: MAELDVGQHCEVQHCRQRDFLPFVCDGCSGIFCLEHRSKDAHGCPEVNIIKERPKTDEHKPYPCSFKDCTEVELVAVVCPYCEKNFCLRHRHQSDHGCEKLETPQPRMSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1993990,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2000530,2002263..2002317))
location: region:1993601-2002317:-1
so has part: feature:2002263-2002317:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1993990:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_005361871.1
type: Protein
SIO_000068: ncbiprotein

position:1993601:-1
position: 1993601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002317:-1
position: 2002317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2002263-2002317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993856-1993990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X3
translation: MAELDVGQHCEVQHCRQRDFLPFVCDGCSGIFCLEHRSKDAHGCPEVNIIKERPKTDEHKPYPCSFKDCTEVELVAVVCPYCEKNFCLRHRHQSDHGCEKLETPQPRMSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2000530,2002263..2002317))
location: region:1993601-2002317:-1
so has part: feature:2002263-2002317:-1:exon
so has part: feature:2000488-2000530:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_005361870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2002263-2002317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000488-2000530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X2
translation: MCHHCVAKGNFVIELARRFFLLKKTKSDTHQYLPYFPPILDFLPFVCDGCSGIFCLEHRSKDAHGCPEVNIIKERPKTDEHKPYPCSFKDCTEVELVAVVCPYCEKNFCLRHRHQSDHGCEKLETPQPRMSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1993990,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2000651))
location: region:1993601-2000651:-1
so has part: feature:2000488-2000651:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1993990:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642549.1
type: Protein
SIO_000068: ncbiprotein

position:2000651:-1
position: 2000651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2000488-2000651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993856-1993990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X1
translation: MCHHCVAKGNFVIELARRFFLLKKTKSDTHQYLPYFPPILDFLPFVCDGCSGIFCLEHRSKDAHGCPEVNIIKERPKTDEHKPYPCSFKDCTEVELVAVVCPYCEKNFCLRHRHQSDHGCEKLETPQPRMSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997676,1997756..1997883,1999722..1999761,2000488..2000651))
location: region:1993601-2000651:-1
so has part: feature:2000488-2000651:-1:exon
so has part: feature:1999722-1999761:-1:exon
so has part: feature:1997756-1997883:-1:exon
so has part: feature:1997585-1997676:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2000488-2000651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999722-1999761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1997756-1997883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997585-1997676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642550.1
type: Protein
SIO_000068: ncbiprotein

position:1997621:-1
position: 1997621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Zfand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X5
translation: MSATQKLVKDIIDSKSGGAVSKGRKGAKTSGTAAKVALMKLKMHADGDKSLPQTERIYFQVYLPKGSKEKSKAMFFCLRWSVGKVVDFAASLAGLRNENNKLMAKKLRLCHVPSGEALPLDHTLETWITKEDCPLHNGGNVILEYLNNEEQFLKNVDSYLE
SIO_010081: Zfand1
subclass of: SO_0000673
so part of: Zfand1
location: complement(join(1993601..1993771,1993856..1994011,1996205..1996326,1997585..1997621))
location: region:1993601-1997621:-1
so has part: feature:1997585-1997621:-1:exon
so has part: feature:1996205-1996326:-1:exon
so has part: feature:1993856-1994011:-1:exon
so has part: feature:1993601-1993771:-1:exon

XP_026642559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1997585-1997621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996205-1996326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993856-1994011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993601-1993771:-1:exon

Chmp4c
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Chmp4c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2037590..2077982
location: region:2037590-2077982:1
so has part: feature:2037590-2077982:1:exon
subclass of: SO_0000010

102002676
type: Gene
SIO_000068: ncbigene

position:2037590:1
position: 2037590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077982:1
position: 2077982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037590-2077982:1:exon

Chmp4c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Chmp4c
product: charged multivesicular body protein 4C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005361815.2
SIO_010081: Chmp4c
subclass of: SO_0000673
so part of: Chmp4c
location: join(2037590..2037891,2069368..2069545,2071523..2071637,2075631..2075784,2075949..2077982)
location: region:2037590-2077982:1
so has part: feature:2037590-2037891:1:exon
so has part: feature:2069368-2069545:1:exon
so has part: feature:2071523-2071637:1:exon
so has part: feature:2075631-2075784:1:exon
so has part: feature:2075949-2077982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2037590-2037891:1:exon

position:2037891:1
position: 2037891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2069368-2069545:1:exon

position:2069368:1
position: 2069368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2069545:1
position: 2069545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2071523-2071637:1:exon

position:2071523:1
position: 2071523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071637:1
position: 2071637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2075631-2075784:1:exon

position:2075631:1
position: 2075631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075784:1
position: 2075784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2075949-2077982:1:exon

position:2075949:1
position: 2075949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Chmp4c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Chmp4c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 4c
translation: MSKLGKLFRGTRSSRARAAPSPQEALARLRETEEMLAKKQEYLESRIQRELALAKKHGSQNKRAALQALKRKKRFEKQLSQVDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHENMDLNKIDDLMQDITEQQDIAQEISEAFSQRVQFADGFDEDELLAELEELEQEELNKKMTKMQLPNVPASSLPSQPSRKSSMPSSAHRSRAASSRRTEDDDDFQQLAAWAT
SIO_010081: Chmp4c
subclass of: SO_0000673
so part of: Chmp4c
location: join(2037702..2037891,2069368..2069545,2071523..2071637,2075631..2075784,2075949..2076010)
location: region:2037702-2076010:1
so has part: feature:2037702-2037891:1:exon
so has part: feature:2069368-2069545:1:exon
so has part: feature:2071523-2071637:1:exon
so has part: feature:2075631-2075784:1:exon
so has part: feature:2075949-2076010:1:exon

XP_005361872.1
type: Protein
SIO_000068: ncbiprotein

position:2037702:1
position: 2037702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076010:1
position: 2076010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037702-2037891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2069368-2069545:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2071523-2071637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2075631-2075784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2075949-2076010:1:exon

Snx16
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Snx16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2102493..2126297)
location: region:2102493-2126297:-1
so has part: feature:2102493-2126297:-1:exon
subclass of: SO_0000010

102002955
type: Gene
SIO_000068: ncbigene

position:2102493:-1
position: 2102493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126297:-1
position: 2126297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2102493-2126297:-1:exon

Snx16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Snx16
product: sorting nexin 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005361816.2
SIO_010081: Snx16
subclass of: SO_0000673
so part of: Snx16
location: complement(join(2102493..2103548,2104577..2104696,2105282..2105418,2110595..2110664,2119827..2119975,2120879..2120965,2123794..2124266,2125133..2125249,2126111..2126297))
location: region:2102493-2126297:-1
so has part: feature:2126111-2126297:-1:exon
so has part: feature:2125133-2125249:-1:exon
so has part: feature:2123794-2124266:-1:exon
so has part: feature:2120879-2120965:-1:exon
so has part: feature:2119827-2119975:-1:exon
so has part: feature:2110595-2110664:-1:exon
so has part: feature:2105282-2105418:-1:exon
so has part: feature:2104577-2104696:-1:exon
so has part: feature:2102493-2103548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2126111-2126297:-1:exon

position:2126111:-1
position: 2126111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2125133-2125249:-1:exon

position:2125133:-1
position: 2125133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2125249:-1
position: 2125249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2123794-2124266:-1:exon

position:2123794:-1
position: 2123794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2124266:-1
position: 2124266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2120879-2120965:-1:exon

position:2120879:-1
position: 2120879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2120965:-1
position: 2120965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2119827-2119975:-1:exon

position:2119827:-1
position: 2119827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119975:-1
position: 2119975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2110595-2110664:-1:exon

position:2110595:-1
position: 2110595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2110664:-1
position: 2110664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2105282-2105418:-1:exon

position:2105282:-1
position: 2105282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105418:-1
position: 2105418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2104577-2104696:-1:exon

position:2104577:-1
position: 2104577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104696:-1
position: 2104696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2102493-2103548:-1:exon

position:2103548:-1
position: 2103548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Snx16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Snx16
product: sorting nexin 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026786677.1
SIO_010081: Snx16
subclass of: SO_0000673
so part of: Snx16
location: complement(join(2102493..2103548,2104577..2104696,2105282..2105418,2110595..2110664,2119827..2119975,2120879..2120965,2123794..2124266,2125133..2125244,2126111..2126279))
location: region:2102493-2126279:-1
so has part: feature:2126111-2126279:-1:exon
so has part: feature:2125133-2125244:-1:exon
so has part: feature:2123794-2124266:-1:exon
so has part: feature:2120879-2120965:-1:exon
so has part: feature:2119827-2119975:-1:exon
so has part: feature:2110595-2110664:-1:exon
so has part: feature:2105282-2105418:-1:exon
so has part: feature:2104577-2104696:-1:exon
so has part: feature:2102493-2103548:-1:exon

position:2126279:-1
position: 2126279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2126111-2126279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2125133-2125244:-1:exon

position:2125244:-1
position: 2125244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2123794-2124266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2120879-2120965:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119827-2119975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2110595-2110664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2105282-2105418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2104577-2104696:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2102493-2103548:-1:exon

Snx16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Snx16
product: sorting nexin 16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026786678.1
SIO_010081: Snx16
subclass of: SO_0000673
so part of: Snx16
location: complement(join(2102493..2103548,2104577..2104696,2105282..2105418,2110595..2110664,2119827..2119975,2120879..2120965,2123794..2124266,2125133..2125249,2125939..2125959))
location: region:2102493-2125959:-1
so has part: feature:2125939-2125959:-1:exon
so has part: feature:2125133-2125249:-1:exon
so has part: feature:2123794-2124266:-1:exon
so has part: feature:2120879-2120965:-1:exon
so has part: feature:2119827-2119975:-1:exon
so has part: feature:2110595-2110664:-1:exon
so has part: feature:2105282-2105418:-1:exon
so has part: feature:2104577-2104696:-1:exon
so has part: feature:2102493-2103548:-1:exon

position:2125959:-1
position: 2125959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2125939-2125959:-1:exon

position:2125939:-1
position: 2125939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2125133-2125249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2123794-2124266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2120879-2120965:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119827-2119975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2110595-2110664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2105282-2105418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2104577-2104696:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2102493-2103548:-1:exon

Snx16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Snx16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-16
translation: MATPYVPVPMPIGNSASGFTASRNQRSSSFGSGSTSSNSSRGQLEDPNMGNFKQTNVQDRMDSTSSVCGSPLIRTKFTGVDSSIEYSARPRDTEEQHADSVNWEERPSTPTILGYEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYHLQRELLEKQKEVESLRKLLGEKQLHIDTLESRMRTLSLEPEASLYVSGAEGRQILRVESSVLQVSRDVLDEDSRANNKPHFNPRETRSAVADIEVAQLAYSVEDD
SIO_010081: Snx16
subclass of: SO_0000673
so part of: Snx16
location: complement(join(2103452..2103548,2104577..2104696,2105282..2105418,2110595..2110664,2119827..2119975,2120879..2120965,2123794..2124168))
location: region:2103452-2124168:-1
so has part: feature:2123794-2124168:-1:exon
so has part: feature:2120879-2120965:-1:exon
so has part: feature:2119827-2119975:-1:exon
so has part: feature:2110595-2110664:-1:exon
so has part: feature:2105282-2105418:-1:exon
so has part: feature:2104577-2104696:-1:exon
so has part: feature:2103452-2103548:-1:exon

XP_026642478.1
type: Protein
SIO_000068: ncbiprotein

position:2103452:-1
position: 2103452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2124168:-1
position: 2124168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2123794-2124168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2120879-2120965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2119827-2119975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2110595-2110664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2105282-2105418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2104577-2104696:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2103452-2103548:-1:exon

Snx16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Snx16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-16
translation: MATPYVPVPMPIGNSASGFTASRNQRSSSFGSGSTSSNSSRGQLEDPNMGNFKQTNVQDRMDSTSSVCGSPLIRTKFTGVDSSIEYSARPRDTEEQHADSVNWEERPSTPTILGYEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYHLQRELLEKQKEVESLRKLLGEKQLHIDTLESRMRTLSLEPEASLYVSGAEGRQILRVESSVLQVSRDVLDEDSRANNKPHFNPRETRSAVADIEVAQLAYSVEDD
SIO_010081: Snx16
subclass of: SO_0000673
so part of: Snx16
location: complement(join(2103452..2103548,2104577..2104696,2105282..2105418,2110595..2110664,2119827..2119975,2120879..2120965,2123794..2124168))
location: region:2103452-2124168:-1
so has part: feature:2123794-2124168:-1:exon
so has part: feature:2120879-2120965:-1:exon
so has part: feature:2119827-2119975:-1:exon
so has part: feature:2110595-2110664:-1:exon
so has part: feature:2105282-2105418:-1:exon
so has part: feature:2104577-2104696:-1:exon
so has part: feature:2103452-2103548:-1:exon

XP_026642479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2123794-2124168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2120879-2120965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2119827-2119975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2110595-2110664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2105282-2105418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2104577-2104696:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2103452-2103548:-1:exon

Snx16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Snx16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-16
translation: MATPYVPVPMPIGNSASGFTASRNQRSSSFGSGSTSSNSSRGQLEDPNMGNFKQTNVQDRMDSTSSVCGSPLIRTKFTGVDSSIEYSARPRDTEEQHADSVNWEERPSTPTILGYEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYHLQRELLEKQKEVESLRKLLGEKQLHIDTLESRMRTLSLEPEASLYVSGAEGRQILRVESSVLQVSRDVLDEDSRANNKPHFNPRETRSAVADIEVAQLAYSVEDD
SIO_010081: Snx16
subclass of: SO_0000673
so part of: Snx16
location: complement(join(2103452..2103548,2104577..2104696,2105282..2105418,2110595..2110664,2119827..2119975,2120879..2120965,2123794..2124168))
location: region:2103452-2124168:-1
so has part: feature:2123794-2124168:-1:exon
so has part: feature:2120879-2120965:-1:exon
so has part: feature:2119827-2119975:-1:exon
so has part: feature:2110595-2110664:-1:exon
so has part: feature:2105282-2105418:-1:exon
so has part: feature:2104577-2104696:-1:exon
so has part: feature:2103452-2103548:-1:exon

XP_005361873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2123794-2124168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2120879-2120965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2119827-2119975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2110595-2110664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2105282-2105418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2104577-2104696:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2103452-2103548:-1:exon

LOC101987905
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101987905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2127564..2139850
location: region:2127564-2139850:1
so has part: feature:2127564-2139850:1:exon

101987905
type: Gene
SIO_000068: ncbigene

position:2127564:1
position: 2127564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139850:1
position: 2139850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2127564-2139850:1:exon

LOC101987905
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101987905
subclass of: SO_0000673
so part of: LOC101987905
location: 2127564..2127654
location: region:2127564-2127654:1
so has part: feature:2127564-2127654:1:exon

position:2127654:1
position: 2127654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2127564-2127654:1:exon

LOC101987905
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101987905
subclass of: SO_0000673
so part of: LOC101987905
location: 2136158..2136329
location: region:2136158-2136329:1
so has part: feature:2136158-2136329:1:exon

position:2136158:1
position: 2136158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2136329:1
position: 2136329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2136158-2136329:1:exon

LOC101987905
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101987905
subclass of: SO_0000673
so part of: LOC101987905
location: 2137385..2139183
location: region:2137385-2139183:1
so has part: feature:2137385-2139183:1:exon

position:2137385:1
position: 2137385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139183:1
position: 2139183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2137385-2139183:1:exon

LOC101987905
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101987905
subclass of: SO_0000673
so part of: LOC101987905
location: 2139602..2139850
location: region:2139602-2139850:1
so has part: feature:2139602-2139850:1:exon

position:2139602:1
position: 2139602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139602-2139850:1:exon

LOC101988168
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101988168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2962905..2971898
location: region:2962905-2971898:1
so has part: feature:2962905-2971898:1:exon

101988168
type: Gene
SIO_000068: ncbigene

position:2962905:1
position: 2962905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971898:1
position: 2971898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962905-2971898:1:exon

LOC101988168
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101988168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101988168
subclass of: SO_0000673
so part of: LOC101988168
location: 2962905..2963356
location: region:2962905-2963356:1
so has part: feature:2962905-2963356:1:exon

position:2963356:1
position: 2963356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962905-2963356:1:exon

LOC101988168
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101988168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101988168
subclass of: SO_0000673
so part of: LOC101988168
location: 2970955..2971588
location: region:2970955-2971588:1
so has part: feature:2970955-2971588:1:exon

position:2970955:1
position: 2970955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971588:1
position: 2971588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2970955-2971588:1:exon

LOC101988168
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101988168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101988168
subclass of: SO_0000673
so part of: LOC101988168
location: 2971631..2971898
location: region:2971631-2971898:1
so has part: feature:2971631-2971898:1:exon

position:2971631:1
position: 2971631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971631-2971898:1:exon

LOC101979501
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3084868..3085379
location: region:3084868-3085379:1
so has part: feature:3084868-3085379:1:exon

101979501
type: Gene
SIO_000068: ncbigene

position:3084868:1
position: 3084868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3085379:1
position: 3085379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084868-3085379:1:exon

LOC101979501
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC101979501
subclass of: SO_0000673
so part of: LOC101979501
location: 3084868..3085195
location: region:3084868-3085195:1
so has part: feature:3084868-3085195:1:exon

position:3085195:1
position: 3085195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084868-3085195:1:exon

LOC101979501
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC101979501
subclass of: SO_0000673
so part of: LOC101979501
location: 3085269..3085379
location: region:3085269-3085379:1
so has part: feature:3085269-3085379:1:exon

position:3085269:1
position: 3085269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085269-3085379:1:exon

LOC101979789
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4503291..4506468)
location: region:4503291-4506468:-1
so has part: feature:4503291-4506468:-1:exon
subclass of: SO_0000010

101979789
type: Gene
SIO_000068: ncbigene

position:4503291:-1
position: 4503291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4506468:-1
position: 4506468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4503291-4506468:-1:exon

LOC101979789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101979789
product: oogenesin-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005361820.3
SIO_010081: LOC101979789
subclass of: SO_0000673
so part of: LOC101979789
location: complement(join(4503291..4503961,4506182..4506468))
location: region:4503291-4506468:-1
so has part: feature:4506182-4506468:-1:exon
so has part: feature:4503291-4503961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4506182-4506468:-1:exon

position:4506182:-1
position: 4506182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4503291-4503961:-1:exon

position:4503961:-1
position: 4503961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101979789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101979789
product: oogenesin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026786806.1
SIO_010081: LOC101979789
subclass of: SO_0000673
so part of: LOC101979789
location: complement(join(4503291..4503961,4504965..4505549,4506182..4506468))
location: region:4503291-4506468:-1
so has part: feature:4506182-4506468:-1:exon
so has part: feature:4504965-4505549:-1:exon
so has part: feature:4503291-4503961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4506182-4506468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504965-4505549:-1:exon

position:4504965:-1
position: 4504965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4505549:-1
position: 4505549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4503291-4503961:-1:exon

LOC101979789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101979789
product: oogenesin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005361819.3
SIO_010081: LOC101979789
subclass of: SO_0000673
so part of: LOC101979789
location: complement(join(4503291..4503961,4504965..4505552,4506182..4506468))
location: region:4503291-4506468:-1
so has part: feature:4506182-4506468:-1:exon
so has part: feature:4504965-4505552:-1:exon
so has part: feature:4503291-4503961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4506182-4506468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504965-4505552:-1:exon

position:4505552:-1
position: 4505552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4503291-4503961:-1:exon

LOC101979789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101979789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oogenesin-1-like isoform X3
translation: MSGQDPPTLLHLAVQSLLRDEALAISALQCLPRVLFPPLFKEAFNHGQSNILRAMVAVWPFSFLPVGTLMKTSHLETLQAVLDGVDMLRTQKVLPRYLKTPLETLSITVCKLSQLDLNSLSQSQSLHQLKHLNLRLVKLIDLYPTPFRDLLNSVAGTLQTLELEGCWMVDSQLITLLPALSQCSQLTRVNFYDNDISMAVLKDLLYHTANLNQLIQELYPAPLECYDDRGDVRVGRFAQLCPELMDTLITVRQPKRVSFATHMCHKCCQRCIYDLETRLCHCWQ
SIO_010081: LOC101979789
subclass of: SO_0000673
so part of: LOC101979789
location: complement(join(4503394..4503961,4506182..4506468))
location: region:4503394-4506468:-1
so has part: feature:4506182-4506468:-1:exon
so has part: feature:4503394-4503961:-1:exon

XP_005361877.1
type: Protein
SIO_000068: ncbiprotein

position:4503394:-1
position: 4503394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4506182-4506468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4503394-4503961:-1:exon

LOC101979789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101979789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRAME family member 8-like isoform X2
translation: MSGQDPPTLLHLAVQSLLRDEALAISALQCLPRVLFPPLFKEAFNHGQSNILRAMVAVWPFSFLPVGTLMKTSHLETLQAVLDGVDMLRTQKVLPRGKLQVLDLRNVQHNFWDVWAGTEDGECSAEAVGKKPAVKRSPRYALRQRLKVVADLCLRFHLNEQQTYLLQWAQQRRSFIRLCCVKMQIWALPVYTVRKVLMVFQPDSIQELELNTGWSLSTLVHFVSYLDQMRNLQKLLLTRIHKNTFKVLNTPSDIQKCITKFVSQFSKLNCLQHLSMNGVYFSSEHMKQLFRYLKTPLETLSITVCKLSQLDLNSLSQSQSLHQLKHLNLRLVKLIDLYPTPFRDLLNSVAGTLQTLELEGCWMVDSQLITLLPALSQCSQLTRVNFYDNDISMAVLKDLLYHTANLNQLIQELYPAPLECYDDRGDVRVGRFAQLCPELMDTLITVRQPKRVSFATHMCHKCCQRCIYDLETRLCHCWQ
SIO_010081: LOC101979789
subclass of: SO_0000673
so part of: LOC101979789
location: complement(join(4503394..4503961,4504965..4505549,4506182..4506468))
location: region:4503394-4506468:-1
so has part: feature:4506182-4506468:-1:exon
so has part: feature:4504965-4505549:-1:exon
so has part: feature:4503394-4503961:-1:exon

XP_026642607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4506182-4506468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504965-4505549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4503394-4503961:-1:exon

LOC101979789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101979789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRAME family member 8-like isoform X1
translation: MSGQDPPTLLHLAVQSLLRDEALAISALQCLPRVLFPPLFKEAFNHGQSNILRAMVAVWPFSFLPVGTLMKTSHLETLQAVLDGVDMLRTQKVLPRRGKLQVLDLRNVQHNFWDVWAGTEDGECSAEAVGKKPAVKRSPRYALRQRLKVVADLCLRFHLNEQQTYLLQWAQQRRSFIRLCCVKMQIWALPVYTVRKVLMVFQPDSIQELELNTGWSLSTLVHFVSYLDQMRNLQKLLLTRIHKNTFKVLNTPSDIQKCITKFVSQFSKLNCLQHLSMNGVYFSSEHMKQLFRYLKTPLETLSITVCKLSQLDLNSLSQSQSLHQLKHLNLRLVKLIDLYPTPFRDLLNSVAGTLQTLELEGCWMVDSQLITLLPALSQCSQLTRVNFYDNDISMAVLKDLLYHTANLNQLIQELYPAPLECYDDRGDVRVGRFAQLCPELMDTLITVRQPKRVSFATHMCHKCCQRCIYDLETRLCHCWQ
SIO_010081: LOC101979789
subclass of: SO_0000673
so part of: LOC101979789
location: complement(join(4503394..4503961,4504965..4505552,4506182..4506468))
location: region:4503394-4506468:-1
so has part: feature:4506182-4506468:-1:exon
so has part: feature:4504965-4505552:-1:exon
so has part: feature:4503394-4503961:-1:exon

XP_005361876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4506182-4506468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504965-4505552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4503394-4503961:-1:exon

Ralyl
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4670323..5451937
location: region:4670323-5451937:1
so has part: feature:4670323-5451937:1:exon
subclass of: SO_0000010

101980267
type: Gene
SIO_000068: ncbigene

position:4670323:1
position: 4670323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5451937:1
position: 5451937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4670323-5451937:1:exon

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005361821.2
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(4670323..4670522,5023175..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451937)
location: region:4670323-5451937:1
so has part: feature:4670323-4670522:1:exon
so has part: feature:5023175-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4670323-4670522:1:exon

position:4670522:1
position: 4670522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5023175-5023453:1:exon

position:5023175:1
position: 5023175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5023453:1
position: 5023453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5278267-5278342:1:exon

position:5278267:1
position: 5278267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5278342:1
position: 5278342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5311717-5311749:1:exon

position:5311717:1
position: 5311717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5311749:1
position: 5311749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5346601-5346648:1:exon

position:5346601:1
position: 5346601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5346648:1
position: 5346648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5358517-5358680:1:exon

position:5358517:1
position: 5358517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5358680:1
position: 5358680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5382598-5382711:1:exon

position:5382598:1
position: 5382598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5382711:1
position: 5382711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5395254-5395426:1:exon

position:5395254:1
position: 5395254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5395426:1
position: 5395426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5451000-5451937:1:exon

position:5451000:1
position: 5451000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005361822.2
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(4670416..4670522,4671262..4671356,5023175..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451937)
location: region:4670416-5451937:1
so has part: feature:4670416-4670522:1:exon
so has part: feature:4671262-4671356:1:exon
so has part: feature:5023175-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451937:1:exon

position:4670416:1
position: 4670416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4670416-4670522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4671262-4671356:1:exon

position:4671262:1
position: 4671262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4671356:1
position: 4671356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5023175-5023453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5451000-5451937:1:exon

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026786636.1
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(4671447..4671554,5023175..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451937)
location: region:4671447-5451937:1
so has part: feature:4671447-4671554:1:exon
so has part: feature:5023175-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451937:1:exon

position:4671447:1
position: 4671447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4671447-4671554:1:exon

position:4671554:1
position: 4671554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5023175-5023453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5451000-5451937:1:exon

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_026786635.1
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(4671565..4672033,5023175..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451937)
location: region:4671565-5451937:1
so has part: feature:4671565-4672033:1:exon
so has part: feature:5023175-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451937:1:exon

position:4671565:1
position: 4671565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4671565-4672033:1:exon

position:4672033:1
position: 4672033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5023175-5023453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5451000-5451937:1:exon

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_026786637.1
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(4671565..4672033,5023175..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5451000..5451937)
location: region:4671565-5451937:1
so has part: feature:4671565-4672033:1:exon
so has part: feature:5023175-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5451000-5451937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4671565-4672033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023175-5023453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451937:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X3
translation: MVTCTGAHLGLMRGLLQGLKQGEPTMTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKIDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAVSTDKVI
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(4671982..4672033,5023175..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5451000..5451022)
location: region:4671982-5451022:1
so has part: feature:4671982-4672033:1:exon
so has part: feature:5023175-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5451000-5451022:1:exon

XP_026642438.1
type: Protein
SIO_000068: ncbiprotein

position:4671982:1
position: 4671982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5451022:1
position: 5451022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4671982-4672033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023175-5023453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451022:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MVTCTGAHLGLMRGLLQGLKQGEPTMTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKIDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAEAQKKQLEASIELTQDECVSENADHSTEEPAEGGHEADGGEMTDGVEEDFDEDGGHELFLQIK
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(4671982..4672033,5023175..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451017)
location: region:4671982-5451017:1
so has part: feature:4671982-4672033:1:exon
so has part: feature:5023175-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451017:1:exon

XP_026642436.1
type: Protein
SIO_000068: ncbiprotein

position:5451017:1
position: 5451017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4671982-4672033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023175-5023453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5451000-5451017:1:exon

LOC101981396
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4893589..4895248
location: region:4893589-4895248:1
so has part: feature:4893589-4895248:1:exon

101981396
type: Gene
SIO_000068: ncbigene

position:4893589:1
position: 4893589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4895248:1
position: 4895248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4893589-4895248:1:exon

LOC101981396
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981396
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981396
subclass of: SO_0000673
so part of: LOC101981396
location: 4893589..4894575
location: region:4893589-4894575:1
so has part: feature:4893589-4894575:1:exon

position:4894575:1
position: 4894575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4893589-4894575:1:exon

LOC101981396
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981396
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981396
subclass of: SO_0000673
so part of: LOC101981396
location: 4894950..4895248
location: region:4894950-4895248:1
so has part: feature:4894950-4895248:1:exon

position:4894950:1
position: 4894950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4894950-4895248:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X2
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKIDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAEAQKKQLEASIELTQDECVSENADHSTEEPAEGGHEADGGEMTDGVEEDFDEDGGHELFLQIK
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5023198..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451017)
location: region:5023198-5451017:1
so has part: feature:5023198-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451017:1:exon

XP_026642437.1
type: Protein
SIO_000068: ncbiprotein

position:5023198:1
position: 5023198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5023198-5023453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451017:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X2
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKIDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAEAQKKQLEASIELTQDECVSENADHSTEEPAEGGHEADGGEMTDGVEEDFDEDGGHELFLQIK
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5023198..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451017)
location: region:5023198-5451017:1
so has part: feature:5023198-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451017:1:exon

XP_005361878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5023198-5023453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451017:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X2
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKIDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAEAQKKQLEASIELTQDECVSENADHSTEEPAEGGHEADGGEMTDGVEEDFDEDGGHELFLQIK
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5023198..5023453,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451017)
location: region:5023198-5451017:1
so has part: feature:5023198-5023453:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451017:1:exon

XP_005361879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5023198-5023453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451017:1:exon

LOC101981111
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5140954..5142371
location: region:5140954-5142371:1
so has part: feature:5140954-5142371:1:exon

101981111
type: Gene
SIO_000068: ncbigene

position:5140954:1
position: 5140954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5142371:1
position: 5142371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5140954-5142371:1:exon

LOC101981111
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981111
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981111
subclass of: SO_0000673
so part of: LOC101981111
location: 5140954..5142371
location: region:5140954-5142371:1
so has part: feature:5140954-5142371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5140954-5142371:1:exon

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005361823.2
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5196354..5196509,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451937)
location: region:5196354-5451937:1
so has part: feature:5196354-5196509:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451937:1:exon

position:5196354:1
position: 5196354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5196354-5196509:1:exon

position:5196509:1
position: 5196509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451937:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X4
translation: MTMYRSKRRHQRYINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAEAQKKQLEASIELTQDECVSENADHSTEEPAEGGHEADGGEMTDGVEEDFDEDGGHELFLQIK
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5196473..5196509,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451017)
location: region:5196473-5451017:1
so has part: feature:5196473-5196509:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451017:1:exon

XP_005361880.1
type: Protein
SIO_000068: ncbiprotein

position:5196473:1
position: 5196473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5196473-5196509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451017:1:exon

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026786638.1
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5236369..5236385,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451937)
location: region:5236369-5451937:1
so has part: feature:5236369-5236385:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451937:1:exon

position:5236369:1
position: 5236369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5236369-5236385:1:exon

position:5236385:1
position: 5236385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451937:1:exon

Ralyl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ralyl
product: RALY RNA binding protein like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026786639.1
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5271706..5271722,5278267..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451937)
location: region:5271706-5451937:1
so has part: feature:5271706-5271722:1:exon
so has part: feature:5278267-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451937:1:exon

position:5271706:1
position: 5271706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5271706-5271722:1:exon

position:5271722:1
position: 5271722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5278267-5278342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5451000-5451937:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X5
translation: MAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAEAQKKQLEASIELTQDECVSENADHSTEEPAEGGHEADGGEMTDGVEEDFDEDGGHELFLQIK
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5278275..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451017)
location: region:5278275-5451017:1
so has part: feature:5278275-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451017:1:exon

XP_026642439.1
type: Protein
SIO_000068: ncbiprotein

position:5278275:1
position: 5278275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5278275-5278342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5451000-5451017:1:exon

Ralyl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ralyl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X5
translation: MAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVGGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKTEAEAQKKQLEASIELTQDECVSENADHSTEEPAEGGHEADGGEMTDGVEEDFDEDGGHELFLQIK
SIO_010081: Ralyl
subclass of: SO_0000673
so part of: Ralyl
location: join(5278275..5278342,5311717..5311749,5346601..5346648,5358517..5358680,5382598..5382711,5395254..5395426,5451000..5451017)
location: region:5278275-5451017:1
so has part: feature:5278275-5278342:1:exon
so has part: feature:5311717-5311749:1:exon
so has part: feature:5346601-5346648:1:exon
so has part: feature:5358517-5358680:1:exon
so has part: feature:5382598-5382711:1:exon
so has part: feature:5395254-5395426:1:exon
so has part: feature:5451000-5451017:1:exon

XP_026642440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5278275-5278342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5311717-5311749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5346601-5346648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5358517-5358680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5382598-5382711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5395254-5395426:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5451000-5451017:1:exon

LOC101988751
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101988751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5590141..5624555
location: region:5590141-5624555:1
so has part: feature:5590141-5624555:1:exon
subclass of: SO_0000010

101988751
type: Gene
SIO_000068: ncbigene

position:5590141:1
position: 5590141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5624555:1
position: 5624555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5590141-5624555:1:exon

LOC101988751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101988751
product: solute carrier family 7 member 13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_005361846.1
SIO_010081: LOC101988751
subclass of: SO_0000673
so part of: LOC101988751
location: join(5590141..5590807,5617901..5618032,5619523..5619884,5624310..5624555)
location: region:5590141-5624555:1
so has part: feature:5590141-5590807:1:exon
so has part: feature:5617901-5618032:1:exon
so has part: feature:5619523-5619884:1:exon
so has part: feature:5624310-5624555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5590141-5590807:1:exon

position:5590807:1
position: 5590807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5617901-5618032:1:exon

position:5617901:1
position: 5617901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5618032:1
position: 5618032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5619523-5619884:1:exon

position:5619523:1
position: 5619523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5619884:1
position: 5619884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5624310-5624555:1:exon

position:5624310:1
position: 5624310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101988751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101988751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 7 member 13-like
translation: MQLLRVVGLIHANMLLLSSTIGAGIFVTPKAVLMYSSLNIPVCLSIWALGGLLSMMNALCLAELATTFPVSGASYFFLKKTLGSSAAFLSLWIKRFVHLLSIGAQSLLIASYLIQPFYSGCPAPELPKKCLALAALLSFGILSAQQMKTVVQFQTISSLMKVAILSLISVTGIVLLVIGKNENVSRFKNVLDAELPDASQFVEAFLQVYYSYLGASLLINIAGEIKSPTNTIPKSLMSGLSIVILIYLLTNISYLTVLSPQEIISSDSSAITWMNRVVPSTQWAISLGISVSLMNTISCGILSASRIFYCASQDGKLPFIYSMLNEHHSPVVAVFMIIILSSISIITSNLIYLVKYVGLGTWCINLMNMIGLLKIRFQKPDLPGPYKVWLPFIFGSIALSVFLIFTPMIQSPNIEHVYQVVFLFCGLLCYWLQTHLKRYDVCFDKITCYWQLFFNVSPSENQDKLINF
SIO_010081: LOC101988751
subclass of: SO_0000673
so part of: LOC101988751
location: join(5590141..5590807,5617901..5618032,5619523..5619884,5624310..5624555)
location: region:5590141-5624555:1
so has part: feature:5590141-5590807:1:exon
so has part: feature:5617901-5618032:1:exon
so has part: feature:5619523-5619884:1:exon
so has part: feature:5624310-5624555:1:exon

XP_005361903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5590141-5590807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5617901-5618032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5619523-5619884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5624310-5624555:1:exon

LOC106144199
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5632590..5636304
location: region:5632590-5636304:1
so has part: feature:5632590-5636304:1:exon
subclass of: SO_0000010

106144199
type: Gene
SIO_000068: ncbigene

position:5632590:1
position: 5632590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5636304:1
position: 5636304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5632590-5636304:1:exon

LOC106144199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC106144199
product: trypsin V-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_013351754.1
SIO_010081: LOC106144199
subclass of: SO_0000673
so part of: LOC106144199
location: join(5632590..5632604,5635380..5635425,5635485..5635630,5636155..5636304)
location: region:5632590-5636304:1
so has part: feature:5632590-5632604:1:exon
so has part: feature:5635380-5635425:1:exon
so has part: feature:5635485-5635630:1:exon
so has part: feature:5636155-5636304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5632590-5632604:1:exon

position:5632604:1
position: 5632604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5635380-5635425:1:exon

position:5635380:1
position: 5635380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5635425:1
position: 5635425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5635485-5635630:1:exon

position:5635485:1
position: 5635485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5635630:1
position: 5635630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5636155-5636304:1:exon

position:5636155:1
position: 5636155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106144199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC106144199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trypsin V-A-like
translation: MILEENQKKLRKPVKDTLMKKSAAEIPSLLQCLDAPVLSDSVCHKAYPRRITSNMFCLGFLEGGKDSCQMDSGGPVVCNGKLQGVVSWGTGCAQKGKPGVYTKVCNYLNWIHQTISEN
SIO_010081: LOC106144199
subclass of: SO_0000673
so part of: LOC106144199
location: join(5632590..5632604,5635380..5635425,5635485..5635630,5636155..5636304)
location: region:5632590-5636304:1
so has part: feature:5632590-5632604:1:exon
so has part: feature:5635380-5635425:1:exon
so has part: feature:5635485-5635630:1:exon
so has part: feature:5636155-5636304:1:exon

XP_013207208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5632590-5632604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5635380-5635425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5635485-5635630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5636155-5636304:1:exon

LOC101989020
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101989020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5645931..5670725)
location: region:5645931-5670725:-1
so has part: feature:5645931-5670725:-1:exon
subclass of: SO_0000010

101989020
type: Gene
SIO_000068: ncbigene

position:5645931:-1
position: 5645931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5670725:-1
position: 5670725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5645931-5670725:-1:exon

LOC101989020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101989020
product: solute carrier family 7 member 13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_005361847.1
SIO_010081: LOC101989020
subclass of: SO_0000673
so part of: LOC101989020
location: complement(join(5645931..5646185,5653718..5654079,5658385..5658516,5670059..5670725))
location: region:5645931-5670725:-1
so has part: feature:5670059-5670725:-1:exon
so has part: feature:5658385-5658516:-1:exon
so has part: feature:5653718-5654079:-1:exon
so has part: feature:5645931-5646185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5670059-5670725:-1:exon

position:5670059:-1
position: 5670059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5658385-5658516:-1:exon

position:5658385:-1
position: 5658385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5658516:-1
position: 5658516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5653718-5654079:-1:exon

position:5653718:-1
position: 5653718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5654079:-1
position: 5654079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5645931-5646185:-1:exon

position:5646185:-1
position: 5646185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101989020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101989020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 7 member 13-like
translation: MQLLRAIGFFHGYMFLLSSVIGAGIFVAPKGVLKFSSLNIPVCLSIWAVCALLSMMCALCLAELGTTFPVSSAPYYFLKRSLGSSFAFCSLWIKLFGYSLGLGAQSLLIASYLLQPFYVGCPAPELPKKCLALAILWSIGILNARGLTNVFWFNSISNLLKMGVLCLIILTGIVLLVTGKKENVSRFENALDADLPVASEIVEAILQAFYAYMGSSLLVNVAGEVENPSETIPKSLIFGLPVIAVTYILTNVSYLAVLTPQEIIASDSVAVTWMNRVSPSMQWVVSLAISVSIMNNTGCGVLSASRVFYSASQEGQLPLIYSMLNDHHCPVVAITQIIILSSLAIIPLNLIYVVKYLGLTYVIGNGLNMIALLKLRYKDPDLPRPYKVWLPLVFGSIVLSLILLLIPVIKSPTLDRFYEVTIFCSGLPFYWIHLLLKKYAGAFDKITCYLQLLFNVSPGEDHDKCFSTKKN
SIO_010081: LOC101989020
subclass of: SO_0000673
so part of: LOC101989020
location: complement(join(5645931..5646185,5653718..5654079,5658385..5658516,5670059..5670725))
location: region:5645931-5670725:-1
so has part: feature:5670059-5670725:-1:exon
so has part: feature:5658385-5658516:-1:exon
so has part: feature:5653718-5654079:-1:exon
so has part: feature:5645931-5646185:-1:exon

XP_005361904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5670059-5670725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5658385-5658516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5653718-5654079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5645931-5646185:-1:exon

Lrrcc1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lrrcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5807281..5855366
location: region:5807281-5855366:1
so has part: feature:5807281-5855366:1:exon
subclass of: SO_0000010

101981659
type: Gene
SIO_000068: ncbigene

position:5807281:1
position: 5807281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5855366:1
position: 5855366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807281-5855366:1:exon

Lrrcc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrcc1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005361828.2
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807281..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5855114..5855366)
location: region:5807281-5855366:1
so has part: feature:5807281-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5855114-5855366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5807281-5807475:1:exon

position:5807475:1
position: 5807475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

position:5810713:1
position: 5810713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5810918:1
position: 5810918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

position:5811223:1
position: 5811223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5811288:1
position: 5811288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

position:5811977:1
position: 5811977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5812144:1
position: 5812144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

position:5813818:1
position: 5813818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5813993:1
position: 5813993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

position:5814092:1
position: 5814092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5814301:1
position: 5814301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5815473-5815669:1:exon

position:5815473:1
position: 5815473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5815669:1
position: 5815669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5817150-5817297:1:exon

position:5817150:1
position: 5817150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5817297:1
position: 5817297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5818018-5818166:1:exon

position:5818018:1
position: 5818018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5818166:1
position: 5818166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5829561-5829765:1:exon

position:5829561:1
position: 5829561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5829765:1
position: 5829765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5830708-5830847:1:exon

position:5830708:1
position: 5830708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5830847:1
position: 5830847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5831596-5831797:1:exon

position:5831596:1
position: 5831596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5831797:1
position: 5831797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5832687-5832872:1:exon

position:5832687:1
position: 5832687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5832872:1
position: 5832872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5833643-5833817:1:exon

position:5833643:1
position: 5833643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5833817:1
position: 5833817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5834528-5834691:1:exon

position:5834528:1
position: 5834528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5834691:1
position: 5834691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5835374-5835582:1:exon

position:5835374:1
position: 5835374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5835582:1
position: 5835582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5835668-5835805:1:exon

position:5835668:1
position: 5835668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5835805:1
position: 5835805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5836483-5836618:1:exon

position:5836483:1
position: 5836483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5836618:1
position: 5836618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5855114-5855366:1:exon

position:5855114:1
position: 5855114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lrrcc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrcc1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005361825.2
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807281..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846597)
location: region:5807281-5846597:1
so has part: feature:5807281-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846597:1:exon

position:5846597:1
position: 5846597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807281-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5845902-5846597:1:exon

position:5845902:1
position: 5845902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lrrcc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrcc1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026786626.1
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807281..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846597)
location: region:5807281-5846597:1
so has part: feature:5807281-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5807281-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5845902-5846597:1:exon

Lrrcc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrcc1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_026786625.1
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807281..5807475,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846597)
location: region:5807281-5846597:1
so has part: feature:5807281-5807475:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5807281-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5845902-5846597:1:exon

Lrrcc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrcc1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_026786627.1
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807281..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5834853..5835054)
location: region:5807281-5835054:1
so has part: feature:5807281-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5834853-5835054:1:exon

position:5835054:1
position: 5835054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807281-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5834853-5835054:1:exon

position:5834853:1
position: 5834853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lrrcc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X2
translation: MEAAVDAEVEPEDGDSSCADVCFMDKGLQSISELSLDSSLHAINLHCNNISKITSIDHIWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVEGLEALVNLTRLNLSYNNINDLSGLMPLHGLKYKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKDGEGNPICLVPGYRAIILQTLPQLRILDCKNIFGEPVNLEEINSSRLQCFEGLLDNLVSSDSPLNISEDEVVDSMPMAAPPMDVLPPLEQFTSTPEDNVLTSLLSVCPSSEPEKINHENDFQNEMKLQKLDDQILQLLNETSNSLIDNVPEKDLGPKRDADITSESDYGNRKEYSRKIPRRTKIPYYARTIQTIKHHNKNNGAFVSCNRKMRQPYLKDLYVRSSLVNCNVLRDLDEQKTDIIKVDKSVSDDNTYRSLLEQLDQEREMRWKAEQAEKKLMDYIDELLKQASEKKDVHSLALITTDRLKDVIFKERHSKAQLEIIVHRLQNEVKKLTIELMKAQDQQEDHIRHLRTLEKALEKMEKQKAQQQQAQMRLIQEVELKASAADREINLLRTSLHQEKEQVQQLHELLALKEEEHRKEIETRAFFSDAEFQDALAKEMSKEERKHEQEVKEYQEKIDILNQQYLDLENEFRIALTVEARRFKDVQDGFEDVATELAKSKHALIWAQRKENESSSLIKDLTCMVKEQKTKLSEVSKLKQEAAANLQNQINTLEILIEDDKQKSIQIEILKHEKTQLISELAAKESLIYGLRTERKVWGHELAHQGSSLAQSRGKLEAQIESLCRENESLRKSHESDCDALRIKCKIIEDQTETIRKLKDCLQEKDDQVKLLQEKITFIEKCTQEQLSEKCSQLDNVIEKLERHNERKEKLKQQLKTKELELEEIRKAYSTLNQKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSLELQKDALEKLQSMDDAFKKQVDAIVEAHQAEIIQLTNEKQKYIECANLKGDCARAD
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807387..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5855114..5855137)
location: region:5807387-5855137:1
so has part: feature:5807387-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5855114-5855137:1:exon

XP_005361885.1
type: Protein
SIO_000068: ncbiprotein

position:5807387:1
position: 5807387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5855137:1
position: 5855137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807387-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5855114-5855137:1:exon

Lrrcc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1
translation: MEAAVDAEVEPEDGDSSCADVCFMDKGLQSISELSLDSSLHAINLHCNNISKITSIDHIWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVEGLEALVNLTRLNLSYNNINDLSGLMPLHGLKYKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKDGEGNPICLVPGYRAIILQTLPQLRILDCKNIFGEPVNLEEINSSRLQCFEGLLDNLVSSDSPLNISEDEVVDSMPMAAPPMDVLPPLEQFTSTPEDNVLTSLLSVCPSSEPEKINHENDFQNEMKLQKLDDQILQLLNETSNSLIDNVPEKDLGPKRDADITSESDYGNRKEYSRKIPRRTKIPYYARTIQTIKHHNKNNGAFVSCNRKMRQPYLKDLYVRSSLVNCNVLRDLDEQKTDIIKVDKSVSDDNTYRSLLEQLDQEREMRWKAEQAEKKLMDYIDELLKQASEKKDVHSLALITTDRLKDVIFKERHSKAQLEIIVHRLQNEVKKLTIELMKAQDQQEDHIRHLRTLEKALEKMEKQKAQQQQAQMRLIQEVELKASAADREINLLRTSLHQEKEQVQQLHELLALKEEEHRKEIETRAFFSDAEFQDALAKEMSKEERKHEQEVKEYQEKIDILNQQYLDLENEFRIALTVEARRFKDVQDGFEDVATELAKSKHALIWAQRKENESSSLIKDLTCMVKEQKTKLSEVSKLKQEAAANLQNQINTLEILIEDDKQKSIQIEILKHEKTQLISELAAKESLIYGLRTERKVWGHELAHQGSSLAQSRGKLEAQIESLCRENESLRKSHESDCDALRIKCKIIEDQTETIRKLKDCLQEKDDQVKLLQEKITFIEKCTQEQLSEKCSQLDNVIEKLERHNERKEKLKQQLKTKELELEEIRKAYSTLNQKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSLELQKDALEKLQSMDDAFKKQVDAIVEAHQAEIIQLTNEKQKYIECANLKVQQVEEEMRGLLEETCKNKKIMEGKIKQLACALSEIQKEM
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807387..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846024)
location: region:5807387-5846024:1
so has part: feature:5807387-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846024:1:exon

XP_005361882.1
type: Protein
SIO_000068: ncbiprotein

position:5846024:1
position: 5846024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807387-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5845902-5846024:1:exon

Lrrcc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X4
translation: MEAAVDAEVEPEDGDSSCADVCFMDKGLQSISELSLDSSLHAINLHCNNISKITSIDHIWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVEGLEALVNLTRLNLSYNNINDLSGLMPLHGLKYKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKDGEGNPICLVPGYRAIILQTLPQLRILDCKNIFGEPVNLEEINSSRLQCFEGLLDNLVSSDSPLNISEDEVVDSMPMAAPPMDVLPPLEQFTSTPEDNVLTSLLSVCPSSEPEKINHENDFQNEMKLQKLDDQILQLLNESLLEQLDQEREMRWKAEQAEKKLMDYIDELLKQASEKKDVHSLALITTDRLKDVIFKERHSKAQLEIIVHRLQNEVKKLTIELMKAQDQQEDHIRHLRTLEKALEKMEKQKAQQQQAQMRLIQEVELKASAADREINLLRTSLHQEKEQVQQLHELLALKEEEHRKEIETRAFFSDAEFQDALAKEMSKEERKHEQEVKEYQEKIDILNQQYLDLENEFRIALTVEARRFKDVQDGFEDVATELAKSKHALIWAQRKENESSSLIKDLTCMVKEQKTKLSEVSKLKQEAAANLQNQINTLEILIEDDKQKSIQIEILKHEKTQLISELAAKESLIYGLRTERKVWGHELAHQGSSLAQSRGKLEAQIESLCRENESLRKSHESDCDALRIKCKIIEDQTETIRKLKDCLQEKDDQVKLLQEKITFIEKCTQEQLSEKCSQLDNVIEKLERHNERKEKLKQQLKTKELELEEIRKAYSTLNQKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSLELQKDALEKLQSMDDAFKKQVDAIVEAHQAEIIQLTNEKQKYIECANLKVQQVEEEMRGLLEETCKNKKIMEGKIKQLACALSEIQKEM
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807387..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846024)
location: region:5807387-5846024:1
so has part: feature:5807387-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846024:1:exon

XP_026642427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5807387-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5845902-5846024:1:exon

Lrrcc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X5
translation: MEAAVDAEVEPEDGDSSCADVCFMDKGLQSISELSLDSSLHAINLHCNNISKITSIDHIWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVEGLEALVNLTRLNLSYNNINDLSGLMPLHGLKYKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKDGEGNPICLVPGYRAIILQTLPQLRILDCKNIFGEPVNLEEINSSRLQCFEGLLDNLVSSDSPLNISEDEVVDSMPMAAPPMDVLPPLEQFTSTPEDNVLTSLLSVCPSSEPEKINHENDFQNEMKLQKLDDQILQLLNETSNSLIDNVPEKDLGPKRDADITSESDYGNRKEYSRKIPRRTKIPYYARTIQTIKHHNKNNGAFVSCNRKMRQPYLKDLYVRSSLVNCNVLRDLDEQKTDIIKVDKSVSDDNTYRSLLEQLDQEREMRWKAEQAEKKLMDYIDELLKQASEKKDVHSLALITTDRLKDVIFKERHSKAQLEIIVHRLQNEVKKLTIELMKAQDQQEDHIRHLRTLEKALEKMEKQKAQQQQAQMRLIQEVELKASAADREINLLRTSLHQEKEQVQQLHELLALKEEEHRKEIETRAFFSDAEFQDALAKEMSKEERKHEQEVKEYQEKIDILNQQYLDLENEFRIALTVEARRFKDVQDGFEDVATELAKSKHALIWAQRKENESSSLIKDLTCMVKEQKTKLSEVSKLKQEAAANLQNQINTLEILIEDDKQKSIQIEILKHEKTQLISELAAKESLIYGLRTERKVWGHELAHQGSSLAQSRGKLEAQIESLCRENESLRKSHESDCDALRIKCKIIEDQTETIRKLKDLWSPFWNSICRPDRPRPHRDPPVSAS
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807387..5807475,5810713..5810918,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5834853..5834933)
location: region:5807387-5834933:1
so has part: feature:5807387-5807475:1:exon
so has part: feature:5810713-5810918:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5834853-5834933:1:exon

XP_026642428.1
type: Protein
SIO_000068: ncbiprotein

position:5834933:1
position: 5834933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807387-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810713-5810918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5834853-5834933:1:exon

Lrrcc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X3
translation: MQKSNLRMATAAARTCASWTKACRGLEALVNLTRLNLSYNNINDLSGLMPLHGLKYKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKDGEGNPICLVPGYRAIILQTLPQLRILDCKNIFGEPVNLEEINSSRLQCFEGLLDNLVSSDSPLNISEDEVVDSMPMAAPPMDVLPPLEQFTSTPEDNVLTSLLSVCPSSEPEKINHENDFQNEMKLQKLDDQILQLLNETSNSLIDNVPEKDLGPKRDADITSESDYGNRKEYSRKIPRRTKIPYYARTIQTIKHHNKNNGAFVSCNRKMRQPYLKDLYVRSSLVNCNVLRDLDEQKTDIIKVDKSVSDDNTYRSLLEQLDQEREMRWKAEQAEKKLMDYIDELLKQASEKKDVHSLALITTDRLKDVIFKERHSKAQLEIIVHRLQNEVKKLTIELMKAQDQQEDHIRHLRTLEKALEKMEKQKAQQQQAQMRLIQEVELKASAADREINLLRTSLHQEKEQVQQLHELLALKEEEHRKEIETRAFFSDAEFQDALAKEMSKEERKHEQEVKEYQEKIDILNQQYLDLENEFRIALTVEARRFKDVQDGFEDVATELAKSKHALIWAQRKENESSSLIKDLTCMVKEQKTKLSEVSKLKQEAAANLQNQINTLEILIEDDKQKSIQIEILKHEKTQLISELAAKESLIYGLRTERKVWGHELAHQGSSLAQSRGKLEAQIESLCRENESLRKSHESDCDALRIKCKIIEDQTETIRKLKDCLQEKDDQVKLLQEKITFIEKCTQEQLSEKCSQLDNVIEKLERHNERKEKLKQQLKTKELELEEIRKAYSTLNQKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSLELQKDALEKLQSMDDAFKKQVDAIVEAHQAEIIQLTNEKQKYIECANLKVQQVEEEMRGLLEETCKNKKIMEGKIKQLACALSEIQKEM
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5807403..5807475,5811223..5811288,5811977..5812144,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846024)
location: region:5807403-5846024:1
so has part: feature:5807403-5807475:1:exon
so has part: feature:5811223-5811288:1:exon
so has part: feature:5811977-5812144:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846024:1:exon

XP_026642426.1
type: Protein
SIO_000068: ncbiprotein

position:5807403:1
position: 5807403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807403-5807475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5811223-5811288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5811977-5812144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5845902-5846024:1:exon

Lrrcc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrcc1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026786628.1
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5813134..5813174,5813818..5813993,5814092..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846597)
location: region:5813134-5846597:1
so has part: feature:5813134-5813174:1:exon
so has part: feature:5813818-5813993:1:exon
so has part: feature:5814092-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846597:1:exon

position:5813134:1
position: 5813134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5813134-5813174:1:exon

position:5813174:1
position: 5813174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5813818-5813993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5814092-5814301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5845902-5846597:1:exon

Lrrcc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X6
translation: MPMAAPPMDVLPPLEQFTSTPEDNVLTSLLSVCPSSEPEKINHENDFQNEMKLQKLDDQILQLLNETSNSLIDNVPEKDLGPKRDADITSESDYGNRKEYSRKIPRRTKIPYYARTIQTIKHHNKNNGAFVSCNRKMRQPYLKDLYVRSSLVNCNVLRDLDEQKTDIIKVDKSVSDDNTYRSLLEQLDQEREMRWKAEQAEKKLMDYIDELLKQASEKKDVHSLALITTDRLKDVIFKERHSKAQLEIIVHRLQNEVKKLTIELMKAQDQQEDHIRHLRTLEKALEKMEKQKAQQQQAQMRLIQEVELKASAADREINLLRTSLHQEKEQVQQLHELLALKEEEHRKEIETRAFFSDAEFQDALAKEMSKEERKHEQEVKEYQEKIDILNQQYLDLENEFRIALTVEARRFKDVQDGFEDVATELAKSKHALIWAQRKENESSSLIKDLTCMVKEQKTKLSEVSKLKQEAAANLQNQINTLEILIEDDKQKSIQIEILKHEKTQLISELAAKESLIYGLRTERKVWGHELAHQGSSLAQSRGKLEAQIESLCRENESLRKSHESDCDALRIKCKIIEDQTETIRKLKDCLQEKDDQVKLLQEKITFIEKCTQEQLSEKCSQLDNVIEKLERHNERKEKLKQQLKTKELELEEIRKAYSTLNQKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSLELQKDALEKLQSMDDAFKKQVDAIVEAHQAEIIQLTNEKQKYIECANLKVQQVEEEMRGLLEETCKNKKIMEGKIKQLACALSEIQKEM
SIO_010081: Lrrcc1
subclass of: SO_0000673
so part of: Lrrcc1
location: join(5814104..5814301,5815473..5815669,5817150..5817297,5818018..5818166,5829561..5829765,5830708..5830847,5831596..5831797,5832687..5832872,5833643..5833817,5834528..5834691,5835374..5835582,5835668..5835805,5836483..5836618,5845902..5846024)
location: region:5814104-5846024:1
so has part: feature:5814104-5814301:1:exon
so has part: feature:5815473-5815669:1:exon
so has part: feature:5817150-5817297:1:exon
so has part: feature:5818018-5818166:1:exon
so has part: feature:5829561-5829765:1:exon
so has part: feature:5830708-5830847:1:exon
so has part: feature:5831596-5831797:1:exon
so has part: feature:5832687-5832872:1:exon
so has part: feature:5833643-5833817:1:exon
so has part: feature:5834528-5834691:1:exon
so has part: feature:5835374-5835582:1:exon
so has part: feature:5835668-5835805:1:exon
so has part: feature:5836483-5836618:1:exon
so has part: feature:5845902-5846024:1:exon

XP_026642429.1
type: Protein
SIO_000068: ncbiprotein

position:5814104:1
position: 5814104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5814104-5814301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5815473-5815669:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5817150-5817297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5818018-5818166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5829561-5829765:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5830708-5830847:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5831596-5831797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5832687-5832872:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5833643-5833817:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5834528-5834691:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5835374-5835582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5835668-5835805:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5836483-5836618:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5845902-5846024:1:exon

E2f5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: E2f5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5862722..5872642
location: region:5862722-5872642:1
so has part: feature:5862722-5872642:1:exon
subclass of: SO_0000010

101983732
type: Gene
SIO_000068: ncbigene

position:5862722:1
position: 5862722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5872642:1
position: 5872642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5862722-5872642:1:exon

E2f5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: E2f5
product: E2F transcription factor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005361835.3
SIO_010081: E2f5
subclass of: SO_0000673
so part of: E2f5
location: join(5862722..5865018,5866134..5866295,5867979..5868022,5868967..5869031,5869899..5870166,5871569..5871613,5871949..5872642)
location: region:5862722-5872642:1
so has part: feature:5862722-5865018:1:exon
so has part: feature:5866134-5866295:1:exon
so has part: feature:5867979-5868022:1:exon
so has part: feature:5868967-5869031:1:exon
so has part: feature:5869899-5870166:1:exon
so has part: feature:5871569-5871613:1:exon
so has part: feature:5871949-5872642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5862722-5865018:1:exon

position:5865018:1
position: 5865018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5866134-5866295:1:exon

position:5866134:1
position: 5866134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5866295:1
position: 5866295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5867979-5868022:1:exon

position:5867979:1
position: 5867979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5868022:1
position: 5868022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5868967-5869031:1:exon

position:5868967:1
position: 5868967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5869031:1
position: 5869031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5869899-5870166:1:exon

position:5869899:1
position: 5869899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5870166:1
position: 5870166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5871569-5871613:1:exon

position:5871569:1
position: 5871569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5871613:1
position: 5871613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5871949-5872642:1:exon

position:5871949:1
position: 5871949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

E2f5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: E2f5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5
translation: MLQIYLVNVLRRLSGSYLGQSPLSGFIYTWYFLCSFFPKQAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRFLKAEIEDLELKERELDQQKLWLQQSIKNVMEDPINNRFSYVTHEDICDCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQSSSQSSTSGTPQKSTMAAQNMPEQQVSERSQSFQPIPATEISSGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2f5
subclass of: SO_0000673
so part of: E2f5
location: join(5864789..5865018,5866134..5866295,5867979..5868022,5868967..5869031,5869899..5870166,5871569..5871613,5871949..5872058)
location: region:5864789-5872058:1
so has part: feature:5864789-5865018:1:exon
so has part: feature:5866134-5866295:1:exon
so has part: feature:5867979-5868022:1:exon
so has part: feature:5868967-5869031:1:exon
so has part: feature:5869899-5870166:1:exon
so has part: feature:5871569-5871613:1:exon
so has part: feature:5871949-5872058:1:exon

XP_005361892.1
type: Protein
SIO_000068: ncbiprotein

position:5864789:1
position: 5864789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5872058:1
position: 5872058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5864789-5865018:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5866134-5866295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5867979-5868022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5868967-5869031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5869899-5870166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5871569-5871613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5871949-5872058:1:exon

LG5H8orf59
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LG5H8orf59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5870178..5877066)
location: region:5870178-5877066:-1
so has part: feature:5870178-5877066:-1:exon
subclass of: SO_0000010

101982516
type: Gene
SIO_000068: ncbigene

position:5870178:-1
position: 5870178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5877066:-1
position: 5877066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5870178-5877066:-1:exon

LG5H8orf59
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG5H8orf59
product: linkage group 5 C8orf59 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005361834.3
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5870178..5871209,5872986..5873102,5875361..5875477,5876763..5876890))
location: region:5870178-5876890:-1
so has part: feature:5876763-5876890:-1:exon
so has part: feature:5875361-5875477:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5870178-5871209:-1:exon

position:5876890:-1
position: 5876890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876763-5876890:-1:exon

position:5876763:-1
position: 5876763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5875361-5875477:-1:exon

position:5875361:-1
position: 5875361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5875477:-1
position: 5875477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5872986-5873102:-1:exon

position:5872986:-1
position: 5872986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5873102:-1
position: 5873102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5870178-5871209:-1:exon

position:5871209:-1
position: 5871209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LG5H8orf59
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG5H8orf59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf59 homolog isoform X2
translation: MAKNKLKGQKSRNVFHIASQKTFKAKNKAKPVTTNLKKINIMNDEKVNRMNRAFVNIQKELASFSKSLSLKSVQKELS
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5871204..5871209,5872986..5873102,5875361..5875474))
location: region:5871204-5875474:-1
so has part: feature:5875361-5875474:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5871204-5871209:-1:exon

XP_005361891.1
type: Protein
SIO_000068: ncbiprotein

position:5871204:-1
position: 5871204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5875474:-1
position: 5875474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5875361-5875474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5871204-5871209:-1:exon

LG5H8orf59
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG5H8orf59
product: linkage group 5 C8orf59 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026786705.1
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872626..5872735,5872986..5873102,5875361..5875477,5877046..5877066))
location: region:5872626-5877066:-1
so has part: feature:5877046-5877066:-1:exon
so has part: feature:5875361-5875477:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872626-5872735:-1:exon

position:5872626:-1
position: 5872626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5877046-5877066:-1:exon

position:5877046:-1
position: 5877046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5875361-5875477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5872626-5872735:-1:exon

position:5872735:-1
position: 5872735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LG5H8orf59
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG5H8orf59
product: linkage group 5 C8orf59 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_005361829.2
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872626..5872735,5872986..5873102,5875361..5875477,5876763..5876924))
location: region:5872626-5876924:-1
so has part: feature:5876763-5876924:-1:exon
so has part: feature:5875361-5875477:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872626-5872735:-1:exon

position:5876924:-1
position: 5876924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876763-5876924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5875361-5875477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5872626-5872735:-1:exon

LG5H8orf59
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG5H8orf59
product: linkage group 5 C8orf59 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005361830.2
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872626..5872735,5872986..5873102,5875361..5875477,5876830..5876850))
location: region:5872626-5876850:-1
so has part: feature:5876830-5876850:-1:exon
so has part: feature:5875361-5875477:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872626-5872735:-1:exon

position:5876850:-1
position: 5876850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876830-5876850:-1:exon

position:5876830:-1
position: 5876830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5875361-5875477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5872626-5872735:-1:exon

LG5H8orf59
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG5H8orf59
product: linkage group 5 C8orf59 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_013351764.2
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872626..5872735,5872986..5873102,5875361..5875477,5876605..5876750))
location: region:5872626-5876750:-1
so has part: feature:5876605-5876750:-1:exon
so has part: feature:5875361-5875477:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872626-5872735:-1:exon

position:5876750:-1
position: 5876750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876605-5876750:-1:exon

position:5876605:-1
position: 5876605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5875361-5875477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5872626-5872735:-1:exon

LG5H8orf59
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG5H8orf59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf59 homolog isoform X1
translation: MAKNKLKGQKSRNVFHIASQKTFKAKNKAKPVTTNLKKINIMNDEKVNRMNRAFVNIQKELASFSKSLSLKSVQKELKHHENEPANVDEATRLMAQL
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872673..5872735,5872986..5873102,5875361..5875474))
location: region:5872673-5875474:-1
so has part: feature:5875361-5875474:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872673-5872735:-1:exon

XP_026642506.1
type: Protein
SIO_000068: ncbiprotein

position:5872673:-1
position: 5872673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5875361-5875474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872673-5872735:-1:exon

LG5H8orf59
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG5H8orf59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf59 homolog isoform X1
translation: MAKNKLKGQKSRNVFHIASQKTFKAKNKAKPVTTNLKKINIMNDEKVNRMNRAFVNIQKELASFSKSLSLKSVQKELKHHENEPANVDEATRLMAQL
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872673..5872735,5872986..5873102,5875361..5875474))
location: region:5872673-5875474:-1
so has part: feature:5875361-5875474:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872673-5872735:-1:exon

XP_005361886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5875361-5875474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872673-5872735:-1:exon

LG5H8orf59
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG5H8orf59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf59 homolog isoform X1
translation: MAKNKLKGQKSRNVFHIASQKTFKAKNKAKPVTTNLKKINIMNDEKVNRMNRAFVNIQKELASFSKSLSLKSVQKELKHHENEPANVDEATRLMAQL
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872673..5872735,5872986..5873102,5875361..5875474))
location: region:5872673-5875474:-1
so has part: feature:5875361-5875474:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872673-5872735:-1:exon

XP_005361887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5875361-5875474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872673-5872735:-1:exon

LG5H8orf59
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG5H8orf59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf59 homolog isoform X1
translation: MAKNKLKGQKSRNVFHIASQKTFKAKNKAKPVTTNLKKINIMNDEKVNRMNRAFVNIQKELASFSKSLSLKSVQKELKHHENEPANVDEATRLMAQL
SIO_010081: LG5H8orf59
subclass of: SO_0000673
so part of: LG5H8orf59
location: complement(join(5872673..5872735,5872986..5873102,5875361..5875474))
location: region:5872673-5875474:-1
so has part: feature:5875361-5875474:-1:exon
so has part: feature:5872986-5873102:-1:exon
so has part: feature:5872673-5872735:-1:exon

XP_013207218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5875361-5875474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5872986-5873102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5872673-5872735:-1:exon

Ca13
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ca13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5926608..5951642
location: region:5926608-5951642:1
so has part: feature:5926608-5951642:1:exon
subclass of: SO_0000010

101984028
type: Gene
SIO_000068: ncbigene

position:5926608:1
position: 5926608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5951642:1
position: 5951642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5926608-5951642:1:exon

Ca13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ca13
product: carbonic anhydrase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005361836.3
SIO_010081: Ca13
subclass of: SO_0000673
so part of: Ca13
location: join(5926608..5926664,5928175..5928372,5935531..5935649,5941170..5941265,5942555..5942617,5943229..5943384,5949542..5951642)
location: region:5926608-5951642:1
so has part: feature:5926608-5926664:1:exon
so has part: feature:5928175-5928372:1:exon
so has part: feature:5935531-5935649:1:exon
so has part: feature:5941170-5941265:1:exon
so has part: feature:5942555-5942617:1:exon
so has part: feature:5943229-5943384:1:exon
so has part: feature:5949542-5951642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5926608-5926664:1:exon

position:5926664:1
position: 5926664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5928175-5928372:1:exon

position:5928175:1
position: 5928175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5928372:1
position: 5928372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5935531-5935649:1:exon

position:5935531:1
position: 5935531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5935649:1
position: 5935649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5941170-5941265:1:exon

position:5941170:1
position: 5941170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5941265:1
position: 5941265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5942555-5942617:1:exon

position:5942555:1
position: 5942555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5942617:1
position: 5942617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5943229-5943384:1:exon

position:5943229:1
position: 5943229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5943384:1
position: 5943384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5949542-5951642:1:exon

position:5949542:1
position: 5949542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ca13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ca13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 13
translation: MARLSWGYGEHNGPIHWNQFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPASAKIISNSGHSFNVDFDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADDHGSEHMVDGVRYAAELHVVHWNSDKYPSFVEAAHESDGLAVLGIFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNFDPLSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLARFRSLLCSAEGETAAFLLSNHRPPQPLKGRRVRASFY
SIO_010081: Ca13
subclass of: SO_0000673
so part of: Ca13
location: join(5926628..5926664,5928175..5928372,5935531..5935649,5941170..5941265,5942555..5942617,5943229..5943384,5949542..5949661)
location: region:5926628-5949661:1
so has part: feature:5926628-5926664:1:exon
so has part: feature:5928175-5928372:1:exon
so has part: feature:5935531-5935649:1:exon
so has part: feature:5941170-5941265:1:exon
so has part: feature:5942555-5942617:1:exon
so has part: feature:5943229-5943384:1:exon
so has part: feature:5949542-5949661:1:exon

XP_005361893.1
type: Protein
SIO_000068: ncbiprotein

position:5926628:1
position: 5926628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5949661:1
position: 5949661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5926628-5926664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5928175-5928372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5935531-5935649:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5941170-5941265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5942555-5942617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5943229-5943384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5949542-5949661:1:exon

LOC101984320
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5996905..5998586
location: region:5996905-5998586:1
so has part: feature:5996905-5998586:1:exon

101984320
type: Gene
SIO_000068: ncbigene

position:5996905:1
position: 5996905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5998586:1
position: 5998586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5996905-5998586:1:exon

LOC101984320
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984320
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984320
subclass of: SO_0000673
so part of: LOC101984320
location: 5996905..5998586
location: region:5996905-5998586:1
so has part: feature:5996905-5998586:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5996905-5998586:1:exon

Ca1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ca1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6010659..6018245)
location: region:6010659-6018245:-1
so has part: feature:6010659-6018245:-1:exon
subclass of: SO_0000010

101984594
type: Gene
SIO_000068: ncbigene

position:6010659:-1
position: 6010659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6018245:-1
position: 6018245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6010659-6018245:-1:exon

Ca1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ca1
product: carbonic anhydrase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_013351757.1
SIO_010081: Ca1
subclass of: SO_0000673
so part of: Ca1
location: complement(join(6010659..6010775,6011546..6011701,6013560..6013622,6013755..6013850,6016118..6016236,6018209..6018245))
location: region:6010659-6018245:-1
so has part: feature:6018209-6018245:-1:exon
so has part: feature:6016118-6016236:-1:exon
so has part: feature:6013755-6013850:-1:exon
so has part: feature:6013560-6013622:-1:exon
so has part: feature:6011546-6011701:-1:exon
so has part: feature:6010659-6010775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6018209-6018245:-1:exon

position:6018209:-1
position: 6018209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6016118-6016236:-1:exon

position:6016118:-1
position: 6016118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6016236:-1
position: 6016236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6013755-6013850:-1:exon

position:6013755:-1
position: 6013755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6013850:-1
position: 6013850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6013560-6013622:-1:exon

position:6013560:-1
position: 6013560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6013622:-1
position: 6013622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6011546-6011701:-1:exon

position:6011546:-1
position: 6011546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6011701:-1
position: 6011701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6010659-6010775:-1:exon

position:6010775:-1
position: 6010775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ca1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ca1
product: carbonic anhydrase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005361837.3
SIO_010081: Ca1
subclass of: SO_0000673
so part of: Ca1
location: complement(join(6010659..6010775,6011546..6011701,6013560..6013622,6013755..6013850,6016118..6016236,6017585..6017782,6018209..6018245))
location: region:6010659-6018245:-1
so has part: feature:6018209-6018245:-1:exon
so has part: feature:6017585-6017782:-1:exon
so has part: feature:6016118-6016236:-1:exon
so has part: feature:6013755-6013850:-1:exon
so has part: feature:6013560-6013622:-1:exon
so has part: feature:6011546-6011701:-1:exon
so has part: feature:6010659-6010775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6018209-6018245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017585-6017782:-1:exon

position:6017585:-1
position: 6017585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6017782:-1
position: 6017782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6016118-6016236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6013755-6013850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6013560-6013622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6011546-6011701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6010659-6010775:-1:exon

Ca1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ca1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 1 isoform X2
translation: MASADWGYDAKNVLKGGPLSDTYRLVQFHFHWGNSNDHGSEHTVDGVKYSGELHIVHWNSAKYSSAAEAISKADGLAILGVLVKVGPTNPNLQKVLDALNSVKTKGKRAPFTNFDPSCLLPSSRDYWTYFGSLTHPPLHESVTWFILKESITASPEQLAQLRSVLSNAEGEADVPILSNHRPTQPLKGRTVTASF
SIO_010081: Ca1
subclass of: SO_0000673
so part of: Ca1
location: complement(join(6010659..6010775,6011546..6011701,6013560..6013622,6013755..6013850,6016118..6016236,6018209..6018245))
location: region:6010659-6018245:-1
so has part: feature:6018209-6018245:-1:exon
so has part: feature:6016118-6016236:-1:exon
so has part: feature:6013755-6013850:-1:exon
so has part: feature:6013560-6013622:-1:exon
so has part: feature:6011546-6011701:-1:exon
so has part: feature:6010659-6010775:-1:exon

XP_013207211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6018209-6018245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6016118-6016236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6013755-6013850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6013560-6013622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6011546-6011701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6010659-6010775:-1:exon

Ca1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ca1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 1 isoform X1
translation: MASADWGYDAKNGPDQWSKLYPIANGNNQSPVDIKTSEVKHDTSLKPISVTYNPATSKEIVNVGHSFQVVFDDSGNQSVLKGGPLSDTYRLVQFHFHWGNSNDHGSEHTVDGVKYSGELHIVHWNSAKYSSAAEAISKADGLAILGVLVKVGPTNPNLQKVLDALNSVKTKGKRAPFTNFDPSCLLPSSRDYWTYFGSLTHPPLHESVTWFILKESITASPEQLAQLRSVLSNAEGEADVPILSNHRPTQPLKGRTVTASF
SIO_010081: Ca1
subclass of: SO_0000673
so part of: Ca1
location: complement(join(6010659..6010775,6011546..6011701,6013560..6013622,6013755..6013850,6016118..6016236,6017585..6017782,6018209..6018245))
location: region:6010659-6018245:-1
so has part: feature:6018209-6018245:-1:exon
so has part: feature:6017585-6017782:-1:exon
so has part: feature:6016118-6016236:-1:exon
so has part: feature:6013755-6013850:-1:exon
so has part: feature:6013560-6013622:-1:exon
so has part: feature:6011546-6011701:-1:exon
so has part: feature:6010659-6010775:-1:exon

XP_005361894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6018209-6018245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017585-6017782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6016118-6016236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6013755-6013850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6013560-6013622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6011546-6011701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6010659-6010775:-1:exon

Ca3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ca3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6114344..6122201
location: region:6114344-6122201:1
so has part: feature:6114344-6122201:1:exon
subclass of: SO_0000010

101985070
type: Gene
SIO_000068: ncbigene

position:6114344:1
position: 6114344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6122201:1
position: 6122201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114344-6122201:1:exon

Ca3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ca3
product: carbonic anhydrase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005361839.3
SIO_010081: Ca3
subclass of: SO_0000673
so part of: Ca3
location: join(6114344..6114468,6115106..6115303,6117485..6117603,6118915..6119007,6119789..6119851,6120618..6120773,6121455..6122201)
location: region:6114344-6122201:1
so has part: feature:6114344-6114468:1:exon
so has part: feature:6115106-6115303:1:exon
so has part: feature:6117485-6117603:1:exon
so has part: feature:6118915-6119007:1:exon
so has part: feature:6119789-6119851:1:exon
so has part: feature:6120618-6120773:1:exon
so has part: feature:6121455-6122201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6114344-6114468:1:exon

position:6114468:1
position: 6114468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6115106-6115303:1:exon

position:6115106:1
position: 6115106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6115303:1
position: 6115303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6117485-6117603:1:exon

position:6117485:1
position: 6117485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117603:1
position: 6117603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6118915-6119007:1:exon

position:6118915:1
position: 6118915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6119007:1
position: 6119007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6119789-6119851:1:exon

position:6119789:1
position: 6119789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6119851:1
position: 6119851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6120618-6120773:1:exon

position:6120618:1
position: 6120618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6120773:1
position: 6120773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6121455-6122201:1:exon

position:6121455:1
position: 6121455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ca3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ca3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 3
translation: MAKEWGYASHNGPEHWHELYPIAKGDKQSPIELHTKDIRHDPSLQPWSASYDPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPKYNTFGEALKQPDGIAVVGIFLKIGREKGEFQFILDALDKIKTKGKEAPFTHFDPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFASAENEPPVPLVGNWRPPQPIKGRVVRASFK
SIO_010081: Ca3
subclass of: SO_0000673
so part of: Ca3
location: join(6114435..6114468,6115106..6115303,6117485..6117603,6118915..6119007,6119789..6119851,6120618..6120773,6121455..6121574)
location: region:6114435-6121574:1
so has part: feature:6114435-6114468:1:exon
so has part: feature:6115106-6115303:1:exon
so has part: feature:6117485-6117603:1:exon
so has part: feature:6118915-6119007:1:exon
so has part: feature:6119789-6119851:1:exon
so has part: feature:6120618-6120773:1:exon
so has part: feature:6121455-6121574:1:exon

XP_005361896.1
type: Protein
SIO_000068: ncbiprotein

position:6114435:1
position: 6114435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6121574:1
position: 6121574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114435-6114468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6115106-6115303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6117485-6117603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6118915-6119007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6119789-6119851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6120618-6120773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6121455-6121574:1:exon

Ca2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ca2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6139595..6154719
location: region:6139595-6154719:1
so has part: feature:6139595-6154719:1:exon
subclass of: SO_0000010

101985358
type: Gene
SIO_000068: ncbigene

position:6139595:1
position: 6139595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6154719:1
position: 6154719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6139595-6154719:1:exon

Ca2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ca2
product: carbonic anhydrase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005361840.3
SIO_010081: Ca2
subclass of: SO_0000673
so part of: Ca2
location: join(6139595..6140060,6141150..6141347,6147861..6147979,6148409..6148501,6149685..6149747,6150891..6151046,6153969..6154719)
location: region:6139595-6154719:1
so has part: feature:6139595-6140060:1:exon
so has part: feature:6141150-6141347:1:exon
so has part: feature:6147861-6147979:1:exon
so has part: feature:6148409-6148501:1:exon
so has part: feature:6149685-6149747:1:exon
so has part: feature:6150891-6151046:1:exon
so has part: feature:6153969-6154719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6139595-6140060:1:exon

position:6140060:1
position: 6140060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6141150-6141347:1:exon

position:6141150:1
position: 6141150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6141347:1
position: 6141347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6147861-6147979:1:exon

position:6147861:1
position: 6147861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6147979:1
position: 6147979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6148409-6148501:1:exon

position:6148409:1
position: 6148409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6148501:1
position: 6148501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6149685-6149747:1:exon

position:6149685:1
position: 6149685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6149747:1
position: 6149747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6150891-6151046:1:exon

position:6150891:1
position: 6150891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6151046:1
position: 6151046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6153969-6154719:1:exon

position:6153969:1
position: 6153969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ca2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ca2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 2
translation: MSHHWGYSGHNGPEHWYKDFPIANGERQSPVDIDTNTAQYDSALQPLSVCYDQATSKKILNNGHSFNVEFDDSQDCSVLKGGPLNGTYRLIQFHFHWGSSDGHGSEHTVNKTKYAAELHLVHWNTKYGDFGKAAQQPDGLAVLGIFLKIGPATQGLQKVLDALSAIKTKGKSAAFTNFDPRSLLPGNFDYWTYPGSLTTPPLLECVTWIVLKEPITVSSEQMSQFRRLNFNTEGEPEELMVDNWRPAQPLKNRKIKASFK
SIO_010081: Ca2
subclass of: SO_0000673
so part of: Ca2
location: join(6140027..6140060,6141150..6141347,6147861..6147979,6148409..6148501,6149685..6149747,6150891..6151046,6153969..6154088)
location: region:6140027-6154088:1
so has part: feature:6140027-6140060:1:exon
so has part: feature:6141150-6141347:1:exon
so has part: feature:6147861-6147979:1:exon
so has part: feature:6148409-6148501:1:exon
so has part: feature:6149685-6149747:1:exon
so has part: feature:6150891-6151046:1:exon
so has part: feature:6153969-6154088:1:exon

XP_005361897.1
type: Protein
SIO_000068: ncbiprotein

position:6140027:1
position: 6140027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6154088:1
position: 6154088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6140027-6140060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6141150-6141347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6147861-6147979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6148409-6148501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6149685-6149747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6150891-6151046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6153969-6154088:1:exon

LOC101985635
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101985635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6313902..6314671)
location: region:6313902-6314671:-1
so has part: feature:6313902-6314671:-1:exon

101985635
type: Gene
SIO_000068: ncbigene

position:6313902:-1
position: 6313902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6314671:-1
position: 6314671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6313902-6314671:-1:exon

LOC101985635
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101985635
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101985635
subclass of: SO_0000673
so part of: LOC101985635
location: complement(6313902..6314671)
location: region:6313902-6314671:-1
so has part: feature:6313902-6314671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6313902-6314671:-1:exon

LOC113457795
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457795
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6350678..6350803
location: region:6350678-6350803:1
so has part: feature:6350678-6350803:1:exon
subclass of: SO_0000623

113457795
type: Gene
SIO_000068: ncbigene

position:6350678:1
position: 6350678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6350803:1
position: 6350803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6350678-6350803:1:exon

LOC113457795
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457795
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378288.1
SIO_010081: LOC113457795
subclass of: SO_0000673
so part of: LOC113457795
location: 6350678..6350803
location: region:6350678-6350803:1
so has part: feature:6350678-6350803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6350678-6350803:1:exon

LOC101985919
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101985919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6616488..6617335)
location: region:6616488-6617335:-1
so has part: feature:6616488-6617335:-1:exon

101985919
type: Gene
SIO_000068: ncbigene

position:6616488:-1
position: 6616488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6617335:-1
position: 6617335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6616488-6617335:-1:exon

LOC101985919
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101985919
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101985919
subclass of: SO_0000673
so part of: LOC101985919
location: complement(6616488..6617335)
location: region:6616488-6617335:-1
so has part: feature:6616488-6617335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6616488-6617335:-1:exon

LOC106144200
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6648960..6649515
location: region:6648960-6649515:1
so has part: feature:6648960-6649515:1:exon

106144200
type: Gene
SIO_000068: ncbigene

position:6648960:1
position: 6648960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6649515:1
position: 6649515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6648960-6649515:1:exon

LOC106144200
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144200
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106144200
subclass of: SO_0000673
so part of: LOC106144200
location: 6648960..6649515
location: region:6648960-6649515:1
so has part: feature:6648960-6649515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6648960-6649515:1:exon

LOC101986204
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101986204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6822566..6867754
location: region:6822566-6867754:1
so has part: feature:6822566-6867754:1:exon

101986204
type: Gene
SIO_000068: ncbigene

position:6822566:1
position: 6822566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6867754:1
position: 6867754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6822566-6867754:1:exon

LOC101986204
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101986204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101986204
subclass of: SO_0000673
so part of: LOC101986204
location: 6822566..6822679
location: region:6822566-6822679:1
so has part: feature:6822566-6822679:1:exon

position:6822679:1
position: 6822679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6822566-6822679:1:exon

LOC101986204
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101986204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101986204
subclass of: SO_0000673
so part of: LOC101986204
location: 6862737..6862863
location: region:6862737-6862863:1
so has part: feature:6862737-6862863:1:exon

position:6862737:1
position: 6862737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6862863:1
position: 6862863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6862737-6862863:1:exon

LOC101986204
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101986204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101986204
subclass of: SO_0000673
so part of: LOC101986204
location: 6863063..6863123
location: region:6863063-6863123:1
so has part: feature:6863063-6863123:1:exon

position:6863063:1
position: 6863063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6863123:1
position: 6863123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6863063-6863123:1:exon

LOC101986204
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101986204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101986204
subclass of: SO_0000673
so part of: LOC101986204
location: 6864283..6864808
location: region:6864283-6864808:1
so has part: feature:6864283-6864808:1:exon

position:6864283:1
position: 6864283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6864808:1
position: 6864808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6864283-6864808:1:exon

LOC101986204
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101986204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101986204
subclass of: SO_0000673
so part of: LOC101986204
location: 6864911..6867754
location: region:6864911-6867754:1
so has part: feature:6864911-6867754:1:exon

position:6864911:1
position: 6864911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6864911-6867754:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 79684
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 6978819..6978918
location: region:6978819-6978918:1
so has part: feature:6978819-6978918:1:region

position:6978819:1
position: 6978819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6978918:1
position: 6978918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6978819-6978918:1:region

LOC101990271
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101990271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7316126..7318572
location: region:7316126-7318572:1
so has part: feature:7316126-7318572:1:exon
subclass of: SO_0000010

101990271
type: Gene
SIO_000068: ncbigene

position:7316126:1
position: 7316126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7318572:1
position: 7318572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7316126-7318572:1:exon

LOC101990271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101990271
product: chromosome alignment-maintaining phosphoprotein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013351766.2
SIO_010081: LOC101990271
subclass of: SO_0000673
so part of: LOC101990271
location: 7316126..7318572
location: region:7316126-7318572:1
so has part: feature:7316126-7318572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7316126-7318572:1:exon

LOC101990271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101990271
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:7318049..7318051,aa:OTHER)
product: LOW QUALITY PROTEIN: chromosome alignment-maintaining phosphoprotein 1-like
translation: MEVCQEPHKPSLSLDCDHCGFRGTDYENVQIHMGSIHPEFCDDMDAGGLGKMIFYQKSAKLFHCHQCFFTSKMYSNVYYHITAKHAASEKWRNKPKDQLSKETETMESPSLPEHQSTALDPAEGRPTPALPMETQKIGPSLSPEPQKSVPPALEPEDSGPVVSPEQQAPCLPAEASKTASVSSPECVDPASMVSELQKPAPASPESVKSALVSSKPQKHSPFADTGAPPSTLSPESPVLDTSPEPCGPSLTASPESRKPTRTASPEPRKPSPSESPELWKPFPAVTSEPRRPTPAVSPGSWKPGPPGSPRPWKSSPSATSGPWKSSKPAPSLSPEPWKPIPSVSPGPWKPAPSVSTASWKSSVSSGSWKTTPTSPESWKSGPPELRKTALALSPEHWKAVPPVSPELHKPGPPLSPEIRSLAGSSELRKPSGSPDLWKLSPDQRKSSSASLDFPESQKSSRGSPDIWKSSFITESQKPSVFPETRKHPSGSPEPPKVASDIWKPVLSLDAEARKSTLFPEPTKAVLPASPEPRKHALFPEPWNHVLFPELPKSAVISNAQKATELADELQLEAVDDAAKCDSLVQEGLLAAPKKLLEDALFPPSTKLKKDSQENSYAELSSSEYLRTDXDAIDIKGQDSSSDQEQMDVESIDFGKENKMEMSSPEQSKNVLQFTEEKEAFISEEEIAKYMKRGKGKYYCKICCCRAMKKGAVLHHLVNKHNVHSPYKCTICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSQFNEEANKKLMEALESPLEEPQM
SIO_010081: LOC101990271
subclass of: SO_0000673
so part of: LOC101990271
location: 7316165..7318567
location: region:7316165-7318567:1
so has part: feature:7316165-7318567:1:exon

XP_013207220.1
type: Protein
SIO_000068: ncbiprotein

position:7316165:1
position: 7316165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7318567:1
position: 7318567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7316165-7318567:1:exon

Il7
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Il7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7427870..7467319
location: region:7427870-7467319:1
so has part: feature:7427870-7467319:1:exon
subclass of: SO_0000010

101992993
type: Gene
SIO_000068: ncbigene

position:7427870:1
position: 7427870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7467319:1
position: 7467319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7427870-7467319:1:exon

Il7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Il7
product: interleukin 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026786830.1
SIO_010081: Il7
subclass of: SO_0000673
so part of: Il7
location: join(7427870..7427895,7434011..7434144,7443401..7443403,7464247..7464327,7465344..7465475,7467212..7467319)
location: region:7427870-7467319:1
so has part: feature:7427870-7427895:1:exon
so has part: feature:7434011-7434144:1:exon
so has part: feature:7443401-7443403:1:exon
so has part: feature:7464247-7464327:1:exon
so has part: feature:7465344-7465475:1:exon
so has part: feature:7467212-7467319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7427870-7427895:1:exon

position:7427895:1
position: 7427895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7434011-7434144:1:exon

position:7434011:1
position: 7434011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7434144:1
position: 7434144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7443401-7443403:1:exon

position:7443401:1
position: 7443401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7443403:1
position: 7443403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7464247-7464327:1:exon

position:7464247:1
position: 7464247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7464327:1
position: 7464327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7465344-7465475:1:exon

position:7465344:1
position: 7465344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7465475:1
position: 7465475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7467212-7467319:1:exon

position:7467212:1
position: 7467212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Il7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Il7
product: interleukin 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005361858.2
SIO_010081: Il7
subclass of: SO_0000673
so part of: Il7
location: join(7427870..7427895,7434011..7434144,7464247..7464327,7465344..7465475,7467212..7467319)
location: region:7427870-7467319:1
so has part: feature:7427870-7427895:1:exon
so has part: feature:7434011-7434144:1:exon
so has part: feature:7464247-7464327:1:exon
so has part: feature:7465344-7465475:1:exon
so has part: feature:7467212-7467319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7427870-7427895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7434011-7434144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7464247-7464327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7465344-7465475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7467212-7467319:1:exon

Il7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Il7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-7 isoform X2
translation: MFHVSFRYIFGIPPLILVLLPVTSSDCHIQDKEGKAYESVLMVSIDELLDKMTGNGNNCPNKEPNFFKKHPCDDAKEAAFLNRAARKLNQFLKMNISEEFNIHLLTVSQGTQTLVNCTSKEEKSPKDQKKNDPCFLKRLLREIKTCWNKILKGGI
SIO_010081: Il7
subclass of: SO_0000673
so part of: Il7
location: join(7427886..7427895,7434011..7434144,7443401..7443403,7464247..7464327,7465344..7465475,7467212..7467319)
location: region:7427886-7467319:1
so has part: feature:7427886-7427895:1:exon
so has part: feature:7434011-7434144:1:exon
so has part: feature:7443401-7443403:1:exon
so has part: feature:7464247-7464327:1:exon
so has part: feature:7465344-7465475:1:exon
so has part: feature:7467212-7467319:1:exon

XP_026642631.1
type: Protein
SIO_000068: ncbiprotein

position:7427886:1
position: 7427886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7427886-7427895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7434011-7434144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7443401-7443403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7464247-7464327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7465344-7465475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7467212-7467319:1:exon

Il7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Il7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-7 isoform X1
translation: MFHVSFRYIFGIPPLILVLLPVTSSDCHIQDKEGKAYESVLMVSIDELDKMTGNGNNCPNKEPNFFKKHPCDDAKEAAFLNRAARKLNQFLKMNISEEFNIHLLTVSQGTQTLVNCTSKEEKSPKDQKKNDPCFLKRLLREIKTCWNKILKGGI
SIO_010081: Il7
subclass of: SO_0000673
so part of: Il7
location: join(7427886..7427895,7434011..7434144,7464247..7464327,7465344..7465475,7467212..7467319)
location: region:7427886-7467319:1
so has part: feature:7427886-7427895:1:exon
so has part: feature:7434011-7434144:1:exon
so has part: feature:7464247-7464327:1:exon
so has part: feature:7465344-7465475:1:exon
so has part: feature:7467212-7467319:1:exon

XP_005361915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7427886-7427895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7434011-7434144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7464247-7464327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7465344-7465475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7467212-7467319:1:exon

Zc2hc1a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Zc2hc1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7477891..7515975)
location: region:7477891-7515975:-1
so has part: feature:7477891-7515975:-1:exon
subclass of: SO_0000010

101990554
type: Gene
SIO_000068: ncbigene

position:7477891:-1
position: 7477891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7515975:-1
position: 7515975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7477891-7515975:-1:exon

Zc2hc1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zc2hc1a
product: zinc finger C2HC-type containing 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005361850.3
SIO_010081: Zc2hc1a
subclass of: SO_0000673
so part of: Zc2hc1a
location: complement(join(7477891..7479870,7485139..7485246,7494045..7494144,7494534..7494627,7496224..7496372,7497936..7498077,7503795..7503911,7506160..7506236,7515884..7515975))
location: region:7477891-7515975:-1
so has part: feature:7515884-7515975:-1:exon
so has part: feature:7506160-7506236:-1:exon
so has part: feature:7503795-7503911:-1:exon
so has part: feature:7497936-7498077:-1:exon
so has part: feature:7496224-7496372:-1:exon
so has part: feature:7494534-7494627:-1:exon
so has part: feature:7494045-7494144:-1:exon
so has part: feature:7485139-7485246:-1:exon
so has part: feature:7477891-7479870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7515884-7515975:-1:exon

position:7515884:-1
position: 7515884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7506160-7506236:-1:exon

position:7506160:-1
position: 7506160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7506236:-1
position: 7506236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7503795-7503911:-1:exon

position:7503795:-1
position: 7503795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7503911:-1
position: 7503911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7497936-7498077:-1:exon

position:7497936:-1
position: 7497936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7498077:-1
position: 7498077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7496224-7496372:-1:exon

position:7496224:-1
position: 7496224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7496372:-1
position: 7496372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7494534-7494627:-1:exon

position:7494534:-1
position: 7494534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7494627:-1
position: 7494627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7494045-7494144:-1:exon

position:7494045:-1
position: 7494045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7494144:-1
position: 7494144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7485139-7485246:-1:exon

position:7485139:-1
position: 7485139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7485246:-1
position: 7485246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7477891-7479870:-1:exon

position:7479870:-1
position: 7479870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zc2hc1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zc2hc1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger C2HC domain-containing protein 1A
translation: MDGLEENGSVVQVGELLPCKICGRTFFPLALKKHGPICQKTATKKRKTFDSSRQRAEGTDIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSAEAKGKPASRPQYKPSPLKKSNSPGTAASSRLPQPSTASKAVVGVPSGKASSVNSSLGNKLQTLSPSHKAIAAPQAGANIKSRNTTPPSLARNSVAGVLTNKRKTYTDSFVARPDGDCTSSFNGGNIKGVEGNSSGHLPKFCHECGTKYPVEWAKFCCECGIRRMIL
SIO_010081: Zc2hc1a
subclass of: SO_0000673
so part of: Zc2hc1a
location: complement(join(7479705..7479870,7485139..7485246,7494045..7494144,7494534..7494627,7496224..7496372,7497936..7498077,7503795..7503911,7506160..7506236,7515884..7515899))
location: region:7479705-7515899:-1
so has part: feature:7515884-7515899:-1:exon
so has part: feature:7506160-7506236:-1:exon
so has part: feature:7503795-7503911:-1:exon
so has part: feature:7497936-7498077:-1:exon
so has part: feature:7496224-7496372:-1:exon
so has part: feature:7494534-7494627:-1:exon
so has part: feature:7494045-7494144:-1:exon
so has part: feature:7485139-7485246:-1:exon
so has part: feature:7479705-7479870:-1:exon

XP_005361907.1
type: Protein
SIO_000068: ncbiprotein

position:7479705:-1
position: 7479705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7515899:-1
position: 7515899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7515884-7515899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7506160-7506236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7503795-7503911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7497936-7498077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7496224-7496372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7494534-7494627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7494045-7494144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7485139-7485246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7479705-7479870:-1:exon

Pkia
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pkia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7555078..7644850)
location: region:7555078-7644850:-1
so has part: feature:7555078-7644850:-1:exon
subclass of: SO_0000010

101990837
type: Gene
SIO_000068: ncbigene

position:7555078:-1
position: 7555078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7644850:-1
position: 7644850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7555078-7644850:-1:exon

Pkia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pkia
product: cAMP-dependent protein kinase inhibitor alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005361853.3
SIO_010081: Pkia
subclass of: SO_0000673
so part of: Pkia
location: complement(join(7555078..7558440,7561261..7561438,7644713..7644850))
location: region:7555078-7644850:-1
so has part: feature:7644713-7644850:-1:exon
so has part: feature:7561261-7561438:-1:exon
so has part: feature:7555078-7558440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7644713-7644850:-1:exon

position:7644713:-1
position: 7644713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7561261-7561438:-1:exon

position:7561261:-1
position: 7561261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7561438:-1
position: 7561438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7555078-7558440:-1:exon

position:7558440:-1
position: 7558440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pkia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pkia
product: cAMP-dependent protein kinase inhibitor alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_013351768.2
SIO_010081: Pkia
subclass of: SO_0000673
so part of: Pkia
location: complement(join(7555078..7558440,7561261..7561438,7592423..7592535,7644713..7644849))
location: region:7555078-7644849:-1
so has part: feature:7644713-7644849:-1:exon
so has part: feature:7592423-7592535:-1:exon
so has part: feature:7561261-7561438:-1:exon
so has part: feature:7555078-7558440:-1:exon

position:7644849:-1
position: 7644849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7644713-7644849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7592423-7592535:-1:exon

position:7592423:-1
position: 7592423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7592535:-1
position: 7592535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7561261-7561438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7555078-7558440:-1:exon

Pkia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pkia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-dependent protein kinase inhibitor alpha
translation: MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEDNGQRSSTEQSGEAQGEAAKSES
SIO_010081: Pkia
subclass of: SO_0000673
so part of: Pkia
location: complement(join(7558361..7558440,7561261..7561411))
location: region:7558361-7561411:-1
so has part: feature:7561261-7561411:-1:exon
so has part: feature:7558361-7558440:-1:exon

XP_005361910.1
type: Protein
SIO_000068: ncbiprotein

position:7558361:-1
position: 7558361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7561411:-1
position: 7561411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7561261-7561411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7558361-7558440:-1:exon

Pkia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pkia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-dependent protein kinase inhibitor alpha
translation: MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEDNGQRSSTEQSGEAQGEAAKSES
SIO_010081: Pkia
subclass of: SO_0000673
so part of: Pkia
location: complement(join(7558361..7558440,7561261..7561411))
location: region:7558361-7561411:-1
so has part: feature:7561261-7561411:-1:exon
so has part: feature:7558361-7558440:-1:exon

XP_013207222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7561261-7561411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7558361-7558440:-1:exon

LOC101993554
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101993554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8433283..8537050)
location: region:8433283-8537050:-1
so has part: feature:8433283-8537050:-1:exon

101993554
type: Gene
SIO_000068: ncbigene

position:8433283:-1
position: 8433283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8537050:-1
position: 8537050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8433283-8537050:-1:exon

LOC101993554
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101993554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101993554
subclass of: SO_0000673
so part of: LOC101993554
location: complement(8433283..8433420)
location: region:8433283-8433420:-1
so has part: feature:8433283-8433420:-1:exon

position:8433420:-1
position: 8433420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8433283-8433420:-1:exon

LOC101993554
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101993554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101993554
subclass of: SO_0000673
so part of: LOC101993554
location: complement(8535422..8537050)
location: region:8535422-8537050:-1
so has part: feature:8535422-8537050:-1:exon

position:8535422:-1
position: 8535422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8535422-8537050:-1:exon

LOC101993840
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101993840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8989741..8991999)
location: region:8989741-8991999:-1
so has part: feature:8989741-8991999:-1:exon

101993840
type: Gene
SIO_000068: ncbigene

position:8989741:-1
position: 8989741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8991999:-1
position: 8991999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8989741-8991999:-1:exon

LOC101993840
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101993840
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC101993840
subclass of: SO_0000673
so part of: LOC101993840
location: complement(8989741..8990930)
location: region:8989741-8990930:-1
so has part: feature:8989741-8990930:-1:exon

position:8990930:-1
position: 8990930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8989741-8990930:-1:exon

LOC101993840
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101993840
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC101993840
subclass of: SO_0000673
so part of: LOC101993840
location: complement(8991980..8991999)
location: region:8991980-8991999:-1
so has part: feature:8991980-8991999:-1:exon

position:8991980:-1
position: 8991980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8991980-8991999:-1:exon

Pex2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pex2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9084756..9099227
location: region:9084756-9099227:1
so has part: feature:9084756-9099227:1:exon
subclass of: SO_0000010

101991952
type: Gene
SIO_000068: ncbigene

position:9084756:1
position: 9084756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9099227:1
position: 9099227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9084756-9099227:1:exon

Pex2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pex2
product: peroxisomal biogenesis factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005361854.2
SIO_010081: Pex2
subclass of: SO_0000673
so part of: Pex2
location: join(9084756..9085414,9096081..9096192,9097972..9099227)
location: region:9084756-9099227:1
so has part: feature:9084756-9085414:1:exon
so has part: feature:9096081-9096192:1:exon
so has part: feature:9097972-9099227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9084756-9085414:1:exon

position:9085414:1
position: 9085414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9096081-9096192:1:exon

position:9096081:1
position: 9096081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9096192:1
position: 9096192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9097972-9099227:1:exon

position:9097972:1
position: 9097972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pex2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pex2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome biogenesis factor 2
translation: MAGREEKGKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLWLFLWRFTVYSRNATVGQSVLNIQYKNDFSSSPRYQPPSKNQKLWYAMCTIGGRWLEERCYDLFRNRHLASFGKVKQCMNFVVGLIKLGELINFLIFLQKGKFATLTERLLGIRSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGTVSDSALASSGKECALCGEWPTMPHTIGCDHVFCYYCVKSSFLFDMYFTCPKCGIEVHSVQPLKSGIEMSEVNAL
SIO_010081: Pex2
subclass of: SO_0000673
so part of: Pex2
location: 9097989..9098903
location: region:9097989-9098903:1
so has part: feature:9097989-9098903:1:exon

XP_005361911.1
type: Protein
SIO_000068: ncbiprotein

position:9097989:1
position: 9097989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9098903:1
position: 9098903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9097989-9098903:1:exon

Zfhx4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9234700..9428573)
location: region:9234700-9428573:-1
so has part: feature:9234700-9428573:-1:exon
subclass of: SO_0000010

101992231
type: Gene
SIO_000068: ncbigene

position:9234700:-1
position: 9234700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9428573:-1
position: 9428573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9234700-9428573:-1:exon

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013351767.2
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400846,9428554..9428573))
location: region:9234700-9428573:-1
so has part: feature:9428554-9428573:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9428554-9428573:-1:exon

position:9428554:-1
position: 9428554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9398214-9400846:-1:exon

position:9398214:-1
position: 9398214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9400846:-1
position: 9400846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9396864-9397366:-1:exon

position:9396864:-1
position: 9396864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9397366:-1
position: 9397366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9322607-9322838:-1:exon

position:9322607:-1
position: 9322607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9322838:-1
position: 9322838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9267433-9267501:-1:exon

position:9267433:-1
position: 9267433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9267501:-1
position: 9267501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9260062-9260175:-1:exon

position:9260062:-1
position: 9260062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9260175:-1
position: 9260175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9254047-9254180:-1:exon

position:9254047:-1
position: 9254047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9254180:-1
position: 9254180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9253646-9253846:-1:exon

position:9253646:-1
position: 9253646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9253846:-1
position: 9253846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9252992-9253109:-1:exon

position:9252992:-1
position: 9252992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9253109:-1
position: 9253109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9246763-9252162:-1:exon

position:9246763:-1
position: 9246763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9252162:-1
position: 9252162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9234700-9238896:-1:exon

position:9238896:-1
position: 9238896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005361856.3
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397288,9398214..9400846,9422624..9423062))
location: region:9234700-9423062:-1
so has part: feature:9422624-9423062:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397288:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

position:9423062:-1
position: 9423062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9422624-9423062:-1:exon

position:9422624:-1
position: 9422624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9398214-9400846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9396864-9397288:-1:exon

position:9397288:-1
position: 9397288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9234700-9238896:-1:exon

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005361855.2
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400846,9422624..9423062))
location: region:9234700-9423062:-1
so has part: feature:9422624-9423062:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9422624-9423062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9398214-9400846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9234700-9238896:-1:exon

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026786721.1
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400846,9422059..9422580))
location: region:9234700-9422580:-1
so has part: feature:9422059-9422580:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

position:9422580:-1
position: 9422580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9422059-9422580:-1:exon

position:9422059:-1
position: 9422059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9398214-9400846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9234700-9238896:-1:exon

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026786722.1
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400846,9421854..9422024))
location: region:9234700-9422024:-1
so has part: feature:9421854-9422024:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

position:9422024:-1
position: 9422024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421854-9422024:-1:exon

position:9421854:-1
position: 9421854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9398214-9400846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9234700-9238896:-1:exon

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026786719.1
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400846,9420322..9420478,9421854..9422024))
location: region:9234700-9422024:-1
so has part: feature:9421854-9422024:-1:exon
so has part: feature:9420322-9420478:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9421854-9422024:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9420322-9420478:-1:exon

position:9420322:-1
position: 9420322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9420478:-1
position: 9420478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9398214-9400846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9234700-9238896:-1:exon

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026786720.1
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400846,9421240..9421831))
location: region:9234700-9421831:-1
so has part: feature:9421240-9421831:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

position:9421831:-1
position: 9421831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421240-9421831:-1:exon

position:9421240:-1
position: 9421240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9398214-9400846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9234700-9238896:-1:exon

Zfhx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Zfhx4
product: zinc finger homeobox 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026786718.1
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9234700..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400846,9420322..9420478,9421240..9421831))
location: region:9234700-9421831:-1
so has part: feature:9421240-9421831:-1:exon
so has part: feature:9420322-9420478:-1:exon
so has part: feature:9398214-9400846:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9234700-9238896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9421240-9421831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9420322-9420478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9398214-9400846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9234700-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X2
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETPPPPPPPPPPMPPAPPQPSTLVPVKIP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397288,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397288:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_005361913.1
type: Protein
SIO_000068: ncbiprotein

position:9237425:-1
position: 9237425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9400800:-1
position: 9400800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X1
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_026642519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X1
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_026642520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X1
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_026642521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X1
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_026642522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X1
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_026642523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X1
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_005361912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

Zfhx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Zfhx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 4 isoform X1
translation: MATCDSPPISRQENGQSTSKLCGTTQLDNEVPEKVAGMEPDRENSSTDDNLKTDERKSEVLLGFSVENAAATPVTSAKEIPCNECATSFPSLQKYMEHHCPNARLPVLKDEESETSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAQTGANSKLFSTAMFLDSLAPAGEKSDQSASAPVSFYPQIINTFHIASSLGKPFTADQAFPNTSALAGVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSKFDGCVSDGKRKPVLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQRLLGNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENGDSLPAGFAFLKGSRSPSSSAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSHSSSESSKMSESKDQENNCERPKESTILHPNGECPVKSEPAEPGDEDEEDAYSNELDDEEVLGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSGTIADDTEKKKQTAAGRNSGSVTNSYNIGSKDFADVSASRDGATAAHSSETARGDDDSSATPHQHGFTPSTPGTPGPGGDGSPGSGIECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADPQLMINPFQLDSATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVNSERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDHYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGAVNSESCYYFCALCDYSSKIKLNLVQHVRSVKHQQTEGLRKLQLHQQGLPSEEDNLSEIFFVKDCPANELETASLGARTVEEELTEQQLRATSEDHSEEAGGVLKPTKVTEDDETETQRDNSEGKNSNKDPGVITPEKELKVNVSGGTQPLLLAKEEDAGTKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAAPEKSERDPPAIMSAEGSGKYSGESPVDDKSIAGLEESKASVEIKSEEQKPAKESLEASEWNKNSSKDVKISDPLHDQLSEQPKRQPLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPMNGELWAESEMMPQDDHGLDQEMEREYEVDHEGKASPVGSDSSSIPDDLGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSICSVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHLTGGHSITANVNSPGQGMLDSMSLASVNSKDTHLDAKELNKKQTPELISAPPTHHPPPRSPAQIQMQLQHELQQQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGAEFSLGPDLGLPSSATFGMPGMTGMAGSLLEDLKQQIQTHHVGQTQLQLLQQQAQQYQPAQPQLPPQNQQPPPPQQLPPQQQTSKLLKQEQGSLASTDCQLMKDMPAYKEVEEVTEKQEKPKPEFTSDSDGLKDSKDAKKQKSLEPCIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKGKIGEGENSDKLECGTCGKLFSNVLILKSHQEHVHGQFFPYGALEKFARQYREAYDKLYPISPSSPETP…
SIO_010081: Zfhx4
subclass of: SO_0000673
so part of: Zfhx4
location: complement(join(9237425..9238896,9246763..9252162,9252992..9253109,9253646..9253846,9254047..9254180,9260062..9260175,9267433..9267501,9322607..9322838,9396864..9397366,9398214..9400800))
location: region:9237425-9400800:-1
so has part: feature:9398214-9400800:-1:exon
so has part: feature:9396864-9397366:-1:exon
so has part: feature:9322607-9322838:-1:exon
so has part: feature:9267433-9267501:-1:exon
so has part: feature:9260062-9260175:-1:exon
so has part: feature:9254047-9254180:-1:exon
so has part: feature:9253646-9253846:-1:exon
so has part: feature:9252992-9253109:-1:exon
so has part: feature:9246763-9252162:-1:exon
so has part: feature:9237425-9238896:-1:exon

XP_013207221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9398214-9400800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9396864-9397366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9322607-9322838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9267433-9267501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9260062-9260175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9254047-9254180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9253646-9253846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9252992-9253109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9246763-9252162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9237425-9238896:-1:exon

LOC113457744
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9421004..9490482
location: region:9421004-9490482:1
so has part: feature:9421004-9490482:1:exon
subclass of: SO_0000011

113457744
type: Gene
SIO_000068: ncbigene

position:9421004:1
position: 9421004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9490482:1
position: 9490482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421004-9490482:1:exon

LOC113457744
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457744
product: uncharacterized LOC113457744, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003378246.1
SIO_010081: LOC113457744
subclass of: SO_0000673
so part of: LOC113457744
location: join(9421004..9421219,9447279..9447401,9466612..9466676,9484351..9485138,9490176..9490482)
location: region:9421004-9490482:1
so has part: feature:9421004-9421219:1:exon
so has part: feature:9447279-9447401:1:exon
so has part: feature:9466612-9466676:1:exon
so has part: feature:9484351-9485138:1:exon
so has part: feature:9490176-9490482:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9421004-9421219:1:exon

position:9421219:1
position: 9421219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9447279-9447401:1:exon

position:9447279:1
position: 9447279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9447401:1
position: 9447401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9466612-9466676:1:exon

position:9466612:1
position: 9466612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9466676:1
position: 9466676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9484351-9485138:1:exon

position:9484351:1
position: 9484351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9485138:1
position: 9485138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9490176-9490482:1:exon

position:9490176:1
position: 9490176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113457744
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457744
product: uncharacterized LOC113457744, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003378245.1
SIO_010081: LOC113457744
subclass of: SO_0000673
so part of: LOC113457744
location: join(9421004..9421219,9447279..9447401,9466612..9466676,9484351..9486306)
location: region:9421004-9486306:1
so has part: feature:9421004-9421219:1:exon
so has part: feature:9447279-9447401:1:exon
so has part: feature:9466612-9466676:1:exon
so has part: feature:9484351-9486306:1:exon

position:9486306:1
position: 9486306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421004-9421219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9447279-9447401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9466612-9466676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9484351-9486306:1:exon

LOC113457744
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457744
product: uncharacterized LOC113457744, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_003378247.1
SIO_010081: LOC113457744
subclass of: SO_0000673
so part of: LOC113457744
location: join(9421004..9421219,9466612..9466676,9484351..9486306)
location: region:9421004-9486306:1
so has part: feature:9421004-9421219:1:exon
so has part: feature:9466612-9466676:1:exon
so has part: feature:9484351-9486306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9421004-9421219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9466612-9466676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9484351-9486306:1:exon

Trnak-cuu
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Trnak-cuu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 10197545..10197617
location: region:10197545-10197617:1
so has part: feature:10197545-10197617:1:exon
subclass of: SO_0000663

113457802
type: Gene
SIO_000068: ncbigene

position:10197545:1
position: 10197545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10197617:1
position: 10197617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10197545-10197617:1:exon

Trnak-cuu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 79684
gene: Trnak-cuu
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:10197578..10197580,aa:Lys,seq:ctt)
SIO_010081: Trnak-cuu
subclass of: SO_0000673
so part of: Trnak-cuu
location: 10197545..10197617
location: region:10197545-10197617:1
so has part: feature:10197545-10197617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10197545-10197617:1:exon

LOC101994127
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101994127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10437266..10446687)
location: region:10437266-10446687:-1
so has part: feature:10437266-10446687:-1:exon

101994127
type: Gene
SIO_000068: ncbigene

position:10437266:-1
position: 10437266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10446687:-1
position: 10446687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10437266-10446687:-1:exon

LOC101994127
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101994127
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC101994127
subclass of: SO_0000673
so part of: LOC101994127
location: complement(10437266..10438278)
location: region:10437266-10438278:-1
so has part: feature:10437266-10438278:-1:exon

position:10438278:-1
position: 10438278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10437266-10438278:-1:exon

LOC101994127
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101994127
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC101994127
subclass of: SO_0000673
so part of: LOC101994127
location: complement(10446552..10446687)
location: region:10446552-10446687:-1
so has part: feature:10446552-10446687:-1:exon

position:10446552:-1
position: 10446552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10446552-10446687:-1:exon

Hnf4g
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hnf4g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10568784..10594335)
location: region:10568784-10594335:-1
so has part: feature:10568784-10594335:-1:exon
subclass of: SO_0000010

101992709
type: Gene
SIO_000068: ncbigene

position:10568784:-1
position: 10568784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10594335:-1
position: 10594335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10568784-10594335:-1:exon

Hnf4g
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hnf4g
product: hepatocyte nuclear factor 4 gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005361857.2
SIO_010081: Hnf4g
subclass of: SO_0000673
so part of: Hnf4g
location: complement(join(10568784..10569006,10573180..10573302,10574262..10574498,10574617..10574769,10578871..10578958,10581970..10582125,10583621..10583727,10586474..10586568,10590146..10590317,10594221..10594335))
location: region:10568784-10594335:-1
so has part: feature:10594221-10594335:-1:exon
so has part: feature:10590146-10590317:-1:exon
so has part: feature:10586474-10586568:-1:exon
so has part: feature:10583621-10583727:-1:exon
so has part: feature:10581970-10582125:-1:exon
so has part: feature:10578871-10578958:-1:exon
so has part: feature:10574617-10574769:-1:exon
so has part: feature:10574262-10574498:-1:exon
so has part: feature:10573180-10573302:-1:exon
so has part: feature:10568784-10569006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10594221-10594335:-1:exon

position:10594221:-1
position: 10594221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10590146-10590317:-1:exon

position:10590146:-1
position: 10590146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10590317:-1
position: 10590317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10586474-10586568:-1:exon

position:10586474:-1
position: 10586474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10586568:-1
position: 10586568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10583621-10583727:-1:exon

position:10583621:-1
position: 10583621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10583727:-1
position: 10583727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10581970-10582125:-1:exon

position:10581970:-1
position: 10581970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10582125:-1
position: 10582125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10578871-10578958:-1:exon

position:10578871:-1
position: 10578871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10578958:-1
position: 10578958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10574617-10574769:-1:exon

position:10574617:-1
position: 10574617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10574769:-1
position: 10574769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10574262-10574498:-1:exon

position:10574262:-1
position: 10574262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10574498:-1
position: 10574498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10573180-10573302:-1:exon

position:10573180:-1
position: 10573180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10573302:-1
position: 10573302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10568784-10569006:-1:exon

position:10569006:-1
position: 10569006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hnf4g
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hnf4g
product: hepatocyte nuclear factor 4 gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026786781.1
SIO_010081: Hnf4g
subclass of: SO_0000673
so part of: Hnf4g
location: complement(join(10568784..10569009,10570095..10570117,10573176..10573302,10574262..10574498,10574617..10574769,10578871..10578958,10581970..10582125,10583621..10583727,10586474..10586568,10590146..10590317,10594221..10594335))
location: region:10568784-10594335:-1
so has part: feature:10594221-10594335:-1:exon
so has part: feature:10590146-10590317:-1:exon
so has part: feature:10586474-10586568:-1:exon
so has part: feature:10583621-10583727:-1:exon
so has part: feature:10581970-10582125:-1:exon
so has part: feature:10578871-10578958:-1:exon
so has part: feature:10574617-10574769:-1:exon
so has part: feature:10574262-10574498:-1:exon
so has part: feature:10573176-10573302:-1:exon
so has part: feature:10570095-10570117:-1:exon
so has part: feature:10568784-10569009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10594221-10594335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10590146-10590317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10586474-10586568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10583621-10583727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10581970-10582125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10578871-10578958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10574617-10574769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10574262-10574498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10573176-10573302:-1:exon

position:10573176:-1
position: 10573176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10570095-10570117:-1:exon

position:10570095:-1
position: 10570095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10570117:-1
position: 10570117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10568784-10569009:-1:exon

position:10569009:-1
position: 10569009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hnf4g
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hnf4g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 4-gamma isoform X1
translation: MRVSEPMLDMDMGNYSEVLDPTYTALEFDTMQILYNSNDSSAPETTSMNTNDSGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISAPSPSASADINLKRIASISDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDVLLLGNNYVIHRNSCEVEVSRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGAANDGSHLHHPMHPHLSQDPLTGQTILLGPMSTLVHTDQISTPETPLPSPPQGSGQEQYKITANQASVISHQSLSKQKQL
SIO_010081: Hnf4g
subclass of: SO_0000673
so part of: Hnf4g
location: complement(join(10568885..10569006,10573180..10573302,10574262..10574498,10574617..10574769,10578871..10578958,10581970..10582125,10583621..10583727,10586474..10586568,10590146..10590317,10594221..10594335))
location: region:10568885-10594335:-1
so has part: feature:10594221-10594335:-1:exon
so has part: feature:10590146-10590317:-1:exon
so has part: feature:10586474-10586568:-1:exon
so has part: feature:10583621-10583727:-1:exon
so has part: feature:10581970-10582125:-1:exon
so has part: feature:10578871-10578958:-1:exon
so has part: feature:10574617-10574769:-1:exon
so has part: feature:10574262-10574498:-1:exon
so has part: feature:10573180-10573302:-1:exon
so has part: feature:10568885-10569006:-1:exon

XP_005361914.1
type: Protein
SIO_000068: ncbiprotein

position:10568885:-1
position: 10568885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10594221-10594335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10590146-10590317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10586474-10586568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10583621-10583727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10581970-10582125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10578871-10578958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10574617-10574769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10574262-10574498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10573180-10573302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10568885-10569006:-1:exon

Hnf4g
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hnf4g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 4-gamma isoform X2
translation: MRVSEPMLDMDMGNYSEVLDPTYTALEFDTMQILYNSNDSSAPETTSMNTNDSGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISAPSPSASADINLKRIASISDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDVLLLGNNYVIHRNSCEVEVSRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGAANDGSHLHHPMHPHLSQDPLTGQTILLGPMSTLVHTDQICKWLKGRGEAATPETPLPSPPQGSGQEQYKITANQASVISHQSLSKQKQL
SIO_010081: Hnf4g
subclass of: SO_0000673
so part of: Hnf4g
location: complement(join(10568885..10569009,10570095..10570117,10573176..10573302,10574262..10574498,10574617..10574769,10578871..10578958,10581970..10582125,10583621..10583727,10586474..10586568,10590146..10590317,10594221..10594335))
location: region:10568885-10594335:-1
so has part: feature:10594221-10594335:-1:exon
so has part: feature:10590146-10590317:-1:exon
so has part: feature:10586474-10586568:-1:exon
so has part: feature:10583621-10583727:-1:exon
so has part: feature:10581970-10582125:-1:exon
so has part: feature:10578871-10578958:-1:exon
so has part: feature:10574617-10574769:-1:exon
so has part: feature:10574262-10574498:-1:exon
so has part: feature:10573176-10573302:-1:exon
so has part: feature:10570095-10570117:-1:exon
so has part: feature:10568885-10569009:-1:exon

XP_026642582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10594221-10594335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10590146-10590317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10586474-10586568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10583621-10583727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10581970-10582125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10578871-10578958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10574617-10574769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10574262-10574498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10573176-10573302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10570095-10570117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10568885-10569009:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 79684
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 10838711..10838810
location: region:10838711-10838810:1
so has part: feature:10838711-10838810:1:region

position:10838711:1
position: 10838711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10838810:1
position: 10838810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10838711-10838810:1:region

Jph1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Jph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10876689..10959186
location: region:10876689-10959186:1
so has part: feature:10876689-10959186:1:exon
subclass of: SO_0000010

101994601
type: Gene
SIO_000068: ncbigene

position:10876689:1
position: 10876689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10959186:1
position: 10959186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10876689-10959186:1:exon

Jph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Jph1
product: junctophilin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005361860.3
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(10876689..10877230,10882691..10883450,10933876..10933994,10949207..10949844,10956665..10959186)
location: region:10876689-10959186:1
so has part: feature:10876689-10877230:1:exon
so has part: feature:10882691-10883450:1:exon
so has part: feature:10933876-10933994:1:exon
so has part: feature:10949207-10949844:1:exon
so has part: feature:10956665-10959186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10876689-10877230:1:exon

position:10877230:1
position: 10877230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10882691-10883450:1:exon

position:10882691:1
position: 10882691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10883450:1
position: 10883450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10933876-10933994:1:exon

position:10933876:1
position: 10933876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10933994:1
position: 10933994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10949207-10949844:1:exon

position:10949207:1
position: 10949207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10949844:1
position: 10949844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10956665-10959186:1:exon

position:10956665:1
position: 10956665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Jph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Jph1
product: junctophilin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013351813.2
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(10876689..10877230,10882691..10883450,10933876..10933994,10949207..10949844,10956665..10956760,10957181..10959186)
location: region:10876689-10959186:1
so has part: feature:10876689-10877230:1:exon
so has part: feature:10882691-10883450:1:exon
so has part: feature:10933876-10933994:1:exon
so has part: feature:10949207-10949844:1:exon
so has part: feature:10956665-10956760:1:exon
so has part: feature:10957181-10959186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10876689-10877230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10882691-10883450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10933876-10933994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10949207-10949844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10956665-10956760:1:exon

position:10956760:1
position: 10956760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10957181-10959186:1:exon

position:10957181:1
position: 10957181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Jph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Jph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-1
translation: MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSMSTPARYEGTWSNGLQDGYGVETYGDGGTYQGQWAGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSVLHDAAAAAADNPAGTRGGFVLNFHADTELGKKKGGLFRRGSLLGSMKLRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDCDFCPVEDHVDATTTETYMGEWKNDKRNGFGVSERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKYKNNILVRGIRKQLIPIRNTKTREKVDRAIEGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFYQPGPDYIKQRFQEGVDVKENPEEKVPEKPPSPKESPHFYRKGTTPPRSPEASPKQSHSPQPSSPKPMKKQNPSSGARLSQEKRSMTEEQVTAAVNKPLTSKAPSKELGATKFSGRHHVPNPSNGELHSQYHGYYVKLNTPQHPPEDGENDGGASQSSSALVHRPSANKWSPPKSVTKSVAKESKAEPKAKKSELAIPKNPASSDSCPSSEKEVNSGPNSIMIVLVMLLNIGLAILFVHFLT
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(10876852..10877230,10882691..10883450,10933876..10933994,10949207..10949844,10956665..10956745)
location: region:10876852-10956745:1
so has part: feature:10876852-10877230:1:exon
so has part: feature:10882691-10883450:1:exon
so has part: feature:10933876-10933994:1:exon
so has part: feature:10949207-10949844:1:exon
so has part: feature:10956665-10956745:1:exon

XP_005361917.1
type: Protein
SIO_000068: ncbiprotein

position:10876852:1
position: 10876852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10956745:1
position: 10956745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10876852-10877230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10882691-10883450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10933876-10933994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10949207-10949844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10956665-10956745:1:exon

Jph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Jph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-1
translation: MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSMSTPARYEGTWSNGLQDGYGVETYGDGGTYQGQWAGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSVLHDAAAAAADNPAGTRGGFVLNFHADTELGKKKGGLFRRGSLLGSMKLRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDCDFCPVEDHVDATTTETYMGEWKNDKRNGFGVSERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKYKNNILVRGIRKQLIPIRNTKTREKVDRAIEGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFYQPGPDYIKQRFQEGVDVKENPEEKVPEKPPSPKESPHFYRKGTTPPRSPEASPKQSHSPQPSSPKPMKKQNPSSGARLSQEKRSMTEEQVTAAVNKPLTSKAPSKELGATKFSGRHHVPNPSNGELHSQYHGYYVKLNTPQHPPEDGENDGGASQSSSALVHRPSANKWSPPKSVTKSVAKESKAEPKAKKSELAIPKNPASSDSCPSSEKEVNSGPNSIMIVLVMLLNIGLAILFVHFLT
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(10876852..10877230,10882691..10883450,10933876..10933994,10949207..10949844,10956665..10956745)
location: region:10876852-10956745:1
so has part: feature:10876852-10877230:1:exon
so has part: feature:10882691-10883450:1:exon
so has part: feature:10933876-10933994:1:exon
so has part: feature:10949207-10949844:1:exon
so has part: feature:10956665-10956745:1:exon

XP_013207267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10876852-10877230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10882691-10883450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10933876-10933994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10949207-10949844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10956665-10956745:1:exon

Ly96
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ly96
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11179489..11205076)
location: region:11179489-11205076:-1
so has part: feature:11179489-11205076:-1:exon
subclass of: SO_0000010

101994893
type: Gene
SIO_000068: ncbigene

position:11179489:-1
position: 11179489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11205076:-1
position: 11205076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11179489-11205076:-1:exon

Ly96
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ly96
product: lymphocyte antigen 96
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005361861.3
SIO_010081: Ly96
subclass of: SO_0000673
so part of: Ly96
location: complement(join(11179489..11179617,11181811..11181863,11194366..11194494,11200217..11200309,11204803..11205076))
location: region:11179489-11205076:-1
so has part: feature:11204803-11205076:-1:exon
so has part: feature:11200217-11200309:-1:exon
so has part: feature:11194366-11194494:-1:exon
so has part: feature:11181811-11181863:-1:exon
so has part: feature:11179489-11179617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11204803-11205076:-1:exon

position:11204803:-1
position: 11204803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11200217-11200309:-1:exon

position:11200217:-1
position: 11200217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11200309:-1
position: 11200309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11194366-11194494:-1:exon

position:11194366:-1
position: 11194366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11194494:-1
position: 11194494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11181811-11181863:-1:exon

position:11181811:-1
position: 11181811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11181863:-1
position: 11181863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11179489-11179617:-1:exon

position:11179617:-1
position: 11179617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ly96
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ly96
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte antigen 96
translation: MVFLACAKCWRYHIMLPFILFSTLLPPTFAKSEQQWFCNSSDTTISYTYCDNMKSYPILITSEPCITLKGTSGFVYVNFIPRRDLKKLYFNLSVHVNSVKIPVREEVICHGYDDDYSFCRALKGETVNTRVPFSFKGVILPKGRYKCIAEAIVGDDRERLFCLNFTIVHGTNVK
SIO_010081: Ly96
subclass of: SO_0000673
so part of: Ly96
location: complement(join(11179519..11179617,11181811..11181863,11194366..11194494,11200217..11200309,11204803..11204953))
location: region:11179519-11204953:-1
so has part: feature:11204803-11204953:-1:exon
so has part: feature:11200217-11200309:-1:exon
so has part: feature:11194366-11194494:-1:exon
so has part: feature:11181811-11181863:-1:exon
so has part: feature:11179519-11179617:-1:exon

XP_005361918.1
type: Protein
SIO_000068: ncbiprotein

position:11179519:-1
position: 11179519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11204953:-1
position: 11204953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11204803-11204953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11200217-11200309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11194366-11194494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11181811-11181863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11179519-11179617:-1:exon

Tmem70
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmem70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11229421..11240237)
location: region:11229421-11240237:-1
so has part: feature:11229421-11240237:-1:exon
subclass of: SO_0000010

101995576
type: Gene
SIO_000068: ncbigene

position:11229421:-1
position: 11229421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11240237:-1
position: 11240237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11229421-11240237:-1:exon

Tmem70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmem70
product: transmembrane protein 70
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_005361864.3
SIO_010081: Tmem70
subclass of: SO_0000673
so part of: Tmem70
location: complement(join(11229421..11230452,11237036..11237141,11239943..11240237))
location: region:11229421-11240237:-1
so has part: feature:11239943-11240237:-1:exon
so has part: feature:11237036-11237141:-1:exon
so has part: feature:11229421-11230452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11239943-11240237:-1:exon

position:11239943:-1
position: 11239943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11237036-11237141:-1:exon

position:11237036:-1
position: 11237036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11237141:-1
position: 11237141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11229421-11230452:-1:exon

position:11230452:-1
position: 11230452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmem70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 70, mitochondrial
translation: MLLLALGGRWAAGLRPGGWRTPWCAAAALRGSGVALWRAASRDEPARLLSGGLLRGVQPGPRAGGAQMPVFWERCVRCAHTQFDKPEDGRLIYTGNLARTVFGVKCFSYSTSVISLAFLPYLFSQSNVTFGSLPLQILFYGIMGTFTVITPMLLHFITKGYVIRLYHEAKSDTYKAITYNAVLSETSTVFHQNDVKIPESTHLFTTFYAKTKSLLVNPMLFPNPDDYNHLMGYDKPFTFDVEEVNEKKLHEDEK
SIO_010081: Tmem70
subclass of: SO_0000673
so part of: Tmem70
location: complement(join(11229995..11230452,11237036..11237141,11239943..11240143))
location: region:11229995-11240143:-1
so has part: feature:11239943-11240143:-1:exon
so has part: feature:11237036-11237141:-1:exon
so has part: feature:11229995-11230452:-1:exon

XP_005361921.1
type: Protein
SIO_000068: ncbiprotein

position:11229995:-1
position: 11229995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11240143:-1
position: 11240143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11239943-11240143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11237036-11237141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11229995-11230452:-1:exon

Eloc
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Eloc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11247132..11261787
location: region:11247132-11261787:1
so has part: feature:11247132-11261787:1:exon
subclass of: SO_0000010

101995868
type: Gene
SIO_000068: ncbigene

position:11247132:1
position: 11247132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11261787:1
position: 11261787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11247132-11261787:1:exon

Eloc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eloc
product: elongin C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_005361866.3
SIO_010081: Eloc
subclass of: SO_0000673
so part of: Eloc
location: join(11247132..11247299,11254746..11254798,11257943..11258086,11261085..11261484)
location: region:11247132-11261484:1
so has part: feature:11247132-11247299:1:exon
so has part: feature:11254746-11254798:1:exon
so has part: feature:11257943-11258086:1:exon
so has part: feature:11261085-11261484:1:exon

position:11261484:1
position: 11261484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11247132-11247299:1:exon

position:11247299:1
position: 11247299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11254746-11254798:1:exon

position:11254746:1
position: 11254746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11254798:1
position: 11254798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11257943-11258086:1:exon

position:11257943:1
position: 11257943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11258086:1
position: 11258086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11261085-11261484:1:exon

position:11261085:1
position: 11261085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Eloc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eloc
product: elongin C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_005361865.3
SIO_010081: Eloc
subclass of: SO_0000673
so part of: Eloc
location: join(11247375..11247467,11254746..11254798,11257943..11258086,11261085..11261787)
location: region:11247375-11261787:1
so has part: feature:11247375-11247467:1:exon
so has part: feature:11254746-11254798:1:exon
so has part: feature:11257943-11258086:1:exon
so has part: feature:11261085-11261787:1:exon

position:11247375:1
position: 11247375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11247375-11247467:1:exon

position:11247467:1
position: 11247467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11254746-11254798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11257943-11258086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11261085-11261787:1:exon

Eloc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eloc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin-C
translation: MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
SIO_010081: Eloc
subclass of: SO_0000673
so part of: Eloc
location: join(11254795..11254798,11257943..11258086,11261085..11261275)
location: region:11254795-11261275:1
so has part: feature:11254795-11254798:1:exon
so has part: feature:11257943-11258086:1:exon
so has part: feature:11261085-11261275:1:exon

XP_005361922.1
type: Protein
SIO_000068: ncbiprotein

position:11254795:1
position: 11254795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11261275:1
position: 11261275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11254795-11254798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11257943-11258086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11261085-11261275:1:exon

Eloc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eloc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin-C
translation: MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
SIO_010081: Eloc
subclass of: SO_0000673
so part of: Eloc
location: join(11254795..11254798,11257943..11258086,11261085..11261275)
location: region:11254795-11261275:1
so has part: feature:11254795-11254798:1:exon
so has part: feature:11257943-11258086:1:exon
so has part: feature:11261085-11261275:1:exon

XP_005361923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11254795-11254798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11257943-11258086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11261085-11261275:1:exon

Ube2w
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ube2w
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11282941..11340269
location: region:11282941-11340269:1
so has part: feature:11282941-11340269:1:exon
subclass of: SO_0000010

101996538
type: Gene
SIO_000068: ncbigene

position:11282941:1
position: 11282941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11340269:1
position: 11340269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11282941-11340269:1:exon

Ube2w
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ube2w
product: ubiquitin conjugating enzyme E2 W, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005361868.2
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(11282941..11282989,11300989..11301080,11304968..11305070,11315729..11315884,11319236..11319311,11338459..11340269)
location: region:11282941-11340269:1
so has part: feature:11282941-11282989:1:exon
so has part: feature:11300989-11301080:1:exon
so has part: feature:11304968-11305070:1:exon
so has part: feature:11315729-11315884:1:exon
so has part: feature:11319236-11319311:1:exon
so has part: feature:11338459-11340269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11282941-11282989:1:exon

position:11282989:1
position: 11282989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11300989-11301080:1:exon

position:11300989:1
position: 11300989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11301080:1
position: 11301080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11304968-11305070:1:exon

position:11304968:1
position: 11304968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11305070:1
position: 11305070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11315729-11315884:1:exon

position:11315729:1
position: 11315729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11315884:1
position: 11315884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11319236-11319311:1:exon

position:11319236:1
position: 11319236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11319311:1
position: 11319311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11338459-11340269:1:exon

position:11338459:1
position: 11338459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ube2w
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ube2w
product: ubiquitin conjugating enzyme E2 W, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_013351884.2
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(11282941..11282989,11300989..11301080,11304968..11305070,11315729..11315881,11319234..11319311,11338459..11340269)
location: region:11282941-11340269:1
so has part: feature:11282941-11282989:1:exon
so has part: feature:11300989-11301080:1:exon
so has part: feature:11304968-11305070:1:exon
so has part: feature:11315729-11315881:1:exon
so has part: feature:11319234-11319311:1:exon
so has part: feature:11338459-11340269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11282941-11282989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11300989-11301080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11304968-11305070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11315729-11315881:1:exon

position:11315881:1
position: 11315881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11319234-11319311:1:exon

position:11319234:1
position: 11319234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11338459-11340269:1:exon

Ube2w
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ube2w
product: ubiquitin conjugating enzyme E2 W, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013351886.2
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(11282949..11282989,11300989..11301080,11304968..11305070,11315808..11315884,11319236..11319311,11338459..11340269)
location: region:11282949-11340269:1
so has part: feature:11282949-11282989:1:exon
so has part: feature:11300989-11301080:1:exon
so has part: feature:11304968-11305070:1:exon
so has part: feature:11315808-11315884:1:exon
so has part: feature:11319236-11319311:1:exon
so has part: feature:11338459-11340269:1:exon

position:11282949:1
position: 11282949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11282949-11282989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11300989-11301080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11304968-11305070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11315808-11315884:1:exon

position:11315808:1
position: 11315808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11319236-11319311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11338459-11340269:1:exon

Ube2w
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ube2w
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 W isoform X1
translation: MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKERDDRQIIPFMCEHVTRIQRKQNGGIMMILVDATVIILVAEDSPTEKMSTLIIQSLNFNL
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(11282975..11282989,11300989..11301080,11304968..11305070,11315729..11315881,11319234..11319311,11338459..11338560)
location: region:11282975-11338560:1
so has part: feature:11282975-11282989:1:exon
so has part: feature:11300989-11301080:1:exon
so has part: feature:11304968-11305070:1:exon
so has part: feature:11315729-11315881:1:exon
so has part: feature:11319234-11319311:1:exon
so has part: feature:11338459-11338560:1:exon

XP_013207338.2
type: Protein
SIO_000068: ncbiprotein

position:11282975:1
position: 11282975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11338560:1
position: 11338560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11282975-11282989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11300989-11301080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11304968-11305070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11315729-11315881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11319234-11319311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11338459-11338560:1:exon

Ube2w
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ube2w
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 W isoform X3
translation: MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQKTGPQRSQSSQSVLALLACFPAAKKRDDRQIIPFMCEHVTRIQRKQNGGIMMILVDATVIILVAEDSPTEKMSTLIIQSLNFNL
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(11282975..11282989,11300989..11301080,11304968..11305070,11315808..11315884,11319236..11319311,11338459..11338560)
location: region:11282975-11338560:1
so has part: feature:11282975-11282989:1:exon
so has part: feature:11300989-11301080:1:exon
so has part: feature:11304968-11305070:1:exon
so has part: feature:11315808-11315884:1:exon
so has part: feature:11319236-11319311:1:exon
so has part: feature:11338459-11338560:1:exon

XP_013207340.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11282975-11282989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11300989-11301080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11304968-11305070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11315808-11315884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11319236-11319311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11338459-11338560:1:exon

Ube2w
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ube2w
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 W isoform X2
translation: MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(11282975..11282989,11300989..11301080,11304968..11305070,11315729..11315884,11319236..11319311,11338459..11338472)
location: region:11282975-11338472:1
so has part: feature:11282975-11282989:1:exon
so has part: feature:11300989-11301080:1:exon
so has part: feature:11304968-11305070:1:exon
so has part: feature:11315729-11315884:1:exon
so has part: feature:11319236-11319311:1:exon
so has part: feature:11338459-11338472:1:exon

XP_005361925.2
type: Protein
SIO_000068: ncbiprotein

position:11338472:1
position: 11338472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11282975-11282989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11300989-11301080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11304968-11305070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11315729-11315884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11319236-11319311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11338459-11338472:1:exon

Stau2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11397948..11698456
location: region:11397948-11698456:1
so has part: feature:11397948-11698456:1:exon
subclass of: SO_0000010

101983830
type: Gene
SIO_000068: ncbigene

position:11397948:1
position: 11397948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11698456:1
position: 11698456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11397948-11698456:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Stau2
product: staufen double-stranded RNA binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026786800.1
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(11397948..11398014,11425995..11426125,11450429..11450588,11461760..11461895,11502654..11502813,11504691..11504798,11514615..11514827,11526211..11526348,11534148..11534279,11557482..11557677,11574682..11574989,11696170..11696258,11697359..11698456)
location: region:11397948-11698456:1
so has part: feature:11397948-11398014:1:exon
so has part: feature:11425995-11426125:1:exon
so has part: feature:11450429-11450588:1:exon
so has part: feature:11461760-11461895:1:exon
so has part: feature:11502654-11502813:1:exon
so has part: feature:11504691-11504798:1:exon
so has part: feature:11514615-11514827:1:exon
so has part: feature:11526211-11526348:1:exon
so has part: feature:11534148-11534279:1:exon
so has part: feature:11557482-11557677:1:exon
so has part: feature:11574682-11574989:1:exon
so has part: feature:11696170-11696258:1:exon
so has part: feature:11697359-11698456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11397948-11398014:1:exon

position:11398014:1
position: 11398014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11425995-11426125:1:exon

position:11425995:1
position: 11425995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11426125:1
position: 11426125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11450429-11450588:1:exon

position:11450429:1
position: 11450429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11450588:1
position: 11450588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11461760-11461895:1:exon

position:11461760:1
position: 11461760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11461895:1
position: 11461895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11502654-11502813:1:exon

position:11502654:1
position: 11502654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11502813:1
position: 11502813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11504691-11504798:1:exon

position:11504691:1
position: 11504691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11504798:1
position: 11504798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11514615-11514827:1:exon

position:11514615:1
position: 11514615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11514827:1
position: 11514827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11526211-11526348:1:exon

position:11526211:1
position: 11526211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11526348:1
position: 11526348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11534148-11534279:1:exon

position:11534148:1
position: 11534148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11534279:1
position: 11534279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11557482-11557677:1:exon

position:11557482:1
position: 11557482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11557677:1
position: 11557677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11574682-11574989:1:exon

position:11574682:1
position: 11574682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11574989:1
position: 11574989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11696170-11696258:1:exon

position:11696170:1
position: 11696170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11696258:1
position: 11696258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11697359-11698456:1:exon

position:11697359:1
position: 11697359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2
translation: MANPKEKTPMCLVNELARFHSIQPQYKLLSESGPAHSKMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKPFPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPEKSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNPISRLAQIQQARKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDQLDKLNRHLKYTYSYQYPINTQGIQRIRMHRTFSLRKKPQNAQLNCVRGNYLLLSCTRDPDYASSRSTLTPKGILHLSPDVYQEMEASRHRVTSGTTLGYLSPKDMNQPSSSFFSMSPSSASSATVARELLMSGTSPTAEAIGLKGSSPTPPCSPVQPSKQLEYLARIQGFQAALSALKQFSEQGLESIDGAVNAEKGSLEKQAKHLREKADNNQANPGSITQDCKKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(11426012..11426125,11450429..11450588,11461760..11461895,11502654..11502813,11504691..11504798,11514615..11514827,11526211..11526348,11534148..11534279,11557482..11557677,11574682..11574989,11696170..11696258,11697359..11697452)
location: region:11426012-11697452:1
so has part: feature:11426012-11426125:1:exon
so has part: feature:11450429-11450588:1:exon
so has part: feature:11461760-11461895:1:exon
so has part: feature:11502654-11502813:1:exon
so has part: feature:11504691-11504798:1:exon
so has part: feature:11514615-11514827:1:exon
so has part: feature:11526211-11526348:1:exon
so has part: feature:11534148-11534279:1:exon
so has part: feature:11557482-11557677:1:exon
so has part: feature:11574682-11574989:1:exon
so has part: feature:11696170-11696258:1:exon
so has part: feature:11697359-11697452:1:exon

XP_026642601.1
type: Protein
SIO_000068: ncbiprotein

position:11426012:1
position: 11426012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11697452:1
position: 11697452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11426012-11426125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11450429-11450588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11461760-11461895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11502654-11502813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11504691-11504798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11514615-11514827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11526211-11526348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11534148-11534279:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11557482-11557677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11574682-11574989:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11696170-11696258:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11697359-11697452:1:exon

LOC113457786
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457786
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 11447012..11447175
location: region:11447012-11447175:1
so has part: feature:11447012-11447175:1:exon
subclass of: SO_0000623

113457786
type: Gene
SIO_000068: ncbigene

position:11447012:1
position: 11447012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11447175:1
position: 11447175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11447012-11447175:1:exon

LOC113457786
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457786
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378281.1
SIO_010081: LOC113457786
subclass of: SO_0000673
so part of: LOC113457786
location: 11447012..11447175
location: region:11447012-11447175:1
so has part: feature:11447012-11447175:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11447012-11447175:1:exon

Rdh10
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rdh10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11808579..11835939)
location: region:11808579-11835939:-1
so has part: feature:11808579-11835939:-1:exon
subclass of: SO_0000010

101996813
type: Gene
SIO_000068: ncbigene

position:11808579:-1
position: 11808579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11835939:-1
position: 11835939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11808579-11835939:-1:exon

Rdh10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rdh10
product: retinol dehydrogenase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005361869.3
SIO_010081: Rdh10
subclass of: SO_0000673
so part of: Rdh10
location: complement(join(11808579..11809896,11809978..11810109,11812700..11812845,11813772..11813870,11833339..11833574,11835000..11835939))
location: region:11808579-11835939:-1
so has part: feature:11835000-11835939:-1:exon
so has part: feature:11833339-11833574:-1:exon
so has part: feature:11813772-11813870:-1:exon
so has part: feature:11812700-11812845:-1:exon
so has part: feature:11809978-11810109:-1:exon
so has part: feature:11808579-11809896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11835000-11835939:-1:exon

position:11835000:-1
position: 11835000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11833339-11833574:-1:exon

position:11833339:-1
position: 11833339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11833574:-1
position: 11833574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11813772-11813870:-1:exon

position:11813772:-1
position: 11813772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11813870:-1
position: 11813870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11812700-11812845:-1:exon

position:11812700:-1
position: 11812700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11812845:-1
position: 11812845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11809978-11810109:-1:exon

position:11809978:-1
position: 11809978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11810109:-1
position: 11810109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11808579-11809896:-1:exon

position:11809896:-1
position: 11809896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rdh10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rdh10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 10
translation: MNIVVEFFVVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAQLVLWDINTQSNEETAGMVRHIYRDLEAADAAALQAGNGEEEILPPCNLQVFTYTCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGMFRGCRIRKEIEPFLPPLKPDYCVKQAMRAILTDQPMICTPRLMYMVTFMKSILPFEAVVCMYRFLGADKCMYPFIAQRKQATNNNEAKNGI
SIO_010081: Rdh10
subclass of: SO_0000673
so part of: Rdh10
location: complement(join(11809773..11809896,11809978..11810109,11812700..11812845,11813772..11813870,11833339..11833574,11835000..11835288))
location: region:11809773-11835288:-1
so has part: feature:11835000-11835288:-1:exon
so has part: feature:11833339-11833574:-1:exon
so has part: feature:11813772-11813870:-1:exon
so has part: feature:11812700-11812845:-1:exon
so has part: feature:11809978-11810109:-1:exon
so has part: feature:11809773-11809896:-1:exon

XP_005361926.1
type: Protein
SIO_000068: ncbiprotein

position:11809773:-1
position: 11809773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11835288:-1
position: 11835288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11835000-11835288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11833339-11833574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11813772-11813870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11812700-11812845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11809978-11810109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11809773-11809896:-1:exon

Rpl7
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rpl7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11836913..11840189
location: region:11836913-11840189:1
so has part: feature:11836913-11840189:1:exon
subclass of: SO_0000010

101997286
type: Gene
SIO_000068: ncbigene

position:11836913:1
position: 11836913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11840189:1
position: 11840189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11836913-11840189:1:exon

Rpl7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rpl7
product: ribosomal protein L7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_013351952.2
SIO_010081: Rpl7
subclass of: SO_0000673
so part of: Rpl7
location: join(11836913..11836962,11837655..11837832,11838038..11838204,11838592..11838729,11838829..11838938,11839582..11839791,11840126..11840189)
location: region:11836913-11840189:1
so has part: feature:11836913-11836962:1:exon
so has part: feature:11837655-11837832:1:exon
so has part: feature:11838038-11838204:1:exon
so has part: feature:11838592-11838729:1:exon
so has part: feature:11838829-11838938:1:exon
so has part: feature:11839582-11839791:1:exon
so has part: feature:11840126-11840189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11836913-11836962:1:exon

position:11836962:1
position: 11836962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11837655-11837832:1:exon

position:11837655:1
position: 11837655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11837832:1
position: 11837832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11838038-11838204:1:exon

position:11838038:1
position: 11838038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11838204:1
position: 11838204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11838592-11838729:1:exon

position:11838592:1
position: 11838592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11838729:1
position: 11838729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11838829-11838938:1:exon

position:11838829:1
position: 11838829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11838938:1
position: 11838938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11839582-11839791:1:exon

position:11839582:1
position: 11839582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11839791:1
position: 11839791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11840126-11840189:1:exon

position:11840126:1
position: 11840126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rpl7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rpl7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L7
translation: MEAVPEKKKVPAAPGTQKKKKVPAAPGTLKKKKLPAVPETLKKKRKNFAELKVKRLRKKIALKSLRRAQRKLIYEKAKYYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIHKKRIALTDNSLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN
SIO_010081: Rpl7
subclass of: SO_0000673
so part of: Rpl7
location: join(11836949..11836962,11837655..11837832,11838038..11838204,11838592..11838729,11838829..11838938,11839582..11839790)
location: region:11836949-11839790:1
so has part: feature:11836949-11836962:1:exon
so has part: feature:11837655-11837832:1:exon
so has part: feature:11838038-11838204:1:exon
so has part: feature:11838592-11838729:1:exon
so has part: feature:11838829-11838938:1:exon
so has part: feature:11839582-11839790:1:exon

XP_013207406.1
type: Protein
SIO_000068: ncbiprotein

position:11836949:1
position: 11836949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11839790:1
position: 11839790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11836949-11836962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11837655-11837832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11838038-11838204:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11838592-11838729:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11838829-11838938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11839582-11839790:1:exon

LG5H8orf89
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LG5H8orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11848001..11869740
location: region:11848001-11869740:1
so has part: feature:11848001-11869740:1:exon
subclass of: SO_0000010

106144207
type: Gene
SIO_000068: ncbigene

position:11848001:1
position: 11848001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11869740:1
position: 11869740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11848001-11869740:1:exon

LG5H8orf89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG5H8orf89
product: linkage group 5 C8orf89 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026786558.1
SIO_010081: LG5H8orf89
subclass of: SO_0000673
so part of: LG5H8orf89
location: join(11848001..11848284,11859846..11860012,11861926..11862067,11867887..11867942,11869417..11869740)
location: region:11848001-11869740:1
so has part: feature:11848001-11848284:1:exon
so has part: feature:11859846-11860012:1:exon
so has part: feature:11861926-11862067:1:exon
so has part: feature:11867887-11867942:1:exon
so has part: feature:11869417-11869740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11848001-11848284:1:exon

position:11848284:1
position: 11848284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11859846-11860012:1:exon

position:11859846:1
position: 11859846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11860012:1
position: 11860012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11861926-11862067:1:exon

position:11861926:1
position: 11861926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11862067:1
position: 11862067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11867887-11867942:1:exon

position:11867887:1
position: 11867887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11867942:1
position: 11867942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11869417-11869740:1:exon

position:11869417:1
position: 11869417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LG5H8orf89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG5H8orf89
product: linkage group 5 C8orf89 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_013351831.2
SIO_010081: LG5H8orf89
subclass of: SO_0000673
so part of: LG5H8orf89
location: join(11848003..11848284,11859849..11860012,11861926..11862067,11867887..11867942,11869417..11869740)
location: region:11848003-11869740:1
so has part: feature:11848003-11848284:1:exon
so has part: feature:11859849-11860012:1:exon
so has part: feature:11861926-11862067:1:exon
so has part: feature:11867887-11867942:1:exon
so has part: feature:11869417-11869740:1:exon

position:11848003:1
position: 11848003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11848003-11848284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11859849-11860012:1:exon

position:11859849:1
position: 11859849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11861926-11862067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11867887-11867942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11869417-11869740:1:exon

LG5H8orf89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG5H8orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C8orf89 homolog
translation: MTMFSPEFKFEASKVSRSSLDKCFLFESSWRKAVLETQKMRKAFGLEEPKECLKMPYLPELPSCPKSLNSTPLEIHKHLLHAETEIPPIRIKKTKESCSMTALQEKSKGSVFSDPFSGAPSQFLQRMSRMAILEYDTIRQETHKKSRRGKKRDLRDC
SIO_010081: LG5H8orf89
subclass of: SO_0000673
so part of: LG5H8orf89
location: join(11859886..11860012,11861926..11862067,11867887..11867942,11869417..11869565)
location: region:11859886-11869565:1
so has part: feature:11859886-11860012:1:exon
so has part: feature:11861926-11862067:1:exon
so has part: feature:11867887-11867942:1:exon
so has part: feature:11869417-11869565:1:exon

XP_026642359.1
type: Protein
SIO_000068: ncbiprotein

position:11859886:1
position: 11859886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11869565:1
position: 11869565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11859886-11860012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11861926-11862067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11867887-11867942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11869417-11869565:1:exon

LG5H8orf89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG5H8orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C8orf89 homolog
translation: MTMFSPEFKFEASKVSRSSLDKCFLFESSWRKAVLETQKMRKAFGLEEPKECLKMPYLPELPSCPKSLNSTPLEIHKHLLHAETEIPPIRIKKTKESCSMTALQEKSKGSVFSDPFSGAPSQFLQRMSRMAILEYDTIRQETHKKSRRGKKRDLRDC
SIO_010081: LG5H8orf89
subclass of: SO_0000673
so part of: LG5H8orf89
location: join(11859886..11860012,11861926..11862067,11867887..11867942,11869417..11869565)
location: region:11859886-11869565:1
so has part: feature:11859886-11860012:1:exon
so has part: feature:11861926-11862067:1:exon
so has part: feature:11867887-11867942:1:exon
so has part: feature:11869417-11869565:1:exon

XP_013207285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11859886-11860012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11861926-11862067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11867887-11867942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11869417-11869565:1:exon

Sbspon
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sbspon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12002281..12034864
location: region:12002281-12034864:1
so has part: feature:12002281-12034864:1:exon
subclass of: SO_0000010

101998063
type: Gene
SIO_000068: ncbigene

position:12002281:1
position: 12002281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12034864:1
position: 12034864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12002281-12034864:1:exon

Sbspon
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sbspon
product: somatomedin B and thrombospondin type 1 domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005361870.2
SIO_010081: Sbspon
subclass of: SO_0000673
so part of: Sbspon
location: join(12002281..12002543,12017271..12017465,12028353..12028443,12030149..12030325,12034374..12034864)
location: region:12002281-12034864:1
so has part: feature:12002281-12002543:1:exon
so has part: feature:12017271-12017465:1:exon
so has part: feature:12028353-12028443:1:exon
so has part: feature:12030149-12030325:1:exon
so has part: feature:12034374-12034864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12002281-12002543:1:exon

position:12002543:1
position: 12002543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12017271-12017465:1:exon

position:12017271:1
position: 12017271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12017465:1
position: 12017465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12028353-12028443:1:exon

position:12028353:1
position: 12028353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12028443:1
position: 12028443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12030149-12030325:1:exon

position:12030149:1
position: 12030149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12030325:1
position: 12030325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12034374-12034864:1:exon

position:12034374:1
position: 12034374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sbspon
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sbspon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatomedin-B and thrombospondin type-1 domain-containing protein
translation: MRTLWMVLCALARLWPGALAGCAEAGRCCPGRDPACFARGWRLDRVYGTCFCDQACRLTGDCCFDYDRACPARPCFVGEWSPWSGCAGQCKPTTRVRRRSVQQEPLNGGAPCPPLEERAGCLEYTSSQGRDCGHSFVPAFITSSAFNKKRTIQAASPQWSTQTEDAGYCMEFKTESLTPHCALDNRPLTRWTQYLREGYTVCVDCQPPAMNSVSLRCSGDGQDSDGNQTLRWQAIGNPRCQGTWKKVRRVDQCSCPEVHRFIFI
SIO_010081: Sbspon
subclass of: SO_0000673
so part of: Sbspon
location: join(12002330..12002543,12017271..12017465,12028353..12028443,12030149..12030325,12034374..12034491)
location: region:12002330-12034491:1
so has part: feature:12002330-12002543:1:exon
so has part: feature:12017271-12017465:1:exon
so has part: feature:12028353-12028443:1:exon
so has part: feature:12030149-12030325:1:exon
so has part: feature:12034374-12034491:1:exon

XP_005361927.1
type: Protein
SIO_000068: ncbiprotein

position:12002330:1
position: 12002330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12034491:1
position: 12034491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12002330-12002543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12017271-12017465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12028353-12028443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12030149-12030325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12034374-12034491:1:exon

Terf1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Terf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12040210..12077689)
location: region:12040210-12077689:-1
so has part: feature:12040210-12077689:-1:exon
subclass of: SO_0000010

101998345
type: Gene
SIO_000068: ncbigene

position:12040210:-1
position: 12040210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12077689:-1
position: 12077689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12040210-12077689:-1:exon

Terf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Terf1
product: telomeric repeat binding factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026786762.1
SIO_010081: Terf1
subclass of: SO_0000673
so part of: Terf1
location: complement(join(12040210..12040682,12051559..12051665,12053790..12053878,12056163..12056222,12063092..12063204,12063752..12063901,12068982..12069103,12073746..12073841,12077408..12077689))
location: region:12040210-12077689:-1
so has part: feature:12077408-12077689:-1:exon
so has part: feature:12073746-12073841:-1:exon
so has part: feature:12068982-12069103:-1:exon
so has part: feature:12063752-12063901:-1:exon
so has part: feature:12063092-12063204:-1:exon
so has part: feature:12056163-12056222:-1:exon
so has part: feature:12053790-12053878:-1:exon
so has part: feature:12051559-12051665:-1:exon
so has part: feature:12040210-12040682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12077408-12077689:-1:exon

position:12077408:-1
position: 12077408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12073746-12073841:-1:exon

position:12073746:-1
position: 12073746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12073841:-1
position: 12073841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12068982-12069103:-1:exon

position:12068982:-1
position: 12068982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12069103:-1
position: 12069103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12063752-12063901:-1:exon

position:12063752:-1
position: 12063752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12063901:-1
position: 12063901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12063092-12063204:-1:exon

position:12063092:-1
position: 12063092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12063204:-1
position: 12063204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12056163-12056222:-1:exon

position:12056163:-1
position: 12056163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12056222:-1
position: 12056222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12053790-12053878:-1:exon

position:12053790:-1
position: 12053790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12053878:-1
position: 12053878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12051559-12051665:-1:exon

position:12051559:-1
position: 12051559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12051665:-1
position: 12051665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12040210-12040682:-1:exon

position:12040682:-1
position: 12040682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Terf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Terf1
product: telomeric repeat binding factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005361871.3
SIO_010081: Terf1
subclass of: SO_0000673
so part of: Terf1
location: complement(join(12040210..12040682,12051559..12051665,12053790..12053878,12056163..12056222,12063092..12063204,12063752..12063901,12066970..12067056,12068982..12069103,12073746..12073841,12077408..12077689))
location: region:12040210-12077689:-1
so has part: feature:12077408-12077689:-1:exon
so has part: feature:12073746-12073841:-1:exon
so has part: feature:12068982-12069103:-1:exon
so has part: feature:12066970-12067056:-1:exon
so has part: feature:12063752-12063901:-1:exon
so has part: feature:12063092-12063204:-1:exon
so has part: feature:12056163-12056222:-1:exon
so has part: feature:12053790-12053878:-1:exon
so has part: feature:12051559-12051665:-1:exon
so has part: feature:12040210-12040682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12077408-12077689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12073746-12073841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12068982-12069103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12066970-12067056:-1:exon

position:12066970:-1
position: 12066970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12067056:-1
position: 12067056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12063752-12063901:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12063092-12063204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12056163-12056222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12053790-12053878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12051559-12051665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12040210-12040682:-1:exon

Terf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Terf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 1 isoform X2
translation: MAAAVASGAPSALGCAGREDVDCPEKEVTGGDAELPERQLQVPEKENAELVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRDSAEAIIHGLPSLTTYQLRTVYICQFLTRIAAGKSLDAQFESDERITPLESALMIWDSIEKEHDKLHEEIQNLIKIQSLERKLLRIISQKDAFHSFFQHFSYNCMMEKIKSYVDCVMNEKSSTFLMKAATKVVENEKARTLASENKPDATNTETETEVNLNKGESVGGQQCTETESLMNTVSVIRSHKTVLSKLKQQSSQPDFNKKEAKLGILQSEITTEGNRRTTGHNSLCISGDSPDTNEKHRRKKKQPWIWEEDRFLKCGVRKYGEGNWTKILSHYKFNNRTSVMLKDRWRTMKKLRLVN
SIO_010081: Terf1
subclass of: SO_0000673
so part of: Terf1
location: complement(join(12040521..12040682,12051559..12051665,12053790..12053878,12056163..12056222,12063092..12063204,12063752..12063901,12068982..12069103,12073746..12073841,12077408..12077678))
location: region:12040521-12077678:-1
so has part: feature:12077408-12077678:-1:exon
so has part: feature:12073746-12073841:-1:exon
so has part: feature:12068982-12069103:-1:exon
so has part: feature:12063752-12063901:-1:exon
so has part: feature:12063092-12063204:-1:exon
so has part: feature:12056163-12056222:-1:exon
so has part: feature:12053790-12053878:-1:exon
so has part: feature:12051559-12051665:-1:exon
so has part: feature:12040521-12040682:-1:exon

XP_026642563.1
type: Protein
SIO_000068: ncbiprotein

position:12040521:-1
position: 12040521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12077678:-1
position: 12077678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12077408-12077678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12073746-12073841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12068982-12069103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12063752-12063901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12063092-12063204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12056163-12056222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12053790-12053878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12051559-12051665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12040521-12040682:-1:exon

Terf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Terf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 1 isoform X1
translation: MAAAVASGAPSALGCAGREDVDCPEKEVTGGDAELPERQLQVPEKENAELVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRDSAEAIIHGLPSLTTYQLRTVYICQFLTRIAAGKSLDAQFESDERITPLESALMIWDSIEKEHDKLHEEIQNLIKIQAVAVCMESGNFKEAEEVFERIFGDPESHTSLERKLLRIISQKDAFHSFFQHFSYNCMMEKIKSYVDCVMNEKSSTFLMKAATKVVENEKARTLASENKPDATNTETETEVNLNKGESVGGQQCTETESLMNTVSVIRSHKTVLSKLKQQSSQPDFNKKEAKLGILQSEITTEGNRRTTGHNSLCISGDSPDTNEKHRRKKKQPWIWEEDRFLKCGVRKYGEGNWTKILSHYKFNNRTSVMLKDRWRTMKKLRLVN
SIO_010081: Terf1
subclass of: SO_0000673
so part of: Terf1
location: complement(join(12040521..12040682,12051559..12051665,12053790..12053878,12056163..12056222,12063092..12063204,12063752..12063901,12066970..12067056,12068982..12069103,12073746..12073841,12077408..12077678))
location: region:12040521-12077678:-1
so has part: feature:12077408-12077678:-1:exon
so has part: feature:12073746-12073841:-1:exon
so has part: feature:12068982-12069103:-1:exon
so has part: feature:12066970-12067056:-1:exon
so has part: feature:12063752-12063901:-1:exon
so has part: feature:12063092-12063204:-1:exon
so has part: feature:12056163-12056222:-1:exon
so has part: feature:12053790-12053878:-1:exon
so has part: feature:12051559-12051665:-1:exon
so has part: feature:12040521-12040682:-1:exon

XP_005361928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12077408-12077678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12073746-12073841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12068982-12069103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12066970-12067056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12063752-12063901:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12063092-12063204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12056163-12056222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12053790-12053878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12051559-12051665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12040521-12040682:-1:exon

LOC101984123
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12114016..12114210)
location: region:12114016-12114210:-1
so has part: feature:12114016-12114210:-1:exon
subclass of: SO_0000010

101984123
type: Gene
SIO_000068: ncbigene

position:12114016:-1
position: 12114016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12114210:-1
position: 12114210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12114016-12114210:-1:exon

LOC101984123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101984123
product: zinc finger protein 431-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026786827.1
SIO_010081: LOC101984123
subclass of: SO_0000673
so part of: LOC101984123
location: complement(12114016..12114210)
location: region:12114016-12114210:-1
so has part: feature:12114016-12114210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12114016-12114210:-1:exon

LOC101984123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101984123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 431-like
translation: MKAVTYDDVHVNFTEEEWNLLDPSQKNLYKDMMLETYRNLTTIGYIWEEHNSKEHCQRSRRHER
SIO_010081: LOC101984123
subclass of: SO_0000673
so part of: LOC101984123
location: complement(12114016..12114210)
location: region:12114016-12114210:-1
so has part: feature:12114016-12114210:-1:exon

XP_026642628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12114016-12114210:-1:exon

Kcnb2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Kcnb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12188576..12628563)
location: region:12188576-12628563:-1
so has part: feature:12188576-12628563:-1:exon
subclass of: SO_0000010

101998625
type: Gene
SIO_000068: ncbigene

position:12188576:-1
position: 12188576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12628563:-1
position: 12628563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12188576-12628563:-1:exon

Kcnb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Kcnb2
product: potassium voltage-gated channel subfamily B member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_013351787.2
SIO_010081: Kcnb2
subclass of: SO_0000673
so part of: Kcnb2
location: complement(join(12188576..12195833,12600054..12600721,12628490..12628563))
location: region:12188576-12628563:-1
so has part: feature:12628490-12628563:-1:exon
so has part: feature:12600054-12600721:-1:exon
so has part: feature:12188576-12195833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12628490-12628563:-1:exon

position:12628490:-1
position: 12628490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12600054-12600721:-1:exon

position:12600054:-1
position: 12600054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12600721:-1
position: 12600721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12188576-12195833:-1:exon

position:12195833:-1
position: 12195833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Kcnb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Kcnb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily B member 2
translation: MAEKAPPGLNRKTSRSTLSLPPEPVDIIRSKTCSRRVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLNENEYFFDRHPGAFTSILNFYRTGKLHMMEEMCALSFGQELDYWGIDEIYLESCCQARYHQKKEQMNEELRREAETMREREGEEFDNTCCPEKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLNTLPELQENDEFGQPSDNRKLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELIDVAVEKAGESANTKDSVDDNHLSPSRWKWARKALSETSSNKSYENKYQEVSQKDSHEQLNNTSSSSPQHLSAQKLEMLYNEITKTQPHCHPNPDCQEQPERPSAYEEEIEMEEVVCPQEQLAVAQTEVIVDMKSTSSIDSFTSCATDFTETERSPLPPPSASHLQMKFPTDLPGTEEHQRVRALPFLTLSRDKGHAAREATLDYAPIDITVNLDAGTSHGPLQSDSATDSPKSSLKGSNPLKSRSLKVNFQENRGSAPQTPPSTARPLPVTTADFPLTTPQHISTILLEESLAQGERPLLGADASAHCQGPSKGLSPRFPKQKLFTFSPRERRSFTEIDTGEDEDFLDLQRSRPDKQTDSSPNCLANEPGDARDPLREEGCVGSSSPLNTDHNCRQDNYQAVGEVKKDSSQEGYKMENHLFAPEIHSNPGDTGYCPTRETSM
SIO_010081: Kcnb2
subclass of: SO_0000673
so part of: Kcnb2
location: complement(join(12193689..12195833,12600054..12600632))
location: region:12193689-12600632:-1
so has part: feature:12600054-12600632:-1:exon
so has part: feature:12193689-12195833:-1:exon

XP_013207241.2
type: Protein
SIO_000068: ncbiprotein

position:12193689:-1
position: 12193689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12600632:-1
position: 12600632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12600054-12600632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12193689-12195833:-1:exon

Trpa1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Trpa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12869653..12914511
location: region:12869653-12914511:1
so has part: feature:12869653-12914511:1:exon
subclass of: SO_0000010

101984403
type: Gene
SIO_000068: ncbigene

position:12869653:1
position: 12869653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12914511:1
position: 12914511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12869653-12914511:1:exon

Trpa1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Trpa1
product: transient receptor potential cation channel subfamily A member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005362351.2
SIO_010081: Trpa1
subclass of: SO_0000673
so part of: Trpa1
location: join(12869653..12869763,12876201..12876360,12878040..12878215,12881914..12882021,12883467..12883575,12883738..12883883,12884751..12884887,12887312..12887360,12889047..12889146,12889710..12889810,12890943..12891112,12891196..12891360,12892643..12892757,12895894..12896060,12898265..12898358,12899247..12899306,12900258..12900356,12901456..12901526,12902051..12902213,12903111..12903200,12905051..12905220,12906971..12907100,12907606..12907788,12909196..12909264,12911873..12911983,12913554..12913651,12914313..12914511)
location: region:12869653-12914511:1
so has part: feature:12869653-12869763:1:exon
so has part: feature:12876201-12876360:1:exon
so has part: feature:12878040-12878215:1:exon
so has part: feature:12881914-12882021:1:exon
so has part: feature:12883467-12883575:1:exon
so has part: feature:12883738-12883883:1:exon
so has part: feature:12884751-12884887:1:exon
so has part: feature:12887312-12887360:1:exon
so has part: feature:12889047-12889146:1:exon
so has part: feature:12889710-12889810:1:exon
so has part: feature:12890943-12891112:1:exon
so has part: feature:12891196-12891360:1:exon
so has part: feature:12892643-12892757:1:exon
so has part: feature:12895894-12896060:1:exon
so has part: feature:12898265-12898358:1:exon
so has part: feature:12899247-12899306:1:exon
so has part: feature:12900258-12900356:1:exon
so has part: feature:12901456-12901526:1:exon
so has part: feature:12902051-12902213:1:exon
so has part: feature:12903111-12903200:1:exon
so has part: feature:12905051-12905220:1:exon
so has part: feature:12906971-12907100:1:exon
so has part: feature:12907606-12907788:1:exon
so has part: feature:12909196-12909264:1:exon
so has part: feature:12911873-12911983:1:exon
so has part: feature:12913554-12913651:1:exon
so has part: feature:12914313-12914511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12869653-12869763:1:exon

position:12869763:1
position: 12869763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12876201-12876360:1:exon

position:12876201:1
position: 12876201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12876360:1
position: 12876360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12878040-12878215:1:exon

position:12878040:1
position: 12878040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12878215:1
position: 12878215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12881914-12882021:1:exon

position:12881914:1
position: 12881914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12882021:1
position: 12882021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12883467-12883575:1:exon

position:12883467:1
position: 12883467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12883575:1
position: 12883575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12883738-12883883:1:exon

position:12883738:1
position: 12883738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12883883:1
position: 12883883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12884751-12884887:1:exon

position:12884751:1
position: 12884751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12884887:1
position: 12884887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12887312-12887360:1:exon

position:12887312:1
position: 12887312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12887360:1
position: 12887360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12889047-12889146:1:exon

position:12889047:1
position: 12889047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12889146:1
position: 12889146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12889710-12889810:1:exon

position:12889710:1
position: 12889710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12889810:1
position: 12889810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12890943-12891112:1:exon

position:12890943:1
position: 12890943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12891112:1
position: 12891112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12891196-12891360:1:exon

position:12891196:1
position: 12891196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12891360:1
position: 12891360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12892643-12892757:1:exon

position:12892643:1
position: 12892643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12892757:1
position: 12892757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12895894-12896060:1:exon

position:12895894:1
position: 12895894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12896060:1
position: 12896060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12898265-12898358:1:exon

position:12898265:1
position: 12898265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12898358:1
position: 12898358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12899247-12899306:1:exon

position:12899247:1
position: 12899247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12899306:1
position: 12899306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:12900258-12900356:1:exon

position:12900258:1
position: 12900258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12900356:1
position: 12900356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:12901456-12901526:1:exon

position:12901456:1
position: 12901456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12901526:1
position: 12901526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:12902051-12902213:1:exon

position:12902051:1
position: 12902051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12902213:1
position: 12902213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:12903111-12903200:1:exon

position:12903111:1
position: 12903111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12903200:1
position: 12903200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:12905051-12905220:1:exon

position:12905051:1
position: 12905051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12905220:1
position: 12905220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:12906971-12907100:1:exon

position:12906971:1
position: 12906971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12907100:1
position: 12907100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:12907606-12907788:1:exon

position:12907606:1
position: 12907606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12907788:1
position: 12907788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:12909196-12909264:1:exon

position:12909196:1
position: 12909196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12909264:1
position: 12909264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:12911873-12911983:1:exon

position:12911873:1
position: 12911873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12911983:1
position: 12911983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:12913554-12913651:1:exon

position:12913554:1
position: 12913554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12913651:1
position: 12913651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:12914313-12914511:1:exon

position:12914313:1
position: 12914313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trpa1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Trpa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily A member 1
translation: MKCSLRRMLRPEERKEIQGVAYCGVKEDRDCFKDSFKVDMEGDTYRLEDFIKNRRKLSKFEDENISPLHHAAAEGQIELMKMIIHGSSCEVLNIMDSCGNTPLHWAAEKNQVESVKFLLSQGANPNLRNSTLMAPLHIAVQSSYNEMIKVLTEHNTTNINLEGENGNTAVMSTCAKDNSEALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKKCMELILKYGEKHGCSRGTHINFVNHKKVSPLHLAVQSGDLDMIQMCLDNGAHVDMIENGKCMALHFAATQGATDIVKLMISSYTGSRDIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVNLLLSKGAKVDIKDHLGRNFLHLTVQQPYGLKNLRPEFMQMQHIKELVMDEDNDGCTPLHYACRQGVPVSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLNYNAEILLNKQHASFLHIALHNKRKEVVLTTIRSKRWDECFQVFSHYSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYNFKYLQCPLALTKKLTPTQDVRYEPLAILNVMVQHNRIELLNHPVCKEYLLMKWCAYGFRAHMMNLGSYCLGLIPMTFLVVKIKPGMAFNSTGIINETTNHLETVDTLNSFPIKICMILVFLSSLFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSIIFVLPLFLNIPAYMQWECGAIAIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLSFQDAFSTPLLSLIQTFSMMLGDINYRDAFLEPFLKKELAYPVLTFGQLIAFTMFVPIVLMNLLIGLAVGDIAEVQKHAALKRIAMQVELHTNLEKKLPLWFLRKVDQQYTVVYPNRPRHGRMLRFFHYFLCTQETRQEAPNTDMCLEIEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHCSFQDKFKKERLEQMQSKWNFVLNAVKNKPH
SIO_010081: Trpa1
subclass of: SO_0000673
so part of: Trpa1
location: join(12869653..12869763,12876201..12876360,12878040..12878215,12881914..12882021,12883467..12883575,12883738..12883883,12884751..12884887,12887312..12887360,12889047..12889146,12889710..12889810,12890943..12891112,12891196..12891360,12892643..12892757,12895894..12896060,12898265..12898358,12899247..12899306,12900258..12900356,12901456..12901526,12902051..12902213,12903111..12903200,12905051..12905220,12906971..12907100,12907606..12907788,12909196..12909264,12911873..12911983,12913554..12913651,12914313..12914511)
location: region:12869653-12914511:1
so has part: feature:12869653-12869763:1:exon
so has part: feature:12876201-12876360:1:exon
so has part: feature:12878040-12878215:1:exon
so has part: feature:12881914-12882021:1:exon
so has part: feature:12883467-12883575:1:exon
so has part: feature:12883738-12883883:1:exon
so has part: feature:12884751-12884887:1:exon
so has part: feature:12887312-12887360:1:exon
so has part: feature:12889047-12889146:1:exon
so has part: feature:12889710-12889810:1:exon
so has part: feature:12890943-12891112:1:exon
so has part: feature:12891196-12891360:1:exon
so has part: feature:12892643-12892757:1:exon
so has part: feature:12895894-12896060:1:exon
so has part: feature:12898265-12898358:1:exon
so has part: feature:12899247-12899306:1:exon
so has part: feature:12900258-12900356:1:exon
so has part: feature:12901456-12901526:1:exon
so has part: feature:12902051-12902213:1:exon
so has part: feature:12903111-12903200:1:exon
so has part: feature:12905051-12905220:1:exon
so has part: feature:12906971-12907100:1:exon
so has part: feature:12907606-12907788:1:exon
so has part: feature:12909196-12909264:1:exon
so has part: feature:12911873-12911983:1:exon
so has part: feature:12913554-12913651:1:exon
so has part: feature:12914313-12914511:1:exon

XP_005362408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12869653-12869763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12876201-12876360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12878040-12878215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12881914-12882021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12883467-12883575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12883738-12883883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12884751-12884887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12887312-12887360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12889047-12889146:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12889710-12889810:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12890943-12891112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12891196-12891360:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12892643-12892757:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12895894-12896060:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12898265-12898358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12899247-12899306:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12900258-12900356:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12901456-12901526:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12902051-12902213:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12903111-12903200:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12905051-12905220:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12906971-12907100:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:12907606-12907788:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:12909196-12909264:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:12911873-12911983:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:12913554-12913651:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:12914313-12914511:1:exon

Msc
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Msc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13024246..13026608
location: region:13024246-13026608:1
so has part: feature:13024246-13026608:1:exon
subclass of: SO_0000010

101998908
type: Gene
SIO_000068: ncbigene

position:13024246:1
position: 13024246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13026608:1
position: 13026608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13024246-13026608:1:exon

Msc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Msc
product: musculin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005361873.3
SIO_010081: Msc
subclass of: SO_0000673
so part of: Msc
location: join(13024246..13024952,13025668..13026608)
location: region:13024246-13026608:1
so has part: feature:13024246-13024952:1:exon
so has part: feature:13025668-13026608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13024246-13024952:1:exon

position:13024952:1
position: 13024952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13025668-13026608:1:exon

position:13025668:1
position: 13025668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Msc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Msc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: musculin
translation: MSTGSVSDPEDMEVRGLQRVYPTPSSKRPPLHDAERGYVSPSDNSSAEEEDPDGEEEPRSLGAAGIPGGCKRKRPRVAGPGGAGGGAGSGGKKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVNLTWPFVVSGRPDSDTKDVSAANRLCGTSA
SIO_010081: Msc
subclass of: SO_0000673
so part of: Msc
location: join(13024419..13024952,13025668..13025754)
location: region:13024419-13025754:1
so has part: feature:13024419-13024952:1:exon
so has part: feature:13025668-13025754:1:exon

XP_005361930.1
type: Protein
SIO_000068: ncbiprotein

position:13024419:1
position: 13024419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13025754:1
position: 13025754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13024419-13024952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13025668-13025754:1:exon

Eya1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13436369..13580638
location: region:13436369-13580638:1
so has part: feature:13436369-13580638:1:exon
subclass of: SO_0000010

101999190
type: Gene
SIO_000068: ncbigene

position:13436369:1
position: 13436369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13580638:1
position: 13580638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_013351920.2
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13436369..13436911,13442214..13442263,13443800..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13436369-13580638:1
so has part: feature:13436369-13436911:1:exon
so has part: feature:13442214-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13436911:1:exon

position:13436911:1
position: 13436911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13442214-13442263:1:exon

position:13442214:1
position: 13442214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13442263:1
position: 13442263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13443800-13443927:1:exon

position:13443800:1
position: 13443800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13443927:1
position: 13443927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13465649-13465726:1:exon

position:13465649:1
position: 13465649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13465726:1
position: 13465726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13476363-13476432:1:exon

position:13476363:1
position: 13476363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13476432:1
position: 13476432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13476758-13476903:1:exon

position:13476758:1
position: 13476758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13476903:1
position: 13476903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13479641-13479778:1:exon

position:13479641:1
position: 13479641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13479778:1
position: 13479778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13494280-13494362:1:exon

position:13494280:1
position: 13494280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13494362:1
position: 13494362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13494753-13494939:1:exon

position:13494753:1
position: 13494753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13494939:1
position: 13494939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13517179-13517318:1:exon

position:13517179:1
position: 13517179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13517318:1
position: 13517318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13519271-13519354:1:exon

position:13519271:1
position: 13519271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13519354:1
position: 13519354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13538895-13538984:1:exon

position:13538895:1
position: 13538895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13538984:1
position: 13538984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13565113-13565171:1:exon

position:13565113:1
position: 13565113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13565171:1
position: 13565171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13565283-13565443:1:exon

position:13565283:1
position: 13565283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13565443:1
position: 13565443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13566166-13566280:1:exon

position:13566166:1
position: 13566166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13566280:1
position: 13566280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13566384-13566505:1:exon

position:13566384:1
position: 13566384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13566505:1
position: 13566505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13569680-13569780:1:exon

position:13569680:1
position: 13569680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13569780:1
position: 13569780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13579378-13580638:1:exon

position:13579378:1
position: 13579378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005361874.3
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13436369..13436911,13442214..13442263,13443800..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479656..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13436369-13580638:1
so has part: feature:13436369-13436911:1:exon
so has part: feature:13442214-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479656-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13436911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13442214-13442263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13443800-13443927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13479656-13479778:1:exon

position:13479656:1
position: 13479656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_013351919.2
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13436369..13436911,13442214..13442263,13443800..13443927,13465649..13465726,13476363..13476432,13476761..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13436369-13580638:1
so has part: feature:13436369-13436911:1:exon
so has part: feature:13442214-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476761-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13436911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13442214-13442263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13443800-13443927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13476761-13476903:1:exon

position:13476761:1
position: 13476761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005361875.3
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13436369..13436911,13442214..13442263,13443800..13443927,13465649..13465726,13476363..13476432,13476761..13476903,13479656..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13436369-13580638:1
so has part: feature:13436369-13436911:1:exon
so has part: feature:13442214-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476761-13476903:1:exon
so has part: feature:13479656-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13436911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13442214-13442263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13443800-13443927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13476761-13476903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13479656-13479778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_013351921.2
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13436369..13436911,13442214..13442263,13443800..13443927,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13436369-13580638:1
so has part: feature:13436369-13436911:1:exon
so has part: feature:13442214-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13436911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13442214-13442263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13443800-13443927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026786810.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13436369..13436911,13442214..13442263,13443800..13443927,13476363..13476432,13476761..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13436369-13580638:1
so has part: feature:13436369-13436911:1:exon
so has part: feature:13442214-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476761-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13436911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13442214-13442263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13443800-13443927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13476761-13476903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005361876.3
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13436369..13436902,13442214..13442263,13443800..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13436369-13580638:1
so has part: feature:13436369-13436902:1:exon
so has part: feature:13442214-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13436369-13436902:1:exon

position:13436902:1
position: 13436902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13442214-13442263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13443800-13443927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_026786809.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13442047..13442263,13443800..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13442047-13580638:1
so has part: feature:13442047-13442263:1:exon
so has part: feature:13443800-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

position:13442047:1
position: 13442047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13442047-13442263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13443800-13443927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X1
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_026642610.1
type: Protein
SIO_000068: ncbiprotein

position:13443804:1
position: 13443804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13579458:1
position: 13579458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X1
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_005361933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X1
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_013207374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X3
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13465649..13465726,13476363..13476432,13476758..13476903,13479656..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479656-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_005361931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13479656-13479778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X2
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSKPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13465649..13465726,13476363..13476432,13476761..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476761-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_013207373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476761-13476903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X4
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSKPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13465649..13465726,13476363..13476432,13476761..13476903,13479656..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13465649-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476761-13476903:1:exon
so has part: feature:13479656-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_005361932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13465649-13465726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13476761-13476903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13479656-13479778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X5
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13476363..13476432,13476758..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476758-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_013207375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476758-13476903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X6
translation: MEMQDLTSPHNRLSGSSESPSGPKLDSAHINSTSMTPNGTEALGSSSFSPRPAHPFSPPQIYPSKPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13443804..13443927,13476363..13476432,13476761..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13443804-13579458:1
so has part: feature:13443804-13443927:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476761-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_026642611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443804-13443927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476761-13476903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026786812.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13465705..13465726,13476363..13476432,13476825..13476903,13479656..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13465705-13580638:1
so has part: feature:13465705-13465726:1:exon
so has part: feature:13476363-13476432:1:exon
so has part: feature:13476825-13476903:1:exon
so has part: feature:13479656-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

position:13465705:1
position: 13465705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13465705-13465726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13476363-13476432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13476825-13476903:1:exon

position:13476825:1
position: 13476825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13479656-13479778:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026786811.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13476372..13476432,13476825..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13580638)
location: region:13476372-13580638:1
so has part: feature:13476372-13476432:1:exon
so has part: feature:13476825-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13580638:1:exon

position:13476372:1
position: 13476372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13476372-13476432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13476825-13476903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13579378-13580638:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X7
translation: MQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13476837..13476903,13479641..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13476837-13579458:1
so has part: feature:13476837-13476903:1:exon
so has part: feature:13479641-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_026642612.1
type: Protein
SIO_000068: ncbiprotein

position:13476837:1
position: 13476837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13476837-13476903:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13479641-13479778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13579378-13579458:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X8
translation: MQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNASPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(13476837..13476903,13479656..13479778,13494280..13494362,13494753..13494939,13517179..13517318,13519271..13519354,13538895..13538984,13565113..13565171,13565283..13565443,13566166..13566280,13566384..13566505,13569680..13569780,13579378..13579458)
location: region:13476837-13579458:1
so has part: feature:13476837-13476903:1:exon
so has part: feature:13479656-13479778:1:exon
so has part: feature:13494280-13494362:1:exon
so has part: feature:13494753-13494939:1:exon
so has part: feature:13517179-13517318:1:exon
so has part: feature:13519271-13519354:1:exon
so has part: feature:13538895-13538984:1:exon
so has part: feature:13565113-13565171:1:exon
so has part: feature:13565283-13565443:1:exon
so has part: feature:13566166-13566280:1:exon
so has part: feature:13566384-13566505:1:exon
so has part: feature:13569680-13569780:1:exon
so has part: feature:13579378-13579458:1:exon

XP_026642613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13476837-13476903:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13479656-13479778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13494280-13494362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13494753-13494939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13517179-13517318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13519271-13519354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13538895-13538984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13565113-13565171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13565283-13565443:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13566166-13566280:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13566384-13566505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13569680-13569780:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13579378-13579458:1:exon

Xkr9
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13952991..13978757)
location: region:13952991-13978757:-1
so has part: feature:13952991-13978757:-1:exon
subclass of: SO_0000010

101999810
type: Gene
SIO_000068: ncbigene

position:13952991:-1
position: 13952991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13978757:-1
position: 13978757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13952991-13978757:-1:exon

Xkr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Xkr9
product: XK related 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005361877.2
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(13952991..13953619,13960362..13960582,13975050..13975681,13978726..13978757))
location: region:13952991-13978757:-1
so has part: feature:13978726-13978757:-1:exon
so has part: feature:13975050-13975681:-1:exon
so has part: feature:13960362-13960582:-1:exon
so has part: feature:13952991-13953619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13978726-13978757:-1:exon

position:13978726:-1
position: 13978726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13975050-13975681:-1:exon

position:13975050:-1
position: 13975050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13975681:-1
position: 13975681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13960362-13960582:-1:exon

position:13960362:-1
position: 13960362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13960582:-1
position: 13960582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13952991-13953619:-1:exon

position:13953619:-1
position: 13953619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Xkr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 9
translation: MKYTKCNFAVSVFGIIIYVADLVADILLSVRYFHDGHYVFGVLTLSFVLCGTVIVQCFSYSWLKDDLKKTRQENEHSFLLLHCLQGGVFTRYWFALRQGYQVVFKPSSRTSDFSEEQTDPHKEAIGIATDLSMLRLFEAYLESCPQLILQLYAFLERGQATLSQYAVIMASCFAISWSTVDYQIALRKSLPDKNHLSGLWPKLTYLFYKLFTLLSWMLSVVLLLFVDVKGALFLLSFLWIIGFIWAFIKQTQFCNSLHMEFLYRTVVGFILVFTFFNIKGQNTKCPMSCYYTVRVLGTLGILTVFWVYPLSIFNSDYFIPISAVIVLSLFLGIIFLTVYYGVFHPNRYVKTQHDETDGKPAQRDCRMRYFLMD
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(13952991..13953619,13960362..13960582,13975050..13975321))
location: region:13952991-13975321:-1
so has part: feature:13975050-13975321:-1:exon
so has part: feature:13960362-13960582:-1:exon
so has part: feature:13952991-13953619:-1:exon

XP_005361934.1
type: Protein
SIO_000068: ncbiprotein

position:13975321:-1
position: 13975321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13975050-13975321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13960362-13960582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13952991-13953619:-1:exon

Lactb2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lactb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13983514..14024763
location: region:13983514-14024763:1
so has part: feature:13983514-14024763:1:exon
subclass of: SO_0000010

102000084
type: Gene
SIO_000068: ncbigene

position:13983514:1
position: 13983514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14024763:1
position: 14024763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13983514-14024763:1:exon

Lactb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lactb2
product: lactamase beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005361878.3
SIO_010081: Lactb2
subclass of: SO_0000673
so part of: Lactb2
location: join(13983514..13983703,13990914..13991077,13993852..13993978,14008874..14009052,14018898..14019046,14023153..14023234,14024313..14024763)
location: region:13983514-14024763:1
so has part: feature:13983514-13983703:1:exon
so has part: feature:13990914-13991077:1:exon
so has part: feature:13993852-13993978:1:exon
so has part: feature:14008874-14009052:1:exon
so has part: feature:14018898-14019046:1:exon
so has part: feature:14023153-14023234:1:exon
so has part: feature:14024313-14024763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13983514-13983703:1:exon

position:13983703:1
position: 13983703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13990914-13991077:1:exon

position:13990914:1
position: 13990914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13991077:1
position: 13991077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13993852-13993978:1:exon

position:13993852:1
position: 13993852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13993978:1
position: 13993978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14008874-14009052:1:exon

position:14008874:1
position: 14008874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14009052:1
position: 14009052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14018898-14019046:1:exon

position:14018898:1
position: 14018898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14019046:1
position: 14019046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14023153-14023234:1:exon

position:14023153:1
position: 14023153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14023234:1
position: 14023234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14024313-14024763:1:exon

position:14024313:1
position: 14024313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lactb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lactb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoribonuclease LACTB2
translation: MATALQRIERLSSRVVRVLGCNPGPMTLQGTNTYLVGTGSRRILIDTGEPSVPEYISCLKQALVEFDTAIQEILVTHWHRDHSGGIVDICENISNDTTYCIKKLPRTPQKEEIIGNGEQQYVYIENGELIKTEGATLRVIHTPGHTDDHMALFLEEENAIFSGDCILGEGTTIFEDLYDYMNSLKNLLKIKADIIYPGHGPVIHNAEAKILEYISHRNKREEQVLTLIRDNFEKSFTVTELMKMIYKNVPENLQKMAEHNLLLHLKKLEREGKIFHTTEPGKKWRAVL
SIO_010081: Lactb2
subclass of: SO_0000673
so part of: Lactb2
location: join(13983582..13983703,13990914..13991077,13993852..13993978,14008874..14009052,14018898..14019046,14023153..14023234,14024313..14024356)
location: region:13983582-14024356:1
so has part: feature:13983582-13983703:1:exon
so has part: feature:13990914-13991077:1:exon
so has part: feature:13993852-13993978:1:exon
so has part: feature:14008874-14009052:1:exon
so has part: feature:14018898-14019046:1:exon
so has part: feature:14023153-14023234:1:exon
so has part: feature:14024313-14024356:1:exon

XP_005361935.1
type: Protein
SIO_000068: ncbiprotein

position:13983582:1
position: 13983582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14024356:1
position: 14024356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13983582-13983703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13990914-13991077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13993852-13993978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14008874-14009052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14018898-14019046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14023153-14023234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14024313-14024356:1:exon

Tram1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14058616..14088538
location: region:14058616-14088538:1
so has part: feature:14058616-14088538:1:exon
subclass of: SO_0000010

102000359
type: Gene
SIO_000068: ncbigene

position:14058616:1
position: 14058616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14088538:1
position: 14088538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14058616-14088538:1:exon

Tram1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tram1
product: translocation associated membrane protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_005361879.2
SIO_010081: Tram1
subclass of: SO_0000673
so part of: Tram1
location: join(14058616..14058917,14068046..14068109,14069343..14069464,14069575..14069691,14071941..14071999,14075647..14075731,14080003..14080073,14080172..14080276,14081597..14081740,14082060..14082220,14087032..14088538)
location: region:14058616-14088538:1
so has part: feature:14058616-14058917:1:exon
so has part: feature:14068046-14068109:1:exon
so has part: feature:14069343-14069464:1:exon
so has part: feature:14069575-14069691:1:exon
so has part: feature:14071941-14071999:1:exon
so has part: feature:14075647-14075731:1:exon
so has part: feature:14080003-14080073:1:exon
so has part: feature:14080172-14080276:1:exon
so has part: feature:14081597-14081740:1:exon
so has part: feature:14082060-14082220:1:exon
so has part: feature:14087032-14088538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14058616-14058917:1:exon

position:14058917:1
position: 14058917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14068046-14068109:1:exon

position:14068046:1
position: 14068046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14068109:1
position: 14068109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14069343-14069464:1:exon

position:14069343:1
position: 14069343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14069464:1
position: 14069464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14069575-14069691:1:exon

position:14069575:1
position: 14069575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14069691:1
position: 14069691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14071941-14071999:1:exon

position:14071941:1
position: 14071941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14071999:1
position: 14071999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14075647-14075731:1:exon

position:14075647:1
position: 14075647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14075731:1
position: 14075731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14080003-14080073:1:exon

position:14080003:1
position: 14080003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14080073:1
position: 14080073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14080172-14080276:1:exon

position:14080172:1
position: 14080172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14080276:1
position: 14080276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14081597-14081740:1:exon

position:14081597:1
position: 14081597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14081740:1
position: 14081740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14082060-14082220:1:exon

position:14082060:1
position: 14082060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14082220:1
position: 14082220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14087032-14088538:1:exon

position:14087032:1
position: 14087032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tram1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocating chain-associated membrane protein 1
translation: MAIRKKSNKNPPLLSHEFVLQNHADIVSCLAMLFLLGLMFEITAKAAIVFVALQYNVTRPATEEQATESASLYSYGFKDLATVFFYMLVAIIIHAIIQEYVLDKINRRMHFSKTKHSKFNESGQLSAFYLLACIWGTFILVSEDYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHALPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFYFSDEKYQKGFSVWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAVLASICITQAFMMWKFINFQLRRWREHSAFQAPPVKRKPVMTKGRSSRKGTENGVNGAVTSNGADSPRNRKEKSS
SIO_010081: Tram1
subclass of: SO_0000673
so part of: Tram1
location: join(14058795..14058917,14068046..14068109,14069343..14069464,14069575..14069691,14071941..14071999,14075647..14075731,14080003..14080073,14080172..14080276,14081597..14081740,14082060..14082220,14087032..14087105)
location: region:14058795-14087105:1
so has part: feature:14058795-14058917:1:exon
so has part: feature:14068046-14068109:1:exon
so has part: feature:14069343-14069464:1:exon
so has part: feature:14069575-14069691:1:exon
so has part: feature:14071941-14071999:1:exon
so has part: feature:14075647-14075731:1:exon
so has part: feature:14080003-14080073:1:exon
so has part: feature:14080172-14080276:1:exon
so has part: feature:14081597-14081740:1:exon
so has part: feature:14082060-14082220:1:exon
so has part: feature:14087032-14087105:1:exon

XP_005361936.1
type: Protein
SIO_000068: ncbiprotein

position:14058795:1
position: 14058795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14087105:1
position: 14087105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14058795-14058917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14068046-14068109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14069343-14069464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14069575-14069691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14071941-14071999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14075647-14075731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14080003-14080073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14080172-14080276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14081597-14081740:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14082060-14082220:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14087032-14087105:1:exon

LOC113457794
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457794
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 14258537..14258655
location: region:14258537-14258655:1
so has part: feature:14258537-14258655:1:exon

113457794
type: Gene
SIO_000068: ncbigene

position:14258537:1
position: 14258537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14258655:1
position: 14258655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14258537-14258655:1:exon

LOC113457794
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457794
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00561
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC113457794
subclass of: SO_0000673
so part of: LOC113457794
location: 14258537..14258655
location: region:14258537-14258655:1
so has part: feature:14258537-14258655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14258537-14258655:1:exon

Ncoa2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ncoa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14260792..14483605
location: region:14260792-14483605:1
so has part: feature:14260792-14483605:1:exon
subclass of: SO_0000010

102000647
type: Gene
SIO_000068: ncbigene

position:14260792:1
position: 14260792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14483605:1
position: 14483605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14260792-14483605:1:exon

Ncoa2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ncoa2
product: nuclear receptor coactivator 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005361880.3
SIO_010081: Ncoa2
subclass of: SO_0000673
so part of: Ncoa2
location: join(14260792..14260960,14344728..14344784,14401336..14401440,14404212..14404384,14433794..14433897,14437450..14437627,14439604..14439792,14443088..14443189,14443869..14444012,14447624..14447771,14449410..14450679,14456273..14456483,14457920..14458126,14460830..14461045,14463234..14463363,14470026..14470191,14473714..14473992,14474363..14474440,14475476..14475710,14477427..14477604,14478104..14478302,14479773..14479862,14481820..14483605)
location: region:14260792-14483605:1
so has part: feature:14260792-14260960:1:exon
so has part: feature:14344728-14344784:1:exon
so has part: feature:14401336-14401440:1:exon
so has part: feature:14404212-14404384:1:exon
so has part: feature:14433794-14433897:1:exon
so has part: feature:14437450-14437627:1:exon
so has part: feature:14439604-14439792:1:exon
so has part: feature:14443088-14443189:1:exon
so has part: feature:14443869-14444012:1:exon
so has part: feature:14447624-14447771:1:exon
so has part: feature:14449410-14450679:1:exon
so has part: feature:14456273-14456483:1:exon
so has part: feature:14457920-14458126:1:exon
so has part: feature:14460830-14461045:1:exon
so has part: feature:14463234-14463363:1:exon
so has part: feature:14470026-14470191:1:exon
so has part: feature:14473714-14473992:1:exon
so has part: feature:14474363-14474440:1:exon
so has part: feature:14475476-14475710:1:exon
so has part: feature:14477427-14477604:1:exon
so has part: feature:14478104-14478302:1:exon
so has part: feature:14479773-14479862:1:exon
so has part: feature:14481820-14483605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14260792-14260960:1:exon

position:14260960:1
position: 14260960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14344728-14344784:1:exon