Microtus ochrogaster isolate Prairie Vole_2 linkage group LG3, MicOch1.0, whole genome shotgun sequence.
type: Entry
definition: Microtus ochrogaster isolate Prairie Vole_2 linkage group LG3, MicOch1.0, whole genome shotgun sequence.
sequence version: NC_022029.1
sequence date: 2018-10-15
sequence: sequence
division: CON
label: NC_022029.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210839
dblink: SAMN00727831
keyword: WGS
keyword: RefSeq
source: Microtus ochrogaster (prairie vole)
organism: Microtus ochrogaster
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Arvicolinae; Microtus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001692.1.\nAssembly name: MicOch1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/12/07. The original whole-genome shotgun project has the\naccession AHZW00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: allpaths v. R41985 HAPLOIDIFY=True\n SPRS_WRITE_SEPS=True\nAssembly Name :: MicOch1.0\nGenome Coverage :: 94x\nSequencing Technology :: Illumina Hi-Seq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Microtus ochrogaster Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 48041176
topology: linear
so has quality: SO_0000987
location: 1..48041176
location: region:1-48041176:1
RO_0002162: 79684

NC_022029
type: RefSeq
SIO_000068: refseq

PRJNA210839
type: BioProject
SIO_000068: bioproject

SAMN00727831
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48041176:1
position: 48041176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-48041176:1:source
so part of: sequence
organism: Microtus ochrogaster
mol type: genomic DNA
isolate: Prairie Vole_2
sex: female
linkage group: LG3

79684
type: Taxonomy
SIO_000068: taxonomy

Taf2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Taf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35100..76657
location: region:35100-76657:1
so has part: feature:35100-76657:1:exon
subclass of: SO_0000010

102002031
type: Gene
SIO_000068: ncbigene

position:35100:1
position: 35100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76657:1
position: 76657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35100-76657:1:exon

Taf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Taf2
product: TATA-box binding protein associated factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005360608.3
SIO_010081: Taf2
subclass of: SO_0000673
so part of: Taf2
location: join(35100..35251,35876..35990,36685..36794,37533..37598,39163..39415,41443..41583,44798..44908,46539..46732,48420..48559,50927..50996,57258..57367,61525..61754,63635..63740,68798..68920,75120..76657)
location: region:35100-76657:1
so has part: feature:35100-35251:1:exon
so has part: feature:35876-35990:1:exon
so has part: feature:36685-36794:1:exon
so has part: feature:37533-37598:1:exon
so has part: feature:39163-39415:1:exon
so has part: feature:41443-41583:1:exon
so has part: feature:44798-44908:1:exon
so has part: feature:46539-46732:1:exon
so has part: feature:48420-48559:1:exon
so has part: feature:50927-50996:1:exon
so has part: feature:57258-57367:1:exon
so has part: feature:61525-61754:1:exon
so has part: feature:63635-63740:1:exon
so has part: feature:68798-68920:1:exon
so has part: feature:75120-76657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35100-35251:1:exon

position:35251:1
position: 35251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35876-35990:1:exon

position:35876:1
position: 35876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35990:1
position: 35990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36685-36794:1:exon

position:36685:1
position: 36685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36794:1
position: 36794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:37533-37598:1:exon

position:37533:1
position: 37533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37598:1
position: 37598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39163-39415:1:exon

position:39163:1
position: 39163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39415:1
position: 39415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41443-41583:1:exon

position:41443:1
position: 41443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41583:1
position: 41583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44798-44908:1:exon

position:44798:1
position: 44798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44908:1
position: 44908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46539-46732:1:exon

position:46539:1
position: 46539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46732:1
position: 46732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:48420-48559:1:exon

position:48420:1
position: 48420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48559:1
position: 48559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:50927-50996:1:exon

position:50927:1
position: 50927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50996:1
position: 50996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:57258-57367:1:exon

position:57258:1
position: 57258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57367:1
position: 57367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:61525-61754:1:exon

position:61525:1
position: 61525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61754:1
position: 61754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:63635-63740:1:exon

position:63635:1
position: 63635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63740:1
position: 63740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:68798-68920:1:exon

position:68798:1
position: 68798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68920:1
position: 68920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:75120-76657:1:exon

position:75120:1
position: 75120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Taf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Taf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 2
translation: MWSQMLVSTYGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVVAQQESILALEKFPTPASRLALTDILEQEQCFYRVRMAACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDSSLFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWLLNMIQTDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTAHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPETGAGAQESASNAGCHAQLAGFQNPFSSSQDEEEVDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPSSSRSSLMPQHSLGCDIIPPTKPPWSMELSRKGIGKEQPLEMGVHSMVAAPLSVFAKESTSSRHSEHHHHHHHEHKKKKKKHKHKHKHKHKHDSKDKDKEPFAFSSPASGRSVRSPSLSD
SIO_010081: Taf2
subclass of: SO_0000673
so part of: Taf2
location: join(35157..35251,35876..35990,36685..36794,37533..37598,39163..39415,41443..41583,44798..44908,46539..46732,48420..48559,50927..50996,57258..57367,61525..61754,63635..63740,68798..68920,75120..75379)
location: region:35157-75379:1
so has part: feature:35157-35251:1:exon
so has part: feature:35876-35990:1:exon
so has part: feature:36685-36794:1:exon
so has part: feature:37533-37598:1:exon
so has part: feature:39163-39415:1:exon
so has part: feature:41443-41583:1:exon
so has part: feature:44798-44908:1:exon
so has part: feature:46539-46732:1:exon
so has part: feature:48420-48559:1:exon
so has part: feature:50927-50996:1:exon
so has part: feature:57258-57367:1:exon
so has part: feature:61525-61754:1:exon
so has part: feature:63635-63740:1:exon
so has part: feature:68798-68920:1:exon
so has part: feature:75120-75379:1:exon

XP_005360665.2
type: Protein
SIO_000068: ncbiprotein

position:35157:1
position: 35157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75379:1
position: 75379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35157-35251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35876-35990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36685-36794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37533-37598:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39163-39415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41443-41583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44798-44908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46539-46732:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48420-48559:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:50927-50996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57258-57367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:61525-61754:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63635-63740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68798-68920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75120-75379:1:exon

Enpp2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Enpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123094..233108
location: region:123094-233108:1
so has part: feature:123094-233108:1:exon
subclass of: SO_0000010

102000272
type: Gene
SIO_000068: ncbigene

position:123094:1
position: 123094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233108:1
position: 233108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123094-233108:1:exon

Enpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enpp2
product: ectonucleotide pyrophosphatase/phosphodiesterase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026785953.1
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(123094..123281,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210348,212346..212397,220800..220874,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..233108)
location: region:123094-233108:1
so has part: feature:123094-123281:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210348:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:220800-220874:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-233108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123094-123281:1:exon

position:123281:1
position: 123281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

position:154181:1
position: 154181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154280:1
position: 154280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

position:164805:1
position: 164805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164960:1
position: 164960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

position:168255:1
position: 168255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168380:1
position: 168380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

position:171768:1
position: 171768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171828:1
position: 171828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

position:173326:1
position: 173326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173423:1
position: 173423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

position:173688:1
position: 173688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173767:1
position: 173767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

position:175775:1
position: 175775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175894:1
position: 175894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

position:183593:1
position: 183593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183648:1
position: 183648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

position:188685:1
position: 188685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188750:1
position: 188750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

position:189551:1
position: 189551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189623:1
position: 189623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

position:196331:1
position: 196331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196439:1
position: 196439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

position:202172:1
position: 202172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202297:1
position: 202297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

position:205731:1
position: 205731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205762:1
position: 205762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

position:206477:1
position: 206477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206604:1
position: 206604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

position:208775:1
position: 208775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208862:1
position: 208862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

position:208996:1
position: 208996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209083:1
position: 209083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210348:1:exon

position:210164:1
position: 210164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210348:1
position: 210348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

position:212346:1
position: 212346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212397:1
position: 212397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:220800-220874:1:exon

position:220800:1
position: 220800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220874:1
position: 220874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:222097-222233:1:exon

position:222097:1
position: 222097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222233:1
position: 222233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:224185-224320:1:exon

position:224185:1
position: 224185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224320:1
position: 224320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:225197-225274:1:exon

position:225197:1
position: 225197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225274:1
position: 225274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:226619-226751:1:exon

position:226619:1
position: 226619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226751:1
position: 226751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:228022-228178:1:exon

position:228022:1
position: 228022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228178:1
position: 228178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:232510-233108:1:exon

position:232510:1
position: 232510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Enpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X5
translation: MSRHATDRVISLFTFAIGVNICLGFTASRIKRAEWDEGPLTALSDSPWTNTSGSCKGRCFELQEVGPPDCRCDNLCKSYSSCCHDFDELCLKTARGWECTKDRCGEVRNEENACHCSEDCLSRGDCCTNYQVVCKGESHWVDDDCEEIKVPECPAGFVRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTFFWSVTIPHERRILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRSKFSNNPKYDPKAIIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDIHLLVDRRWHIARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYGPTFKYRTKVPPFENIELYNVMCDLLGLKPAPNNGTHGSLNHLLRTNTFRPTIPEEVTRPNYPGIMYLQSDFDLGCNCDDKVEPKNKLEELNKRLHTKGSTEAATRKFRGSQNENKKNLNGNFELRKERHLLYGRPAVLYRTRYDILYHTDFESGYSEIFLMPLWMSYTVSKQAEVSSIPEHLTNCVRPDVRVSPGFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKRIWTYFQRVLVKKYASERNGVNVISGPVFDYNYDGLRDTEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEDLMKMHTARVRDIEHLTGLDFYRKTSRSYSEILALKTYLHTYESEI
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(123258..123281,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210348,212346..212397,220800..220874,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..232680)
location: region:123258-232680:1
so has part: feature:123258-123281:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210348:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:220800-220874:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-232680:1:exon

XP_026641754.1
type: Protein
SIO_000068: ncbiprotein

position:123258:1
position: 123258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232680:1
position: 232680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123258-123281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:220800-220874:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:232510-232680:1:exon

Enpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enpp2
product: ectonucleotide pyrophosphatase/phosphodiesterase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005360517.1
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153694..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210348,212346..212397,220800..220874,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..233108)
location: region:153694-233108:1
so has part: feature:153694-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210348:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:220800-220874:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-233108:1:exon

position:153694:1
position: 153694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153694-153945:1:exon

position:153945:1
position: 153945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:220800-220874:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:232510-233108:1:exon

Enpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enpp2
product: ectonucleotide pyrophosphatase/phosphodiesterase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005360518.1
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153694..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210348,212346..212397,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..233108)
location: region:153694-233108:1
so has part: feature:153694-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210348:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-233108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153694-153945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:232510-233108:1:exon

Enpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enpp2
product: ectonucleotide pyrophosphatase/phosphodiesterase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_026785952.1
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153694..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210336,212346..212397,220800..220874,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..233108)
location: region:153694-233108:1
so has part: feature:153694-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210336:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:220800-220874:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-233108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153694-153945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210336:1:exon

position:210336:1
position: 210336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:220800-220874:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:232510-233108:1:exon

Enpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enpp2
product: ectonucleotide pyrophosphatase/phosphodiesterase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_013351277.1
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153694..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210336,212346..212397,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..233108)
location: region:153694-233108:1
so has part: feature:153694-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210336:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-233108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153694-153945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210336:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:232510-233108:1:exon

Enpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X1
translation: MARKGSFGSHQVISLFTFAIGVNICLGFTASRIKRAEWDEGPLTALSDSPWTNTSGSCKGRCFELQEVGPPDCRCDNLCKSYSSCCHDFDELCLKTARGWECTKDRCGEVRNEENACHCSEDCLSRGDCCTNYQVVCKGESHWVDDDCEEIKVPECPAGFVRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTFFWSVTIPHERRILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRSKFSNNPKYDPKAIIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDIHLLVDRRWHIARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYGPTFKYRTKVPPFENIELYNVMCDLLGLKPAPNNGTHGSLNHLLRTNTFRPTIPEEVTRPNYPGIMYLQSDFDLGCNCDDKVEPKNKLEELNKRLHTKGSTEAATRKFRGSQNENKKNLNGNFELRKERHLLYGRPAVLYRTRYDILYHTDFESGYSEIFLMPLWMSYTVSKQAEVSSIPEHLTNCVRPDVRVSPGFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKRIWTYFQRVLVKKYASERNGVNVISGPVFDYNYDGLRDTEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEDLMKMHTARVRDIEHLTGLDFYRKTSRSYSEILALKTYLHTYESEI
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153913..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210348,212346..212397,220800..220874,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..232680)
location: region:153913-232680:1
so has part: feature:153913-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210348:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:220800-220874:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-232680:1:exon

XP_005360574.1
type: Protein
SIO_000068: ncbiprotein

position:153913:1
position: 153913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153913-153945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:220800-220874:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:232510-232680:1:exon

Enpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X3
translation: MARKGSFGSHQVISLFTFAIGVNICLGFTASRIKRAEWDEGPLTALSDSPWTNTSGSCKGRCFELQEVGPPDCRCDNLCKSYSSCCHDFDELCLKTARGWECTKDRCGEVRNEENACHCSEDCLSRGDCCTNYQVVCKGESHWVDDDCEEIKVPECPAGFVRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTFFWSVTIPHERRILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRSKFSNNPKYDPKAIIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDIHLLVDRRWHIARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYGPTFKYRTKVPPFENIELYNVMCDLLGLKPAPNNGTHGSLNHLLRTNTFRPTIPEEVTRPNYPGIMYLQSDFDLGCNCDDKVEPKNKLEELNKRLHTKGSTEERHLLYGRPAVLYRTRYDILYHTDFESGYSEIFLMPLWMSYTVSKQAEVSSIPEHLTNCVRPDVRVSPGFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKRIWTYFQRVLVKKYASERNGVNVISGPVFDYNYDGLRDTEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEDLMKMHTARVRDIEHLTGLDFYRKTSRSYSEILALKTYLHTYESEI
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153913..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210348,212346..212397,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..232680)
location: region:153913-232680:1
so has part: feature:153913-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210348:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-232680:1:exon

XP_005360575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153913-153945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:232510-232680:1:exon

Enpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X2
translation: MARKGSFGSHQVISLFTFAIGVNICLGFTASRIKRAEWDEGPLTALSDSPWTNTSGSCKGRCFELQEVGPPDCRCDNLCKSYSSCCHDFDELCLKTARGWECTKDRCGEVRNEENACHCSEDCLSRGDCCTNYQVVCKGESHWVDDDCEEIKVPECPAGFVRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTFFWSVTIPHERRILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRSKFSNNPKYDPKAIIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDIHLLVDRRWHIARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYGPTFKYRTKVPPFENIELYNVMCDLLGLKPAPNNGTHGSLNHLLRTNTFRPTIPEEVTRPNYPGIMYLQSDFDLGCNCDDKNKLEELNKRLHTKGSTEAATRKFRGSQNENKKNLNGNFELRKERHLLYGRPAVLYRTRYDILYHTDFESGYSEIFLMPLWMSYTVSKQAEVSSIPEHLTNCVRPDVRVSPGFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKRIWTYFQRVLVKKYASERNGVNVISGPVFDYNYDGLRDTEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEDLMKMHTARVRDIEHLTGLDFYRKTSRSYSEILALKTYLHTYESEI
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153913..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210336,212346..212397,220800..220874,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..232680)
location: region:153913-232680:1
so has part: feature:153913-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210336:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:220800-220874:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-232680:1:exon

XP_026641753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153913-153945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210336:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:220800-220874:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:232510-232680:1:exon

Enpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X4
translation: MARKGSFGSHQVISLFTFAIGVNICLGFTASRIKRAEWDEGPLTALSDSPWTNTSGSCKGRCFELQEVGPPDCRCDNLCKSYSSCCHDFDELCLKTARGWECTKDRCGEVRNEENACHCSEDCLSRGDCCTNYQVVCKGESHWVDDDCEEIKVPECPAGFVRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTFFWSVTIPHERRILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRSKFSNNPKYDPKAIIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDIHLLVDRRWHIARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYGPTFKYRTKVPPFENIELYNVMCDLLGLKPAPNNGTHGSLNHLLRTNTFRPTIPEEVTRPNYPGIMYLQSDFDLGCNCDDKNKLEELNKRLHTKGSTEERHLLYGRPAVLYRTRYDILYHTDFESGYSEIFLMPLWMSYTVSKQAEVSSIPEHLTNCVRPDVRVSPGFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKRIWTYFQRVLVKKYASERNGVNVISGPVFDYNYDGLRDTEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEDLMKMHTARVRDIEHLTGLDFYRKTSRSYSEILALKTYLHTYESEI
SIO_010081: Enpp2
subclass of: SO_0000673
so part of: Enpp2
location: join(153913..153945,154181..154280,164805..164960,168255..168380,171768..171828,173326..173423,173688..173767,175775..175894,183593..183648,188685..188750,189551..189623,196331..196439,202172..202297,205731..205762,206477..206604,208775..208862,208996..209083,210164..210336,212346..212397,222097..222233,224185..224320,225197..225274,226619..226751,228022..228178,232510..232680)
location: region:153913-232680:1
so has part: feature:153913-153945:1:exon
so has part: feature:154181-154280:1:exon
so has part: feature:164805-164960:1:exon
so has part: feature:168255-168380:1:exon
so has part: feature:171768-171828:1:exon
so has part: feature:173326-173423:1:exon
so has part: feature:173688-173767:1:exon
so has part: feature:175775-175894:1:exon
so has part: feature:183593-183648:1:exon
so has part: feature:188685-188750:1:exon
so has part: feature:189551-189623:1:exon
so has part: feature:196331-196439:1:exon
so has part: feature:202172-202297:1:exon
so has part: feature:205731-205762:1:exon
so has part: feature:206477-206604:1:exon
so has part: feature:208775-208862:1:exon
so has part: feature:208996-209083:1:exon
so has part: feature:210164-210336:1:exon
so has part: feature:212346-212397:1:exon
so has part: feature:222097-222233:1:exon
so has part: feature:224185-224320:1:exon
so has part: feature:225197-225274:1:exon
so has part: feature:226619-226751:1:exon
so has part: feature:228022-228178:1:exon
so has part: feature:232510-232680:1:exon

XP_013206731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153913-153945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154181-154280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164805-164960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168255-168380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171768-171828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173326-173423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173688-173767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175775-175894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183593-183648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188685-188750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189551-189623:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196331-196439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202172-202297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205731-205762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206477-206604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208775-208862:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208996-209083:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:210164-210336:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212346-212397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:222097-222233:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224185-224320:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:225197-225274:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:226619-226751:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228022-228178:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:232510-232680:1:exon

Ccn3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ccn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307616..315444)
location: region:307616-315444:-1
so has part: feature:307616-315444:-1:exon
subclass of: SO_0000010

102001486
type: Gene
SIO_000068: ncbigene

position:307616:-1
position: 307616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315444:-1
position: 315444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307616-315444:-1:exon

Ccn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ccn3
product: cellular communication network factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013351258.2
SIO_010081: Ccn3
subclass of: SO_0000673
so part of: Ccn3
location: complement(join(307616..309101,311906..312120,313305..313557,314763..314987,315117..315444))
location: region:307616-315444:-1
so has part: feature:315117-315444:-1:exon
so has part: feature:314763-314987:-1:exon
so has part: feature:313305-313557:-1:exon
so has part: feature:311906-312120:-1:exon
so has part: feature:307616-309101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315117-315444:-1:exon

position:315117:-1
position: 315117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314763-314987:-1:exon

position:314763:-1
position: 314763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314987:-1
position: 314987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313305-313557:-1:exon

position:313305:-1
position: 313305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313557:-1
position: 313557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311906-312120:-1:exon

position:311906:-1
position: 311906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312120:-1
position: 312120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307616-309101:-1:exon

position:309101:-1
position: 309101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ccn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ccn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NOV homolog
translation: MWRMQIASAFLRKRCLCLGFLLFLLLNQVSATQRCPSSCPLLCPTTPPTCAPGVRSVLDGCSCCLVCARQRGESCSELKPCDQSSGLYCDRSADPSNQTGICMXXXXXXCVFDGVIYRSGEKFEPNCQYHCTCRDGQIGCVPRCQLDVLLPGPDCPAPRKVAVPGECCEKWTCGPNEQGTLGGLALPAYRPEATVGVEVSDSSINCIEQTTEWSACSKSCGMGLSTRVTNRNRQCEMVKQSRLCMVRPCEQEPTPSTDKKGKKCLRTKKSLKAIHLQYKNCTSLHTYKPRFCGVCSDGRCCTPHNTKTIQVQFQCSPGQSIKKPVMVIGTCTCHSNCPQNNEAFLQELELKTSGGEM
SIO_010081: Ccn3
subclass of: SO_0000673
so part of: Ccn3
location: complement(join(308805..309101,311906..312120,313305..313557,314763..314987,315117..315200))
location: region:308805-315200:-1
so has part: feature:315117-315200:-1:exon
so has part: feature:314763-314987:-1:exon
so has part: feature:313305-313557:-1:exon
so has part: feature:311906-312120:-1:exon
so has part: feature:308805-309101:-1:exon

XP_013206712.1
type: Protein
SIO_000068: ncbiprotein

position:308805:-1
position: 308805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315200:-1
position: 315200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315117-315200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314763-314987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313305-313557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311906-312120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308805-309101:-1:exon

LOC102001762
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102001762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(348734..349246)
location: region:348734-349246:-1
so has part: feature:348734-349246:-1:exon
subclass of: SO_0000010

102001762
type: Gene
SIO_000068: ncbigene

position:348734:-1
position: 348734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349246:-1
position: 349246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348734-349246:-1:exon

LOC102001762
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC102001762
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360521.1
SIO_010081: LOC102001762
subclass of: SO_0000673
so part of: LOC102001762
location: complement(348734..349246)
location: region:348734-349246:-1
so has part: feature:348734-349246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348734-349246:-1:exon

LOC102001762
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC102001762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-like
translation: MAQRLLRAYDEIPDGTQCHRKTYITTAFGGLIGAIGSAYSVVLNPADTHLEAVARAGRYTFTAAAVGAMFGLATCVSAQVREKPDDPLNYFIGGCAAGLTLGARTHNYGTAATGCVYMGTAAALFKMGKLEGWELFASPKV
SIO_010081: LOC102001762
subclass of: SO_0000673
so part of: LOC102001762
location: complement(348771..349196)
location: region:348771-349196:-1
so has part: feature:348771-349196:-1:exon

XP_005360578.1
type: Protein
SIO_000068: ncbiprotein

position:348771:-1
position: 348771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349196:-1
position: 349196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348771-349196:-1:exon

Mal2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mal2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(411270..438862)
location: region:411270-438862:-1
so has part: feature:411270-438862:-1:exon
subclass of: SO_0000010

102002309
type: Gene
SIO_000068: ncbigene

position:411270:-1
position: 411270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438862:-1
position: 438862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411270-438862:-1:exon

Mal2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mal2
product: mal, T cell differentiation protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026785839.1
SIO_010081: Mal2
subclass of: SO_0000673
so part of: Mal2
location: complement(join(411270..413457,416968..417123,438547..438862))
location: region:411270-438862:-1
so has part: feature:438547-438862:-1:exon
so has part: feature:416968-417123:-1:exon
so has part: feature:411270-413457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438547-438862:-1:exon

position:438547:-1
position: 438547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416968-417123:-1:exon

position:416968:-1
position: 416968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417123:-1
position: 417123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:411270-413457:-1:exon

position:413457:-1
position: 413457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mal2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mal2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MAL2
translation: MSAGGAVPPPPNPAVSFPAPRITLPAGPDILRTYSGAFVCLEIVSGAAWATIEPQKQGQDFVYHFVVFVFYFGAFLLEAAATSLHDLQCNTTMTVQPLLDDNQYNVNVAATVFTFMTTACYGCSLVLALRRWRP
SIO_010081: Mal2
subclass of: SO_0000673
so part of: Mal2
location: complement(join(413386..413457,416968..417123,438547..438723))
location: region:413386-438723:-1
so has part: feature:438547-438723:-1:exon
so has part: feature:416968-417123:-1:exon
so has part: feature:413386-413457:-1:exon

XP_026641640.1
type: Protein
SIO_000068: ncbiprotein

position:413386:-1
position: 413386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438723:-1
position: 438723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438547-438723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416968-417123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413386-413457:-1:exon

Colec10
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Colec10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(499174..538475)
location: region:499174-538475:-1
so has part: feature:499174-538475:-1:exon
subclass of: SO_0000010

102002030
type: Gene
SIO_000068: ncbigene

position:499174:-1
position: 499174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538475:-1
position: 538475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499174-538475:-1:exon

Colec10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Colec10
product: collectin subfamily member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005360522.2
SIO_010081: Colec10
subclass of: SO_0000673
so part of: Colec10
location: complement(join(499174..501757,505325..505420,506977..507030,516777..516848,519211..519282,538253..538475))
location: region:499174-538475:-1
so has part: feature:538253-538475:-1:exon
so has part: feature:519211-519282:-1:exon
so has part: feature:516777-516848:-1:exon
so has part: feature:506977-507030:-1:exon
so has part: feature:505325-505420:-1:exon
so has part: feature:499174-501757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538253-538475:-1:exon

position:538253:-1
position: 538253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519211-519282:-1:exon

position:519211:-1
position: 519211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519282:-1
position: 519282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516777-516848:-1:exon

position:516777:-1
position: 516777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516848:-1
position: 516848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:506977-507030:-1:exon

position:506977:-1
position: 506977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507030:-1
position: 507030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:505325-505420:-1:exon

position:505325:-1
position: 505325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505420:-1
position: 505420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:499174-501757:-1:exon

position:501757:-1
position: 501757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Colec10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Colec10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collectin-10
translation: MSWRPSFEETADMNGFNVLLRGNQFILLLLLLLQVQSLGLDIDSRPAAEVCATHAISPGPKGKDGEKGDTGEEGKDGKVGRRGPKGVKGDLGDMGPQGNIGKSGPIGKKGDKGEKGLLGIPGEKGKAGTICDCGRYRKVVGQLDISVARLKTSMKFIKNVIAGIRETEEKFYYIVQEEKNYRESLTHCRIRGGMLAMPKDEAVNTLIADYVAKSGFFRVFIGVNDLEREGQHVFTDNSPLQNYSNWKEGEPSDPYGHEDCVEMLSSGRWNDTECHLTMYFVCEFVKKKR
SIO_010081: Colec10
subclass of: SO_0000673
so part of: Colec10
location: complement(join(501366..501757,505325..505420,506977..507030,516777..516848,519211..519282,538253..538436))
location: region:501366-538436:-1
so has part: feature:538253-538436:-1:exon
so has part: feature:519211-519282:-1:exon
so has part: feature:516777-516848:-1:exon
so has part: feature:506977-507030:-1:exon
so has part: feature:505325-505420:-1:exon
so has part: feature:501366-501757:-1:exon

XP_005360579.1
type: Protein
SIO_000068: ncbiprotein

position:501366:-1
position: 501366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538436:-1
position: 538436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538253-538436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519211-519282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516777-516848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506977-507030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505325-505420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501366-501757:-1:exon

Tnfrsf11b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tnfrsf11b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 635475..662847
location: region:635475-662847:1
so has part: feature:635475-662847:1:exon
subclass of: SO_0000010

102002308
type: Gene
SIO_000068: ncbigene

position:635475:1
position: 635475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662847:1
position: 662847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635475-662847:1:exon

Tnfrsf11b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnfrsf11b
product: TNF receptor superfamily member 11b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005360523.3
SIO_010081: Tnfrsf11b
subclass of: SO_0000673
so part of: Tnfrsf11b
location: join(635475..635712,653240..653606,657584..657775,659319..659543,661214..662847)
location: region:635475-662847:1
so has part: feature:635475-635712:1:exon
so has part: feature:653240-653606:1:exon
so has part: feature:657584-657775:1:exon
so has part: feature:659319-659543:1:exon
so has part: feature:661214-662847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:635475-635712:1:exon

position:635712:1
position: 635712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653240-653606:1:exon

position:653240:1
position: 653240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653606:1
position: 653606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657584-657775:1:exon

position:657584:1
position: 657584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657775:1
position: 657775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:659319-659543:1:exon

position:659319:1
position: 659319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659543:1
position: 659543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:661214-662847:1:exon

position:661214:1
position: 661214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tnfrsf11b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnfrsf11b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 11B
translation: MNKWLYCALLVLLDIPEWTTQEPVPPKYLHYDGESERQILCDKCPPGTYLKQHCTVRRKTLCVPCPDHSYSDSWHTSDECVYCSPVCKELQSVKQECNRTHNRVCECQEGRYLELEFCLKHRSCAPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKDPCRKHTNCSALGLLLIQRGNASHDNVCSGNREASQKCGIDVTLCEEAFFRFAVPTKLTPNWLSVLVDNLPGMKVNTESVERIKRRHSSQEQTFQLLKLWKHQNKDQDLVKKIIQDIDLCESSVQRHIGHANLTAEQLHVLMESLPGKKIGPEDIESTRKTCKPSEQLLKLLSLWRIKNGDQDSLKGLMYALKHLKTHHFPKTVTHSLRKTIRFLHSFTMYRLYQKLFLEMIGNQVQSVKISCL
SIO_010081: Tnfrsf11b
subclass of: SO_0000673
so part of: Tnfrsf11b
location: join(635680..635712,653240..653606,657584..657775,659319..659543,661214..661602)
location: region:635680-661602:1
so has part: feature:635680-635712:1:exon
so has part: feature:653240-653606:1:exon
so has part: feature:657584-657775:1:exon
so has part: feature:659319-659543:1:exon
so has part: feature:661214-661602:1:exon

XP_005360580.1
type: Protein
SIO_000068: ncbiprotein

position:635680:1
position: 635680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661602:1
position: 661602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635680-635712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653240-653606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657584-657775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659319-659543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661214-661602:1:exon

Samd12
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Samd12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 889774..1266866
location: region:889774-1266866:1
so has part: feature:889774-1266866:1:exon
subclass of: SO_0000010

102002593
type: Gene
SIO_000068: ncbigene

position:889774:1
position: 889774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266866:1
position: 1266866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889774-1266866:1:exon

Samd12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Samd12
product: sterile alpha motif domain containing 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_013351260.2
SIO_010081: Samd12
subclass of: SO_0000673
so part of: Samd12
location: join(889774..889897,924682..924860,1043582..1043711,1092306..1092446,1265469..1266866)
location: region:889774-1266866:1
so has part: feature:889774-889897:1:exon
so has part: feature:924682-924860:1:exon
so has part: feature:1043582-1043711:1:exon
so has part: feature:1092306-1092446:1:exon
so has part: feature:1265469-1266866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:889774-889897:1:exon

position:889897:1
position: 889897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924682-924860:1:exon

position:924682:1
position: 924682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924860:1
position: 924860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1043582-1043711:1:exon

position:1043582:1
position: 1043582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043711:1
position: 1043711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1092306-1092446:1:exon

position:1092306:1
position: 1092306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092446:1
position: 1092446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1265469-1266866:1:exon

position:1265469:1
position: 1265469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Samd12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Samd12
product: sterile alpha motif domain containing 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_026785912.1
SIO_010081: Samd12
subclass of: SO_0000673
so part of: Samd12
location: join(889774..889897,924682..924860,1043582..1043681,1092306..1092446,1265469..1266866)
location: region:889774-1266866:1
so has part: feature:889774-889897:1:exon
so has part: feature:924682-924860:1:exon
so has part: feature:1043582-1043681:1:exon
so has part: feature:1092306-1092446:1:exon
so has part: feature:1265469-1266866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:889774-889897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924682-924860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043582-1043681:1:exon

position:1043681:1
position: 1043681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1092306-1092446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265469-1266866:1:exon

Samd12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Samd12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 12 isoform X1
translation: MAVEALHCGLNPRGIDHPAHAEGIKLQLEAEGVESQSIKNKNFQKVPDQKGTPKRLQGEAETAKLATVKLSKPVALWTQQDVCKWLKKHCPNQYQIYSESFKQHDITGRALLRLTDKKLERMGILQENQRQHVLQQVLQLKVREEVRNLQLLTQASVESSP
SIO_010081: Samd12
subclass of: SO_0000673
so part of: Samd12
location: join(889885..889897,924682..924860,1043582..1043711,1092306..1092446,1265469..1265491)
location: region:889885-1265491:1
so has part: feature:889885-889897:1:exon
so has part: feature:924682-924860:1:exon
so has part: feature:1043582-1043711:1:exon
so has part: feature:1092306-1092446:1:exon
so has part: feature:1265469-1265491:1:exon

XP_013206714.2
type: Protein
SIO_000068: ncbiprotein

position:889885:1
position: 889885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265491:1
position: 1265491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889885-889897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924682-924860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043582-1043711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092306-1092446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265469-1265491:1:exon

Samd12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Samd12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 12 isoform X2
translation: MAVEALHCGLNPRGIDHPAHAEGIKLQLEAEGVESQSIKNKNFQKVPDQKGTPKRLQGEAETAKLATVKLSKPVALWTQQDVCKWLKKHCPNQYQIYRRALLRLTDKKLERMGILQENQRQHVLQQVLQLKVREEVRNLQLLTQASVESSP
SIO_010081: Samd12
subclass of: SO_0000673
so part of: Samd12
location: join(889885..889897,924682..924860,1043582..1043681,1092306..1092446,1265469..1265491)
location: region:889885-1265491:1
so has part: feature:889885-889897:1:exon
so has part: feature:924682-924860:1:exon
so has part: feature:1043582-1043681:1:exon
so has part: feature:1092306-1092446:1:exon
so has part: feature:1265469-1265491:1:exon

XP_026641713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:889885-889897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924682-924860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043582-1043681:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092306-1092446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265469-1265491:1:exon

Ext1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ext1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1359795..1651229
location: region:1359795-1651229:1
so has part: feature:1359795-1651229:1:exon
subclass of: SO_0000010

102002870
type: Gene
SIO_000068: ncbigene

position:1359795:1
position: 1359795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651229:1
position: 1651229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359795-1651229:1:exon

Ext1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ext1
product: exostosin glycosyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005360525.3
SIO_010081: Ext1
subclass of: SO_0000673
so part of: Ext1
location: join(1359795..1361420,1611366..1611459,1612926..1613033,1617288..1617407,1625963..1626095,1627441..1627559,1629334..1629429,1634536..1634625,1640379..1640539,1642873..1643044,1647834..1651229)
location: region:1359795-1651229:1
so has part: feature:1359795-1361420:1:exon
so has part: feature:1611366-1611459:1:exon
so has part: feature:1612926-1613033:1:exon
so has part: feature:1617288-1617407:1:exon
so has part: feature:1625963-1626095:1:exon
so has part: feature:1627441-1627559:1:exon
so has part: feature:1629334-1629429:1:exon
so has part: feature:1634536-1634625:1:exon
so has part: feature:1640379-1640539:1:exon
so has part: feature:1642873-1643044:1:exon
so has part: feature:1647834-1651229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1359795-1361420:1:exon

position:1361420:1
position: 1361420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1611366-1611459:1:exon

position:1611366:1
position: 1611366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1611459:1
position: 1611459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1612926-1613033:1:exon

position:1612926:1
position: 1612926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613033:1
position: 1613033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1617288-1617407:1:exon

position:1617288:1
position: 1617288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617407:1
position: 1617407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1625963-1626095:1:exon

position:1625963:1
position: 1625963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626095:1
position: 1626095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1627441-1627559:1:exon

position:1627441:1
position: 1627441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627559:1
position: 1627559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1629334-1629429:1:exon

position:1629334:1
position: 1629334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629429:1
position: 1629429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1634536-1634625:1:exon

position:1634536:1
position: 1634536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634625:1
position: 1634625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1640379-1640539:1:exon

position:1640379:1
position: 1640379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640539:1
position: 1640539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1642873-1643044:1:exon

position:1642873:1
position: 1642873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643044:1
position: 1643044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1647834-1651229:1:exon

position:1647834:1
position: 1647834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ext1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ext1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-1
translation: MQAKKRYFILLSAGSCLALLFYFGGVQFRASRSHSRREEHSGRNGLHQPSPDHFWPRFPDALRPFFPWDQLENEDSSVHISPRQKRDANSSIYKGKKCRMESCFDFTLCKKNGFKVYVYPQQKGEKIAESYQNILAAIEGSRFYTSDPSQACLFVLSLDTLDRDQLSPQYVHNLRSKVQSLHLWNNGRNHLIFNLYSGTWPDYTEDVGFDIGQAMLAKASISTENFRPNFDVSIPLFSKDHPRTGGERGFLKFNTIPPLRKYMLVFKGKRYLTGIGSDTRNALYHVHNGEDVLLLTTCKHGKDWQKHKDSRCDRDNTEYEKYDYREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQAAVIGDERLLLQIPSTIRSIHQDKILALRQQTQFLWEAYFSSVEKIVLTTLEIIQDRIFKHISRNSLIWNKHPGGLFVLPRYSSYLGDFPYFYANLGLKPPSKFTAVIHAVTPLVSQSQPVLKLLVAAAKSQYCAQIIVLWNCDKPLPAKHRWPATAVPVIVIEGESKVMSSRFLPYENIITDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDNSKERWGYTSKWTNDYSMVLTGAAIYHKYYHYLYTHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPPIKVTQKKQYKETMMGQTSRASRWADPDHFAQRQSCMNTFASWFGYMPLIHSQMRLDPVLFKDQVSILRKKYRDIERL
SIO_010081: Ext1
subclass of: SO_0000673
so part of: Ext1
location: join(1360459..1361420,1611366..1611459,1612926..1613033,1617288..1617407,1625963..1626095,1627441..1627559,1629334..1629429,1634536..1634625,1640379..1640539,1642873..1643044,1647834..1648019)
location: region:1360459-1648019:1
so has part: feature:1360459-1361420:1:exon
so has part: feature:1611366-1611459:1:exon
so has part: feature:1612926-1613033:1:exon
so has part: feature:1617288-1617407:1:exon
so has part: feature:1625963-1626095:1:exon
so has part: feature:1627441-1627559:1:exon
so has part: feature:1629334-1629429:1:exon
so has part: feature:1634536-1634625:1:exon
so has part: feature:1640379-1640539:1:exon
so has part: feature:1642873-1643044:1:exon
so has part: feature:1647834-1648019:1:exon

XP_005360582.1
type: Protein
SIO_000068: ncbiprotein

position:1360459:1
position: 1360459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648019:1
position: 1648019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360459-1361420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1611366-1611459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1612926-1613033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617288-1617407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1625963-1626095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627441-1627559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1629334-1629429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1634536-1634625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640379-1640539:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642873-1643044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1647834-1648019:1:exon

Med30
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Med30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1900703..1917769)
location: region:1900703-1917769:-1
so has part: feature:1900703-1917769:-1:exon
subclass of: SO_0000010

101979028
type: Gene
SIO_000068: ncbigene

position:1900703:-1
position: 1900703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1917769:-1
position: 1917769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900703-1917769:-1:exon

Med30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Med30
product: mediator complex subunit 30
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005360526.2
SIO_010081: Med30
subclass of: SO_0000673
so part of: Med30
location: complement(join(1900703..1901021,1907786..1907890,1909366..1909524,1917505..1917769))
location: region:1900703-1917769:-1
so has part: feature:1917505-1917769:-1:exon
so has part: feature:1909366-1909524:-1:exon
so has part: feature:1907786-1907890:-1:exon
so has part: feature:1900703-1901021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1917505-1917769:-1:exon

position:1917505:-1
position: 1917505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1909366-1909524:-1:exon

position:1909366:-1
position: 1909366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909524:-1
position: 1909524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1907786-1907890:-1:exon

position:1907786:-1
position: 1907786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907890:-1
position: 1907890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1900703-1901021:-1:exon

position:1901021:-1
position: 1901021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Med30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Med30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 30
translation: MSTPPLAPAGMAPGPFGGPQAQQAAREVNTATLCRIGQETVQDIVYRTMEIFQLLRNMQLPNGVTYHTGTYQDRLTKLQDHLRQLSILFRKLRLVYDKCNENCGGMDPIPVEQLIPYVDEDGSKNDDRAGPPRFASEERREIAEVNKKLKQKNQQLKQIMDQLRNLIWDINAMLAMRN
SIO_010081: Med30
subclass of: SO_0000673
so part of: Med30
location: complement(join(1900926..1901021,1907786..1907890,1909366..1909524,1917505..1917681))
location: region:1900926-1917681:-1
so has part: feature:1917505-1917681:-1:exon
so has part: feature:1909366-1909524:-1:exon
so has part: feature:1907786-1907890:-1:exon
so has part: feature:1900926-1901021:-1:exon

XP_005360583.1
type: Protein
SIO_000068: ncbiprotein

position:1900926:-1
position: 1900926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1917681:-1
position: 1917681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1917505-1917681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1909366-1909524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1907786-1907890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1900926-1901021:-1:exon

Slc30a8
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc30a8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2187063..2220354)
location: region:2187063-2220354:-1
so has part: feature:2187063-2220354:-1:exon
subclass of: SO_0000010

101979497
type: Gene
SIO_000068: ncbigene

position:2187063:-1
position: 2187063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220354:-1
position: 2220354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2187063-2220354:-1:exon

Slc30a8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc30a8
product: solute carrier family 30 member 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360529.3
SIO_010081: Slc30a8
subclass of: SO_0000673
so part of: Slc30a8
location: complement(join(2187063..2187208,2188806..2188940,2190009..2190114,2192870..2193020,2196724..2196877,2201606..2201752,2210195..2210391,2220287..2220354))
location: region:2187063-2220354:-1
so has part: feature:2220287-2220354:-1:exon
so has part: feature:2210195-2210391:-1:exon
so has part: feature:2201606-2201752:-1:exon
so has part: feature:2196724-2196877:-1:exon
so has part: feature:2192870-2193020:-1:exon
so has part: feature:2190009-2190114:-1:exon
so has part: feature:2188806-2188940:-1:exon
so has part: feature:2187063-2187208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2220287-2220354:-1:exon

position:2220287:-1
position: 2220287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2210195-2210391:-1:exon

position:2210195:-1
position: 2210195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210391:-1
position: 2210391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2201606-2201752:-1:exon

position:2201606:-1
position: 2201606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2201752:-1
position: 2201752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2196724-2196877:-1:exon

position:2196724:-1
position: 2196724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2196877:-1
position: 2196877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2192870-2193020:-1:exon

position:2192870:-1
position: 2192870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2193020:-1
position: 2193020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2190009-2190114:-1:exon

position:2190009:-1
position: 2190009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2190114:-1
position: 2190114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2188806-2188940:-1:exon

position:2188806:-1
position: 2188806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2188940:-1
position: 2188940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2187063-2187208:-1:exon

position:2187208:-1
position: 2187208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc30a8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc30a8
product: solute carrier family 30 member 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360528.3
SIO_010081: Slc30a8
subclass of: SO_0000673
so part of: Slc30a8
location: complement(join(2187063..2187208,2188806..2188940,2190009..2190114,2192870..2193020,2196724..2196877,2201606..2201752,2210195..2210394,2220287..2220354))
location: region:2187063-2220354:-1
so has part: feature:2220287-2220354:-1:exon
so has part: feature:2210195-2210394:-1:exon
so has part: feature:2201606-2201752:-1:exon
so has part: feature:2196724-2196877:-1:exon
so has part: feature:2192870-2193020:-1:exon
so has part: feature:2190009-2190114:-1:exon
so has part: feature:2188806-2188940:-1:exon
so has part: feature:2187063-2187208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2220287-2220354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2210195-2210394:-1:exon

position:2210394:-1
position: 2210394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2201606-2201752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2196724-2196877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2192870-2193020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2190009-2190114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2188806-2188940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2187063-2187208:-1:exon

Slc30a8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc30a8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter 8 isoform X2
translation: MEFERTSLVNDQATKMYTFTLDRELRQKLVNEDGCPGDRPEQPEEEGIYHCHSNAKATENGSSKQVHAKRRLCVASAICFIFMVAEVVGGHLAGSLAVITDAAHLLIDLTSFLLSLFSLWLSSRPPSKRLTFGWYRAEILGALLSVLCIWLVTGVLVYLACERLLYPDYQIQASIMIIVSGCAVAANIVLTAILHQRHLGHNHKDAQANASVRAAFVHALGDVFQSISVLISALIIYFKPDYKIADPVCTFIFSILVLVSTIMILKDFSILLMEGVPKGLNYSSVKELILAVDGVVSLHNLHIWSLTGNQVIISVHVATAASQDSQSLQTRIARALHSCFDLHSLTIQIESAAAQDPSCLFCEEPQD
SIO_010081: Slc30a8
subclass of: SO_0000673
so part of: Slc30a8
location: complement(join(2187063..2187208,2188806..2188940,2190009..2190114,2192870..2193020,2196724..2196877,2201606..2201752,2210195..2210391,2220287..2220354))
location: region:2187063-2220354:-1
so has part: feature:2220287-2220354:-1:exon
so has part: feature:2210195-2210391:-1:exon
so has part: feature:2201606-2201752:-1:exon
so has part: feature:2196724-2196877:-1:exon
so has part: feature:2192870-2193020:-1:exon
so has part: feature:2190009-2190114:-1:exon
so has part: feature:2188806-2188940:-1:exon
so has part: feature:2187063-2187208:-1:exon

XP_005360586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2220287-2220354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2210195-2210391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2201606-2201752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2196724-2196877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2192870-2193020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2190009-2190114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2188806-2188940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2187063-2187208:-1:exon

Slc30a8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc30a8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter 8 isoform X1
translation: MEFERTSLVNDQATKMYTFTLDSRELRQKLVNEDGCPGDRPEQPEEEGIYHCHSNAKATENGSSKQVHAKRRLCVASAICFIFMVAEVVGGHLAGSLAVITDAAHLLIDLTSFLLSLFSLWLSSRPPSKRLTFGWYRAEILGALLSVLCIWLVTGVLVYLACERLLYPDYQIQASIMIIVSGCAVAANIVLTAILHQRHLGHNHKDAQANASVRAAFVHALGDVFQSISVLISALIIYFKPDYKIADPVCTFIFSILVLVSTIMILKDFSILLMEGVPKGLNYSSVKELILAVDGVVSLHNLHIWSLTGNQVIISVHVATAASQDSQSLQTRIARALHSCFDLHSLTIQIESAAAQDPSCLFCEEPQD
SIO_010081: Slc30a8
subclass of: SO_0000673
so part of: Slc30a8
location: complement(join(2187063..2187208,2188806..2188940,2190009..2190114,2192870..2193020,2196724..2196877,2201606..2201752,2210195..2210394,2220287..2220354))
location: region:2187063-2220354:-1
so has part: feature:2220287-2220354:-1:exon
so has part: feature:2210195-2210394:-1:exon
so has part: feature:2201606-2201752:-1:exon
so has part: feature:2196724-2196877:-1:exon
so has part: feature:2192870-2193020:-1:exon
so has part: feature:2190009-2190114:-1:exon
so has part: feature:2188806-2188940:-1:exon
so has part: feature:2187063-2187208:-1:exon

XP_005360585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2220287-2220354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2210195-2210394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2201606-2201752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2196724-2196877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2192870-2193020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2190009-2190114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2188806-2188940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2187063-2187208:-1:exon

Aard
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Aard
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2365666..2370558)
location: region:2365666-2370558:-1
so has part: feature:2365666-2370558:-1:exon
subclass of: SO_0000010

101979972
type: Gene
SIO_000068: ncbigene

position:2365666:-1
position: 2365666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2370558:-1
position: 2370558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365666-2370558:-1:exon

Aard
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Aard
product: alanine and arginine rich domain containing protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005360530.3
SIO_010081: Aard
subclass of: SO_0000673
so part of: Aard
location: complement(join(2365666..2366594,2370217..2370558))
location: region:2365666-2370558:-1
so has part: feature:2370217-2370558:-1:exon
so has part: feature:2365666-2366594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2370217-2370558:-1:exon

position:2370217:-1
position: 2370217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2365666-2366594:-1:exon

position:2366594:-1
position: 2366594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Aard
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Aard
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanine and arginine-rich domain-containing protein
translation: MGLGDYSHCRQRMSRGLHGVSGRAALWFPAFHSVHRTPCGTWRIEAQEQARASTPVLEHLRRQLERAFQRAAARGRTRRAREAVAAVAAAAAAAREERTRVRMECALARLRAELLELRFQNHQLARTLLDLNVKMQQLKKQQDRQRASKSQSPEDDAMNPECGNA
SIO_010081: Aard
subclass of: SO_0000673
so part of: Aard
location: complement(join(2366439..2366594,2370217..2370558))
location: region:2366439-2370558:-1
so has part: feature:2370217-2370558:-1:exon
so has part: feature:2366439-2366594:-1:exon

XP_005360587.1
type: Protein
SIO_000068: ncbiprotein

position:2366439:-1
position: 2366439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370217-2370558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2366439-2366594:-1:exon

Rad21
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rad21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2399097..2427237
location: region:2399097-2427237:1
so has part: feature:2399097-2427237:1:exon
subclass of: SO_0000010

101980263
type: Gene
SIO_000068: ncbigene

position:2399097:1
position: 2399097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2427237:1
position: 2427237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399097-2427237:1:exon

Rad21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rad21
product: RAD21 cohesin complex component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013351278.2
SIO_010081: Rad21
subclass of: SO_0000673
so part of: Rad21
location: join(2399097..2399294,2408720..2408894,2412640..2412769,2414322..2414421,2416434..2416540,2417333..2417539,2417972..2418097,2418427..2418549,2419962..2420185,2421376..2421550,2422066..2422214,2422986..2423135,2424809..2424892,2425597..2427237)
location: region:2399097-2427237:1
so has part: feature:2399097-2399294:1:exon
so has part: feature:2408720-2408894:1:exon
so has part: feature:2412640-2412769:1:exon
so has part: feature:2414322-2414421:1:exon
so has part: feature:2416434-2416540:1:exon
so has part: feature:2417333-2417539:1:exon
so has part: feature:2417972-2418097:1:exon
so has part: feature:2418427-2418549:1:exon
so has part: feature:2419962-2420185:1:exon
so has part: feature:2421376-2421550:1:exon
so has part: feature:2422066-2422214:1:exon
so has part: feature:2422986-2423135:1:exon
so has part: feature:2424809-2424892:1:exon
so has part: feature:2425597-2427237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2399097-2399294:1:exon

position:2399294:1
position: 2399294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2408720-2408894:1:exon

position:2408720:1
position: 2408720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408894:1
position: 2408894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2412640-2412769:1:exon

position:2412640:1
position: 2412640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412769:1
position: 2412769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2414322-2414421:1:exon

position:2414322:1
position: 2414322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414421:1
position: 2414421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2416434-2416540:1:exon

position:2416434:1
position: 2416434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416540:1
position: 2416540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2417333-2417539:1:exon

position:2417333:1
position: 2417333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2417539:1
position: 2417539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2417972-2418097:1:exon

position:2417972:1
position: 2417972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2418097:1
position: 2418097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2418427-2418549:1:exon

position:2418427:1
position: 2418427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2418549:1
position: 2418549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2419962-2420185:1:exon

position:2419962:1
position: 2419962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420185:1
position: 2420185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2421376-2421550:1:exon

position:2421376:1
position: 2421376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421550:1
position: 2421550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2422066-2422214:1:exon

position:2422066:1
position: 2422066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422214:1
position: 2422214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2422986-2423135:1:exon

position:2422986:1
position: 2422986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2423135:1
position: 2423135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2424809-2424892:1:exon

position:2424809:1
position: 2424809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424892:1
position: 2424892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2425597-2427237:1:exon

position:2425597:1
position: 2425597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rad21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rad21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-strand-break repair protein rad21 homolog
translation: MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLLLGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQPLPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDDDMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGGIFDDPPALSETGVMLPEQPAHDDMDEDDNVSMGGPDSPDSVDPVEPMPTMTDQTTLVPNEEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKKLMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKEFENPEVPREEQQQQQQQQQQQQREVIDEPILEEPSRLQESVMEASRTSIDESAMPPPPPQGVKRKAGQIDPEPVIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEEEEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII
SIO_010081: Rad21
subclass of: SO_0000673
so part of: Rad21
location: join(2408751..2408894,2412640..2412769,2414322..2414421,2416434..2416540,2417333..2417539,2417972..2418097,2418427..2418549,2419962..2420185,2421376..2421550,2422066..2422214,2422986..2423135,2424809..2424892,2425597..2425788)
location: region:2408751-2425788:1
so has part: feature:2408751-2408894:1:exon
so has part: feature:2412640-2412769:1:exon
so has part: feature:2414322-2414421:1:exon
so has part: feature:2416434-2416540:1:exon
so has part: feature:2417333-2417539:1:exon
so has part: feature:2417972-2418097:1:exon
so has part: feature:2418427-2418549:1:exon
so has part: feature:2419962-2420185:1:exon
so has part: feature:2421376-2421550:1:exon
so has part: feature:2422066-2422214:1:exon
so has part: feature:2422986-2423135:1:exon
so has part: feature:2424809-2424892:1:exon
so has part: feature:2425597-2425788:1:exon

XP_013206732.1
type: Protein
SIO_000068: ncbiprotein

position:2408751:1
position: 2408751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425788:1
position: 2425788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2408751-2408894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2412640-2412769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2414322-2414421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2416434-2416540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2417333-2417539:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2417972-2418097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2418427-2418549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2419962-2420185:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2421376-2421550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2422066-2422214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2422986-2423135:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2424809-2424892:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2425597-2425788:1:exon

Utp23
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Utp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2479952..2484993)
location: region:2479952-2484993:-1
so has part: feature:2479952-2484993:-1:exon
subclass of: SO_0000010

101980545
type: Gene
SIO_000068: ncbigene

position:2479952:-1
position: 2479952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2484993:-1
position: 2484993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2479952-2484993:-1:exon

Utp23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Utp23
product: UTP23, small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005360532.3
SIO_010081: Utp23
subclass of: SO_0000673
so part of: Utp23
location: complement(join(2479952..2480491,2481548..2481722,2484737..2484993))
location: region:2479952-2484993:-1
so has part: feature:2484737-2484993:-1:exon
so has part: feature:2481548-2481722:-1:exon
so has part: feature:2479952-2480491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2484737-2484993:-1:exon

position:2484737:-1
position: 2484737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2481548-2481722:-1:exon

position:2481548:-1
position: 2481548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2481722:-1
position: 2481722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2479952-2480491:-1:exon

position:2480491:-1
position: 2480491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Utp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Utp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rRNA-processing protein UTP23 homolog
translation: MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLRDQLPRYLMGETQLCTTRCVLKELETLGKELYGAKLIAQRCQVRNCRHVKSAVSGSECLLSMVEEGNPHHYFVATQDQDLSVKVKKTPGIPLMFIIQNTMVLDRPSPRTVAFVKAVESGQLVSVHEKQSIKQLKEEQGLVKSREPRRKRKKKVGGPNPLSCLKKKKKAQDPKSPASEKKKKRKRIRNRSTPKVLPEQQGVEG
SIO_010081: Utp23
subclass of: SO_0000673
so part of: Utp23
location: complement(join(2480111..2480491,2481548..2481722,2484737..2484924))
location: region:2480111-2484924:-1
so has part: feature:2484737-2484924:-1:exon
so has part: feature:2481548-2481722:-1:exon
so has part: feature:2480111-2480491:-1:exon

XP_005360589.1
type: Protein
SIO_000068: ncbiprotein

position:2480111:-1
position: 2480111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2484924:-1
position: 2484924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2484737-2484924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2481548-2481722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2480111-2480491:-1:exon

Eif3h
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Eif3h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2496443..2572161
location: region:2496443-2572161:1
so has part: feature:2496443-2572161:1:exon
subclass of: SO_0000010

101980815
type: Gene
SIO_000068: ncbigene

position:2496443:1
position: 2496443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2572161:1
position: 2572161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496443-2572161:1:exon

Eif3h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Eif3h
product: eukaryotic translation initiation factor 3 subunit H
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_005360533.3
SIO_010081: Eif3h
subclass of: SO_0000673
so part of: Eif3h
location: join(2496443..2496608,2507833..2507989,2560479..2560646,2562123..2562222,2563320..2563469,2568512..2568632,2569525..2569657,2571887..2572161)
location: region:2496443-2572161:1
so has part: feature:2496443-2496608:1:exon
so has part: feature:2507833-2507989:1:exon
so has part: feature:2560479-2560646:1:exon
so has part: feature:2562123-2562222:1:exon
so has part: feature:2563320-2563469:1:exon
so has part: feature:2568512-2568632:1:exon
so has part: feature:2569525-2569657:1:exon
so has part: feature:2571887-2572161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2496443-2496608:1:exon

position:2496608:1
position: 2496608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2507833-2507989:1:exon

position:2507833:1
position: 2507833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507989:1
position: 2507989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2560479-2560646:1:exon

position:2560479:1
position: 2560479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2560646:1
position: 2560646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2562123-2562222:1:exon

position:2562123:1
position: 2562123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2562222:1
position: 2562222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2563320-2563469:1:exon

position:2563320:1
position: 2563320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563469:1
position: 2563469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2568512-2568632:1:exon

position:2568512:1
position: 2568512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2568632:1
position: 2568632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2569525-2569657:1:exon

position:2569525:1
position: 2569525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2569657:1
position: 2569657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2571887-2572161:1:exon

position:2571887:1
position: 2571887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Eif3h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Eif3h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit H
translation: MASRKEGTGSTATSSSSAGGAVGKGKGKGGSGDSAVKQVQIDGLVILKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDAEFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKASITFEHMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMDRVDEMSQDIIKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPHQAPPRMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQEYNN
SIO_010081: Eif3h
subclass of: SO_0000673
so part of: Eif3h
location: join(2496477..2496608,2507833..2507989,2560479..2560646,2562123..2562222,2563320..2563469,2568512..2568632,2569525..2569657,2571887..2571984)
location: region:2496477-2571984:1
so has part: feature:2496477-2496608:1:exon
so has part: feature:2507833-2507989:1:exon
so has part: feature:2560479-2560646:1:exon
so has part: feature:2562123-2562222:1:exon
so has part: feature:2563320-2563469:1:exon
so has part: feature:2568512-2568632:1:exon
so has part: feature:2569525-2569657:1:exon
so has part: feature:2571887-2571984:1:exon

XP_005360590.1
type: Protein
SIO_000068: ncbiprotein

position:2496477:1
position: 2496477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2571984:1
position: 2571984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496477-2496608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2507833-2507989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2560479-2560646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2562123-2562222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2563320-2563469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2568512-2568632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569525-2569657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571887-2571984:1:exon

LOC106144145
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2550481..2550874)
location: region:2550481-2550874:-1
so has part: feature:2550481-2550874:-1:exon

106144145
type: Gene
SIO_000068: ncbigene

position:2550481:-1
position: 2550481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2550874:-1
position: 2550874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550481-2550874:-1:exon

LOC106144145
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144145
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106144145
subclass of: SO_0000673
so part of: LOC106144145
location: complement(2550481..2550874)
location: region:2550481-2550874:-1
so has part: feature:2550481-2550874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2550481-2550874:-1:exon

LOC101981107
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2929461..2930291)
location: region:2929461-2930291:-1
so has part: feature:2929461-2930291:-1:exon

101981107
type: Gene
SIO_000068: ncbigene

position:2929461:-1
position: 2929461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930291:-1
position: 2930291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2929461-2930291:-1:exon

LOC101981107
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981107
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981107
subclass of: SO_0000673
so part of: LOC101981107
location: complement(2929461..2930291)
location: region:2929461-2930291:-1
so has part: feature:2929461-2930291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2929461-2930291:-1:exon

LOC113457634
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457634
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3124670..3124776
location: region:3124670-3124776:1
so has part: feature:3124670-3124776:1:exon
subclass of: SO_0000623

113457634
type: Gene
SIO_000068: ncbigene

position:3124670:1
position: 3124670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3124776:1
position: 3124776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3124670-3124776:1:exon

LOC113457634
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457634
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378163.1
SIO_010081: LOC113457634
subclass of: SO_0000673
so part of: LOC113457634
location: 3124670..3124776
location: region:3124670-3124776:1
so has part: feature:3124670-3124776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3124670-3124776:1:exon

LOC113457628
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457628
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3200498..3200603)
location: region:3200498-3200603:-1
so has part: feature:3200498-3200603:-1:exon
subclass of: SO_0000623

113457628
type: Gene
SIO_000068: ncbigene

position:3200498:-1
position: 3200498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3200603:-1
position: 3200603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3200498-3200603:-1:exon

LOC113457628
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457628
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378158.1
SIO_010081: LOC113457628
subclass of: SO_0000673
so part of: LOC113457628
location: complement(3200498..3200603)
location: region:3200498-3200603:-1
so has part: feature:3200498-3200603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3200498-3200603:-1:exon

LOC101981394
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3291082..3291529)
location: region:3291082-3291529:-1
so has part: feature:3291082-3291529:-1:exon

101981394
type: Gene
SIO_000068: ncbigene

position:3291082:-1
position: 3291082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3291529:-1
position: 3291529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291082-3291529:-1:exon

LOC101981394
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981394
subclass of: SO_0000673
so part of: LOC101981394
location: complement(3291082..3291529)
location: region:3291082-3291529:-1
so has part: feature:3291082-3291529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3291082-3291529:-1:exon

Trps1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Trps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3377544..3615430
location: region:3377544-3615430:1
so has part: feature:3377544-3615430:1:exon
subclass of: SO_0000010

101981658
type: Gene
SIO_000068: ncbigene

position:3377544:1
position: 3377544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3615430:1
position: 3615430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3377544-3615430:1:exon

Trps1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Trps1
product: transcriptional repressor GATA binding 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026785897.1
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3377544..3378023,3421293..3422221,3437275..3438404,3448217..3448820,3504121..3504153,3605715..3605837,3608753..3615430)
location: region:3377544-3615430:1
so has part: feature:3377544-3378023:1:exon
so has part: feature:3421293-3422221:1:exon
so has part: feature:3437275-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3504121-3504153:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3615430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3377544-3378023:1:exon

position:3378023:1
position: 3378023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3421293-3422221:1:exon

position:3421293:1
position: 3421293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3422221:1
position: 3422221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3437275-3438404:1:exon

position:3437275:1
position: 3437275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438404:1
position: 3438404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3448217-3448820:1:exon

position:3448217:1
position: 3448217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3448820:1
position: 3448820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3504121-3504153:1:exon

position:3504121:1
position: 3504121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3504153:1
position: 3504153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3605715-3605837:1:exon

position:3605715:1
position: 3605715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3605837:1
position: 3605837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3608753-3615430:1:exon

position:3608753:1
position: 3608753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trps1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Trps1
product: transcriptional repressor GATA binding 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026785896.1
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3378429..3378669,3421293..3422221,3437275..3438404,3448217..3448820,3504121..3504153,3605715..3605837,3608753..3615430)
location: region:3378429-3615430:1
so has part: feature:3378429-3378669:1:exon
so has part: feature:3421293-3422221:1:exon
so has part: feature:3437275-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3504121-3504153:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3615430:1:exon

position:3378429:1
position: 3378429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3378429-3378669:1:exon

position:3378669:1
position: 3378669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3421293-3422221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437275-3438404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3448217-3448820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3504121-3504153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3605715-3605837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3608753-3615430:1:exon

Trps1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Trps1
product: transcriptional repressor GATA binding 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026785898.1
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3378429..3378669,3421293..3422221,3437275..3438404,3448217..3448820,3605715..3605837,3608753..3615430)
location: region:3378429-3615430:1
so has part: feature:3378429-3378669:1:exon
so has part: feature:3421293-3422221:1:exon
so has part: feature:3437275-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3615430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3378429-3378669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421293-3422221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437275-3438404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3448217-3448820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3605715-3605837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3608753-3615430:1:exon

Trps1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Trps1
product: transcriptional repressor GATA binding 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026785899.1
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3378431..3378669,3421293..3422221,3437275..3437626,3438227..3438404,3448217..3448820,3605715..3605837,3608753..3615430)
location: region:3378431-3615430:1
so has part: feature:3378431-3378669:1:exon
so has part: feature:3421293-3422221:1:exon
so has part: feature:3437275-3437626:1:exon
so has part: feature:3438227-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3615430:1:exon

position:3378431:1
position: 3378431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3378431-3378669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421293-3422221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437275-3437626:1:exon

position:3437626:1
position: 3437626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3438227-3438404:1:exon

position:3438227:1
position: 3438227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3448217-3448820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3605715-3605837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3608753-3615430:1:exon

Trps1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Trps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger transcription factor Trps1 isoform X1
translation: MQSNMVRKKNPPLRNVASEGEGHTPEPIATESKVSAKDKEFSADQMSENTDHSDAAELNTKEESSAHGQDPSPSSKKDLQISGLSEKAGFNYDSPSKGGNLASFPHDEVTDRNMLAFSSPAAGGVCEPLKSPQRAEADDPQDMACTPSGDSLETKEEHKMSPKATEDTGPVQSSQANCQGLSPISVASKNPQVPSDGGVRLSKPKTDLLVNDNPDPAPLSPELQDFKCNICGYGYYGNDPTDLIKHFRKYHLGLHNRTRQDAELDSKILALHNMVQFSHSKDFQKVNRSVLPGVLQDISPSRPALLNGTYDVQVTSGGTFIGIGRKTPDCQGNTKYFRCKFCNFTYMGNSSTELEQHFLQTHPNKIKVSLPSSEGAKPSEKNSNKSIPALRASDSGDFGKWQDKITVKAGDDTPVGYSVPIKSLDSSRQNGTEATSYYWCKFCSFSCESSSSLKLLEHYGKQHGALLSGGLNPELNDKLPRGSVINQNDLAKSVEGEPLTKPEKGLSGAKKKDFPSKGAEDNMVTSYNCQFCDFRYSKSHGPDVIVVGPLLRHYQQLHNIHKCTIKHCPFCPRGLCSPEKHLGEITYPFACRKSNCSHCALLLLHLSPGVAGSSRVKHQCHQCSFFTPDVDVLLFHYETMHESPASDVKQEANHLLGSDGQQAVKESQEHSCTKCDFITQVEEEISRHYRRAHSCYKCRQCSFTAADTQSLLEHFNTVHCQEQEITTANGEEDGHAIPTIKEEPKIDLKVYSLLNPDSKMGETVPESIVKREKLDDKEGLKDKVWTESSNDDLRGMSWRGADILRGSPSYTQASLGLLTPVSSSQEQTKTLRDSPNVEAAHLARPMYGLAVDTKGFLQGAPAGGEKSASLTQQYPASGESKTKDESQSLLRAVAISGTPNRRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQIIRRRTRKRLNPEALQAEQLNKQQRGSGEEQVNGSPLERRSEDHLNESHQREIPLPSLSKYEAQGSLTKSHSAQQPVLVSQTLDIHKRMQPLHIQIKSPQESTGDPGNSSSVSEGKGSSERGSPIEKYMRPAKHPNYSPPGSPIEKYQYPLFGLPFVHNDFQSEADWLRFWSKYKLSVPGNPHYLSHVPGLPNPCQNYVPYPTFNLPPHFSAVGSDNDIPLDLAIKHSRPGPTANGASKEKTKAPPNVKSEGPLNVVKTEKVDRSTQDELSTKCVHCGIVFLDEVMYALHMSCHGDSGPFQCSICQHLCTDKYDFTTHIQRGLHRNNAQAEKNGKPKE
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3378660..3378669,3421293..3422221,3437275..3438404,3448217..3448820,3504121..3504153,3605715..3605837,3608753..3609814)
location: region:3378660-3609814:1
so has part: feature:3378660-3378669:1:exon
so has part: feature:3421293-3422221:1:exon
so has part: feature:3437275-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3504121-3504153:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3609814:1:exon

XP_026641697.1
type: Protein
SIO_000068: ncbiprotein

position:3378660:1
position: 3378660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3609814:1
position: 3609814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3378660-3378669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421293-3422221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437275-3438404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3448217-3448820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3504121-3504153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3605715-3605837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3608753-3609814:1:exon

Trps1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Trps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger transcription factor Trps1 isoform X3
translation: MQSNMVRKKNPPLRNVASEGEGHTPEPIATESKVSAKDKEFSADQMSENTDHSDAAELNTKEESSAHGQDPSPSSKKDLQISGLSEKAGFNYDSPSKGGNLASFPHDEVTDRNMLAFSSPAAGGVCEPLKSPQRAEADDPQDMACTPSGDSLETKEEHKMSPKATEDTGPVQSSQANCQGLSPISVASKNPQVPSDGGVRLSKPKTDLLVNDNPDPAPLSPELQDFKCNICGYGYYGNDPTDLIKHFRKYHLGLHNRTRQDAELDSKILALHNMVQFSHSKDFQKVNRSVLPGVLQDISPSRPALLNGTYDVQVTSGGTFIGIGRKTPDCQGNTKYFRCKFCNFTYMGNSSTELEQHFLQTHPNKIKVSLPSSEGAKPSEKNSNKSIPALRASDSGDFGKWQDKITVKAGDDTPVGYSVPIKSLDSSRQNGTEATSYYWCKFCSFSCESSSSLKLLEHYGKQHGALLSGGLNPELNDKLPRGSVINQNDLAKSVEGEPLTKPEKGLSGAKKKDFPSKGAEDNMVTSYNCQFCDFRYSKSHGPDVIVVGPLLRHYQQLHNIHKCTIKHCPFCPRGLCSPEKHLGEITYPFACRKSNCSHCALLLLHLSPGVAGSSRVKHQCHQCSFFTPDVDVLLFHYETMHESPASDVKQEANHLLGSDGQQAVKESQEHSCTKCDFITQVEEEISRHYRRAHSCYKCRQCSFTAADTQSLLEHFNTVHCQEQEITTANGEEDGHAIPTIKEEPKIDLKVYSLLNPDSKMGETVPESIVKREKLDDKEGLKDKVWTESSNDDLRGMSWRGADILRGSPSYTQASLGLLTPVSSSQEQTKTLRDSPNVEAAHLARPMYGLAVDTKGFLQGAPAGGEKSASLTQQYPASGESKTKDESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQIIRRRTRKRLNPEALQAEQLNKQQRGSGEEQVNGSPLERRSEDHLNESHQREIPLPSLSKYEAQGSLTKSHSAQQPVLVSQTLDIHKRMQPLHIQIKSPQESTGDPGNSSSVSEGKGSSERGSPIEKYMRPAKHPNYSPPGSPIEKYQYPLFGLPFVHNDFQSEADWLRFWSKYKLSVPGNPHYLSHVPGLPNPCQNYVPYPTFNLPPHFSAVGSDNDIPLDLAIKHSRPGPTANGASKEKTKAPPNVKSEGPLNVVKTEKVDRSTQDELSTKCVHCGIVFLDEVMYALHMSCHGDSGPFQCSICQHLCTDKYDFTTHIQRGLHRNNAQAEKNGKPKE
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3378660..3378669,3421293..3422221,3437275..3438404,3448217..3448820,3605715..3605837,3608753..3609814)
location: region:3378660-3609814:1
so has part: feature:3378660-3378669:1:exon
so has part: feature:3421293-3422221:1:exon
so has part: feature:3437275-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3609814:1:exon

XP_026641699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3378660-3378669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421293-3422221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437275-3438404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3448217-3448820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3605715-3605837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3608753-3609814:1:exon

Trps1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Trps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger transcription factor Trps1 isoform X4
translation: MQSNMVRKKNPPLRNVASEGEGHTPEPIATESKVSAKDKEFSADQMSENTDHSDAAELNTKEESSAHGQDPSPSSKKDLQISGLSEKAGFNYDSPSKGGNLASFPHDEVTDRNMLAFSSPAAGGVCEPLKSPQRAEADDPQDMACTPSGDSLETKEEHKMSPKATEDTGPVQSSQANCQGLSPISVASKNPQVPSDGGVRLSKPKTDLLVNDNPDPAPLSPELQDFKCNICGYGYYGNDPTDLIKHFRKYHLGLHNRTRQDAELDSKILALHNMVQFSHSKDFQKVNRSVLPGVLQDISPSRPALLNGTYDVQVTSGGTFIGIGRKTPDCQGNTKYFRCKFCNFTYMGNSSTELEQHFLQTHPNKIKVSLPSSEGAKPSEKNSNKSIPALRASDSGDFGKWQDKITVKAGDDTPVGYSVPIKSLDSSRQNDVLLFHYETMHESPASDVKQEANHLLGSDGQQAVKESQEHSCTKCDFITQVEEEISRHYRRAHSCYKCRQCSFTAADTQSLLEHFNTVHCQEQEITTANGEEDGHAIPTIKEEPKIDLKVYSLLNPDSKMGETVPESIVKREKLDDKEGLKDKVWTESSNDDLRGMSWRGADILRGSPSYTQASLGLLTPVSSSQEQTKTLRDSPNVEAAHLARPMYGLAVDTKGFLQGAPAGGEKSASLTQQYPASGESKTKDESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQIIRRRTRKRLNPEALQAEQLNKQQRGSGEEQVNGSPLERRSEDHLNESHQREIPLPSLSKYEAQGSLTKSHSAQQPVLVSQTLDIHKRMQPLHIQIKSPQESTGDPGNSSSVSEGKGSSERGSPIEKYMRPAKHPNYSPPGSPIEKYQYPLFGLPFVHNDFQSEADWLRFWSKYKLSVPGNPHYLSHVPGLPNPCQNYVPYPTFNLPPHFSAVGSDNDIPLDLAIKHSRPGPTANGASKEKTKAPPNVKSEGPLNVVKTEKVDRSTQDELSTKCVHCGIVFLDEVMYALHMSCHGDSGPFQCSICQHLCTDKYDFTTHIQRGLHRNNAQAEKNGKPKE
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3378660..3378669,3421293..3422221,3437275..3437626,3438227..3438404,3448217..3448820,3605715..3605837,3608753..3609814)
location: region:3378660-3609814:1
so has part: feature:3378660-3378669:1:exon
so has part: feature:3421293-3422221:1:exon
so has part: feature:3437275-3437626:1:exon
so has part: feature:3438227-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3609814:1:exon

XP_026641700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3378660-3378669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421293-3422221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437275-3437626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3438227-3438404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448217-3448820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3605715-3605837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3608753-3609814:1:exon

Trps1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Trps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger transcription factor Trps1 isoform X2
translation: MVRKKNPPLRNVASEGEGHTPEPIATESKVSAKDKEFSADQMSENTDHSDAAELNTKEESSAHGQDPSPSSKKDLQISGLSEKAGFNYDSPSKGGNLASFPHDEVTDRNMLAFSSPAAGGVCEPLKSPQRAEADDPQDMACTPSGDSLETKEEHKMSPKATEDTGPVQSSQANCQGLSPISVASKNPQVPSDGGVRLSKPKTDLLVNDNPDPAPLSPELQDFKCNICGYGYYGNDPTDLIKHFRKYHLGLHNRTRQDAELDSKILALHNMVQFSHSKDFQKVNRSVLPGVLQDISPSRPALLNGTYDVQVTSGGTFIGIGRKTPDCQGNTKYFRCKFCNFTYMGNSSTELEQHFLQTHPNKIKVSLPSSEGAKPSEKNSNKSIPALRASDSGDFGKWQDKITVKAGDDTPVGYSVPIKSLDSSRQNGTEATSYYWCKFCSFSCESSSSLKLLEHYGKQHGALLSGGLNPELNDKLPRGSVINQNDLAKSVEGEPLTKPEKGLSGAKKKDFPSKGAEDNMVTSYNCQFCDFRYSKSHGPDVIVVGPLLRHYQQLHNIHKCTIKHCPFCPRGLCSPEKHLGEITYPFACRKSNCSHCALLLLHLSPGVAGSSRVKHQCHQCSFFTPDVDVLLFHYETMHESPASDVKQEANHLLGSDGQQAVKESQEHSCTKCDFITQVEEEISRHYRRAHSCYKCRQCSFTAADTQSLLEHFNTVHCQEQEITTANGEEDGHAIPTIKEEPKIDLKVYSLLNPDSKMGETVPESIVKREKLDDKEGLKDKVWTESSNDDLRGMSWRGADILRGSPSYTQASLGLLTPVSSSQEQTKTLRDSPNVEAAHLARPMYGLAVDTKGFLQGAPAGGEKSASLTQQYPASGESKTKDESQSLLRAVAISGTPNRRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQIIRRRTRKRLNPEALQAEQLNKQQRGSGEEQVNGSPLERRSEDHLNESHQREIPLPSLSKYEAQGSLTKSHSAQQPVLVSQTLDIHKRMQPLHIQIKSPQESTGDPGNSSSVSEGKGSSERGSPIEKYMRPAKHPNYSPPGSPIEKYQYPLFGLPFVHNDFQSEADWLRFWSKYKLSVPGNPHYLSHVPGLPNPCQNYVPYPTFNLPPHFSAVGSDNDIPLDLAIKHSRPGPTANGASKEKTKAPPNVKSEGPLNVVKTEKVDRSTQDELSTKCVHCGIVFLDEVMYALHMSCHGDSGPFQCSICQHLCTDKYDFTTHIQRGLHRNNAQAEKNGKPKE
SIO_010081: Trps1
subclass of: SO_0000673
so part of: Trps1
location: join(3421295..3422221,3437275..3438404,3448217..3448820,3504121..3504153,3605715..3605837,3608753..3609814)
location: region:3421295-3609814:1
so has part: feature:3421295-3422221:1:exon
so has part: feature:3437275-3438404:1:exon
so has part: feature:3448217-3448820:1:exon
so has part: feature:3504121-3504153:1:exon
so has part: feature:3605715-3605837:1:exon
so has part: feature:3608753-3609814:1:exon

XP_026641698.1
type: Protein
SIO_000068: ncbiprotein

position:3421295:1
position: 3421295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3421295-3422221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437275-3438404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3448217-3448820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3504121-3504153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3605715-3605837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3608753-3609814:1:exon

LOC113457625
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457625
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3757489..3757673
location: region:3757489-3757673:1
so has part: feature:3757489-3757673:1:exon
subclass of: SO_0000623

113457625
type: Gene
SIO_000068: ncbigene

position:3757489:1
position: 3757489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757673:1
position: 3757673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3757489-3757673:1:exon

LOC113457625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457625
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378155.1
SIO_010081: LOC113457625
subclass of: SO_0000673
so part of: LOC113457625
location: 3757489..3757673
location: region:3757489-3757673:1
so has part: feature:3757489-3757673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3757489-3757673:1:exon

LOC113457627
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457627
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4006014..4006121
location: region:4006014-4006121:1
so has part: feature:4006014-4006121:1:exon
subclass of: SO_0000623

113457627
type: Gene
SIO_000068: ncbigene

position:4006014:1
position: 4006014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4006121:1
position: 4006121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4006014-4006121:1:exon

LOC113457627
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457627
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003378157.1
SIO_010081: LOC113457627
subclass of: SO_0000673
so part of: LOC113457627
location: 4006014..4006121
location: region:4006014-4006121:1
so has part: feature:4006014-4006121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4006014-4006121:1:exon

LOC101982129
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101982129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4041550..4042392)
location: region:4041550-4042392:-1
so has part: feature:4041550-4042392:-1:exon
subclass of: SO_0000010

101982129
type: Gene
SIO_000068: ncbigene

position:4041550:-1
position: 4041550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4042392:-1
position: 4042392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041550-4042392:-1:exon

LOC101982129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101982129
product: 40S ribosomal protein S4, X isoform-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360537.2
SIO_010081: LOC101982129
subclass of: SO_0000673
so part of: LOC101982129
location: complement(4041550..4042392)
location: region:4041550-4042392:-1
so has part: feature:4041550-4042392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4041550-4042392:-1:exon

LOC101982129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101982129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, X isoform-like
translation: MARGPKKHLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLREYLSLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGLFAVHRITPEEAKYKLCKVRKIFVGTKGIPQLVTHDARTIRYPDPLIKVNYTIQIDLDTGKIIDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIHLTIAEERDKRLAAKQSSG
SIO_010081: LOC101982129
subclass of: SO_0000673
so part of: LOC101982129
location: complement(4041573..4042364)
location: region:4041573-4042364:-1
so has part: feature:4041573-4042364:-1:exon

XP_005360594.1
type: Protein
SIO_000068: ncbiprotein

position:4041573:-1
position: 4041573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4042364:-1
position: 4042364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041573-4042364:-1:exon

LOC106144143
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4351341..4351991
location: region:4351341-4351991:1
so has part: feature:4351341-4351991:1:exon

106144143
type: Gene
SIO_000068: ncbigene

position:4351341:1
position: 4351341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4351991:1
position: 4351991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351341-4351991:1:exon

LOC106144143
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144143
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC106144143
subclass of: SO_0000673
so part of: LOC106144143
location: 4351341..4351991
location: region:4351341-4351991:1
so has part: feature:4351341-4351991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4351341-4351991:1:exon

LOC113457618
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4628749..4658611)
location: region:4628749-4658611:-1
so has part: feature:4628749-4658611:-1:exon
subclass of: SO_0000011

113457618
type: Gene
SIO_000068: ncbigene

position:4628749:-1
position: 4628749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658611:-1
position: 4658611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4628749-4658611:-1:exon

LOC113457618
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457618
product: uncharacterized LOC113457618
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_003378153.1
SIO_010081: LOC113457618
subclass of: SO_0000673
so part of: LOC113457618
location: complement(join(4628749..4629153,4634834..4634924,4652877..4652984,4655330..4656041,4658530..4658611))
location: region:4628749-4658611:-1
so has part: feature:4658530-4658611:-1:exon
so has part: feature:4655330-4656041:-1:exon
so has part: feature:4652877-4652984:-1:exon
so has part: feature:4634834-4634924:-1:exon
so has part: feature:4628749-4629153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4658530-4658611:-1:exon

position:4658530:-1
position: 4658530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4655330-4656041:-1:exon

position:4655330:-1
position: 4655330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656041:-1
position: 4656041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4652877-4652984:-1:exon

position:4652877:-1
position: 4652877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4652984:-1
position: 4652984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4634834-4634924:-1:exon

position:4634834:-1
position: 4634834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4634924:-1
position: 4634924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4628749-4629153:-1:exon

position:4629153:-1
position: 4629153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Csmd3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Csmd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4659402..5612391
location: region:4659402-5612391:1
so has part: feature:4659402-5612391:1:exon
subclass of: SO_0000010

101982411
type: Gene
SIO_000068: ncbigene

position:4659402:1
position: 4659402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5612391:1
position: 5612391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4659402-5612391:1:exon

Csmd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Csmd3
product: CUB and Sushi multiple domains 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026785886.1
SIO_010081: Csmd3
subclass of: SO_0000673
so part of: Csmd3
location: join(4659402..4659963,4750593..4750815,4788303..4788415,4867168..4867362,4914601..4914808,4969560..4969672,5008565..5008873,5030264..5030341,5036672..5036759,5057658..5057782,5120006..5120127,5141368..5141471,5149365..5149477,5251906..5252088,5254256..5254582,5257577..5257771,5275581..5275719,5279391..5279578,5281456..5281644,5286106..5286222,5290670..5290885,5292967..5293155,5329239..5329408,5337667..5337823,5351637..5351828,5355961..5356087,5357647..5357849,5373313..5373504,5381115..5381253,5384179..5384366,5391410..5391604,5412364..5412480,5474657..5474770,5475240..5475335,5476851..5477054,5489725..5489849,5498212..5498308,5500708..5500812,5519869..5519987,5520983..5521052,5523485..5523601,5525008..5525217,5527467..5527655,5528301..5528478,5529321..5529466,5541434..5541514,5542077..5542190,5547026..5547214,5547574..5547720,5548772..5548960,5558220..5558405,5558965..5559159,5560880..5561053,5562946..5563119,5567072..5567245,5568351..5568536,5569273..5569446,5572012..5572194,5574040..5574216,5578650..5578829,5580482..5580655,5585383..5585556,5587669..5587742,5594299..5594410,5596680..5596859,5599331..5599396,5602842..5603000,5604859..5604971,5607675..5607762,5609095..5609230,5610459..5612391)
location: region:4659402-5612391:1
so has part: feature:4659402-4659963:1:exon
so has part: feature:4750593-4750815:1:exon
so has part: feature:4788303-4788415:1:exon
so has part: feature:4867168-4867362:1:exon
so has part: feature:4914601-4914808:1:exon
so has part: feature:4969560-4969672:1:exon
so has part: feature:5008565-5008873:1:exon
so has part: feature:5030264-5030341:1:exon
so has part: feature:5036672-5036759:1:exon
so has part: feature:5057658-5057782:1:exon
so has part: feature:5120006-5120127:1:exon
so has part: feature:5141368-5141471:1:exon
so has part: feature:5149365-5149477:1:exon
so has part: feature:5251906-5252088:1:exon
so has part: feature:5254256-5254582:1:exon
so has part: feature:5257577-5257771:1:exon
so has part: feature:5275581-5275719:1:exon
so has part: feature:5279391-5279578:1:exon
so has part: feature:5281456-5281644:1:exon
so has part: feature:5286106-5286222:1:exon
so has part: feature:5290670-5290885:1:exon
so has part: feature:5292967-5293155:1:exon
so has part: feature:5329239-5329408:1:exon
so has part: feature:5337667-5337823:1:exon
so has part: feature:5351637-5351828:1:exon
so has part: feature:5355961-5356087:1:exon
so has part: feature:5357647-5357849:1:exon
so has part: feature:5373313-5373504:1:exon
so has part: feature:5381115-5381253:1:exon
so has part: feature:5384179-5384366:1:exon
so has part: feature:5391410-5391604:1:exon
so has part: feature:5412364-5412480:1:exon
so has part: feature:5474657-5474770:1:exon
so has part: feature:5475240-5475335:1:exon
so has part: feature:5476851-5477054:1:exon
so has part: feature:5489725-5489849:1:exon
so has part: feature:5498212-5498308:1:exon
so has part: feature:5500708-5500812:1:exon
so has part: feature:5519869-5519987:1:exon
so has part: feature:5520983-5521052:1:exon
so has part: feature:5523485-5523601:1:exon
so has part: feature:5525008-5525217:1:exon
so has part: feature:5527467-5527655:1:exon
so has part: feature:5528301-5528478:1:exon
so has part: feature:5529321-5529466:1:exon
so has part: feature:5541434-5541514:1:exon
so has part: feature:5542077-5542190:1:exon
so has part: feature:5547026-5547214:1:exon
so has part: feature:5547574-5547720:1:exon
so has part: feature:5548772-5548960:1:exon
so has part: feature:5558220-5558405:1:exon
so has part: feature:5558965-5559159:1:exon
so has part: feature:5560880-5561053:1:exon
so has part: feature:5562946-5563119:1:exon
so has part: feature:5567072-5567245:1:exon
so has part: feature:5568351-5568536:1:exon
so has part: feature:5569273-5569446:1:exon
so has part: feature:5572012-5572194:1:exon
so has part: feature:5574040-5574216:1:exon
so has part: feature:5578650-5578829:1:exon
so has part: feature:5580482-5580655:1:exon
so has part: feature:5585383-5585556:1:exon
so has part: feature:5587669-5587742:1:exon
so has part: feature:5594299-5594410:1:exon
so has part: feature:5596680-5596859:1:exon
so has part: feature:5599331-5599396:1:exon
so has part: feature:5602842-5603000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4659402-4659963:1:exon

position:4659963:1
position: 4659963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4750593-4750815:1:exon

position:4750593:1
position: 4750593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4750815:1
position: 4750815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4788303-4788415:1:exon

position:4788303:1
position: 4788303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4788415:1
position: 4788415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4867168-4867362:1:exon

position:4867168:1
position: 4867168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4867362:1
position: 4867362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4914601-4914808:1:exon

position:4914601:1
position: 4914601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4914808:1
position: 4914808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4969560-4969672:1:exon

position:4969560:1
position: 4969560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4969672:1
position: 4969672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5008565-5008873:1:exon

position:5008565:1
position: 5008565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5008873:1
position: 5008873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5030264-5030341:1:exon

position:5030264:1
position: 5030264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5030341:1
position: 5030341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5036672-5036759:1:exon

position:5036672:1
position: 5036672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5036759:1
position: 5036759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5057658-5057782:1:exon

position:5057658:1
position: 5057658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5057782:1
position: 5057782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5120006-5120127:1:exon

position:5120006:1
position: 5120006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5120127:1
position: 5120127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5141368-5141471:1:exon

position:5141368:1
position: 5141368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5141471:1
position: 5141471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5149365-5149477:1:exon

position:5149365:1
position: 5149365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5149477:1
position: 5149477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5251906-5252088:1:exon

position:5251906:1
position: 5251906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5252088:1
position: 5252088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5254256-5254582:1:exon

position:5254256:1
position: 5254256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5254582:1
position: 5254582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5257577-5257771:1:exon

position:5257577:1
position: 5257577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5257771:1
position: 5257771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5275581-5275719:1:exon

position:5275581:1
position: 5275581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5275719:1
position: 5275719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5279391-5279578:1:exon

position:5279391:1
position: 5279391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5279578:1
position: 5279578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5281456-5281644:1:exon

position:5281456:1
position: 5281456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5281644:1
position: 5281644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5286106-5286222:1:exon

position:5286106:1
position: 5286106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5286222:1
position: 5286222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5290670-5290885:1:exon

position:5290670:1
position: 5290670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5290885:1
position: 5290885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5292967-5293155:1:exon

position:5292967:1
position: 5292967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5293155:1
position: 5293155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5329239-5329408:1:exon

position:5329239:1
position: 5329239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5329408:1
position: 5329408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5337667-5337823:1:exon

position:5337667:1
position: 5337667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5337823:1
position: 5337823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5351637-5351828:1:exon

position:5351637:1
position: 5351637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351828:1
position: 5351828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5355961-5356087:1:exon

position:5355961:1
position: 5355961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5356087:1
position: 5356087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5357647-5357849:1:exon

position:5357647:1
position: 5357647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5357849:1
position: 5357849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5373313-5373504:1:exon

position:5373313:1
position: 5373313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5373504:1
position: 5373504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5381115-5381253:1:exon

position:5381115:1
position: 5381115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5381253:1
position: 5381253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5384179-5384366:1:exon

position:5384179:1
position: 5384179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5384366:1
position: 5384366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5391410-5391604:1:exon

position:5391410:1
position: 5391410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5391604:1
position: 5391604
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:5412364-5412480:1:exon

position:5412364:1
position: 5412364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5412480:1
position: 5412480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5474657-5474770:1:exon

position:5474657:1
position: 5474657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5474770:1
position: 5474770
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:5475240-5475335:1:exon

position:5475240:1
position: 5475240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5475335:1
position: 5475335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5476851-5477054:1:exon

position:5476851:1
position: 5476851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5477054:1
position: 5477054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:5489725-5489849:1:exon

position:5489725:1
position: 5489725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5489849:1
position: 5489849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:5498212-5498308:1:exon

position:5498212:1
position: 5498212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5498308:1
position: 5498308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:5500708-5500812:1:exon

position:5500708:1
position: 5500708
reference: sequence
type: ForwardStrandPosition
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position:5500812:1
position: 5500812
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 39
SIO_000628: feature:5519869-5519987:1:exon

position:5519869:1
position: 5519869
reference: sequence
type: ForwardStrandPosition
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position:5519987:1
position: 5519987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:5520983-5521052:1:exon

position:5520983:1
position: 5520983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5521052:1
position: 5521052
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 41
SIO_000628: feature:5523485-5523601:1:exon

position:5523485:1
position: 5523485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5523601:1
position: 5523601
reference: sequence
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urn:…
SIO_000300: 42
SIO_000628: feature:5525008-5525217:1:exon

position:5525008:1
position: 5525008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5525217:1
position: 5525217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:5527467-5527655:1:exon

position:5527467:1
position: 5527467
reference: sequence
type: ForwardStrandPosition
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position:5527655:1
position: 5527655
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 44
SIO_000628: feature:5528301-5528478:1:exon

position:5528301:1
position: 5528301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5528478:1
position: 5528478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:5529321-5529466:1:exon

position:5529321:1
position: 5529321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5529466:1
position: 5529466
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 46
SIO_000628: feature:5541434-5541514:1:exon

position:5541434:1
position: 5541434
reference: sequence
type: ForwardStrandPosition
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position:5541514:1
position: 5541514
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 47
SIO_000628: feature:5542077-5542190:1:exon

position:5542077:1
position: 5542077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5542190:1
position: 5542190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:5547026-5547214:1:exon

position:5547026:1
position: 5547026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5547214:1
position: 5547214
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 49
SIO_000628: feature:5547574-5547720:1:exon

position:5547574:1
position: 5547574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5547720:1
position: 5547720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:5548772-5548960:1:exon

position:5548772:1
position: 5548772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5548960:1
position: 5548960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:5558220-5558405:1:exon

position:5558220:1
position: 5558220
reference: sequence
type: ForwardStrandPosition
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position:5558405:1
position: 5558405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:5558965-5559159:1:exon

position:5558965:1
position: 5558965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5559159:1
position: 5559159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:5560880-5561053:1:exon

position:5560880:1
position: 5560880
reference: sequence
type: ForwardStrandPosition
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position:5561053:1
position: 5561053
reference: sequence
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urn:…
SIO_000300: 54
SIO_000628: feature:5562946-5563119:1:exon

position:5562946:1
position: 5562946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5563119:1
position: 5563119
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 55
SIO_000628: feature:5567072-5567245:1:exon

position:5567072:1
position: 5567072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5567245:1
position: 5567245
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 56
SIO_000628: feature:5568351-5568536:1:exon

position:5568351:1
position: 5568351
reference: sequence
type: ForwardStrandPosition
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position:5568536:1
position: 5568536
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 57
SIO_000628: feature:5569273-5569446:1:exon

position:5569273:1
position: 5569273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5569446:1
position: 5569446
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 58
SIO_000628: feature:5572012-5572194:1:exon

position:5572012:1
position: 5572012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5572194:1
position: 5572194
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 59
SIO_000628: feature:5574040-5574216:1:exon

position:5574040:1
position: 5574040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5574216:1
position: 5574216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:5578650-5578829:1:exon

position:5578650:1
position: 5578650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5578829:1
position: 5578829
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 61
SIO_000628: feature:5580482-5580655:1:exon

position:5580482:1
position: 5580482
reference: sequence
type: ForwardStrandPosition
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position:5580655:1
position: 5580655
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 62
SIO_000628: feature:5585383-5585556:1:exon

position:5585383:1
position: 5585383
reference: sequence
type: ForwardStrandPosition
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position:5585556:1
position: 5585556
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 63
SIO_000628: feature:5587669-5587742:1:exon

position:5587669:1
position: 5587669
reference: sequence
type: ForwardStrandPosition
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position:5587742:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 64
SIO_000628: feature:5594299-5594410:1:exon

position:5594299:1
position: 5594299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5594410:1
position: 5594410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:5596680-5596859:1:exon

position:5596680:1
position: 5596680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5596859:1
position: 5596859
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 66
SIO_000628: feature:5599331-5599396:1:exon

position:5599331:1
position: 5599331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5599396:1
position: 5599396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:5602842-5603000:1:exon

position:5602842:1
position: 5602842
reference: sequence
type: ForwardStrandPosition
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position:5603000:1
position: 5603000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 68
SIO_000628: feature:5604859-5604971:1:exon

position:5604859:1
position: 5604859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5604971:1
position: 5604971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 69
SIO_000628: feature:5607675-5607762:1:exon

position:5607675:1
position: 5607675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5607762:1
position: 5607762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 70
SIO_000628: feature:5609095-5609230:1:exon

position:5609095:1
position: 5609095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5609230:1
position: 5609230
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 71
SIO_000628: feature:5610459-5612391:1:exon

position:5610459:1
position: 5610459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Csmd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Csmd3
product: CUB and Sushi multiple domains 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026785885.1
SIO_010081: Csmd3
subclass of: SO_0000673
so part of: Csmd3
location: join(4659402..4659963,4750593..4750815,4788303..4788415,4867168..4867362,4914601..4914808,4969560..4969672,5036672..5036759,5057658..5057782,5120006..5120127,5141368..5141471,5149365..5149477,5251906..5252088,5254256..5254582,5257577..5257771,5275581..5275719,5279391..5279578,5281456..5281644,5286106..5286222,5290670..5290885,5292967..5293155,5329239..5329408,5337667..5337823,5351637..5351828,5355961..5356087,5357647..5357849,5373313..5373504,5381115..5381253,5384179..5384366,5391410..5391604,5412364..5412480,5476851..5477054,5489725..5489849,5498212..5498308,5500708..5500812,5519869..5519987,5520983..5521052,5523485..5523601,5525008..5525217,5527467..5527655,5528301..5528478,5529321..5529466,5541434..5541514,5542077..5542190,5547026..5547214,5547574..5547720,5548772..5548960,5558220..5558405,5558965..5559159,5560880..5561053,5562946..5563119,5567072..5567245,5568351..5568536,5569273..5569446,5572012..5572194,5574040..5574216,5578650..5578829,5580482..5580655,5585383..5585556,5587669..5587742,5594299..5594410,5596680..5596859,5599331..5599396,5602842..5603000,5604859..5604971,5607675..5607762,5609095..5609230,5610459..5610618)
location: region:4659402-5610618:1
so has part: feature:4659402-4659963:1:exon
so has part: feature:4750593-4750815:1:exon
so has part: feature:4788303-4788415:1:exon
so has part: feature:4867168-4867362:1:exon
so has part: feature:4914601-4914808:1:exon
so has part: feature:4969560-4969672:1:exon
so has part: feature:5036672-5036759:1:exon
so has part: feature:5057658-5057782:1:exon
so has part: feature:5120006-5120127:1:exon
so has part: feature:5141368-5141471:1:exon
so has part: feature:5149365-5149477:1:exon
so has part: feature:5251906-5252088:1:exon
so has part: feature:5254256-5254582:1:exon
so has part: feature:5257577-5257771:1:exon
so has part: feature:5275581-5275719:1:exon
so has part: feature:5279391-5279578:1:exon
so has part: feature:5281456-5281644:1:exon
so has part: feature:5286106-5286222:1:exon
so has part: feature:5290670-5290885:1:exon
so has part: feature:5292967-5293155:1:exon
so has part: feature:5329239-5329408:1:exon
so has part: feature:5337667-5337823:1:exon
so has part: feature:5351637-5351828:1:exon
so has part: feature:5355961-5356087:1:exon
so has part: feature:5357647-5357849:1:exon
so has part: feature:5373313-5373504:1:exon
so has part: feature:5381115-5381253:1:exon
so has part: feature:5384179-5384366:1:exon
so has part: feature:5391410-5391604:1:exon
so has part: feature:5412364-5412480:1:exon
so has part: feature:5476851-5477054:1:exon
so has part: feature:5489725-5489849:1:exon
so has part: feature:5498212-5498308:1:exon
so has part: feature:5500708-5500812:1:exon
so has part: feature:5519869-5519987:1:exon
so has part: feature:5520983-5521052:1:exon
so has part: feature:5523485-5523601:1:exon
so has part: feature:5525008-5525217:1:exon
so has part: feature:5527467-5527655:1:exon
so has part: feature:5528301-5528478:1:exon
so has part: feature:5529321-5529466:1:exon
so has part: feature:5541434-5541514:1:exon
so has part: feature:5542077-5542190:1:exon
so has part: feature:5547026-5547214:1:exon
so has part: feature:5547574-5547720:1:exon
so has part: feature:5548772-5548960:1:exon
so has part: feature:5558220-5558405:1:exon
so has part: feature:5558965-5559159:1:exon
so has part: feature:5560880-5561053:1:exon
so has part: feature:5562946-5563119:1:exon
so has part: feature:5567072-5567245:1:exon
so has part: feature:5568351-5568536:1:exon
so has part: feature:5569273-5569446:1:exon
so has part: feature:5572012-5572194:1:exon
so has part: feature:5574040-5574216:1:exon
so has part: feature:5578650-5578829:1:exon
so has part: feature:5580482-5580655:1:exon
so has part: feature:5585383-5585556:1:exon
so has part: feature:5587669-5587742:1:exon
so has part: feature:5594299-5594410:1:exon
so has part: feature:5596680-5596859:1:exon
so has part: feature:5599331-5599396:1:exon
so has part: feature:5602842-5603000:1:exon
so has part: feature:5604859-5604971:1:exon
so has part: feature:5607675-5607762:1:exon
so has part: feature:5609095-5609230:1:exon
so has part: feature:5610459-5610618:1:exon

position:5610618:1
position: 5610618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4659402-4659963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4750593-4750815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4788303-4788415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4867168-4867362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4914601-4914808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4969560-4969672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5036672-5036759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5057658-5057782:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5120006-5120127:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5141368-5141471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5149365-5149477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5251906-5252088:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5254256-5254582:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5257577-5257771:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5275581-5275719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5279391-5279578:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5281456-5281644:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5286106-5286222:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5290670-5290885:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5292967-5293155:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5329239-5329408:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5337667-5337823:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5351637-5351828:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5355961-5356087:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5357647-5357849:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5373313-5373504:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5381115-5381253:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5384179-5384366:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5391410-5391604:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5412364-5412480:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5476851-5477054:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5489725-5489849:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5498212-5498308:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5500708-5500812:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5519869-5519987:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5520983-5521052:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5523485-5523601:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:5525008-5525217:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:5527467-5527655:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:5528301-5528478:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:5529321-5529466:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:5541434-5541514:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:5542077-5542190:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:5547026-5547214:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:5547574-5547720:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:5548772-5548960:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:5558220-5558405:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:5558965-5559159:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:5560880-5561053:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:5562946-5563119:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:5567072-5567245:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:5568351-5568536:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:5569273-5569446:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:5572012-5572194:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:5574040-5574216:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:5578650-5578829:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:5580482-5580655:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:5585383-5585556:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:5587669-5587742:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:5594299-5594410:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:5596680-5596859:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:5599331-5599396:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:5602842-5603000:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:5604859-5604971:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:5607675-5607762:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:5609095-5609230:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:5610459-5610618:1:exon

Csmd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Csmd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUB and sushi domain-containing protein 3 isoform X2
translation: MKGSRKGESRAKESKPREPGTRRCAKCGRLDFILRKKMGIKSGFTFWNLVFLLTLSCVKGFIYTCGGTLKGLNGTIESPGFPYGYPNGANCTWVIIAEERNRIQIVFQSFALEEEYDYLSLYDGHPHPTNFRTRLTGFHLPPPVTSTKSVFSLRLTSDFAVSAHGFKVYYEELQSSSCGNPGVPPKGVLYGTRFDVGDKIRYSCVTGYILDGHPQLTCIANSVNTASWDFPVPICRAEDACGGTMRGSSGIISSPGFPNEYHNNADCTWTIVAEPGDTISLIFTDFQMEEKYDYLEIEGSEPPTIWLSGMNIPPPIISNKNWLRLHFVTDSNHRYRGFSAPYQGSPLTHTTSTGELEEHIRTATGALAVASTPAEVTASRATAVSSHRLSEEQRVQETSLRDSGLDHNTSKDQPSPHPADTQSTRRRPRNAEQIERTKELAGVTHRVKKAIDFKSRGFKLFPGKDNSNKFSLLNEGGIKTASNLCPDPGEPENGKRIGSDFSLGSTVQFSCDEDYVLQGAKSITCQRIAEVFAAWSDHRPVCKVKTCGSNLQGPSGTFTSPNFPFQYDSNAQCVWVITAVNTNKVIQINFEEFDLEIGYDTLTIGDGGEVGDPRTVLQVLTGSFVPDLIVSMRSQMWLHLQTDESVGSVGFKVNYKEIEKESCGDPGTPLYGIREGDGFSNRDVLRFECQFGFELIGEKSIVCQENNQWSANIPICIFPCLSNFTAPMGTVLSPDYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAVKDGDSPDSPILGTFTGAEVPSHLTSNSHILRLEFQADHSMSGRGFNITYNTFGHNECPDPGIPINARRFGDNFQLGSSISVICEEGFIKTQGTETITCILMDGKVMWSGPIPRCGAPCGGHFSAPSGVILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELNYDVLEVHDGPNLLSPLLGSYNGTQVPQFLFSSSNFIYLLFTTDNSRSNNGFKIHYESVTVNTYSCLDPGIPVHGRRYGHDFSIGSTVSFSCDPGYRLSHEEPLLCEKNHWWSHPLPTCDALCGGDVRGPSGTILSPGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLEDHHDYLLITENGSFTQPLARLTGSELPSTINAGLYGNFRAQLRFISDFSISYEGFNITFSEYNLEPCEDPGIPQYGSRVGFSFGVGDTLTFSCSSGYRLEGSSEIICLGGGRRVWSAPLPRCVAECGASATNNEGILLSPNYPLNYENNHECIYSLQVQAGKGINISARTFHLAQGDVLKIYDGKDKTTHLLGAFTGASMRGLTLSSTSNQLWLEFNSDSEGTDEGFQLVYTSFELSHCEDPGIPQFGYKISDQGHFAGSTIIYGCNPGYTLHGSSLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNNLRCMWMIEVDPGNIVSLQFLAFDTEASHDILRVWDGPPENEMLLKEVSGSLIPDGIHSTLNVVTIQFDTDFYISKSGFAIQFSSSVATACRDPGVPMNGTRNGDGREPGDTVVFQCDPGYELQGQERITCIQVENRYFWQPSPPVCIAPCGGNLTGSSGFILSPNFPHPYPHSRDCDWTISVNADYVISLAFISFSIEPNYDFLYIYDGPDSNSPLIGSFQDSKLPERIESSSNTMHLAFRSDGSVSYTGFHLEYKAKLRESCFDPGNIMNGTRLGMDYKLGSTVTYYCDAGYVLQGYSTLTCIMGDDGRPGWNRVLPSCHAPCGSRSTGSEGTVLSPNYPKNYSVDHNCVYSIAVPKEFVVFGQFVFFQTSLHDVVEVFDGSTQQSPLLSSLSGSHSGESLPLSSGNQITIRFTSVGPITAKGFHFVYQAVPRTSSTQCSSVPEPRFGRRIGNDFAVGSLVLFECNPGYILHGSRAIRCDTVPNSLAQWNDSLPACIVPCGGVLTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQVQVVSFATEHNWDSLDFYDGGDN…
SIO_010081: Csmd3
subclass of: SO_0000673
so part of: Csmd3
location: join(4659786..4659963,4750593..4750815,4788303..4788415,4867168..4867362,4914601..4914808,4969560..4969672,5008565..5008873,5030264..5030341,5036672..5036759,5057658..5057782,5120006..5120127,5141368..5141471,5149365..5149477,5251906..5252088,5254256..5254582,5257577..5257771,5275581..5275719,5279391..5279578,5281456..5281644,5286106..5286222,5290670..5290885,5292967..5293155,5329239..5329408,5337667..5337823,5351637..5351828,5355961..5356087,5357647..5357849,5373313..5373504,5381115..5381253,5384179..5384366,5391410..5391604,5412364..5412480,5474657..5474770,5475240..5475335,5476851..5477054,5489725..5489849,5498212..5498308,5500708..5500812,5519869..5519987,5520983..5521052,5523485..5523601,5525008..5525217,5527467..5527655,5528301..5528478,5529321..5529466,5541434..5541514,5542077..5542190,5547026..5547214,5547574..5547720,5548772..5548960,5558220..5558405,5558965..5559159,5560880..5561053,5562946..5563119,5567072..5567245,5568351..5568536,5569273..5569446,5572012..5572194,5574040..5574216,5578650..5578829,5580482..5580655,5585383..5585556,5587669..5587742,5594299..5594410,5596680..5596859,5599331..5599396,5602842..5603000,5604859..5604971,5607675..5607762,5609095..5609230,5610459..5610618)
location: region:4659786-5610618:1
so has part: feature:4659786-4659963:1:exon
so has part: feature:4750593-4750815:1:exon
so has part: feature:4788303-4788415:1:exon
so has part: feature:4867168-4867362:1:exon
so has part: feature:4914601-4914808:1:exon
so has part: feature:4969560-4969672:1:exon
so has part: feature:5008565-5008873:1:exon
so has part: feature:5030264-5030341:1:exon
so has part: feature:5036672-5036759:1:exon
so has part: feature:5057658-5057782:1:exon
so has part: feature:5120006-5120127:1:exon
so has part: feature:5141368-5141471:1:exon
so has part: feature:5149365-5149477:1:exon
so has part: feature:5251906-5252088:1:exon
so has part: feature:5254256-5254582:1:exon
so has part: feature:5257577-5257771:1:exon
so has part: feature:5275581-5275719:1:exon
so has part: feature:5279391-5279578:1:exon
so has part: feature:5281456-5281644:1:exon
so has part: feature:5286106-5286222:1:exon
so has part: feature:5290670-5290885:1:exon
so has part: feature:5292967-5293155:1:exon
so has part: feature:5329239-5329408:1:exon
so has part: feature:5337667-5337823:1:exon
so has part: feature:5351637-5351828:1:exon
so has part: feature:5355961-5356087:1:exon
so has part: feature:5357647-5357849:1:exon
so has part: feature:5373313-5373504:1:exon
so has part: feature:5381115-5381253:1:exon
so has part: feature:5384179-5384366:1:exon
so has part: feature:5391410-5391604:1:exon
so has part: feature:5412364-5412480:1:exon
so has part: feature:5474657-5474770:1:exon
so has part: feature:5475240-5475335:1:exon
so has part: feature:5476851-5477054:1:exon
so has part: feature:5489725-5489849:1:exon
so has part: feature:5498212-5498308:1:exon
so has part: feature:5500708-5500812:1:exon
so has part: feature:5519869-5519987:1:exon
so has part: feature:5520983-5521052:1:exon
so has part: feature:5523485-5523601:1:exon
so has part: feature:5525008-5525217:1:exon
so has part: feature:5527467-5527655:1:exon
so has part: feature:5528301-5528478:1:exon
so has part: feature:5529321-5529466:1:exon
so has part: feature:5541434-5541514:1:exon
so has part: feature:5542077-5542190:1:exon
so has part: feature:5547026-5547214:1:exon
so has part: feature:5547574-5547720:1:exon
so has part: feature:5548772-5548960:1:exon
so has part: feature:5558220-5558405:1:exon
so has part: feature:5558965-5559159:1:exon
so has part: feature:5560880-5561053:1:exon
so has part: feature:5562946-5563119:1:exon
so has part: feature:5567072-5567245:1:exon
so has part: feature:5568351-5568536:1:exon
so has part: feature:5569273-5569446:1:exon
so has part: feature:5572012-5572194:1:exon
so has part: feature:5574040-5574216:1:exon
so has part: feature:5578650-5578829:1:exon
so has part: feature:5580482-5580655:1:exon
so has part: feature:5585383-5585556:1:exon
so has part: feature:5587669-5587742:1:exon
so has part: feature:5594299-5594410:1:exon
so has part: feature:5596680-5596859:1:exon
so has part: feature:5599331-5599396:1:exon

XP_026641687.1
type: Protein
SIO_000068: ncbiprotein

position:4659786:1
position: 4659786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4659786-4659963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4750593-4750815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4788303-4788415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4867168-4867362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4914601-4914808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4969560-4969672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5008565-5008873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5030264-5030341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5036672-5036759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5057658-5057782:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5120006-5120127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5141368-5141471:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5149365-5149477:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5251906-5252088:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5254256-5254582:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5257577-5257771:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5275581-5275719:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5279391-5279578:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5281456-5281644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5286106-5286222:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5290670-5290885:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5292967-5293155:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5329239-5329408:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5337667-5337823:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5351637-5351828:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5355961-5356087:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5357647-5357849:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5373313-5373504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5381115-5381253:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5384179-5384366:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5391410-5391604:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5412364-5412480:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5474657-5474770:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5475240-5475335:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5476851-5477054:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5489725-5489849:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5498212-5498308:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:5500708-5500812:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:5519869-5519987:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:5520983-5521052:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:5523485-5523601:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:5525008-5525217:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:5527467-5527655:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:5528301-5528478:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:5529321-5529466:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:5541434-5541514:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:5542077-5542190:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:5547026-5547214:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:5547574-5547720:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:5548772-5548960:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:5558220-5558405:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:5558965-5559159:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:5560880-5561053:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:5562946-5563119:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:5567072-5567245:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:5568351-5568536:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:5569273-5569446:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:5572012-5572194:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:5574040-5574216:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:5578650-5578829:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:5580482-5580655:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:5585383-5585556:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:5587669-5587742:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:5594299-5594410:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:5596680-5596859:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:5599331-5599396:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:5602842-5603000:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:5604859-5604971:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:5607675-5607762:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:5609095-5609230:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:5610459-5610618:1:exon

Csmd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Csmd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUB and sushi domain-containing protein 3 isoform X1
translation: MKGSRKGESRAKESKPREPGTRRCAKCGRLDFILRKKMGIKSGFTFWNLVFLLTLSCVKGFIYTCGGTLKGLNGTIESPGFPYGYPNGANCTWVIIAEERNRIQIVFQSFALEEEYDYLSLYDGHPHPTNFRTRLTGFHLPPPVTSTKSVFSLRLTSDFAVSAHGFKVYYEELQSSSCGNPGVPPKGVLYGTRFDVGDKIRYSCVTGYILDGHPQLTCIANSVNTASWDFPVPICRAEDACGGTMRGSSGIISSPGFPNEYHNNADCTWTIVAEPGDTISLIFTDFQMEEKYDYLEIEGSEPPTIWLSGMNIPPPIISNKNWLRLHFVTDSNHRYRGFSAPYQVNEGGIKTASNLCPDPGEPENGKRIGSDFSLGSTVQFSCDEDYVLQGAKSITCQRIAEVFAAWSDHRPVCKVKTCGSNLQGPSGTFTSPNFPFQYDSNAQCVWVITAVNTNKVIQINFEEFDLEIGYDTLTIGDGGEVGDPRTVLQVLTGSFVPDLIVSMRSQMWLHLQTDESVGSVGFKVNYKEIEKESCGDPGTPLYGIREGDGFSNRDVLRFECQFGFELIGEKSIVCQENNQWSANIPICIFPCLSNFTAPMGTVLSPDYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAVKDGDSPDSPILGTFTGAEVPSHLTSNSHILRLEFQADHSMSGRGFNITYNTFGHNECPDPGIPINARRFGDNFQLGSSISVICEEGFIKTQGTETITCILMDGKVMWSGPIPRCGAPCGGHFSAPSGVILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELNYDVLEVHDGPNLLSPLLGSYNGTQVPQFLFSSSNFIYLLFTTDNSRSNNGFKIHYESVTVNTYSCLDPGIPVHGRRYGHDFSIGSTVSFSCDPGYRLSHEEPLLCEKNHWWSHPLPTCDALCGGDVRGPSGTILSPGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLEDHHDYLLITENGSFTQPLARLTGSELPSTINAGLYGNFRAQLRFISDFSISYEGFNITFSEYNLEPCEDPGIPQYGSRVGFSFGVGDTLTFSCSSGYRLEGSSEIICLGGGRRVWSAPLPRCVAECGASATNNEGILLSPNYPLNYENNHECIYSLQVQAGKGINISARTFHLAQGDVLKIYDGKDKTTHLLGAFTGASMRGLTLSSTSNQLWLEFNSDSEGTDEGFQLVYTSFELSHCEDPGIPQFGYKISDQGHFAGSTIIYGCNPGYTLHGSSLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNNLRCMWMIEVDPGNIVSLQFLAFDTEASHDILRVWDGPPENEMLLKEVSGSLIPDGIHSTLNVVTIQFDTDFYISKSGFAIQFSSSVATACRDPGVPMNGTRNGDGREPGDTVVFQCDPGYELQGQERITCIQVENRYFWQPSPPVCIAPCGGNLTGSSGFILSPNFPHPYPHSRDCDWTISVNADYVISLAFISFSIEPNYDFLYIYDGPDSNSPLIGSFQDSKLPERIESSSNTMHLAFRSDGSVSYTGFHLEYKAKLRESCFDPGNIMNGTRLGMDYKLGSTVTYYCDAGYVLQGYSTLTCIMGDDGRPGWNRVLPSCHAPCGSRSTGSEGTVLSPNYPKNYSVDHNCVYSIAVPKEFAVPRTSSTQCSSVPEPRFGRRIGNDFAVGSLVLFECNPGYILHGSRAIRCDTVPNSLAQWNDSLPACIVPCGGVLTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQVQVVSFATEHNWDSLDFYDGGDNNAPRLGSYSGTTIPHLLNSTSNNLYLNFQSDISVSAAGFHLEYTAIGLDSCPEPQTPSSGIKVGDRYMVGDVVSFQCDQGYSLQGHSYITCMPGPVRRWNYPIPICLAQCGGSMSDFSGVILSPGFPGNYPSSLDCTWTIKLPIGFGVHLQFVNFSTETIHDYLEVRSGSSETSTVIGRLSGPQIPSSLFSTTHETSLY…
SIO_010081: Csmd3
subclass of: SO_0000673
so part of: Csmd3
location: join(4659786..4659963,4750593..4750815,4788303..4788415,4867168..4867362,4914601..4914808,4969560..4969672,5036672..5036759,5057658..5057782,5120006..5120127,5141368..5141471,5149365..5149477,5251906..5252088,5254256..5254582,5257577..5257771,5275581..5275719,5279391..5279578,5281456..5281644,5286106..5286222,5290670..5290885,5292967..5293155,5329239..5329408,5337667..5337823,5351637..5351828,5355961..5356087,5357647..5357849,5373313..5373504,5381115..5381253,5384179..5384366,5391410..5391604,5412364..5412480,5476851..5477054,5489725..5489849,5498212..5498308,5500708..5500812,5519869..5519987,5520983..5521052,5523485..5523601,5525008..5525217,5527467..5527655,5528301..5528478,5529321..5529466,5541434..5541514,5542077..5542190,5547026..5547214,5547574..5547720,5548772..5548960,5558220..5558405,5558965..5559159,5560880..5561053,5562946..5563119,5567072..5567245,5568351..5568536,5569273..5569446,5572012..5572194,5574040..5574216,5578650..5578829,5580482..5580655,5585383..5585556,5587669..5587742,5594299..5594410,5596680..5596859,5599331..5599396,5602842..5603000,5604859..5604971,5607675..5607762,5609095..5609230,5610459..5610618)
location: region:4659786-5610618:1
so has part: feature:4659786-4659963:1:exon
so has part: feature:4750593-4750815:1:exon
so has part: feature:4788303-4788415:1:exon
so has part: feature:4867168-4867362:1:exon
so has part: feature:4914601-4914808:1:exon
so has part: feature:4969560-4969672:1:exon
so has part: feature:5036672-5036759:1:exon
so has part: feature:5057658-5057782:1:exon
so has part: feature:5120006-5120127:1:exon
so has part: feature:5141368-5141471:1:exon
so has part: feature:5149365-5149477:1:exon
so has part: feature:5251906-5252088:1:exon
so has part: feature:5254256-5254582:1:exon
so has part: feature:5257577-5257771:1:exon
so has part: feature:5275581-5275719:1:exon
so has part: feature:5279391-5279578:1:exon
so has part: feature:5281456-5281644:1:exon
so has part: feature:5286106-5286222:1:exon
so has part: feature:5290670-5290885:1:exon
so has part: feature:5292967-5293155:1:exon
so has part: feature:5329239-5329408:1:exon
so has part: feature:5337667-5337823:1:exon
so has part: feature:5351637-5351828:1:exon
so has part: feature:5355961-5356087:1:exon
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so has part: feature:5373313-5373504:1:exon
so has part: feature:5381115-5381253:1:exon
so has part: feature:5384179-5384366:1:exon
so has part: feature:5391410-5391604:1:exon
so has part: feature:5412364-5412480:1:exon
so has part: feature:5476851-5477054:1:exon
so has part: feature:5489725-5489849:1:exon
so has part: feature:5498212-5498308:1:exon
so has part: feature:5500708-5500812:1:exon
so has part: feature:5519869-5519987:1:exon
so has part: feature:5520983-5521052:1:exon
so has part: feature:5523485-5523601:1:exon
so has part: feature:5525008-5525217:1:exon
so has part: feature:5527467-5527655:1:exon
so has part: feature:5528301-5528478:1:exon
so has part: feature:5529321-5529466:1:exon
so has part: feature:5541434-5541514:1:exon
so has part: feature:5542077-5542190:1:exon
so has part: feature:5547026-5547214:1:exon
so has part: feature:5547574-5547720:1:exon
so has part: feature:5548772-5548960:1:exon
so has part: feature:5558220-5558405:1:exon
so has part: feature:5558965-5559159:1:exon
so has part: feature:5560880-5561053:1:exon
so has part: feature:5562946-5563119:1:exon
so has part: feature:5567072-5567245:1:exon
so has part: feature:5568351-5568536:1:exon
so has part: feature:5569273-5569446:1:exon
so has part: feature:5572012-5572194:1:exon
so has part: feature:5574040-5574216:1:exon
so has part: feature:5578650-5578829:1:exon
so has part: feature:5580482-5580655:1:exon
so has part: feature:5585383-5585556:1:exon
so has part: feature:5587669-5587742:1:exon
so has part: feature:5594299-5594410:1:exon
so has part: feature:5596680-5596859:1:exon
so has part: feature:5599331-5599396:1:exon
so has part: feature:5602842-5603000:1:exon
so has part: feature:5604859-5604971:1:exon
so has part: feature:5607675-5607762:1:exon
so has part: feature:5609095-5609230:1:exon

XP_026641686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4659786-4659963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4750593-4750815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4788303-4788415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4867168-4867362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4914601-4914808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4969560-4969672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5036672-5036759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5057658-5057782:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5120006-5120127:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5141368-5141471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5149365-5149477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5251906-5252088:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5254256-5254582:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5257577-5257771:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5275581-5275719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5279391-5279578:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5281456-5281644:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5286106-5286222:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5290670-5290885:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5292967-5293155:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5329239-5329408:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5337667-5337823:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5351637-5351828:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5355961-5356087:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5357647-5357849:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5373313-5373504:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5381115-5381253:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5384179-5384366:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5391410-5391604:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5412364-5412480:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5476851-5477054:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5489725-5489849:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5498212-5498308:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5500708-5500812:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5519869-5519987:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5520983-5521052:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5523485-5523601:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:5525008-5525217:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:5527467-5527655:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:5528301-5528478:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:5529321-5529466:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:5541434-5541514:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:5542077-5542190:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:5547026-5547214:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:5547574-5547720:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:5548772-5548960:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:5558220-5558405:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:5558965-5559159:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:5560880-5561053:1:exon

urn:…
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SIO_000628: feature:5562946-5563119:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:5567072-5567245:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:5568351-5568536:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:5569273-5569446:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:5572012-5572194:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:5574040-5574216:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:5578650-5578829:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:5580482-5580655:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:5585383-5585556:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:5587669-5587742:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:5594299-5594410:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:5596680-5596859:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:5599331-5599396:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:5602842-5603000:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:5604859-5604971:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:5607675-5607762:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:5609095-5609230:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:5610459-5610618:1:exon

Ncam2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ncam2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6064100..6428729)
location: region:6064100-6428729:-1
so has part: feature:6064100-6428729:-1:exon
subclass of: SO_0000010

101983077
type: Gene
SIO_000068: ncbigene

position:6064100:-1
position: 6064100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6428729:-1
position: 6428729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6064100-6428729:-1:exon

Ncam2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ncam2
product: neural cell adhesion molecule 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026786021.1
SIO_010081: Ncam2
subclass of: SO_0000673
so part of: Ncam2
location: complement(join(6064100..6064586,6070355..6070535,6082630..6082751,6085744..6085863,6105999..6106172,6116522..6116618,6119978..6120165,6143937..6144087,6174334..6174479,6178309..6178469,6189289..6189406,6201604..6201741,6209169..6209312,6210175..6210381,6211602..6211676,6428476..6428729))
location: region:6064100-6428729:-1
so has part: feature:6428476-6428729:-1:exon
so has part: feature:6211602-6211676:-1:exon
so has part: feature:6210175-6210381:-1:exon
so has part: feature:6209169-6209312:-1:exon
so has part: feature:6201604-6201741:-1:exon
so has part: feature:6189289-6189406:-1:exon
so has part: feature:6178309-6178469:-1:exon
so has part: feature:6174334-6174479:-1:exon
so has part: feature:6143937-6144087:-1:exon
so has part: feature:6119978-6120165:-1:exon
so has part: feature:6116522-6116618:-1:exon
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so has part: feature:6085744-6085863:-1:exon
so has part: feature:6082630-6082751:-1:exon
so has part: feature:6070355-6070535:-1:exon
so has part: feature:6064100-6064586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6428476-6428729:-1:exon

position:6428476:-1
position: 6428476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6211602-6211676:-1:exon

position:6211602:-1
position: 6211602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6211676:-1
position: 6211676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6210175-6210381:-1:exon

position:6210175:-1
position: 6210175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6210381:-1
position: 6210381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6209169-6209312:-1:exon

position:6209169:-1
position: 6209169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6209312:-1
position: 6209312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6201604-6201741:-1:exon

position:6201604:-1
position: 6201604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6201741:-1
position: 6201741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6189289-6189406:-1:exon

position:6189289:-1
position: 6189289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6189406:-1
position: 6189406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6178309-6178469:-1:exon

position:6178309:-1
position: 6178309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6178469:-1
position: 6178469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6174334-6174479:-1:exon

position:6174334:-1
position: 6174334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6174479:-1
position: 6174479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6143937-6144087:-1:exon

position:6143937:-1
position: 6143937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6144087:-1
position: 6144087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6119978-6120165:-1:exon

position:6119978:-1
position: 6119978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6120165:-1
position: 6120165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6116522-6116618:-1:exon

position:6116522:-1
position: 6116522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6116618:-1
position: 6116618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6105999-6106172:-1:exon

position:6105999:-1
position: 6105999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6106172:-1
position: 6106172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6085744-6085863:-1:exon

position:6085744:-1
position: 6085744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6085863:-1
position: 6085863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6082630-6082751:-1:exon

position:6082630:-1
position: 6082630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6082751:-1
position: 6082751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6070355-6070535:-1:exon

position:6070355:-1
position: 6070355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6070535:-1
position: 6070535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6064100-6064586:-1:exon

position:6064586:-1
position: 6064586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ncam2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ncam2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural cell adhesion molecule 2
translation: MSLLLSFYLLGLLVSSGQALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVMVQKEGVRSRLTIYNANIEDAGIYRCQATDDKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTIPDNRFAVLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPVIVMPQKSFNATAERGEEMTLTCRASGSPDPTISWFRNGKLIEENEKYILKGSNTELTVRNIINKDGGSYVCKATNKAGEDEKQAFLQVFVQPHILQLQNETTSENGHVTLICEAEGEPIPEITWKRAVDGATFSEGDKSPDGRIEVKGQRGHSSLHIRDVKLSDSGRYDCEAASRIGGHQRSMHLDIEYAPKFVSNQTMYYSWEGNPINISCDVTSNPPASIHWRREKLVLPAKNTTHLKTYSVGRKMILEIAPTSENDFGRYNCTATNRIGTRFQEYILELADVPSSPHGVKIVDLSQTTAKILFNKPDSHGGVPIHHYQVDVKEMASETWKIVRSHGVQTMVVLSSLEPNTTYETRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKISITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDNCCEENTGENGGQSWQLNALGFSLIITMSLSCLF
SIO_010081: Ncam2
subclass of: SO_0000673
so part of: Ncam2
location: complement(join(6064480..6064586,6070355..6070535,6082630..6082751,6085744..6085863,6105999..6106172,6116522..6116618,6119978..6120165,6143937..6144087,6174334..6174479,6178309..6178469,6189289..6189406,6201604..6201741,6209169..6209312,6210175..6210381,6211602..6211676,6428476..6428530))
location: region:6064480-6428530:-1
so has part: feature:6428476-6428530:-1:exon
so has part: feature:6211602-6211676:-1:exon
so has part: feature:6210175-6210381:-1:exon
so has part: feature:6209169-6209312:-1:exon
so has part: feature:6201604-6201741:-1:exon
so has part: feature:6189289-6189406:-1:exon
so has part: feature:6178309-6178469:-1:exon
so has part: feature:6174334-6174479:-1:exon
so has part: feature:6143937-6144087:-1:exon
so has part: feature:6119978-6120165:-1:exon
so has part: feature:6116522-6116618:-1:exon
so has part: feature:6105999-6106172:-1:exon
so has part: feature:6085744-6085863:-1:exon
so has part: feature:6082630-6082751:-1:exon
so has part: feature:6070355-6070535:-1:exon
so has part: feature:6064480-6064586:-1:exon

XP_026641822.1
type: Protein
SIO_000068: ncbiprotein

position:6064480:-1
position: 6064480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6428530:-1
position: 6428530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6428476-6428530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6211602-6211676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6210175-6210381:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6209169-6209312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6201604-6201741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6189289-6189406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6178309-6178469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6174334-6174479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6143937-6144087:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6119978-6120165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6116522-6116618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6105999-6106172:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6085744-6085863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6082630-6082751:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6070355-6070535:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6064480-6064586:-1:exon

LOC113457616
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457616
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6140660..6141446
location: region:6140660-6141446:1
so has part: feature:6140660-6141446:1:exon

113457616
type: Gene
SIO_000068: ncbigene

position:6140660:1
position: 6140660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6141446:1
position: 6141446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6140660-6141446:1:exon

LOC113457616
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457616
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113457616
subclass of: SO_0000673
so part of: LOC113457616
location: 6140660..6141446
location: region:6140660-6141446:1
so has part: feature:6140660-6141446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6140660-6141446:1:exon

LOC101983359
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101983359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <6651770..6672447
location: region:6651770-6672447:1
so has part: feature:6651770-6672447:1:exon
subclass of: SO_0000010

101983359
type: Gene
SIO_000068: ncbigene

position:6651770:1
position: 6651770
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6672447:1
position: 6672447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6651770-6672447:1:exon

LOC101983359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101983359
product: zinc finger protein 60-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026785841.1
SIO_010081: LOC101983359
subclass of: SO_0000673
so part of: LOC101983359
location: join(<6651770..6651979,6660921..6660957,6662108..6662275,6669177..6672447)
location: region:6651770-6672447:1
so has part: feature:6651770-6651979:1:exon
so has part: feature:6660921-6660957:1:exon
so has part: feature:6662108-6662275:1:exon
so has part: feature:6669177-6672447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6651770-6651979:1:exon

position:6651979:1
position: 6651979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6660921-6660957:1:exon

position:6660921:1
position: 6660921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6660957:1
position: 6660957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6662108-6662275:1:exon

position:6662108:1
position: 6662108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6662275:1
position: 6662275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6669177-6672447:1:exon

position:6669177:1
position: 6669177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101983359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101983359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 60-like
translation: LWFQGSVTFRDVAVVFSQEEWACLDAAQRVLYRDMMLETYRNLLTVGKVSSKLLAFLPLNEKTGHLSCGSEVGCHKGRHCAGGSQVAAVSHETMRHVPKMQADRWECHICRSLKMAGPRQGATWLRARDRHIDRLTIQDLDSDSEAQKISPDNHSINLPKESIKHISKTFDLQGSSFSNGPNCSTFKELQSCQKGNADQTMSNREKLPLYTSQTLPHDADKAFECQECGECFGCSSSLVQHQASHAGEKPCDFREEGVKALKPQQLTRPQKSHSAERHFRCEECGESFKHLSMLLQHTRIHSAVKTFECKECGKAFNHHSNLMQHQKSHSGEKPGQCKECEKAHAVLAQLTTQTQDSHTGEKSSRCKQCGKTVSTGSYLVQHQSAHTGEKPFECKVCEKASRLQSYLSEHQKTHTDEKPFKCKLCGSAFRRKYHLTEHQGIHSDVKPYQCKECGKFFRRRSNFTVHQSIHTNMKPFKCKLCGSAFRLQSLLTQHQRIHTDVKPYQCKECGKHFRRRSNFTEHQSIHTGKKPFECKECGKVFRLNTHLIRHQRFHSGERSFECKECGEAFRLLAHLKSHQIIHSSEKLYECKECGKSFKRVSTLVQHRITHIGVKPFQCKECGKAFNRRSNLTQHQKTHSGERPFQCKDCGKSFSVLTQLTRHKSIHTGKKSFKCEQCGSAFRLHYQLTQHQKIHTDVKPYQCKVCGKGFVRGTGLRIHEKTHSDEKPFKCKECGKAFRIQSELTQHQRTHTDMKPYQCKVCGKGFVRGRGLRIHQRIHTGEKPFKCSECGEAFRYDYQFLGHFRMHSGKNPYECKECGKFFTRSEYLKAHQKIHTDEKP
SIO_010081: LOC101983359
subclass of: SO_0000673
so part of: LOC101983359
location: join(<6651770..6651979,6660921..6660957,6662108..6662275,6669177..6671281)
location: region:6651770-6671281:1
so has part: feature:6651770-6651979:1:exon
so has part: feature:6660921-6660957:1:exon
so has part: feature:6662108-6662275:1:exon
so has part: feature:6669177-6671281:1:exon

XP_026641642.1
type: Protein
SIO_000068: ncbiprotein

position:6671281:1
position: 6671281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6651770-6651979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6660921-6660957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6662108-6662275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6669177-6671281:1:exon

LOC113457637
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457637
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 6970701..6970800
location: region:6970701-6970800:1
so has part: feature:6970701-6970800:1:exon

113457637
type: Gene
SIO_000068: ncbigene

position:6970701:1
position: 6970701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6970800:1
position: 6970800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6970701-6970800:1:exon

LOC113457637
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457637
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC113457637
subclass of: SO_0000673
so part of: LOC113457637
location: 6970701..6970800
location: region:6970701-6970800:1
so has part: feature:6970701-6970800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6970701-6970800:1:exon

Tmprss15
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmprss15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8353141..8460445
location: region:8353141-8460445:1
so has part: feature:8353141-8460445:1:exon
subclass of: SO_0000010

102002871
type: Gene
SIO_000068: ncbigene

position:8353141:1
position: 8353141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8460445:1
position: 8460445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8353141-8460445:1:exon

Tmprss15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmprss15
product: transmembrane serine protease 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_005360611.1
SIO_010081: Tmprss15
subclass of: SO_0000673
so part of: Tmprss15
location: join(8353141..8353285,8356083..8356213,8356451..8356518,8365308..8365459,8369045..8369089,8369604..8369640,8369734..8369750,8370045..8370093,8377360..8377487,8381490..8381598,8385433..8385539,8392127..8392267,8392914..8393063,8403720..8403825,8404124..8404274,8406886..8407021,8413244..8413333,8415510..8415635,8417364..8417504,8429124..8429234,8430996..8431128,8442482..8442577,8445934..8445983,8446119..8446305,8450429..8450610,8452160..8452255,8456905..8457044,8460290..8460445)
location: region:8353141-8460445:1
so has part: feature:8353141-8353285:1:exon
so has part: feature:8356083-8356213:1:exon
so has part: feature:8356451-8356518:1:exon
so has part: feature:8365308-8365459:1:exon
so has part: feature:8369045-8369089:1:exon
so has part: feature:8369604-8369640:1:exon
so has part: feature:8369734-8369750:1:exon
so has part: feature:8370045-8370093:1:exon
so has part: feature:8377360-8377487:1:exon
so has part: feature:8381490-8381598:1:exon
so has part: feature:8385433-8385539:1:exon
so has part: feature:8392127-8392267:1:exon
so has part: feature:8392914-8393063:1:exon
so has part: feature:8403720-8403825:1:exon
so has part: feature:8404124-8404274:1:exon
so has part: feature:8406886-8407021:1:exon
so has part: feature:8413244-8413333:1:exon
so has part: feature:8415510-8415635:1:exon
so has part: feature:8417364-8417504:1:exon
so has part: feature:8429124-8429234:1:exon
so has part: feature:8430996-8431128:1:exon
so has part: feature:8442482-8442577:1:exon
so has part: feature:8445934-8445983:1:exon
so has part: feature:8446119-8446305:1:exon
so has part: feature:8450429-8450610:1:exon
so has part: feature:8452160-8452255:1:exon
so has part: feature:8456905-8457044:1:exon
so has part: feature:8460290-8460445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8353141-8353285:1:exon

position:8353285:1
position: 8353285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8356083-8356213:1:exon

position:8356083:1
position: 8356083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8356213:1
position: 8356213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8356451-8356518:1:exon

position:8356451:1
position: 8356451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8356518:1
position: 8356518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8365308-8365459:1:exon

position:8365308:1
position: 8365308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8365459:1
position: 8365459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8369045-8369089:1:exon

position:8369045:1
position: 8369045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8369089:1
position: 8369089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8369604-8369640:1:exon

position:8369604:1
position: 8369604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8369640:1
position: 8369640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8369734-8369750:1:exon

position:8369734:1
position: 8369734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8369750:1
position: 8369750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8370045-8370093:1:exon

position:8370045:1
position: 8370045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8370093:1
position: 8370093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8377360-8377487:1:exon

position:8377360:1
position: 8377360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8377487:1
position: 8377487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8381490-8381598:1:exon

position:8381490:1
position: 8381490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8381598:1
position: 8381598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8385433-8385539:1:exon

position:8385433:1
position: 8385433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8385539:1
position: 8385539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8392127-8392267:1:exon

position:8392127:1
position: 8392127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8392267:1
position: 8392267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8392914-8393063:1:exon

position:8392914:1
position: 8392914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8393063:1
position: 8393063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8403720-8403825:1:exon

position:8403720:1
position: 8403720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8403825:1
position: 8403825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8404124-8404274:1:exon

position:8404124:1
position: 8404124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8404274:1
position: 8404274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8406886-8407021:1:exon

position:8406886:1
position: 8406886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8407021:1
position: 8407021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8413244-8413333:1:exon

position:8413244:1
position: 8413244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8413333:1
position: 8413333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8415510-8415635:1:exon

position:8415510:1
position: 8415510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8415635:1
position: 8415635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8417364-8417504:1:exon

position:8417364:1
position: 8417364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8417504:1
position: 8417504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8429124-8429234:1:exon

position:8429124:1
position: 8429124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8429234:1
position: 8429234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8430996-8431128:1:exon

position:8430996:1
position: 8430996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8431128:1
position: 8431128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8442482-8442577:1:exon

position:8442482:1
position: 8442482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8442577:1
position: 8442577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:8445934-8445983:1:exon

position:8445934:1
position: 8445934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8445983:1
position: 8445983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:8446119-8446305:1:exon

position:8446119:1
position: 8446119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8446305:1
position: 8446305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:8450429-8450610:1:exon

position:8450429:1
position: 8450429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8450610:1
position: 8450610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:8452160-8452255:1:exon

position:8452160:1
position: 8452160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8452255:1
position: 8452255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:8456905-8457044:1:exon

position:8456905:1
position: 8456905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8457044:1
position: 8457044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:8460290-8460445:1:exon

position:8460290:1
position: 8460290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmprss15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmprss15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enteropeptidase
translation: MKSDRKVAAGHHSLSSFEAMLSVLFIILMVLCAGLIAVSWLAIKESETDAALGKSHEVRGTFKITSGVTYNPNLQDRLSADFKVLAFDLQQMIDQIFESSNLKNEYKKSSVFQFENGSVIVLFDLFFAQWVSDENVKEELIQGIEANTSSQLVTFRIDLNSIDITASLGDFSTAFPVTTSGMPSTYGGQKRVLPLTTSASLGNFSTAIATTTLGHVPVECQPDSRPCANTWNCIATDLFCDGEVNCPDGSDEDTKLCATACDGRFLLTENSGSFQADRYPGSDSSGVVCRWIISVNQGLSIQISFGSFIAHYTDVLDIYEGIGPSKILRASFVETDPGTVRIFSNLVTVAFLVESDESDYIGFNATYGTFNSNDLSNDEKINCTFEDGFCFWVQDLDDDNEWARIRGPQFPLFTGPSFDHTFGNDSGFYISTPTEQCWRRERVGLLSLSLALASEPACLHFWYYMCCENVYNLSIQISSDESTDKTVFQRTGNYGRNWNYGQVTFNETGKFKVVFNAFRNPGFSTIGLDDINLTNGICSESPYPEPTLVPTPPPELPTDCGGPFELWEPNTTFSSPNFPDIYPNQAFCVWNLNAQKGKNIQLHFQEFELESINDVVEVRDGGEIDSLLLAVYTGPGPVKDVFSTTNRMTVLFITSTMTASRGFKANFTTGYYLGIPEPCQDEEFPCKDGKCIPMGNLCDGHTHCADGSDEEDCVRFLNGTMNNNGLVQFKIHSVWHVTCAENWTAQISNEVCQLLGQGSVNSSMTTFSDGNGPFVSLNQAPNGSLTLTPSLQCSQNLLIMLHCNHKSCGEKMVALNVNPKIVGGSDAEAGAWPWLVALYYRDSYRDQLLCGASLVSSEWLVSAAHCVYGRNVDPTRWTAVLGLHMQSNLTSPQVERRVIDQIVISPHYDRRRKFNDIVMMHLEFKVNYTDYIQPICLPEENQIFSPGRICSIAGWGATENGGSTVNVQQEADVPLVSNEKCQQQLPEYNITGNMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLVGVTSFGVKCALPNRPGVYVRVSEFVEWIQGFLH
SIO_010081: Tmprss15
subclass of: SO_0000673
so part of: Tmprss15
location: join(8353141..8353285,8356083..8356213,8356451..8356518,8365308..8365459,8369045..8369089,8369604..8369640,8369734..8369750,8370045..8370093,8377360..8377487,8381490..8381598,8385433..8385539,8392127..8392267,8392914..8393063,8403720..8403825,8404124..8404274,8406886..8407021,8413244..8413333,8415510..8415635,8417364..8417504,8429124..8429234,8430996..8431128,8442482..8442577,8445934..8445983,8446119..8446305,8450429..8450610,8452160..8452255,8456905..8457044,8460290..8460445)
location: region:8353141-8460445:1
so has part: feature:8353141-8353285:1:exon
so has part: feature:8356083-8356213:1:exon
so has part: feature:8356451-8356518:1:exon
so has part: feature:8365308-8365459:1:exon
so has part: feature:8369045-8369089:1:exon
so has part: feature:8369604-8369640:1:exon
so has part: feature:8369734-8369750:1:exon
so has part: feature:8370045-8370093:1:exon
so has part: feature:8377360-8377487:1:exon
so has part: feature:8381490-8381598:1:exon
so has part: feature:8385433-8385539:1:exon
so has part: feature:8392127-8392267:1:exon
so has part: feature:8392914-8393063:1:exon
so has part: feature:8403720-8403825:1:exon
so has part: feature:8404124-8404274:1:exon
so has part: feature:8406886-8407021:1:exon
so has part: feature:8413244-8413333:1:exon
so has part: feature:8415510-8415635:1:exon
so has part: feature:8417364-8417504:1:exon
so has part: feature:8429124-8429234:1:exon
so has part: feature:8430996-8431128:1:exon
so has part: feature:8442482-8442577:1:exon
so has part: feature:8445934-8445983:1:exon
so has part: feature:8446119-8446305:1:exon
so has part: feature:8450429-8450610:1:exon
so has part: feature:8452160-8452255:1:exon
so has part: feature:8456905-8457044:1:exon
so has part: feature:8460290-8460445:1:exon

XP_005360668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8353141-8353285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8356083-8356213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8356451-8356518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8365308-8365459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8369045-8369089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8369604-8369640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8369734-8369750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8370045-8370093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8377360-8377487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8381490-8381598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8385433-8385539:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8392127-8392267:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8392914-8393063:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8403720-8403825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8404124-8404274:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8406886-8407021:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8413244-8413333:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8415510-8415635:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8417364-8417504:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8429124-8429234:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8430996-8431128:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8442482-8442577:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8445934-8445983:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8446119-8446305:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8450429-8450610:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8452160-8452255:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8456905-8457044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8460290-8460445:1:exon

LOC102001204
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102001204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8382513..8383849
location: region:8382513-8383849:1
so has part: feature:8382513-8383849:1:exon

102001204
type: Gene
SIO_000068: ncbigene

position:8382513:1
position: 8382513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8383849:1
position: 8383849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8382513-8383849:1:exon

LOC102001204
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102001204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC102001204
subclass of: SO_0000673
so part of: LOC102001204
location: 8382513..8383377
location: region:8382513-8383377:1
so has part: feature:8382513-8383377:1:exon

position:8383377:1
position: 8383377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8382513-8383377:1:exon

LOC102001204
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102001204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC102001204
subclass of: SO_0000673
so part of: LOC102001204
location: 8383812..8383849
location: region:8383812-8383849:1
so has part: feature:8383812-8383849:1:exon

position:8383812:1
position: 8383812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8383812-8383849:1:exon

Chodl
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Chodl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8462627..8483589)
location: region:8462627-8483589:-1
so has part: feature:8462627-8483589:-1:exon
subclass of: SO_0000010

101983631
type: Gene
SIO_000068: ncbigene

position:8462627:-1
position: 8462627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8483589:-1
position: 8483589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8462627-8483589:-1:exon

Chodl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Chodl
product: chondrolectin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005360543.2
SIO_010081: Chodl
subclass of: SO_0000673
so part of: Chodl
location: complement(join(8462627..8463998,8467192..8467294,8469344..8469430,8472998..8473155,8473286..8473595,8483195..8483589))
location: region:8462627-8483589:-1
so has part: feature:8483195-8483589:-1:exon
so has part: feature:8473286-8473595:-1:exon
so has part: feature:8472998-8473155:-1:exon
so has part: feature:8469344-8469430:-1:exon
so has part: feature:8467192-8467294:-1:exon
so has part: feature:8462627-8463998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8483195-8483589:-1:exon

position:8483195:-1
position: 8483195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8473286-8473595:-1:exon

position:8473286:-1
position: 8473286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8473595:-1
position: 8473595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8472998-8473155:-1:exon

position:8472998:-1
position: 8472998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8473155:-1
position: 8473155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8469344-8469430:-1:exon

position:8469344:-1
position: 8469344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8469430:-1
position: 8469430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8467192-8467294:-1:exon

position:8467192:-1
position: 8467192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8467294:-1
position: 8467294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8462627-8463998:-1:exon

position:8463998:-1
position: 8463998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Chodl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Chodl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondrolectin
translation: MIRIVSLLLGVALLCGHGAFARRVVSGQKVCFADVKHPCYKMAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLLRSGDGQNSGACPDLYQWSDGSSSQFRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEIQPTDPVEKPNLTNQPEDKHENVVVTEAGIIPNLIYVIIPTIPLLLLILVAFGTCCFQMLHKSKGRTKTSPNQSTLWISKSTRKESGMEV
SIO_010081: Chodl
subclass of: SO_0000673
so part of: Chodl
location: complement(join(8463914..8463998,8467192..8467294,8469344..8469430,8472998..8473155,8473286..8473595,8483195..8483273))
location: region:8463914-8483273:-1
so has part: feature:8483195-8483273:-1:exon
so has part: feature:8473286-8473595:-1:exon
so has part: feature:8472998-8473155:-1:exon
so has part: feature:8469344-8469430:-1:exon
so has part: feature:8467192-8467294:-1:exon
so has part: feature:8463914-8463998:-1:exon

XP_005360600.1
type: Protein
SIO_000068: ncbiprotein

position:8463914:-1
position: 8463914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8483273:-1
position: 8483273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8483195-8483273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8473286-8473595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8472998-8473155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8469344-8469430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8467192-8467294:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8463914-8463998:-1:exon

LG3H21orf91
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LG3H21orf91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8847935..8870750
location: region:8847935-8870750:1
so has part: feature:8847935-8870750:1:exon
subclass of: SO_0000010

101984114
type: Gene
SIO_000068: ncbigene

position:8847935:1
position: 8847935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8870750:1
position: 8870750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8847935-8870750:1:exon

LG3H21orf91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LG3H21orf91
product: linkage group 3 C21orf91 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013351282.2
SIO_010081: LG3H21orf91
subclass of: SO_0000673
so part of: LG3H21orf91
location: join(8847935..8848176,8848546..8848679,8866684..8867199,8868214..8868276,8869585..8870750)
location: region:8847935-8870750:1
so has part: feature:8847935-8848176:1:exon
so has part: feature:8848546-8848679:1:exon
so has part: feature:8866684-8867199:1:exon
so has part: feature:8868214-8868276:1:exon
so has part: feature:8869585-8870750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8847935-8848176:1:exon

position:8848176:1
position: 8848176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8848546-8848679:1:exon

position:8848546:1
position: 8848546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8848679:1
position: 8848679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8866684-8867199:1:exon

position:8866684:1
position: 8866684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8867199:1
position: 8867199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8868214-8868276:1:exon

position:8868214:1
position: 8868214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8868276:1
position: 8868276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8869585-8870750:1:exon

position:8869585:1
position: 8869585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LG3H21orf91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LG3H21orf91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EURL homolog
translation: MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTKSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTILSKKINWIIQYAQNKDMDLDPECSKTTQHHLFNFRHKPDKKLLPQFDSQVPKYSARGLAGHAGGISSYTQRILEHRESTDFGLAILQDSDVRWHPKHNQAQKKEEISSGPEANVQSQNPHYSREELNSMTLGEVEQLNTKLQQQIQEVFEELSQQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGTRSHLSMNN
SIO_010081: LG3H21orf91
subclass of: SO_0000673
so part of: LG3H21orf91
location: join(8848553..8848679,8866684..8867199,8868214..8868276,8869585..8869751)
location: region:8848553-8869751:1
so has part: feature:8848553-8848679:1:exon
so has part: feature:8866684-8867199:1:exon
so has part: feature:8868214-8868276:1:exon
so has part: feature:8869585-8869751:1:exon

XP_013206736.1
type: Protein
SIO_000068: ncbiprotein

position:8848553:1
position: 8848553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8869751:1
position: 8869751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8848553-8848679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8866684-8867199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8868214-8868276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8869585-8869751:1:exon

Btg3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Btg3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9012620..9027660
location: region:9012620-9027660:1
so has part: feature:9012620-9027660:1:exon
subclass of: SO_0000010

101984395
type: Gene
SIO_000068: ncbigene

position:9012620:1
position: 9012620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9027660:1
position: 9027660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9012620-9027660:1:exon

Btg3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Btg3
product: BTG anti-proliferation factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005360546.2
SIO_010081: Btg3
subclass of: SO_0000673
so part of: Btg3
location: join(9012620..9012824,9015991..9016169,9020007..9020144,9022777..9022984,9026981..9027660)
location: region:9012620-9027660:1
so has part: feature:9012620-9012824:1:exon
so has part: feature:9015991-9016169:1:exon
so has part: feature:9020007-9020144:1:exon
so has part: feature:9022777-9022984:1:exon
so has part: feature:9026981-9027660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9012620-9012824:1:exon

position:9012824:1
position: 9012824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9015991-9016169:1:exon

position:9015991:1
position: 9015991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9016169:1
position: 9016169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9020007-9020144:1:exon

position:9020007:1
position: 9020007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9020144:1
position: 9020144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9022777-9022984:1:exon

position:9022777:1
position: 9022777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9022984:1
position: 9022984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9026981-9027660:1:exon

position:9026981:1
position: 9026981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Btg3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Btg3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BTG3
translation: MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTQILQEKYKNHWYPEKPSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLGLPKELTLWVDPCEVCCRYGEKNNAFIVASFENEDENKDEISKKVSRALDKVTSDYHSGSSSSDEETSKEVEVKPSSVTATPSPVYQISELIFPPLPVWHPLPRKKPGMYRGNGHQSHYPPPVPFGYPNPGRKNKPYRPIPVTWVPPPGMHCDRNHWINPHMLAPH
SIO_010081: Btg3
subclass of: SO_0000673
so part of: Btg3
location: join(9015997..9016169,9020007..9020144,9022777..9022984,9026981..9027220)
location: region:9015997-9027220:1
so has part: feature:9015997-9016169:1:exon
so has part: feature:9020007-9020144:1:exon
so has part: feature:9022777-9022984:1:exon
so has part: feature:9026981-9027220:1:exon

XP_005360603.1
type: Protein
SIO_000068: ncbiprotein

position:9015997:1
position: 9015997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9027220:1
position: 9027220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9015997-9016169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9020007-9020144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9022777-9022984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9026981-9027220:1:exon

Cxadr
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9027715..9082650)
location: region:9027715-9082650:-1
so has part: feature:9027715-9082650:-1:exon
subclass of: SO_0000010

101984677
type: Gene
SIO_000068: ncbigene

position:9027715:-1
position: 9027715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9082650:-1
position: 9082650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9027715-9082650:-1:exon

Cxadr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cxadr
product: CXADR, Ig-like cell adhesion molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005360548.3
SIO_010081: Cxadr
subclass of: SO_0000673
so part of: Cxadr
location: complement(join(9027715..9028258,9043462..9043645,9044687..9044825,9045322..9045444,9046143..9046298,9049959..9050163,9053805..9053971,9082461..9082650))
location: region:9027715-9082650:-1
so has part: feature:9082461-9082650:-1:exon
so has part: feature:9053805-9053971:-1:exon
so has part: feature:9049959-9050163:-1:exon
so has part: feature:9046143-9046298:-1:exon
so has part: feature:9045322-9045444:-1:exon
so has part: feature:9044687-9044825:-1:exon
so has part: feature:9043462-9043645:-1:exon
so has part: feature:9027715-9028258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9082461-9082650:-1:exon

position:9082461:-1
position: 9082461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9053805-9053971:-1:exon

position:9053805:-1
position: 9053805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9053971:-1
position: 9053971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9049959-9050163:-1:exon

position:9049959:-1
position: 9049959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9050163:-1
position: 9050163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9046143-9046298:-1:exon

position:9046143:-1
position: 9046143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9046298:-1
position: 9046298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9045322-9045444:-1:exon

position:9045322:-1
position: 9045322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9045444:-1
position: 9045444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9044687-9044825:-1:exon

position:9044687:-1
position: 9044687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9044825:-1
position: 9044825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9043462-9043645:-1:exon

position:9043462:-1
position: 9043462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9043645:-1
position: 9043645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9027715-9028258:-1:exon

position:9028258:-1
position: 9028258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cxadr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform X2
translation: MALLLCFVLLYGVADVTRGLSITTPEQSIDKAKGETAYLPCKFTLGPDDHGPLDIEWLISPSDNQKVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVTSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKVLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLRYEWQKLSDTQRMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPSNRAGTIAGAIIGTLLALVFIGAILFCCHRKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERAPQSPTLAPAKFTYTTDGITVV
SIO_010081: Cxadr
subclass of: SO_0000673
so part of: Cxadr
location: complement(join(9028223..9028258,9043462..9043645,9044687..9044825,9045322..9045444,9046143..9046298,9049959..9050163,9053805..9053971,9082461..9082503))
location: region:9028223-9082503:-1
so has part: feature:9082461-9082503:-1:exon
so has part: feature:9053805-9053971:-1:exon
so has part: feature:9049959-9050163:-1:exon
so has part: feature:9046143-9046298:-1:exon
so has part: feature:9045322-9045444:-1:exon
so has part: feature:9044687-9044825:-1:exon
so has part: feature:9043462-9043645:-1:exon
so has part: feature:9028223-9028258:-1:exon

XP_005360605.1
type: Protein
SIO_000068: ncbiprotein

position:9028223:-1
position: 9028223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9082503:-1
position: 9082503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9082461-9082503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9053805-9053971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9049959-9050163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9046143-9046298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9045322-9045444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9044687-9044825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9043462-9043645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9028223-9028258:-1:exon

Cxadr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cxadr
product: CXADR, Ig-like cell adhesion molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005360547.3
SIO_010081: Cxadr
subclass of: SO_0000673
so part of: Cxadr
location: complement(join(9039334..9043645,9044687..9044825,9045322..9045444,9046143..9046298,9049959..9050163,9053805..9053971,9082461..9082650))
location: region:9039334-9082650:-1
so has part: feature:9082461-9082650:-1:exon
so has part: feature:9053805-9053971:-1:exon
so has part: feature:9049959-9050163:-1:exon
so has part: feature:9046143-9046298:-1:exon
so has part: feature:9045322-9045444:-1:exon
so has part: feature:9044687-9044825:-1:exon
so has part: feature:9039334-9043645:-1:exon

position:9039334:-1
position: 9039334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9082461-9082650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9053805-9053971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9049959-9050163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9046143-9046298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9045322-9045444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9044687-9044825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9039334-9043645:-1:exon

Cxadr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform X1
translation: MALLLCFVLLYGVADVTRGLSITTPEQSIDKAKGETAYLPCKFTLGPDDHGPLDIEWLISPSDNQKVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVTSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKVLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLRYEWQKLSDTQRMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPSNRAGTIAGAIIGTLLALVFIGAILFCCHRKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERAPQSPTLAPAKVAAPNLSRMGAVPVMIPAQSKDGSIV
SIO_010081: Cxadr
subclass of: SO_0000673
so part of: Cxadr
location: complement(join(9043381..9043645,9044687..9044825,9045322..9045444,9046143..9046298,9049959..9050163,9053805..9053971,9082461..9082503))
location: region:9043381-9082503:-1
so has part: feature:9082461-9082503:-1:exon
so has part: feature:9053805-9053971:-1:exon
so has part: feature:9049959-9050163:-1:exon
so has part: feature:9046143-9046298:-1:exon
so has part: feature:9045322-9045444:-1:exon
so has part: feature:9044687-9044825:-1:exon
so has part: feature:9043381-9043645:-1:exon

XP_005360604.1
type: Protein
SIO_000068: ncbiprotein

position:9043381:-1
position: 9043381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9082461-9082503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9053805-9053971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9049959-9050163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9046143-9046298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9045322-9045444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9044687-9044825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9043381-9043645:-1:exon

LOC106144140
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9054434..9057020)
location: region:9054434-9057020:-1
so has part: feature:9054434-9057020:-1:exon

106144140
type: Gene
SIO_000068: ncbigene

position:9054434:-1
position: 9054434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9057020:-1
position: 9057020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9054434-9057020:-1:exon

LOC106144140
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144140
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106144140
subclass of: SO_0000673
so part of: LOC106144140
location: complement(9054434..9055271)
location: region:9054434-9055271:-1
so has part: feature:9054434-9055271:-1:exon

position:9055271:-1
position: 9055271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9054434-9055271:-1:exon

LOC106144140
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144140
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106144140
subclass of: SO_0000673
so part of: LOC106144140
location: complement(9056966..9057020)
location: region:9056966-9057020:-1
so has part: feature:9056966-9057020:-1:exon

position:9056966:-1
position: 9056966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9056966-9057020:-1:exon

LOC101985354
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101985354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9273004..9273435
location: region:9273004-9273435:1
so has part: feature:9273004-9273435:1:exon

101985354
type: Gene
SIO_000068: ncbigene

position:9273004:1
position: 9273004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9273435:1
position: 9273435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9273004-9273435:1:exon

LOC101985354
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101985354
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101985354
subclass of: SO_0000673
so part of: LOC101985354
location: 9273004..9273435
location: region:9273004-9273435:1
so has part: feature:9273004-9273435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9273004-9273435:1:exon

LOC101979029
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9313623..9314385
location: region:9313623-9314385:1
so has part: feature:9313623-9314385:1:exon

101979029
type: Gene
SIO_000068: ncbigene

position:9313623:1
position: 9313623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9314385:1
position: 9314385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9313623-9314385:1:exon

LOC101979029
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101979029
subclass of: SO_0000673
so part of: LOC101979029
location: 9313623..9314385
location: region:9313623-9314385:1
so has part: feature:9313623-9314385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9313623-9314385:1:exon

LOC101979317
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9535886..10371826)
location: region:9535886-10371826:-1
so has part: feature:9535886-10371826:-1:exon
subclass of: SO_0000010

101979317
type: Gene
SIO_000068: ncbigene

position:9535886:-1
position: 9535886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10371826:-1
position: 10371826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9535886-10371826:-1:exon

LOC101979317
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101979317
product: glutamate receptor ionotropic, delta-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005360612.3
SIO_010081: LOC101979317
subclass of: SO_0000673
so part of: LOC101979317
location: complement(join(9535886..9536026,9553064..9553225,9560097..9560270,9569360..9569413,9696676..9696881,9715033..9715317,10113269..10113424,10370927..10371826))
location: region:9535886-10371826:-1
so has part: feature:10370927-10371826:-1:exon
so has part: feature:10113269-10113424:-1:exon
so has part: feature:9715033-9715317:-1:exon
so has part: feature:9696676-9696881:-1:exon
so has part: feature:9569360-9569413:-1:exon
so has part: feature:9560097-9560270:-1:exon
so has part: feature:9553064-9553225:-1:exon
so has part: feature:9535886-9536026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10370927-10371826:-1:exon

position:10370927:-1
position: 10370927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10113269-10113424:-1:exon

position:10113269:-1
position: 10113269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10113424:-1
position: 10113424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9715033-9715317:-1:exon

position:9715033:-1
position: 9715033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9715317:-1
position: 9715317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9696676-9696881:-1:exon

position:9696676:-1
position: 9696676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9696881:-1
position: 9696881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9569360-9569413:-1:exon

position:9569360:-1
position: 9569360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9569413:-1
position: 9569413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9560097-9560270:-1:exon

position:9560097:-1
position: 9560097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9560270:-1
position: 9560270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9553064-9553225:-1:exon

position:9553064:-1
position: 9553064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9553225:-1
position: 9553225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9535886-9536026:-1:exon

position:9536026:-1
position: 9536026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101979317
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101979317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, delta-2
translation: MEVFPLLLFLSLWWSRTWDLATADSIIHIGAIFDESATKDDEVFRTAVADLNQNEEILQTEKITFSVTFVDGNNPFQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHIPHLFIQRSTAGTPRSGCGLTRSNRNDDYTLSVRPPVYLNEVILRVVTEYAWQKFIIFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTGDLEFGETGGNPNVHFEILGTNYGEELGRGVRKVSLNLL
SIO_010081: LOC101979317
subclass of: SO_0000673
so part of: LOC101979317
location: complement(join(9535886..9536026,9553064..9553225,9560097..9560270,9569360..9569413,9696676..9696881,9715033..9715317,10113269..10113424,10370927..10371014))
location: region:9535886-10371014:-1
so has part: feature:10370927-10371014:-1:exon
so has part: feature:10113269-10113424:-1:exon
so has part: feature:9715033-9715317:-1:exon
so has part: feature:9696676-9696881:-1:exon
so has part: feature:9569360-9569413:-1:exon
so has part: feature:9560097-9560270:-1:exon
so has part: feature:9553064-9553225:-1:exon
so has part: feature:9535886-9536026:-1:exon

XP_005360669.1
type: Protein
SIO_000068: ncbiprotein

position:10371014:-1
position: 10371014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10370927-10371014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10113269-10113424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9715033-9715317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9696676-9696881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9569360-9569413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9560097-9560270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9553064-9553225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9535886-9536026:-1:exon

LOC113457615
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10372429..10382254
location: region:10372429-10382254:1
so has part: feature:10372429-10382254:1:exon
subclass of: SO_0000011

113457615
type: Gene
SIO_000068: ncbigene

position:10372429:1
position: 10372429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10382254:1
position: 10382254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10372429-10382254:1:exon

LOC113457615
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457615
product: uncharacterized LOC113457615
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003378149.1
SIO_010081: LOC113457615
subclass of: SO_0000673
so part of: LOC113457615
location: join(10372429..10373622,10373914..10374249,10374339..10374439,10380240..10380348,10382075..10382254)
location: region:10372429-10382254:1
so has part: feature:10372429-10373622:1:exon
so has part: feature:10373914-10374249:1:exon
so has part: feature:10374339-10374439:1:exon
so has part: feature:10380240-10380348:1:exon
so has part: feature:10382075-10382254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10372429-10373622:1:exon

position:10373622:1
position: 10373622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10373914-10374249:1:exon

position:10373914:1
position: 10373914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10374249:1
position: 10374249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10374339-10374439:1:exon

position:10374339:1
position: 10374339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10374439:1
position: 10374439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10380240-10380348:1:exon

position:10380240:1
position: 10380240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10380348:1
position: 10380348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10382075-10382254:1:exon

position:10382075:1
position: 10382075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101979599
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10569648..10570311
location: region:10569648-10570311:1
so has part: feature:10569648-10570311:1:exon

101979599
type: Gene
SIO_000068: ncbigene

position:10569648:1
position: 10569648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10570311:1
position: 10570311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10569648-10570311:1:exon

LOC101979599
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979599
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101979599
subclass of: SO_0000673
so part of: LOC101979599
location: 10569648..10570311
location: region:10569648-10570311:1
so has part: feature:10569648-10570311:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10569648-10570311:1:exon

Ccser1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ccser1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11085321..12034764)
location: region:11085321-12034764:-1
so has part: feature:11085321-12034764:-1:exon
subclass of: SO_0000010

106143730
type: Gene
SIO_000068: ncbigene

position:11085321:-1
position: 11085321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12034764:-1
position: 12034764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11085321-12034764:-1:exon

Ccser1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ccser1
product: coiled-coil serine rich protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013351266.2
SIO_010081: Ccser1
subclass of: SO_0000673
so part of: Ccser1
location: complement(join(11085321..11086557,11450286..11450330,11596384..11596461,11671649..11671732,11737937..11738011,11817930..11818137,11935850..11935970,11966386..11966479,12032096..12032277,12033426..12034764))
location: region:11085321-12034764:-1
so has part: feature:12033426-12034764:-1:exon
so has part: feature:12032096-12032277:-1:exon
so has part: feature:11966386-11966479:-1:exon
so has part: feature:11935850-11935970:-1:exon
so has part: feature:11817930-11818137:-1:exon
so has part: feature:11737937-11738011:-1:exon
so has part: feature:11671649-11671732:-1:exon
so has part: feature:11596384-11596461:-1:exon
so has part: feature:11450286-11450330:-1:exon
so has part: feature:11085321-11086557:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12033426-12034764:-1:exon

position:12033426:-1
position: 12033426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12032096-12032277:-1:exon

position:12032096:-1
position: 12032096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12032277:-1
position: 12032277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11966386-11966479:-1:exon

position:11966386:-1
position: 11966386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11966479:-1
position: 11966479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11935850-11935970:-1:exon

position:11935850:-1
position: 11935850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11935970:-1
position: 11935970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11817930-11818137:-1:exon

position:11817930:-1
position: 11817930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11818137:-1
position: 11818137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11737937-11738011:-1:exon

position:11737937:-1
position: 11737937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11738011:-1
position: 11738011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11671649-11671732:-1:exon

position:11671649:-1
position: 11671649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11671732:-1
position: 11671732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11596384-11596461:-1:exon

position:11596384:-1
position: 11596384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11596461:-1
position: 11596461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11450286-11450330:-1:exon

position:11450286:-1
position: 11450286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11450330:-1
position: 11450330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11085321-11086557:-1:exon

position:11086557:-1
position: 11086557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ccser1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ccser1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine-rich coiled-coil domain-containing protein 1
translation: MGDSGSRRCTLVSRLPIFRKSISRRHDSLPSSPSSGNTAGVHSSSPSSTNSSSGSVGKRRSIFRAPSISFHHKKGSEPKPEPTEQNLSISNGAQPSHSNIQKLSLEEQVKTRGRHSVGFSSSRSKKITRSLTEDFEREKEPSTNKNVFINCLSSGRSEGDDSGFTEEQTRRSLKQSTKKLLPKSFSSHSKFSKSVPQSQSRPLVQQPEFSLAIAQYQERTLEVGRPSPSCSVDVTEHAGSSLQSPLLSTDLTTAQTPSEFLALTEDSLSEADAFPKSGSMASHCDNFGHNDATSQPTPNLTTITKTTMEFVGTVPCMMMSPGRYRLDGRCGSELRSLPETSAANQREVLPQGTGSPLRNVSDTETHLPHGHQREEKPTEPMLRTSSPRTLGSYDPHKALAERIKGVHPISDSRVIPSSGDHHVFNKTSYGYEASAAKVLASSLSPYHEGRYIERRLRSSSEGTAGSGRMVSKPKDGHAEASSLRKHRAGSSSSKMNSLDVLNHLGSCELDEDDLMLDLEFLEEQNLQPPVCREDSCHSVMSCAAVLLSPVEQTRDMKKLEEPKCPEPSKQSLSLKITKDVDQEARCSHVSRMPTSPSADCPLLGVEENGGVDSLPFRLMLQECTAVKTLLLKMKRVLQESDVSPSSSTTSLPISPLTEDPLPLKEITKDECSMLKLQLKDRDELISQLQAELEKVQHLQKAFASRVDKSTQTELLGCDGLSLKRLEAIQGGRESTYRNRTMSQSLSTRDRKAIHTPTEDRFRYSTADQTTSPYKNICQLPGLCLSNFLKDKELGGVMKQSRGTYEAITSEVPQNSRTAVGPSLLKPATKTEGLSMFSEKPKDPGALSRQHSTFTGRFGQPPRGPISLHTYSRKNVFLHHNLHTAELQTLSQQDG
SIO_010081: Ccser1
subclass of: SO_0000673
so part of: Ccser1
location: complement(join(11086072..11086557,11450286..11450330,11596384..11596461,11671649..11671732,11737937..11738011,11817930..11818137,11935850..11935970,11966386..11966479,12032096..12032277,12033426..12034737))
location: region:11086072-12034737:-1
so has part: feature:12033426-12034737:-1:exon
so has part: feature:12032096-12032277:-1:exon
so has part: feature:11966386-11966479:-1:exon
so has part: feature:11935850-11935970:-1:exon
so has part: feature:11817930-11818137:-1:exon
so has part: feature:11737937-11738011:-1:exon
so has part: feature:11671649-11671732:-1:exon
so has part: feature:11596384-11596461:-1:exon
so has part: feature:11450286-11450330:-1:exon
so has part: feature:11086072-11086557:-1:exon

XP_013206720.2
type: Protein
SIO_000068: ncbiprotein

position:11086072:-1
position: 11086072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12034737:-1
position: 12034737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12033426-12034737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12032096-12032277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11966386-11966479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11935850-11935970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11817930-11818137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11737937-11738011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11671649-11671732:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11596384-11596461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11450286-11450330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11086072-11086557:-1:exon

LOC101979884
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12285150..12285837)
location: region:12285150-12285837:-1
so has part: feature:12285150-12285837:-1:exon

101979884
type: Gene
SIO_000068: ncbigene

position:12285150:-1
position: 12285150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12285837:-1
position: 12285837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12285150-12285837:-1:exon

LOC101979884
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101979884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101979884
subclass of: SO_0000673
so part of: LOC101979884
location: complement(12285150..12285837)
location: region:12285150-12285837:-1
so has part: feature:12285150-12285837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12285150-12285837:-1:exon

LOC101980172
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 12286397..12330207
location: region:12286397-12330207:1
so has part: feature:12286397-12330207:1:exon

101980172
type: Gene
SIO_000068: ncbigene

position:12286397:1
position: 12286397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12330207:1
position: 12330207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12286397-12330207:1:exon

LOC101980172
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101980172
subclass of: SO_0000673
so part of: LOC101980172
location: 12286397..12286444
location: region:12286397-12286444:1
so has part: feature:12286397-12286444:1:exon

position:12286444:1
position: 12286444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12286397-12286444:1:exon

LOC101980172
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101980172
subclass of: SO_0000673
so part of: LOC101980172
location: 12290312..12290455
location: region:12290312-12290455:1
so has part: feature:12290312-12290455:1:exon

position:12290312:1
position: 12290312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12290455:1
position: 12290455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12290312-12290455:1:exon

LOC101980172
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101980172
subclass of: SO_0000673
so part of: LOC101980172
location: 12318963..12319574
location: region:12318963-12319574:1
so has part: feature:12318963-12319574:1:exon

position:12318963:1
position: 12318963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12319574:1
position: 12319574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12318963-12319574:1:exon

LOC101980172
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101980172
subclass of: SO_0000673
so part of: LOC101980172
location: 12329423..12329469
location: region:12329423-12329469:1
so has part: feature:12329423-12329469:1:exon

position:12329423:1
position: 12329423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12329469:1
position: 12329469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12329423-12329469:1:exon

LOC101980172
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101980172
subclass of: SO_0000673
so part of: LOC101980172
location: 12329853..12330207
location: region:12329853-12330207:1
so has part: feature:12329853-12330207:1:exon

position:12329853:1
position: 12329853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12329853-12330207:1:exon

Mmrn1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mmrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12358046..12401469)
location: region:12358046-12401469:-1
so has part: feature:12358046-12401469:-1:exon
subclass of: SO_0000010

101986108
type: Gene
SIO_000068: ncbigene

position:12358046:-1
position: 12358046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12401469:-1
position: 12401469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12358046-12401469:-1:exon

Mmrn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mmrn1
product: multimerin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360553.2
SIO_010081: Mmrn1
subclass of: SO_0000673
so part of: Mmrn1
location: complement(join(12358046..12358833,12359753..12359902,12371718..12373676,12376352..12376525,12378084..12378197,12390215..12390321,12392631..12392750,12400901..12401469))
location: region:12358046-12401469:-1
so has part: feature:12400901-12401469:-1:exon
so has part: feature:12392631-12392750:-1:exon
so has part: feature:12390215-12390321:-1:exon
so has part: feature:12378084-12378197:-1:exon
so has part: feature:12376352-12376525:-1:exon
so has part: feature:12371718-12373676:-1:exon
so has part: feature:12359753-12359902:-1:exon
so has part: feature:12358046-12358833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12400901-12401469:-1:exon

position:12400901:-1
position: 12400901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12392631-12392750:-1:exon

position:12392631:-1
position: 12392631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12392750:-1
position: 12392750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12390215-12390321:-1:exon

position:12390215:-1
position: 12390215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12390321:-1
position: 12390321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12378084-12378197:-1:exon

position:12378084:-1
position: 12378084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12378197:-1
position: 12378197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12376352-12376525:-1:exon

position:12376352:-1
position: 12376352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12376525:-1
position: 12376525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12371718-12373676:-1:exon

position:12371718:-1
position: 12371718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12373676:-1
position: 12373676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12359753-12359902:-1:exon

position:12359753:-1
position: 12359753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12359902:-1
position: 12359902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12358046-12358833:-1:exon

position:12358833:-1
position: 12358833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mmrn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mmrn1
product: multimerin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360552.2
SIO_010081: Mmrn1
subclass of: SO_0000673
so part of: Mmrn1
location: complement(join(12358046..12358833,12359753..12359905,12371718..12373676,12376352..12376525,12378084..12378197,12390215..12390321,12392631..12392750,12400901..12401469))
location: region:12358046-12401469:-1
so has part: feature:12400901-12401469:-1:exon
so has part: feature:12392631-12392750:-1:exon
so has part: feature:12390215-12390321:-1:exon
so has part: feature:12378084-12378197:-1:exon
so has part: feature:12376352-12376525:-1:exon
so has part: feature:12371718-12373676:-1:exon
so has part: feature:12359753-12359905:-1:exon
so has part: feature:12358046-12358833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12400901-12401469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12392631-12392750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12390215-12390321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12378084-12378197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12376352-12376525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12371718-12373676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12359753-12359905:-1:exon

position:12359905:-1
position: 12359905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12358046-12358833:-1:exon

Mmrn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mmrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multimerin-1 isoform X2
translation: MKGPKLFVLLSSLWGGVLGLTNTLRSSIAPEEENFPLPLNSTSAPQREVLSLQVLSATQNPSSQADATPKRPSEDTLLLSTVQTSETSTSAEGRSQTPTPLEKTEAVMAPLPLALQSKAGPGAGMVELANATLNFLQSFSRKPNQQAISPKSSGDMGNRSPRETHLSGSSSSRSQRPSYQKSSFETTREKNWCAYVHTKLSPTVILDTHSSYTPNGRGSCGWSNGLCSQRSQKTSNAVYRMQHKIVTSLEWRCCPGYIGPNCQLKAEEQQQLAHSNQAESHTAVDHRRAEQTQQQQKQDYGDPAVIQKMAEEMSQQAMKLTFLQKKVDNVSLATEDMRNAYLSLEGKISEDKGKEFQPILKALKSKSIDDLLRNIVKEQFKAFQDDMQETIAKLFKTVSSLSEDLESTRQAVLQVNASLVSVTAQQKLLLTQENQPTWKDITDLKNNITNVRQEMALTCEKPLKELEAKQAHLEGAIGQEHSELVLYQQTLNETLSKIQEANTQLLSVQQASGMENLVSEESSSSNVTKYLSVLHETASKQGLMLLQMLSDLHVQESKISNLTILLEMEKESVRGECEEMVSKCRHEFKYQLKDTEENLHVLNQTLSEVIFPMDNKVDKISEQLNDLTYDMEILQPLLEQRSPIRQPVIREPKEAPVTRRELQNLIAAINRLNVLTKELTKRHNLLRNEVQSRDEFLERRIGDHVLETEDGLNMTMTVINNAIDFVQDNYVLKGSLSARSDNPKVCECNQNVESILSFISEFQRLNDSIQTLVNDNQKYSFVLQIAKALTVLPKDEKLSHLNFQKVYQMFNETSSQVKKCQENMSNLEENVLSARKTAKEFETRLQGVESKVTKTLIPYYISFKKGGVLSNEKDTDLQLKVLNSRFKALEAKSIYLSVNFSLLNKTVHELLMTCHNASASTFGQSAPLPVWTEGPLRDSLTKLVESIVKIKTQAALSNLTWSVDRLVSDGLANIAKPQKQVKLQKKPNALKKSVNVTTILIGRTQRNTDSIPHPAHERSSCSSFPCQNGGTCISGPASFICACRHPFTGDTCTVKTAEENALAPDFSKGSYRYAPMVAFFVSHTHGMTTPGPILFNDLSVNYGASYNPRTGKFRIPYLGVYIFKYTIESFSAHISGFLVVDGVDKLRFESENPDNEIHCDRVLTGDALFELNYGQEVWMRLVKGAIPIKYPPATTFSGFLLYRT
SIO_010081: Mmrn1
subclass of: SO_0000673
so part of: Mmrn1
location: complement(join(12358412..12358833,12359753..12359902,12371718..12373676,12376352..12376525,12378084..12378197,12390215..12390321,12392631..12392750,12400901..12401469))
location: region:12358412-12401469:-1
so has part: feature:12400901-12401469:-1:exon
so has part: feature:12392631-12392750:-1:exon
so has part: feature:12390215-12390321:-1:exon
so has part: feature:12378084-12378197:-1:exon
so has part: feature:12376352-12376525:-1:exon
so has part: feature:12371718-12373676:-1:exon
so has part: feature:12359753-12359902:-1:exon
so has part: feature:12358412-12358833:-1:exon

XP_005360610.1
type: Protein
SIO_000068: ncbiprotein

position:12358412:-1
position: 12358412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12400901-12401469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12392631-12392750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12390215-12390321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12378084-12378197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12376352-12376525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12371718-12373676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12359753-12359902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12358412-12358833:-1:exon

Mmrn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mmrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multimerin-1 isoform X1
translation: MKGPKLFVLLSSLWGGVLGLTNTLRSSIAPEEENFPLPLNSTSAPQREVLSLQVLSATQNPSSQADATPKRPSEDTLLLSTVQTSETSTSAEGRSQTPTPLEKTEAVMAPLPLALQSKAGPGAGMVELANATLNFLQSFSRKPNQQAISPKSSGDMGNRSPRETHLSGSSSSRSQRPSYQKSSFETTREKNWCAYVHTKLSPTVILDTHSSYTPNGRGSCGWSNGLCSQRSQKTSNAVYRMQHKIVTSLEWRCCPGYIGPNCQLKAEEQQQLAHSNQAESHTAVDHRRAEQTQQQQKQDYGDPAVIQKMAEEMSQQAMKLTFLQKKVDNVSLATEDMRNAYLSLEGKISEDKGKEFQPILKALKSKSIDDLLRNIVKEQFKAFQDDMQETIAKLFKTVSSLSEDLESTRQAVLQVNASLVSVTAQQKLLLTQENQPTWKDITDLKNNITNVRQEMALTCEKPLKELEAKQAHLEGAIGQEHSELVLYQQTLNETLSKIQEANTQLLSVQQASGMENLVSEESSSSNVTKYLSVLHETASKQGLMLLQMLSDLHVQESKISNLTILLEMEKESVRGECEEMVSKCRHEFKYQLKDTEENLHVLNQTLSEVIFPMDNKVDKISEQLNDLTYDMEILQPLLEQRSPIRQPVIREPKEAPVTRRELQNLIAAINRLNVLTKELTKRHNLLRNEVQSRDEFLERRIGDHVLETEDGLNMTMTVINNAIDFVQDNYVLKGSLSARSDNPKVCECNQNVESILSFISEFQRLNDSIQTLVNDNQKYSFVLQIAKALTVLPKDEKLSHLNFQKVYQMFNETSSQVKKCQENMSNLEENVLSARKTAKEFETRLQGVESKVTKTLIPYYISFKKGGVLSNEKDTDLQLKVLNSRFKALEAKSIYLSVNFSLLNKTVHELLMTCHNASASTFGQSAPLPVWTEGPLRDSLTKLVESIVKIKTQAALSNLTWSVDRLVSDGLANIAKPQKQVKLQKKPNALKKSVNVTTILIGRTQRNTDSIPHPGAHERSSCSSFPCQNGGTCISGPASFICACRHPFTGDTCTVKTAEENALAPDFSKGSYRYAPMVAFFVSHTHGMTTPGPILFNDLSVNYGASYNPRTGKFRIPYLGVYIFKYTIESFSAHISGFLVVDGVDKLRFESENPDNEIHCDRVLTGDALFELNYGQEVWMRLVKGAIPIKYPPATTFSGFLLYRT
SIO_010081: Mmrn1
subclass of: SO_0000673
so part of: Mmrn1
location: complement(join(12358412..12358833,12359753..12359905,12371718..12373676,12376352..12376525,12378084..12378197,12390215..12390321,12392631..12392750,12400901..12401469))
location: region:12358412-12401469:-1
so has part: feature:12400901-12401469:-1:exon
so has part: feature:12392631-12392750:-1:exon
so has part: feature:12390215-12390321:-1:exon
so has part: feature:12378084-12378197:-1:exon
so has part: feature:12376352-12376525:-1:exon
so has part: feature:12371718-12373676:-1:exon
so has part: feature:12359753-12359905:-1:exon
so has part: feature:12358412-12358833:-1:exon

XP_005360609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12400901-12401469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12392631-12392750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12390215-12390321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12378084-12378197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12376352-12376525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12371718-12373676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12359753-12359905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12358412-12358833:-1:exon

Snca
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Snca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12498128..12601004
location: region:12498128-12601004:1
so has part: feature:12498128-12601004:1:exon
subclass of: SO_0000010

101986595
type: Gene
SIO_000068: ncbigene

position:12498128:1
position: 12498128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12601004:1
position: 12601004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12498128-12601004:1:exon

Snca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Snca
product: synuclein alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026786036.1
SIO_010081: Snca
subclass of: SO_0000673
so part of: Snca
location: join(12498128..12498252,12500290..12500435,12509705..12509746,12517447..12517589,12599347..12599430,12600422..12601004)
location: region:12498128-12601004:1
so has part: feature:12498128-12498252:1:exon
so has part: feature:12500290-12500435:1:exon
so has part: feature:12509705-12509746:1:exon
so has part: feature:12517447-12517589:1:exon
so has part: feature:12599347-12599430:1:exon
so has part: feature:12600422-12601004:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12498128-12498252:1:exon

position:12498252:1
position: 12498252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12500290-12500435:1:exon

position:12500290:1
position: 12500290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12500435:1
position: 12500435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12509705-12509746:1:exon

position:12509705:1
position: 12509705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12509746:1
position: 12509746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12517447-12517589:1:exon

position:12517447:1
position: 12517447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12517589:1
position: 12517589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12599347-12599430:1:exon

position:12599347:1
position: 12599347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12599430:1
position: 12599430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12600422-12601004:1:exon

position:12600422:1
position: 12600422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Snca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Snca
product: synuclein alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_013351283.2
SIO_010081: Snca
subclass of: SO_0000673
so part of: Snca
location: join(12498827..12499153,12499476..12499559,12500290..12500435,12509705..12509746,12517447..12517589,12599347..12599430,12600422..12601004)
location: region:12498827-12601004:1
so has part: feature:12498827-12499153:1:exon
so has part: feature:12499476-12499559:1:exon
so has part: feature:12500290-12500435:1:exon
so has part: feature:12509705-12509746:1:exon
so has part: feature:12517447-12517589:1:exon
so has part: feature:12599347-12599430:1:exon
so has part: feature:12600422-12601004:1:exon

position:12498827:1
position: 12498827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12498827-12499153:1:exon

position:12499153:1
position: 12499153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12499476-12499559:1:exon

position:12499476:1
position: 12499476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12499559:1
position: 12499559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12500290-12500435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12509705-12509746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12517447-12517589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12599347-12599430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12600422-12601004:1:exon

Snca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Snca
product: synuclein alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005360554.3
SIO_010081: Snca
subclass of: SO_0000673
so part of: Snca
location: join(12498829..12499153,12500290..12500435,12509705..12509746,12517447..12517589,12599347..12599430,12600422..12601004)
location: region:12498829-12601004:1
so has part: feature:12498829-12499153:1:exon
so has part: feature:12500290-12500435:1:exon
so has part: feature:12509705-12509746:1:exon
so has part: feature:12517447-12517589:1:exon
so has part: feature:12599347-12599430:1:exon
so has part: feature:12600422-12601004:1:exon

position:12498829:1
position: 12498829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12498829-12499153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12500290-12500435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12509705-12509746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12517447-12517589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12599347-12599430:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12600422-12601004:1:exon

Snca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Snca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-synuclein
translation: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGNIAAATGFVKKDQMGKGEEGYPQEGILEDMPVDPSSEAYEMPSEEGYQDYEPEA
SIO_010081: Snca
subclass of: SO_0000673
so part of: Snca
location: join(12500315..12500435,12509705..12509746,12517447..12517589,12599347..12599430,12600422..12600454)
location: region:12500315-12600454:1
so has part: feature:12500315-12500435:1:exon
so has part: feature:12509705-12509746:1:exon
so has part: feature:12517447-12517589:1:exon
so has part: feature:12599347-12599430:1:exon
so has part: feature:12600422-12600454:1:exon

XP_026641837.1
type: Protein
SIO_000068: ncbiprotein

position:12500315:1
position: 12500315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12600454:1
position: 12600454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12500315-12500435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12509705-12509746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12517447-12517589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12599347-12599430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12600422-12600454:1:exon

Snca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Snca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-synuclein
translation: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGNIAAATGFVKKDQMGKGEEGYPQEGILEDMPVDPSSEAYEMPSEEGYQDYEPEA
SIO_010081: Snca
subclass of: SO_0000673
so part of: Snca
location: join(12500315..12500435,12509705..12509746,12517447..12517589,12599347..12599430,12600422..12600454)
location: region:12500315-12600454:1
so has part: feature:12500315-12500435:1:exon
so has part: feature:12509705-12509746:1:exon
so has part: feature:12517447-12517589:1:exon
so has part: feature:12599347-12599430:1:exon
so has part: feature:12600422-12600454:1:exon

XP_005360611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12500315-12500435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12509705-12509746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12517447-12517589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12599347-12599430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12600422-12600454:1:exon

Snca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Snca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-synuclein
translation: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGNIAAATGFVKKDQMGKGEEGYPQEGILEDMPVDPSSEAYEMPSEEGYQDYEPEA
SIO_010081: Snca
subclass of: SO_0000673
so part of: Snca
location: join(12500315..12500435,12509705..12509746,12517447..12517589,12599347..12599430,12600422..12600454)
location: region:12500315-12600454:1
so has part: feature:12500315-12500435:1:exon
so has part: feature:12509705-12509746:1:exon
so has part: feature:12517447-12517589:1:exon
so has part: feature:12599347-12599430:1:exon
so has part: feature:12600422-12600454:1:exon

XP_013206737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12500315-12500435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12509705-12509746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12517447-12517589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12599347-12599430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12600422-12600454:1:exon

Gprin3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gprin3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12842948..12908658
location: region:12842948-12908658:1
so has part: feature:12842948-12908658:1:exon
subclass of: SO_0000010

101987518
type: Gene
SIO_000068: ncbigene

position:12842948:1
position: 12842948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12908658:1
position: 12908658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12842948-12908658:1:exon

Gprin3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gprin3
product: GPRIN family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_013351279.2
SIO_010081: Gprin3
subclass of: SO_0000673
so part of: Gprin3
location: join(12842948..12843285,12904170..12908658)
location: region:12842948-12908658:1
so has part: feature:12842948-12843285:1:exon
so has part: feature:12904170-12908658:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12842948-12843285:1:exon

position:12843285:1
position: 12843285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12904170-12908658:1:exon

position:12904170:1
position: 12904170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101987243
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101987243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12882178..12883307)
location: region:12882178-12883307:-1
so has part: feature:12882178-12883307:-1:exon

101987243
type: Gene
SIO_000068: ncbigene

position:12882178:-1
position: 12882178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12883307:-1
position: 12883307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12882178-12883307:-1:exon

LOC101987243
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101987243
subclass of: SO_0000673
so part of: LOC101987243
location: complement(12882178..12883307)
location: region:12882178-12883307:-1
so has part: feature:12882178-12883307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12882178-12883307:-1:exon

Gprin3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gprin3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-regulated inducer of neurite outgrowth 3
translation: MGTVPESLRVTKASIVTTSGKEEGRGELQSVSPQQAEPEKNASGAGSDPAELSIGLGTAAEALMQACVHETTQSDMASPGVLHEVGQVSPTHNTPDDSQLQGSKELAVSGPNPSAEKELRSVHHAIQGDLPNTSSTCVVPENSLGKSKANSNSEKPEKSNCPTRVTCCSSKNQMLCDFPSPENSQGIVQASDPATAAHPSPSTDRSGGEGQKVNSDTTMGSSEPLPRRGCSENKQPSATALDTTGEGSENLPPSSLTSRDSTCCPDEKKVAPLAQLPAASRFKEASTMTCHAEREVKKVPGRAWQDAEVQASVESRSVSTSPSILPAFLKEIPAPEHENGQEQLRVVCHGKGSGGHLLELSNSMVDPQEPRQCPGIVPQVHIQPAAATPAAFKAECKPENQPGEAFKSSLMASSQNQDAEEDGRSSTSKEATSGQPAGTNPGSQKDSPTDQISLLTGSQAGINHGLGNSETRSSEFVVKTTNDHKTQPDRKPPDSRGGAGKDDQLESSNPTDKRGAKDGKPASPLIVKEPTPGTTCSVDAKILLLNPKSQENEGTGPEANLAPSPGRKSQQNTLEEHRQTKTATSLSLPSDGTGDSSPGSGKRTPSRSVKASPRRASRVSEFLKELNVTAAAAQVGLTPGEKKKQMGADSKLHLKQSKRVRDVVWDDQGMTWEVYGASLDPESLGIAIQNHLQRQIRENEKLVKTQSDQTRRSSSSDSSSNKKLKGRQQGVLQSMLQNFRRPNCCVRPAPSSVLD
SIO_010081: Gprin3
subclass of: SO_0000673
so part of: Gprin3
location: 12904278..12906545
location: region:12904278-12906545:1
so has part: feature:12904278-12906545:1:exon

XP_013206733.1
type: Protein
SIO_000068: ncbiprotein

position:12904278:1
position: 12904278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12906545:1
position: 12906545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12904278-12906545:1:exon

LOC101987796
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101987796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12926779..12928370)
location: region:12926779-12928370:-1
so has part: feature:12926779-12928370:-1:exon

101987796
type: Gene
SIO_000068: ncbigene

position:12926779:-1
position: 12926779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12928370:-1
position: 12928370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12926779-12928370:-1:exon

LOC101987796
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987796
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101987796
subclass of: SO_0000673
so part of: LOC101987796
location: complement(12926779..12928370)
location: region:12926779-12928370:-1
so has part: feature:12926779-12928370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12926779-12928370:-1:exon

Tigd2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tigd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13032433..13035474)
location: region:13032433-13035474:-1
so has part: feature:13032433-13035474:-1:exon
subclass of: SO_0000010

101988077
type: Gene
SIO_000068: ncbigene

position:13032433:-1
position: 13032433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13035474:-1
position: 13035474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13032433-13035474:-1:exon

Tigd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tigd2
product: tigger transposable element derived 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005360559.3
SIO_010081: Tigd2
subclass of: SO_0000673
so part of: Tigd2
location: complement(join(13032433..13034758,13034847..13035050,13035209..13035474))
location: region:13032433-13035474:-1
so has part: feature:13035209-13035474:-1:exon
so has part: feature:13034847-13035050:-1:exon
so has part: feature:13032433-13034758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13035209-13035474:-1:exon

position:13035209:-1
position: 13035209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13034847-13035050:-1:exon

position:13034847:-1
position: 13034847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13035050:-1
position: 13035050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13032433-13034758:-1:exon

position:13034758:-1
position: 13034758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tigd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tigd2
product: tigger transposable element derived 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005360558.3
SIO_010081: Tigd2
subclass of: SO_0000673
so part of: Tigd2
location: complement(join(13032433..13035050,13035209..13035474))
location: region:13032433-13035474:-1
so has part: feature:13035209-13035474:-1:exon
so has part: feature:13032433-13035050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13035209-13035474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13032433-13035050:-1:exon

Tigd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tigd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 2
translation: MLGKRKRVVLTIKDKLDIIKKLEEGNSFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGVPVSGTICAKQAKFFFDALGMEGDFNASSGWLTRFKQRHGIPKAAGKGAKLKGDETAASEFCGNFQEFMERESLLPEQIYGADQTGLFWKCLPPRALAFDTDQNTSEYRSSRERIIVMCCANATGLHKLNLCVVGKAKRPRAFKGTDLSNLPVAYFSQKSAWIEQSVFRQWFEKCFVPQVQKHLKSKGLREKAVLLLDFPSAHPTQDLLSSDDGRIIVKYLPPNVASLIQPMSQGVLTTVKRYYRAGLIQKYMDEANDPKMFWKNLTVLDAIYEASRAWNMIRSNTITRAWKKLFPGHEENSSVNIGEGAILAANLATVLQNTEDCEHVDIENIEQWLDPRSSDSNCQVLADIVDAKSQAMPAEQKPSRKTRKAELNPDKHISHKAALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRRKQRIQNKNHL
SIO_010081: Tigd2
subclass of: SO_0000673
so part of: Tigd2
location: complement(13032736..13034313)
location: region:13032736-13034313:-1
so has part: feature:13032736-13034313:-1:exon

XP_005360615.1
type: Protein
SIO_000068: ncbiprotein

position:13032736:-1
position: 13032736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13034313:-1
position: 13034313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13032736-13034313:-1:exon

Tigd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tigd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 2
translation: MLGKRKRVVLTIKDKLDIIKKLEEGNSFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGVPVSGTICAKQAKFFFDALGMEGDFNASSGWLTRFKQRHGIPKAAGKGAKLKGDETAASEFCGNFQEFMERESLLPEQIYGADQTGLFWKCLPPRALAFDTDQNTSEYRSSRERIIVMCCANATGLHKLNLCVVGKAKRPRAFKGTDLSNLPVAYFSQKSAWIEQSVFRQWFEKCFVPQVQKHLKSKGLREKAVLLLDFPSAHPTQDLLSSDDGRIIVKYLPPNVASLIQPMSQGVLTTVKRYYRAGLIQKYMDEANDPKMFWKNLTVLDAIYEASRAWNMIRSNTITRAWKKLFPGHEENSSVNIGEGAILAANLATVLQNTEDCEHVDIENIEQWLDPRSSDSNCQVLADIVDAKSQAMPAEQKPSRKTRKAELNPDKHISHKAALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRRKQRIQNKNHL
SIO_010081: Tigd2
subclass of: SO_0000673
so part of: Tigd2
location: complement(13032736..13034313)
location: region:13032736-13034313:-1
so has part: feature:13032736-13034313:-1:exon

XP_005360616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13032736-13034313:-1:exon

LOC101980462
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13056429..13057636)
location: region:13056429-13057636:-1
so has part: feature:13056429-13057636:-1:exon

101980462
type: Gene
SIO_000068: ncbigene

position:13056429:-1
position: 13056429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13057636:-1
position: 13057636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13056429-13057636:-1:exon

LOC101980462
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101980462
subclass of: SO_0000673
so part of: LOC101980462
location: complement(13056429..13056795)
location: region:13056429-13056795:-1
so has part: feature:13056429-13056795:-1:exon

position:13056795:-1
position: 13056795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13056429-13056795:-1:exon

LOC101980462
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101980462
subclass of: SO_0000673
so part of: LOC101980462
location: complement(13057315..13057636)
location: region:13057315-13057636:-1
so has part: feature:13057315-13057636:-1:exon

position:13057315:-1
position: 13057315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13057315-13057636:-1:exon

Fam13a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fam13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13252030..13339050
location: region:13252030-13339050:1
so has part: feature:13252030-13339050:1:exon
subclass of: SO_0000010

101988562
type: Gene
SIO_000068: ncbigene

position:13252030:1
position: 13252030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13339050:1
position: 13339050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13252030-13339050:1:exon

Fam13a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fam13a
product: family with sequence similarity 13 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360560.3
SIO_010081: Fam13a
subclass of: SO_0000673
so part of: Fam13a
location: join(13252030..13252245,13268500..13268541,13283390..13283431,13288543..13288719,13295401..13295587,13303751..13303821,13304788..13304830,13311112..13311259,13319185..13319389,13319877..13320015,13320669..13320750,13321514..13321734,13322460..13322543,13327881..13327976,13329757..13329840,13333410..13333606,13334520..13334621,13337398..13339050)
location: region:13252030-13339050:1
so has part: feature:13252030-13252245:1:exon
so has part: feature:13268500-13268541:1:exon
so has part: feature:13283390-13283431:1:exon
so has part: feature:13288543-13288719:1:exon
so has part: feature:13295401-13295587:1:exon
so has part: feature:13303751-13303821:1:exon
so has part: feature:13304788-13304830:1:exon
so has part: feature:13311112-13311259:1:exon
so has part: feature:13319185-13319389:1:exon
so has part: feature:13319877-13320015:1:exon
so has part: feature:13320669-13320750:1:exon
so has part: feature:13321514-13321734:1:exon
so has part: feature:13322460-13322543:1:exon
so has part: feature:13327881-13327976:1:exon
so has part: feature:13329757-13329840:1:exon
so has part: feature:13333410-13333606:1:exon
so has part: feature:13334520-13334621:1:exon
so has part: feature:13337398-13339050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13252030-13252245:1:exon

position:13252245:1
position: 13252245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13268500-13268541:1:exon

position:13268500:1
position: 13268500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13268541:1
position: 13268541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13283390-13283431:1:exon

position:13283390:1
position: 13283390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13283431:1
position: 13283431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13288543-13288719:1:exon

position:13288543:1
position: 13288543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13288719:1
position: 13288719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13295401-13295587:1:exon

position:13295401:1
position: 13295401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13295587:1
position: 13295587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13303751-13303821:1:exon

position:13303751:1
position: 13303751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13303821:1
position: 13303821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13304788-13304830:1:exon

position:13304788:1
position: 13304788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13304830:1
position: 13304830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13311112-13311259:1:exon

position:13311112:1
position: 13311112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13311259:1
position: 13311259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13319185-13319389:1:exon

position:13319185:1
position: 13319185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13319389:1
position: 13319389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13319877-13320015:1:exon

position:13319877:1
position: 13319877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13320015:1
position: 13320015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13320669-13320750:1:exon

position:13320669:1
position: 13320669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13320750:1
position: 13320750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13321514-13321734:1:exon

position:13321514:1
position: 13321514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13321734:1
position: 13321734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13322460-13322543:1:exon

position:13322460:1
position: 13322460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13322543:1
position: 13322543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13327881-13327976:1:exon

position:13327881:1
position: 13327881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13327976:1
position: 13327976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13329757-13329840:1:exon

position:13329757:1
position: 13329757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13329840:1
position: 13329840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13333410-13333606:1:exon

position:13333410:1
position: 13333410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13333606:1
position: 13333606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13334520-13334621:1:exon

position:13334520:1
position: 13334520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13334621:1
position: 13334621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13337398-13339050:1:exon

position:13337398:1
position: 13337398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fam13a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fam13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM13A
translation: MACEIMPLRSSQEDERPLSPFYLSAHVSQVSNVSTTGELLERTIRSAVEEHLFDVNSSGDQSSEDSETGPPSPSSTPTRHRGHQFKKQDDVWHGRDKELINKENIPYGFHSYDECVVNSQEAERLPEDTCDCVGERSKPKRQKSSSRLTELSENHEGLLNVDSSVPSHGRPGPEAVELRSNESKENGSGSGDPQHCESPTMKIQEHPSISDTKQQRNQDADDQQESFVPEMPRLDLTALCDEKNWEEPIPSWQQENVDSDEARLSPQAGRLIHQLLDEDSDPMLSPRFYAYGQSRQYLDDTEVPPSPPNSHPFMRRRSSSLGSYDDEQEDLTPVQLTRRIQTLKKKIRRFEDRFEEERKYRPSHSDKAANPEVLKWTNDLAKFRKQLKESKLKISEEDLTPRTRQRSNTLPKSFGSQLEKEDEKKQELVDKAIKPSVEATLECIQRKLQEKRAESSRPEDIKDMTKDQIANEKVALQKALLYYESIHGRPVTKTERQIMKPLYDRYRLVKQILSRASAVPIMGSPTSKRRSPLLQPIIEGETASFFKEIKEQEDASEDDSSAKPDFTVTLKTDCGAQCFLEHLEDDADGFISPMDDKMPSKCSQDSGLSNLHSASIPELLEYLQEMREEKKMIRQKLHDFEDNFFRQNGRNVQKEDRTPMAKEYSEYKHIKAKLRLLEVLISKRDTDSKSM
SIO_010081: Fam13a
subclass of: SO_0000673
so part of: Fam13a
location: join(13252217..13252245,13268500..13268541,13283390..13283431,13288543..13288719,13295401..13295587,13303751..13303821,13304788..13304830,13311112..13311259,13319185..13319389,13319877..13320015,13320669..13320750,13321514..13321734,13322460..13322543,13327881..13327976,13329757..13329840,13333410..13333606,13334520..13334621,13337398..13337524)
location: region:13252217-13337524:1
so has part: feature:13252217-13252245:1:exon
so has part: feature:13268500-13268541:1:exon
so has part: feature:13283390-13283431:1:exon
so has part: feature:13288543-13288719:1:exon
so has part: feature:13295401-13295587:1:exon
so has part: feature:13303751-13303821:1:exon
so has part: feature:13304788-13304830:1:exon
so has part: feature:13311112-13311259:1:exon
so has part: feature:13319185-13319389:1:exon
so has part: feature:13319877-13320015:1:exon
so has part: feature:13320669-13320750:1:exon
so has part: feature:13321514-13321734:1:exon
so has part: feature:13322460-13322543:1:exon
so has part: feature:13327881-13327976:1:exon
so has part: feature:13329757-13329840:1:exon
so has part: feature:13333410-13333606:1:exon
so has part: feature:13334520-13334621:1:exon
so has part: feature:13337398-13337524:1:exon

XP_005360617.1
type: Protein
SIO_000068: ncbiprotein

position:13252217:1
position: 13252217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13337524:1
position: 13337524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13252217-13252245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13268500-13268541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13283390-13283431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13288543-13288719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13295401-13295587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13303751-13303821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13304788-13304830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13311112-13311259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13319185-13319389:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13319877-13320015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13320669-13320750:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13321514-13321734:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13322460-13322543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13327881-13327976:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13329757-13329840:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13333410-13333606:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13334520-13334621:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13337398-13337524:1:exon

Herc3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Herc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13351250..13472699)
location: region:13351250-13472699:-1
so has part: feature:13351250-13472699:-1:exon
subclass of: SO_0000010

101989115
type: Gene
SIO_000068: ncbigene

position:13351250:-1
position: 13351250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13472699:-1
position: 13472699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13351250-13472699:-1:exon

Herc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Herc3
product: HECT and RLD domain containing E3 ubiquitin protein ligase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026785959.1
SIO_010081: Herc3
subclass of: SO_0000673
so part of: Herc3
location: complement(join(13351250..13352949,13357447..13357549,13357727..13357910,13393094..13393176,13393639..13393705,13396258..13396424,13399513..13399656,13400783..13400953,13403253..13403342,13403445..13403465,13420155..13420268,13420384..13420547,13422568..13422757,13423095..13423206,13424882..13424941,13426868..13426992,13431877..13431953,13434320..13434480,13435640..13435770,13437012..13437103,13437942..13438163,13438907..13438983,13439778..13439937,13459952..13460212,13472622..13472699))
location: region:13351250-13472699:-1
so has part: feature:13472622-13472699:-1:exon
so has part: feature:13459952-13460212:-1:exon
so has part: feature:13439778-13439937:-1:exon
so has part: feature:13438907-13438983:-1:exon
so has part: feature:13437942-13438163:-1:exon
so has part: feature:13437012-13437103:-1:exon
so has part: feature:13435640-13435770:-1:exon
so has part: feature:13434320-13434480:-1:exon
so has part: feature:13431877-13431953:-1:exon
so has part: feature:13426868-13426992:-1:exon
so has part: feature:13424882-13424941:-1:exon
so has part: feature:13423095-13423206:-1:exon
so has part: feature:13422568-13422757:-1:exon
so has part: feature:13420384-13420547:-1:exon
so has part: feature:13420155-13420268:-1:exon
so has part: feature:13403445-13403465:-1:exon
so has part: feature:13403253-13403342:-1:exon
so has part: feature:13400783-13400953:-1:exon
so has part: feature:13399513-13399656:-1:exon
so has part: feature:13396258-13396424:-1:exon
so has part: feature:13393639-13393705:-1:exon
so has part: feature:13393094-13393176:-1:exon
so has part: feature:13357727-13357910:-1:exon
so has part: feature:13357447-13357549:-1:exon
so has part: feature:13351250-13352949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13472622-13472699:-1:exon

position:13472622:-1
position: 13472622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13459952-13460212:-1:exon

position:13459952:-1
position: 13459952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13460212:-1
position: 13460212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13439778-13439937:-1:exon

position:13439778:-1
position: 13439778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13439937:-1
position: 13439937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13438907-13438983:-1:exon

position:13438907:-1
position: 13438907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13438983:-1
position: 13438983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13437942-13438163:-1:exon

position:13437942:-1
position: 13437942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13438163:-1
position: 13438163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13437012-13437103:-1:exon

position:13437012:-1
position: 13437012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13437103:-1
position: 13437103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13435640-13435770:-1:exon

position:13435640:-1
position: 13435640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13435770:-1
position: 13435770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13434320-13434480:-1:exon

position:13434320:-1
position: 13434320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13434480:-1
position: 13434480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13431877-13431953:-1:exon

position:13431877:-1
position: 13431877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13431953:-1
position: 13431953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13426868-13426992:-1:exon

position:13426868:-1
position: 13426868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13426992:-1
position: 13426992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13424882-13424941:-1:exon

position:13424882:-1
position: 13424882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13424941:-1
position: 13424941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13423095-13423206:-1:exon

position:13423095:-1
position: 13423095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13423206:-1
position: 13423206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13422568-13422757:-1:exon

position:13422568:-1
position: 13422568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13422757:-1
position: 13422757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13420384-13420547:-1:exon

position:13420384:-1
position: 13420384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13420547:-1
position: 13420547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13420155-13420268:-1:exon

position:13420155:-1
position: 13420155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13420268:-1
position: 13420268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13403445-13403465:-1:exon

position:13403445:-1
position: 13403445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13403465:-1
position: 13403465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13403253-13403342:-1:exon

position:13403253:-1
position: 13403253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13403342:-1
position: 13403342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13400783-13400953:-1:exon

position:13400783:-1
position: 13400783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13400953:-1
position: 13400953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13399513-13399656:-1:exon

position:13399513:-1
position: 13399513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13399656:-1
position: 13399656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:13396258-13396424:-1:exon

position:13396258:-1
position: 13396258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13396424:-1
position: 13396424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:13393639-13393705:-1:exon

position:13393639:-1
position: 13393639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13393705:-1
position: 13393705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:13393094-13393176:-1:exon

position:13393094:-1
position: 13393094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13393176:-1
position: 13393176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:13357727-13357910:-1:exon

position:13357727:-1
position: 13357727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13357910:-1
position: 13357910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:13357447-13357549:-1:exon

position:13357447:-1
position: 13357447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13357549:-1
position: 13357549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:13351250-13352949:-1:exon

position:13352949:-1
position: 13352949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Herc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Herc3
product: HECT and RLD domain containing E3 ubiquitin protein ligase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005360562.2
SIO_010081: Herc3
subclass of: SO_0000673
so part of: Herc3
location: complement(join(13351250..13352949,13357447..13357549,13357727..13357910,13393094..13393176,13393639..13393705,13396258..13396424,13399513..13399656,13400783..13400953,13403253..13403342,13403445..13403468,13420155..13420268,13420384..13420547,13422568..13422757,13423095..13423206,13424882..13424941,13426868..13426992,13431877..13431953,13434320..13434480,13435640..13435770,13437012..13437103,13437942..13438163,13438907..13438983,13439778..13439937,13459952..13460212,13472622..13472699))
location: region:13351250-13472699:-1
so has part: feature:13472622-13472699:-1:exon
so has part: feature:13459952-13460212:-1:exon
so has part: feature:13439778-13439937:-1:exon
so has part: feature:13438907-13438983:-1:exon
so has part: feature:13437942-13438163:-1:exon
so has part: feature:13437012-13437103:-1:exon
so has part: feature:13435640-13435770:-1:exon
so has part: feature:13434320-13434480:-1:exon
so has part: feature:13431877-13431953:-1:exon
so has part: feature:13426868-13426992:-1:exon
so has part: feature:13424882-13424941:-1:exon
so has part: feature:13423095-13423206:-1:exon
so has part: feature:13422568-13422757:-1:exon
so has part: feature:13420384-13420547:-1:exon
so has part: feature:13420155-13420268:-1:exon
so has part: feature:13403445-13403468:-1:exon
so has part: feature:13403253-13403342:-1:exon
so has part: feature:13400783-13400953:-1:exon
so has part: feature:13399513-13399656:-1:exon
so has part: feature:13396258-13396424:-1:exon
so has part: feature:13393639-13393705:-1:exon
so has part: feature:13393094-13393176:-1:exon
so has part: feature:13357727-13357910:-1:exon
so has part: feature:13357447-13357549:-1:exon
so has part: feature:13351250-13352949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13472622-13472699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13459952-13460212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13439778-13439937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13438907-13438983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13437942-13438163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13437012-13437103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13435640-13435770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13434320-13434480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13431877-13431953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13426868-13426992:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13424882-13424941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13423095-13423206:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13422568-13422757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13420384-13420547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13420155-13420268:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13403445-13403468:-1:exon

position:13403468:-1
position: 13403468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13403253-13403342:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13400783-13400953:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13399513-13399656:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13396258-13396424:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13393639-13393705:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13393094-13393176:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13357727-13357910:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13357447-13357549:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13351250-13352949:-1:exon

Herc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Herc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC3 isoform X2
translation: MRTMLCWGYWSLGQPGISSNLRGGGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQHIVHVACGEAHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSTFENSSPAVDFRTVNQAHYTNLINDETIALWRQKLSEHNNANTINGVVQILSSAACWNGSFLEKKIDEHFKTSPQIPGIDLNSTRVLFEKLMHSQHAMILEQILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDTNPSKVLDNWWSQACPKYFLKLVNLYKSAVLYLLRGRKTFLIPVVFNNYVTAALKLLKKLYKVNLRVKHVEYDSFYIPEISSLVDIQEDYLMWFLHQAGMARPSIMQDTVTLCAYPFIFDARAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQESHLLWFSDTCFVERNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNFTVCRESYGVIKQKKLIPGGDRVAVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVCGGKVLELFQPAELRAMVVGNSNYNWEELEETAVYKGDYSGTHPTVRLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTATGEEYLPVAHTCYNLLDLPKYSSKEIMKARLTQALDNYEGFSLA
SIO_010081: Herc3
subclass of: SO_0000673
so part of: Herc3
location: complement(join(13352741..13352949,13357447..13357549,13357727..13357910,13393094..13393176,13393639..13393705,13396258..13396424,13399513..13399656,13400783..13400953,13403253..13403342,13403445..13403465,13420155..13420268,13420384..13420547,13422568..13422757,13423095..13423206,13424882..13424941,13426868..13426992,13431877..13431953,13434320..13434480,13435640..13435770,13437012..13437103,13437942..13438163,13438907..13438983,13439778..13439937,13459952..13460192))
location: region:13352741-13460192:-1
so has part: feature:13459952-13460192:-1:exon
so has part: feature:13439778-13439937:-1:exon
so has part: feature:13438907-13438983:-1:exon
so has part: feature:13437942-13438163:-1:exon
so has part: feature:13437012-13437103:-1:exon
so has part: feature:13435640-13435770:-1:exon
so has part: feature:13434320-13434480:-1:exon
so has part: feature:13431877-13431953:-1:exon
so has part: feature:13426868-13426992:-1:exon
so has part: feature:13424882-13424941:-1:exon
so has part: feature:13423095-13423206:-1:exon
so has part: feature:13422568-13422757:-1:exon
so has part: feature:13420384-13420547:-1:exon
so has part: feature:13420155-13420268:-1:exon
so has part: feature:13403445-13403465:-1:exon
so has part: feature:13403253-13403342:-1:exon
so has part: feature:13400783-13400953:-1:exon
so has part: feature:13399513-13399656:-1:exon
so has part: feature:13396258-13396424:-1:exon
so has part: feature:13393639-13393705:-1:exon
so has part: feature:13393094-13393176:-1:exon
so has part: feature:13357727-13357910:-1:exon
so has part: feature:13357447-13357549:-1:exon
so has part: feature:13352741-13352949:-1:exon

XP_026641760.1
type: Protein
SIO_000068: ncbiprotein

position:13352741:-1
position: 13352741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13460192:-1
position: 13460192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13459952-13460192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13439778-13439937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13438907-13438983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13437942-13438163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13437012-13437103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13435640-13435770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13434320-13434480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13431877-13431953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13426868-13426992:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13424882-13424941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13423095-13423206:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13422568-13422757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13420384-13420547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13420155-13420268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13403445-13403465:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13403253-13403342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13400783-13400953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13399513-13399656:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13396258-13396424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13393639-13393705:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13393094-13393176:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13357727-13357910:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13357447-13357549:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13352741-13352949:-1:exon

Herc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Herc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC3 isoform X1
translation: MRTMLCWGYWSLGQPGISSNLRGGGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQHIVHVACGEAHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSTFENSSPAVDFRTVNQAHYTNLINDETIALWRQKLSEHNNANTINGVVQILSSAACWNGSFLEKKIDEHFKTSPQIPGIDLNSTRVLFEKLMHSQHAMILEQILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDTNPSKVLDNWWSQACPKYFLKLVNLYKSAVLYLLRGRKTFLIPVVFNNYVTAALKLLKKLYKVNLRVKHVEYDSFYIPEISSLVDIQEDYLMWFLHQAGMKARPSIMQDTVTLCAYPFIFDARAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQESHLLWFSDTCFVERNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNFTVCRESYGVIKQKKLIPGGDRVAVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVCGGKVLELFQPAELRAMVVGNSNYNWEELEETAVYKGDYSGTHPTVRLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTATGEEYLPVAHTCYNLLDLPKYSSKEIMKARLTQALDNYEGFSLA
SIO_010081: Herc3
subclass of: SO_0000673
so part of: Herc3
location: complement(join(13352741..13352949,13357447..13357549,13357727..13357910,13393094..13393176,13393639..13393705,13396258..13396424,13399513..13399656,13400783..13400953,13403253..13403342,13403445..13403468,13420155..13420268,13420384..13420547,13422568..13422757,13423095..13423206,13424882..13424941,13426868..13426992,13431877..13431953,13434320..13434480,13435640..13435770,13437012..13437103,13437942..13438163,13438907..13438983,13439778..13439937,13459952..13460192))
location: region:13352741-13460192:-1
so has part: feature:13459952-13460192:-1:exon
so has part: feature:13439778-13439937:-1:exon
so has part: feature:13438907-13438983:-1:exon
so has part: feature:13437942-13438163:-1:exon
so has part: feature:13437012-13437103:-1:exon
so has part: feature:13435640-13435770:-1:exon
so has part: feature:13434320-13434480:-1:exon
so has part: feature:13431877-13431953:-1:exon
so has part: feature:13426868-13426992:-1:exon
so has part: feature:13424882-13424941:-1:exon
so has part: feature:13423095-13423206:-1:exon
so has part: feature:13422568-13422757:-1:exon
so has part: feature:13420384-13420547:-1:exon
so has part: feature:13420155-13420268:-1:exon
so has part: feature:13403445-13403468:-1:exon
so has part: feature:13403253-13403342:-1:exon
so has part: feature:13400783-13400953:-1:exon
so has part: feature:13399513-13399656:-1:exon
so has part: feature:13396258-13396424:-1:exon
so has part: feature:13393639-13393705:-1:exon
so has part: feature:13393094-13393176:-1:exon
so has part: feature:13357727-13357910:-1:exon
so has part: feature:13357447-13357549:-1:exon
so has part: feature:13352741-13352949:-1:exon

XP_005360619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13459952-13460192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13439778-13439937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13438907-13438983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13437942-13438163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13437012-13437103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13435640-13435770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13434320-13434480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13431877-13431953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13426868-13426992:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13424882-13424941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13423095-13423206:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13422568-13422757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13420384-13420547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13420155-13420268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13403445-13403468:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13403253-13403342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13400783-13400953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13399513-13399656:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13396258-13396424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13393639-13393705:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13393094-13393176:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13357727-13357910:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13357447-13357549:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13352741-13352949:-1:exon

Nap1l5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Nap1l5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13375891..13376358
location: region:13375891-13376358:1
so has part: feature:13375891-13376358:1:exon
subclass of: SO_0000010

101988839
type: Gene
SIO_000068: ncbigene

position:13375891:1
position: 13375891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13376358:1
position: 13376358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13375891-13376358:1:exon

Nap1l5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nap1l5
product: nucleosome assembly protein 1 like 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_005360561.1
SIO_010081: Nap1l5
subclass of: SO_0000673
so part of: Nap1l5
location: 13375891..13376358
location: region:13375891-13376358:1
so has part: feature:13375891-13376358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13375891-13376358:1:exon

Nap1l5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nap1l5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleosome assembly protein 1-like 5
translation: MADPEKQGPAESRAEDEVMEGAQGGEDAATGDSAAAPAAEEPQAPAENAPKPKNDFIESLPNSVKCRVLVLKKLQKRCDKIEAKFDKEFQALEKKYNDIYKPLLAKIQELTGEMEGCAWTLEEDDDDDEEEEDEEEEDKEEAAAGATGGPDTGKK
SIO_010081: Nap1l5
subclass of: SO_0000673
so part of: Nap1l5
location: 13375891..13376358
location: region:13375891-13376358:1
so has part: feature:13375891-13376358:1:exon

XP_005360618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13375891-13376358:1:exon

LOC101989399
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101989399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13598615..13698279)
location: region:13598615-13698279:-1
so has part: feature:13598615-13698279:-1:exon
subclass of: SO_0000010

101989399
type: Gene
SIO_000068: ncbigene

position:13598615:-1
position: 13598615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13698279:-1
position: 13698279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13598615-13698279:-1:exon

LOC101989399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101989399
product: ATP-binding cassette sub-family G member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_013351284.2
SIO_010081: LOC101989399
subclass of: SO_0000673
so part of: LOC101989399
location: complement(join(13598615..13598822,13599527..13599615,13600432..13600521,13603656..13603810,13604816..13604940,13605857..13605946,13609488..13609570,13612086..13612336,13614535..13614639,13616417..13616568,13621663..13621820,13623937..13624089,13624637..13624751,13625547..13625606,13632363..13632563,13697797..13698279))
location: region:13598615-13698279:-1
so has part: feature:13697797-13698279:-1:exon
so has part: feature:13632363-13632563:-1:exon
so has part: feature:13625547-13625606:-1:exon
so has part: feature:13624637-13624751:-1:exon
so has part: feature:13623937-13624089:-1:exon
so has part: feature:13621663-13621820:-1:exon
so has part: feature:13616417-13616568:-1:exon
so has part: feature:13614535-13614639:-1:exon
so has part: feature:13612086-13612336:-1:exon
so has part: feature:13609488-13609570:-1:exon
so has part: feature:13605857-13605946:-1:exon
so has part: feature:13604816-13604940:-1:exon
so has part: feature:13603656-13603810:-1:exon
so has part: feature:13600432-13600521:-1:exon
so has part: feature:13599527-13599615:-1:exon
so has part: feature:13598615-13598822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13697797-13698279:-1:exon

position:13697797:-1
position: 13697797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13632363-13632563:-1:exon

position:13632363:-1
position: 13632363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13632563:-1
position: 13632563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13625547-13625606:-1:exon

position:13625547:-1
position: 13625547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13625606:-1
position: 13625606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13624637-13624751:-1:exon

position:13624637:-1
position: 13624637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13624751:-1
position: 13624751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13623937-13624089:-1:exon

position:13623937:-1
position: 13623937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13624089:-1
position: 13624089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13621663-13621820:-1:exon

position:13621663:-1
position: 13621663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13621820:-1
position: 13621820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13616417-13616568:-1:exon

position:13616417:-1
position: 13616417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13616568:-1
position: 13616568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13614535-13614639:-1:exon

position:13614535:-1
position: 13614535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13614639:-1
position: 13614639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13612086-13612336:-1:exon

position:13612086:-1
position: 13612086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13612336:-1
position: 13612336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13609488-13609570:-1:exon

position:13609488:-1
position: 13609488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13609570:-1
position: 13609570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13605857-13605946:-1:exon

position:13605857:-1
position: 13605857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13605946:-1
position: 13605946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13604816-13604940:-1:exon

position:13604816:-1
position: 13604816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13604940:-1
position: 13604940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13603656-13603810:-1:exon

position:13603656:-1
position: 13603656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13603810:-1
position: 13603810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13600432-13600521:-1:exon

position:13600432:-1
position: 13600432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13600521:-1
position: 13600521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13599527-13599615:-1:exon

position:13599527:-1
position: 13599527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13599615:-1
position: 13599615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13598615-13598822:-1:exon

position:13598822:-1
position: 13598822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101989399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101989399
product: ATP-binding cassette sub-family G member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005360563.2
SIO_010081: LOC101989399
subclass of: SO_0000673
so part of: LOC101989399
location: complement(join(13598615..13598822,13599527..13599615,13600432..13600521,13603656..13603810,13604816..13604940,13605857..13605946,13609488..13609570,13612086..13612336,13614535..13614639,13616417..13616568,13621663..13621820,13623937..13624089,13624637..13624751,13625547..13625606,13632363..13632563,13647437..13647527))
location: region:13598615-13647527:-1
so has part: feature:13647437-13647527:-1:exon
so has part: feature:13632363-13632563:-1:exon
so has part: feature:13625547-13625606:-1:exon
so has part: feature:13624637-13624751:-1:exon
so has part: feature:13623937-13624089:-1:exon
so has part: feature:13621663-13621820:-1:exon
so has part: feature:13616417-13616568:-1:exon
so has part: feature:13614535-13614639:-1:exon
so has part: feature:13612086-13612336:-1:exon
so has part: feature:13609488-13609570:-1:exon
so has part: feature:13605857-13605946:-1:exon
so has part: feature:13604816-13604940:-1:exon
so has part: feature:13603656-13603810:-1:exon
so has part: feature:13600432-13600521:-1:exon
so has part: feature:13599527-13599615:-1:exon
so has part: feature:13598615-13598822:-1:exon

position:13647527:-1
position: 13647527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13647437-13647527:-1:exon

position:13647437:-1
position: 13647437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13632363-13632563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13625547-13625606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13624637-13624751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13623937-13624089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13621663-13621820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13616417-13616568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13614535-13614639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13612086-13612336:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13609488-13609570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13605857-13605946:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13604816-13604940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13603656-13603810:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13600432-13600521:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13599527-13599615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13598615-13598822:-1:exon

LOC101989399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101989399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family G member 2
translation: MSSSNDHVLVPMSQRNTNGLPGMNPSDVPTLTGDVLSFHNITYRVKMKSGFLGRKKTEKEILSGINGIMKPGLNAILGPTGGGKSSLLDVLAARKDPRGLSGDVLINGAPQPANFKCTSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINMVIKELGLEKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKHGRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPAQAALEYFASAGYQCEPYNNPADFFLDVINGDSSAVVLNREEEPQRENKTEEPSKREKPIIENLAEFYANSSIYRETKAELDRLPRNQKKKGILAFKETTYTTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTTVLALIIGAIYFDLKNDSSGIQNRAGVLFFLTTNQCFTSVSAVELFVVEKKLFIHEYISGYYRVSSYFFGKLISDLLPMRFLPSVIFTCILYFMLGLKNEVGAFFIMMFSLMMVAYTASSMALAIAAGQSVVSVATLLMTISFVFMMIFSGLLVNLTTIEPWLSWLQYFSIPRYGYTALQYNEFLGQDFCGGLNVTANNTCDYSNMMTCTGDAYLERQGIDLSPWGLWSNHVALACMIIIFLTIAYLKLLFLKKYS
SIO_010081: LOC101989399
subclass of: SO_0000673
so part of: LOC101989399
location: complement(join(13598672..13598822,13599527..13599615,13600432..13600521,13603656..13603810,13604816..13604940,13605857..13605946,13609488..13609570,13612086..13612336,13614535..13614639,13616417..13616568,13621663..13621820,13623937..13624089,13624637..13624751,13625547..13625606,13632363..13632559))
location: region:13598672-13632559:-1
so has part: feature:13632363-13632559:-1:exon
so has part: feature:13625547-13625606:-1:exon
so has part: feature:13624637-13624751:-1:exon
so has part: feature:13623937-13624089:-1:exon
so has part: feature:13621663-13621820:-1:exon
so has part: feature:13616417-13616568:-1:exon
so has part: feature:13614535-13614639:-1:exon
so has part: feature:13612086-13612336:-1:exon
so has part: feature:13609488-13609570:-1:exon
so has part: feature:13605857-13605946:-1:exon
so has part: feature:13604816-13604940:-1:exon
so has part: feature:13603656-13603810:-1:exon
so has part: feature:13600432-13600521:-1:exon
so has part: feature:13599527-13599615:-1:exon
so has part: feature:13598672-13598822:-1:exon

XP_005360620.1
type: Protein
SIO_000068: ncbiprotein

position:13598672:-1
position: 13598672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13632559:-1
position: 13632559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13632363-13632559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13625547-13625606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13624637-13624751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13623937-13624089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13621663-13621820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13616417-13616568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13614535-13614639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13612086-13612336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13609488-13609570:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13605857-13605946:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13604816-13604940:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13603656-13603810:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13600432-13600521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13599527-13599615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13598672-13598822:-1:exon

LOC101989399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101989399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family G member 2
translation: MSSSNDHVLVPMSQRNTNGLPGMNPSDVPTLTGDVLSFHNITYRVKMKSGFLGRKKTEKEILSGINGIMKPGLNAILGPTGGGKSSLLDVLAARKDPRGLSGDVLINGAPQPANFKCTSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINMVIKELGLEKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKHGRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPAQAALEYFASAGYQCEPYNNPADFFLDVINGDSSAVVLNREEEPQRENKTEEPSKREKPIIENLAEFYANSSIYRETKAELDRLPRNQKKKGILAFKETTYTTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTTVLALIIGAIYFDLKNDSSGIQNRAGVLFFLTTNQCFTSVSAVELFVVEKKLFIHEYISGYYRVSSYFFGKLISDLLPMRFLPSVIFTCILYFMLGLKNEVGAFFIMMFSLMMVAYTASSMALAIAAGQSVVSVATLLMTISFVFMMIFSGLLVNLTTIEPWLSWLQYFSIPRYGYTALQYNEFLGQDFCGGLNVTANNTCDYSNMMTCTGDAYLERQGIDLSPWGLWSNHVALACMIIIFLTIAYLKLLFLKKYS
SIO_010081: LOC101989399
subclass of: SO_0000673
so part of: LOC101989399
location: complement(join(13598672..13598822,13599527..13599615,13600432..13600521,13603656..13603810,13604816..13604940,13605857..13605946,13609488..13609570,13612086..13612336,13614535..13614639,13616417..13616568,13621663..13621820,13623937..13624089,13624637..13624751,13625547..13625606,13632363..13632559))
location: region:13598672-13632559:-1
so has part: feature:13632363-13632559:-1:exon
so has part: feature:13625547-13625606:-1:exon
so has part: feature:13624637-13624751:-1:exon
so has part: feature:13623937-13624089:-1:exon
so has part: feature:13621663-13621820:-1:exon
so has part: feature:13616417-13616568:-1:exon
so has part: feature:13614535-13614639:-1:exon
so has part: feature:13612086-13612336:-1:exon
so has part: feature:13609488-13609570:-1:exon
so has part: feature:13605857-13605946:-1:exon
so has part: feature:13604816-13604940:-1:exon
so has part: feature:13603656-13603810:-1:exon
so has part: feature:13600432-13600521:-1:exon
so has part: feature:13599527-13599615:-1:exon
so has part: feature:13598672-13598822:-1:exon

XP_013206738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13632363-13632559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13625547-13625606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13624637-13624751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13623937-13624089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13621663-13621820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13616417-13616568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13614535-13614639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13612086-13612336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13609488-13609570:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13605857-13605946:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13604816-13604940:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13603656-13603810:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13600432-13600521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13599527-13599615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13598672-13598822:-1:exon

LOC102001763
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102001763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13617864..13618471)
location: region:13617864-13618471:-1
so has part: feature:13617864-13618471:-1:exon

102001763
type: Gene
SIO_000068: ncbigene

position:13617864:-1
position: 13617864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13618471:-1
position: 13618471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13617864-13618471:-1:exon

LOC102001763
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102001763
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102001763
subclass of: SO_0000673
so part of: LOC102001763
location: complement(13617864..13618471)
location: region:13617864-13618471:-1
so has part: feature:13617864-13618471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13617864-13618471:-1:exon

Fkbp1b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fkbp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13727175..13738833)
location: region:13727175-13738833:-1
so has part: feature:13727175-13738833:-1:exon
subclass of: SO_0000010

101989691
type: Gene
SIO_000068: ncbigene

position:13727175:-1
position: 13727175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13738833:-1
position: 13738833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13727175-13738833:-1:exon

Fkbp1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fkbp1b
product: FK506 binding protein 1B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026785999.1
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727175..13727788,13728764..13728876,13733554..13733601,13738755..13738833))
location: region:13727175-13738833:-1
so has part: feature:13738755-13738833:-1:exon
so has part: feature:13733554-13733601:-1:exon
so has part: feature:13728764-13728876:-1:exon
so has part: feature:13727175-13727788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13738755-13738833:-1:exon

position:13738755:-1
position: 13738755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13733554-13733601:-1:exon

position:13733554:-1
position: 13733554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13733601:-1
position: 13733601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13728764-13728876:-1:exon

position:13728764:-1
position: 13728764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13728876:-1
position: 13728876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13727175-13727788:-1:exon

position:13727788:-1
position: 13727788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fkbp1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fkbp1b
product: FK506 binding protein 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026785997.1
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727175..13727788,13728764..13728876,13736996..13737234))
location: region:13727175-13737234:-1
so has part: feature:13736996-13737234:-1:exon
so has part: feature:13728764-13728876:-1:exon
so has part: feature:13727175-13727788:-1:exon

position:13737234:-1
position: 13737234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736996-13737234:-1:exon

position:13736996:-1
position: 13736996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13728764-13728876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13727175-13727788:-1:exon

Fkbp1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fkbp1b
product: FK506 binding protein 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005360564.2
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727175..13727788,13728764..13728876,13733554..13733601,13736996..13737231))
location: region:13727175-13737231:-1
so has part: feature:13736996-13737231:-1:exon
so has part: feature:13733554-13733601:-1:exon
so has part: feature:13728764-13728876:-1:exon
so has part: feature:13727175-13727788:-1:exon

position:13737231:-1
position: 13737231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736996-13737231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13733554-13733601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728764-13728876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13727175-13727788:-1:exon

Fkbp1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fkbp1b
product: FK506 binding protein 1B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026786000.1
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727175..13727788,13728764..13728876,13733554..13733601,13736935..13736969))
location: region:13727175-13736969:-1
so has part: feature:13736935-13736969:-1:exon
so has part: feature:13733554-13733601:-1:exon
so has part: feature:13728764-13728876:-1:exon
so has part: feature:13727175-13727788:-1:exon

position:13736969:-1
position: 13736969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736935-13736969:-1:exon

position:13736935:-1
position: 13736935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13733554-13733601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728764-13728876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13727175-13727788:-1:exon

Fkbp1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fkbp1b
product: FK506 binding protein 1B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_026785998.1
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727175..13727788,13728764..13728876,13733554..13733601,13736676..13736879))
location: region:13727175-13736879:-1
so has part: feature:13736676-13736879:-1:exon
so has part: feature:13733554-13733601:-1:exon
so has part: feature:13728764-13728876:-1:exon
so has part: feature:13727175-13727788:-1:exon

position:13736879:-1
position: 13736879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736676-13736879:-1:exon

position:13736676:-1
position: 13736676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13733554-13733601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728764-13728876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13727175-13727788:-1:exon

Fkbp1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fkbp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP1B isoform X2
translation: MGVEIETISPGDGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727660..13727788,13728764..13728876,13736996..13737032))
location: region:13727660-13737032:-1
so has part: feature:13736996-13737032:-1:exon
so has part: feature:13728764-13728876:-1:exon
so has part: feature:13727660-13727788:-1:exon

XP_026641798.1
type: Protein
SIO_000068: ncbiprotein

position:13727660:-1
position: 13727660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13737032:-1
position: 13737032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736996-13737032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13728764-13728876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13727660-13727788:-1:exon

Fkbp1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fkbp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP1B isoform X1
translation: MGVEIETISPGDGRTFPKKGQICVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727660..13727788,13728764..13728876,13733554..13733601,13736996..13737032))
location: region:13727660-13737032:-1
so has part: feature:13736996-13737032:-1:exon
so has part: feature:13733554-13733601:-1:exon
so has part: feature:13728764-13728876:-1:exon
so has part: feature:13727660-13727788:-1:exon

XP_005360621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13736996-13737032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13733554-13733601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728764-13728876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13727660-13727788:-1:exon

Fkbp1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fkbp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP1B isoform X3
translation: MLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727660..13727788,13728764..13728874))
location: region:13727660-13728874:-1
so has part: feature:13728764-13728874:-1:exon
so has part: feature:13727660-13727788:-1:exon

XP_026641799.1
type: Protein
SIO_000068: ncbiprotein

position:13728874:-1
position: 13728874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13728764-13728874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13727660-13727788:-1:exon

Fkbp1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fkbp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP1B isoform X3
translation: MLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727660..13727788,13728764..13728874))
location: region:13727660-13728874:-1
so has part: feature:13728764-13728874:-1:exon
so has part: feature:13727660-13727788:-1:exon

XP_026641800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13728764-13728874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13727660-13727788:-1:exon

Fkbp1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fkbp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP1B isoform X3
translation: MLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
SIO_010081: Fkbp1b
subclass of: SO_0000673
so part of: Fkbp1b
location: complement(join(13727660..13727788,13728764..13728874))
location: region:13727660-13728874:-1
so has part: feature:13728764-13728874:-1:exon
so has part: feature:13727660-13727788:-1:exon

XP_026641801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13728764-13728874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13727660-13727788:-1:exon

Wdcp
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Wdcp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13736734..13753055
location: region:13736734-13753055:1
so has part: feature:13736734-13753055:1:exon
subclass of: SO_0000010

101990164
type: Gene
SIO_000068: ncbigene

position:13736734:1
position: 13736734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13753055:1
position: 13753055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736734-13753055:1:exon

Wdcp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Wdcp
product: WD repeat and coiled coil containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026785994.1
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13736734..13736794,13738423..13738593,13744133..13745930,13750039..13750150,13752327..13753055)
location: region:13736734-13753055:1
so has part: feature:13736734-13736794:1:exon
so has part: feature:13738423-13738593:1:exon
so has part: feature:13744133-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13753055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13736734-13736794:1:exon

position:13736794:1
position: 13736794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13738423-13738593:1:exon

position:13738423:1
position: 13738423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13738593:1
position: 13738593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13744133-13745930:1:exon

position:13744133:1
position: 13744133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13745930:1
position: 13745930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13750039-13750150:1:exon

position:13750039:1
position: 13750039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13750150:1
position: 13750150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13752327-13753055:1:exon

position:13752327:1
position: 13752327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Wdcp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Wdcp
product: WD repeat and coiled coil containing, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026785996.1
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13736765..13736794,13744133..13745930,13750039..13750150,13752327..13753055)
location: region:13736765-13753055:1
so has part: feature:13736765-13736794:1:exon
so has part: feature:13744133-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13753055:1:exon

position:13736765:1
position: 13736765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736765-13736794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13744133-13745930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13750039-13750150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13752327-13753055:1:exon

Wdcp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Wdcp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and coiled-coil-containing protein isoform X1
translation: MALGREPLSERMELGNGKLLRTGLNSLNQAVHPTHGLAWTDGNRVILTDLRLQRGEAKFGDSQVIGKFEYVCGVSWAPVSIAHIPTLLAIQHKKHVAVWQLCPSTSGSSKWQMSQTSEIRESLPILPQGCLWHPRDAVLTVLTAQDVSVFPNIHHDGCRVKVDINTKGRIYCACWTLDGQRLVVAVDSSLHSYMWDSSQRSLQSCSFCPVLQVGRSIRSIAATEDSQVAIATELPLHKLCSLNAAEAFAVPPNGEDAGVRSLPVGEMNSGVMVSPFSDPLDLTHIHFNTSPVEESSLVCVRKTDYLTGTGQDSSHLILVTFKKAITMTKKVAIPGILAPDLIAFNLQAQLVAVASNTCNIILIYSTIPSSMPNIQQIQLESNERPKGVCFLTDRFLLISVGKQKPTETAFLPSSESDQYAVRLVVREVTLGRESSGTPAESQDAYSAFNTLLNKVDREKFLESLSPGLSPLSSGLLLTANASTQGGRSGRALIQEITSPLSPLSCDSIVQETPHTSSWLWPGLPRPSRTPDHTSTSESNLPQTENLEKEKETCPHSRELEVLSRHLAGVQQCLFELMDFLHKEKRFSPLYPLSQDPPYVHLIYQKPSVGPAEERAVLLCDGKLRLSTVQQMFGLYLVEMLHNSHWILLSADSQGFIPLTFAASQMVVVRDGSLSKPELARGSPSHNRGPILPPGGFGDLATQNADTAGCFSSVA
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13738580..13738593,13744133..13745930,13750039..13750150,13752327..13752547)
location: region:13738580-13752547:1
so has part: feature:13738580-13738593:1:exon
so has part: feature:13744133-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13752547:1:exon

XP_026641795.1
type: Protein
SIO_000068: ncbiprotein

position:13738580:1
position: 13738580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13752547:1
position: 13752547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13738580-13738593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13744133-13745930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13750039-13750150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13752327-13752547:1:exon

Wdcp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Wdcp
product: WD repeat and coiled coil containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005360567.3
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13738930..13738989,13744133..13745930,13750039..13750150,13752327..13753055)
location: region:13738930-13753055:1
so has part: feature:13738930-13738989:1:exon
so has part: feature:13744133-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13753055:1:exon

position:13738930:1
position: 13738930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13738930-13738989:1:exon

position:13738989:1
position: 13738989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13744133-13745930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13750039-13750150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13752327-13753055:1:exon

Wdcp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Wdcp
product: WD repeat and coiled coil containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005360566.3
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13738949..13739070,13744133..13745930,13750039..13750150,13752327..13753055)
location: region:13738949-13753055:1
so has part: feature:13738949-13739070:1:exon
so has part: feature:13744133-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13753055:1:exon

position:13738949:1
position: 13738949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13738949-13739070:1:exon

position:13739070:1
position: 13739070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13744133-13745930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13750039-13750150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13752327-13753055:1:exon

Wdcp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Wdcp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and coiled-coil-containing protein isoform X2
translation: MELGNGKLLRTGLNSLNQAVHPTHGLAWTDGNRVILTDLRLQRGEAKFGDSQVIGKFEYVCGVSWAPVSIAHIPTLLAIQHKKHVAVWQLCPSTSGSSKWQMSQTSEIRESLPILPQGCLWHPRDAVLTVLTAQDVSVFPNIHHDGCRVKVDINTKGRIYCACWTLDGQRLVVAVDSSLHSYMWDSSQRSLQSCSFCPVLQVGRSIRSIAATEDSQVAIATELPLHKLCSLNAAEAFAVPPNGEDAGVRSLPVGEMNSGVMVSPFSDPLDLTHIHFNTSPVEESSLVCVRKTDYLTGTGQDSSHLILVTFKKAITMTKKVAIPGILAPDLIAFNLQAQLVAVASNTCNIILIYSTIPSSMPNIQQIQLESNERPKGVCFLTDRFLLISVGKQKPTETAFLPSSESDQYAVRLVVREVTLGRESSGTPAESQDAYSAFNTLLNKVDREKFLESLSPGLSPLSSGLLLTANASTQGGRSGRALIQEITSPLSPLSCDSIVQETPHTSSWLWPGLPRPSRTPDHTSTSESNLPQTENLEKEKETCPHSRELEVLSRHLAGVQQCLFELMDFLHKEKRFSPLYPLSQDPPYVHLIYQKPSVGPAEERAVLLCDGKLRLSTVQQMFGLYLVEMLHNSHWILLSADSQGFIPLTFAASQMVVVRDGSLSKPELARGSPSHNRGPILPPGGFGDLATQNADTAGCFSSVA
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13744152..13745930,13750039..13750150,13752327..13752547)
location: region:13744152-13752547:1
so has part: feature:13744152-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13752547:1:exon

XP_026641797.1
type: Protein
SIO_000068: ncbiprotein

position:13744152:1
position: 13744152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13744152-13745930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13750039-13750150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13752327-13752547:1:exon

Wdcp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Wdcp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and coiled-coil-containing protein isoform X2
translation: MELGNGKLLRTGLNSLNQAVHPTHGLAWTDGNRVILTDLRLQRGEAKFGDSQVIGKFEYVCGVSWAPVSIAHIPTLLAIQHKKHVAVWQLCPSTSGSSKWQMSQTSEIRESLPILPQGCLWHPRDAVLTVLTAQDVSVFPNIHHDGCRVKVDINTKGRIYCACWTLDGQRLVVAVDSSLHSYMWDSSQRSLQSCSFCPVLQVGRSIRSIAATEDSQVAIATELPLHKLCSLNAAEAFAVPPNGEDAGVRSLPVGEMNSGVMVSPFSDPLDLTHIHFNTSPVEESSLVCVRKTDYLTGTGQDSSHLILVTFKKAITMTKKVAIPGILAPDLIAFNLQAQLVAVASNTCNIILIYSTIPSSMPNIQQIQLESNERPKGVCFLTDRFLLISVGKQKPTETAFLPSSESDQYAVRLVVREVTLGRESSGTPAESQDAYSAFNTLLNKVDREKFLESLSPGLSPLSSGLLLTANASTQGGRSGRALIQEITSPLSPLSCDSIVQETPHTSSWLWPGLPRPSRTPDHTSTSESNLPQTENLEKEKETCPHSRELEVLSRHLAGVQQCLFELMDFLHKEKRFSPLYPLSQDPPYVHLIYQKPSVGPAEERAVLLCDGKLRLSTVQQMFGLYLVEMLHNSHWILLSADSQGFIPLTFAASQMVVVRDGSLSKPELARGSPSHNRGPILPPGGFGDLATQNADTAGCFSSVA
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13744152..13745930,13750039..13750150,13752327..13752547)
location: region:13744152-13752547:1
so has part: feature:13744152-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13752547:1:exon

XP_005360623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13744152-13745930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13750039-13750150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13752327-13752547:1:exon

Wdcp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Wdcp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and coiled-coil-containing protein isoform X2
translation: MELGNGKLLRTGLNSLNQAVHPTHGLAWTDGNRVILTDLRLQRGEAKFGDSQVIGKFEYVCGVSWAPVSIAHIPTLLAIQHKKHVAVWQLCPSTSGSSKWQMSQTSEIRESLPILPQGCLWHPRDAVLTVLTAQDVSVFPNIHHDGCRVKVDINTKGRIYCACWTLDGQRLVVAVDSSLHSYMWDSSQRSLQSCSFCPVLQVGRSIRSIAATEDSQVAIATELPLHKLCSLNAAEAFAVPPNGEDAGVRSLPVGEMNSGVMVSPFSDPLDLTHIHFNTSPVEESSLVCVRKTDYLTGTGQDSSHLILVTFKKAITMTKKVAIPGILAPDLIAFNLQAQLVAVASNTCNIILIYSTIPSSMPNIQQIQLESNERPKGVCFLTDRFLLISVGKQKPTETAFLPSSESDQYAVRLVVREVTLGRESSGTPAESQDAYSAFNTLLNKVDREKFLESLSPGLSPLSSGLLLTANASTQGGRSGRALIQEITSPLSPLSCDSIVQETPHTSSWLWPGLPRPSRTPDHTSTSESNLPQTENLEKEKETCPHSRELEVLSRHLAGVQQCLFELMDFLHKEKRFSPLYPLSQDPPYVHLIYQKPSVGPAEERAVLLCDGKLRLSTVQQMFGLYLVEMLHNSHWILLSADSQGFIPLTFAASQMVVVRDGSLSKPELARGSPSHNRGPILPPGGFGDLATQNADTAGCFSSVA
SIO_010081: Wdcp
subclass of: SO_0000673
so part of: Wdcp
location: join(13744152..13745930,13750039..13750150,13752327..13752547)
location: region:13744152-13752547:1
so has part: feature:13744152-13745930:1:exon
so has part: feature:13750039-13750150:1:exon
so has part: feature:13752327-13752547:1:exon

XP_005360624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13744152-13745930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13750039-13750150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13752327-13752547:1:exon

Mfsd2b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mfsd2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13759173..13769724)
location: region:13759173-13769724:-1
so has part: feature:13759173-13769724:-1:exon
subclass of: SO_0000010

101980744
type: Gene
SIO_000068: ncbigene

position:13759173:-1
position: 13759173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13769724:-1
position: 13769724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13759173-13769724:-1:exon

Mfsd2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mfsd2b
product: major facilitator superfamily domain containing 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360613.3
SIO_010081: Mfsd2b
subclass of: SO_0000673
so part of: Mfsd2b
location: complement(join(13759173..13759722,13760715..13760891,13761163..13761306,13761565..13761674,13761886..13761966,13762210..13762293,13762797..13762918,13763031..13763121,13764380..13764510,13764598..13764676,13764980..13765103,13765651..13765775,13766616..13766741,13769659..13769724))
location: region:13759173-13769724:-1
so has part: feature:13769659-13769724:-1:exon
so has part: feature:13766616-13766741:-1:exon
so has part: feature:13765651-13765775:-1:exon
so has part: feature:13764980-13765103:-1:exon
so has part: feature:13764598-13764676:-1:exon
so has part: feature:13764380-13764510:-1:exon
so has part: feature:13763031-13763121:-1:exon
so has part: feature:13762797-13762918:-1:exon
so has part: feature:13762210-13762293:-1:exon
so has part: feature:13761886-13761966:-1:exon
so has part: feature:13761565-13761674:-1:exon
so has part: feature:13761163-13761306:-1:exon
so has part: feature:13760715-13760891:-1:exon
so has part: feature:13759173-13759722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13769659-13769724:-1:exon

position:13769659:-1
position: 13769659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13766616-13766741:-1:exon

position:13766616:-1
position: 13766616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13766741:-1
position: 13766741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13765651-13765775:-1:exon

position:13765651:-1
position: 13765651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13765775:-1
position: 13765775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13764980-13765103:-1:exon

position:13764980:-1
position: 13764980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13765103:-1
position: 13765103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13764598-13764676:-1:exon

position:13764598:-1
position: 13764598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13764676:-1
position: 13764676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13764380-13764510:-1:exon

position:13764380:-1
position: 13764380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13764510:-1
position: 13764510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13763031-13763121:-1:exon

position:13763031:-1
position: 13763031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13763121:-1
position: 13763121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13762797-13762918:-1:exon

position:13762797:-1
position: 13762797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13762918:-1
position: 13762918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13762210-13762293:-1:exon

position:13762210:-1
position: 13762210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13762293:-1
position: 13762293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13761886-13761966:-1:exon

position:13761886:-1
position: 13761886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13761966:-1
position: 13761966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13761565-13761674:-1:exon

position:13761565:-1
position: 13761565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13761674:-1
position: 13761674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13761163-13761306:-1:exon

position:13761163:-1
position: 13761163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13761306:-1
position: 13761306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13760715-13760891:-1:exon

position:13760715:-1
position: 13760715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13760891:-1
position: 13760891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13759173-13759722:-1:exon

position:13759722:-1
position: 13759722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mfsd2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mfsd2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 2B
translation: MSFSQEPTQAPVADPHTEEADSDSRAGRLSVCTKLCYGIGGVPNQVASSASAFYLQLFLLDVAQIPAAQVSLALFGGKVSGAVADPVAGFFINKSRRTRAGRLMPWALGCMPLIALAYFFLWFLPPFTSLRGLWYATFYCLYQALSTFFQVPYTALTMILTPSPRERDSATAYRMTMEMAGTLMGATVHGLLVSSAHGSRRCEDPVLAGSTAVSPDVARLYCIAAAVVALTYPVCGGLLCLGVKERPDTSAPASGPGLSFFTGLAITSRHPPYLSLVVSFLFISAAVQVEQSYLVLFCTHASRLQEHVQSLVLTILISAVLSTPLWERVLQRFGKRTSAFGICIMVPFSILLAAVPSAPVAYVVAFVSGVSIAVSLLLPWSMLPDVVDDFQLQHRHGPGVETIFYSSYVFFTKLSGAGALGISTLSLEFAGYKARACQQAEEVVVTLKVLIGAVPTCMILIGLCVLMVGPTPKTPSQDASSQLSLQRRTSYSLA
SIO_010081: Mfsd2b
subclass of: SO_0000673
so part of: Mfsd2b
location: complement(join(13759698..13759722,13760715..13760891,13761163..13761306,13761565..13761674,13761886..13761966,13762210..13762293,13762797..13762918,13763031..13763121,13764380..13764510,13764598..13764676,13764980..13765103,13765651..13765775,13766616..13766741,13769659..13769724))
location: region:13759698-13769724:-1
so has part: feature:13769659-13769724:-1:exon
so has part: feature:13766616-13766741:-1:exon
so has part: feature:13765651-13765775:-1:exon
so has part: feature:13764980-13765103:-1:exon
so has part: feature:13764598-13764676:-1:exon
so has part: feature:13764380-13764510:-1:exon
so has part: feature:13763031-13763121:-1:exon
so has part: feature:13762797-13762918:-1:exon
so has part: feature:13762210-13762293:-1:exon
so has part: feature:13761886-13761966:-1:exon
so has part: feature:13761565-13761674:-1:exon
so has part: feature:13761163-13761306:-1:exon
so has part: feature:13760715-13760891:-1:exon
so has part: feature:13759698-13759722:-1:exon

XP_005360670.1
type: Protein
SIO_000068: ncbiprotein

position:13759698:-1
position: 13759698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13769659-13769724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13766616-13766741:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13765651-13765775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13764980-13765103:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13764598-13764676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13764380-13764510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13763031-13763121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13762797-13762918:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13762210-13762293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13761886-13761966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13761565-13761674:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13761163-13761306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13760715-13760891:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13759698-13759722:-1:exon

Ubxn2a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ubxn2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13775344..13812063)
location: region:13775344-13812063:-1
so has part: feature:13775344-13812063:-1:exon
subclass of: SO_0000010

101990635
type: Gene
SIO_000068: ncbigene

position:13775344:-1
position: 13775344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13812063:-1
position: 13812063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13775344-13812063:-1:exon

Ubxn2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ubxn2a
product: UBX domain protein 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_026786035.1
SIO_010081: Ubxn2a
subclass of: SO_0000673
so part of: Ubxn2a
location: complement(join(13775344..13776209,13779845..13780003,13780992..13781129,13785351..13785457,13787746..13787887,13793377..13793430,13811888..13812063))
location: region:13775344-13812063:-1
so has part: feature:13811888-13812063:-1:exon
so has part: feature:13793377-13793430:-1:exon
so has part: feature:13787746-13787887:-1:exon
so has part: feature:13785351-13785457:-1:exon
so has part: feature:13780992-13781129:-1:exon
so has part: feature:13779845-13780003:-1:exon
so has part: feature:13775344-13776209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13811888-13812063:-1:exon

position:13811888:-1
position: 13811888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13793377-13793430:-1:exon

position:13793377:-1
position: 13793377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13793430:-1
position: 13793430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13787746-13787887:-1:exon

position:13787746:-1
position: 13787746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13787887:-1
position: 13787887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13785351-13785457:-1:exon

position:13785351:-1
position: 13785351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13785457:-1
position: 13785457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13780992-13781129:-1:exon

position:13780992:-1
position: 13780992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13781129:-1
position: 13781129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13779845-13780003:-1:exon

position:13779845:-1
position: 13779845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13780003:-1
position: 13780003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13775344-13776209:-1:exon

position:13776209:-1
position: 13776209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ubxn2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ubxn2a
product: UBX domain protein 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_013351259.2
SIO_010081: Ubxn2a
subclass of: SO_0000673
so part of: Ubxn2a
location: complement(join(13775344..13776209,13779845..13780003,13780992..13781129,13785351..13785457,13787746..13787887,13793377..13793430,13811181..13811275))
location: region:13775344-13811275:-1
so has part: feature:13811181-13811275:-1:exon
so has part: feature:13793377-13793430:-1:exon
so has part: feature:13787746-13787887:-1:exon
so has part: feature:13785351-13785457:-1:exon
so has part: feature:13780992-13781129:-1:exon
so has part: feature:13779845-13780003:-1:exon
so has part: feature:13775344-13776209:-1:exon

position:13811275:-1
position: 13811275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13811181-13811275:-1:exon

position:13811181:-1
position: 13811181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13793377-13793430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13787746-13787887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13785351-13785457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13780992-13781129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13779845-13780003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13775344-13776209:-1:exon

Ubxn2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ubxn2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBX domain-containing protein 2A
translation: MKEVDNLDSIKEEWVCETGPPNNQPLNGNQQRDCEYFVDSLFEEAEKVGAKCLSPTEQKKQVDVNIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPSELRGIFDKEEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPKIVSKAKSIEVEKKSTLSAVSLNNLEPITRIQIWLANGERTVQRFNISHRVSHIKDFIEKYQGSQRSPPFALATALPFLRLLDETLTLEEADLQNAVIIQRLQITSEPFRKL
SIO_010081: Ubxn2a
subclass of: SO_0000673
so part of: Ubxn2a
location: complement(join(13776020..13776209,13779845..13780003,13780992..13781129,13785351..13785457,13787746..13787887,13793377..13793417))
location: region:13776020-13793417:-1
so has part: feature:13793377-13793417:-1:exon
so has part: feature:13787746-13787887:-1:exon
so has part: feature:13785351-13785457:-1:exon
so has part: feature:13780992-13781129:-1:exon
so has part: feature:13779845-13780003:-1:exon
so has part: feature:13776020-13776209:-1:exon

XP_026641836.1
type: Protein
SIO_000068: ncbiprotein

position:13776020:-1
position: 13776020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13793417:-1
position: 13793417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13793377-13793417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13787746-13787887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13785351-13785457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13780992-13781129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13779845-13780003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13776020-13776209:-1:exon

Ubxn2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ubxn2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBX domain-containing protein 2A
translation: MKEVDNLDSIKEEWVCETGPPNNQPLNGNQQRDCEYFVDSLFEEAEKVGAKCLSPTEQKKQVDVNIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPSELRGIFDKEEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPKIVSKAKSIEVEKKSTLSAVSLNNLEPITRIQIWLANGERTVQRFNISHRVSHIKDFIEKYQGSQRSPPFALATALPFLRLLDETLTLEEADLQNAVIIQRLQITSEPFRKL
SIO_010081: Ubxn2a
subclass of: SO_0000673
so part of: Ubxn2a
location: complement(join(13776020..13776209,13779845..13780003,13780992..13781129,13785351..13785457,13787746..13787887,13793377..13793417))
location: region:13776020-13793417:-1
so has part: feature:13793377-13793417:-1:exon
so has part: feature:13787746-13787887:-1:exon
so has part: feature:13785351-13785457:-1:exon
so has part: feature:13780992-13781129:-1:exon
so has part: feature:13779845-13780003:-1:exon
so has part: feature:13776020-13776209:-1:exon

XP_013206713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13793377-13793417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13787746-13787887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13785351-13785457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13780992-13781129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13779845-13780003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13776020-13776209:-1:exon

Atad2b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Atad2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13820665..13955627
location: region:13820665-13955627:1
so has part: feature:13820665-13955627:1:exon
subclass of: SO_0000010

101991203
type: Gene
SIO_000068: ncbigene

position:13820665:1
position: 13820665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13955627:1
position: 13955627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13820665-13955627:1:exon

Atad2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atad2b
product: ATPase family, AAA domain containing 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360570.3
SIO_010081: Atad2b
subclass of: SO_0000673
so part of: Atad2b
location: join(13820665..13821264,13844282..13844433,13847066..13847115,13847495..13847648,13852719..13852821,13853813..13853921,13856656..13856772,13863513..13863588,13866880..13866978,13870092..13870203,13872415..13872530,13873405..13873579,13878243..13878331,13885139..13885298,13887852..13887942,13892336..13892647,13895406..13895541,13897300..13897486,13911175..13911360,13917005..13917140,13920434..13920630,13923508..13923667,13932513..13932635,13934962..13935099,13938520..13939200,13941107..13941234,13941527..13941655,13952285..13955627)
location: region:13820665-13955627:1
so has part: feature:13820665-13821264:1:exon
so has part: feature:13844282-13844433:1:exon
so has part: feature:13847066-13847115:1:exon
so has part: feature:13847495-13847648:1:exon
so has part: feature:13852719-13852821:1:exon
so has part: feature:13853813-13853921:1:exon
so has part: feature:13856656-13856772:1:exon
so has part: feature:13863513-13863588:1:exon
so has part: feature:13866880-13866978:1:exon
so has part: feature:13870092-13870203:1:exon
so has part: feature:13872415-13872530:1:exon
so has part: feature:13873405-13873579:1:exon
so has part: feature:13878243-13878331:1:exon
so has part: feature:13885139-13885298:1:exon
so has part: feature:13887852-13887942:1:exon
so has part: feature:13892336-13892647:1:exon
so has part: feature:13895406-13895541:1:exon
so has part: feature:13897300-13897486:1:exon
so has part: feature:13911175-13911360:1:exon
so has part: feature:13917005-13917140:1:exon
so has part: feature:13920434-13920630:1:exon
so has part: feature:13923508-13923667:1:exon
so has part: feature:13932513-13932635:1:exon
so has part: feature:13934962-13935099:1:exon
so has part: feature:13938520-13939200:1:exon
so has part: feature:13941107-13941234:1:exon
so has part: feature:13941527-13941655:1:exon
so has part: feature:13952285-13955627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13820665-13821264:1:exon

position:13821264:1
position: 13821264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13844282-13844433:1:exon

position:13844282:1
position: 13844282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13844433:1
position: 13844433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13847066-13847115:1:exon

position:13847066:1
position: 13847066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13847115:1
position: 13847115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13847495-13847648:1:exon

position:13847495:1
position: 13847495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13847648:1
position: 13847648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13852719-13852821:1:exon

position:13852719:1
position: 13852719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13852821:1
position: 13852821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13853813-13853921:1:exon

position:13853813:1
position: 13853813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13853921:1
position: 13853921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13856656-13856772:1:exon

position:13856656:1
position: 13856656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13856772:1
position: 13856772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13863513-13863588:1:exon

position:13863513:1
position: 13863513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13863588:1
position: 13863588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13866880-13866978:1:exon

position:13866880:1
position: 13866880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13866978:1
position: 13866978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13870092-13870203:1:exon

position:13870092:1
position: 13870092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13870203:1
position: 13870203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13872415-13872530:1:exon

position:13872415:1
position: 13872415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13872530:1
position: 13872530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13873405-13873579:1:exon

position:13873405:1
position: 13873405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13873579:1
position: 13873579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13878243-13878331:1:exon

position:13878243:1
position: 13878243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13878331:1
position: 13878331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13885139-13885298:1:exon

position:13885139:1
position: 13885139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13885298:1
position: 13885298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13887852-13887942:1:exon

position:13887852:1
position: 13887852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13887942:1
position: 13887942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13892336-13892647:1:exon

position:13892336:1
position: 13892336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13892647:1
position: 13892647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13895406-13895541:1:exon

position:13895406:1
position: 13895406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13895541:1
position: 13895541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13897300-13897486:1:exon

position:13897300:1
position: 13897300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13897486:1
position: 13897486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13911175-13911360:1:exon

position:13911175:1
position: 13911175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13911360:1
position: 13911360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:13917005-13917140:1:exon

position:13917005:1
position: 13917005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13917140:1
position: 13917140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:13920434-13920630:1:exon

position:13920434:1
position: 13920434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13920630:1
position: 13920630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:13923508-13923667:1:exon

position:13923508:1
position: 13923508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13923667:1
position: 13923667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:13932513-13932635:1:exon

position:13932513:1
position: 13932513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13932635:1
position: 13932635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:13934962-13935099:1:exon

position:13934962:1
position: 13934962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13935099:1
position: 13935099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:13938520-13939200:1:exon

position:13938520:1
position: 13938520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13939200:1
position: 13939200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:13941107-13941234:1:exon

position:13941107:1
position: 13941107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13941234:1
position: 13941234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:13941527-13941655:1:exon

position:13941527:1
position: 13941527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13941655:1
position: 13941655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:13952285-13955627:1:exon

position:13952285:1
position: 13952285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Atad2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atad2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase family AAA domain-containing protein 2B
translation: MVNTRKSSLRLLGSKSPGPGPGPGAGAEPGATGGSSHFISSRTRSSKTRAASCPAAKAGGSGGALDEARKTEVDGSLSDSHVSPPAKRTLKQPDSVCKDKSKSRSTGQREEWNIPTGQARLTSQPGATLPNGHSSLSLRSHPLRGEKKGDGDLSCINGDMEVRKSCRSRKNRFESVNQSLLFDQLVNSTAEAVLQEMDNINIRRNRRSGEVERLRMWTDTEFENMDMYSRVKRRRKSLRRNSYGIQNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPPIVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEERFERRKSKSMARARNRCLPMNFRAEDLAGGILRERVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQRARKHILQIHTRDWSPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLDVSSIVLSAQDFYHAMQNIVPASQRAVMSSGQALSPIIRPLLERSFSNILAVLQKVFPHAEISQSDRKEDTETLILDDSEDENTLSIFEMNCHSGSPKKPSPAAAIAKPYLHFTMSPYHQPTSYRPRLLLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYSVSAKTPEESCAQIFREARRTVPSVVYMPHIGDWWEAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEEVKCIFRIQYEEVLYIQRPIEEDRRKFFQELILHQASLAPPRRKHTALCAMEVLPLALPSPPRQLSESEKNRMEDQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLQDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDPEFNKLCEEIKEARIKRGLSVPAEQITPHGTGARKTETRLEEAFRHKQRSPMDAWHNSANKCAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYDHTEDRKLLENGEFEVSTDCHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSEAGTKENFASTEEESSNESLLVHSSSTLNPEQTSKKEPFLKGSCLNGEASTDSFEGIPVLACQNGKTEIVPLSAGGEKSSSEQKIPSEEQPKDKPETLNEDPGDDPEKLEVLGCSSNEKIEPGPDVEVKDTELDKEGASKIKKYRKLILEQAKTTGLELVPEEPSEPVPPLIVDHERLKKLLDLLVDKSNNLTVDQLERLYSLLSQCIYRHRKDYDKSQLVEEMERTVHMFETFL
SIO_010081: Atad2b
subclass of: SO_0000673
so part of: Atad2b
location: join(13821058..13821264,13844282..13844433,13847066..13847115,13847495..13847648,13852719..13852821,13853813..13853921,13856656..13856772,13863513..13863588,13866880..13866978,13870092..13870203,13872415..13872530,13873405..13873579,13878243..13878331,13885139..13885298,13887852..13887942,13892336..13892647,13895406..13895541,13897300..13897486,13911175..13911360,13917005..13917140,13920434..13920630,13923508..13923667,13932513..13932635,13934962..13935099,13938520..13939200,13941107..13941234,13941527..13941655,13952285..13952326)
location: region:13821058-13952326:1
so has part: feature:13821058-13821264:1:exon
so has part: feature:13844282-13844433:1:exon
so has part: feature:13847066-13847115:1:exon
so has part: feature:13847495-13847648:1:exon
so has part: feature:13852719-13852821:1:exon
so has part: feature:13853813-13853921:1:exon
so has part: feature:13856656-13856772:1:exon
so has part: feature:13863513-13863588:1:exon
so has part: feature:13866880-13866978:1:exon
so has part: feature:13870092-13870203:1:exon
so has part: feature:13872415-13872530:1:exon
so has part: feature:13873405-13873579:1:exon
so has part: feature:13878243-13878331:1:exon
so has part: feature:13885139-13885298:1:exon
so has part: feature:13887852-13887942:1:exon
so has part: feature:13892336-13892647:1:exon
so has part: feature:13895406-13895541:1:exon
so has part: feature:13897300-13897486:1:exon
so has part: feature:13911175-13911360:1:exon
so has part: feature:13917005-13917140:1:exon
so has part: feature:13920434-13920630:1:exon
so has part: feature:13923508-13923667:1:exon
so has part: feature:13932513-13932635:1:exon
so has part: feature:13934962-13935099:1:exon
so has part: feature:13938520-13939200:1:exon
so has part: feature:13941107-13941234:1:exon
so has part: feature:13941527-13941655:1:exon
so has part: feature:13952285-13952326:1:exon

XP_005360627.1
type: Protein
SIO_000068: ncbiprotein

position:13821058:1
position: 13821058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13952326:1
position: 13952326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13821058-13821264:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13844282-13844433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13847066-13847115:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13847495-13847648:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13852719-13852821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13853813-13853921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13856656-13856772:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13863513-13863588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13866880-13866978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13870092-13870203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13872415-13872530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13873405-13873579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13878243-13878331:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13885139-13885298:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13887852-13887942:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13892336-13892647:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13895406-13895541:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13897300-13897486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13911175-13911360:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13917005-13917140:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13920434-13920630:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13923508-13923667:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13932513-13932635:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13934962-13935099:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13938520-13939200:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13941107-13941234:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13941527-13941655:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13952285-13952326:1:exon

LOC101990923
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101990923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13860509..13860850)
location: region:13860509-13860850:-1
so has part: feature:13860509-13860850:-1:exon
subclass of: SO_0000010

101990923
type: Gene
SIO_000068: ncbigene

position:13860509:-1
position: 13860509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13860850:-1
position: 13860850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13860509-13860850:-1:exon

LOC101990923
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101990923
product: 60S ribosomal protein L30-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_005360569.1
SIO_010081: LOC101990923
subclass of: SO_0000673
so part of: LOC101990923
location: complement(13860509..13860850)
location: region:13860509-13860850:-1
so has part: feature:13860509-13860850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13860509-13860850:-1:exon

LOC101990923
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101990923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L30-like
translation: MVVTKMKKSLESIYSRLQFVMKSGKYVLRYKQTLKMIRQGKVKLVILTNCPALRKSEIEYYTVLAKTSVHHYNGNNIQLVTTCRKYYRISTLATIDPGDSDTNRSMQDQTGEK
SIO_010081: LOC101990923
subclass of: SO_0000673
so part of: LOC101990923
location: complement(13860509..13860850)
location: region:13860509-13860850:-1
so has part: feature:13860509-13860850:-1:exon

XP_005360626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13860509-13860850:-1:exon

LOC113457631
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457631
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(13905896..13905996)
location: region:13905896-13905996:-1
so has part: feature:13905896-13905996:-1:exon

113457631
type: Gene
SIO_000068: ncbigene

position:13905896:-1
position: 13905896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13905996:-1
position: 13905996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13905896-13905996:-1:exon

LOC113457631
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457631
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC113457631
subclass of: SO_0000673
so part of: LOC113457631
location: complement(13905896..13905996)
location: region:13905896-13905996:-1
so has part: feature:13905896-13905996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13905896-13905996:-1:exon

Klhl29
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Klhl29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13973357..14278447)
location: region:13973357-14278447:-1
so has part: feature:13973357-14278447:-1:exon
subclass of: SO_0000010

101991666
type: Gene
SIO_000068: ncbigene

position:13973357:-1
position: 13973357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14278447:-1
position: 14278447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13973357-14278447:-1:exon

Klhl29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Klhl29
product: kelch like family member 29, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_026786007.1
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13973357..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035134,14104547..14104879,14277836..14278447))
location: region:13973357-14278447:-1
so has part: feature:14277836-14278447:-1:exon
so has part: feature:14104547-14104879:-1:exon
so has part: feature:14034993-14035134:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13973357-13975555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14277836-14278447:-1:exon

position:14277836:-1
position: 14277836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14104547-14104879:-1:exon

position:14104547:-1
position: 14104547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14104879:-1
position: 14104879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14034993-14035134:-1:exon

position:14034993:-1
position: 14034993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14035134:-1
position: 14035134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14032086-14032598:-1:exon

position:14032086:-1
position: 14032086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14032598:-1
position: 14032598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13997159-13997297:-1:exon

position:13997159:-1
position: 13997159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13997297:-1
position: 13997297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13989266-13989468:-1:exon

position:13989266:-1
position: 13989266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13989468:-1
position: 13989468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13987835-13988094:-1:exon

position:13987835:-1
position: 13987835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13988094:-1
position: 13988094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13985592-13985790:-1:exon

position:13985592:-1
position: 13985592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13985790:-1
position: 13985790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13985268-13985450:-1:exon

position:13985268:-1
position: 13985268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13985450:-1
position: 13985450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13984874-13985054:-1:exon

position:13984874:-1
position: 13984874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13985054:-1
position: 13985054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13978150-13978343:-1:exon

position:13978150:-1
position: 13978150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13978343:-1
position: 13978343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13977698-13977842:-1:exon

position:13977698:-1
position: 13977698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13977842:-1
position: 13977842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13973357-13975555:-1:exon

position:13975555:-1
position: 13975555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Klhl29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Klhl29
product: kelch like family member 29, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013351280.2
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13973357..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035134,14193987..14194094,14277836..14278447))
location: region:13973357-14278447:-1
so has part: feature:14277836-14278447:-1:exon
so has part: feature:14193987-14194094:-1:exon
so has part: feature:14034993-14035134:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13973357-13975555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14277836-14278447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14193987-14194094:-1:exon

position:14193987:-1
position: 14193987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14194094:-1
position: 14194094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14034993-14035134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14032086-14032598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13997159-13997297:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13989266-13989468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13987835-13988094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13985592-13985790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13985268-13985450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13984874-13985054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13978150-13978343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13977698-13977842:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13973357-13975555:-1:exon

Klhl29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Klhl29
product: kelch like family member 29, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_026786006.1
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13973357..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035134,14104547..14104879,14193987..14194094,14277836..14278447))
location: region:13973357-14278447:-1
so has part: feature:14277836-14278447:-1:exon
so has part: feature:14193987-14194094:-1:exon
so has part: feature:14104547-14104879:-1:exon
so has part: feature:14034993-14035134:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13973357-13975555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14277836-14278447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14193987-14194094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14104547-14104879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14034993-14035134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14032086-14032598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13997159-13997297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13989266-13989468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13987835-13988094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13985592-13985790:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13985268-13985450:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13984874-13985054:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13978150-13978343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13977698-13977842:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13973357-13975555:-1:exon

Klhl29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Klhl29
product: kelch like family member 29, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026786008.1
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13973357..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035134,14104547..14104879,14151393..14151438))
location: region:13973357-14151438:-1
so has part: feature:14151393-14151438:-1:exon
so has part: feature:14104547-14104879:-1:exon
so has part: feature:14034993-14035134:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13973357-13975555:-1:exon

position:14151438:-1
position: 14151438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14151393-14151438:-1:exon

position:14151393:-1
position: 14151393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14104547-14104879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14034993-14035134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14032086-14032598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13997159-13997297:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13989266-13989468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13987835-13988094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13985592-13985790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13985268-13985450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13984874-13985054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13978150-13978343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13977698-13977842:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13973357-13975555:-1:exon

Klhl29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Klhl29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 29 isoform X1
translation: MSRHHSRFERDYRVGWDRREWSVNGTHGATSVCSGTSGAGGGGTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGSNEAITSLVASSASAVTTKAPGISKADNQSQGLTTSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPSLIAHSYGVTQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLLPGHYSLPQPPAQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSAALPNSAPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKDMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQSSREKLELVLSNLQADVLESLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPAARAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKVYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13975372..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035134,14104547..14104834))
location: region:13975372-14104834:-1
so has part: feature:14104547-14104834:-1:exon
so has part: feature:14034993-14035134:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13975372-13975555:-1:exon

XP_026641807.1
type: Protein
SIO_000068: ncbiprotein

position:13975372:-1
position: 13975372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14104834:-1
position: 14104834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14104547-14104834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14034993-14035134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14032086-14032598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13997159-13997297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13989266-13989468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13987835-13988094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13985592-13985790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13985268-13985450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13984874-13985054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13978150-13978343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13977698-13977842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13975372-13975555:-1:exon

Klhl29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Klhl29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 29 isoform X1
translation: MSRHHSRFERDYRVGWDRREWSVNGTHGATSVCSGTSGAGGGGTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGSNEAITSLVASSASAVTTKAPGISKADNQSQGLTTSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPSLIAHSYGVTQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLLPGHYSLPQPPAQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSAALPNSAPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKDMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQSSREKLELVLSNLQADVLESLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPAARAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKVYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13975372..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035134,14104547..14104834))
location: region:13975372-14104834:-1
so has part: feature:14104547-14104834:-1:exon
so has part: feature:14034993-14035134:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13975372-13975555:-1:exon

XP_026641808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14104547-14104834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14034993-14035134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14032086-14032598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13997159-13997297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13989266-13989468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13987835-13988094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13985592-13985790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13985268-13985450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13984874-13985054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13978150-13978343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13977698-13977842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13975372-13975555:-1:exon

Klhl29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Klhl29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 29 isoform X1
translation: MSRHHSRFERDYRVGWDRREWSVNGTHGATSVCSGTSGAGGGGTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGSNEAITSLVASSASAVTTKAPGISKADNQSQGLTTSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPSLIAHSYGVTQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLLPGHYSLPQPPAQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSAALPNSAPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKDMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQSSREKLELVLSNLQADVLESLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPAARAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKVYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13975372..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035134,14104547..14104834))
location: region:13975372-14104834:-1
so has part: feature:14104547-14104834:-1:exon
so has part: feature:14034993-14035134:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13975372-13975555:-1:exon

XP_026641809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14104547-14104834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14034993-14035134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14032086-14032598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13997159-13997297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13989266-13989468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13987835-13988094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13985592-13985790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13985268-13985450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13984874-13985054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13978150-13978343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13977698-13977842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13975372-13975555:-1:exon

Klhl29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Klhl29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 29 isoform X2
translation: MRESDNPGTGPWVTTVAAGNQPSLIAHSYGVTQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLLPGHYSLPQPPAQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSAALPNSAPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKDMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQSSREKLELVLSNLQADVLESLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPAARAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKVYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG
SIO_010081: Klhl29
subclass of: SO_0000673
so part of: Klhl29
location: complement(join(13975372..13975555,13977698..13977842,13978150..13978343,13984874..13985054,13985268..13985450,13985592..13985790,13987835..13988094,13989266..13989468,13997159..13997297,14032086..14032598,14034993..14035014))
location: region:13975372-14035014:-1
so has part: feature:14034993-14035014:-1:exon
so has part: feature:14032086-14032598:-1:exon
so has part: feature:13997159-13997297:-1:exon
so has part: feature:13989266-13989468:-1:exon
so has part: feature:13987835-13988094:-1:exon
so has part: feature:13985592-13985790:-1:exon
so has part: feature:13985268-13985450:-1:exon
so has part: feature:13984874-13985054:-1:exon
so has part: feature:13978150-13978343:-1:exon
so has part: feature:13977698-13977842:-1:exon
so has part: feature:13975372-13975555:-1:exon

XP_013206734.1
type: Protein
SIO_000068: ncbiprotein

position:14035014:-1
position: 14035014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14034993-14035014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14032086-14032598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13997159-13997297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13989266-13989468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13987835-13988094:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13985592-13985790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13985268-13985450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13984874-13985054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13978150-13978343:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13977698-13977842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13975372-13975555:-1:exon

LOC101992227
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101992227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14687582..14690296)
location: region:14687582-14690296:-1
so has part: feature:14687582-14690296:-1:exon
subclass of: SO_0000011

101992227
type: Gene
SIO_000068: ncbigene

position:14687582:-1
position: 14687582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14690296:-1
position: 14690296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14687582-14690296:-1:exon

LOC101992227
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101992227
product: uncharacterized LOC101992227
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_258633.2
SIO_010081: LOC101992227
subclass of: SO_0000673
so part of: LOC101992227
location: complement(join(14687582..14687798,14688969..14689037,14690069..14690296))
location: region:14687582-14690296:-1
so has part: feature:14690069-14690296:-1:exon
so has part: feature:14688969-14689037:-1:exon
so has part: feature:14687582-14687798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14690069-14690296:-1:exon

position:14690069:-1
position: 14690069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14688969-14689037:-1:exon

position:14688969:-1
position: 14688969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14689037:-1
position: 14689037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14687582-14687798:-1:exon

position:14687798:-1
position: 14687798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Trnan-guu
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Trnan-guu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 14830884..14830958
location: region:14830884-14830958:1
so has part: feature:14830884-14830958:1:exon
subclass of: SO_0000663

113457642
type: Gene
SIO_000068: ncbigene

position:14830884:1
position: 14830884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14830958:1
position: 14830958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14830884-14830958:1:exon

Trnan-guu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 79684
gene: Trnan-guu
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:14830919..14830921,aa:Asn,seq:gtt)
SIO_010081: Trnan-guu
subclass of: SO_0000673
so part of: Trnan-guu
location: 14830884..14830958
location: region:14830884-14830958:1
so has part: feature:14830884-14830958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14830884-14830958:1:exon

LOC101981320
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(14884283..14885163)
location: region:14884283-14885163:-1
so has part: feature:14884283-14885163:-1:exon

101981320
type: Gene
SIO_000068: ncbigene

position:14884283:-1
position: 14884283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14885163:-1
position: 14885163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14884283-14885163:-1:exon

LOC101981320
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981320
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981320
subclass of: SO_0000673
so part of: LOC101981320
location: complement(14884283..14885163)
location: region:14884283-14885163:-1
so has part: feature:14884283-14885163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14884283-14885163:-1:exon

LOC101981576
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 15153905..15160271
location: region:15153905-15160271:1
so has part: feature:15153905-15160271:1:exon

101981576
type: Gene
SIO_000068: ncbigene

position:15153905:1
position: 15153905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15160271:1
position: 15160271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15153905-15160271:1:exon

LOC101981576
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981576
subclass of: SO_0000673
so part of: LOC101981576
location: 15153905..15154348
location: region:15153905-15154348:1
so has part: feature:15153905-15154348:1:exon

position:15154348:1
position: 15154348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15153905-15154348:1:exon

LOC101981576
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981576
subclass of: SO_0000673
so part of: LOC101981576
location: 15160059..15160271
location: region:15160059-15160271:1
so has part: feature:15160059-15160271:1:exon

position:15160059:1
position: 15160059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15160059-15160271:1:exon

LOC101981849
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101981849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 15237377..15242465
location: region:15237377-15242465:1
so has part: feature:15237377-15242465:1:exon

101981849
type: Gene
SIO_000068: ncbigene

position:15237377:1
position: 15237377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15242465:1
position: 15242465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15237377-15242465:1:exon

LOC101981849
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981849
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981849
subclass of: SO_0000673
so part of: LOC101981849
location: 15237377..15237493
location: region:15237377-15237493:1
so has part: feature:15237377-15237493:1:exon

position:15237493:1
position: 15237493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15237377-15237493:1:exon

LOC101981849
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101981849
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101981849
subclass of: SO_0000673
so part of: LOC101981849
location: 15242095..15242465
location: region:15242095-15242465:1
so has part: feature:15242095-15242465:1:exon

position:15242095:1
position: 15242095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15242095-15242465:1:exon

Tdrd15
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tdrd15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16505490..16522452)
location: region:16505490-16522452:-1
so has part: feature:16505490-16522452:-1:exon
subclass of: SO_0000010

101982130
type: Gene
SIO_000068: ncbigene

position:16505490:-1
position: 16505490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16522452:-1
position: 16522452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16505490-16522452:-1:exon

Tdrd15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tdrd15
product: tudor domain containing 15
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013351268.1
SIO_010081: Tdrd15
subclass of: SO_0000673
so part of: Tdrd15
location: complement(join(16505490..16511567,16522382..16522452))
location: region:16505490-16522452:-1
so has part: feature:16522382-16522452:-1:exon
so has part: feature:16505490-16511567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16522382-16522452:-1:exon

position:16522382:-1
position: 16522382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16505490-16511567:-1:exon

position:16511567:-1
position: 16511567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tdrd15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tdrd15
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 2 bases in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(16506937..16506939), aa:OTHER)
transl except: (pos:complement(16506221..16506223), aa:OTHER)
product: LOW QUALITY PROTEIN: tudor domain-containing protein 15
translation: MNSTSLLPTFLDVDLTVLHIECHKDILVKFQGKSNRECHFDYHILQREIQYIPKVKNDVRVDEFCLVEEKVTGEWQRGIVVGKTNELYTVLLIDRGEELRVDGTRVASACDKLFELPPRVVFGIFANILPVGEKWSPKALNYFKSLVGTQLKVNMQTVLPLQMILLEAPKVISEVLELQLGRFIDRDTFRLIVEILKELPKPMPDLLHQKRPESSLSNNSVSLDVQYLLDNFQPSIPVGSLDSVKVSSALSPEKFYCQLLKWIPELEDLTECMNLHYNTIDQENNPTCDNFGLLCVAKGTNGQWQRGILQQLLPNNQVKIWFMDYGSSESIPSVHVKKLKEDFIFAPLFSFPCSLTYLHCPDPEVRKRQLTTFRQALLGRIVYAHIDWFSEDERLYYVTLQSQESVINTKCLLRTLGTQILCPEFESNISIALSEADISDTGSFALDGFIGNVEQSMGGLNEKEDFKAGFPIKTVRMEIESTHIAFVVSVLNPSNFWVRISKHQKKFEDIMKSLNTFYDVSENDELTLRNPEPGLFCCARYSKDRCFYRAIITGMNDYWINVYLLDYGSTDSIPFFDAKVLLPEFCGLPPLAMHCSLAQVSPVTDLWLQAATDYFKKIVLNKAILLQVRAKKGDKYMVTIQNIEAPENMDVVSLMLQAGYAESAEVASEDLPKSVRDCSVLKLKSKDSLHNKNVVASAPLKRPKSEKCHSEKLKENLSSNLCSEPISSQPYKAYVFKPGKLLEVNCSYCHGPGDFSCQLLCKLEDLKLLMEQIQDYYSVHPEPYQTGKIACVAKHSRDGKWYRAAILTQASEQEVELIFVDYGNQERVFIKDLCAINPHFLTLEAQAFRCCLNYLVDPTTCNLLDWTAEASRDFGNFIASCGGLLTCIVYALVLIHPRCLCNLVDLQSSLISANECFLRCSSTHSSLLSRPLPLSVSLYSYYYSSFDIKIGSEEDVYISHVYSPKKFYCQLCRNSKDLEMLETRITEMISLKMSSTYDWNRMRLCISKYIEDGLSYRALVKTTGSSSGPCVYFVDYGNEQFVEENMLCAISDQFPELLFTPMQAIQCFLSDLRDIDIPREINRWFEDSFLGKPLKAVILSRESDGQLGIDLYDGYQHINQTIKLLLNVYGENHSKEAWSVEKNQRLNQAFTVPLKESTESNCCHNAINKTSLATHSANQTDQLMHPQRVYARSLKSSICCEVEPIRKSKVKRPCKYRLKNKNGKFTLGSAHIPEESGMGLTSQKTVSKKLFQNLNQVASQRLFILHRPPVTKILQPHIDLSTHVNESAPTSYHHIPLAGNENEVIGLTSALNERTNSQKKQTSLSPLARGHIEYSSDHTMSRDITKGVLLPESFEVEVLDHGNTAIVNGCKVYSVNRELLTIPRLGMYSFLRRIRWNEPTEMCKGKIADYFSLGVINRIIACEFLKTHDEKWEVNVTCGDKCVIKKLLSWSPCSKLQELAWQTPQAISHKVSILENSHSKARRVNLYDGSVIFTSLSQQLVEIPTELVGYGQLEEAKMIYASKTGGFHLKLLKNQKTSDLAXLIPEEDNSLFLSMDNIKRGLEFLSISERXLKWYQPKTEEQWVHEKVFGFLINHGQHEVVPVNNVKVLSREIRSIXRQGMSHEWICFTYSKKMILEFIVCLFAHLKMSMTALKYLDDAWEVEMLIDSMLLCWYLNVTTSLVEENKLQSSGTVFSLESQTLLSPWVIQPFVWAPLQNGRRYGGIATVVDDPSDFCVQLEDFFDTVQYLFTLLSDLAEPLRALPLEHMIPGSNCLIKSELEGXWSRAEISQVLVQSLHLVLIDYGLSAHIPHSEAINLKSVPEKIMSLPKQSYPCSVHGVLPTTRKLWNNEARQLFQDFLCKSDLVFQFRAYGPAAVLEVDVIHKNDSGADVLVAFGLAVHPKDLAGPNGITATGSKLQSSFICPLLGKRWNKKENINYNTRKQKL
SIO_010081: Tdrd15
subclass of: SO_0000673
so part of: Tdrd15
location: complement(16505729..16511564)
location: region:16505729-16511564:-1
so has part: feature:16505729-16511564:-1:exon

XP_013206722.1
type: Protein
SIO_000068: ncbiprotein

position:16505729:-1
position: 16505729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16511564:-1
position: 16511564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16505729-16511564:-1:exon

LOC101992430
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101992430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 16563853..16564540
location: region:16563853-16564540:1
so has part: feature:16563853-16564540:1:exon

101992430
type: Gene
SIO_000068: ncbigene

position:16563853:1
position: 16563853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16564540:1
position: 16564540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16563853-16564540:1:exon

LOC101992430
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101992430
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101992430
subclass of: SO_0000673
so part of: LOC101992430
location: 16563853..16564540
location: region:16563853-16564540:1
so has part: feature:16563853-16564540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16563853-16564540:1:exon

Apob
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Apob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16581555..16619717
location: region:16581555-16619717:1
so has part: feature:16581555-16619717:1:exon
subclass of: SO_0000010

101993069
type: Gene
SIO_000068: ncbigene

position:16581555:1
position: 16581555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16619717:1
position: 16619717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16581555-16619717:1:exon

Apob
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Apob
product: apolipoprotein B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005360576.3
SIO_010081: Apob
subclass of: SO_0000673
so part of: Apob
location: join(16581555..16581636,16581978..16582016,16583066..16583181,16585220..16585365,16587383..16587536,16588205..16588360,16589860..16589984,16590619..16590704,16591994..16592213,16592955..16593182,16593423..16593540,16593649..16593795,16594467..16594678,16594928..16595165,16595600..16595776,16596473..16596664,16598387..16598554,16599028..16599239,16601847..16602029,16602634..16602755,16604117..16604327,16604814..16604989,16605101..16605288,16606166..16606311,16607762..16608135,16608631..16616079,16616613..16616727,16616837..16617020,16617882..16619717)
location: region:16581555-16619717:1
so has part: feature:16581555-16581636:1:exon
so has part: feature:16581978-16582016:1:exon
so has part: feature:16583066-16583181:1:exon
so has part: feature:16585220-16585365:1:exon
so has part: feature:16587383-16587536:1:exon
so has part: feature:16588205-16588360:1:exon
so has part: feature:16589860-16589984:1:exon
so has part: feature:16590619-16590704:1:exon
so has part: feature:16591994-16592213:1:exon
so has part: feature:16592955-16593182:1:exon
so has part: feature:16593423-16593540:1:exon
so has part: feature:16593649-16593795:1:exon
so has part: feature:16594467-16594678:1:exon
so has part: feature:16594928-16595165:1:exon
so has part: feature:16595600-16595776:1:exon
so has part: feature:16596473-16596664:1:exon
so has part: feature:16598387-16598554:1:exon
so has part: feature:16599028-16599239:1:exon
so has part: feature:16601847-16602029:1:exon
so has part: feature:16602634-16602755:1:exon
so has part: feature:16604117-16604327:1:exon
so has part: feature:16604814-16604989:1:exon
so has part: feature:16605101-16605288:1:exon
so has part: feature:16606166-16606311:1:exon
so has part: feature:16607762-16608135:1:exon
so has part: feature:16608631-16616079:1:exon
so has part: feature:16616613-16616727:1:exon
so has part: feature:16616837-16617020:1:exon
so has part: feature:16617882-16619717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16581555-16581636:1:exon

position:16581636:1
position: 16581636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16581978-16582016:1:exon

position:16581978:1
position: 16581978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16582016:1
position: 16582016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16583066-16583181:1:exon

position:16583066:1
position: 16583066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16583181:1
position: 16583181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16585220-16585365:1:exon

position:16585220:1
position: 16585220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16585365:1
position: 16585365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16587383-16587536:1:exon

position:16587383:1
position: 16587383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16587536:1
position: 16587536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16588205-16588360:1:exon

position:16588205:1
position: 16588205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16588360:1
position: 16588360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16589860-16589984:1:exon

position:16589860:1
position: 16589860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16589984:1
position: 16589984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16590619-16590704:1:exon

position:16590619:1
position: 16590619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16590704:1
position: 16590704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16591994-16592213:1:exon

position:16591994:1
position: 16591994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16592213:1
position: 16592213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16592955-16593182:1:exon

position:16592955:1
position: 16592955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16593182:1
position: 16593182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16593423-16593540:1:exon

position:16593423:1
position: 16593423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16593540:1
position: 16593540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:16593649-16593795:1:exon

position:16593649:1
position: 16593649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16593795:1
position: 16593795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16594467-16594678:1:exon

position:16594467:1
position: 16594467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16594678:1
position: 16594678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:16594928-16595165:1:exon

position:16594928:1
position: 16594928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16595165:1
position: 16595165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:16595600-16595776:1:exon

position:16595600:1
position: 16595600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16595776:1
position: 16595776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:16596473-16596664:1:exon

position:16596473:1
position: 16596473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16596664:1
position: 16596664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:16598387-16598554:1:exon

position:16598387:1
position: 16598387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16598554:1
position: 16598554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:16599028-16599239:1:exon

position:16599028:1
position: 16599028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16599239:1
position: 16599239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:16601847-16602029:1:exon

position:16601847:1
position: 16601847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16602029:1
position: 16602029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:16602634-16602755:1:exon

position:16602634:1
position: 16602634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16602755:1
position: 16602755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:16604117-16604327:1:exon

position:16604117:1
position: 16604117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16604327:1
position: 16604327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:16604814-16604989:1:exon

position:16604814:1
position: 16604814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16604989:1
position: 16604989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:16605101-16605288:1:exon

position:16605101:1
position: 16605101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16605288:1
position: 16605288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:16606166-16606311:1:exon

position:16606166:1
position: 16606166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16606311:1
position: 16606311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:16607762-16608135:1:exon

position:16607762:1
position: 16607762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16608135:1
position: 16608135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:16608631-16616079:1:exon

position:16608631:1
position: 16608631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16616079:1
position: 16616079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:16616613-16616727:1:exon

position:16616613:1
position: 16616613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16616727:1
position: 16616727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:16616837-16617020:1:exon

position:16616837:1
position: 16616837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16617020:1
position: 16617020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:16617882-16619717:1:exon

position:16617882:1
position: 16617882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Apob
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Apob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein B-100
translation: MGPRRPVLRSPLLLLFLLLFLDTSVWAQDEVLESTSSNCPKDATRFKHLRKYVYNYEAESSSGIRGTADSRSATKINCKVELEVPQLCSFIMRTTQCTLKEVYGFNPEGKALMKKTKNSDEFAAAMSRFELKLATPEGKQVVLYPDKDEPKHILNIKRGIISALLVPPETEEDKQVLLLDTVYGNCSTQVTVNSRKGTVATEMSTERNLQQCEGFQPTSTSVSPLALIKGLVRPLSTLVSSSQSCQYTLDPKRKHVSEAICNEQHLFLPFSYKNKYGIMTQVTQTLRLEDTPKINSRFFNEGTKKVGLAFESTKSTSPTKQTEAVLSTLRELKGLSVSEQNAQRANLFNKLVTELRGLSEEAVASLLPQLIGLSSPITLQALVQCGQPQCYTHILQWLKTEKAHPLLVDIVTYLVALIPNPSTQRLREIFNTAKEQQSRATLYALSHVVNNYYDADLSRSRDLQDVAGYLLKQIDNECTGNEDHTYLILRVIGNTGRTMEQVMPALKSSVLDCVRSTKPSLLIQKAAIQALRKMELGEEVQEILFDTFANGAAPVEKRLAAYLLLMRGPSSSEIRKIIELLQLEQSEQVKNFVASHIANILNSEELYVQDLKNLIESALEGSQLPTIMDFRRFSQNYQISKSVSLPSFDPVSAKVEGNLIFDPSSYLPKESMLKTTLTVFGLASADLFEIGLEGKGFEPTLEALFGKQGFFPDSVNKALYWVDGQVPDRVSKVLVDHFGYIKDDKHEQDMVNGIMPMVDKLIKELKSTEIPEARAYLRILGEELGFVKLQDLQVLGKLLLSSAQTLRGIPQMIAQAMRDGSKNDLYLHYIFMDNAFELPTGAGVQLQVSSSGVITPGTKAGVRMELANIQAELVAKPSVSVEFVTNMGIIIPDFAKSGVQMNTNFFHESGLEARVALKAGELKVTIPAPKRPVKLFSGSNTLHLVSTTKTEEIPPLIENRQSWSTCRPFFTGMNYCTTGAYSNASSTESASYYPLTGDTRYELELRPTGEVDQYSASATYQLQKEDKALVDTLKVLVQAEGVQQTEATAVFKYNRQSRTFSSEVLIPGFDVDFGTILRVNDESARDKNAYKLILDIQNKKVTEVSFVGHVSYDRKGDGKIKGVVSIPRLLAEARSEVHTHWSPTKLLFQMDSSATAYGSTISKRVAWRYDNEKIDFNWNTGTNVDTKKVASNFPVDLSSYPRTLHEYANRLLDQRVPQTDMTFRHMGSKLTAATNIWLQMASRGLPYSQMLQDHLNGLSELNLQKMGLPDFHIPDNLFLKSDGRVKYTLNKNSIKLDIPLPLSGKSSKDLKIPETVRTPALNFKSMGFQLPSQVFQLPTFTIPKTYQLQVPLLGVLDLSTNVYSNLYNWSASYTGGNTSRDHFSLRAQYRMKADSAVDLFSYSVQGSGETTFDSRNTFTLSCDGSLHHKLLDSKFKVSHVEKFGNTPVSKGLLTFEASSALGPQVSATVHLDSKKKQHLYVKDLKVDGQLRASSFYAQGKYGLSCERDPTTGQLSGESNMRFNSTYFQGTNQIVATYQDGTLSVTSTSDLQDGIFKNTASLKYENYELTLKSDSSGQYENFAASNKLDMTFSKQSASLRSEHQANYKSLSLITLLSGSLTSQGVELNADILGTDKINTGAHKATLKIARDGLSTSATTNLKYSPLVLENELNADLGLSGASMKLSTSGRFKEHHAKFNLDGKAALTEVSLGSMYQAMILGADSKNIFNFKLSREGLKLSNDMMGSYAEMKLDHTHSLSIAGLSLDFSSKMDNIYSANKFYKQNFNLHLQPYSFLTTLSHDLRYNALDLANSGQLRLEPLKLNVGGNFKGTYQNNELKHIYAISYTNLVVGSYRADTIAKVQGTEFSHRLNADIKGLASSVDVITNYNSEPLNFNNVFHFVLKPFTLGIDTHTSGDGKLALWGQHAGKLYSKFLLKAEPLALSFSHDFKGSTNHDLVYKSSISTALNHEATALLTPAEQTSTWKFETRLNDKVYRQDFEAY…
SIO_010081: Apob
subclass of: SO_0000673
so part of: Apob
location: join(16581555..16581636,16581978..16582016,16583066..16583181,16585220..16585365,16587383..16587536,16588205..16588360,16589860..16589984,16590619..16590704,16591994..16592213,16592955..16593182,16593423..16593540,16593649..16593795,16594467..16594678,16594928..16595165,16595600..16595776,16596473..16596664,16598387..16598554,16599028..16599239,16601847..16602029,16602634..16602755,16604117..16604327,16604814..16604989,16605101..16605288,16606166..16606311,16607762..16608135,16608631..16616079,16616613..16616727,16616837..16617020,16617882..16619456)
location: region:16581555-16619456:1
so has part: feature:16581555-16581636:1:exon
so has part: feature:16581978-16582016:1:exon
so has part: feature:16583066-16583181:1:exon
so has part: feature:16585220-16585365:1:exon
so has part: feature:16587383-16587536:1:exon
so has part: feature:16588205-16588360:1:exon
so has part: feature:16589860-16589984:1:exon
so has part: feature:16590619-16590704:1:exon
so has part: feature:16591994-16592213:1:exon
so has part: feature:16592955-16593182:1:exon
so has part: feature:16593423-16593540:1:exon
so has part: feature:16593649-16593795:1:exon
so has part: feature:16594467-16594678:1:exon
so has part: feature:16594928-16595165:1:exon
so has part: feature:16595600-16595776:1:exon
so has part: feature:16596473-16596664:1:exon
so has part: feature:16598387-16598554:1:exon
so has part: feature:16599028-16599239:1:exon
so has part: feature:16601847-16602029:1:exon
so has part: feature:16602634-16602755:1:exon
so has part: feature:16604117-16604327:1:exon
so has part: feature:16604814-16604989:1:exon
so has part: feature:16605101-16605288:1:exon
so has part: feature:16606166-16606311:1:exon
so has part: feature:16607762-16608135:1:exon
so has part: feature:16608631-16616079:1:exon
so has part: feature:16616613-16616727:1:exon
so has part: feature:16616837-16617020:1:exon
so has part: feature:16617882-16619456:1:exon

XP_005360633.1
type: Protein
SIO_000068: ncbiprotein

position:16619456:1
position: 16619456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16581555-16581636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16581978-16582016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16583066-16583181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16585220-16585365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16587383-16587536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16588205-16588360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16589860-16589984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16590619-16590704:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16591994-16592213:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16592955-16593182:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16593423-16593540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16593649-16593795:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16594467-16594678:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16594928-16595165:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16595600-16595776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16596473-16596664:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:16598387-16598554:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:16599028-16599239:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16601847-16602029:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:16602634-16602755:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:16604117-16604327:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:16604814-16604989:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16605101-16605288:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16606166-16606311:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16607762-16608135:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16608631-16616079:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16616613-16616727:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16616837-16617020:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:16617882-16619456:1:exon

LOC101982412
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101982412
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 16831271..16833216
location: region:16831271-16833216:1
so has part: feature:16831271-16833216:1:exon

101982412
type: Gene
SIO_000068: ncbigene

position:16831271:1
position: 16831271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16833216:1
position: 16833216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16831271-16833216:1:exon

LOC101982412
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101982412
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC101982412
subclass of: SO_0000673
so part of: LOC101982412
location: 16831271..16833216
location: region:16831271-16833216:1
so has part: feature:16831271-16833216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16831271-16833216:1:exon

Gdf7
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gdf7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16859134..16863035)
location: region:16859134-16863035:-1
so has part: feature:16859134-16863035:-1:exon
subclass of: SO_0000010

101993348
type: Gene
SIO_000068: ncbigene

position:16859134:-1
position: 16859134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16863035:-1
position: 16863035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16859134-16863035:-1:exon

Gdf7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gdf7
product: growth differentiation factor 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005360577.2
SIO_010081: Gdf7
subclass of: SO_0000673
so part of: Gdf7
location: complement(join(16859134..16860273,16862741..16863035))
location: region:16859134-16863035:-1
so has part: feature:16862741-16863035:-1:exon
so has part: feature:16859134-16860273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16862741-16863035:-1:exon

position:16862741:-1
position: 16862741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16859134-16860273:-1:exon

position:16860273:-1
position: 16860273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gdf7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gdf7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 7
translation: MDLSAAAALCLWLLSACRPRDGLEAAAVLRAAGAGPAWSSWGGGGGRTLVPARRNGSVVPHHFMMSLYRNLAGRAPAMAASGHGRGDTITGFIDHATQEELATEPGQSFLFDLSSLPDADEVVSAELRVLRRRSPEPDLDSATLPPLLQLSSCPDVTQTSHLLHSRAAEPLEVARWEEFDVTDAVQSLRREPRASRKFCLVLRAVAGTGSSPLALRQLGFGWSGGSTGDGTAAEERALLVISSRTQRKESLFREIRAQARALRAAAEPPPDPGPGAGSRKATPNGRRRRRTALAGTRGAQGSGGGGGKGHGRRGRSRCSRKPLHVDFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLLNSMAPDAAPASCCVPARLSPISILYIDAANNVVYKQYEDMVVEACGCR
SIO_010081: Gdf7
subclass of: SO_0000673
so part of: Gdf7
location: complement(join(16859309..16860273,16862741..16863035))
location: region:16859309-16863035:-1
so has part: feature:16862741-16863035:-1:exon
so has part: feature:16859309-16860273:-1:exon

XP_005360634.1
type: Protein
SIO_000068: ncbiprotein

position:16859309:-1
position: 16859309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16862741-16863035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16859309-16860273:-1:exon

Ldah
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ldah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16877689..16943581)
location: region:16877689-16943581:-1
so has part: feature:16877689-16943581:-1:exon
subclass of: SO_0000010

101993641
type: Gene
SIO_000068: ncbigene

position:16877689:-1
position: 16877689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16943581:-1
position: 16943581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16877689-16943581:-1:exon

Ldah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ldah
product: lipid droplet associated hydrolase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005360578.2
SIO_010081: Ldah
subclass of: SO_0000673
so part of: Ldah
location: complement(join(16877689..16880371,16885258..16885340,16891662..16891896,16914441..16914610,16926316..16926459,16933447..16933602,16943503..16943581))
location: region:16877689-16943581:-1
so has part: feature:16943503-16943581:-1:exon
so has part: feature:16933447-16933602:-1:exon
so has part: feature:16926316-16926459:-1:exon
so has part: feature:16914441-16914610:-1:exon
so has part: feature:16891662-16891896:-1:exon
so has part: feature:16885258-16885340:-1:exon
so has part: feature:16877689-16880371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16943503-16943581:-1:exon

position:16943503:-1
position: 16943503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16933447-16933602:-1:exon

position:16933447:-1
position: 16933447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16933602:-1
position: 16933602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16926316-16926459:-1:exon

position:16926316:-1
position: 16926316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16926459:-1
position: 16926459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16914441-16914610:-1:exon

position:16914441:-1
position: 16914441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16914610:-1
position: 16914610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16891662-16891896:-1:exon

position:16891662:-1
position: 16891662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16891896:-1
position: 16891896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16885258-16885340:-1:exon

position:16885258:-1
position: 16885258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16885340:-1
position: 16885340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16877689-16880371:-1:exon

position:16880371:-1
position: 16880371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ldah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ldah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipid droplet-associated hydrolase
translation: MDSDVQEEIPVREEFFFCGGVETQIIKCGPWTNLFDEQSVTRPKLLVFVIPGNPGFSPFYLPFAKSLYSLTKGRLPVWMISHAGFALAPKDKKILAAPEEPNAQEIEDIYGLNGQIQHKIAFLRAHVPKDVKLILIGHSIGSYIVLRVMKDAPELPVIHSFLLFPTIERMAETPNGRIATPLLCWFRYVLYATGYLVLKPCPEIIKSFLIKKALERLSFTCEIPLENLLQPFCLANAAYLGSQEMIQVRKRDDEAIKELLPKLTFYYGKTDGWCPVKYYEDMKKDFPGGDIRLCEKGISHAFVLGFSQEVAAIVADWMNNKLPKI
SIO_010081: Ldah
subclass of: SO_0000673
so part of: Ldah
location: complement(join(16880180..16880371,16885258..16885340,16891662..16891896,16914441..16914610,16926316..16926459,16933447..16933600))
location: region:16880180-16933600:-1
so has part: feature:16933447-16933600:-1:exon
so has part: feature:16926316-16926459:-1:exon
so has part: feature:16914441-16914610:-1:exon
so has part: feature:16891662-16891896:-1:exon
so has part: feature:16885258-16885340:-1:exon
so has part: feature:16880180-16880371:-1:exon

XP_005360635.1
type: Protein
SIO_000068: ncbiprotein

position:16880180:-1
position: 16880180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16933600:-1
position: 16933600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16933447-16933600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16926316-16926459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16914441-16914610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16891662-16891896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16885258-16885340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16880180-16880371:-1:exon

Hs1bp3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hs1bp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16982755..17014818
location: region:16982755-17014818:1
so has part: feature:16982755-17014818:1:exon
subclass of: SO_0000010

101993927
type: Gene
SIO_000068: ncbigene

position:16982755:1
position: 16982755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17014818:1
position: 17014818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16982755-17014818:1:exon

Hs1bp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hs1bp3
product: HCLS1 binding protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005360579.3
SIO_010081: Hs1bp3
subclass of: SO_0000673
so part of: Hs1bp3
location: join(16982755..16982801,16986346..16986511,16990387..16990594,16993036..16993252,17006835..17006989,17008211..17008334,17012663..17014818)
location: region:16982755-17014818:1
so has part: feature:16982755-16982801:1:exon
so has part: feature:16986346-16986511:1:exon
so has part: feature:16990387-16990594:1:exon
so has part: feature:16993036-16993252:1:exon
so has part: feature:17006835-17006989:1:exon
so has part: feature:17008211-17008334:1:exon
so has part: feature:17012663-17014818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16982755-16982801:1:exon

position:16982801:1
position: 16982801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16986346-16986511:1:exon

position:16986346:1
position: 16986346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16986511:1
position: 16986511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16990387-16990594:1:exon

position:16990387:1
position: 16990387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16990594:1
position: 16990594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16993036-16993252:1:exon

position:16993036:1
position: 16993036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16993252:1
position: 16993252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17006835-17006989:1:exon

position:17006835:1
position: 17006835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17006989:1
position: 17006989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17008211-17008334:1:exon

position:17008211:1
position: 17008211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17008334:1
position: 17008334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17012663-17014818:1:exon

position:17012663:1
position: 17012663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hs1bp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hs1bp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HCLS1-binding protein 3
translation: MQSPAVLVTSRQVQNVHTGLDLTVPQHQEVRGKMMSGHVEYQILVVTRLAVFKSAKHRPEDVVQFLVSKKYSEIEEFYQKLSNHYPAASLPPLPRKVLFVGESDIRERRAMFDEILRCVSKDAQLAGSPELLEFLGTRAAGAAGHATRDPSVLGDTASQPGDSDEAFDFFEQQDDVQPPTLGLSNKDVEKSLEEEEEEEALDPLGIMRSKKPKKRPEVAIRPKPSPRLTIFDEEVDPDTGLFSPGNKASPQRPLETTQDSLKLFDDPDLGGAVSLGDPLLLPTTSESGGPTSRDSSKELFRVEEDLDQILNLGSEPKPKPQTKPKPLVPAKPALPRKPTVPASVGPSETGPGPQKQQQIQAMDEMDILQYIQDHDTLTQTSPSLF
SIO_010081: Hs1bp3
subclass of: SO_0000673
so part of: Hs1bp3
location: join(16982770..16982801,16986346..16986511,16990387..16990594,16993036..16993252,17006835..17006989,17008211..17008334,17012663..17012918)
location: region:16982770-17012918:1
so has part: feature:16982770-16982801:1:exon
so has part: feature:16986346-16986511:1:exon
so has part: feature:16990387-16990594:1:exon
so has part: feature:16993036-16993252:1:exon
so has part: feature:17006835-17006989:1:exon
so has part: feature:17008211-17008334:1:exon
so has part: feature:17012663-17012918:1:exon

XP_005360636.1
type: Protein
SIO_000068: ncbiprotein

position:16982770:1
position: 16982770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17012918:1
position: 17012918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16982770-16982801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16986346-16986511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16990387-16990594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16993036-16993252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17006835-17006989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17008211-17008334:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17012663-17012918:1:exon

Rhob
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rhob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17193958..17196385)
location: region:17193958-17196385:-1
so has part: feature:17193958-17196385:-1:exon
subclass of: SO_0000010

101994216
type: Gene
SIO_000068: ncbigene

position:17193958:-1
position: 17193958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17196385:-1
position: 17196385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17193958-17196385:-1:exon

Rhob
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rhob
product: ras homolog family member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005360580.3
SIO_010081: Rhob
subclass of: SO_0000673
so part of: Rhob
location: complement(17193958..17196385)
location: region:17193958-17196385:-1
so has part: feature:17193958-17196385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17193958-17196385:-1:exon

Rhob
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rhob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoB
translation: MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQNGCINCCKVL
SIO_010081: Rhob
subclass of: SO_0000673
so part of: Rhob
location: complement(17195407..17195997)
location: region:17195407-17195997:-1
so has part: feature:17195407-17195997:-1:exon

XP_005360637.1
type: Protein
SIO_000068: ncbiprotein

position:17195407:-1
position: 17195407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17195997:-1
position: 17195997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17195407-17195997:-1:exon

LOC101994509
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101994509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17234703..17235802)
location: region:17234703-17235802:-1
so has part: feature:17234703-17235802:-1:exon
subclass of: SO_0000010

101994509
type: Gene
SIO_000068: ncbigene

position:17234703:-1
position: 17234703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17235802:-1
position: 17235802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17234703-17235802:-1:exon

LOC101994509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101994509
product: putative L-type amino acid transporter 1-like protein MLAS
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_013351270.1
SIO_010081: LOC101994509
subclass of: SO_0000673
so part of: LOC101994509
location: complement(join(17234703..17234765,17235044..17235802))
location: region:17234703-17235802:-1
so has part: feature:17235044-17235802:-1:exon
so has part: feature:17234703-17234765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17235044-17235802:-1:exon

position:17235044:-1
position: 17235044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17234703-17234765:-1:exon

position:17234765:-1
position: 17234765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101994509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101994509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative L-type amino acid transporter 1-like protein MLAS
translation: MERSEEQDGNEKPAGPEHDSGAPGLSLKREIGLWSAVSMTAGCMIGSGIFMSPQGVLVYMGSPGASLVVWATCGLLAMLGALCYAELGSLVPESGGDYAYILRTFGSLPAFLVIYMFVLVARPAAITAVSLSFAEYALAPFYPGCSSFPQITVKIVASSCILLLLLINFWSSRVSTVVMNVCTAAKVFSLLLIVVGGAVVLAQGRSRAESLLFAFHNTTQQAGRIGMAFYHGLWSFDGWNNINMVVEELKNPKGKTEIHKRGIILNSYCQHSY
SIO_010081: LOC101994509
subclass of: SO_0000673
so part of: LOC101994509
location: complement(join(17234703..17234765,17235044..17235802))
location: region:17234703-17235802:-1
so has part: feature:17235044-17235802:-1:exon
so has part: feature:17234703-17234765:-1:exon

XP_013206724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17235044-17235802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17234703-17234765:-1:exon

LOC101994800
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101994800
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 17247863..17248696
location: region:17247863-17248696:1
so has part: feature:17247863-17248696:1:exon

101994800
type: Gene
SIO_000068: ncbigene

position:17247863:1
position: 17247863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17248696:1
position: 17248696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17247863-17248696:1:exon

LOC101994800
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101994800
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101994800
subclass of: SO_0000673
so part of: LOC101994800
location: 17247863..17248696
location: region:17247863-17248696:1
so has part: feature:17247863-17248696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17247863-17248696:1:exon

Pum2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pum2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17281734..17362204
location: region:17281734-17362204:1
so has part: feature:17281734-17362204:1:exon
subclass of: SO_0000010

101995093
type: Gene
SIO_000068: ncbigene

position:17281734:1
position: 17281734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17362204:1
position: 17362204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17281734-17362204:1:exon

Pum2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pum2
product: pumilio RNA binding family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_026785888.1
SIO_010081: Pum2
subclass of: SO_0000673
so part of: Pum2
location: join(17281734..17281998,17301197..17301265,17309543..17309651,17312636..17312823,17313597..17313763,17316542..17316812,17317025..17317118,17320774..17320899,17324024..17324166,17326217..17326349,17330349..17330492,17330611..17330901,17335453..17335689,17349995..17350262,17350598..17350727,17351985..17352119,17354733..17354870,17355675..17355800,17355953..17356074,17356484..17356676,17359291..17362204)
location: region:17281734-17362204:1
so has part: feature:17281734-17281998:1:exon
so has part: feature:17301197-17301265:1:exon
so has part: feature:17309543-17309651:1:exon
so has part: feature:17312636-17312823:1:exon
so has part: feature:17313597-17313763:1:exon
so has part: feature:17316542-17316812:1:exon
so has part: feature:17317025-17317118:1:exon
so has part: feature:17320774-17320899:1:exon
so has part: feature:17324024-17324166:1:exon
so has part: feature:17326217-17326349:1:exon
so has part: feature:17330349-17330492:1:exon
so has part: feature:17330611-17330901:1:exon
so has part: feature:17335453-17335689:1:exon
so has part: feature:17349995-17350262:1:exon
so has part: feature:17350598-17350727:1:exon
so has part: feature:17351985-17352119:1:exon
so has part: feature:17354733-17354870:1:exon
so has part: feature:17355675-17355800:1:exon
so has part: feature:17355953-17356074:1:exon
so has part: feature:17356484-17356676:1:exon
so has part: feature:17359291-17362204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17281734-17281998:1:exon

position:17281998:1
position: 17281998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17301197-17301265:1:exon

position:17301197:1
position: 17301197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17301265:1
position: 17301265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17309543-17309651:1:exon

position:17309543:1
position: 17309543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17309651:1
position: 17309651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17312636-17312823:1:exon

position:17312636:1
position: 17312636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17312823:1
position: 17312823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17313597-17313763:1:exon

position:17313597:1
position: 17313597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17313763:1
position: 17313763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17316542-17316812:1:exon

position:17316542:1
position: 17316542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17316812:1
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SIO_000300: 7
SIO_000628: feature:17317025-17317118:1:exon

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SIO_000300: 8
SIO_000628: feature:17320774-17320899:1:exon

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SIO_000300: 9
SIO_000628: feature:17324024-17324166:1:exon

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SIO_000300: 10
SIO_000628: feature:17326217-17326349:1:exon

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SIO_000300: 11
SIO_000628: feature:17330349-17330492:1:exon

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SIO_000300: 12
SIO_000628: feature:17330611-17330901:1:exon

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position:17330901:1
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SIO_000300: 13
SIO_000628: feature:17335453-17335689:1:exon

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SIO_000300: 14
SIO_000628: feature:17349995-17350262:1:exon

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SIO_000300: 15
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SIO_000300: 16
SIO_000628: feature:17351985-17352119:1:exon

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SIO_000300: 17
SIO_000628: feature:17354733-17354870:1:exon

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SIO_000300: 18
SIO_000628: feature:17355675-17355800:1:exon

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SIO_000300: 19
SIO_000628: feature:17355953-17356074:1:exon

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SIO_000300: 20
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SIO_000300: 21
SIO_000628: feature:17359291-17362204:1:exon

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Pum2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pum2
product: pumilio RNA binding family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026785889.1
SIO_010081: Pum2
subclass of: SO_0000673
so part of: Pum2
location: join(17281734..17281998,17301197..17301265,17309543..17309651,17312636..17312823,17313597..17313763,17316542..17316812,17317025..17317118,17320774..17320899,17324024..17324166,17326217..17326349,17330349..17330492,17330611..17330901,17335453..17335689,17349995..17350262,17350598..17350727,17351985..17352113,17354733..17354870,17355675..17355800,17355953..17356074,17356484..17356676,17359291..17362204)
location: region:17281734-17362204:1
so has part: feature:17281734-17281998:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:17281734-17281998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17301197-17301265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17309543-17309651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17312636-17312823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17313597-17313763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17316542-17316812:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17317025-17317118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17320774-17320899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17324024-17324166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17326217-17326349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17330349-17330492:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17330611-17330901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17335453-17335689:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17349995-17350262:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17350598-17350727:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17351985-17352113:1:exon

position:17352113:1
position: 17352113
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:17354733-17354870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17355675-17355800:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17355953-17356074:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17356484-17356676:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17359291-17362204:1:exon

Pum2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pum2
product: pumilio RNA binding family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_013351271.2
SIO_010081: Pum2
subclass of: SO_0000673
so part of: Pum2
location: join(17281734..17281998,17301197..17301265,17309543..17309651,17312636..17312823,17313597..17313763,17316542..17316812,17317025..17317118,17320774..17320899,17324024..17324166,17326217..17326349,17330349..17330492,17330614..17330901,17335453..17335689,17349995..17350262,17350598..17350727,17351985..17352119,17354733..17354870,17355675..17355800,17355953..17356074,17356484..17356676,17359291..17362204)
location: region:17281734-17362204:1
so has part: feature:17281734-17281998:1:exon
so has part: feature:17301197-17301265:1:exon
so has part: feature:17309543-17309651:1:exon
so has part: feature:17312636-17312823:1:exon
so has part: feature:17313597-17313763:1:exon
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so has part: feature:17349995-17350262:1:exon
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so has part: feature:17351985-17352119:1:exon
so has part: feature:17354733-17354870:1:exon
so has part: feature:17355675-17355800:1:exon
so has part: feature:17355953-17356074:1:exon
so has part: feature:17356484-17356676:1:exon
so has part: feature:17359291-17362204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17281734-17281998:1:exon