Microtus ochrogaster isolate Prairie Vole_2 chromosome 24, MicOch1.0, whole genome shotgun sequence.
type: Entry
definition: Microtus ochrogaster isolate Prairie Vole_2 chromosome 24, MicOch1.0, whole genome shotgun sequence.
sequence version: NC_022024.1
sequence date: 2018-10-15
sequence: sequence
division: CON
label: NC_022024.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210839
dblink: SAMN00727831
keyword: WGS
keyword: RefSeq
source: Microtus ochrogaster (prairie vole)
organism: Microtus ochrogaster
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Arvicolinae; Microtus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001687.1.\nAssembly name: MicOch1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/12/07. The original whole-genome shotgun project has the\naccession AHZW00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: allpaths v. R41985 HAPLOIDIFY=True\n SPRS_WRITE_SEPS=True\nAssembly Name :: MicOch1.0\nGenome Coverage :: 94x\nSequencing Technology :: Illumina Hi-Seq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Microtus ochrogaster Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 37156218
topology: linear
so has quality: SO_0000987
location: 1..37156218
location: region:1-37156218:1
RO_0002162: 79684

NC_022024
type: RefSeq
SIO_000068: refseq

PRJNA210839
type: BioProject
SIO_000068: bioproject

SAMN00727831
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37156218:1
position: 37156218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-37156218:1:source
so part of: sequence
organism: Microtus ochrogaster
mol type: genomic DNA
isolate: Prairie Vole_2
chromosome: 24
sex: female

79684
type: Taxonomy
SIO_000068: taxonomy

Cpm
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cpm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193927..252162
location: region:193927-252162:1
so has part: feature:193927-252162:1:exon
subclass of: SO_0000010

102000813
type: Gene
SIO_000068: ncbigene

position:193927:1
position: 193927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252162:1
position: 252162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193927-252162:1:exon

Cpm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cpm
product: carboxypeptidase M, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005357896.2
SIO_010081: Cpm
subclass of: SO_0000673
so part of: Cpm
location: join(193927..193948,194141..194303,224538..224635,236898..237070,238704..238888,240699..240869,243024..243176,246781..246929,248798..252162)
location: region:193927-252162:1
so has part: feature:193927-193948:1:exon
so has part: feature:194141-194303:1:exon
so has part: feature:224538-224635:1:exon
so has part: feature:236898-237070:1:exon
so has part: feature:238704-238888:1:exon
so has part: feature:240699-240869:1:exon
so has part: feature:243024-243176:1:exon
so has part: feature:246781-246929:1:exon
so has part: feature:248798-252162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193927-193948:1:exon

position:193948:1
position: 193948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194141-194303:1:exon

position:194141:1
position: 194141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194303:1
position: 194303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:224538-224635:1:exon

position:224538:1
position: 224538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224635:1
position: 224635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236898-237070:1:exon

position:236898:1
position: 236898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237070:1
position: 237070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:238704-238888:1:exon

position:238704:1
position: 238704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238888:1
position: 238888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:240699-240869:1:exon

position:240699:1
position: 240699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240869:1
position: 240869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:243024-243176:1:exon

position:243024:1
position: 243024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243176:1
position: 243176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:246781-246929:1:exon

position:246781:1
position: 246781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246929:1
position: 246929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:248798-252162:1:exon

position:248798:1
position: 248798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cpm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cpm
product: carboxypeptidase M, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026784595.1
SIO_010081: Cpm
subclass of: SO_0000673
so part of: Cpm
location: join(194027..194055,194141..194303,224538..224635,236898..237070,238704..238888,240699..240869,243024..243176,246781..246929,248798..252162)
location: region:194027-252162:1
so has part: feature:194027-194055:1:exon
so has part: feature:194141-194303:1:exon
so has part: feature:224538-224635:1:exon
so has part: feature:236898-237070:1:exon
so has part: feature:238704-238888:1:exon
so has part: feature:240699-240869:1:exon
so has part: feature:243024-243176:1:exon
so has part: feature:246781-246929:1:exon
so has part: feature:248798-252162:1:exon

position:194027:1
position: 194027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194027-194055:1:exon

position:194055:1
position: 194055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194141-194303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224538-224635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236898-237070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238704-238888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240699-240869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243024-243176:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246781-246929:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:248798-252162:1:exon

Cpm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cpm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase M
translation: MDLAVLWLGLLLPVVTALDFRYHHQEEMEAFLKSVAQNYSSITHLHSIGKSVKGRNLWVLVVGQSPKEHRVGIPEFKYVANMHGDETVGRELLLHLIDYLVRSHGNDADITHLINSTRIHIMPSMNPDGFEAVKKPDCYYSNGRENFNNYDLNRNFPDAFESNNVSKQPETLAVMKWLKTETFVLSANLHGGALVASYPFDNGVQATGTLLSRSLTPDDDVFQHLAYTYASRNPNMTKGDQCKNKRHFPNGIINGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPLFWSDNRASLIEYIRQVHLGIKGQVFDQSGNPLPNVIVEVQDRKHICPFRTNKLGEYYLLLLPGSYVINVTVPGHDPHLTKLTIPRKSQTFSALKQDFHLPLRGRLDPMLVSEPSCPTIPLYKLRPNRSAATKPSLFLFFVILWNVFFK
SIO_010081: Cpm
subclass of: SO_0000673
so part of: Cpm
location: join(194144..194303,224538..224635,236898..237070,238704..238888,240699..240869,243024..243176,246781..246929,248798..249040)
location: region:194144-249040:1
so has part: feature:194144-194303:1:exon
so has part: feature:224538-224635:1:exon
so has part: feature:236898-237070:1:exon
so has part: feature:238704-238888:1:exon
so has part: feature:240699-240869:1:exon
so has part: feature:243024-243176:1:exon
so has part: feature:246781-246929:1:exon
so has part: feature:248798-249040:1:exon

XP_026640396.1
type: Protein
SIO_000068: ncbiprotein

position:194144:1
position: 194144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249040:1
position: 249040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194144-194303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224538-224635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236898-237070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238704-238888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240699-240869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243024-243176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246781-246929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:248798-249040:1:exon

Cpm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cpm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase M
translation: MDLAVLWLGLLLPVVTALDFRYHHQEEMEAFLKSVAQNYSSITHLHSIGKSVKGRNLWVLVVGQSPKEHRVGIPEFKYVANMHGDETVGRELLLHLIDYLVRSHGNDADITHLINSTRIHIMPSMNPDGFEAVKKPDCYYSNGRENFNNYDLNRNFPDAFESNNVSKQPETLAVMKWLKTETFVLSANLHGGALVASYPFDNGVQATGTLLSRSLTPDDDVFQHLAYTYASRNPNMTKGDQCKNKRHFPNGIINGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPLFWSDNRASLIEYIRQVHLGIKGQVFDQSGNPLPNVIVEVQDRKHICPFRTNKLGEYYLLLLPGSYVINVTVPGHDPHLTKLTIPRKSQTFSALKQDFHLPLRGRLDPMLVSEPSCPTIPLYKLRPNRSAATKPSLFLFFVILWNVFFK
SIO_010081: Cpm
subclass of: SO_0000673
so part of: Cpm
location: join(194144..194303,224538..224635,236898..237070,238704..238888,240699..240869,243024..243176,246781..246929,248798..249040)
location: region:194144-249040:1
so has part: feature:194144-194303:1:exon
so has part: feature:224538-224635:1:exon
so has part: feature:236898-237070:1:exon
so has part: feature:238704-238888:1:exon
so has part: feature:240699-240869:1:exon
so has part: feature:243024-243176:1:exon
so has part: feature:246781-246929:1:exon
so has part: feature:248798-249040:1:exon

XP_005357953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194144-194303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224538-224635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236898-237070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238704-238888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240699-240869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243024-243176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246781-246929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:248798-249040:1:exon

Mdm2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(256376..279415)
location: region:256376-279415:-1
so has part: feature:256376-279415:-1:exon
subclass of: SO_0000010

102001095
type: Gene
SIO_000068: ncbigene

position:256376:-1
position: 256376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279415:-1
position: 279415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256376-279415:-1:exon

Mdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm2
product: MDM2 proto-oncogene, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005357897.2
SIO_010081: Mdm2
subclass of: SO_0000673
so part of: Mdm2
location: complement(join(256376..258909,259756..259833,260955..261110,263115..263263,263941..264037,264370..264434,270521..270570,270941..271074,274155..274229,278588..278672,278821..278895,279269..279415))
location: region:256376-279415:-1
so has part: feature:279269-279415:-1:exon
so has part: feature:278821-278895:-1:exon
so has part: feature:278588-278672:-1:exon
so has part: feature:274155-274229:-1:exon
so has part: feature:270941-271074:-1:exon
so has part: feature:270521-270570:-1:exon
so has part: feature:264370-264434:-1:exon
so has part: feature:263941-264037:-1:exon
so has part: feature:263115-263263:-1:exon
so has part: feature:260955-261110:-1:exon
so has part: feature:259756-259833:-1:exon
so has part: feature:256376-258909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279269-279415:-1:exon

position:279269:-1
position: 279269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278821-278895:-1:exon

position:278821:-1
position: 278821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278895:-1
position: 278895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278588-278672:-1:exon

position:278588:-1
position: 278588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278672:-1
position: 278672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274155-274229:-1:exon

position:274155:-1
position: 274155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274229:-1
position: 274229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270941-271074:-1:exon

position:270941:-1
position: 270941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271074:-1
position: 271074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270521-270570:-1:exon

position:270521:-1
position: 270521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270570:-1
position: 270570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264370-264434:-1:exon

position:264370:-1
position: 264370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264434:-1
position: 264434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:263941-264037:-1:exon

position:263941:-1
position: 263941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264037:-1
position: 264037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263115-263263:-1:exon

position:263115:-1
position: 263115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263263:-1
position: 263263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:260955-261110:-1:exon

position:260955:-1
position: 260955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261110:-1
position: 261110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:259756-259833:-1:exon

position:259756:-1
position: 259756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259833:-1
position: 259833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:256376-258909:-1:exon

position:258909:-1
position: 258909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm2
product: MDM2 proto-oncogene, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026784548.1
SIO_010081: Mdm2
subclass of: SO_0000673
so part of: Mdm2
location: complement(join(256376..258909,259756..259833,260955..261110,263115..263263,263941..264037,264370..264434,270521..270570,270941..271074,274155..274229,278588..278672,278821..278927,279269..279415))
location: region:256376-279415:-1
so has part: feature:279269-279415:-1:exon
so has part: feature:278821-278927:-1:exon
so has part: feature:278588-278672:-1:exon
so has part: feature:274155-274229:-1:exon
so has part: feature:270941-271074:-1:exon
so has part: feature:270521-270570:-1:exon
so has part: feature:264370-264434:-1:exon
so has part: feature:263941-264037:-1:exon
so has part: feature:263115-263263:-1:exon
so has part: feature:260955-261110:-1:exon
so has part: feature:259756-259833:-1:exon
so has part: feature:256376-258909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279269-279415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278821-278927:-1:exon

position:278927:-1
position: 278927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278588-278672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274155-274229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270941-271074:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270521-270570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264370-264434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263941-264037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263115-263263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260955-261110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259756-259833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256376-258909:-1:exon

Mdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm2
product: MDM2 proto-oncogene, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_013350275.2
SIO_010081: Mdm2
subclass of: SO_0000673
so part of: Mdm2
location: complement(join(256376..258909,259756..259833,260955..261110,263115..263263,263941..264037,264370..264434,270521..270570,270941..271074,274155..274229,278588..278672,278821..278982,279269..279415))
location: region:256376-279415:-1
so has part: feature:279269-279415:-1:exon
so has part: feature:278821-278982:-1:exon
so has part: feature:278588-278672:-1:exon
so has part: feature:274155-274229:-1:exon
so has part: feature:270941-271074:-1:exon
so has part: feature:270521-270570:-1:exon
so has part: feature:264370-264434:-1:exon
so has part: feature:263941-264037:-1:exon
so has part: feature:263115-263263:-1:exon
so has part: feature:260955-261110:-1:exon
so has part: feature:259756-259833:-1:exon
so has part: feature:256376-258909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279269-279415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278821-278982:-1:exon

position:278982:-1
position: 278982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278588-278672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274155-274229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270941-271074:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270521-270570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264370-264434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263941-264037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263115-263263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260955-261110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259756-259833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256376-258909:-1:exon

Mdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Mdm2
translation: MCNTNMSVSTDGAVSTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEIIFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVVSQQESSDSGTSSESRCQPAGGSDQEDPVREPQEEKPSSSDSFSRPSTSSRRRAISETEENSDELPGERQRKRHRSLSFDESLALCVLREICCERSSSSESTETPSHQDLDDGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEDGHELSDEDDEVYRVTVYQTGESDTDSFEGDPEISLADYWKCTSCNEMNPPLPSHCNRCWTLRENWLPEDKKDKGEILEKGKLETLTQAEEGLDVPDGKKSTVNDSKEPCTEEDDDKEVHASPSQESEDYSQPSTSSSVVYSSQEDVREVEKEETQDKEESMESGFSLNATEPCVICQGRPKNGCIVHGKTGHLMSCFTCAKKLKKRNKPCPVCRQPIQMIVLTYFS
SIO_010081: Mdm2
subclass of: SO_0000673
so part of: Mdm2
location: complement(join(258337..258909,259756..259833,260955..261110,263115..263263,263941..264037,264370..264434,270521..270570,270941..271074,274155..274229,278588..278668))
location: region:258337-278668:-1
so has part: feature:278588-278668:-1:exon
so has part: feature:274155-274229:-1:exon
so has part: feature:270941-271074:-1:exon
so has part: feature:270521-270570:-1:exon
so has part: feature:264370-264434:-1:exon
so has part: feature:263941-264037:-1:exon
so has part: feature:263115-263263:-1:exon
so has part: feature:260955-261110:-1:exon
so has part: feature:259756-259833:-1:exon
so has part: feature:258337-258909:-1:exon

XP_026640349.1
type: Protein
SIO_000068: ncbiprotein

position:258337:-1
position: 258337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278668:-1
position: 278668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278588-278668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274155-274229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270941-271074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270521-270570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264370-264434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263941-264037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263115-263263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260955-261110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259756-259833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258337-258909:-1:exon

Mdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Mdm2
translation: MCNTNMSVSTDGAVSTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEIIFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVVSQQESSDSGTSSESRCQPAGGSDQEDPVREPQEEKPSSSDSFSRPSTSSRRRAISETEENSDELPGERQRKRHRSLSFDESLALCVLREICCERSSSSESTETPSHQDLDDGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEDGHELSDEDDEVYRVTVYQTGESDTDSFEGDPEISLADYWKCTSCNEMNPPLPSHCNRCWTLRENWLPEDKKDKGEILEKGKLETLTQAEEGLDVPDGKKSTVNDSKEPCTEEDDDKEVHASPSQESEDYSQPSTSSSVVYSSQEDVREVEKEETQDKEESMESGFSLNATEPCVICQGRPKNGCIVHGKTGHLMSCFTCAKKLKKRNKPCPVCRQPIQMIVLTYFS
SIO_010081: Mdm2
subclass of: SO_0000673
so part of: Mdm2
location: complement(join(258337..258909,259756..259833,260955..261110,263115..263263,263941..264037,264370..264434,270521..270570,270941..271074,274155..274229,278588..278668))
location: region:258337-278668:-1
so has part: feature:278588-278668:-1:exon
so has part: feature:274155-274229:-1:exon
so has part: feature:270941-271074:-1:exon
so has part: feature:270521-270570:-1:exon
so has part: feature:264370-264434:-1:exon
so has part: feature:263941-264037:-1:exon
so has part: feature:263115-263263:-1:exon
so has part: feature:260955-261110:-1:exon
so has part: feature:259756-259833:-1:exon
so has part: feature:258337-258909:-1:exon

XP_005357954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278588-278668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274155-274229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270941-271074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270521-270570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264370-264434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263941-264037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263115-263263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260955-261110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259756-259833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258337-258909:-1:exon

Mdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Mdm2
translation: MCNTNMSVSTDGAVSTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEIIFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVVSQQESSDSGTSSESRCQPAGGSDQEDPVREPQEEKPSSSDSFSRPSTSSRRRAISETEENSDELPGERQRKRHRSLSFDESLALCVLREICCERSSSSESTETPSHQDLDDGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEDGHELSDEDDEVYRVTVYQTGESDTDSFEGDPEISLADYWKCTSCNEMNPPLPSHCNRCWTLRENWLPEDKKDKGEILEKGKLETLTQAEEGLDVPDGKKSTVNDSKEPCTEEDDDKEVHASPSQESEDYSQPSTSSSVVYSSQEDVREVEKEETQDKEESMESGFSLNATEPCVICQGRPKNGCIVHGKTGHLMSCFTCAKKLKKRNKPCPVCRQPIQMIVLTYFS
SIO_010081: Mdm2
subclass of: SO_0000673
so part of: Mdm2
location: complement(join(258337..258909,259756..259833,260955..261110,263115..263263,263941..264037,264370..264434,270521..270570,270941..271074,274155..274229,278588..278668))
location: region:258337-278668:-1
so has part: feature:278588-278668:-1:exon
so has part: feature:274155-274229:-1:exon
so has part: feature:270941-271074:-1:exon
so has part: feature:270521-270570:-1:exon
so has part: feature:264370-264434:-1:exon
so has part: feature:263941-264037:-1:exon
so has part: feature:263115-263263:-1:exon
so has part: feature:260955-261110:-1:exon
so has part: feature:259756-259833:-1:exon
so has part: feature:258337-258909:-1:exon

XP_013205729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278588-278668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274155-274229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270941-271074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270521-270570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264370-264434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263941-264037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263115-263263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260955-261110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259756-259833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258337-258909:-1:exon

LOC113457389
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457389
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 266764..266875
location: region:266764-266875:1
so has part: feature:266764-266875:1:exon
subclass of: SO_0000623

113457389
type: Gene
SIO_000068: ncbigene

position:266764:1
position: 266764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266875:1
position: 266875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266764-266875:1:exon

LOC113457389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457389
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377977.1
SIO_010081: LOC113457389
subclass of: SO_0000673
so part of: LOC113457389
location: 266764..266875
location: region:266764-266875:1
so has part: feature:266764-266875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266764-266875:1:exon

Slc35e3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc35e3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311477..328857)
location: region:311477-328857:-1
so has part: feature:311477-328857:-1:exon
subclass of: SO_0000010

101986004
type: Gene
SIO_000068: ncbigene

position:311477:-1
position: 311477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328857:-1
position: 328857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311477-328857:-1:exon

Slc35e3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc35e3
product: solute carrier family 35 member E3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784627.1
SIO_010081: Slc35e3
subclass of: SO_0000673
so part of: Slc35e3
location: complement(join(311477..312263,321267..321425,327386..327496,328294..328857))
location: region:311477-328857:-1
so has part: feature:328294-328857:-1:exon
so has part: feature:327386-327496:-1:exon
so has part: feature:321267-321425:-1:exon
so has part: feature:311477-312263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328294-328857:-1:exon

position:328294:-1
position: 328294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327386-327496:-1:exon

position:327386:-1
position: 327386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327496:-1
position: 327496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321267-321425:-1:exon

position:321267:-1
position: 321267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321425:-1
position: 321425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311477-312263:-1:exon

position:312263:-1
position: 312263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc35e3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc35e3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member E3
translation: MASLADRVRGNGRIAAGLLFNLLVSICIVFLNKWIYVHHGFPNMSLTLVHFVVTWLGLYVCQKLDIFAPKSLPLSKLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKSFSVRIQLTMIPITLGVILNSYYDVKFHALGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFGEGGIFGPWSVSALHLADCFFVSLSEHLSYNMFGHFKFCITLCGGYVLFKDPLSVNQGLGILCTLFGILTYTHLKLSEQEGSKSKLVQRP
SIO_010081: Slc35e3
subclass of: SO_0000673
so part of: Slc35e3
location: complement(join(312033..312263,321267..321425,327386..327496,328294..328695))
location: region:312033-328695:-1
so has part: feature:328294-328695:-1:exon
so has part: feature:327386-327496:-1:exon
so has part: feature:321267-321425:-1:exon
so has part: feature:312033-312263:-1:exon

XP_026640428.1
type: Protein
SIO_000068: ncbiprotein

position:312033:-1
position: 312033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328695:-1
position: 328695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328294-328695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327386-327496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321267-321425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312033-312263:-1:exon

Nup107
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Nup107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(330537..375540)
location: region:330537-375540:-1
so has part: feature:330537-375540:-1:exon
subclass of: SO_0000010

102001752
type: Gene
SIO_000068: ncbigene

position:330537:-1
position: 330537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375540:-1
position: 375540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330537-375540:-1:exon

Nup107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nup107
product: nucleoporin 107, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_026784578.1
SIO_010081: Nup107
subclass of: SO_0000673
so part of: Nup107
location: complement(join(330537..330842,331413..331580,335564..335677,337431..337591,341760..341862,342443..342555,344094..344244,344727..344765,345786..345904,346178..346247,349776..349824,349933..350078,350656..350715,352352..352428,352564..352657,353504..353617,356345..356423,358969..359057,359444..359515,361808..361856,362435..362562,365560..365663,369456..369600,371901..372016,373284..373370,373778..373869,375434..375540))
location: region:330537-375540:-1
so has part: feature:375434-375540:-1:exon
so has part: feature:373778-373869:-1:exon
so has part: feature:373284-373370:-1:exon
so has part: feature:371901-372016:-1:exon
so has part: feature:369456-369600:-1:exon
so has part: feature:365560-365663:-1:exon
so has part: feature:362435-362562:-1:exon
so has part: feature:361808-361856:-1:exon
so has part: feature:359444-359515:-1:exon
so has part: feature:358969-359057:-1:exon
so has part: feature:356345-356423:-1:exon
so has part: feature:353504-353617:-1:exon
so has part: feature:352564-352657:-1:exon
so has part: feature:352352-352428:-1:exon
so has part: feature:350656-350715:-1:exon
so has part: feature:349933-350078:-1:exon
so has part: feature:349776-349824:-1:exon
so has part: feature:346178-346247:-1:exon
so has part: feature:345786-345904:-1:exon
so has part: feature:344727-344765:-1:exon
so has part: feature:344094-344244:-1:exon
so has part: feature:342443-342555:-1:exon
so has part: feature:341760-341862:-1:exon
so has part: feature:337431-337591:-1:exon
so has part: feature:335564-335677:-1:exon
so has part: feature:331413-331580:-1:exon
so has part: feature:330537-330842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375540:-1:exon

position:375434:-1
position: 375434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373778-373869:-1:exon

position:373778:-1
position: 373778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373869:-1
position: 373869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373284-373370:-1:exon

position:373284:-1
position: 373284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373370:-1
position: 373370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371901-372016:-1:exon

position:371901:-1
position: 371901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372016:-1
position: 372016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369456-369600:-1:exon

position:369456:-1
position: 369456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369600:-1
position: 369600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:365560-365663:-1:exon

position:365560:-1
position: 365560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365663:-1
position: 365663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:362435-362562:-1:exon

position:362435:-1
position: 362435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362562:-1
position: 362562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:361808-361856:-1:exon

position:361808:-1
position: 361808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361856:-1
position: 361856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:359444-359515:-1:exon

position:359444:-1
position: 359444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359515:-1
position: 359515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:358969-359057:-1:exon

position:358969:-1
position: 358969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359057:-1
position: 359057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:356345-356423:-1:exon

position:356345:-1
position: 356345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356423:-1
position: 356423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:353504-353617:-1:exon

position:353504:-1
position: 353504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353617:-1
position: 353617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:352564-352657:-1:exon

position:352564:-1
position: 352564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352657:-1
position: 352657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:352352-352428:-1:exon

position:352352:-1
position: 352352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352428:-1
position: 352428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:350656-350715:-1:exon

position:350656:-1
position: 350656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350715:-1
position: 350715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:349933-350078:-1:exon

position:349933:-1
position: 349933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350078:-1
position: 350078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:349776-349824:-1:exon

position:349776:-1
position: 349776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349824:-1
position: 349824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:346178-346247:-1:exon

position:346178:-1
position: 346178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346247:-1
position: 346247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:345786-345904:-1:exon

position:345786:-1
position: 345786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345904:-1
position: 345904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:344727-344765:-1:exon

position:344727:-1
position: 344727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344765:-1
position: 344765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:344094-344244:-1:exon

position:344094:-1
position: 344094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344244:-1
position: 344244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:342443-342555:-1:exon

position:342443:-1
position: 342443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342555:-1
position: 342555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:341760-341862:-1:exon

position:341760:-1
position: 341760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341862:-1
position: 341862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:337431-337591:-1:exon

position:337431:-1
position: 337431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337591:-1
position: 337591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:335564-335677:-1:exon

position:335564:-1
position: 335564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335677:-1
position: 335677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:331413-331580:-1:exon

position:331413:-1
position: 331413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331580:-1
position: 331580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:330537-330842:-1:exon

position:330842:-1
position: 330842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nup107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nup107
product: nucleoporin 107, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013350278.1
SIO_010081: Nup107
subclass of: SO_0000673
so part of: Nup107
location: complement(join(330537..330842,331413..331580,335564..335677,336347..336472,337431..337591,341760..341862,342443..342555,344094..344244,344727..344765,345786..345904,346178..346247,349776..349824,349933..350078,350656..350715,352352..352428,352564..352657,353504..353617,356345..356423,358969..359057,359444..359515,361808..361856,362435..362562,365560..365663,369456..369600,371901..372016,373284..373370,373778..373869,375434..375540))
location: region:330537-375540:-1
so has part: feature:375434-375540:-1:exon
so has part: feature:373778-373869:-1:exon
so has part: feature:373284-373370:-1:exon
so has part: feature:371901-372016:-1:exon
so has part: feature:369456-369600:-1:exon
so has part: feature:365560-365663:-1:exon
so has part: feature:362435-362562:-1:exon
so has part: feature:361808-361856:-1:exon
so has part: feature:359444-359515:-1:exon
so has part: feature:358969-359057:-1:exon
so has part: feature:356345-356423:-1:exon
so has part: feature:353504-353617:-1:exon
so has part: feature:352564-352657:-1:exon
so has part: feature:352352-352428:-1:exon
so has part: feature:350656-350715:-1:exon
so has part: feature:349933-350078:-1:exon
so has part: feature:349776-349824:-1:exon
so has part: feature:346178-346247:-1:exon
so has part: feature:345786-345904:-1:exon
so has part: feature:344727-344765:-1:exon
so has part: feature:344094-344244:-1:exon
so has part: feature:342443-342555:-1:exon
so has part: feature:341760-341862:-1:exon
so has part: feature:337431-337591:-1:exon
so has part: feature:336347-336472:-1:exon
so has part: feature:335564-335677:-1:exon
so has part: feature:331413-331580:-1:exon
so has part: feature:330537-330842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373778-373869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373284-373370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371901-372016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369456-369600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365560-365663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362435-362562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:361808-361856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359444-359515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358969-359057:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356345-356423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353504-353617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352564-352657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352352-352428:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350656-350715:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349933-350078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349776-349824:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:346178-346247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:345786-345904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:344727-344765:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:344094-344244:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342443-342555:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341760-341862:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:337431-337591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336347-336472:-1:exon

position:336347:-1
position: 336347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336472:-1
position: 336472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:335564-335677:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:331413-331580:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:330537-330842:-1:exon

Nup107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nup107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup107 isoform X2
translation: MDRSIFGEMSSPVIREAEVTRTARKQSAQKRVLIQSNQDENFGNTTPRSQMIPRTPSSFRQPFTPPNRSLLKHPDISCILGTDGRSPRHTQSSGFLGNLSMVTNLDDSNWATAFSSQRSGFYTNLEPHSVTEDVNLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMFAVAAVNASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENTLHTLKQRQLLSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGSGTELEPVEGNPYRRIWKISCWRMAEDELFNKYERAIYASLSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVVTLDETEELPREYTEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRSNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLISEKHTNLIAFYTCHLPQDLAVAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDLAPSLDTGTTEEDRVKVDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSIAEIYNQWEEQGLESPLPAEDDNAIREHLCIRAYLMDHSIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDPERTHQMALLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKLLQKLRESSLMLLDQGLDPLGYEAQS
SIO_010081: Nup107
subclass of: SO_0000673
so part of: Nup107
location: complement(join(330735..330842,331413..331580,335564..335677,337431..337591,341760..341862,342443..342555,344094..344244,344727..344765,345786..345904,346178..346247,349776..349824,349933..350078,350656..350715,352352..352428,352564..352657,353504..353617,356345..356423,358969..359057,359444..359515,361808..361856,362435..362562,365560..365663,369456..369600,371901..372016,373284..373370,373778..373869,375434..375441))
location: region:330735-375441:-1
so has part: feature:375434-375441:-1:exon
so has part: feature:373778-373869:-1:exon
so has part: feature:373284-373370:-1:exon
so has part: feature:371901-372016:-1:exon
so has part: feature:369456-369600:-1:exon
so has part: feature:365560-365663:-1:exon
so has part: feature:362435-362562:-1:exon
so has part: feature:361808-361856:-1:exon
so has part: feature:359444-359515:-1:exon
so has part: feature:358969-359057:-1:exon
so has part: feature:356345-356423:-1:exon
so has part: feature:353504-353617:-1:exon
so has part: feature:352564-352657:-1:exon
so has part: feature:352352-352428:-1:exon
so has part: feature:350656-350715:-1:exon
so has part: feature:349933-350078:-1:exon
so has part: feature:349776-349824:-1:exon
so has part: feature:346178-346247:-1:exon
so has part: feature:345786-345904:-1:exon
so has part: feature:344727-344765:-1:exon
so has part: feature:344094-344244:-1:exon
so has part: feature:342443-342555:-1:exon
so has part: feature:341760-341862:-1:exon
so has part: feature:337431-337591:-1:exon
so has part: feature:335564-335677:-1:exon
so has part: feature:331413-331580:-1:exon
so has part: feature:330735-330842:-1:exon

XP_026640379.1
type: Protein
SIO_000068: ncbiprotein

position:330735:-1
position: 330735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375441:-1
position: 375441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373778-373869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373284-373370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371901-372016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369456-369600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365560-365663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362435-362562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:361808-361856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359444-359515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358969-359057:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356345-356423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353504-353617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352564-352657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352352-352428:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350656-350715:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349933-350078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349776-349824:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:346178-346247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:345786-345904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:344727-344765:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:344094-344244:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342443-342555:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341760-341862:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:337431-337591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:335564-335677:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:331413-331580:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:330735-330842:-1:exon

Nup107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nup107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup107 isoform X1
translation: MDRSIFGEMSSPVIREAEVTRTARKQSAQKRVLIQSNQDENFGNTTPRSQMIPRTPSSFRQPFTPPNRSLLKHPDISCILGTDGRSPRHTQSSGFLGNLSMVTNLDDSNWATAFSSQRSGFYTNLEPHSVTEDVNLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMFAVAAVNASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENTLHTLKQRQLLSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGSGTELEPVEGNPYRRIWKISCWRMAEDELFNKYERAIYASLSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVVTLDETEELPREYTEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRSNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLISEKHTNLIAFYTCHLPQDLAVAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDLAPSLDTGTTEEDRVKVDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSIAEIYNQWEEQGLESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLISQPTFTEKVAFEHKEKKYEMDHSIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDPERTHQMALLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKLLQKLRESSLMLLDQGLDPLGYEAQS
SIO_010081: Nup107
subclass of: SO_0000673
so part of: Nup107
location: complement(join(330735..330842,331413..331580,335564..335677,336347..336472,337431..337591,341760..341862,342443..342555,344094..344244,344727..344765,345786..345904,346178..346247,349776..349824,349933..350078,350656..350715,352352..352428,352564..352657,353504..353617,356345..356423,358969..359057,359444..359515,361808..361856,362435..362562,365560..365663,369456..369600,371901..372016,373284..373370,373778..373869,375434..375441))
location: region:330735-375441:-1
so has part: feature:375434-375441:-1:exon
so has part: feature:373778-373869:-1:exon
so has part: feature:373284-373370:-1:exon
so has part: feature:371901-372016:-1:exon
so has part: feature:369456-369600:-1:exon
so has part: feature:365560-365663:-1:exon
so has part: feature:362435-362562:-1:exon
so has part: feature:361808-361856:-1:exon
so has part: feature:359444-359515:-1:exon
so has part: feature:358969-359057:-1:exon
so has part: feature:356345-356423:-1:exon
so has part: feature:353504-353617:-1:exon
so has part: feature:352564-352657:-1:exon
so has part: feature:352352-352428:-1:exon
so has part: feature:350656-350715:-1:exon
so has part: feature:349933-350078:-1:exon
so has part: feature:349776-349824:-1:exon
so has part: feature:346178-346247:-1:exon
so has part: feature:345786-345904:-1:exon
so has part: feature:344727-344765:-1:exon
so has part: feature:344094-344244:-1:exon
so has part: feature:342443-342555:-1:exon
so has part: feature:341760-341862:-1:exon
so has part: feature:337431-337591:-1:exon
so has part: feature:336347-336472:-1:exon
so has part: feature:335564-335677:-1:exon
so has part: feature:331413-331580:-1:exon
so has part: feature:330735-330842:-1:exon

XP_013205732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373778-373869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373284-373370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371901-372016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369456-369600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365560-365663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362435-362562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:361808-361856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359444-359515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358969-359057:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356345-356423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353504-353617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352564-352657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352352-352428:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350656-350715:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349933-350078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349776-349824:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:346178-346247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:345786-345904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:344727-344765:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:344094-344244:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342443-342555:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341760-341862:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:337431-337591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336347-336472:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:335564-335677:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:331413-331580:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:330735-330842:-1:exon

Nup107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nup107
product: nucleoporin 107, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026784579.1
SIO_010081: Nup107
subclass of: SO_0000673
so part of: Nup107
location: complement(join(333390..335450,335564..335677,336347..336472,337431..337591,341760..341862,342443..342555,344094..344244,344727..344765,345786..345904,346178..346247,349776..349824,349933..350078,350656..350715,352352..352428,352564..352657,353504..353617,356345..356423,358969..359057,359444..359515,361808..361856,362435..362562,365560..365663,369456..369600,371901..372016,373284..373370,373778..373869,375434..375540))
location: region:333390-375540:-1
so has part: feature:375434-375540:-1:exon
so has part: feature:373778-373869:-1:exon
so has part: feature:373284-373370:-1:exon
so has part: feature:371901-372016:-1:exon
so has part: feature:369456-369600:-1:exon
so has part: feature:365560-365663:-1:exon
so has part: feature:362435-362562:-1:exon
so has part: feature:361808-361856:-1:exon
so has part: feature:359444-359515:-1:exon
so has part: feature:358969-359057:-1:exon
so has part: feature:356345-356423:-1:exon
so has part: feature:353504-353617:-1:exon
so has part: feature:352564-352657:-1:exon
so has part: feature:352352-352428:-1:exon
so has part: feature:350656-350715:-1:exon
so has part: feature:349933-350078:-1:exon
so has part: feature:349776-349824:-1:exon
so has part: feature:346178-346247:-1:exon
so has part: feature:345786-345904:-1:exon
so has part: feature:344727-344765:-1:exon
so has part: feature:344094-344244:-1:exon
so has part: feature:342443-342555:-1:exon
so has part: feature:341760-341862:-1:exon
so has part: feature:337431-337591:-1:exon
so has part: feature:336347-336472:-1:exon
so has part: feature:335564-335677:-1:exon
so has part: feature:333390-335450:-1:exon

position:333390:-1
position: 333390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373778-373869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373284-373370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371901-372016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369456-369600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365560-365663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362435-362562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:361808-361856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359444-359515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358969-359057:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356345-356423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353504-353617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352564-352657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352352-352428:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350656-350715:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349933-350078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349776-349824:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:346178-346247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:345786-345904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:344727-344765:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:344094-344244:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342443-342555:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341760-341862:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:337431-337591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336347-336472:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:335564-335677:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:333390-335450:-1:exon

position:335450:-1
position: 335450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nup107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nup107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup107 isoform X3
translation: MDRSIFGEMSSPVIREAEVTRTARKQSAQKRVLIQSNQDENFGNTTPRSQMIPRTPSSFRQPFTPPNRSLLKHPDISCILGTDGRSPRHTQSSGFLGNLSMVTNLDDSNWATAFSSQRSGFYTNLEPHSVTEDVNLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMFAVAAVNASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENTLHTLKQRQLLSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGSGTELEPVEGNPYRRIWKISCWRMAEDELFNKYERAIYASLSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVVTLDETEELPREYTEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRSNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLISEKHTNLIAFYTCHLPQDLAVAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDLAPSLDTGTTEEDRVKVDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSIAEIYNQWEEQGLESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLISQPTFTEKVAFEHKEKKYEMDHSIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREGSNGRSLTLACRPTCEYSLHHV
SIO_010081: Nup107
subclass of: SO_0000673
so part of: Nup107
location: complement(join(335382..335450,335564..335677,336347..336472,337431..337591,341760..341862,342443..342555,344094..344244,344727..344765,345786..345904,346178..346247,349776..349824,349933..350078,350656..350715,352352..352428,352564..352657,353504..353617,356345..356423,358969..359057,359444..359515,361808..361856,362435..362562,365560..365663,369456..369600,371901..372016,373284..373370,373778..373869,375434..375441))
location: region:335382-375441:-1
so has part: feature:375434-375441:-1:exon
so has part: feature:373778-373869:-1:exon
so has part: feature:373284-373370:-1:exon
so has part: feature:371901-372016:-1:exon
so has part: feature:369456-369600:-1:exon
so has part: feature:365560-365663:-1:exon
so has part: feature:362435-362562:-1:exon
so has part: feature:361808-361856:-1:exon
so has part: feature:359444-359515:-1:exon
so has part: feature:358969-359057:-1:exon
so has part: feature:356345-356423:-1:exon
so has part: feature:353504-353617:-1:exon
so has part: feature:352564-352657:-1:exon
so has part: feature:352352-352428:-1:exon
so has part: feature:350656-350715:-1:exon
so has part: feature:349933-350078:-1:exon
so has part: feature:349776-349824:-1:exon
so has part: feature:346178-346247:-1:exon
so has part: feature:345786-345904:-1:exon
so has part: feature:344727-344765:-1:exon
so has part: feature:344094-344244:-1:exon
so has part: feature:342443-342555:-1:exon
so has part: feature:341760-341862:-1:exon
so has part: feature:337431-337591:-1:exon
so has part: feature:336347-336472:-1:exon
so has part: feature:335564-335677:-1:exon
so has part: feature:335382-335450:-1:exon

XP_026640380.1
type: Protein
SIO_000068: ncbiprotein

position:335382:-1
position: 335382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373778-373869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373284-373370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371901-372016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369456-369600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365560-365663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362435-362562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:361808-361856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359444-359515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358969-359057:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356345-356423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353504-353617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352564-352657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352352-352428:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350656-350715:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349933-350078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349776-349824:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:346178-346247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:345786-345904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:344727-344765:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:344094-344244:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342443-342555:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341760-341862:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:337431-337591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336347-336472:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:335564-335677:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:335382-335450:-1:exon

Rap1b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rap1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(391787..426173)
location: region:391787-426173:-1
so has part: feature:391787-426173:-1:exon
subclass of: SO_0000010

102002021
type: Gene
SIO_000068: ncbigene

position:391787:-1
position: 391787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426173:-1
position: 426173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391787-426173:-1:exon

Rap1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rap1b
product: RAP1B, member of RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_005357901.3
SIO_010081: Rap1b
subclass of: SO_0000673
so part of: Rap1b
location: complement(join(391787..393067,395169..395285,396086..396229,396866..397006,398170..398226,399654..399722,401274..401355,425998..426173))
location: region:391787-426173:-1
so has part: feature:425998-426173:-1:exon
so has part: feature:401274-401355:-1:exon
so has part: feature:399654-399722:-1:exon
so has part: feature:398170-398226:-1:exon
so has part: feature:396866-397006:-1:exon
so has part: feature:396086-396229:-1:exon
so has part: feature:395169-395285:-1:exon
so has part: feature:391787-393067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425998-426173:-1:exon

position:425998:-1
position: 425998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:401274-401355:-1:exon

position:401274:-1
position: 401274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401355:-1
position: 401355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399654-399722:-1:exon

position:399654:-1
position: 399654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399722:-1
position: 399722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:398170-398226:-1:exon

position:398170:-1
position: 398170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398226:-1
position: 398226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:396866-397006:-1:exon

position:396866:-1
position: 396866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397006:-1
position: 397006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:396086-396229:-1:exon

position:396086:-1
position: 396086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396229:-1
position: 396229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:395169-395285:-1:exon

position:395169:-1
position: 395169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395285:-1
position: 395285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:391787-393067:-1:exon

position:393067:-1
position: 393067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rap1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rap1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1b
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSSCRLL
SIO_010081: Rap1b
subclass of: SO_0000673
so part of: Rap1b
location: complement(join(395199..395285,396086..396229,396866..397006,398170..398226,399654..399722,401274..401330))
location: region:395199-401330:-1
so has part: feature:401274-401330:-1:exon
so has part: feature:399654-399722:-1:exon
so has part: feature:398170-398226:-1:exon
so has part: feature:396866-397006:-1:exon
so has part: feature:396086-396229:-1:exon
so has part: feature:395199-395285:-1:exon

XP_005357958.1
type: Protein
SIO_000068: ncbiprotein

position:395199:-1
position: 395199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401330:-1
position: 401330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401274-401330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399654-399722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398170-398226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396866-397006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396086-396229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395199-395285:-1:exon

LOC102002861
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102002861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 557365..557681
location: region:557365-557681:1
so has part: feature:557365-557681:1:exon
subclass of: SO_0000010

102002861
type: Gene
SIO_000068: ncbigene

position:557365:1
position: 557365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557681:1
position: 557681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557365-557681:1:exon

LOC102002861
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC102002861
product: 40S ribosomal protein S27-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357905.3
SIO_010081: LOC102002861
subclass of: SO_0000673
so part of: LOC102002861
location: 557365..557681
location: region:557365-557681:1
so has part: feature:557365-557681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557365-557681:1:exon

LOC102002861
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC102002861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S27-like
translation: MPLAKDLLHPSPEEEKRKHKKKCLVQSPNSYFMDVKCPGCYKITMVFSHAQTVVLCVGCSTVLCQPTGGKASLTEGCSFRRKQH
SIO_010081: LOC102002861
subclass of: SO_0000673
so part of: LOC102002861
location: 557383..557637
location: region:557383-557637:1
so has part: feature:557383-557637:1:exon

XP_005357962.1
type: Protein
SIO_000068: ncbiprotein

position:557383:1
position: 557383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557637:1
position: 557637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557383-557637:1:exon

LOC101986292
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101986292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(629046..642498)
location: region:629046-642498:-1
so has part: feature:629046-642498:-1:exon

101986292
type: Gene
SIO_000068: ncbigene

position:629046:-1
position: 629046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642498:-1
position: 642498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629046-642498:-1:exon

LOC101986292
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101986292
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101986292
subclass of: SO_0000673
so part of: LOC101986292
location: complement(629046..629799)
location: region:629046-629799:-1
so has part: feature:629046-629799:-1:exon

position:629799:-1
position: 629799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629046-629799:-1:exon

LOC101986292
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101986292
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101986292
subclass of: SO_0000673
so part of: LOC101986292
location: complement(642445..642498)
location: region:642445-642498:-1
so has part: feature:642445-642498:-1:exon

position:642445:-1
position: 642445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642445-642498:-1:exon

Mdm1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 710734..742064
location: region:710734-742064:1
so has part: feature:710734-742064:1:exon
subclass of: SO_0000010

101979020
type: Gene
SIO_000068: ncbigene

position:710734:1
position: 710734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742064:1
position: 742064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710734-742064:1:exon

Mdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm1
product: Mdm1 nuclear protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026784585.1
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710734..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,721918..722013,726717..726746,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..742064)
location: region:710734-742064:1
so has part: feature:710734-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:721918-722013:1:exon
so has part: feature:726717-726746:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-742064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:710734-710881:1:exon

position:710881:1
position: 710881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

position:711764:1
position: 711764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711878:1
position: 711878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

position:715745:1
position: 715745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716118:1
position: 716118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

position:717139:1
position: 717139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717273:1
position: 717273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

position:720020:1
position: 720020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720187:1
position: 720187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

position:721480:1
position: 721480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721574:1
position: 721574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

position:721653:1
position: 721653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721752:1
position: 721752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:721918-722013:1:exon

position:721918:1
position: 721918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722013:1
position: 722013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:726717-726746:1:exon

position:726717:1
position: 726717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726746:1
position: 726746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:727050-727225:1:exon

position:727050:1
position: 727050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727225:1
position: 727225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:727636-727935:1:exon

position:727636:1
position: 727636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727935:1
position: 727935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:728813-728922:1:exon

position:728813:1
position: 728813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728922:1
position: 728922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:729421-729530:1:exon

position:729421:1
position: 729421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729530:1
position: 729530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:737796-738009:1:exon

position:737796:1
position: 737796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738009:1
position: 738009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:739626-739685:1:exon

position:739626:1
position: 739626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739685:1
position: 739685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:741085-742064:1:exon

position:741085:1
position: 741085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm1
product: Mdm1 nuclear protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005357908.2
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710734..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,726717..726746,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..742064)
location: region:710734-742064:1
so has part: feature:710734-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:726717-726746:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-742064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:710734-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726717-726746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739626-739685:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:741085-742064:1:exon

Mdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm1
product: Mdm1 nuclear protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026784586.1
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710734..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..742064)
location: region:710734-742064:1
so has part: feature:710734-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-742064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:710734-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739626-739685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:741085-742064:1:exon

Mdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm1
product: Mdm1 nuclear protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784587.1
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710734..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,741085..742064)
location: region:710734-742064:1
so has part: feature:710734-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:741085-742064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:710734-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:741085-742064:1:exon

Mdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mdm1
product: Mdm1 nuclear protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026784588.1
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710748..710881,711764..711878,715988..716118,717139..717273,720020..720187,721480..721574,721653..721752,721918..722013,726717..726746,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..742064)
location: region:710748-742064:1
so has part: feature:710748-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715988-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:721918-722013:1:exon
so has part: feature:726717-726746:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-742064:1:exon

position:710748:1
position: 710748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710748-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715988-716118:1:exon

position:715988:1
position: 715988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:721918-722013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726717-726746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739626-739685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:741085-742064:1:exon

Mdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear protein MDM1 isoform X1
translation: MPVRFKGLSEYQRNFLWKKSYLSESYNPSVGRKYSGAGLRSDQLGITKEPSFISKRRVPYHDTQITKSLEWNGAITEDAMVVPPEPQTLPTQNPQETEPKEDANQERALSLEASRVPKRTRSHSADSRAEGASDAVEKHRDATRNHVLDPKEAELEPSTKPPAERVDPRLDRRLRKKAGLAVVPLCNALRNSEYQRQFVWKTRKETAPVFPASQVFRNKSQIVPQFKGNTVIHETEYRRNFKGLSPVKEPKLREGLKGNSGLKTLSAEKKADEPLELEVEMASEDTDQPKRKLSSWRHQRLGKVNSEYRAKFLSPAQYLYKAGAWTRMKENVPNQTSSLSTEGHCPINDVCDKKAANSLCHCCTKERGSLNAMWYAEVKELREKAESYRKRVQGTHFSRDHLNQILSNSNCCWDVSSTTSSEGSISSNIRALDLASNLTGHKTPQKHPSPKLEERKVALGEQSHKNTTGKQALQEAATLPVRRKLAWDSESPNEDTQEQPTGDGEEERERDKQIYVGESEKLDTQDKSNADRMKEGSESSSVSSGKGGRLPTPKLRELGMQRTHHDLTTPAVGGAVLVSPSKGKPSTPEQRKRASSQDGVDAPKRDLPKTGNHCAMSLLTSPAAGIKTVDPLPLREDWEAKVPEYQTNTPGQHSTPGFLPYWHPSSRIQGRLRDPQFQQNVGKPRMNSLQLPSPEAFNDEDADRLSEISARSAASSLQAFQTLARAQKRKENFWGKT
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710864..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,721918..722013,726717..726746,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..741197)
location: region:710864-741197:1
so has part: feature:710864-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:721918-722013:1:exon
so has part: feature:726717-726746:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-741197:1:exon

XP_026640386.1
type: Protein
SIO_000068: ncbiprotein

position:710864:1
position: 710864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741197:1
position: 741197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710864-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:721918-722013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726717-726746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739626-739685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:741085-741197:1:exon

Mdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear protein MDM1 isoform X2
translation: MPVRFKGLSEYQRNFLWKKSYLSESYNPSVGRKYSGAGLRSDQLGITKEPSFISKRRVPYHDTQITKSLEWNGAITEDAMVVPPEPQTLPTQNPQETEPKEDANQERALSLEASRVPKRTRSHSADSRAEGASDAVEKHRDATRNHVLDPKEAELEPSTKPPAERVDPRLDRRLRKKAGLAVVPLCNALRNSEYQRQFVWKTRKETAPVFPASQVFRNKSQIVPQFKGNTVIHETEYRRNFKGLSPVKEPKLREGLKGNSGLKTLSAEKKADEPLELEVEMASEDTDQPKRKLSSWRHQRLGKVNSEYRAKFLSPAQYLYKAGAWTRMKENVPNQGSLNAMWYAEVKELREKAESYRKRVQGTHFSRDHLNQILSNSNCCWDVSSTTSSEGSISSNIRALDLASNLTGHKTPQKHPSPKLEERKVALGEQSHKNTTGKQALQEAATLPVRRKLAWDSESPNEDTQEQPTGDGEEERERDKQIYVGESEKLDTQDKSNADRMKEGSESSSVSSGKGGRLPTPKLRELGMQRTHHDLTTPAVGGAVLVSPSKGKPSTPEQRKRASSQDGVDAPKRDLPKTGNHCAMSLLTSPAAGIKTVDPLPLREDWEAKVPEYQTNTPGQHSTPGFLPYWHPSSRIQGRLRDPQFQQNVGKPRMNSLQLPSPEAFNDEDADRLSEISARSAASSLQAFQTLARAQKRKENFWGKT
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710864..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,726717..726746,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..741197)
location: region:710864-741197:1
so has part: feature:710864-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:726717-726746:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-741197:1:exon

XP_005357965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710864-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726717-726746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739626-739685:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:741085-741197:1:exon

Mdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear protein MDM1 isoform X3
translation: MPVRFKGLSEYQRNFLWKKSYLSESYNPSVGRKYSGAGLRSDQLGITKEPSFISKRRVPYHDTQITKSLEWNGAITEDAMVVPPEPQTLPTQNPQETEPKEDANQERALSLEASRVPKRTRSHSADSRAEGASDAVEKHRDATRNHVLDPKEAELEPSTKPPAERVDPRLDRRLRKKAGLAVVPLCNALRNSEYQRQFVWKTRKETAPVFPASQVFRNKSQIVPQFKGNTVIHETEYRRNFKGLSPVKEPKLREGLKGNSGLKTLSAEKKADEPLELEVEMASEDTDQPKRKLSSWRHQRLGKVNSEYRAKFLSPAQYLYKAGAWTRMKENVPNQVKELREKAESYRKRVQGTHFSRDHLNQILSNSNCCWDVSSTTSSEGSISSNIRALDLASNLTGHKTPQKHPSPKLEERKVALGEQSHKNTTGKQALQEAATLPVRRKLAWDSESPNEDTQEQPTGDGEEERERDKQIYVGESEKLDTQDKSNADRMKEGSESSSVSSGKGGRLPTPKLRELGMQRTHHDLTTPAVGGAVLVSPSKGKPSTPEQRKRASSQDGVDAPKRDLPKTGNHCAMSLLTSPAAGIKTVDPLPLREDWEAKVPEYQTNTPGQHSTPGFLPYWHPSSRIQGRLRDPQFQQNVGKPRMNSLQLPSPEAFNDEDADRLSEISARSAASSLQAFQTLARAQKRKENFWGKT
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710864..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..741197)
location: region:710864-741197:1
so has part: feature:710864-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-741197:1:exon

XP_026640387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710864-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739626-739685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:741085-741197:1:exon

Mdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear protein MDM1 isoform X4
translation: MPVRFKGLSEYQRNFLWKKSYLSESYNPSVGRKYSGAGLRSDQLGITKEPSFISKRRVPYHDTQITKSLEWNGAITEDAMVVPPEPQTLPTQNPQETEPKEDANQERALSLEASRVPKRTRSHSADSRAEGASDAVEKHRDATRNHVLDPKEAELEPSTKPPAERVDPRLDRRLRKKAGLAVVPLCNALRNSEYQRQFVWKTRKETAPVFPASQVFRNKSQIVPQFKGNTVIHETEYRRNFKGLSPVKEPKLREGLKGNSGLKTLSAEKKADEPLELEVEMASEDTDQPKRKLSSWRHQRLGKVNSEYRAKFLSPAQYLYKAGAWTRMKENVPNQVKELREKAESYRKRVQGTHFSRDHLNQILSNSNCCWDVSSTTSSEGSISSNIRALDLASNLTGHKTPQKHPSPKLEERKVALGEQSHKNTTGKQALQEAATLPVRRKLAWDSESPNEDTQEQPTGDGEEERERDKQIYVGESEKLDTQDKSNADRMKEGSESSSVSSGKGGRLPTPKLRELGMQRTHHDLTTPAVGGAVLVSPSKGKPSTPEQRKRASSQDGVDAPKRDLPKTGNHCAMSLLTSPAAGIKTVDPLPLREDWEAKVPEYQTNTPGQHSTPGFLPYWHPSSRIQGRLRDPQFQQNDADRLSEISARSAASSLQAFQTLARAQKRKENFWGKT
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710864..710881,711764..711878,715745..716118,717139..717273,720020..720187,721480..721574,721653..721752,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,741085..741197)
location: region:710864-741197:1
so has part: feature:710864-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715745-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:741085-741197:1:exon

XP_026640388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710864-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715745-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:741085-741197:1:exon

Mdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear protein MDM1 isoform X5
translation: MPVRFKGLSEYQRNFLWKKSYLSESYNPSVGRKYSGAGLRSDQLDSRAEGASDAVEKHRDATRNHVLDPKEAELEPSTKPPAERVDPRLDRRLRKKAGLAVVPLCNALRNSEYQRQFVWKTRKETAPVFPASQVFRNKSQIVPQFKGNTVIHETEYRRNFKGLSPVKEPKLREGLKGNSGLKTLSAEKKADEPLELEVEMASEDTDQPKRKLSSWRHQRLGKVNSEYRAKFLSPAQYLYKAGAWTRMKENVPNQTSSLSTEGHCPINDVCDKKAANSLCHCCTKERGSLNAMWYAEVKELREKAESYRKRVQGTHFSRDHLNQILSNSNCCWDVSSTTSSEGSISSNIRALDLASNLTGHKTPQKHPSPKLEERKVALGEQSHKNTTGKQALQEAATLPVRRKLAWDSESPNEDTQEQPTGDGEEERERDKQIYVGESEKLDTQDKSNADRMKEGSESSSVSSGKGGRLPTPKLRELGMQRTHHDLTTPAVGGAVLVSPSKGKPSTPEQRKRASSQDGVDAPKRDLPKTGNHCAMSLLTSPAAGIKTVDPLPLREDWEAKVPEYQTNTPGQHSTPGFLPYWHPSSRIQGRLRDPQFQQNVGKPRMNSLQLPSPEAFNDEDADRLSEISARSAASSLQAFQTLARAQKRKENFWGKT
SIO_010081: Mdm1
subclass of: SO_0000673
so part of: Mdm1
location: join(710864..710881,711764..711878,715988..716118,717139..717273,720020..720187,721480..721574,721653..721752,721918..722013,726717..726746,727050..727225,727636..727935,728813..728922,729421..729530,737796..738009,739626..739685,741085..741197)
location: region:710864-741197:1
so has part: feature:710864-710881:1:exon
so has part: feature:711764-711878:1:exon
so has part: feature:715988-716118:1:exon
so has part: feature:717139-717273:1:exon
so has part: feature:720020-720187:1:exon
so has part: feature:721480-721574:1:exon
so has part: feature:721653-721752:1:exon
so has part: feature:721918-722013:1:exon
so has part: feature:726717-726746:1:exon
so has part: feature:727050-727225:1:exon
so has part: feature:727636-727935:1:exon
so has part: feature:728813-728922:1:exon
so has part: feature:729421-729530:1:exon
so has part: feature:737796-738009:1:exon
so has part: feature:739626-739685:1:exon
so has part: feature:741085-741197:1:exon

XP_026640389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710864-710881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711764-711878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715988-716118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717139-717273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720020-720187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721480-721574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721653-721752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:721918-722013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726717-726746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727050-727225:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:727636-727935:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728813-728922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729421-729530:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:737796-738009:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739626-739685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:741085-741197:1:exon

Il22
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Il22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 783792..786966
location: region:783792-786966:1
so has part: feature:783792-786966:1:exon
subclass of: SO_0000010

101980251
type: Gene
SIO_000068: ncbigene

position:783792:1
position: 783792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786966:1
position: 786966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783792-786966:1:exon

Il22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Il22
product: interleukin 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_005357912.1
SIO_010081: Il22
subclass of: SO_0000673
so part of: Il22
location: join(783792..783977,784581..784646,784762..784905,785787..785852,786889..786966)
location: region:783792-786966:1
so has part: feature:783792-783977:1:exon
so has part: feature:784581-784646:1:exon
so has part: feature:784762-784905:1:exon
so has part: feature:785787-785852:1:exon
so has part: feature:786889-786966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783792-783977:1:exon

position:783977:1
position: 783977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784581-784646:1:exon

position:784581:1
position: 784581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784646:1
position: 784646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:784762-784905:1:exon

position:784762:1
position: 784762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784905:1
position: 784905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:785787-785852:1:exon

position:785787:1
position: 785787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785852:1
position: 785852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786889-786966:1:exon

position:786889:1
position: 786889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Il22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Il22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-22
translation: MAGLKKSMSFSLMGILAVNCLILTALWVQKAAALPVTSHCKIDESDFQRPYFINRTFMLAEEASFADNNTDVRLIGDELFQGVKMQDRCYLMKEILNFTLGEVLIPQSDRFQPHMQEVVSFLTKLSSQLSSCHITGNGQRIQKNIQTLKETVKQLGEGGEIKVIGELNLLFMFLRNSCV
SIO_010081: Il22
subclass of: SO_0000673
so part of: Il22
location: join(783792..783977,784581..784646,784762..784905,785787..785852,786889..786966)
location: region:783792-786966:1
so has part: feature:783792-783977:1:exon
so has part: feature:784581-784646:1:exon
so has part: feature:784762-784905:1:exon
so has part: feature:785787-785852:1:exon
so has part: feature:786889-786966:1:exon

XP_005357969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:783792-783977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784581-784646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784762-784905:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:785787-785852:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786889-786966:1:exon

Ifng
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ifng
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 875835..879759
location: region:875835-879759:1
so has part: feature:875835-879759:1:exon
subclass of: SO_0000010

101980534
type: Gene
SIO_000068: ncbigene

position:875835:1
position: 875835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879759:1
position: 879759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875835-879759:1:exon

Ifng
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ifng
product: interferon gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_005357913.1
SIO_010081: Ifng
subclass of: SO_0000673
so part of: Ifng
location: join(875835..875942,877122..877190,877280..877462,879601..879759)
location: region:875835-879759:1
so has part: feature:875835-875942:1:exon
so has part: feature:877122-877190:1:exon
so has part: feature:877280-877462:1:exon
so has part: feature:879601-879759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875835-875942:1:exon

position:875942:1
position: 875942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:877122-877190:1:exon

position:877122:1
position: 877122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877190:1
position: 877190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:877280-877462:1:exon

position:877280:1
position: 877280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877462:1
position: 877462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:879601-879759:1:exon

position:879601:1
position: 879601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ifng
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ifng
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon gamma
translation: MIGTRCILALLLCLTQAISDCEGTPIKEIETLKKYFNSTSSDVGEGGDLLFEILKNWQEDGDTKLIESQIISFYFKLFEALKDHEAIQDSMNTIKADLISNFFNNSEAKVNDFEKIAKIPVDDPQVQRKAVNELMKVMHRLSPKSSLRKRKRSRCCFAVGNRPNKNNPASAV
SIO_010081: Ifng
subclass of: SO_0000673
so part of: Ifng
location: join(875835..875942,877122..877190,877280..877462,879601..879759)
location: region:875835-879759:1
so has part: feature:875835-875942:1:exon
so has part: feature:877122-877190:1:exon
so has part: feature:877280-877462:1:exon
so has part: feature:879601-879759:1:exon

XP_005357970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:875835-875942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:877122-877190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877280-877462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879601-879759:1:exon

Dyrk2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Dyrk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1274755..1288333)
location: region:1274755-1288333:-1
so has part: feature:1274755-1288333:-1:exon
subclass of: SO_0000010

101980807
type: Gene
SIO_000068: ncbigene

position:1274755:-1
position: 1274755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288333:-1
position: 1288333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274755-1288333:-1:exon

Dyrk2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Dyrk2
product: dual specificity tyrosine phosphorylation regulated kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_003377960.1
SIO_010081: Dyrk2
so part of: Dyrk2
location: complement(join(1274755..1277390,1277653..1280705,1287688..1287836,1288262..1288333))
location: region:1274755-1288333:-1
so has part: feature:1288262-1288333:-1:exon
so has part: feature:1287688-1287836:-1:exon
so has part: feature:1277653-1280705:-1:exon
so has part: feature:1274755-1277390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288262-1288333:-1:exon

position:1288262:-1
position: 1288262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287688-1287836:-1:exon

position:1287688:-1
position: 1287688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287836:-1
position: 1287836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1277653-1280705:-1:exon

position:1277653:-1
position: 1277653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280705:-1
position: 1280705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1274755-1277390:-1:exon

position:1277390:-1
position: 1277390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dyrk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dyrk2
product: dual specificity tyrosine phosphorylation regulated kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005357914.2
SIO_010081: Dyrk2
subclass of: SO_0000673
so part of: Dyrk2
location: complement(join(1277507..1280705,1287688..1287836,1288262..1288333))
location: region:1277507-1288333:-1
so has part: feature:1288262-1288333:-1:exon
so has part: feature:1287688-1287836:-1:exon
so has part: feature:1277507-1280705:-1:exon

position:1277507:-1
position: 1277507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288262-1288333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287688-1287836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277507-1280705:-1:exon

Dyrk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dyrk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 2
translation: MLTRKPSAAAPAAYPTGRGGDTAVRQLQASPGIGAGAPRSGVGTGPPSPIALPPLRASNAATAAHTIGGGRHTMNDHLHISSHSHGQIQVQQLFEDNSNKRTVLTTQPNGLTTVGKTGLPVVPERQLDGIHRRQGSSTSLKSMESMGKVKATPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGPNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSSIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTAVKRVTDSTGAITSISKLPPPSSSASKLRTNLAQMTDANGNIQQRTVLPKLVS
SIO_010081: Dyrk2
subclass of: SO_0000673
so part of: Dyrk2
location: complement(join(1279098..1280705,1287688..1287836,1288262..1288310))
location: region:1279098-1288310:-1
so has part: feature:1288262-1288310:-1:exon
so has part: feature:1287688-1287836:-1:exon
so has part: feature:1279098-1280705:-1:exon

XP_005357971.1
type: Protein
SIO_000068: ncbiprotein

position:1279098:-1
position: 1279098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288310:-1
position: 1288310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288262-1288310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287688-1287836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279098-1280705:-1:exon

Cand1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1636167..1679241)
location: region:1636167-1679241:-1
so has part: feature:1636167-1679241:-1:exon
subclass of: SO_0000010

101981386
type: Gene
SIO_000068: ncbigene

position:1636167:-1
position: 1636167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679241:-1
position: 1679241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1636167-1679241:-1:exon

Cand1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cand1
product: cullin associated and neddylation dissociated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005357915.3
SIO_010081: Cand1
subclass of: SO_0000673
so part of: Cand1
location: complement(join(1636167..1636736,1641518..1641625,1642458..1642622,1642702..1642871,1644622..1644717,1645618..1647111,1647365..1647506,1649366..1649658,1651901..1652046,1653244..1653349,1653836..1654092,1655468..1655591,1656236..1656390,1667971..1668114,1678882..1679241))
location: region:1636167-1679241:-1
so has part: feature:1678882-1679241:-1:exon
so has part: feature:1667971-1668114:-1:exon
so has part: feature:1656236-1656390:-1:exon
so has part: feature:1655468-1655591:-1:exon
so has part: feature:1653836-1654092:-1:exon
so has part: feature:1653244-1653349:-1:exon
so has part: feature:1651901-1652046:-1:exon
so has part: feature:1649366-1649658:-1:exon
so has part: feature:1647365-1647506:-1:exon
so has part: feature:1645618-1647111:-1:exon
so has part: feature:1644622-1644717:-1:exon
so has part: feature:1642702-1642871:-1:exon
so has part: feature:1642458-1642622:-1:exon
so has part: feature:1641518-1641625:-1:exon
so has part: feature:1636167-1636736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1678882-1679241:-1:exon

position:1678882:-1
position: 1678882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1667971-1668114:-1:exon

position:1667971:-1
position: 1667971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1668114:-1
position: 1668114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1656236-1656390:-1:exon

position:1656236:-1
position: 1656236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1656390:-1
position: 1656390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1655468-1655591:-1:exon

position:1655468:-1
position: 1655468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655591:-1
position: 1655591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1653836-1654092:-1:exon

position:1653836:-1
position: 1653836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1654092:-1
position: 1654092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1653244-1653349:-1:exon

position:1653244:-1
position: 1653244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1653349:-1
position: 1653349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1651901-1652046:-1:exon

position:1651901:-1
position: 1651901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652046:-1
position: 1652046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1649366-1649658:-1:exon

position:1649366:-1
position: 1649366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649658:-1
position: 1649658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1647365-1647506:-1:exon

position:1647365:-1
position: 1647365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647506:-1
position: 1647506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1645618-1647111:-1:exon

position:1645618:-1
position: 1645618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647111:-1
position: 1647111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1644622-1644717:-1:exon

position:1644622:-1
position: 1644622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644717:-1
position: 1644717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1642702-1642871:-1:exon

position:1642702:-1
position: 1642702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642871:-1
position: 1642871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1642458-1642622:-1:exon

position:1642458:-1
position: 1642458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642622:-1
position: 1642622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1641518-1641625:-1:exon

position:1641518:-1
position: 1641518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641625:-1
position: 1641625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1636167-1636736:-1:exon

position:1636736:-1
position: 1636736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cand1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cand1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-associated NEDD8-dissociated protein 1
translation: MASASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILSCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLEQPSAFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGPDLSNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVITGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVAGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDSVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKDSSSTNLESMDTS
SIO_010081: Cand1
subclass of: SO_0000673
so part of: Cand1
location: complement(join(1636512..1636736,1641518..1641625,1642458..1642622,1642702..1642871,1644622..1644717,1645618..1647111,1647365..1647506,1649366..1649658,1651901..1652046,1653244..1653349,1653836..1654092,1655468..1655591,1656236..1656390,1667971..1668114,1678882..1678949))
location: region:1636512-1678949:-1
so has part: feature:1678882-1678949:-1:exon
so has part: feature:1667971-1668114:-1:exon
so has part: feature:1656236-1656390:-1:exon
so has part: feature:1655468-1655591:-1:exon
so has part: feature:1653836-1654092:-1:exon
so has part: feature:1653244-1653349:-1:exon
so has part: feature:1651901-1652046:-1:exon
so has part: feature:1649366-1649658:-1:exon
so has part: feature:1647365-1647506:-1:exon
so has part: feature:1645618-1647111:-1:exon
so has part: feature:1644622-1644717:-1:exon
so has part: feature:1642702-1642871:-1:exon
so has part: feature:1642458-1642622:-1:exon
so has part: feature:1641518-1641625:-1:exon
so has part: feature:1636512-1636736:-1:exon

XP_005357972.1
type: Protein
SIO_000068: ncbiprotein

position:1636512:-1
position: 1636512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678949:-1
position: 1678949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678882-1678949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1667971-1668114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1656236-1656390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655468-1655591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653836-1654092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1653244-1653349:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1651901-1652046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1649366-1649658:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1647365-1647506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1645618-1647111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1644622-1644717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1642702-1642871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1642458-1642622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1641518-1641625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1636512-1636736:-1:exon

LOC113457395
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457395
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2176486..2176594)
location: region:2176486-2176594:-1
so has part: feature:2176486-2176594:-1:exon
subclass of: SO_0000578

113457395
type: Gene
SIO_000068: ncbigene

position:2176486:-1
position: 2176486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2176594:-1
position: 2176594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2176486-2176594:-1:exon

LOC113457395
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snoRNA
gene: LOC113457395
product: small nucleolar RNA SNORA29
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00429
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377982.1
SIO_010081: LOC113457395
subclass of: SO_0000673
so part of: LOC113457395
location: complement(2176486..2176594)
location: region:2176486-2176594:-1
so has part: feature:2176486-2176594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2176486-2176594:-1:exon

LOC113457390
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457390
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2264363..2264465
location: region:2264363-2264465:1
so has part: feature:2264363-2264465:1:exon
subclass of: SO_0000623

113457390
type: Gene
SIO_000068: ncbigene

position:2264363:1
position: 2264363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264465:1
position: 2264465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2264363-2264465:1:exon

LOC113457390
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457390
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377978.1
SIO_010081: LOC113457390
subclass of: SO_0000673
so part of: LOC113457390
location: 2264363..2264465
location: region:2264363-2264465:1
so has part: feature:2264363-2264465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2264363-2264465:1:exon

Grip1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Grip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2281693..2545271
location: region:2281693-2545271:1
so has part: feature:2281693-2545271:1:exon
subclass of: SO_0000010

101981648
type: Gene
SIO_000068: ncbigene

position:2281693:1
position: 2281693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2545271:1
position: 2545271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2281693-2545271:1:exon

Grip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Grip1
product: glutamate receptor interacting protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005357916.3
SIO_010081: Grip1
subclass of: SO_0000673
so part of: Grip1
location: join(2281693..2282034,2358464..2358544,2393095..2393230,2394803..2394948,2401519..2401602,2405644..2405719,2407754..2407899,2447018..2447165,2448900..2449069,2455210..2455365,2456079..2456231,2465302..2465488,2466073..2466218,2474975..2475055,2483639..2483708,2485245..2485390,2496328..2496472,2499382..2499521,2499679..2499873,2513095..2513251,2514785..2514896,2515034..2515078,2519591..2519824,2541352..2541498,2543504..2545271)
location: region:2281693-2545271:1
so has part: feature:2281693-2282034:1:exon
so has part: feature:2358464-2358544:1:exon
so has part: feature:2393095-2393230:1:exon
so has part: feature:2394803-2394948:1:exon
so has part: feature:2401519-2401602:1:exon
so has part: feature:2405644-2405719:1:exon
so has part: feature:2407754-2407899:1:exon
so has part: feature:2447018-2447165:1:exon
so has part: feature:2448900-2449069:1:exon
so has part: feature:2455210-2455365:1:exon
so has part: feature:2456079-2456231:1:exon
so has part: feature:2465302-2465488:1:exon
so has part: feature:2466073-2466218:1:exon
so has part: feature:2474975-2475055:1:exon
so has part: feature:2483639-2483708:1:exon
so has part: feature:2485245-2485390:1:exon
so has part: feature:2496328-2496472:1:exon
so has part: feature:2499382-2499521:1:exon
so has part: feature:2499679-2499873:1:exon
so has part: feature:2513095-2513251:1:exon
so has part: feature:2514785-2514896:1:exon
so has part: feature:2515034-2515078:1:exon
so has part: feature:2519591-2519824:1:exon
so has part: feature:2541352-2541498:1:exon
so has part: feature:2543504-2545271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2281693-2282034:1:exon

position:2282034:1
position: 2282034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2358464-2358544:1:exon

position:2358464:1
position: 2358464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358544:1
position: 2358544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2393095-2393230:1:exon

position:2393095:1
position: 2393095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2393230:1
position: 2393230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2394803-2394948:1:exon

position:2394803:1
position: 2394803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394948:1
position: 2394948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2401519-2401602:1:exon

position:2401519:1
position: 2401519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401602:1
position: 2401602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2405644-2405719:1:exon

position:2405644:1
position: 2405644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405719:1
position: 2405719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2407754-2407899:1:exon

position:2407754:1
position: 2407754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2407899:1
position: 2407899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2447018-2447165:1:exon

position:2447018:1
position: 2447018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447165:1
position: 2447165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2448900-2449069:1:exon

position:2448900:1
position: 2448900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449069:1
position: 2449069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2455210-2455365:1:exon

position:2455210:1
position: 2455210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455365:1
position: 2455365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2456079-2456231:1:exon

position:2456079:1
position: 2456079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456231:1
position: 2456231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2465302-2465488:1:exon

position:2465302:1
position: 2465302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465488:1
position: 2465488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2466073-2466218:1:exon

position:2466073:1
position: 2466073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466218:1
position: 2466218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2474975-2475055:1:exon

position:2474975:1
position: 2474975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2475055:1
position: 2475055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2483639-2483708:1:exon

position:2483639:1
position: 2483639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483708:1
position: 2483708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2485245-2485390:1:exon

position:2485245:1
position: 2485245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2485390:1
position: 2485390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2496328-2496472:1:exon

position:2496328:1
position: 2496328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496472:1
position: 2496472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2499382-2499521:1:exon

position:2499382:1
position: 2499382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499521:1
position: 2499521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2499679-2499873:1:exon

position:2499679:1
position: 2499679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499873:1
position: 2499873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2513095-2513251:1:exon

position:2513095:1
position: 2513095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513251:1
position: 2513251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2514785-2514896:1:exon

position:2514785:1
position: 2514785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514896:1
position: 2514896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2515034-2515078:1:exon

position:2515034:1
position: 2515034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515078:1
position: 2515078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2519591-2519824:1:exon

position:2519591:1
position: 2519591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519824:1
position: 2519824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2541352-2541498:1:exon

position:2541352:1
position: 2541352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2541498:1
position: 2541498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2543504-2545271:1:exon

position:2543504:1
position: 2543504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Grip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Grip1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glutamate receptor-interacting protein 1
translation: MTQLCQMTWSGPLHQPRGIKLCHSPLGLPFSWYVRKEFTCCCLPPPQPQPPEQSPXVHFAGEQGGRMIAVSFKCRCQILRRLTKDESPYTKSASQTKPPDGALAVRRQSIPEEFKGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVSVQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGSTHAEAMSILKQCGQEATLLIEYDVSIMDSVATASGPLLVEVAKTPGASLGVALTTSVCCNKQVIVIDKIKSASIADRCGALHVGDHILSIDGTSMEYCTLAEATQFLANTTDQVKLEILPHHQTRLALKGPDHVKIQRSNRQLPWESWASNPCSLHTNHHHNSYHPDHCRVPALAFPKAPPPNSPPAMVSSSSPTSMSAYSLSSLNMGTLPRSLYSTSPRGTMMRRRLKKKDFKSSLSLASSTVGLAGQVVHTETTEVVLTADPVTGFGLQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDNCSMEDAVQILQQCEDLVKLKIRKDEDNSDEQESSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQPASSPKKFPISSHSSDLGDGEEDSSTIQKPGKLSDVYPSTVPSVDSAVDSWDGSGIDASYGGQGTTFQTSGYNFNTYDWRSPKQRGSLSPVPKPRSQTYPDVGLSNEDWDRSTASGFAGASDSAEAEQEENFWSQALEDLETCGQSGILRELEEKADRRVSLRNMTLLATIMSGSTMSLNHEAPTARTQLGRQASFQERSSSRPHYSQTTRSNTLPSDVGRKSVTLRKMKQEIKEIMSPTPVELHKVTLYKDSDMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRNPLASQKSTEQQALPGDWSGQNSAFFPQPSHGGNLETREPTNTL
SIO_010081: Grip1
subclass of: SO_0000673
so part of: Grip1
location: join(2281783..2282034,2358464..2358544,2393095..2393230,2394803..2394948,2401519..2401602,2405644..2405719,2407754..2407899,2447018..2447165,2448900..2449069,2455210..2455365,2456079..2456231,2465302..2465488,2466073..2466218,2474975..2475055,2483639..2483708,2485245..2485390,2496328..2496472,2499382..2499521,2499679..2499873,2513095..2513251,2514785..2514896,2515034..2515078,2519591..2519824,2541352..2541498,2543504..2543731)
location: region:2281783-2543731:1
so has part: feature:2281783-2282034:1:exon
so has part: feature:2358464-2358544:1:exon
so has part: feature:2393095-2393230:1:exon
so has part: feature:2394803-2394948:1:exon
so has part: feature:2401519-2401602:1:exon
so has part: feature:2405644-2405719:1:exon
so has part: feature:2407754-2407899:1:exon
so has part: feature:2447018-2447165:1:exon
so has part: feature:2448900-2449069:1:exon
so has part: feature:2455210-2455365:1:exon
so has part: feature:2456079-2456231:1:exon
so has part: feature:2465302-2465488:1:exon
so has part: feature:2466073-2466218:1:exon
so has part: feature:2474975-2475055:1:exon
so has part: feature:2483639-2483708:1:exon
so has part: feature:2485245-2485390:1:exon
so has part: feature:2496328-2496472:1:exon
so has part: feature:2499382-2499521:1:exon
so has part: feature:2499679-2499873:1:exon
so has part: feature:2513095-2513251:1:exon
so has part: feature:2514785-2514896:1:exon
so has part: feature:2515034-2515078:1:exon
so has part: feature:2519591-2519824:1:exon
so has part: feature:2541352-2541498:1:exon
so has part: feature:2543504-2543731:1:exon

XP_005357973.2
type: Protein
SIO_000068: ncbiprotein

position:2281783:1
position: 2281783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543731:1
position: 2543731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2281783-2282034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2358464-2358544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2393095-2393230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2394803-2394948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2401519-2401602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2405644-2405719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407754-2407899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2447018-2447165:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2448900-2449069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2455210-2455365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2456079-2456231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2465302-2465488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2466073-2466218:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2474975-2475055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2483639-2483708:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2485245-2485390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2496328-2496472:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2499382-2499521:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2499679-2499873:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2513095-2513251:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2514785-2514896:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2515034-2515078:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2519591-2519824:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2541352-2541498:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2543504-2543731:1:exon

Helb
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Helb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2551110..2580717)
location: region:2551110-2580717:-1
so has part: feature:2551110-2580717:-1:exon
subclass of: SO_0000010

101986584
type: Gene
SIO_000068: ncbigene

position:2551110:-1
position: 2551110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2580717:-1
position: 2580717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2551110-2580717:-1:exon

Helb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Helb
product: DNA helicase B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357933.3
SIO_010081: Helb
subclass of: SO_0000673
so part of: Helb
location: complement(join(2551110..2552542,2557603..2558100,2560046..2560189,2560875..2561136,2561901..2561960,2563201..2563282,2566654..2566808,2570098..2570239,2571403..2571574,2573965..2574843,2576732..2576901,2578217..2578606,2580540..2580717))
location: region:2551110-2580717:-1
so has part: feature:2580540-2580717:-1:exon
so has part: feature:2578217-2578606:-1:exon
so has part: feature:2576732-2576901:-1:exon
so has part: feature:2573965-2574843:-1:exon
so has part: feature:2571403-2571574:-1:exon
so has part: feature:2570098-2570239:-1:exon
so has part: feature:2566654-2566808:-1:exon
so has part: feature:2563201-2563282:-1:exon
so has part: feature:2561901-2561960:-1:exon
so has part: feature:2560875-2561136:-1:exon
so has part: feature:2560046-2560189:-1:exon
so has part: feature:2557603-2558100:-1:exon
so has part: feature:2551110-2552542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2580540-2580717:-1:exon

position:2580540:-1
position: 2580540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2578217-2578606:-1:exon

position:2578217:-1
position: 2578217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2578606:-1
position: 2578606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2576732-2576901:-1:exon

position:2576732:-1
position: 2576732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576901:-1
position: 2576901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2573965-2574843:-1:exon

position:2573965:-1
position: 2573965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574843:-1
position: 2574843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2571403-2571574:-1:exon

position:2571403:-1
position: 2571403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571574:-1
position: 2571574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2570098-2570239:-1:exon

position:2570098:-1
position: 2570098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2570239:-1
position: 2570239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2566654-2566808:-1:exon

position:2566654:-1
position: 2566654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566808:-1
position: 2566808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2563201-2563282:-1:exon

position:2563201:-1
position: 2563201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563282:-1
position: 2563282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2561901-2561960:-1:exon

position:2561901:-1
position: 2561901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561960:-1
position: 2561960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2560875-2561136:-1:exon

position:2560875:-1
position: 2560875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561136:-1
position: 2561136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2560046-2560189:-1:exon

position:2560046:-1
position: 2560046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2560189:-1
position: 2560189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2557603-2558100:-1:exon

position:2557603:-1
position: 2557603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558100:-1
position: 2558100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2551110-2552542:-1:exon

position:2552542:-1
position: 2552542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Helb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Helb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA helicase B
translation: MAGPCLLLRELQGPLNPSKDEEEEDCAQEDEEDQDSEFVDAEELCSGGIKAGSLPGRLRVSIPDENTGQKCTVSGRFPLTGSWWRVKVRVVKPPRSKIYQAQGFPFYYLQPDMSPPGQKHICSLFLKDCAYERRDDFIKWIEKVSSFKNLNFENLRETLRNFDRQTGQKNKKQSTQNEQDAVRLPVEKSFPFVSVMTALQFPKVMEFLPTLFPRHFRRLISSSSAEVLQKIDDILGTEPWKLGFRRVTYREMKLLSCEASWTAFSQCPSLLQLMTALHKNALVIYSKLKQICREDGHTCVEVKDLTLAVSDYMPFQEACDSLEFMKNLDVVTYEKDCVFLSELYQAEQGIASSICELMNRPQWRLQVDVKHVLASICNSKAKDSESKEALEEGEPEEAGLEQSESLSAPKDSGDCVRNDGRPEMNTEINDVPLDQDQVAALEMICANAVTVLSGKGGCGKTTIVSHLFKHVEQLEEREVWQACKDFEEDRDASEEWLAFPKQSPAAEDKAVEVLLTAPTGKAAGLLRQRTDLPAYTLYQVNYSFYYWKKFKADKPWKFSTVRVLVVDEGSLVSVGIFKSVLKLLCEHAKLSKLIILGDIRQLPSIEPGNMLQDVFETLRSRGCAIELKTNHRTESQLIVDNATRISRRQFPKFDAELNTSDNPTLPISIQDKTFIFVRLPEEDGSSQSSNGEQRSNLYSAIKALLQGKDFENAKTSQFIAFRRQDCDLINDCCAKHYTDHLIKDHKRRLIFAVNDKICCTRNAYLADLIPGKVQKACGKGSDAALSDAAPSDAVPSDAAPSGDPPSDFEIMQDFENGIRLCNGEIFFITKDITDITFQARRLLTISNEAGLEVTVDFDKLVRHCQIRHAWARTVHTFQGSEENTVAYVLGKAGRQHWQHVYTAVTRGRSRVYVIAQESELRSAIRKGSFPRKTRLKHFLQKQLSSACASPADFPSQPSSPEIGGTPSSQPPATPLRRTPDKRATTNHARGEASAAKEKFAFDKRWLSTSFNDMDTDEESEQPRGSKRTGDGFPFDEESPSKFCVVEKPSPQVSSVFQNLRLNNPIRRQLFKPTDDQEMVESDVVAHIDNPSSQEADTGQS
SIO_010081: Helb
subclass of: SO_0000673
so part of: Helb
location: complement(join(2552372..2552542,2557603..2558100,2560046..2560189,2560875..2561136,2561901..2561960,2563201..2563282,2566654..2566808,2570098..2570239,2571403..2571574,2573965..2574843,2576732..2576901,2578217..2578606,2580540..2580717))
location: region:2552372-2580717:-1
so has part: feature:2580540-2580717:-1:exon
so has part: feature:2578217-2578606:-1:exon
so has part: feature:2576732-2576901:-1:exon
so has part: feature:2573965-2574843:-1:exon
so has part: feature:2571403-2571574:-1:exon
so has part: feature:2570098-2570239:-1:exon
so has part: feature:2566654-2566808:-1:exon
so has part: feature:2563201-2563282:-1:exon
so has part: feature:2561901-2561960:-1:exon
so has part: feature:2560875-2561136:-1:exon
so has part: feature:2560046-2560189:-1:exon
so has part: feature:2557603-2558100:-1:exon
so has part: feature:2552372-2552542:-1:exon

XP_005357990.1
type: Protein
SIO_000068: ncbiprotein

position:2552372:-1
position: 2552372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2580540-2580717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2578217-2578606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2576732-2576901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2573965-2574843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2571403-2571574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2570098-2570239:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2566654-2566808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2563201-2563282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2561901-2561960:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2560875-2561136:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2560046-2560189:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2557603-2558100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2552372-2552542:-1:exon

Irak3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Irak3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2610082..2669153)
location: region:2610082-2669153:-1
so has part: feature:2610082-2669153:-1:exon
subclass of: SO_0000010

101982313
type: Gene
SIO_000068: ncbigene

position:2610082:-1
position: 2610082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669153:-1
position: 2669153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2610082-2669153:-1:exon

Irak3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Irak3
product: interleukin 1 receptor associated kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357919.3
SIO_010081: Irak3
subclass of: SO_0000673
so part of: Irak3
location: complement(join(2610082..2611991,2613806..2613970,2614059..2614121,2614803..2615001,2627965..2628083,2628819..2628933,2639272..2639336,2643261..2643412,2644845..2644899,2645464..2645579,2651590..2651772,2668887..2669153))
location: region:2610082-2669153:-1
so has part: feature:2668887-2669153:-1:exon
so has part: feature:2651590-2651772:-1:exon
so has part: feature:2645464-2645579:-1:exon
so has part: feature:2644845-2644899:-1:exon
so has part: feature:2643261-2643412:-1:exon
so has part: feature:2639272-2639336:-1:exon
so has part: feature:2628819-2628933:-1:exon
so has part: feature:2627965-2628083:-1:exon
so has part: feature:2614803-2615001:-1:exon
so has part: feature:2614059-2614121:-1:exon
so has part: feature:2613806-2613970:-1:exon
so has part: feature:2610082-2611991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2668887-2669153:-1:exon

position:2668887:-1
position: 2668887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2651590-2651772:-1:exon

position:2651590:-1
position: 2651590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651772:-1
position: 2651772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2645464-2645579:-1:exon

position:2645464:-1
position: 2645464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2645579:-1
position: 2645579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2644845-2644899:-1:exon

position:2644845:-1
position: 2644845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2644899:-1
position: 2644899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2643261-2643412:-1:exon

position:2643261:-1
position: 2643261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2643412:-1
position: 2643412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2639272-2639336:-1:exon

position:2639272:-1
position: 2639272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2639336:-1
position: 2639336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2628819-2628933:-1:exon

position:2628819:-1
position: 2628819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2628933:-1
position: 2628933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2627965-2628083:-1:exon

position:2627965:-1
position: 2627965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2628083:-1
position: 2628083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2614803-2615001:-1:exon

position:2614803:-1
position: 2614803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2615001:-1
position: 2615001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2614059-2614121:-1:exon

position:2614059:-1
position: 2614059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614121:-1
position: 2614121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2613806-2613970:-1:exon

position:2613806:-1
position: 2613806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2613970:-1
position: 2613970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2610082-2611991:-1:exon

position:2611991:-1
position: 2611991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Irak3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Irak3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-associated kinase 3
translation: MAGLCGTRGALSAHTLLFDLPPALLGELCAILDSCDGPLGWRGLAERLSNSWLDVRHIEKYVDQGKSGTRELLWSWAQKNKTIGDLLQILQEMGHQRAIHLITNYGASAHPSAPRHQELRFPNVSPNALPNAQHVYKGNDPGPLEPAKVTEDHVLAPEHNEKGVLHQPSISFQSIIEGTKHFHKDFLIGEGEIFEVYKVEIQNQTYAVKLFKQEKKLQFKKHWKRFLSELEVFLLFRHPHILELAAYFTEMEKLCLVHPYMSNGTLFDRLQCAGNTAPLSWHVRISVLIGTSKAIRYLHNTQPCSVICGNISSTNILLDDQFQPRLTDFAMAHFRPHFEHHSSTINTTGSGRKHLWYMPEEYIRQGRLSVKTDVYSFGIVIMEVLTGCKVLLDNPKHVQLRDLLVELMEKRGLDSCLSFLDRKIQPCPRNFSAKLFSLAGQCAATRAKLRPTMDEVLNALESAEPSLYFAEDPPTSLKSFRCPSPLFLDNVPSIPVEDDESQNIHPGPHERALRTDKVTQKAPFECSQSEVTFLGLDRNARSERSEVACDMPSSSCEGCWPPELAAASQDLRPTEITLGSSWEVPDHSFGSKPMEKRYSSGLFCSEYEQSEKQ
SIO_010081: Irak3
subclass of: SO_0000673
so part of: Irak3
location: complement(join(2611515..2611991,2613806..2613970,2614059..2614121,2614803..2615001,2627965..2628083,2628819..2628933,2639272..2639336,2643261..2643412,2644845..2644899,2645464..2645579,2651590..2651772,2668887..2669019))
location: region:2611515-2669019:-1
so has part: feature:2668887-2669019:-1:exon
so has part: feature:2651590-2651772:-1:exon
so has part: feature:2645464-2645579:-1:exon
so has part: feature:2644845-2644899:-1:exon
so has part: feature:2643261-2643412:-1:exon
so has part: feature:2639272-2639336:-1:exon
so has part: feature:2628819-2628933:-1:exon
so has part: feature:2627965-2628083:-1:exon
so has part: feature:2614803-2615001:-1:exon
so has part: feature:2614059-2614121:-1:exon
so has part: feature:2613806-2613970:-1:exon
so has part: feature:2611515-2611991:-1:exon

XP_005357976.1
type: Protein
SIO_000068: ncbiprotein

position:2611515:-1
position: 2611515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669019:-1
position: 2669019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2668887-2669019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2651590-2651772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2645464-2645579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2644845-2644899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2643261-2643412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2639272-2639336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2628819-2628933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2627965-2628083:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2614803-2615001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2614059-2614121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2613806-2613970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2611515-2611991:-1:exon

Tmbim4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmbim4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2676314..2692467
location: region:2676314-2692467:1
so has part: feature:2676314-2692467:1:exon
subclass of: SO_0000010

101986862
type: Gene
SIO_000068: ncbigene

position:2676314:1
position: 2676314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692467:1
position: 2692467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676314-2692467:1:exon

Tmbim4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmbim4
product: transmembrane BAX inhibitor motif containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784629.1
SIO_010081: Tmbim4
subclass of: SO_0000673
so part of: Tmbim4
location: join(2676314..2676501,2682955..2683057,2687010..2687056,2689046..2689163,2691169..2691214,2692176..2692467)
location: region:2676314-2692467:1
so has part: feature:2676314-2676501:1:exon
so has part: feature:2682955-2683057:1:exon
so has part: feature:2687010-2687056:1:exon
so has part: feature:2689046-2689163:1:exon
so has part: feature:2691169-2691214:1:exon
so has part: feature:2692176-2692467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2676314-2676501:1:exon

position:2676501:1
position: 2676501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2682955-2683057:1:exon

position:2682955:1
position: 2682955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683057:1
position: 2683057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2687010-2687056:1:exon

position:2687010:1
position: 2687010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2687056:1
position: 2687056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2689046-2689163:1:exon

position:2689046:1
position: 2689046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2689163:1
position: 2689163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2691169-2691214:1:exon

position:2691169:1
position: 2691169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691214:1
position: 2691214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2692176-2692467:1:exon

position:2692176:1
position: 2692176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmbim4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmbim4
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2687020..2687022,aa:OTHER)
product: LOW QUALITY PROTEIN: protein lifeguard 4
translation: MADTDPRYPCSSIEDDFNYGSCVASASVHIRMAFLRKVYSILSLQVLLTTVTSAVFLYFEAVRTFVHFFSXTLLEALTVATVVTFYDVYLVLQAFILTTAVFLGLTAYTLQSKRDFSKFGAGLFAVLWILFLAGFLKVFFHSEVVELVLASLGALLFCGFIIYDTHALMYKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVSKK
SIO_010081: Tmbim4
subclass of: SO_0000673
so part of: Tmbim4
location: join(2676405..2676501,2682955..2683057,2687010..2687056,2689046..2689163,2691169..2691214,2692176..2692382)
location: region:2676405-2692382:1
so has part: feature:2676405-2676501:1:exon
so has part: feature:2682955-2683057:1:exon
so has part: feature:2687010-2687056:1:exon
so has part: feature:2689046-2689163:1:exon
so has part: feature:2691169-2691214:1:exon
so has part: feature:2692176-2692382:1:exon

XP_026640430.1
type: Protein
SIO_000068: ncbiprotein

position:2676405:1
position: 2676405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692382:1
position: 2692382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676405-2676501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2682955-2683057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2687010-2687056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2689046-2689163:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691169-2691214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2692176-2692382:1:exon

Llph
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Llph
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2703652..2708775
location: region:2703652-2708775:1
so has part: feature:2703652-2708775:1:exon
subclass of: SO_0000010

101982598
type: Gene
SIO_000068: ncbigene

position:2703652:1
position: 2703652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708775:1
position: 2708775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2703652-2708775:1:exon

Llph
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Llph
product: LLP homolog, long-term synaptic facilitation factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_005357920.3
SIO_010081: Llph
subclass of: SO_0000673
so part of: Llph
location: join(2703652..2703749,2704802..2705013,2708175..2708775)
location: region:2703652-2708775:1
so has part: feature:2703652-2703749:1:exon
so has part: feature:2704802-2705013:1:exon
so has part: feature:2708175-2708775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2703652-2703749:1:exon

position:2703749:1
position: 2703749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2704802-2705013:1:exon

position:2704802:1
position: 2704802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2705013:1
position: 2705013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2708175-2708775:1:exon

position:2708175:1
position: 2708175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Llph
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Llph
product: LLP homolog, long-term synaptic facilitation factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005357921.3
SIO_010081: Llph
subclass of: SO_0000673
so part of: Llph
location: join(2703801..2704311,2704802..2705013,2708175..2708775)
location: region:2703801-2708775:1
so has part: feature:2703801-2704311:1:exon
so has part: feature:2704802-2705013:1:exon
so has part: feature:2708175-2708775:1:exon

position:2703801:1
position: 2703801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2703801-2704311:1:exon

position:2704311:1
position: 2704311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2704802-2705013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2708175-2708775:1:exon

Llph
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Llph
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LLP homolog
translation: MAKSLRSKWKRKMRAEKRKKNAPRELNRLKSILRVDGDALMKDVEEIATVVVPKQCQEKMQCAVEGEKDDMKMETEIKRNRKTLLDEHGQYPIWMNQRQRKRLKAKREKKRGKSRAKAAKGLAW
SIO_010081: Llph
subclass of: SO_0000673
so part of: Llph
location: join(2704809..2705013,2708175..2708344)
location: region:2704809-2708344:1
so has part: feature:2704809-2705013:1:exon
so has part: feature:2708175-2708344:1:exon

XP_005357977.1
type: Protein
SIO_000068: ncbiprotein

position:2704809:1
position: 2704809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708344:1
position: 2708344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704809-2705013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2708175-2708344:1:exon

Llph
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Llph
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LLP homolog
translation: MAKSLRSKWKRKMRAEKRKKNAPRELNRLKSILRVDGDALMKDVEEIATVVVPKQCQEKMQCAVEGEKDDMKMETEIKRNRKTLLDEHGQYPIWMNQRQRKRLKAKREKKRGKSRAKAAKGLAW
SIO_010081: Llph
subclass of: SO_0000673
so part of: Llph
location: join(2704809..2705013,2708175..2708344)
location: region:2704809-2708344:1
so has part: feature:2704809-2705013:1:exon
so has part: feature:2708175-2708344:1:exon

XP_005357978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2704809-2705013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2708175-2708344:1:exon

Hmga2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hmga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2842168..2954958)
location: region:2842168-2954958:-1
so has part: feature:2842168-2954958:-1:exon
subclass of: SO_0000010

101987147
type: Gene
SIO_000068: ncbigene

position:2842168:-1
position: 2842168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954958:-1
position: 2954958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2842168-2954958:-1:exon

Hmga2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hmga2
product: high mobility group AT-hook 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784603.1
SIO_010081: Hmga2
subclass of: SO_0000673
so part of: Hmga2
location: complement(join(2842168..2842232,2854457..2854489,2941893..2941943,2952213..2952299,2954840..2954958))
location: region:2842168-2954958:-1
so has part: feature:2954840-2954958:-1:exon
so has part: feature:2952213-2952299:-1:exon
so has part: feature:2941893-2941943:-1:exon
so has part: feature:2854457-2854489:-1:exon
so has part: feature:2842168-2842232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2954840-2954958:-1:exon

position:2954840:-1
position: 2954840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2952213-2952299:-1:exon

position:2952213:-1
position: 2952213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952299:-1
position: 2952299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2941893-2941943:-1:exon

position:2941893:-1
position: 2941893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941943:-1
position: 2941943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2854457-2854489:-1:exon

position:2854457:-1
position: 2854457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2854489:-1
position: 2854489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2842168-2842232:-1:exon

position:2842232:-1
position: 2842232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hmga2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hmga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein HMGI-C
translation: MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTCEPSPKRPRGRPKGSKNKSPSKAAQKKAEAIGEKRPRGRPRKWPQQVVQKKPAQEETEETSSQESAEED
SIO_010081: Hmga2
subclass of: SO_0000673
so part of: Hmga2
location: complement(join(2842185..2842232,2854457..2854489,2941893..2941943,2952213..2952299,2954840..2954950))
location: region:2842185-2954950:-1
so has part: feature:2954840-2954950:-1:exon
so has part: feature:2952213-2952299:-1:exon
so has part: feature:2941893-2941943:-1:exon
so has part: feature:2854457-2854489:-1:exon
so has part: feature:2842185-2842232:-1:exon

XP_026640404.1
type: Protein
SIO_000068: ncbiprotein

position:2842185:-1
position: 2842185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954950:-1
position: 2954950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2954840-2954950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2952213-2952299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2941893-2941943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2854457-2854489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2842185-2842232:-1:exon

Msrb3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Msrb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3287901..3408751)
location: region:3287901-3408751:-1
so has part: feature:3287901-3408751:-1:exon
subclass of: SO_0000010

113455432
type: Gene
SIO_000068: ncbigene

position:3287901:-1
position: 3287901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408751:-1
position: 3408751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3287901-3408751:-1:exon

Msrb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Msrb3
product: methionine sulfoxide reductase B3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005357922.3
SIO_010081: Msrb3
subclass of: SO_0000673
so part of: Msrb3
location: complement(join(3287901..3290981,3298321..3298418,3333544..3333572,3359486..3359563,3361164..3361272,3377377..3377502,3408508..3408751))
location: region:3287901-3408751:-1
so has part: feature:3408508-3408751:-1:exon
so has part: feature:3377377-3377502:-1:exon
so has part: feature:3361164-3361272:-1:exon
so has part: feature:3359486-3359563:-1:exon
so has part: feature:3333544-3333572:-1:exon
so has part: feature:3298321-3298418:-1:exon
so has part: feature:3287901-3290981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3408508-3408751:-1:exon

position:3408508:-1
position: 3408508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3377377-3377502:-1:exon

position:3377377:-1
position: 3377377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3377502:-1
position: 3377502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3361164-3361272:-1:exon

position:3361164:-1
position: 3361164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3361272:-1
position: 3361272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3359486-3359563:-1:exon

position:3359486:-1
position: 3359486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3359563:-1
position: 3359563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3333544-3333572:-1:exon

position:3333544:-1
position: 3333544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3333572:-1
position: 3333572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3298321-3298418:-1:exon

position:3298321:-1
position: 3298321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3298418:-1
position: 3298418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3287901-3290981:-1:exon

position:3290981:-1
position: 3290981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Msrb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Msrb3
product: methionine sulfoxide reductase B3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013350274.2
SIO_010081: Msrb3
subclass of: SO_0000673
so part of: Msrb3
location: complement(join(3287901..3290981,3298321..3298418,3333544..3333572,3359486..3359563,3361164..3361272,3377377..3377502,3402981..3403013))
location: region:3287901-3403013:-1
so has part: feature:3402981-3403013:-1:exon
so has part: feature:3377377-3377502:-1:exon
so has part: feature:3361164-3361272:-1:exon
so has part: feature:3359486-3359563:-1:exon
so has part: feature:3333544-3333572:-1:exon
so has part: feature:3298321-3298418:-1:exon
so has part: feature:3287901-3290981:-1:exon

position:3403013:-1
position: 3403013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3402981-3403013:-1:exon

position:3402981:-1
position: 3402981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3377377-3377502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3361164-3361272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3359486-3359563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3333544-3333572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3298321-3298418:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3287901-3290981:-1:exon

Msrb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Msrb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine-R-sulfoxide reductase B3 isoform X1
translation: MPPAAPSVARSREGGGRRTAAAARLPRSVRRTLPRPLALYLCLCLATAAASTLPAFAPGFASRFVAEDITVMSAFNLLHLVTKSQPVALRACGLPSGSCRDKKNCKVAFSQEELRKRLTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKYDSGSGWPSFHDVISSEAIEFTDDFSYGMHRVETSCSQCGAHLGHIFDDGPRPTGKRYCINSASLSFTPTDSSEAEGGSGRASSGRASSSPASADRAEL
SIO_010081: Msrb3
subclass of: SO_0000673
so part of: Msrb3
location: complement(join(3290796..3290981,3298321..3298418,3333544..3333572,3359486..3359563,3361164..3361272,3377377..3377502,3408508..3408670))
location: region:3290796-3408670:-1
so has part: feature:3408508-3408670:-1:exon
so has part: feature:3377377-3377502:-1:exon
so has part: feature:3361164-3361272:-1:exon
so has part: feature:3359486-3359563:-1:exon
so has part: feature:3333544-3333572:-1:exon
so has part: feature:3298321-3298418:-1:exon
so has part: feature:3290796-3290981:-1:exon

XP_005357979.2
type: Protein
SIO_000068: ncbiprotein

position:3290796:-1
position: 3290796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408670:-1
position: 3408670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3408508-3408670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3377377-3377502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3361164-3361272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3359486-3359563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3333544-3333572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3298321-3298418:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3290796-3290981:-1:exon

Msrb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Msrb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine-R-sulfoxide reductase B3 isoform X2
translation: MSAFNLLHLVTKSQPVALRACGLPSGSCRDKKNCKVAFSQEELRKRLTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKYDSGSGWPSFHDVISSEAIEFTDDFSYGMHRVETSCSQCGAHLGHIFDDGPRPTGKRYCINSASLSFTPTDSSEAEGGSGRASSGRASSSPASADRAEL
SIO_010081: Msrb3
subclass of: SO_0000673
so part of: Msrb3
location: complement(join(3290796..3290981,3298321..3298418,3333544..3333572,3359486..3359563,3361164..3361272,3377377..3377452))
location: region:3290796-3377452:-1
so has part: feature:3377377-3377452:-1:exon
so has part: feature:3361164-3361272:-1:exon
so has part: feature:3359486-3359563:-1:exon
so has part: feature:3333544-3333572:-1:exon
so has part: feature:3298321-3298418:-1:exon
so has part: feature:3290796-3290981:-1:exon

XP_013205728.1
type: Protein
SIO_000068: ncbiprotein

position:3377452:-1
position: 3377452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3377377-3377452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3361164-3361272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3359486-3359563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3333544-3333572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3298321-3298418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3290796-3290981:-1:exon

Lemd3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lemd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3438585..>3484996)
location: region:3438585-3484996:-1
so has part: feature:3438585-3484996:-1:exon
subclass of: SO_0000010

101983549
type: Gene
SIO_000068: ncbigene

position:3438585:-1
position: 3438585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3484996:-1
position: 3484996
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3438585-3484996:-1:exon

Lemd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lemd3
product: LEM domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005357923.3
SIO_010081: Lemd3
subclass of: SO_0000673
so part of: Lemd3
location: complement(join(3438585..3440723,3440919..3440997,3441089..3441194,3441750..3441831,3444056..3444234,3444897..3444999,3445109..3445210,3446843..3446988,3447078..3447157,3457646..3457713,3459871..3459937,3462916..3462953,3484006..>3484996))
location: region:3438585-3484996:-1
so has part: feature:3484006-3484996:-1:exon
so has part: feature:3462916-3462953:-1:exon
so has part: feature:3459871-3459937:-1:exon
so has part: feature:3457646-3457713:-1:exon
so has part: feature:3447078-3447157:-1:exon
so has part: feature:3446843-3446988:-1:exon
so has part: feature:3445109-3445210:-1:exon
so has part: feature:3444897-3444999:-1:exon
so has part: feature:3444056-3444234:-1:exon
so has part: feature:3441750-3441831:-1:exon
so has part: feature:3441089-3441194:-1:exon
so has part: feature:3440919-3440997:-1:exon
so has part: feature:3438585-3440723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3484006-3484996:-1:exon

position:3484006:-1
position: 3484006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3462916-3462953:-1:exon

position:3462916:-1
position: 3462916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3462953:-1
position: 3462953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3459871-3459937:-1:exon

position:3459871:-1
position: 3459871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3459937:-1
position: 3459937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3457646-3457713:-1:exon

position:3457646:-1
position: 3457646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3457713:-1
position: 3457713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3447078-3447157:-1:exon

position:3447078:-1
position: 3447078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3447157:-1
position: 3447157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3446843-3446988:-1:exon

position:3446843:-1
position: 3446843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3446988:-1
position: 3446988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3445109-3445210:-1:exon

position:3445109:-1
position: 3445109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445210:-1
position: 3445210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3444897-3444999:-1:exon

position:3444897:-1
position: 3444897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444999:-1
position: 3444999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3444056-3444234:-1:exon

position:3444056:-1
position: 3444056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444234:-1
position: 3444234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3441750-3441831:-1:exon

position:3441750:-1
position: 3441750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3441831:-1
position: 3441831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3441089-3441194:-1:exon

position:3441089:-1
position: 3441089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3441194:-1
position: 3441194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3440919-3440997:-1:exon

position:3440919:-1
position: 3440919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3440997:-1
position: 3440997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3438585-3440723:-1:exon

position:3440723:-1
position: 3440723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lemd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lemd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inner nuclear membrane protein Man1
translation: PAPLAASEVTNSGHPAERRKPHSWWGARRPGASEPQPPSGNDGAAEDVDEEVGDGGDERDTEADEPLWAGRAVNGSRLLPYSCREHYSDSEEEDDGDVASGRQVLKDDSLARHRPRRSHSKPFSALTAKSGGSRQETSVQGGGGQAMNDRAAAAGSLDRSRTLEEAAAEPGGGCDPVDSSPIPRFRAGAKKLAPPIPDMDSTLESPTGSLHKTNNHIGGGAFGVESPSVYANSLPPSAAAATPPSLRINHANHTGSNHTYLKKAYGKPKLCEPEEELLQQFKREEVSPTGSFSAHYLSMFLLTAACLFFLILGLTYLGMRGTGAPADGGLLKNPFDETFGKIQESERGLLMSTLYRLHDRLAQLAGDHECGSSSQRMLSVQEAAAYLKDLDPEYEDVFNTSLLWILKNGKDVGIRCIGYGPEEELANITDVQFLQSTRPQMPFWCRFRRAFITVTHRLLLLCLGVVMVCVVLRYMKYRWTKEEEETRQMYDMVVKIIDVLRSHNEACQENKDLQPYMPIPHVRDSLIQPQDRKKMKKVWDRAVDFLAANESRVRTETRRIGGADFLVWRWIQPSASCDKILVIPSKVWQGQAFHLDRRNSPPNSLTPCLKIRNMFDPVMEIGDQWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKCLSPEYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSHLRLRTGLANSQGSS
SIO_010081: Lemd3
subclass of: SO_0000673
so part of: Lemd3
location: complement(join(3440560..3440723,3440919..3440997,3441089..3441194,3441750..3441831,3444056..3444234,3444897..3444999,3445109..3445210,3446843..3446988,3447078..3447157,3457646..3457713,3459871..3459937,3462916..3462953,3484006..>3484996))
location: region:3440560-3484996:-1
so has part: feature:3484006-3484996:-1:exon
so has part: feature:3462916-3462953:-1:exon
so has part: feature:3459871-3459937:-1:exon
so has part: feature:3457646-3457713:-1:exon
so has part: feature:3447078-3447157:-1:exon
so has part: feature:3446843-3446988:-1:exon
so has part: feature:3445109-3445210:-1:exon
so has part: feature:3444897-3444999:-1:exon
so has part: feature:3444056-3444234:-1:exon
so has part: feature:3441750-3441831:-1:exon
so has part: feature:3441089-3441194:-1:exon
so has part: feature:3440919-3440997:-1:exon
so has part: feature:3440560-3440723:-1:exon

XP_005357980.2
type: Protein
SIO_000068: ncbiprotein

position:3440560:-1
position: 3440560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3484006-3484996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3462916-3462953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3459871-3459937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3457646-3457713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3447078-3447157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3446843-3446988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3445109-3445210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3444897-3444999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3444056-3444234:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3441750-3441831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3441089-3441194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3440919-3440997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3440560-3440723:-1:exon

Wif1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Wif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3547061..3614080
location: region:3547061-3614080:1
so has part: feature:3547061-3614080:1:exon
subclass of: SO_0000010

101983820
type: Gene
SIO_000068: ncbigene

position:3547061:1
position: 3547061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3614080:1
position: 3614080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547061-3614080:1:exon

Wif1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Wif1
product: WNT inhibitory factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357924.2
SIO_010081: Wif1
subclass of: SO_0000673
so part of: Wif1
location: join(3547061..3547513,3547954..3548093,3589465..3589573,3596309..3596449,3597238..3597333,3598659..3598754,3603729..3603824,3609676..3609771,3610342..3610437,3613239..3614080)
location: region:3547061-3614080:1
so has part: feature:3547061-3547513:1:exon
so has part: feature:3547954-3548093:1:exon
so has part: feature:3589465-3589573:1:exon
so has part: feature:3596309-3596449:1:exon
so has part: feature:3597238-3597333:1:exon
so has part: feature:3598659-3598754:1:exon
so has part: feature:3603729-3603824:1:exon
so has part: feature:3609676-3609771:1:exon
so has part: feature:3610342-3610437:1:exon
so has part: feature:3613239-3614080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3547061-3547513:1:exon

position:3547513:1
position: 3547513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3547954-3548093:1:exon

position:3547954:1
position: 3547954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3548093:1
position: 3548093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3589465-3589573:1:exon

position:3589465:1
position: 3589465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3589573:1
position: 3589573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3596309-3596449:1:exon

position:3596309:1
position: 3596309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3596449:1
position: 3596449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3597238-3597333:1:exon

position:3597238:1
position: 3597238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3597333:1
position: 3597333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3598659-3598754:1:exon

position:3598659:1
position: 3598659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3598754:1
position: 3598754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3603729-3603824:1:exon

position:3603729:1
position: 3603729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603824:1
position: 3603824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3609676-3609771:1:exon

position:3609676:1
position: 3609676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3609771:1
position: 3609771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3610342-3610437:1:exon

position:3610342:1
position: 3610342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3610437:1
position: 3610437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3613239-3614080:1:exon

position:3613239:1
position: 3613239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Wif1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Wif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wnt inhibitory factor 1
translation: MARRSAVPAFALWLWSILPCLLLLRADAGQPPEESLYLWIDAHQARVLIGFEEDILIVSEGKMAPFTHDFRKAQQRMPAIPVNIHSMNFTWQAVGQAEYFYEFLSLRSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVNVIVMNSEGNTILQTPQNAIFFKTCQQAECPGGCRNGGFCNERRVCECPDGFYGPHCEKALCIPRCLNGGLCVTPGFCICPPGFYGVNCDKANCSTTCLNGGTCFYPGKCICPPGLQGELCEMSKCPQPCRNGGKCIGKSKCKCPKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCREGWHGRHCNKRYGASLMHAPRPAGARQEQHTPPLKKAEEPRDPPESNYIW
SIO_010081: Wif1
subclass of: SO_0000673
so part of: Wif1
location: join(3547366..3547513,3547954..3548093,3589465..3589573,3596309..3596449,3597238..3597333,3598659..3598754,3603729..3603824,3609676..3609771,3610342..3610437,3613239..3613360)
location: region:3547366-3613360:1
so has part: feature:3547366-3547513:1:exon
so has part: feature:3547954-3548093:1:exon
so has part: feature:3589465-3589573:1:exon
so has part: feature:3596309-3596449:1:exon
so has part: feature:3597238-3597333:1:exon
so has part: feature:3598659-3598754:1:exon
so has part: feature:3603729-3603824:1:exon
so has part: feature:3609676-3609771:1:exon
so has part: feature:3610342-3610437:1:exon
so has part: feature:3613239-3613360:1:exon

XP_005357981.1
type: Protein
SIO_000068: ncbiprotein

position:3547366:1
position: 3547366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3613360:1
position: 3613360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547366-3547513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3547954-3548093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3589465-3589573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3596309-3596449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3597238-3597333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3598659-3598754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3603729-3603824:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3609676-3609771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3610342-3610437:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3613239-3613360:1:exon

Tbc1d30
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tbc1d30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3763038..3842447)
location: region:3763038-3842447:-1
so has part: feature:3763038-3842447:-1:exon
subclass of: SO_0000010

101984111
type: Gene
SIO_000068: ncbigene

position:3763038:-1
position: 3763038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3842447:-1
position: 3842447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3763038-3842447:-1:exon

Tbc1d30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tbc1d30
product: TBC1 domain family member 30, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784546.1
SIO_010081: Tbc1d30
subclass of: SO_0000673
so part of: Tbc1d30
location: complement(join(3763038..3764325,3767613..3767819,3771223..3771362,3772194..3772306,3780454..3780559,3786611..3786779,3788378..3788546,3792894..3793079,3795325..3795450,3797237..3797302,3798278..3798339,3838666..3838830,3842084..3842447))
location: region:3763038-3842447:-1
so has part: feature:3842084-3842447:-1:exon
so has part: feature:3838666-3838830:-1:exon
so has part: feature:3798278-3798339:-1:exon
so has part: feature:3797237-3797302:-1:exon
so has part: feature:3795325-3795450:-1:exon
so has part: feature:3792894-3793079:-1:exon
so has part: feature:3788378-3788546:-1:exon
so has part: feature:3786611-3786779:-1:exon
so has part: feature:3780454-3780559:-1:exon
so has part: feature:3772194-3772306:-1:exon
so has part: feature:3771223-3771362:-1:exon
so has part: feature:3767613-3767819:-1:exon
so has part: feature:3763038-3764325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3842084-3842447:-1:exon

position:3842084:-1
position: 3842084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3838666-3838830:-1:exon

position:3838666:-1
position: 3838666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3838830:-1
position: 3838830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3798278-3798339:-1:exon

position:3798278:-1
position: 3798278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3798339:-1
position: 3798339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3797237-3797302:-1:exon

position:3797237:-1
position: 3797237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3797302:-1
position: 3797302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3795325-3795450:-1:exon

position:3795325:-1
position: 3795325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3795450:-1
position: 3795450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3792894-3793079:-1:exon

position:3792894:-1
position: 3792894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3793079:-1
position: 3793079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3788378-3788546:-1:exon

position:3788378:-1
position: 3788378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3788546:-1
position: 3788546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3786611-3786779:-1:exon

position:3786611:-1
position: 3786611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3786779:-1
position: 3786779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3780454-3780559:-1:exon

position:3780454:-1
position: 3780454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780559:-1
position: 3780559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3772194-3772306:-1:exon

position:3772194:-1
position: 3772194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772306:-1
position: 3772306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3771223-3771362:-1:exon

position:3771223:-1
position: 3771223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3771362:-1
position: 3771362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3767613-3767819:-1:exon

position:3767613:-1
position: 3767613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767819:-1
position: 3767819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3763038-3764325:-1:exon

position:3764325:-1
position: 3764325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tbc1d30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tbc1d30
product: TBC1 domain family member 30, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005357925.3
SIO_010081: Tbc1d30
subclass of: SO_0000673
so part of: Tbc1d30
location: complement(join(3763038..3764325,3767613..3767819,3771223..3771362,3772194..3772306,3780454..3780559,3786611..3786779,3788378..3788546,3792894..3793079,3795325..3795450,3797237..3797302,3798278..3798339,3802094..3802664))
location: region:3763038-3802664:-1
so has part: feature:3802094-3802664:-1:exon
so has part: feature:3798278-3798339:-1:exon
so has part: feature:3797237-3797302:-1:exon
so has part: feature:3795325-3795450:-1:exon
so has part: feature:3792894-3793079:-1:exon
so has part: feature:3788378-3788546:-1:exon
so has part: feature:3786611-3786779:-1:exon
so has part: feature:3780454-3780559:-1:exon
so has part: feature:3772194-3772306:-1:exon
so has part: feature:3771223-3771362:-1:exon
so has part: feature:3767613-3767819:-1:exon
so has part: feature:3763038-3764325:-1:exon

position:3802664:-1
position: 3802664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3802094-3802664:-1:exon

position:3802094:-1
position: 3802094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3798278-3798339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3797237-3797302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3795325-3795450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3792894-3793079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3788378-3788546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3786611-3786779:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3780454-3780559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3772194-3772306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3771223-3771362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3767613-3767819:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3763038-3764325:-1:exon

Tbc1d30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tbc1d30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 30 isoform X2
translation: MEVLPAGRTQEPLLQAEAAAEHSAAEGDEEPQPHGRTSRTASLVSGLLIELYSCTEEDEVAAGGDRASRSRPRRSDSLDSSTETSGSDVFLGGRGVGDSRVLQELRERPSLRLQMQYLRQKDSSELRTILRELKYRIGIQSAKLLRQLKQKDRLLHKVQKNCDIVTACLQAVSQKRRADTKLKFTLEPSLGQNGFQQWYDALKAVARLSTGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSNPDDDLMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVMEGNEGDALKIMIYLIDKVLPESYFVNNLRALSVDMAVFRDLLRMKLPELSQHLDALQRTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEVILRVSLAIWAKLGEQIECCETADDFYSTMGRLTQEMLENDLLQSHELMQTVYSMAPFPFPQLAELREKYTYNITPFPVTVKPMSVSGRHGKARDSDEEHEPDDEDAVASAVGCLGPFSGFLAPELQKYQKQIKETSEEQSLRSNNIAELSPGAINSCRSEYHAAFNSMMMERMTTDINALKRQYSRIKKKQQQQLHQVYIRADKGPVTSILPSQVNNSPVINHLLLGKKMKITNRATKNAVIHIPGHAGGKMSPVPYEDLKTKLNSPWRTHIRVHKKNTPRTKSHLGCGDTVGLIEEQNEGCRASGLGAAEEFPSSCAATARGEGSSCAGGTPRTIEGQSPEPVFGDADVVDVAAVQVKLEALELNQRDAPAETEPKEHLPCQQHAPESAGGPGEHQAPSNPLPVSNSKAPIFSPFPSVKPLRKSATARNLGLYGPTERTPTMHFPQISRSFNKSATGSSSSSTKKR
SIO_010081: Tbc1d30
subclass of: SO_0000673
so part of: Tbc1d30
location: complement(join(3763529..3764325,3767613..3767819,3771223..3771362,3772194..3772306,3780454..3780559,3786611..3786779,3788378..3788546,3792894..3793079,3795325..3795450,3797237..3797302,3798278..3798339,3838666..3838830,3842084..3842447))
location: region:3763529-3842447:-1
so has part: feature:3842084-3842447:-1:exon
so has part: feature:3838666-3838830:-1:exon
so has part: feature:3798278-3798339:-1:exon
so has part: feature:3797237-3797302:-1:exon
so has part: feature:3795325-3795450:-1:exon
so has part: feature:3792894-3793079:-1:exon
so has part: feature:3788378-3788546:-1:exon
so has part: feature:3786611-3786779:-1:exon
so has part: feature:3780454-3780559:-1:exon
so has part: feature:3772194-3772306:-1:exon
so has part: feature:3771223-3771362:-1:exon
so has part: feature:3767613-3767819:-1:exon
so has part: feature:3763529-3764325:-1:exon

XP_026640347.1
type: Protein
SIO_000068: ncbiprotein

position:3763529:-1
position: 3763529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3842084-3842447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3838666-3838830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3798278-3798339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3797237-3797302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3795325-3795450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3792894-3793079:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3788378-3788546:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3786611-3786779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3780454-3780559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3772194-3772306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3771223-3771362:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3767613-3767819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3763529-3764325:-1:exon

Tbc1d30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tbc1d30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 30 isoform X1
translation: MRQDKLTSSLRRGGRCQKRQGGGGGGVGTILSNVLKKRSCISRTAPRLLCTLEPGADTKLKFTLEPSLGQNGFQQWYDALKAVARLSTGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSNPDDDLMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVMEGNEGDALKIMIYLIDKVLPESYFVNNLRALSVDMAVFRDLLRMKLPELSQHLDALQRTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEVILRVSLAIWAKLGEQIECCETADDFYSTMGRLTQEMLENDLLQSHELMQTVYSMAPFPFPQLAELREKYTYNITPFPVTVKPMSVSGRHGKARDSDEEHEPDDEDAVASAVGCLGPFSGFLAPELQKYQKQIKETSEEQSLRSNNIAELSPGAINSCRSEYHAAFNSMMMERMTTDINALKRQYSRIKKKQQQQLHQVYIRADKGPVTSILPSQVNNSPVINHLLLGKKMKITNRATKNAVIHIPGHAGGKMSPVPYEDLKTKLNSPWRTHIRVHKKNTPRTKSHLGCGDTVGLIEEQNEGCRASGLGAAEEFPSSCAATARGEGSSCAGGTPRTIEGQSPEPVFGDADVVDVAAVQVKLEALELNQRDAPAETEPKEHLPCQQHAPESAGGPGEHQAPSNPLPVSNSKAPIFSPFPSVKPLRKSATARNLGLYGPTERTPTMHFPQISRSFNKSATGSSSSSTKKR
SIO_010081: Tbc1d30
subclass of: SO_0000673
so part of: Tbc1d30
location: complement(join(3763529..3764325,3767613..3767819,3771223..3771362,3772194..3772306,3780454..3780559,3786611..3786779,3788378..3788546,3792894..3793079,3795325..3795450,3797237..3797302,3798278..3798339,3802094..3802256))
location: region:3763529-3802256:-1
so has part: feature:3802094-3802256:-1:exon
so has part: feature:3798278-3798339:-1:exon
so has part: feature:3797237-3797302:-1:exon
so has part: feature:3795325-3795450:-1:exon
so has part: feature:3792894-3793079:-1:exon
so has part: feature:3788378-3788546:-1:exon
so has part: feature:3786611-3786779:-1:exon
so has part: feature:3780454-3780559:-1:exon
so has part: feature:3772194-3772306:-1:exon
so has part: feature:3771223-3771362:-1:exon
so has part: feature:3767613-3767819:-1:exon
so has part: feature:3763529-3764325:-1:exon

XP_005357982.1
type: Protein
SIO_000068: ncbiprotein

position:3802256:-1
position: 3802256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3802094-3802256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3798278-3798339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3797237-3797302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3795325-3795450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3792894-3793079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3788378-3788546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3786611-3786779:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3780454-3780559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3772194-3772306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3771223-3771362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3767613-3767819:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3763529-3764325:-1:exon

Gns
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3861241..3897361
location: region:3861241-3897361:1
so has part: feature:3861241-3897361:1:exon
subclass of: SO_0000010

101984390
type: Gene
SIO_000068: ncbigene

position:3861241:1
position: 3861241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897361:1
position: 3897361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3861241-3897361:1:exon

Gns
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gns
product: glucosamine (N-acetyl)-6-sulfatase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005357926.3
SIO_010081: Gns
subclass of: SO_0000673
so part of: Gns
location: join(3861241..3861488,3867201..3867260,3870429..3870635,3872156..3872221,3872587..3872685,3874425..3874592,3876792..3876874,3877984..3878102,3880096..3880199,3887433..3887534,3890317..3890424,3891062..3891172,3892318..3892478,3895134..3897361)
location: region:3861241-3897361:1
so has part: feature:3861241-3861488:1:exon
so has part: feature:3867201-3867260:1:exon
so has part: feature:3870429-3870635:1:exon
so has part: feature:3872156-3872221:1:exon
so has part: feature:3872587-3872685:1:exon
so has part: feature:3874425-3874592:1:exon
so has part: feature:3876792-3876874:1:exon
so has part: feature:3877984-3878102:1:exon
so has part: feature:3880096-3880199:1:exon
so has part: feature:3887433-3887534:1:exon
so has part: feature:3890317-3890424:1:exon
so has part: feature:3891062-3891172:1:exon
so has part: feature:3892318-3892478:1:exon
so has part: feature:3895134-3897361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3861241-3861488:1:exon

position:3861488:1
position: 3861488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3867201-3867260:1:exon

position:3867201:1
position: 3867201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3867260:1
position: 3867260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3870429-3870635:1:exon

position:3870429:1
position: 3870429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870635:1
position: 3870635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3872156-3872221:1:exon

position:3872156:1
position: 3872156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3872221:1
position: 3872221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3872587-3872685:1:exon

position:3872587:1
position: 3872587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3872685:1
position: 3872685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3874425-3874592:1:exon

position:3874425:1
position: 3874425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3874592:1
position: 3874592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3876792-3876874:1:exon

position:3876792:1
position: 3876792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3876874:1
position: 3876874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3877984-3878102:1:exon

position:3877984:1
position: 3877984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3878102:1
position: 3878102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3880096-3880199:1:exon

position:3880096:1
position: 3880096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3880199:1
position: 3880199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3887433-3887534:1:exon

position:3887433:1
position: 3887433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3887534:1
position: 3887534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3890317-3890424:1:exon

position:3890317:1
position: 3890317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3890424:1
position: 3890424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3891062-3891172:1:exon

position:3891062:1
position: 3891062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3891172:1
position: 3891172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3892318-3892478:1:exon

position:3892318:1
position: 3892318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3892478:1
position: 3892478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3895134-3897361:1:exon

position:3895134:1
position: 3895134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gns
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylglucosamine-6-sulfatase
translation: MRLVSAAWPRPGRSPAVLLLLSLLGSCLGLVGAARRPNVLLLLTDDQDAELGGMTPLKKTKALIGEKGMTFSSAYVPSALCCPSRASILTGKYPHNHHVVNNTLEGNCSSKSWQKIQEPSTFPAILRSMCGYQTFFAGKYLNEYGAPDAGGLEHVPLGWSYWYALEKNSKYYNYTLSINGKARRHGENYSTDYLTDVLANLSLDFLDYKSNSEPFFMMISTPAPHSPWTAAPQYQKAFQNVFAPRNKNFNIHGTNKHWLIRQAKTPMTNSSIQFLDDAFRRRWQTLLSVDDLVEKLVKRLDVTGELDNTYIFYTSDNGYHTGQFSLPIDKRQLYEFDIKVPLLVRGPGIKPNQTSKMLVSNIDLGPTILDLAGYDLNKTQMDGVSLVPILKGASNLTWRSDVLVEYQGEGRNITDPTCPSLSPGVSQCFPDCVCEDAYNNTYACVRTLSSLWNLQYCEFDDQEVFVEVYNITADPDQITNIAKTIDPELLGKMNYRLMMLQSCSGPTCRTPGVFDPGYRFDLRLMFSNHGSVRTRRFSKHPL
SIO_010081: Gns
subclass of: SO_0000673
so part of: Gns
location: join(3861327..3861488,3867201..3867260,3870429..3870635,3872156..3872221,3872587..3872685,3874425..3874592,3876792..3876874,3877984..3878102,3880096..3880199,3887433..3887534,3890317..3890424,3891062..3891172,3892318..3892478,3895134..3895212)
location: region:3861327-3895212:1
so has part: feature:3861327-3861488:1:exon
so has part: feature:3867201-3867260:1:exon
so has part: feature:3870429-3870635:1:exon
so has part: feature:3872156-3872221:1:exon
so has part: feature:3872587-3872685:1:exon
so has part: feature:3874425-3874592:1:exon
so has part: feature:3876792-3876874:1:exon
so has part: feature:3877984-3878102:1:exon
so has part: feature:3880096-3880199:1:exon
so has part: feature:3887433-3887534:1:exon
so has part: feature:3890317-3890424:1:exon
so has part: feature:3891062-3891172:1:exon
so has part: feature:3892318-3892478:1:exon
so has part: feature:3895134-3895212:1:exon

XP_005357983.1
type: Protein
SIO_000068: ncbiprotein

position:3861327:1
position: 3861327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3895212:1
position: 3895212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3861327-3861488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3867201-3867260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3870429-3870635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3872156-3872221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3872587-3872685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3874425-3874592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3876792-3876874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3877984-3878102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3880096-3880199:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3887433-3887534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3890317-3890424:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3891062-3891172:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3892318-3892478:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3895134-3895212:1:exon

Rassf3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rassf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3913263..3974692)
location: region:3913263-3974692:-1
so has part: feature:3913263-3974692:-1:exon
subclass of: SO_0000010

101984865
type: Gene
SIO_000068: ncbigene

position:3913263:-1
position: 3913263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3974692:-1
position: 3974692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3913263-3974692:-1:exon

Rassf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rassf3
product: Ras association domain family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026784624.1
SIO_010081: Rassf3
subclass of: SO_0000673
so part of: Rassf3
location: complement(join(3913263..3914507,3916563..3916672,3918177..3918414,3919264..3919371,3974407..3974692))
location: region:3913263-3974692:-1
so has part: feature:3974407-3974692:-1:exon
so has part: feature:3919264-3919371:-1:exon
so has part: feature:3918177-3918414:-1:exon
so has part: feature:3916563-3916672:-1:exon
so has part: feature:3913263-3914507:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3974407-3974692:-1:exon

position:3974407:-1
position: 3974407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3919264-3919371:-1:exon

position:3919264:-1
position: 3919264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919371:-1
position: 3919371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3918177-3918414:-1:exon

position:3918177:-1
position: 3918177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3918414:-1
position: 3918414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3916563-3916672:-1:exon

position:3916563:-1
position: 3916563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916672:-1
position: 3916672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3913263-3914507:-1:exon

position:3914507:-1
position: 3914507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rassf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rassf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras association domain-containing protein 3
translation: MSSGYSSLEEDAEDFFFTARTSFFRRAPPGKSRSGQPDVEKEKETHNYLSKEEIKEKVHKYNLAVTDKLKMTLNSNGIYTGFIKVQMELCKPTQTPASPGRPPPSSRECVNTLHISSTNTVGEVIEALLKKFLVTESPSKFALYKRCHREDQVYACKLSDREHPLYLRLVAGPRTDTLSFVLREHEIGEWEAFSLPELQNFLRILDKEEDEQLQSLKRRYTAYRQKLEEALGEVWKPG
SIO_010081: Rassf3
subclass of: SO_0000673
so part of: Rassf3
location: complement(join(3914358..3914507,3916563..3916672,3918177..3918414,3919264..3919371,3974407..3974517))
location: region:3914358-3974517:-1
so has part: feature:3974407-3974517:-1:exon
so has part: feature:3919264-3919371:-1:exon
so has part: feature:3918177-3918414:-1:exon
so has part: feature:3916563-3916672:-1:exon
so has part: feature:3914358-3914507:-1:exon

XP_026640425.1
type: Protein
SIO_000068: ncbiprotein

position:3914358:-1
position: 3914358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3974517:-1
position: 3974517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3974407-3974517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3919264-3919371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3918177-3918414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3916563-3916672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3914358-3914507:-1:exon

Tbk1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tbk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4058324..4097835)
location: region:4058324-4097835:-1
so has part: feature:4058324-4097835:-1:exon
subclass of: SO_0000010

101985159
type: Gene
SIO_000068: ncbigene

position:4058324:-1
position: 4058324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097835:-1
position: 4097835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4058324-4097835:-1:exon

Tbk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tbk1
product: TANK binding kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784545.1
SIO_010081: Tbk1
subclass of: SO_0000673
so part of: Tbk1
location: complement(join(4058324..4059087,4062069..4062140,4062480..4062586,4063077..4063173,4063284..4063385,4064056..4064095,4064621..4064697,4064792..4064913,4066877..4067057,4071273..4071364,4071695..4071753,4073500..4073696,4075589..4075768,4077852..4077962,4081365..4081525,4083587..4083768,4087053..4087182,4090551..4090691,4095023..4095138,4097754..4097835))
location: region:4058324-4097835:-1
so has part: feature:4097754-4097835:-1:exon
so has part: feature:4095023-4095138:-1:exon
so has part: feature:4090551-4090691:-1:exon
so has part: feature:4087053-4087182:-1:exon
so has part: feature:4083587-4083768:-1:exon
so has part: feature:4081365-4081525:-1:exon
so has part: feature:4077852-4077962:-1:exon
so has part: feature:4075589-4075768:-1:exon
so has part: feature:4073500-4073696:-1:exon
so has part: feature:4071695-4071753:-1:exon
so has part: feature:4071273-4071364:-1:exon
so has part: feature:4066877-4067057:-1:exon
so has part: feature:4064792-4064913:-1:exon
so has part: feature:4064621-4064697:-1:exon
so has part: feature:4064056-4064095:-1:exon
so has part: feature:4063284-4063385:-1:exon
so has part: feature:4063077-4063173:-1:exon
so has part: feature:4062480-4062586:-1:exon
so has part: feature:4062069-4062140:-1:exon
so has part: feature:4058324-4059087:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4097754-4097835:-1:exon

position:4097754:-1
position: 4097754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4095023-4095138:-1:exon

position:4095023:-1
position: 4095023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4095138:-1
position: 4095138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4090551-4090691:-1:exon

position:4090551:-1
position: 4090551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4090691:-1
position: 4090691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4087053-4087182:-1:exon

position:4087053:-1
position: 4087053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4087182:-1
position: 4087182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4083587-4083768:-1:exon

position:4083587:-1
position: 4083587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4083768:-1
position: 4083768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4081365-4081525:-1:exon

position:4081365:-1
position: 4081365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4081525:-1
position: 4081525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4077852-4077962:-1:exon

position:4077852:-1
position: 4077852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4077962:-1
position: 4077962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4075589-4075768:-1:exon

position:4075589:-1
position: 4075589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4075768:-1
position: 4075768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4073500-4073696:-1:exon

position:4073500:-1
position: 4073500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073696:-1
position: 4073696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4071695-4071753:-1:exon

position:4071695:-1
position: 4071695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071753:-1
position: 4071753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4071273-4071364:-1:exon

position:4071273:-1
position: 4071273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071364:-1
position: 4071364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4066877-4067057:-1:exon

position:4066877:-1
position: 4066877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4067057:-1
position: 4067057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4064792-4064913:-1:exon

position:4064792:-1
position: 4064792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064913:-1
position: 4064913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4064621-4064697:-1:exon

position:4064621:-1
position: 4064621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064697:-1
position: 4064697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4064056-4064095:-1:exon

position:4064056:-1
position: 4064056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064095:-1
position: 4064095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4063284-4063385:-1:exon

position:4063284:-1
position: 4063284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4063385:-1
position: 4063385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4063077-4063173:-1:exon

position:4063077:-1
position: 4063077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4063173:-1
position: 4063173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4062480-4062586:-1:exon

position:4062480:-1
position: 4062480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4062586:-1
position: 4062586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4062069-4062140:-1:exon

position:4062069:-1
position: 4062069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4062140:-1
position: 4062140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4058324-4059087:-1:exon

position:4059087:-1
position: 4059087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tbk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tbk1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(4067006..4067008),aa:OTHER)
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase TBK1
translation: MQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLYAVKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRDIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQTLLTPVLANILEADQEKCWGFDQFFAETSDVLHRMIIHVFSLQQMTAHKIYIHSYNTAAVFHELVYKQTKINSANQELIYEGRRLVLELGRLAQHFPKTTEENPIFVVSREPLSTIGLKYEKISLPKVHPRYDLDGDASMAKAVTGVVCYACRIASTLLLYQELMRKGIRWLIFLLSDYSNKIHFINYLXKSIFVTLIRFLMCFSYRYEKLMKINLETAELGEISDIHTKLLRLSSSQGTIESGLQDIDSRLSPGGSLADTWAHQEGTHPKDRNVEKLQVLLNCITEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATKAMSHFTEECVKKYEAFLAKSEEWMRKMFLLRKQLLSLTNQCFDIEEEVSKYQDYTNELQETLPQKLLAASSGAQHAMAPIYPSSNTLVEMTLGMKKLKEEMEGVVKELAENNHILERFGALTMDGGLRNVDCL
SIO_010081: Tbk1
subclass of: SO_0000673
so part of: Tbk1
location: complement(join(4059036..4059087,4062069..4062140,4062480..4062586,4063077..4063173,4063284..4063385,4064056..4064095,4064621..4064697,4064792..4064913,4066877..4067057,4071273..4071364,4071695..4071753,4073500..4073696,4075589..4075768,4077852..4077962,4081365..4081525,4083587..4083768,4087053..4087182,4090551..4090691,4095023..4095109))
location: region:4059036-4095109:-1
so has part: feature:4095023-4095109:-1:exon
so has part: feature:4090551-4090691:-1:exon
so has part: feature:4087053-4087182:-1:exon
so has part: feature:4083587-4083768:-1:exon
so has part: feature:4081365-4081525:-1:exon
so has part: feature:4077852-4077962:-1:exon
so has part: feature:4075589-4075768:-1:exon
so has part: feature:4073500-4073696:-1:exon
so has part: feature:4071695-4071753:-1:exon
so has part: feature:4071273-4071364:-1:exon
so has part: feature:4066877-4067057:-1:exon
so has part: feature:4064792-4064913:-1:exon
so has part: feature:4064621-4064697:-1:exon
so has part: feature:4064056-4064095:-1:exon
so has part: feature:4063284-4063385:-1:exon
so has part: feature:4063077-4063173:-1:exon
so has part: feature:4062480-4062586:-1:exon
so has part: feature:4062069-4062140:-1:exon
so has part: feature:4059036-4059087:-1:exon

XP_026640346.1
type: Protein
SIO_000068: ncbiprotein

position:4059036:-1
position: 4059036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4095109:-1
position: 4095109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4095023-4095109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4090551-4090691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4087053-4087182:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4083587-4083768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4081365-4081525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4077852-4077962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4075589-4075768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4073500-4073696:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4071695-4071753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4071273-4071364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4066877-4067057:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4064792-4064913:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4064621-4064697:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4064056-4064095:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4063284-4063385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4063077-4063173:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4062480-4062586:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4062069-4062140:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4059036-4059087:-1:exon

Xpot
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Xpot
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4101113..4142422)
location: region:4101113-4142422:-1
so has part: feature:4101113-4142422:-1:exon
subclass of: SO_0000010

101985441
type: Gene
SIO_000068: ncbigene

position:4101113:-1
position: 4101113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4142422:-1
position: 4142422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4101113-4142422:-1:exon

Xpot
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Xpot
product: exportin for tRNA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005357930.2
SIO_010081: Xpot
subclass of: SO_0000673
so part of: Xpot
location: complement(join(4101113..4101659,4103886..4103942,4106578..4106649,4112596..4112643,4113683..4113798,4113948..4114064,4115103..4115292,4117610..4117895,4118737..4118975,4119689..4119758,4120383..4120477,4120728..4120847,4121082..4121226,4121685..4121809,4123496..4123558,4124283..4124321,4125486..4125722,4128140..4128308,4128408..4128592,4130196..4130414,4131279..4131348,4131792..4131848,4133565..4133647,4138077..4138210,4142062..4142422))
location: region:4101113-4142422:-1
so has part: feature:4142062-4142422:-1:exon
so has part: feature:4138077-4138210:-1:exon
so has part: feature:4133565-4133647:-1:exon
so has part: feature:4131792-4131848:-1:exon
so has part: feature:4131279-4131348:-1:exon
so has part: feature:4130196-4130414:-1:exon
so has part: feature:4128408-4128592:-1:exon
so has part: feature:4128140-4128308:-1:exon
so has part: feature:4125486-4125722:-1:exon
so has part: feature:4124283-4124321:-1:exon
so has part: feature:4123496-4123558:-1:exon
so has part: feature:4121685-4121809:-1:exon
so has part: feature:4121082-4121226:-1:exon
so has part: feature:4120728-4120847:-1:exon
so has part: feature:4120383-4120477:-1:exon
so has part: feature:4119689-4119758:-1:exon
so has part: feature:4118737-4118975:-1:exon
so has part: feature:4117610-4117895:-1:exon
so has part: feature:4115103-4115292:-1:exon
so has part: feature:4113948-4114064:-1:exon
so has part: feature:4113683-4113798:-1:exon
so has part: feature:4112596-4112643:-1:exon
so has part: feature:4106578-4106649:-1:exon
so has part: feature:4103886-4103942:-1:exon
so has part: feature:4101113-4101659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4142062-4142422:-1:exon

position:4142062:-1
position: 4142062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4138077-4138210:-1:exon

position:4138077:-1
position: 4138077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4138210:-1
position: 4138210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4133565-4133647:-1:exon

position:4133565:-1
position: 4133565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133647:-1
position: 4133647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4131792-4131848:-1:exon

position:4131792:-1
position: 4131792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131848:-1
position: 4131848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4131279-4131348:-1:exon

position:4131279:-1
position: 4131279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131348:-1
position: 4131348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4130196-4130414:-1:exon

position:4130196:-1
position: 4130196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4130414:-1
position: 4130414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4128408-4128592:-1:exon

position:4128408:-1
position: 4128408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4128592:-1
position: 4128592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4128140-4128308:-1:exon

position:4128140:-1
position: 4128140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4128308:-1
position: 4128308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4125486-4125722:-1:exon

position:4125486:-1
position: 4125486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4125722:-1
position: 4125722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4124283-4124321:-1:exon

position:4124283:-1
position: 4124283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4124321:-1
position: 4124321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4123496-4123558:-1:exon

position:4123496:-1
position: 4123496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4123558:-1
position: 4123558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4121685-4121809:-1:exon

position:4121685:-1
position: 4121685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4121809:-1
position: 4121809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4121082-4121226:-1:exon

position:4121082:-1
position: 4121082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4121226:-1
position: 4121226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4120728-4120847:-1:exon

position:4120728:-1
position: 4120728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4120847:-1
position: 4120847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4120383-4120477:-1:exon

position:4120383:-1
position: 4120383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4120477:-1
position: 4120477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4119689-4119758:-1:exon

position:4119689:-1
position: 4119689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4119758:-1
position: 4119758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4118737-4118975:-1:exon

position:4118737:-1
position: 4118737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4118975:-1
position: 4118975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4117610-4117895:-1:exon

position:4117610:-1
position: 4117610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4117895:-1
position: 4117895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4115103-4115292:-1:exon

position:4115103:-1
position: 4115103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4115292:-1
position: 4115292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4113948-4114064:-1:exon

position:4113948:-1
position: 4113948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114064:-1
position: 4114064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4113683-4113798:-1:exon

position:4113683:-1
position: 4113683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4113798:-1
position: 4113798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4112596-4112643:-1:exon

position:4112596:-1
position: 4112596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4112643:-1
position: 4112643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4106578-4106649:-1:exon

position:4106578:-1
position: 4106578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4106649:-1
position: 4106649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4103886-4103942:-1:exon

position:4103886:-1
position: 4103886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4103942:-1
position: 4103942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4101113-4101659:-1:exon

position:4101659:-1
position: 4101659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Xpot
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Xpot
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-T
translation: MDEQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQKTHSDDHIKFFCFQVLEHQVKYKYSELSTAQQQLIRETLLSWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTKWPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQCIPNLVESWYQILHNYQYTNSEVLCQCLEVVGAYVSWIDLSLIANDRFINMLLSHMSVEVLREEACDCLFEIVNKGMDPVEKMKLVESLCQVLQTAGFFSIDQEEDLDFVARFSKLVNGMGQSLIVSWTKLIKNGAAKNAQEALEAIETKVPLMLQLLVHEDDDISSNIIGFCYDYLHILKQLSVLSDQQKANIEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSPELVLASVRRVLSATLQNWQTTRFMEVEVAVRLLYMLAEALPVSHGAHFSGDVSKASALQDMMRTLVTSGVSSYQHTSVTLEFFETVVRYEKFFTVEPQHIPCVLMAFLDHRGLWHSSAKVRSRTAYLFSRFVKSLNKQMNPFIEDILNRIQDLLTLSPPENGYQSLLSSDDQLFIYEAAGALIVSSDYPAENKRALMKDLLTPLMERFKVLLEKLMMAQDEERQASLADSLSHAVGFASRTSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPLQKDTLRSGVRTFLHRMIICLEEEVLPFIPSASEHMLKDCEAKDLQEFIPLINQITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPAEDNDQSAALEKQMLRRSYFAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPIAQKTCFIILSKLVELWGGKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLALSECAVTLKTIHLKRGPECVQYLQQEYLPSLQVAPEIIQEFCQALQQPDAKVFKNYLKVFFQRAKP
SIO_010081: Xpot
subclass of: SO_0000673
so part of: Xpot
location: complement(join(4101633..4101659,4103886..4103942,4106578..4106649,4112596..4112643,4113683..4113798,4113948..4114064,4115103..4115292,4117610..4117895,4118737..4118975,4119689..4119758,4120383..4120477,4120728..4120847,4121082..4121226,4121685..4121809,4123496..4123558,4124283..4124321,4125486..4125722,4128140..4128308,4128408..4128592,4130196..4130414,4131279..4131348,4131792..4131848,4133565..4133647,4138077..4138136))
location: region:4101633-4138136:-1
so has part: feature:4138077-4138136:-1:exon
so has part: feature:4133565-4133647:-1:exon
so has part: feature:4131792-4131848:-1:exon
so has part: feature:4131279-4131348:-1:exon
so has part: feature:4130196-4130414:-1:exon
so has part: feature:4128408-4128592:-1:exon
so has part: feature:4128140-4128308:-1:exon
so has part: feature:4125486-4125722:-1:exon
so has part: feature:4124283-4124321:-1:exon
so has part: feature:4123496-4123558:-1:exon
so has part: feature:4121685-4121809:-1:exon
so has part: feature:4121082-4121226:-1:exon
so has part: feature:4120728-4120847:-1:exon
so has part: feature:4120383-4120477:-1:exon
so has part: feature:4119689-4119758:-1:exon
so has part: feature:4118737-4118975:-1:exon
so has part: feature:4117610-4117895:-1:exon
so has part: feature:4115103-4115292:-1:exon
so has part: feature:4113948-4114064:-1:exon
so has part: feature:4113683-4113798:-1:exon
so has part: feature:4112596-4112643:-1:exon
so has part: feature:4106578-4106649:-1:exon
so has part: feature:4103886-4103942:-1:exon
so has part: feature:4101633-4101659:-1:exon

XP_005357987.1
type: Protein
SIO_000068: ncbiprotein

position:4101633:-1
position: 4101633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4138136:-1
position: 4138136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4138077-4138136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4133565-4133647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4131792-4131848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4131279-4131348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4130196-4130414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4128408-4128592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4128140-4128308:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4125486-4125722:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4124283-4124321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4123496-4123558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4121685-4121809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4121082-4121226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4120728-4120847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4120383-4120477:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4119689-4119758:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4118737-4118975:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4117610-4117895:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4115103-4115292:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4113948-4114064:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4113683-4113798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4112596-4112643:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4106578-4106649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4103886-4103942:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4101633-4101659:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 79684
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4143451..4143550
location: region:4143451-4143550:1
so has part: feature:4143451-4143550:1:region

position:4143451:1
position: 4143451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4143550:1
position: 4143550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4143451-4143550:1:region

LOC101984478
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4190661..4244641
location: region:4190661-4244641:1
so has part: feature:4190661-4244641:1:exon

101984478
type: Gene
SIO_000068: ncbigene

position:4190661:1
position: 4190661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4244641:1
position: 4244641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190661-4244641:1:exon

LOC101984478
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984478
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984478
subclass of: SO_0000673
so part of: LOC101984478
location: 4190661..4191041
location: region:4190661-4191041:1
so has part: feature:4190661-4191041:1:exon

position:4191041:1
position: 4191041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190661-4191041:1:exon

LOC101984478
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984478
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984478
subclass of: SO_0000673
so part of: LOC101984478
location: 4243481..4243863
location: region:4243481-4243863:1
so has part: feature:4243481-4243863:1:exon

position:4243481:1
position: 4243481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4243863:1
position: 4243863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4243481-4243863:1:exon

LOC101984478
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984478
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984478
subclass of: SO_0000673
so part of: LOC101984478
location: 4244048..4244641
location: region:4244048-4244641:1
so has part: feature:4244048-4244641:1:exon

position:4244048:1
position: 4244048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4244048-4244641:1:exon

LOC113457377
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4257324..4326303
location: region:4257324-4326303:1
so has part: feature:4257324-4326303:1:exon
subclass of: SO_0000010

113457377
type: Gene
SIO_000068: ncbigene

position:4257324:1
position: 4257324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4326303:1
position: 4326303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4257324-4326303:1:exon

LOC113457377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC113457377
product: HIG1 domain family member 1C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_026784630.1
SIO_010081: LOC113457377
subclass of: SO_0000673
so part of: LOC113457377
location: join(4257324..4257414,4262369..4262546,4326222..4326303)
location: region:4257324-4326303:1
so has part: feature:4257324-4257414:1:exon
so has part: feature:4262369-4262546:1:exon
so has part: feature:4326222-4326303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4257324-4257414:1:exon

position:4257414:1
position: 4257414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4262369-4262546:1:exon

position:4262369:1
position: 4262369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4262546:1
position: 4262546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4326222-4326303:1:exon

position:4326222:1
position: 4326222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113457377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC113457377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIG1 domain family member 1C-like
translation: MPSDEWSAAEDEGQLSRLLRKSRDSPFVPVGVAGFVAVLSYGLYKLKSRRDEKLSLRLIHVRVAAQGCAVGAVTLGKVSRGQLSSTDVHRYRPGQARSSPEVTVSELAWLGRQGRG
SIO_010081: LOC113457377
subclass of: SO_0000673
so part of: LOC113457377
location: join(4257324..4257414,4262369..4262546,4326222..4326303)
location: region:4257324-4326303:1
so has part: feature:4257324-4257414:1:exon
so has part: feature:4262369-4262546:1:exon
so has part: feature:4326222-4326303:1:exon

XP_026640431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4257324-4257414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4262369-4262546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4326222-4326303:1:exon

Ppm1h
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ppm1h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4326746..4595355
location: region:4326746-4595355:1
so has part: feature:4326746-4595355:1:exon
subclass of: SO_0000010

101987427
type: Gene
SIO_000068: ncbigene

position:4326746:1
position: 4326746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4595355:1
position: 4595355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4326746-4595355:1:exon

Ppm1h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ppm1h
product: protein phosphatase, Mg2+/Mn2+ dependent 1H
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_026784469.1
SIO_010081: Ppm1h
subclass of: SO_0000673
so part of: Ppm1h
location: join(4326746..4327003,4438175..4438337,4457250..4457594,4467483..4467595,4511204..4511288,4530161..4530279,4555826..4555889,4560050..4560157,4576077..4576228,4593745..4595355)
location: region:4326746-4595355:1
so has part: feature:4326746-4327003:1:exon
so has part: feature:4438175-4438337:1:exon
so has part: feature:4457250-4457594:1:exon
so has part: feature:4467483-4467595:1:exon
so has part: feature:4511204-4511288:1:exon
so has part: feature:4530161-4530279:1:exon
so has part: feature:4555826-4555889:1:exon
so has part: feature:4560050-4560157:1:exon
so has part: feature:4576077-4576228:1:exon
so has part: feature:4593745-4595355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4326746-4327003:1:exon

position:4327003:1
position: 4327003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4438175-4438337:1:exon

position:4438175:1
position: 4438175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4438337:1
position: 4438337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4457250-4457594:1:exon

position:4457250:1
position: 4457250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4457594:1
position: 4457594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4467483-4467595:1:exon

position:4467483:1
position: 4467483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4467595:1
position: 4467595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4511204-4511288:1:exon

position:4511204:1
position: 4511204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4511288:1
position: 4511288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4530161-4530279:1:exon

position:4530161:1
position: 4530161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4530279:1
position: 4530279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4555826-4555889:1:exon

position:4555826:1
position: 4555826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4555889:1
position: 4555889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4560050-4560157:1:exon

position:4560050:1
position: 4560050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4560157:1
position: 4560157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4576077-4576228:1:exon

position:4576077:1
position: 4576077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4576228:1
position: 4576228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4593745-4595355:1:exon

position:4593745:1
position: 4593745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ppm1h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ppm1h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1H
translation: MLTRVKSAVANFMGGIMAGSSGSEHGGSGCGGSDLPLRFPYGRPEFLGLSQDEVECSADHIARPILILKETRRLPWATGYAEVINAGKSTHNEDQASCEVLTVKKKIGTMTSTPNRNSKRRSSLPNGEGLQLKENSESEGISCHYWSLFDGHAGSGAAVVASRLLQHHITQQLQEIVEILKNSAILPPTCLGEEPESTPAHGRTLTRAASLRGGVGAPGSPSTPPTRFFTEKKIPHECLVIGALESAFKEMDLQIERERTAYNISGGCTALIVLCLLGKLYVANAGDSRAIIIRNGEVIPMSSEFTPETERQRLQYLAFMQPHLLGNEFTHLEFPRRVQRKELGKKMLYRDFNMTGWAYKTIEDDDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVHDSNIYIKPFLSSAPEVRVYDLSRYEHGADDVLILATDGLWDVLSNEEVAEAVTQFLPNCDPDDPHRYTLAAQDLVMRARGVLKDRGWRISNDRLGSGDDISVYVIPLIHGNKLS
SIO_010081: Ppm1h
subclass of: SO_0000673
so part of: Ppm1h
location: join(4326759..4327003,4438175..4438337,4457250..4457594,4467483..4467595,4511204..4511288,4530161..4530279,4555826..4555889,4560050..4560157,4576077..4576228,4593745..4593892)
location: region:4326759-4593892:1
so has part: feature:4326759-4327003:1:exon
so has part: feature:4438175-4438337:1:exon
so has part: feature:4457250-4457594:1:exon
so has part: feature:4467483-4467595:1:exon
so has part: feature:4511204-4511288:1:exon
so has part: feature:4530161-4530279:1:exon
so has part: feature:4555826-4555889:1:exon
so has part: feature:4560050-4560157:1:exon
so has part: feature:4576077-4576228:1:exon
so has part: feature:4593745-4593892:1:exon

XP_026640270.1
type: Protein
SIO_000068: ncbiprotein

position:4326759:1
position: 4326759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4593892:1
position: 4593892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4326759-4327003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438175-4438337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4457250-4457594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4467483-4467595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4511204-4511288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530161-4530279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4555826-4555889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4560050-4560157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4576077-4576228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4593745-4593892:1:exon

Mon2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4643251..4720111)
location: region:4643251-4720111:-1
so has part: feature:4643251-4720111:-1:exon
subclass of: SO_0000010

101987699
type: Gene
SIO_000068: ncbigene

position:4643251:-1
position: 4643251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4720111:-1
position: 4720111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4643251-4720111:-1:exon

Mon2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mon2
product: MON2 homolog, regulator of endosome-to-Golgi trafficking, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_013350285.2
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
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urn:…
SIO_000300: 1
SIO_000628: feature:4719617-4720111:-1:exon

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urn:…
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SIO_000628: feature:4711481-4711544:-1:exon

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urn:…
SIO_000300: 3
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urn:…
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urn:…
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SIO_000628: feature:4694976-4695101:-1:exon

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urn:…
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SIO_000300: 12
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SIO_000300: 14
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urn:…
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urn:…
SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 19
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urn:…
SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 29
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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urn:…
SIO_000300: 33
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urn:…
SIO_000300: 34
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urn:…
SIO_000300: 35
SIO_000628: feature:4643251-4644988:-1:exon

position:4644988:-1
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reference: sequence
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Mon2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mon2
product: MON2 homolog, regulator of endosome-to-Golgi trafficking, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005357937.3
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4643251..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4659499..4659516,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4675707..4675709,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4711481..4711544,4719617..4720111))
location: region:4643251-4720111:-1
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so has part: feature:4649393-4649475:-1:exon
so has part: feature:4643251-4644988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4719617-4720111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711481-4711544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4705051-4705178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4704508-4704639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4699524-4699653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4696085-4696179:-1:exon

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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:4693664-4693858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689555-4689679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4688981-4689117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4687692-4687845:-1:exon

urn:…
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SIO_000628: feature:4685687-4685913:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4683625-4683706:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4682720-4682904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4681412-4681524:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4680605-4680709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4680235-4680315:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4680084-4680157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4679910-4680000:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4676519-4676620:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4675707-4675709:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4675426-4675536:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4671297-4671472:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4669123-4669285:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4667337-4667630:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4666310-4666508:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4662784-4663409:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4660097-4660240:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4659499-4659516:-1:exon

position:4659499:-1
position: 4659499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659516:-1
position: 4659516
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:4659086-4659214:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4657805-4657995:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4656682-4656742:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4655654-4655777:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4652397-4652604:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4649393-4649475:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4643251-4644988:-1:exon

Mon2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mon2
product: MON2 homolog, regulator of endosome-to-Golgi trafficking, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005357939.3
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4643251..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4711481..4711544,4719617..4719727))
location: region:4643251-4719727:-1
so has part: feature:4719617-4719727:-1:exon
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position:4719727:-1
position: 4719727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 34
SIO_000628: feature:4643251-4644988:-1:exon

Mon2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mon2
product: MON2 homolog, regulator of endosome-to-Golgi trafficking, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005357938.2
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4643251..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4659499..4659516,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4711481..4711544,4719617..4719727))
location: region:4643251-4719727:-1
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urn:…
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urn:…
SIO_000300: 35
SIO_000628: feature:4643251-4644988:-1:exon

Mon2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mon2
product: MON2 homolog, regulator of endosome-to-Golgi trafficking, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013350287.2
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4643251..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4659499..4659516,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4675707..4675709,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4708701..4709120))
location: region:4643251-4709120:-1
so has part: feature:4708701-4709120:-1:exon
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position:4709120:-1
position: 4709120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4708701-4709120:-1:exon

position:4708701:-1
position: 4708701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 35
SIO_000628: feature:4643251-4644988:-1:exon

Mon2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MON2 homolog isoform X4
translation: MSGTNSPEAVKKLLENMQSDLRALSLECKKKFPPVKEAAESGIIKVKTIAARNTEILAALKENSSEVVQPFLMGCGTKEPKITQLCLAAIQRLMSHEVVSETAAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHDEALSKAIVLCFRLHFTKDNITNNTAAATVRQVVTVVFERMVAEDERHSDIEPPVLVQGNSNRRSVSTLKPCAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVIKLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDADKPQWLRAVAVESIHRLCVQPHLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPAAANQAGNNNAGGPVSAPASSGMVGIGGGVTLLPAFEYRGTWIPILTITVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHCLLDLVRGITTMIEGELGEAETECPAVVQEAHSESSEQRDVQSVSDPADKETVSRAVWEEMVSACWCGLLAALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNATTAATLSNKSYSIQGHSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQHLVWILGLKPSGGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEVCQHPNSRMREWGAEALTSLIKAGLTFNHEPPLTQNQRLQLLLLNPLKEMSSINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVMGAIRNDQGESLIRTAFQCLQLVVTDFLPTMPCSCLQIVVDVAGSFGLHNQELNISLTSIGLLWNISDYFFQRGETIEKELNKEEAAQQKQAEEKGVSLNRPFHPAPPFDCLWLCLYAKLGELCVDPRPAVRKSAGQTLFSTIGAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADKEKIESGGGNILIHHSRDTAEKQWAETWVLTLAGVARIFNTRRYLLQPLGDFSRAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQLVSPVRDSEKPETPPVVNVPVPVLIGNISGPGLNRPFVRTDSIGDKLGRYSAEPPIVTDELEDLNLWWAAWNTWYKIGSESTKPPVTFDKLTFIPSQPFLTALIQIFPALYQHIKAGFNMDDLHKLGVILHSAVSVPISSDASPFILPSYTEAVLTSLQEAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYGQLETKHIANAKYNQAEWVALNYVPFAERSLEVVVDLYQKTACHKAVVNEKVLQNVIKTLRVPLSLKYSCPSESTWKLAVASLLKVLSIGLPVARQHASSGKFDSMWPELASTLEDFLFTKSIPPDNLSIQEFQRNESIDVEVVQLISAEILPYANLIPKAFVGQMMTMLNRGSIHSQSPSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALTVLLKRSQDVLHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENVDGNTWAQVIALYPTLVECITCSSSEVCSALKEALVPFKDFMQPPASKVQNGES
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4644825..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4711481..4711544,4719617..4719727))
location: region:4644825-4719727:-1
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so has part: feature:4679910-4680000:-1:exon
so has part: feature:4676519-4676620:-1:exon
so has part: feature:4675426-4675536:-1:exon
so has part: feature:4671297-4671472:-1:exon
so has part: feature:4669123-4669285:-1:exon
so has part: feature:4667337-4667630:-1:exon
so has part: feature:4666310-4666508:-1:exon
so has part: feature:4662784-4663409:-1:exon
so has part: feature:4660097-4660240:-1:exon
so has part: feature:4659086-4659214:-1:exon
so has part: feature:4657805-4657995:-1:exon
so has part: feature:4656682-4656742:-1:exon
so has part: feature:4655654-4655777:-1:exon
so has part: feature:4652397-4652604:-1:exon
so has part: feature:4649393-4649475:-1:exon
so has part: feature:4644825-4644988:-1:exon

XP_005357996.1
type: Protein
SIO_000068: ncbiprotein

position:4644825:-1
position: 4644825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4719617-4719727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711481-4711544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4705051-4705178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4704508-4704639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4699524-4699653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4696085-4696179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4694976-4695101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4693664-4693858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689555-4689679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4688981-4689117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4687692-4687845:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4685687-4685913:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4683625-4683706:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4682720-4682904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4681412-4681524:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4680605-4680709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4680235-4680315:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4680084-4680157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4679910-4680000:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4676519-4676620:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4675426-4675536:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4671297-4671472:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4669123-4669285:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4667337-4667630:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4666310-4666508:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4662784-4663409:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4660097-4660240:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4659086-4659214:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4657805-4657995:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4656682-4656742:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4655654-4655777:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4652397-4652604:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4649393-4649475:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4644825-4644988:-1:exon

Mon2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MON2 homolog isoform X2
translation: MSGTNSPEAVKKLLENMQSDLRALSLECKKKFPPVKEAAESGIIKVKTIAARNTEILAALKENSSEVVQPFLMGCGTKEPKITQLCLAAIQRLMSHEVVSETAAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHDEALSKAIVLCFRLHFTKDNITNNTAAATVRQVVTVVFERMVAEDERHSDIEPPVLVQGNSNRRSVSTLKPCAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVIKLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDADKPQWLRAVAVESIHRLCVQPHLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPAAANQAGNNNAGGPVSAPASSGMVGIGGGVTLLPAFEYRGTWIPILTITVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHCLLDLVRGITTMIEGELGEAETECPAVVQEAHSESSEQRDVQSVSDPADKETVSRAVWEEMVSACWCGLLAALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNATTAATLSNKSYSIQGHSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQHLVWILGLKPSGGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEVCQHPNSRMREWGAEALTSLIKAGLTFNHEPPLTQNQRLQLLLLNPLKEMSSINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVMGAIRNDQGESLIRTAFQCLQLVVTDFLPTMPCSCLQIVVDVAGSFGLHNQELNISLTSIGLLWNISDYFFQRGETIEKELNKEEAAQQKQAEEKGVSLNRPFHPAPPFDCLWLCLYAKLGELCVDPRPAVRKSAGQTLFSTIGAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADKEKIESGGGNILIHHSRDTAEKQWAETWVLTLAGVARIFNTRRYLLQPLGDFSRAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQLVSPVRDSEKPETPPVVNVPVPVLIGNISGPGLNRPFVRTDSIGDKLGRYSAEPPIVTDELEDLNLWWAAWNTWYKIGSESTKPPVTFDKLTFIPSQPFLTALIQIFPALYQHIKAGFNMDDLHKLGVILHSAVSVPISSDASPFILPSYTEAVLTSLQEAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYGQLETKHIANAKYNQIQLFAPAEWVALNYVPFAERSLEVVVDLYQKTACHKAVVNEKVLQNVIKTLRVPLSLKYSCPSESTWKLAVASLLKVLSIGLPVARQHASSGKFDSMWPELASTLEDFLFTKSIPPDNLSIQEFQRNESIDVEVVQLISAEILPYANLIPKAFVGQMMTMLNRGSIHSQSPSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALTVLLKRSQDVLHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENVDGNTWAQVIALYPTLVECITCSSSEVCSALKEALVPFKDFMQPPASKVQNGES
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4644825..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4659499..4659516,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4711481..4711544,4719617..4719727))
location: region:4644825-4719727:-1
so has part: feature:4719617-4719727:-1:exon
so has part: feature:4711481-4711544:-1:exon
so has part: feature:4705051-4705178:-1:exon
so has part: feature:4704508-4704639:-1:exon
so has part: feature:4699524-4699653:-1:exon
so has part: feature:4696085-4696179:-1:exon
so has part: feature:4694976-4695101:-1:exon
so has part: feature:4693664-4693858:-1:exon
so has part: feature:4689555-4689679:-1:exon
so has part: feature:4688981-4689117:-1:exon
so has part: feature:4687692-4687845:-1:exon
so has part: feature:4685687-4685913:-1:exon
so has part: feature:4683625-4683706:-1:exon
so has part: feature:4682720-4682904:-1:exon
so has part: feature:4681412-4681524:-1:exon
so has part: feature:4680605-4680709:-1:exon
so has part: feature:4680235-4680315:-1:exon
so has part: feature:4680084-4680157:-1:exon
so has part: feature:4679910-4680000:-1:exon
so has part: feature:4676519-4676620:-1:exon
so has part: feature:4675426-4675536:-1:exon
so has part: feature:4671297-4671472:-1:exon
so has part: feature:4669123-4669285:-1:exon
so has part: feature:4667337-4667630:-1:exon
so has part: feature:4666310-4666508:-1:exon
so has part: feature:4662784-4663409:-1:exon
so has part: feature:4660097-4660240:-1:exon
so has part: feature:4659499-4659516:-1:exon
so has part: feature:4659086-4659214:-1:exon
so has part: feature:4657805-4657995:-1:exon
so has part: feature:4656682-4656742:-1:exon
so has part: feature:4655654-4655777:-1:exon
so has part: feature:4652397-4652604:-1:exon
so has part: feature:4649393-4649475:-1:exon
so has part: feature:4644825-4644988:-1:exon

XP_005357995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4719617-4719727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711481-4711544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4705051-4705178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4704508-4704639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4699524-4699653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4696085-4696179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4694976-4695101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4693664-4693858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689555-4689679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4688981-4689117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4687692-4687845:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4685687-4685913:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4683625-4683706:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4682720-4682904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4681412-4681524:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4680605-4680709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4680235-4680315:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4680084-4680157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4679910-4680000:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4676519-4676620:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4675426-4675536:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4671297-4671472:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4669123-4669285:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4667337-4667630:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4666310-4666508:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4662784-4663409:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4660097-4660240:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4659499-4659516:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4659086-4659214:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4657805-4657995:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4656682-4656742:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4655654-4655777:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4652397-4652604:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4649393-4649475:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4644825-4644988:-1:exon

Mon2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MON2 homolog isoform X3
translation: MSGTNSPEAVKKLLENMQSDLRALSLECKKKFPPVKEAAESGIIKVKTIAARNTEILAALKENSSEVVQPFLMGCGTKEPKITQLCLAAIQRLMSHEVVSETAAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHDEALSKAIVLCFRLHFTKDNITNNTAAATVRQVVTVVFERMVAEDERHSDIEPPVLVQGNSNRRSVSTLKPCAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVIKLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDADKPQWLRAVAVESIHRLCVQPHLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPAAANQAGNNNAGGPVSAPASSGMVGIGGGVTLLPAFEYRGTWIPILTITVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHCLLDLVRGITTMIEGELGEAETECPAVVQEAHSESSEQRDVQSVSDPADKETVSRAVWEEMVSACWCGLLAALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNATTAATLSNKSYSIQGHSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQHLVWILGLKPSGGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEKVCQHPNSRMREWGAEALTSLIKAGLTFNHEPPLTQNQRLQLLLLNPLKEMSSINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVMGAIRNDQGESLIRTAFQCLQLVVTDFLPTMPCSCLQIVVDVAGSFGLHNQELNISLTSIGLLWNISDYFFQRGETIEKELNKEEAAQQKQAEEKGVSLNRPFHPAPPFDCLWLCLYAKLGELCVDPRPAVRKSAGQTLFSTIGAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADKEKIESGGGNILIHHSRDTAEKQWAETWVLTLAGVARIFNTRRYLLQPLGDFSRAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQLVSPVRDSEKPETPPVVNVPVPVLIGNISGPGLNRPFVRTDSIGDKLGRYSAEPPIVTDELEDLNLWWAAWNTWYKIGSESTKPPVTFDKLTFIPSQPFLTALIQIFPALYQHIKAGFNMDDLHKLGVILHSAVSVPISSDASPFILPSYTEAVLTSLQEAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYGQLETKHIANAKYNQAEWVALNYVPFAERSLEVVVDLYQKTACHKAVVNEKVLQNVIKTLRVPLSLKYSCPSESTWKLAVASLLKVLSIGLPVARQHASSGKFDSMWPELASTLEDFLFTKSIPPDNLSIQEFQRNESIDVEVVQLISAEILPYANLIPKAFVGQMMTMLNRGSIHSQSPSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALTVLLKRSQDVLHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENVDGNTWAQVIALYPTLVECITCSSSEVCSALKEALVPFKDFMQPPASKVQNGES
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4644825..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4675707..4675709,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4711481..4711544,4719617..4719727))
location: region:4644825-4719727:-1
so has part: feature:4719617-4719727:-1:exon
so has part: feature:4711481-4711544:-1:exon
so has part: feature:4705051-4705178:-1:exon
so has part: feature:4704508-4704639:-1:exon
so has part: feature:4699524-4699653:-1:exon
so has part: feature:4696085-4696179:-1:exon
so has part: feature:4694976-4695101:-1:exon
so has part: feature:4693664-4693858:-1:exon
so has part: feature:4689555-4689679:-1:exon
so has part: feature:4688981-4689117:-1:exon
so has part: feature:4687692-4687845:-1:exon
so has part: feature:4685687-4685913:-1:exon
so has part: feature:4683625-4683706:-1:exon
so has part: feature:4682720-4682904:-1:exon
so has part: feature:4681412-4681524:-1:exon
so has part: feature:4680605-4680709:-1:exon
so has part: feature:4680235-4680315:-1:exon
so has part: feature:4680084-4680157:-1:exon
so has part: feature:4679910-4680000:-1:exon
so has part: feature:4676519-4676620:-1:exon
so has part: feature:4675707-4675709:-1:exon
so has part: feature:4675426-4675536:-1:exon
so has part: feature:4671297-4671472:-1:exon
so has part: feature:4669123-4669285:-1:exon
so has part: feature:4667337-4667630:-1:exon
so has part: feature:4666310-4666508:-1:exon
so has part: feature:4662784-4663409:-1:exon
so has part: feature:4660097-4660240:-1:exon
so has part: feature:4659086-4659214:-1:exon
so has part: feature:4657805-4657995:-1:exon
so has part: feature:4656682-4656742:-1:exon
so has part: feature:4655654-4655777:-1:exon
so has part: feature:4652397-4652604:-1:exon
so has part: feature:4649393-4649475:-1:exon
so has part: feature:4644825-4644988:-1:exon

XP_013205739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4719617-4719727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711481-4711544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4705051-4705178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4704508-4704639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4699524-4699653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4696085-4696179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4694976-4695101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4693664-4693858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689555-4689679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4688981-4689117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4687692-4687845:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4685687-4685913:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4683625-4683706:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4682720-4682904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4681412-4681524:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4680605-4680709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4680235-4680315:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4680084-4680157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4679910-4680000:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4676519-4676620:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4675707-4675709:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4675426-4675536:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4671297-4671472:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4669123-4669285:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4667337-4667630:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4666310-4666508:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4662784-4663409:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4660097-4660240:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4659086-4659214:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4657805-4657995:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4656682-4656742:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4655654-4655777:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4652397-4652604:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4649393-4649475:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4644825-4644988:-1:exon

Mon2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MON2 homolog isoform X1
translation: MSGTNSPEAVKKLLENMQSDLRALSLECKKKFPPVKEAAESGIIKVKTIAARNTEILAALKENSSEVVQPFLMGCGTKEPKITQLCLAAIQRLMSHEVVSETAAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHDEALSKAIVLCFRLHFTKDNITNNTAAATVRQVVTVVFERMVAEDERHSDIEPPVLVQGNSNRRSVSTLKPCAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVIKLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDADKPQWLRAVAVESIHRLCVQPHLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPAAANQAGNNNAGGPVSAPASSGMVGIGGGVTLLPAFEYRGTWIPILTITVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHCLLDLVRGITTMIEGELGEAETECPAVVQEAHSESSEQRDVQSVSDPADKETVSRAVWEEMVSACWCGLLAALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNATTAATLSNKSYSIQGHSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQHLVWILGLKPSGGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEKVCQHPNSRMREWGAEALTSLIKAGLTFNHEPPLTQNQRLQLLLLNPLKEMSSINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVMGAIRNDQGESLIRTAFQCLQLVVTDFLPTMPCSCLQIVVDVAGSFGLHNQELNISLTSIGLLWNISDYFFQRGETIEKELNKEEAAQQKQAEEKGVSLNRPFHPAPPFDCLWLCLYAKLGELCVDPRPAVRKSAGQTLFSTIGAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADKEKIESGGGNILIHHSRDTAEKQWAETWVLTLAGVARIFNTRRYLLQPLGDFSRAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQLVSPVRDSEKPETPPVVNVPVPVLIGNISGPGLNRPFVRTDSIGDKLGRYSAEPPIVTDELEDLNLWWAAWNTWYKIGSESTKPPVTFDKLTFIPSQPFLTALIQIFPALYQHIKAGFNMDDLHKLGVILHSAVSVPISSDASPFILPSYTEAVLTSLQEAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYGQLETKHIANAKYNQIQLFAPAEWVALNYVPFAERSLEVVVDLYQKTACHKAVVNEKVLQNVIKTLRVPLSLKYSCPSESTWKLAVASLLKVLSIGLPVARQHASSGKFDSMWPELASTLEDFLFTKSIPPDNLSIQEFQRNESIDVEVVQLISAEILPYANLIPKAFVGQMMTMLNRGSIHSQSPSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALTVLLKRSQDVLHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENVDGNTWAQVIALYPTLVECITCSSSEVCSALKEALVPFKDFMQPPASKVQNGES
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4644825..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4659499..4659516,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4675707..4675709,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4711481..4711544,4719617..4719727))
location: region:4644825-4719727:-1
so has part: feature:4719617-4719727:-1:exon
so has part: feature:4711481-4711544:-1:exon
so has part: feature:4705051-4705178:-1:exon
so has part: feature:4704508-4704639:-1:exon
so has part: feature:4699524-4699653:-1:exon
so has part: feature:4696085-4696179:-1:exon
so has part: feature:4694976-4695101:-1:exon
so has part: feature:4693664-4693858:-1:exon
so has part: feature:4689555-4689679:-1:exon
so has part: feature:4688981-4689117:-1:exon
so has part: feature:4687692-4687845:-1:exon
so has part: feature:4685687-4685913:-1:exon
so has part: feature:4683625-4683706:-1:exon
so has part: feature:4682720-4682904:-1:exon
so has part: feature:4681412-4681524:-1:exon
so has part: feature:4680605-4680709:-1:exon
so has part: feature:4680235-4680315:-1:exon
so has part: feature:4680084-4680157:-1:exon
so has part: feature:4679910-4680000:-1:exon
so has part: feature:4676519-4676620:-1:exon
so has part: feature:4675707-4675709:-1:exon
so has part: feature:4675426-4675536:-1:exon
so has part: feature:4671297-4671472:-1:exon
so has part: feature:4669123-4669285:-1:exon
so has part: feature:4667337-4667630:-1:exon
so has part: feature:4666310-4666508:-1:exon
so has part: feature:4662784-4663409:-1:exon
so has part: feature:4660097-4660240:-1:exon
so has part: feature:4659499-4659516:-1:exon
so has part: feature:4659086-4659214:-1:exon
so has part: feature:4657805-4657995:-1:exon
so has part: feature:4656682-4656742:-1:exon
so has part: feature:4655654-4655777:-1:exon
so has part: feature:4652397-4652604:-1:exon
so has part: feature:4649393-4649475:-1:exon
so has part: feature:4644825-4644988:-1:exon

XP_005357994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4719617-4719727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711481-4711544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4705051-4705178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4704508-4704639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4699524-4699653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4696085-4696179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4694976-4695101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4693664-4693858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689555-4689679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4688981-4689117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4687692-4687845:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4685687-4685913:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4683625-4683706:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4682720-4682904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4681412-4681524:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4680605-4680709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4680235-4680315:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4680084-4680157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4679910-4680000:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4676519-4676620:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4675707-4675709:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4675426-4675536:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4671297-4671472:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4669123-4669285:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4667337-4667630:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4666310-4666508:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4662784-4663409:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4660097-4660240:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4659499-4659516:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4659086-4659214:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4657805-4657995:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4656682-4656742:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4655654-4655777:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4652397-4652604:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4649393-4649475:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4644825-4644988:-1:exon

Mon2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mon2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MON2 homolog isoform X5
translation: MNADMSGNAMPALKENSSEVVQPFLMGCGTKEPKITQLCLAAIQRLMSHEVVSETAAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHDEALSKAIVLCFRLHFTKDNITNNTAAATVRQVVTVVFERMVAEDERHSDIEPPVLVQGNSNRRSVSTLKPCAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVIKLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDADKPQWLRAVAVESIHRLCVQPHLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPAAANQAGNNNAGGPVSAPASSGMVGIGGGVTLLPAFEYRGTWIPILTITVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHCLLDLVRGITTMIEGELGEAETECPAVVQEAHSESSEQRDVQSVSDPADKETVSRAVWEEMVSACWCGLLAALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNATTAATLSNKSYSIQGHSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQHLVWILGLKPSGGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEKVCQHPNSRMREWGAEALTSLIKAGLTFNHEPPLTQNQRLQLLLLNPLKEMSSINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVMGAIRNDQGESLIRTAFQCLQLVVTDFLPTMPCSCLQIVVDVAGSFGLHNQELNISLTSIGLLWNISDYFFQRGETIEKELNKEEAAQQKQAEEKGVSLNRPFHPAPPFDCLWLCLYAKLGELCVDPRPAVRKSAGQTLFSTIGAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADKEKIESGGGNILIHHSRDTAEKQWAETWVLTLAGVARIFNTRRYLLQPLGDFSRAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQLVSPVRDSEKPETPPVVNVPVPVLIGNISGPGLNRPFVRTDSIGDKLGRYSAEPPIVTDELEDLNLWWAAWNTWYKIGSESTKPPVTFDKLTFIPSQPFLTALIQIFPALYQHIKAGFNMDDLHKLGVILHSAVSVPISSDASPFILPSYTEAVLTSLQEAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYGQLETKHIANAKYNQIQLFAPAEWVALNYVPFAERSLEVVVDLYQKTACHKAVVNEKVLQNVIKTLRVPLSLKYSCPSESTWKLAVASLLKVLSIGLPVARQHASSGKFDSMWPELASTLEDFLFTKSIPPDNLSIQEFQRNESIDVEVVQLISAEILPYANLIPKAFVGQMMTMLNRGSIHSQSPSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALTVLLKRSQDVLHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENVDGNTWAQVIALYPTLVECITCSSSEVCSALKEALVPFKDFMQPPASKVQNGES
SIO_010081: Mon2
subclass of: SO_0000673
so part of: Mon2
location: complement(join(4644825..4644988,4649393..4649475,4652397..4652604,4655654..4655777,4656682..4656742,4657805..4657995,4659086..4659214,4659499..4659516,4660097..4660240,4662784..4663409,4666310..4666508,4667337..4667630,4669123..4669285,4671297..4671472,4675426..4675536,4675707..4675709,4676519..4676620,4679910..4680000,4680084..4680157,4680235..4680315,4680605..4680709,4681412..4681524,4682720..4682904,4683625..4683706,4685687..4685913,4687692..4687845,4688981..4689117,4689555..4689679,4693664..4693858,4694976..4695101,4696085..4696179,4699524..4699653,4704508..4704639,4705051..4705178,4708701..4708734))
location: region:4644825-4708734:-1
so has part: feature:4708701-4708734:-1:exon
so has part: feature:4705051-4705178:-1:exon
so has part: feature:4704508-4704639:-1:exon
so has part: feature:4699524-4699653:-1:exon
so has part: feature:4696085-4696179:-1:exon
so has part: feature:4694976-4695101:-1:exon
so has part: feature:4693664-4693858:-1:exon
so has part: feature:4689555-4689679:-1:exon
so has part: feature:4688981-4689117:-1:exon
so has part: feature:4687692-4687845:-1:exon
so has part: feature:4685687-4685913:-1:exon
so has part: feature:4683625-4683706:-1:exon
so has part: feature:4682720-4682904:-1:exon
so has part: feature:4681412-4681524:-1:exon
so has part: feature:4680605-4680709:-1:exon
so has part: feature:4680235-4680315:-1:exon
so has part: feature:4680084-4680157:-1:exon
so has part: feature:4679910-4680000:-1:exon
so has part: feature:4676519-4676620:-1:exon
so has part: feature:4675707-4675709:-1:exon
so has part: feature:4675426-4675536:-1:exon
so has part: feature:4671297-4671472:-1:exon
so has part: feature:4669123-4669285:-1:exon
so has part: feature:4667337-4667630:-1:exon
so has part: feature:4666310-4666508:-1:exon
so has part: feature:4662784-4663409:-1:exon
so has part: feature:4660097-4660240:-1:exon
so has part: feature:4659499-4659516:-1:exon
so has part: feature:4659086-4659214:-1:exon
so has part: feature:4657805-4657995:-1:exon
so has part: feature:4656682-4656742:-1:exon
so has part: feature:4655654-4655777:-1:exon
so has part: feature:4652397-4652604:-1:exon
so has part: feature:4649393-4649475:-1:exon
so has part: feature:4644825-4644988:-1:exon

XP_013205741.1
type: Protein
SIO_000068: ncbiprotein

position:4708734:-1
position: 4708734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4708701-4708734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4705051-4705178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4704508-4704639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4699524-4699653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4696085-4696179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4694976-4695101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4693664-4693858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4689555-4689679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4688981-4689117:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4687692-4687845:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4685687-4685913:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4683625-4683706:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4682720-4682904:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4681412-4681524:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4680605-4680709:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4680235-4680315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4680084-4680157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4679910-4680000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4676519-4676620:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4675707-4675709:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4675426-4675536:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4671297-4671472:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4669123-4669285:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4667337-4667630:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4666310-4666508:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4662784-4663409:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4660097-4660240:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4659499-4659516:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4659086-4659214:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4657805-4657995:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4656682-4656742:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4655654-4655777:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4652397-4652604:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4649393-4649475:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4644825-4644988:-1:exon

Usp15
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Usp15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4750236..4848739)
location: region:4750236-4848739:-1
so has part: feature:4750236-4848739:-1:exon
subclass of: SO_0000010

101988552
type: Gene
SIO_000068: ncbigene

position:4750236:-1
position: 4750236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4848739:-1
position: 4848739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750236-4848739:-1:exon

Usp15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Usp15
product: ubiquitin specific peptidase 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005357942.2
SIO_010081: Usp15
subclass of: SO_0000673
so part of: Usp15
location: complement(join(4750236..4750676,4755758..4755846,4758041..4758144,4759050..4759199,4759639..4759754,4760157..4760227,4760614..4760886,4761058..4761173,4762725..4762916,4763009..4763103,4763194..4763277,4765395..4765619,4765754..4765912,4769215..4769388,4790324..4790468,4811914..4811975,4816724..4816869,4820538..4820664,4826677..4826807,4833114..4833241,4848597..4848739))
location: region:4750236-4848739:-1
so has part: feature:4848597-4848739:-1:exon
so has part: feature:4833114-4833241:-1:exon
so has part: feature:4826677-4826807:-1:exon
so has part: feature:4820538-4820664:-1:exon
so has part: feature:4816724-4816869:-1:exon
so has part: feature:4811914-4811975:-1:exon
so has part: feature:4790324-4790468:-1:exon
so has part: feature:4769215-4769388:-1:exon
so has part: feature:4765754-4765912:-1:exon
so has part: feature:4765395-4765619:-1:exon
so has part: feature:4763194-4763277:-1:exon
so has part: feature:4763009-4763103:-1:exon
so has part: feature:4762725-4762916:-1:exon
so has part: feature:4761058-4761173:-1:exon
so has part: feature:4760614-4760886:-1:exon
so has part: feature:4760157-4760227:-1:exon
so has part: feature:4759639-4759754:-1:exon
so has part: feature:4759050-4759199:-1:exon
so has part: feature:4758041-4758144:-1:exon
so has part: feature:4755758-4755846:-1:exon
so has part: feature:4750236-4750676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4848597-4848739:-1:exon

position:4848597:-1
position: 4848597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4833114-4833241:-1:exon

position:4833114:-1
position: 4833114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4833241:-1
position: 4833241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4826677-4826807:-1:exon

position:4826677:-1
position: 4826677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4826807:-1
position: 4826807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4820538-4820664:-1:exon

position:4820538:-1
position: 4820538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4820664:-1
position: 4820664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4816724-4816869:-1:exon

position:4816724:-1
position: 4816724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4816869:-1
position: 4816869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4811914-4811975:-1:exon

position:4811914:-1
position: 4811914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4811975:-1
position: 4811975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4790324-4790468:-1:exon

position:4790324:-1
position: 4790324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4790468:-1
position: 4790468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4769215-4769388:-1:exon

position:4769215:-1
position: 4769215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4769388:-1
position: 4769388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4765754-4765912:-1:exon

position:4765754:-1
position: 4765754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4765912:-1
position: 4765912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4765395-4765619:-1:exon

position:4765395:-1
position: 4765395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4765619:-1
position: 4765619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4763194-4763277:-1:exon

position:4763194:-1
position: 4763194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4763277:-1
position: 4763277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4763009-4763103:-1:exon

position:4763009:-1
position: 4763009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4763103:-1
position: 4763103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4762725-4762916:-1:exon

position:4762725:-1
position: 4762725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4762916:-1
position: 4762916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4761058-4761173:-1:exon

position:4761058:-1
position: 4761058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4761173:-1
position: 4761173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4760614-4760886:-1:exon

position:4760614:-1
position: 4760614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4760886:-1
position: 4760886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4760157-4760227:-1:exon

position:4760157:-1
position: 4760157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4760227:-1
position: 4760227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4759639-4759754:-1:exon

position:4759639:-1
position: 4759639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4759754:-1
position: 4759754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4759050-4759199:-1:exon

position:4759050:-1
position: 4759050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4759199:-1
position: 4759199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4758041-4758144:-1:exon

position:4758041:-1
position: 4758041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4758144:-1
position: 4758144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4755758-4755846:-1:exon

position:4755758:-1
position: 4755758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4755846:-1
position: 4755846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4750236-4750676:-1:exon

position:4750676:-1
position: 4750676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Usp15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Usp15
product: ubiquitin specific peptidase 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005357941.3
SIO_010081: Usp15
subclass of: SO_0000673
so part of: Usp15
location: complement(join(4750236..4750676,4755758..4755846,4758041..4758144,4759050..4759199,4759639..4759754,4760157..4760227,4760614..4760886,4761058..4761173,4762725..4762916,4763009..4763103,4763194..4763277,4765395..4765619,4765754..4765912,4769215..4769388,4790324..4790468,4797272..4797358,4811914..4811975,4816724..4816869,4820538..4820664,4826677..4826807,4833114..4833241,4848597..4848739))
location: region:4750236-4848739:-1
so has part: feature:4848597-4848739:-1:exon
so has part: feature:4833114-4833241:-1:exon
so has part: feature:4826677-4826807:-1:exon
so has part: feature:4820538-4820664:-1:exon
so has part: feature:4816724-4816869:-1:exon
so has part: feature:4811914-4811975:-1:exon
so has part: feature:4797272-4797358:-1:exon
so has part: feature:4790324-4790468:-1:exon
so has part: feature:4769215-4769388:-1:exon
so has part: feature:4765754-4765912:-1:exon
so has part: feature:4765395-4765619:-1:exon
so has part: feature:4763194-4763277:-1:exon
so has part: feature:4763009-4763103:-1:exon
so has part: feature:4762725-4762916:-1:exon
so has part: feature:4761058-4761173:-1:exon
so has part: feature:4760614-4760886:-1:exon
so has part: feature:4760157-4760227:-1:exon
so has part: feature:4759639-4759754:-1:exon
so has part: feature:4759050-4759199:-1:exon
so has part: feature:4758041-4758144:-1:exon
so has part: feature:4755758-4755846:-1:exon
so has part: feature:4750236-4750676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4848597-4848739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4833114-4833241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4826677-4826807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4820538-4820664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4816724-4816869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4811914-4811975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4797272-4797358:-1:exon

position:4797272:-1
position: 4797272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4797358:-1
position: 4797358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4790324-4790468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4769215-4769388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4765754-4765912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4765395-4765619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4763194-4763277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4763009-4763103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4762725-4762916:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4761058-4761173:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760614-4760886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4760157-4760227:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4759639-4759754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4759050-4759199:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4758041-4758144:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4755758-4755846:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4750236-4750676:-1:exon

Usp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Usp15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 15 isoform X2
translation: MAEGGAADLDTQRSDIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNVYPGPIDNSGLLKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKYMSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRGPSAPNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLTKPMQYKVIVPKIGNILDLCTALSALSGVPADKMIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDGPLRCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENDNSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFINLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEYKPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQDTFSGTGFFPLDRETKGASAATGIPLESDEDSNDNDNDIENENCMHTN
SIO_010081: Usp15
subclass of: SO_0000673
so part of: Usp15
location: complement(join(4750494..4750676,4755758..4755846,4758041..4758144,4759050..4759199,4759639..4759754,4760157..4760227,4760614..4760886,4761058..4761173,4762725..4762916,4763009..4763103,4763194..4763277,4765395..4765619,4765754..4765912,4769215..4769388,4790324..4790468,4811914..4811975,4816724..4816869,4820538..4820664,4826677..4826807,4833114..4833241,4848597..4848685))
location: region:4750494-4848685:-1
so has part: feature:4848597-4848685:-1:exon
so has part: feature:4833114-4833241:-1:exon
so has part: feature:4826677-4826807:-1:exon
so has part: feature:4820538-4820664:-1:exon
so has part: feature:4816724-4816869:-1:exon
so has part: feature:4811914-4811975:-1:exon
so has part: feature:4790324-4790468:-1:exon
so has part: feature:4769215-4769388:-1:exon
so has part: feature:4765754-4765912:-1:exon
so has part: feature:4765395-4765619:-1:exon
so has part: feature:4763194-4763277:-1:exon
so has part: feature:4763009-4763103:-1:exon
so has part: feature:4762725-4762916:-1:exon
so has part: feature:4761058-4761173:-1:exon
so has part: feature:4760614-4760886:-1:exon
so has part: feature:4760157-4760227:-1:exon
so has part: feature:4759639-4759754:-1:exon
so has part: feature:4759050-4759199:-1:exon
so has part: feature:4758041-4758144:-1:exon
so has part: feature:4755758-4755846:-1:exon
so has part: feature:4750494-4750676:-1:exon

XP_005357999.1
type: Protein
SIO_000068: ncbiprotein

position:4750494:-1
position: 4750494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4848685:-1
position: 4848685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4848597-4848685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4833114-4833241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4826677-4826807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4820538-4820664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4816724-4816869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4811914-4811975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4790324-4790468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4769215-4769388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4765754-4765912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4765395-4765619:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4763194-4763277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4763009-4763103:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4762725-4762916:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4761058-4761173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4760614-4760886:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760157-4760227:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4759639-4759754:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4759050-4759199:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4758041-4758144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4755758-4755846:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4750494-4750676:-1:exon

Usp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Usp15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 15 isoform X1
translation: MAEGGAADLDTQRSDIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNVYPGPIDNSGLLKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKYMSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRGPSAPKSPGASNFSALPKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLTKPMQYKVIVPKIGNILDLCTALSALSGVPADKMIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDGPLRCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENDNSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFINLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEYKPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQDTFSGTGFFPLDRETKGASAATGIPLESDEDSNDNDNDIENENCMHTN
SIO_010081: Usp15
subclass of: SO_0000673
so part of: Usp15
location: complement(join(4750494..4750676,4755758..4755846,4758041..4758144,4759050..4759199,4759639..4759754,4760157..4760227,4760614..4760886,4761058..4761173,4762725..4762916,4763009..4763103,4763194..4763277,4765395..4765619,4765754..4765912,4769215..4769388,4790324..4790468,4797272..4797358,4811914..4811975,4816724..4816869,4820538..4820664,4826677..4826807,4833114..4833241,4848597..4848685))
location: region:4750494-4848685:-1
so has part: feature:4848597-4848685:-1:exon
so has part: feature:4833114-4833241:-1:exon
so has part: feature:4826677-4826807:-1:exon
so has part: feature:4820538-4820664:-1:exon
so has part: feature:4816724-4816869:-1:exon
so has part: feature:4811914-4811975:-1:exon
so has part: feature:4797272-4797358:-1:exon
so has part: feature:4790324-4790468:-1:exon
so has part: feature:4769215-4769388:-1:exon
so has part: feature:4765754-4765912:-1:exon
so has part: feature:4765395-4765619:-1:exon
so has part: feature:4763194-4763277:-1:exon
so has part: feature:4763009-4763103:-1:exon
so has part: feature:4762725-4762916:-1:exon
so has part: feature:4761058-4761173:-1:exon
so has part: feature:4760614-4760886:-1:exon
so has part: feature:4760157-4760227:-1:exon
so has part: feature:4759639-4759754:-1:exon
so has part: feature:4759050-4759199:-1:exon
so has part: feature:4758041-4758144:-1:exon
so has part: feature:4755758-4755846:-1:exon
so has part: feature:4750494-4750676:-1:exon

XP_005357998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4848597-4848685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4833114-4833241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4826677-4826807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4820538-4820664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4816724-4816869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4811914-4811975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4797272-4797358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4790324-4790468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4769215-4769388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4765754-4765912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4765395-4765619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4763194-4763277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4763009-4763103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4762725-4762916:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4761058-4761173:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760614-4760886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4760157-4760227:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4759639-4759754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4759050-4759199:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4758041-4758144:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4755758-4755846:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4750494-4750676:-1:exon

Fam19a2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fam19a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4905278..5366981
location: region:4905278-5366981:1
so has part: feature:4905278-5366981:1:exon
subclass of: SO_0000010

101989009
type: Gene
SIO_000068: ncbigene

position:4905278:1
position: 4905278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5366981:1
position: 5366981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4905278-5366981:1:exon

Fam19a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fam19a2
product: family with sequence similarity 19 member A2, C-C motif chemokine like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026784566.1
SIO_010081: Fam19a2
subclass of: SO_0000673
so part of: Fam19a2
location: join(4905278..4906369,5216963..5217069,5315593..5315745,5316723..5316847,5366938..5366981)
location: region:4905278-5366981:1
so has part: feature:4905278-4906369:1:exon
so has part: feature:5216963-5217069:1:exon
so has part: feature:5315593-5315745:1:exon
so has part: feature:5316723-5316847:1:exon
so has part: feature:5366938-5366981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4905278-4906369:1:exon

position:4906369:1
position: 4906369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5216963-5217069:1:exon

position:5216963:1
position: 5216963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5217069:1
position: 5217069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5315593-5315745:1:exon

position:5315593:1
position: 5315593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5315745:1
position: 5315745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5316723-5316847:1:exon

position:5316723:1
position: 5316723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5316847:1
position: 5316847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5366938-5366981:1:exon

position:5366938:1
position: 5366938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fam19a2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Fam19a2
product: family with sequence similarity 19 member A2, C-C motif chemokine like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003377962.1
SIO_010081: Fam19a2
so part of: Fam19a2
location: join(4905278..4906369,5216963..5217069,5315593..5315745,5316723..5316847,5340070..5340311,5350028..5352793)
location: region:4905278-5352793:1
so has part: feature:4905278-4906369:1:exon
so has part: feature:5216963-5217069:1:exon
so has part: feature:5315593-5315745:1:exon
so has part: feature:5316723-5316847:1:exon
so has part: feature:5340070-5340311:1:exon
so has part: feature:5350028-5352793:1:exon

position:5352793:1
position: 5352793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4905278-4906369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5216963-5217069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5315593-5315745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5316723-5316847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5340070-5340311:1:exon

position:5340070:1
position: 5340070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5340311:1
position: 5340311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5350028-5352793:1:exon

position:5350028:1
position: 5350028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fam19a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fam19a2
product: family with sequence similarity 19 member A2, C-C motif chemokine like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_026784567.1
SIO_010081: Fam19a2
subclass of: SO_0000673
so part of: Fam19a2
location: join(4905278..4906369,5216963..5217069,5315593..5315745,5316723..5316847,5350028..5352793)
location: region:4905278-5352793:1
so has part: feature:4905278-4906369:1:exon
so has part: feature:5216963-5217069:1:exon
so has part: feature:5315593-5315745:1:exon
so has part: feature:5316723-5316847:1:exon
so has part: feature:5350028-5352793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4905278-4906369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5216963-5217069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5315593-5315745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5316723-5316847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5350028-5352793:1:exon

Fam19a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fam19a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM19A2 isoform X1
translation: MSKRDLQKATKGKLLMIIFIVTLLGKAVSSANHHKAHHVKTGTCEVVALHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVEQKWWCHMQPCLEGEECKVLPDRKGWSCSSGNKVKTTREEGGIWIPA
SIO_010081: Fam19a2
subclass of: SO_0000673
so part of: Fam19a2
location: join(5216964..5217069,5315593..5315745,5316723..5316847,5366938..5366967)
location: region:5216964-5366967:1
so has part: feature:5216964-5217069:1:exon
so has part: feature:5315593-5315745:1:exon
so has part: feature:5316723-5316847:1:exon
so has part: feature:5366938-5366967:1:exon

XP_026640367.1
type: Protein
SIO_000068: ncbiprotein

position:5216964:1
position: 5216964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5366967:1
position: 5366967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5216964-5217069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5315593-5315745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5316723-5316847:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5366938-5366967:1:exon

Fam19a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fam19a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM19A2 isoform X2
translation: MSKRDLQKATKGKLLMIIFIVTLLGKAVSSANHHKAHHVKTGTCEVVALHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVEQKWWCHMQPCLEGEECKVLPDRKGWSCSSGNKVKTTRVTH
SIO_010081: Fam19a2
subclass of: SO_0000673
so part of: Fam19a2
location: join(5216964..5217069,5315593..5315745,5316723..5316847,5350028..5350039)
location: region:5216964-5350039:1
so has part: feature:5216964-5217069:1:exon
so has part: feature:5315593-5315745:1:exon
so has part: feature:5316723-5316847:1:exon
so has part: feature:5350028-5350039:1:exon

XP_026640368.1
type: Protein
SIO_000068: ncbiprotein

position:5350039:1
position: 5350039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5216964-5217069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5315593-5315745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5316723-5316847:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5350028-5350039:1:exon

LOC106144058
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5573910..5576039
location: region:5573910-5576039:1
so has part: feature:5573910-5576039:1:exon
subclass of: SO_0000011

106144058
type: Gene
SIO_000068: ncbigene

position:5573910:1
position: 5573910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5576039:1
position: 5576039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5573910-5576039:1:exon

LOC106144058
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC106144058
product: uncharacterized LOC106144058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001229164.1
SIO_010081: LOC106144058
subclass of: SO_0000673
so part of: LOC106144058
location: join(5573910..5574145,5575040..5575186,5575483..5576039)
location: region:5573910-5576039:1
so has part: feature:5573910-5574145:1:exon
so has part: feature:5575040-5575186:1:exon
so has part: feature:5575483-5576039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5573910-5574145:1:exon

position:5574145:1
position: 5574145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5575040-5575186:1:exon

position:5575040:1
position: 5575040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5575186:1
position: 5575186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5575483-5576039:1:exon

position:5575483:1
position: 5575483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101989683
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101989683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5653488..5654531)
location: region:5653488-5654531:-1
so has part: feature:5653488-5654531:-1:exon

101989683
type: Gene
SIO_000068: ncbigene

position:5653488:-1
position: 5653488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5654531:-1
position: 5654531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5653488-5654531:-1:exon

LOC101989683
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101989683
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 144 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101989683
subclass of: SO_0000673
so part of: LOC101989683
location: complement(5653488..5654531)
location: region:5653488-5654531:-1
so has part: feature:5653488-5654531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5653488-5654531:-1:exon

LOC113457384
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457384
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6193088..6193195
location: region:6193088-6193195:1
so has part: feature:6193088-6193195:1:exon
subclass of: SO_0000623

113457384
type: Gene
SIO_000068: ncbigene

position:6193088:1
position: 6193088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6193195:1
position: 6193195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6193088-6193195:1:exon

LOC113457384
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457384
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377972.1
SIO_010081: LOC113457384
subclass of: SO_0000673
so part of: LOC113457384
location: 6193088..6193195
location: region:6193088-6193195:1
so has part: feature:6193088-6193195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6193088-6193195:1:exon

LOC101984765
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6278767..6280975
location: region:6278767-6280975:1
so has part: feature:6278767-6280975:1:exon

101984765
type: Gene
SIO_000068: ncbigene

position:6278767:1
position: 6278767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6280975:1
position: 6280975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6278767-6280975:1:exon

LOC101984765
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984765
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC101984765
subclass of: SO_0000673
so part of: LOC101984765
location: 6278767..6278790
location: region:6278767-6278790:1
so has part: feature:6278767-6278790:1:exon

position:6278790:1
position: 6278790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6278767-6278790:1:exon

LOC101984765
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984765
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC101984765
subclass of: SO_0000673
so part of: LOC101984765
location: 6279842..6280975
location: region:6279842-6280975:1
so has part: feature:6279842-6280975:1:exon

position:6279842:1
position: 6279842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6279842-6280975:1:exon

Slc16a7
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc16a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6807484..6955473)
location: region:6807484-6955473:-1
so has part: feature:6807484-6955473:-1:exon
subclass of: SO_0000010

101989971
type: Gene
SIO_000068: ncbigene

position:6807484:-1
position: 6807484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6955473:-1
position: 6955473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6807484-6955473:-1:exon

Slc16a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc16a7
product: solute carrier family 16 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357944.3
SIO_010081: Slc16a7
subclass of: SO_0000673
so part of: Slc16a7
location: complement(join(6807484..6808179,6810956..6811768,6813218..6813361,6859164..6859413,6864973..6865086,6904675..6904767,6949995..6950069,6955264..6955473))
location: region:6807484-6955473:-1
so has part: feature:6955264-6955473:-1:exon
so has part: feature:6949995-6950069:-1:exon
so has part: feature:6904675-6904767:-1:exon
so has part: feature:6864973-6865086:-1:exon
so has part: feature:6859164-6859413:-1:exon
so has part: feature:6813218-6813361:-1:exon
so has part: feature:6810956-6811768:-1:exon
so has part: feature:6807484-6808179:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6955264-6955473:-1:exon

position:6955264:-1
position: 6955264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6949995-6950069:-1:exon

position:6949995:-1
position: 6949995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6950069:-1
position: 6950069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6904675-6904767:-1:exon

position:6904675:-1
position: 6904675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6904767:-1
position: 6904767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6864973-6865086:-1:exon

position:6864973:-1
position: 6864973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6865086:-1
position: 6865086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6859164-6859413:-1:exon

position:6859164:-1
position: 6859164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6859413:-1
position: 6859413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6813218-6813361:-1:exon

position:6813218:-1
position: 6813218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6813361:-1
position: 6813361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6810956-6811768:-1:exon

position:6810956:-1
position: 6810956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6811768:-1
position: 6811768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6807484-6808179:-1:exon

position:6808179:-1
position: 6808179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc16a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc16a7
product: solute carrier family 16 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013350296.2
SIO_010081: Slc16a7
subclass of: SO_0000673
so part of: Slc16a7
location: complement(join(6807484..6808179,6810956..6811768,6813218..6813361,6859164..6859413,6864973..6865086,6893412..6893753))
location: region:6807484-6893753:-1
so has part: feature:6893412-6893753:-1:exon
so has part: feature:6864973-6865086:-1:exon
so has part: feature:6859164-6859413:-1:exon
so has part: feature:6813218-6813361:-1:exon
so has part: feature:6810956-6811768:-1:exon
so has part: feature:6807484-6808179:-1:exon

position:6893753:-1
position: 6893753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6893412-6893753:-1:exon

position:6893412:-1
position: 6893412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6864973-6865086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6859164-6859413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6813218-6813361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6810956-6811768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6807484-6808179:-1:exon

Slc16a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc16a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 2
translation: MPSETSAPPPYPLPPDGGWGWVVVCASFISIGFSYAFPKAVTVFFKDIQEIFHASYSEIAWISSIMLAVMYAGGPVSSVLVNNYGSRPVVITGGLLCCTGMILASFSNSVIQLYLTIGLIGGIGLAFNLQPALTILGKYFYRRRPMASGLAMAGSPVFLSSLAPFNQYLFNSYGWKGSFLILGGIFLHSCVAGCLMRPVQQSTRQSKSKSKVGSRHDETMKKVSKESTAEKINKFLDFSLFKHRGFLIYLSGNVIMFLGFFAPIIFLAPYAKDKGVDEYNSALLLSVMAFVDMFARPCGGLIANSKLVRPRIQYFFSFAVIFTGVCHLLCPLADTYAALVAYSIVFGFGFGSVSSVLFETLMDLVGPARFSSAVGLVTIMECCPVLLGPPLAGKLVDKTKDYKFMYIASGAIVVISGIWLFIGNAINYRLLAKERKRERARRKKSATHSPRESEALNKSKQDDVTVKVSGAHSPPSDRERESNI
SIO_010081: Slc16a7
subclass of: SO_0000673
so part of: Slc16a7
location: complement(join(6807902..6808179,6810956..6811768,6813218..6813361,6859164..6859383))
location: region:6807902-6859383:-1
so has part: feature:6859164-6859383:-1:exon
so has part: feature:6813218-6813361:-1:exon
so has part: feature:6810956-6811768:-1:exon
so has part: feature:6807902-6808179:-1:exon

XP_005358001.1
type: Protein
SIO_000068: ncbiprotein

position:6807902:-1
position: 6807902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6859383:-1
position: 6859383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6859164-6859383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6813218-6813361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6810956-6811768:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6807902-6808179:-1:exon

Slc16a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc16a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 2
translation: MPSETSAPPPYPLPPDGGWGWVVVCASFISIGFSYAFPKAVTVFFKDIQEIFHASYSEIAWISSIMLAVMYAGGPVSSVLVNNYGSRPVVITGGLLCCTGMILASFSNSVIQLYLTIGLIGGIGLAFNLQPALTILGKYFYRRRPMASGLAMAGSPVFLSSLAPFNQYLFNSYGWKGSFLILGGIFLHSCVAGCLMRPVQQSTRQSKSKSKVGSRHDETMKKVSKESTAEKINKFLDFSLFKHRGFLIYLSGNVIMFLGFFAPIIFLAPYAKDKGVDEYNSALLLSVMAFVDMFARPCGGLIANSKLVRPRIQYFFSFAVIFTGVCHLLCPLADTYAALVAYSIVFGFGFGSVSSVLFETLMDLVGPARFSSAVGLVTIMECCPVLLGPPLAGKLVDKTKDYKFMYIASGAIVVISGIWLFIGNAINYRLLAKERKRERARRKKSATHSPRESEALNKSKQDDVTVKVSGAHSPPSDRERESNI
SIO_010081: Slc16a7
subclass of: SO_0000673
so part of: Slc16a7
location: complement(join(6807902..6808179,6810956..6811768,6813218..6813361,6859164..6859383))
location: region:6807902-6859383:-1
so has part: feature:6859164-6859383:-1:exon
so has part: feature:6813218-6813361:-1:exon
so has part: feature:6810956-6811768:-1:exon
so has part: feature:6807902-6808179:-1:exon

XP_013205750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6859164-6859383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6813218-6813361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6810956-6811768:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6807902-6808179:-1:exon

LOC101990258
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101990258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7261816..7274405)
location: region:7261816-7274405:-1
so has part: feature:7261816-7274405:-1:exon
subclass of: SO_0000011

101990258
type: Gene
SIO_000068: ncbigene

position:7261816:-1
position: 7261816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7274405:-1
position: 7274405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7261816-7274405:-1:exon

LOC101990258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101990258
product: uncharacterized LOC101990258
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001229165.1
SIO_010081: LOC101990258
subclass of: SO_0000673
so part of: LOC101990258
location: complement(join(7261816..7262137,7266565..7266679,7274140..7274405))
location: region:7261816-7274405:-1
so has part: feature:7274140-7274405:-1:exon
so has part: feature:7266565-7266679:-1:exon
so has part: feature:7261816-7262137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7274140-7274405:-1:exon

position:7274140:-1
position: 7274140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7266565-7266679:-1:exon

position:7266565:-1
position: 7266565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7266679:-1
position: 7266679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7261816-7262137:-1:exon

position:7262137:-1
position: 7262137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106144057
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7403533..7423496)
location: region:7403533-7423496:-1
so has part: feature:7403533-7423496:-1:exon

106144057
type: Gene
SIO_000068: ncbigene

position:7403533:-1
position: 7403533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7423496:-1
position: 7423496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7403533-7423496:-1:exon

LOC106144057
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
pseudo: true
SIO_010081: LOC106144057
subclass of: SO_0000673
so part of: LOC106144057
location: complement(7403533..7404013)
location: region:7403533-7404013:-1
so has part: feature:7403533-7404013:-1:exon

position:7404013:-1
position: 7404013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7403533-7404013:-1:exon

LOC106144057
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
pseudo: true
SIO_010081: LOC106144057
subclass of: SO_0000673
so part of: LOC106144057
location: complement(7418395..7418575)
location: region:7418395-7418575:-1
so has part: feature:7418395-7418575:-1:exon

position:7418395:-1
position: 7418395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7418575:-1
position: 7418575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7418395-7418575:-1:exon

LOC106144057
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
pseudo: true
SIO_010081: LOC106144057
subclass of: SO_0000673
so part of: LOC106144057
location: complement(7423391..7423496)
location: region:7423391-7423496:-1
so has part: feature:7423391-7423496:-1:exon

position:7423391:-1
position: 7423391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7423391-7423496:-1:exon

Lrig3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lrig3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7497836..7546994
location: region:7497836-7546994:1
so has part: feature:7497836-7546994:1:exon
subclass of: SO_0000010

101990440
type: Gene
SIO_000068: ncbigene

position:7497836:1
position: 7497836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7546994:1
position: 7546994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7497836-7546994:1:exon

Lrig3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrig3
product: leucine rich repeats and immunoglobulin like domains 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357945.2
SIO_010081: Lrig3
subclass of: SO_0000673
so part of: Lrig3
location: join(7497836..7498312,7504001..7504072,7504294..7504368,7527370..7527501,7528317..7528460,7529456..7529599,7529920..7530063,7530458..7530601,7531501..7531581,7532690..7532761,7534976..7535047,7535526..7535689,7538808..7539128,7540386..7540667,7541702..7542154,7542824..7542979,7544030..7544173,7544492..7544761,7545917..7546994)
location: region:7497836-7546994:1
so has part: feature:7497836-7498312:1:exon
so has part: feature:7504001-7504072:1:exon
so has part: feature:7504294-7504368:1:exon
so has part: feature:7527370-7527501:1:exon
so has part: feature:7528317-7528460:1:exon
so has part: feature:7529456-7529599:1:exon
so has part: feature:7529920-7530063:1:exon
so has part: feature:7530458-7530601:1:exon
so has part: feature:7531501-7531581:1:exon
so has part: feature:7532690-7532761:1:exon
so has part: feature:7534976-7535047:1:exon
so has part: feature:7535526-7535689:1:exon
so has part: feature:7538808-7539128:1:exon
so has part: feature:7540386-7540667:1:exon
so has part: feature:7541702-7542154:1:exon
so has part: feature:7542824-7542979:1:exon
so has part: feature:7544030-7544173:1:exon
so has part: feature:7544492-7544761:1:exon
so has part: feature:7545917-7546994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7497836-7498312:1:exon

position:7498312:1
position: 7498312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7504001-7504072:1:exon

position:7504001:1
position: 7504001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7504072:1
position: 7504072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7504294-7504368:1:exon

position:7504294:1
position: 7504294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7504368:1
position: 7504368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7527370-7527501:1:exon

position:7527370:1
position: 7527370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7527501:1
position: 7527501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7528317-7528460:1:exon

position:7528317:1
position: 7528317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7528460:1
position: 7528460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7529456-7529599:1:exon

position:7529456:1
position: 7529456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7529599:1
position: 7529599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7529920-7530063:1:exon

position:7529920:1
position: 7529920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7530063:1
position: 7530063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7530458-7530601:1:exon

position:7530458:1
position: 7530458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7530601:1
position: 7530601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7531501-7531581:1:exon

position:7531501:1
position: 7531501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7531581:1
position: 7531581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7532690-7532761:1:exon

position:7532690:1
position: 7532690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7532761:1
position: 7532761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7534976-7535047:1:exon

position:7534976:1
position: 7534976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7535047:1
position: 7535047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7535526-7535689:1:exon

position:7535526:1
position: 7535526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7535689:1
position: 7535689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7538808-7539128:1:exon

position:7538808:1
position: 7538808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7539128:1
position: 7539128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7540386-7540667:1:exon

position:7540386:1
position: 7540386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7540667:1
position: 7540667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7541702-7542154:1:exon

position:7541702:1
position: 7541702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7542154:1
position: 7542154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7542824-7542979:1:exon

position:7542824:1
position: 7542824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7542979:1
position: 7542979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7544030-7544173:1:exon

position:7544030:1
position: 7544030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7544173:1
position: 7544173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7544492-7544761:1:exon

position:7544492:1
position: 7544492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7544761:1
position: 7544761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7545917-7546994:1:exon

position:7545917:1
position: 7545917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lrig3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrig3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeats and immunoglobulin-like domains protein 3
translation: MGAPRLRAAAAALGLLLCAGLGRAGPAESGGHGEPGRSSEDAAGRPCPAVCHCLGDLLDCSRRRLVRLPDPLPAWVVRLDLSHNRLSSIQTSSLSHLQNLREVKLNNNELETIPSLGPVSANIKQLSLAGNSIDEILPEQLEPFQALETLDLSNNNISELRAAFPPLQLKYLYINSNRVISMEPGYFDNLASTLLVLKLNRNRITAIPPKMFKLPQLHHLELSRNKIKNVEGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLTLRELHLSQNAISRISADAWEFCQKLSELDLTSNHLSRLEDSSFLGLSLLNTLHIGNNKVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRQLMLQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQLKWLPPWVVENNFQSFINASCAHPQLLKGRSIFTVSPDGFVCDDFPKPQITVQPETQSAIKGSNVSFTCSAASSSDSPMTFAWKKDNELLQDAEMENYAHLRAQGGEVMEYTTILRLHSVAFASEGKYQCIISNHFGSSYSVKAKLTVNMLPSFTKTPMDLTIRAGAMARLECAAVGHPAPQIAWQKDGGTDFPAARERRMHVMPEDEVFFIVDVKIEDIGVYSCTAQNSAGSVSANATLTVLETPSFLRPLSDRTVTKGETAVLQCIAGGSPPPRLNWTKDDSPLLVTERHFFAAGNQLLIIVDSDVSDAGKYTCEMSNTLGTERGNMRLSVIPSPTCDSPHMTAPSLDDDGWATVGVVIIAVVCCVVGTSLVWVVIIYHTRRRNEDCSITNTDETNLPADIPSYLSSQGTLADRQDGYISSESGSHHQFLTSSGGFFLPQHDSAGTCHIDNSSEAEVDAAPDPFLCPFVGSAGPVYLKGNVYGQDPFEVYLPGCSSDPRVALMDHYETSYMKKDCFPCTHPSEEPCERNLSSIPWPHSRKPVTFMYTQNEGPTLQPLCLNKSSLDFSTSQEPGSVTSSNSFMGTFGKPLRRPHLDAFSSFGKPPDCQPRPFHLTELSSAELDSESEEDAKERTEFREDNHRGTNQQTLDTYRTPDCQPCDLGT
SIO_010081: Lrig3
subclass of: SO_0000673
so part of: Lrig3
location: join(7498077..7498312,7504001..7504072,7504294..7504368,7527370..7527501,7528317..7528460,7529456..7529599,7529920..7530063,7530458..7530601,7531501..7531581,7532690..7532761,7534976..7535047,7535526..7535689,7538808..7539128,7540386..7540667,7541702..7542154,7542824..7542979,7544030..7544173,7544492..7544761,7545917..7546161)
location: region:7498077-7546161:1
so has part: feature:7498077-7498312:1:exon
so has part: feature:7504001-7504072:1:exon
so has part: feature:7504294-7504368:1:exon
so has part: feature:7527370-7527501:1:exon
so has part: feature:7528317-7528460:1:exon
so has part: feature:7529456-7529599:1:exon
so has part: feature:7529920-7530063:1:exon
so has part: feature:7530458-7530601:1:exon
so has part: feature:7531501-7531581:1:exon
so has part: feature:7532690-7532761:1:exon
so has part: feature:7534976-7535047:1:exon
so has part: feature:7535526-7535689:1:exon
so has part: feature:7538808-7539128:1:exon
so has part: feature:7540386-7540667:1:exon
so has part: feature:7541702-7542154:1:exon
so has part: feature:7542824-7542979:1:exon
so has part: feature:7544030-7544173:1:exon
so has part: feature:7544492-7544761:1:exon
so has part: feature:7545917-7546161:1:exon

XP_005358002.1
type: Protein
SIO_000068: ncbiprotein

position:7498077:1
position: 7498077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7546161:1
position: 7546161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7498077-7498312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7504001-7504072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7504294-7504368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7527370-7527501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7528317-7528460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7529456-7529599:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7529920-7530063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7530458-7530601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7531501-7531581:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7532690-7532761:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7534976-7535047:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7535526-7535689:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7538808-7539128:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7540386-7540667:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7541702-7542154:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7542824-7542979:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7544030-7544173:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7544492-7544761:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7545917-7546161:1:exon

Atp23
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Atp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8324667..8342629)
location: region:8324667-8342629:-1
so has part: feature:8324667-8342629:-1:exon
subclass of: SO_0000010

101990728
type: Gene
SIO_000068: ncbigene

position:8324667:-1
position: 8324667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8342629:-1
position: 8342629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8324667-8342629:-1:exon

Atp23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atp23
product: ATP23 metallopeptidase and ATP synthase assembly factor homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026784569.1
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324667..8325102,8330628..8330711,8332613..8332750,8337458..8337539,8337916..8337961,8342561..8342629))
location: region:8324667-8342629:-1
so has part: feature:8342561-8342629:-1:exon
so has part: feature:8337916-8337961:-1:exon
so has part: feature:8337458-8337539:-1:exon
so has part: feature:8332613-8332750:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324667-8325102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8342561-8342629:-1:exon

position:8342561:-1
position: 8342561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8337916-8337961:-1:exon

position:8337916:-1
position: 8337916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8337961:-1
position: 8337961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8337458-8337539:-1:exon

position:8337458:-1
position: 8337458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8337539:-1
position: 8337539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8332613-8332750:-1:exon

position:8332613:-1
position: 8332613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8332750:-1
position: 8332750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8330628-8330711:-1:exon

position:8330628:-1
position: 8330628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8330711:-1
position: 8330711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8324667-8325102:-1:exon

position:8325102:-1
position: 8325102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atp23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atp23
product: ATP23 metallopeptidase and ATP synthase assembly factor homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026784572.1
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324667..8325102,8330628..8330711,8332613..8332750,8337458..8337539,8337920..8337961,8342561..8342624))
location: region:8324667-8342624:-1
so has part: feature:8342561-8342624:-1:exon
so has part: feature:8337920-8337961:-1:exon
so has part: feature:8337458-8337539:-1:exon
so has part: feature:8332613-8332750:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324667-8325102:-1:exon

position:8342624:-1
position: 8342624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8342561-8342624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8337920-8337961:-1:exon

position:8337920:-1
position: 8337920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8337458-8337539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8332613-8332750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8324667-8325102:-1:exon

Atp23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atp23
product: ATP23 metallopeptidase and ATP synthase assembly factor homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005357946.3
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324667..8325102,8330628..8330711,8332613..8332750,8337458..8337539,8337916..8337961,8339446..8339654))
location: region:8324667-8339654:-1
so has part: feature:8339446-8339654:-1:exon
so has part: feature:8337916-8337961:-1:exon
so has part: feature:8337458-8337539:-1:exon
so has part: feature:8332613-8332750:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324667-8325102:-1:exon

position:8339654:-1
position: 8339654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8339446-8339654:-1:exon

position:8339446:-1
position: 8339446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8337916-8337961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8337458-8337539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8332613-8332750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8324667-8325102:-1:exon

Atp23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atp23
product: ATP23 metallopeptidase and ATP synthase assembly factor homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_026784571.1
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324667..8325102,8330628..8330711,8332613..8332750,8337458..8337539,8337920..8337961,8339446..8339479))
location: region:8324667-8339479:-1
so has part: feature:8339446-8339479:-1:exon
so has part: feature:8337920-8337961:-1:exon
so has part: feature:8337458-8337539:-1:exon
so has part: feature:8332613-8332750:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324667-8325102:-1:exon

position:8339479:-1
position: 8339479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8339446-8339479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8337920-8337961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8337458-8337539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8332613-8332750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8324667-8325102:-1:exon

Atp23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atp23
product: ATP23 metallopeptidase and ATP synthase assembly factor homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_026784570.1
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324667..8325102,8330628..8330711,8332613..8332750,8337458..8337659,8337916..8337961))
location: region:8324667-8337961:-1
so has part: feature:8337916-8337961:-1:exon
so has part: feature:8337458-8337659:-1:exon
so has part: feature:8332613-8332750:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324667-8325102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8337916-8337961:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8337458-8337659:-1:exon

position:8337659:-1
position: 8337659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8332613-8332750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8324667-8325102:-1:exon

Atp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protease ATP23 homolog isoform X1
translation: MAGAPGGGGPGPAAGEPLLQRRDSGQGSPQPPAHGKPQEAFLSGFFTQDQSCPLMLQKTLETNPYVKVLLDAMKHSGCPVNKGRHFSCEDCDGNVSGGFDASASQIVLCQNNIRNQAHMSRVVTHELIHAFDHCRAHVHWFSDVRHLACSEIRAASLSGDCSLLNEIFRLRFGLRRHHQICVRDRAALSIVAVRNISREEAQKAVDDVFESCFNDREPFGRIPHTKMYARYAHRDFQNRDRYYSNI
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324899..8325102,8330628..8330711,8332613..8332750,8337458..8337539,8337916..8337961,8339446..8339632))
location: region:8324899-8339632:-1
so has part: feature:8339446-8339632:-1:exon
so has part: feature:8337916-8337961:-1:exon
so has part: feature:8337458-8337539:-1:exon
so has part: feature:8332613-8332750:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324899-8325102:-1:exon

XP_005358003.1
type: Protein
SIO_000068: ncbiprotein

position:8324899:-1
position: 8324899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8339632:-1
position: 8339632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8339446-8339632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8337916-8337961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8337458-8337539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8332613-8332750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8324899-8325102:-1:exon

Atp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protease ATP23 homolog isoform X2
translation: MKHSGCPVNKGRHFSCEDCDGNVSGGFDASASQIVLCQNNIRNQAHMSRVVTHELIHAFDHCRAHVHWFSDVRHLACSEIRAASLSGDCSLLNEIFRLRFGLRRHHQICVRDRAALSIVAVRNISREEAQKAVDDVFESCFNDREPFGRIPHTKMYARYAHRDFQNRDRYYSNI
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324899..8325102,8330628..8330711,8332613..8332750,8337458..8337539,8337916..8337932))
location: region:8324899-8337932:-1
so has part: feature:8337916-8337932:-1:exon
so has part: feature:8337458-8337539:-1:exon
so has part: feature:8332613-8332750:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324899-8325102:-1:exon

XP_026640370.1
type: Protein
SIO_000068: ncbiprotein

position:8337932:-1
position: 8337932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8337916-8337932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8337458-8337539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8332613-8332750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8324899-8325102:-1:exon

Atp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protease ATP23 homolog isoform X3
translation: MSRVVTHELIHAFDHCRAHVHWFSDVRHLACSEIRAASLSGDCSLLNEIFRLRFGLRRHHQICVRDRAALSIVAVRNISREEAQKAVDDVFESCFNDREPFGRIPHTKMYARYAHRDFQNRDRYYSNI
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324899..8325102,8330628..8330711,8332613..8332711))
location: region:8324899-8332711:-1
so has part: feature:8332613-8332711:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324899-8325102:-1:exon

XP_026640371.1
type: Protein
SIO_000068: ncbiprotein

position:8332711:-1
position: 8332711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8332613-8332711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8324899-8325102:-1:exon

Atp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protease ATP23 homolog isoform X3
translation: MSRVVTHELIHAFDHCRAHVHWFSDVRHLACSEIRAASLSGDCSLLNEIFRLRFGLRRHHQICVRDRAALSIVAVRNISREEAQKAVDDVFESCFNDREPFGRIPHTKMYARYAHRDFQNRDRYYSNI
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324899..8325102,8330628..8330711,8332613..8332711))
location: region:8324899-8332711:-1
so has part: feature:8332613-8332711:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324899-8325102:-1:exon

XP_026640372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8332613-8332711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8324899-8325102:-1:exon

Atp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atp23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protease ATP23 homolog isoform X3
translation: MSRVVTHELIHAFDHCRAHVHWFSDVRHLACSEIRAASLSGDCSLLNEIFRLRFGLRRHHQICVRDRAALSIVAVRNISREEAQKAVDDVFESCFNDREPFGRIPHTKMYARYAHRDFQNRDRYYSNI
SIO_010081: Atp23
subclass of: SO_0000673
so part of: Atp23
location: complement(join(8324899..8325102,8330628..8330711,8332613..8332711))
location: region:8324899-8332711:-1
so has part: feature:8332613-8332711:-1:exon
so has part: feature:8330628-8330711:-1:exon
so has part: feature:8324899-8325102:-1:exon

XP_026640373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8332613-8332711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8330628-8330711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8324899-8325102:-1:exon

Ctdsp2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ctdsp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8416600..8438590
location: region:8416600-8438590:1
so has part: feature:8416600-8438590:1:exon
subclass of: SO_0000010

101991013
type: Gene
SIO_000068: ncbigene

position:8416600:1
position: 8416600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8438590:1
position: 8438590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8416600-8438590:1:exon

Ctdsp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ctdsp2
product: CTD small phosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_005357947.2
SIO_010081: Ctdsp2
subclass of: SO_0000673
so part of: Ctdsp2
location: join(8416600..8417183,8429448..8429593,8431121..8431159,8431458..8431559,8432226..8432282,8434498..8434590,8434689..8434874,8435018..8438590)
location: region:8416600-8438590:1
so has part: feature:8416600-8417183:1:exon
so has part: feature:8429448-8429593:1:exon
so has part: feature:8431121-8431159:1:exon
so has part: feature:8431458-8431559:1:exon
so has part: feature:8432226-8432282:1:exon
so has part: feature:8434498-8434590:1:exon
so has part: feature:8434689-8434874:1:exon
so has part: feature:8435018-8438590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8416600-8417183:1:exon

position:8417183:1
position: 8417183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8429448-8429593:1:exon

position:8429448:1
position: 8429448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8429593:1
position: 8429593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8431121-8431159:1:exon

position:8431121:1
position: 8431121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8431159:1
position: 8431159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8431458-8431559:1:exon

position:8431458:1
position: 8431458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8431559:1
position: 8431559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8432226-8432282:1:exon

position:8432226:1
position: 8432226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8432282:1
position: 8432282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8434498-8434590:1:exon

position:8434498:1
position: 8434498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8434590:1
position: 8434590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8434689-8434874:1:exon

position:8434689:1
position: 8434689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8434874:1
position: 8434874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8435018-8438590:1:exon

position:8435018:1
position: 8435018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ctdsp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ctdsp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2
translation: MEHGSIITQARREDALVLTKQGLVSKSSPKKPRSRNIFKALFCCFHTQHVGQSSSSTELTSKEETNTIAKSDLLQCLQYQFYQIPGTCLLPEVTEQDQGRICVVIDLDETLVHSSFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPVFEELSGADDVYTSLGQLRAP
SIO_010081: Ctdsp2
subclass of: SO_0000673
so part of: Ctdsp2
location: join(8417120..8417183,8429448..8429593,8431121..8431159,8431458..8431559,8432226..8432282,8434498..8434590,8434689..8434874,8435018..8435143)
location: region:8417120-8435143:1
so has part: feature:8417120-8417183:1:exon
so has part: feature:8429448-8429593:1:exon
so has part: feature:8431121-8431159:1:exon
so has part: feature:8431458-8431559:1:exon
so has part: feature:8432226-8432282:1:exon
so has part: feature:8434498-8434590:1:exon
so has part: feature:8434689-8434874:1:exon
so has part: feature:8435018-8435143:1:exon

XP_005358004.1
type: Protein
SIO_000068: ncbiprotein

position:8417120:1
position: 8417120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8435143:1
position: 8435143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8417120-8417183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8429448-8429593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8431121-8431159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8431458-8431559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8432226-8432282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8434498-8434590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8434689-8434874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8435018-8435143:1:exon

Avil
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Avil
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8442943..8460279
location: region:8442943-8460279:1
so has part: feature:8442943-8460279:1:exon
subclass of: SO_0000010

101991283
type: Gene
SIO_000068: ncbigene

position:8442943:1
position: 8442943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8460279:1
position: 8460279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8442943-8460279:1:exon

Avil
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Avil
product: advillin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784450.1
SIO_010081: Avil
subclass of: SO_0000673
so part of: Avil
location: join(8442943..8443126,8444207..8444403,8445570..8445678,8445756..8445866,8446136..8446338,8446741..8446819,8446941..8447039,8447920..8448073,8448172..8448272,8448671..8448808,8448895..8449053,8449670..8449849,8452395..8452540,8453003..8453147,8455309..8455497,8455875..8455943,8457481..8457606,8459738..8460279)
location: region:8442943-8460279:1
so has part: feature:8442943-8443126:1:exon
so has part: feature:8444207-8444403:1:exon
so has part: feature:8445570-8445678:1:exon
so has part: feature:8445756-8445866:1:exon
so has part: feature:8446136-8446338:1:exon
so has part: feature:8446741-8446819:1:exon
so has part: feature:8446941-8447039:1:exon
so has part: feature:8447920-8448073:1:exon
so has part: feature:8448172-8448272:1:exon
so has part: feature:8448671-8448808:1:exon
so has part: feature:8448895-8449053:1:exon
so has part: feature:8449670-8449849:1:exon
so has part: feature:8452395-8452540:1:exon
so has part: feature:8453003-8453147:1:exon
so has part: feature:8455309-8455497:1:exon
so has part: feature:8455875-8455943:1:exon
so has part: feature:8457481-8457606:1:exon
so has part: feature:8459738-8460279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8442943-8443126:1:exon

position:8443126:1
position: 8443126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8444207-8444403:1:exon

position:8444207:1
position: 8444207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8444403:1
position: 8444403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8445570-8445678:1:exon

position:8445570:1
position: 8445570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8445678:1
position: 8445678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8445756-8445866:1:exon

position:8445756:1
position: 8445756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8445866:1
position: 8445866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8446136-8446338:1:exon

position:8446136:1
position: 8446136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8446338:1
position: 8446338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8446741-8446819:1:exon

position:8446741:1
position: 8446741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8446819:1
position: 8446819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8446941-8447039:1:exon

position:8446941:1
position: 8446941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8447039:1
position: 8447039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8447920-8448073:1:exon

position:8447920:1
position: 8447920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8448073:1
position: 8448073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8448172-8448272:1:exon

position:8448172:1
position: 8448172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8448272:1
position: 8448272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8448671-8448808:1:exon

position:8448671:1
position: 8448671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8448808:1
position: 8448808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8448895-8449053:1:exon

position:8448895:1
position: 8448895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8449053:1
position: 8449053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8449670-8449849:1:exon

position:8449670:1
position: 8449670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8449849:1
position: 8449849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8452395-8452540:1:exon

position:8452395:1
position: 8452395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8452540:1
position: 8452540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8453003-8453147:1:exon

position:8453003:1
position: 8453003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8453147:1
position: 8453147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8455309-8455497:1:exon

position:8455309:1
position: 8455309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8455497:1
position: 8455497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8455875-8455943:1:exon

position:8455875:1
position: 8455875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8455943:1
position: 8455943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8457481-8457606:1:exon

position:8457481:1
position: 8457481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8457606:1
position: 8457606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8459738-8460279:1:exon

position:8459738:1
position: 8459738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Avil
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Avil
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: advillin
translation: MELVLVPQSAHGNFYEEDCYVILSTRRVGSLLSQDIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREVQYHESDTFRGYFKQGVIYKKGGVASGMKHVETNAYDVKRLLHVKGKRNVRATEVEMSWDSFNRGDVFLLDLGMVIIQWNGPESNSGERLKAMLLAKDIRDRERGGRAEIGVVEGDKEAASLELMTILQDTLGRRSIIQPAVPDEIVDQQQKSNIMLYHVSDAAGQLAITEVATRPLVQDLLNHDDCYILDQSGTKIYVWKGKGATKVEKQAAMSKALDFIKMKGYPSSTNVETVNDGAESAMFKQLFQKWSVKDQTTGLGKIFSFGKIAKVFQEKFDVSLLHTKPEVAAQERMVDDGNGKVEVWRIENLELVPVEHQGYGFFYGGDCYLVFYTYEVNGKPHYILYIWQGRHASQDELAASAYQAVEVDQQFGGAPVQVRVSMGKEPRHFMAIFKGKLVIYEGGTSRKGNAEPDPPVRLFQIQGNDKSNTKAVEVSAFASSLNSNDVFLLRTQTEHYLWYGKGSSGDERAMAKELVELLCDGNADTVAEGQEPPEFWGLLGGKAPYANDKRLQQEILDVQVRLFECSNKTGRFLVTEVTDFTQDDLNPGDVMLLDTWDQVFLWIGAEANATEKEGALSTAQEYLVTHPSGRDPDTPILIIKQGFEPPTFTGWFLAWDPHMWSAGKSYEQLKKELGDAAAIVRITADMKNATLSLNSNESEPKYHPIEVLRKSQNQGLPEDVNPAKKENYLSEQDFVSVFGMTRGQFTALPGWKQLQLKKERGLF
SIO_010081: Avil
subclass of: SO_0000673
so part of: Avil
location: join(8443055..8443126,8444207..8444403,8445570..8445678,8445756..8445866,8446136..8446338,8446741..8446819,8446941..8447039,8447920..8448073,8448172..8448272,8448671..8448808,8448895..8449053,8449670..8449849,8452395..8452540,8453003..8453147,8455309..8455497,8455875..8455943,8457481..8457606,8459738..8459851)
location: region:8443055-8459851:1
so has part: feature:8443055-8443126:1:exon
so has part: feature:8444207-8444403:1:exon
so has part: feature:8445570-8445678:1:exon
so has part: feature:8445756-8445866:1:exon
so has part: feature:8446136-8446338:1:exon
so has part: feature:8446741-8446819:1:exon
so has part: feature:8446941-8447039:1:exon
so has part: feature:8447920-8448073:1:exon
so has part: feature:8448172-8448272:1:exon
so has part: feature:8448671-8448808:1:exon
so has part: feature:8448895-8449053:1:exon
so has part: feature:8449670-8449849:1:exon
so has part: feature:8452395-8452540:1:exon
so has part: feature:8453003-8453147:1:exon
so has part: feature:8455309-8455497:1:exon
so has part: feature:8455875-8455943:1:exon
so has part: feature:8457481-8457606:1:exon
so has part: feature:8459738-8459851:1:exon

XP_026640251.1
type: Protein
SIO_000068: ncbiprotein

position:8443055:1
position: 8443055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8459851:1
position: 8459851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8443055-8443126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8444207-8444403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8445570-8445678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8445756-8445866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8446136-8446338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8446741-8446819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8446941-8447039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8447920-8448073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8448172-8448272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8448671-8448808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8448895-8449053:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8449670-8449849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8452395-8452540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8453003-8453147:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8455309-8455497:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8455875-8455943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8457481-8457606:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8459738-8459851:1:exon

LOC101991565
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101991565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8463038..8480670)
location: region:8463038-8480670:-1
so has part: feature:8463038-8480670:-1:exon
subclass of: SO_0000010

101991565
type: Gene
SIO_000068: ncbigene

position:8463038:-1
position: 8463038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8480670:-1
position: 8480670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8463038-8480670:-1:exon

LOC101991565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101991565
product: elongation factor Ts, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026784621.1
SIO_010081: LOC101991565
subclass of: SO_0000673
so part of: LOC101991565
location: complement(join(8463038..8463516,8465439..8465526,8467694..8467816,8469250..8469378,8470056..8470226,8470421..8470590,8479770..8479881,8480501..8480670))
location: region:8463038-8480670:-1
so has part: feature:8480501-8480670:-1:exon
so has part: feature:8479770-8479881:-1:exon
so has part: feature:8470421-8470590:-1:exon
so has part: feature:8470056-8470226:-1:exon
so has part: feature:8469250-8469378:-1:exon
so has part: feature:8467694-8467816:-1:exon
so has part: feature:8465439-8465526:-1:exon
so has part: feature:8463038-8463516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8480501-8480670:-1:exon

position:8480501:-1
position: 8480501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8479770-8479881:-1:exon

position:8479770:-1
position: 8479770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8479881:-1
position: 8479881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8470421-8470590:-1:exon

position:8470421:-1
position: 8470421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8470590:-1
position: 8470590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8470056-8470226:-1:exon

position:8470056:-1
position: 8470056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8470226:-1
position: 8470226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8469250-8469378:-1:exon

position:8469250:-1
position: 8469250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8469378:-1
position: 8469378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8467694-8467816:-1:exon

position:8467694:-1
position: 8467694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8467816:-1
position: 8467816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8465439-8465526:-1:exon

position:8465439:-1
position: 8465439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8465526:-1
position: 8465526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8463038-8463516:-1:exon

position:8463516:-1
position: 8463516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101991565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101991565
product: elongation factor Ts, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005357949.2
SIO_010081: LOC101991565
subclass of: SO_0000673
so part of: LOC101991565
location: complement(join(8463038..8463516,8465439..8465526,8467694..8467816,8469250..8469378,8470056..8470226,8470421..8470597,8479770..8479836))
location: region:8463038-8479836:-1
so has part: feature:8479770-8479836:-1:exon
so has part: feature:8470421-8470597:-1:exon
so has part: feature:8470056-8470226:-1:exon
so has part: feature:8469250-8469378:-1:exon
so has part: feature:8467694-8467816:-1:exon
so has part: feature:8465439-8465526:-1:exon
so has part: feature:8463038-8463516:-1:exon

position:8479836:-1
position: 8479836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8479770-8479836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8470421-8470597:-1:exon

position:8470597:-1
position: 8470597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8470056-8470226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8469250-8469378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8467694-8467816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8465439-8465526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8463038-8463516:-1:exon

LOC101991565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101991565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor Ts, mitochondrial isoform X1
translation: MHLCAPQALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGGSILARHVPGGVLVLAPRRRPGVSPVRRRAGVSRLLERMSLLRSLRFFPVACTGLSARSVLLQSSQPWHTFHAGPSLASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEAWLHKQAQKEGWSKAAKLYGRKAKEGLIGLLQEGNTAVLVEVNCETDFVSRNLKFQQLVQQVALGTLSHCQSLQDQLSTYTKGFLNSSELSELAAGPGTEGTLKDHLALAIGKLGENMILKRAAWVKVPSGFYVGSYVHGVTQSPSLHNLVLGKYAALVVCETCEQSANLQDVGRRLGQHVVGMAPLSVGSLDDEPGGETETRMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEVEEAAEAE
SIO_010081: LOC101991565
subclass of: SO_0000673
so part of: LOC101991565
location: complement(join(8463110..8463516,8465439..8465526,8467694..8467816,8469250..8469378,8470056..8470226,8470421..8470590,8479770..8479881,8480501..8480521))
location: region:8463110-8480521:-1
so has part: feature:8480501-8480521:-1:exon
so has part: feature:8479770-8479881:-1:exon
so has part: feature:8470421-8470590:-1:exon
so has part: feature:8470056-8470226:-1:exon
so has part: feature:8469250-8469378:-1:exon
so has part: feature:8467694-8467816:-1:exon
so has part: feature:8465439-8465526:-1:exon
so has part: feature:8463110-8463516:-1:exon

XP_026640422.1
type: Protein
SIO_000068: ncbiprotein

position:8463110:-1
position: 8463110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8480521:-1
position: 8480521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8480501-8480521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8479770-8479881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8470421-8470590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8470056-8470226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8469250-8469378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8467694-8467816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8465439-8465526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8463110-8463516:-1:exon

LOC101991565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101991565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor Ts, mitochondrial isoform X2
translation: MSLLRSLRFFPVACTGLSARSVLLQSSQPWHTFHAGPSLASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEAWLHKQAQKEGWSKAAKLYGRKAKEGLIGLLQEGNTAVLVEVNCETDFVSRNLKFQQLVQQVALGTLSHCQSLQDQLSTYTKGFLNSSELSELAAGPGTEGTLKDHLALAIGKLGENMILKRAAWVKVPSGFYVGSYVHGVTQSPSLHNLVLGKYAALVVCETCEQSANLQDVGRRLGQHVVGMAPLSVGSLDDEPGGETETRMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEVEEAAEAE
SIO_010081: LOC101991565
subclass of: SO_0000673
so part of: LOC101991565
location: complement(join(8463110..8463516,8465439..8465526,8467694..8467816,8469250..8469378,8470056..8470226,8470421..8470474))
location: region:8463110-8470474:-1
so has part: feature:8470421-8470474:-1:exon
so has part: feature:8470056-8470226:-1:exon
so has part: feature:8469250-8469378:-1:exon
so has part: feature:8467694-8467816:-1:exon
so has part: feature:8465439-8465526:-1:exon
so has part: feature:8463110-8463516:-1:exon

XP_005358006.1
type: Protein
SIO_000068: ncbiprotein

position:8470474:-1
position: 8470474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8470421-8470474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8470056-8470226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8469250-8469378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8467694-8467816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8465439-8465526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8463110-8463516:-1:exon

LOC101991565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101991565
product: elongation factor Ts, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357950.2
SIO_010081: LOC101991565
subclass of: SO_0000673
so part of: LOC101991565
location: complement(join(8472178..8472893,8479770..8479881,8480003..8480179))
location: region:8472178-8480179:-1
so has part: feature:8480003-8480179:-1:exon
so has part: feature:8479770-8479881:-1:exon
so has part: feature:8472178-8472893:-1:exon

position:8472178:-1
position: 8472178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8480179:-1
position: 8480179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8480003-8480179:-1:exon

position:8480003:-1
position: 8480003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8479770-8479881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8472178-8472893:-1:exon

position:8472893:-1
position: 8472893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101991565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101991565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 3 isoform X3
translation: MASSHSDPEPEPESVFPREVRLFTDSYSESSRFCFCGHELSITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGGDVTITDLPLALQQIQYNVRANVPSGGRVKVCALSWGIDQHGFPGNYDLVLGADIVYLEPTFPLLVGTLQHLCGPQGTIYLACKMREEHGTESFFRHFLPQHFQLELAQRDEDVNINIYRARHREVRPAGPHPCC
SIO_010081: LOC101991565
subclass of: SO_0000673
so part of: LOC101991565
location: complement(join(8472484..8472893,8479770..8479881,8480003..8480179))
location: region:8472484-8480179:-1
so has part: feature:8480003-8480179:-1:exon
so has part: feature:8479770-8479881:-1:exon
so has part: feature:8472484-8472893:-1:exon

XP_005358007.1
type: Protein
SIO_000068: ncbiprotein

position:8472484:-1
position: 8472484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8480003-8480179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8479770-8479881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8472484-8472893:-1:exon

Mettl1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mettl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8480760..8484465
location: region:8480760-8484465:1
so has part: feature:8480760-8484465:1:exon
subclass of: SO_0000010

101992135
type: Gene
SIO_000068: ncbigene

position:8480760:1
position: 8480760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8484465:1
position: 8484465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8480760-8484465:1:exon

Mettl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mettl1
product: methyltransferase like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005357951.2
SIO_010081: Mettl1
subclass of: SO_0000673
so part of: Mettl1
location: join(8480760..8480862,8481681..8481844,8483078..8483262,8483376..8483489,8483631..8483732,8483882..8484465)
location: region:8480760-8484465:1
so has part: feature:8480760-8480862:1:exon
so has part: feature:8481681-8481844:1:exon
so has part: feature:8483078-8483262:1:exon
so has part: feature:8483376-8483489:1:exon
so has part: feature:8483631-8483732:1:exon
so has part: feature:8483882-8484465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8480760-8480862:1:exon

position:8480862:1
position: 8480862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8481681-8481844:1:exon

position:8481681:1
position: 8481681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8481844:1
position: 8481844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8483078-8483262:1:exon

position:8483078:1
position: 8483078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8483262:1
position: 8483262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8483376-8483489:1:exon

position:8483376:1
position: 8483376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8483489:1
position: 8483489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8483631-8483732:1:exon

position:8483631:1
position: 8483631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8483732:1
position: 8483732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8483882-8484465:1:exon

position:8483882:1
position: 8483882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mettl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mettl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine-N(7)-)-methyltransferase
translation: MAGTEAPQPQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQNKSHDDAKDEKEKQAGAQVEFADIGCGYGGLLVALSPLFPNTLILGLEIRVKVSDYVQDRIRALRAAPGGGFQNIACLRSNAMKHLPNFFRKGQLTKMFFLFPDPHFKRTKHKWRIISATLLAEYAYVLSVGGLVYTITDVLELHQWMCTHFEEHPLFERVPLEELSEDPIVEHLGTSTEEGKKVLRNGGKNFPAIFRRIQDPVLQTVTPNPTLPDH
SIO_010081: Mettl1
subclass of: SO_0000673
so part of: Mettl1
location: join(8480774..8480862,8481681..8481844,8483078..8483262,8483376..8483489,8483631..8483732,8483882..8484037)
location: region:8480774-8484037:1
so has part: feature:8480774-8480862:1:exon
so has part: feature:8481681-8481844:1:exon
so has part: feature:8483078-8483262:1:exon
so has part: feature:8483376-8483489:1:exon
so has part: feature:8483631-8483732:1:exon
so has part: feature:8483882-8484037:1:exon

XP_005358008.1
type: Protein
SIO_000068: ncbiprotein

position:8480774:1
position: 8480774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8484037:1
position: 8484037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8480774-8480862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8481681-8481844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8483078-8483262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8483376-8483489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8483631-8483732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8483882-8484037:1:exon

LOC101992418
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101992418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8486373..8490240
location: region:8486373-8490240:1
so has part: feature:8486373-8490240:1:exon
subclass of: SO_0000010

101992418
type: Gene
SIO_000068: ncbigene

position:8486373:1
position: 8486373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8490240:1
position: 8490240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8486373-8490240:1:exon

LOC101992418
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101992418
product: 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005357952.2
SIO_010081: LOC101992418
subclass of: SO_0000673
so part of: LOC101992418
location: join(8486373..8486579,8487121..8487311,8487739..8487941,8488033..8488233,8488342..8488514,8488711..8488877,8489029..8489107,8489480..8489677,8490127..8490240)
location: region:8486373-8490240:1
so has part: feature:8486373-8486579:1:exon
so has part: feature:8487121-8487311:1:exon
so has part: feature:8487739-8487941:1:exon
so has part: feature:8488033-8488233:1:exon
so has part: feature:8488342-8488514:1:exon
so has part: feature:8488711-8488877:1:exon
so has part: feature:8489029-8489107:1:exon
so has part: feature:8489480-8489677:1:exon
so has part: feature:8490127-8490240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8486373-8486579:1:exon

position:8486579:1
position: 8486579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8487121-8487311:1:exon

position:8487121:1
position: 8487121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8487311:1
position: 8487311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8487739-8487941:1:exon

position:8487739:1
position: 8487739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8487941:1
position: 8487941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8488033-8488233:1:exon

position:8488033:1
position: 8488033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8488233:1
position: 8488233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8488342-8488514:1:exon

position:8488342:1
position: 8488342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8488514:1
position: 8488514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8488711-8488877:1:exon

position:8488711:1
position: 8488711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8488877:1
position: 8488877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8489029-8489107:1:exon

position:8489029:1
position: 8489029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8489107:1
position: 8489107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8489480-8489677:1:exon

position:8489480:1
position: 8489480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8489677:1
position: 8489677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8490127-8490240:1:exon

position:8490127:1
position: 8490127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101992418
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101992418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial
translation: MTQAVSLASRVLHRVHLPPQLDASLASRSSDLAFQSLSDIPGPSMPRFLAELFCKGGLSRLHELQVQGAAHYGPIWSGSFGTLRTVYVASPALVEQLLRQESSCPERCSFSSWAEHRRRYQRACGLLTADGEEWQRLRSLLAPLLLRPQAAAGYAGTLDNVVRDLVRRLRRQRGRGSGLSNLVQDVAGEFYKFGLEGIGAVLLGSRLGSLEAEVPPDTETFIRAVGSVFVSTLLTMAMPNWMHRLVPGPWARLCRDWDQMFAFAQKHVEQREGEAAVRKQGKLGEDVPSGHHLTHFLFREKLSVQSIVGNVTELLLAGVDTVSNTLSWTLYELSRHPEVQSALYREIKAAVVPGSRAQPQALSQLRLLKAVIKEVLRLYPVVPGNSRVPDRDICVGDYIIPQNTLVSLCHYATSRDPAQFPEPNSFNPARWLGGGPAPHPFASLPFGFGKRSCIGRRLAELELQMALVQILTHFEVLPEPGALPVRPMTRTVLVPERSINLQFVDR
SIO_010081: LOC101992418
subclass of: SO_0000673
so part of: LOC101992418
location: join(8486385..8486579,8487121..8487311,8487739..8487941,8488033..8488233,8488342..8488514,8488711..8488877,8489029..8489107,8489480..8489677,8490127..8490240)
location: region:8486385-8490240:1
so has part: feature:8486385-8486579:1:exon
so has part: feature:8487121-8487311:1:exon
so has part: feature:8487739-8487941:1:exon
so has part: feature:8488033-8488233:1:exon
so has part: feature:8488342-8488514:1:exon
so has part: feature:8488711-8488877:1:exon
so has part: feature:8489029-8489107:1:exon
so has part: feature:8489480-8489677:1:exon
so has part: feature:8490127-8490240:1:exon

XP_005358009.1
type: Protein
SIO_000068: ncbiprotein

position:8486385:1
position: 8486385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8486385-8486579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8487121-8487311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8487739-8487941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8488033-8488233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8488342-8488514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8488711-8488877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8489029-8489107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8489480-8489677:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8490127-8490240:1:exon

March9
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: March9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8493054..>8497113)
location: region:8493054-8497113:-1
so has part: feature:8493054-8497113:-1:exon
subclass of: SO_0000010

101985060
type: Gene
SIO_000068: ncbigene

position:8493054:-1
position: 8493054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8497113:-1
position: 8497113
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8493054-8497113:-1:exon

March9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: March9
product: membrane associated ring-CH-type finger 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005358021.2
SIO_010081: March9
subclass of: SO_0000673
so part of: March9
location: complement(join(8493054..8494883,8495121..8495313,8495822..8495977,8496985..>8497113))
location: region:8493054-8497113:-1
so has part: feature:8496985-8497113:-1:exon
so has part: feature:8495822-8495977:-1:exon
so has part: feature:8495121-8495313:-1:exon
so has part: feature:8493054-8494883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8496985-8497113:-1:exon

position:8496985:-1
position: 8496985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8495822-8495977:-1:exon

position:8495822:-1
position: 8495822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8495977:-1
position: 8495977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8495121-8495313:-1:exon

position:8495121:-1
position: 8495121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8495313:-1
position: 8495313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8493054-8494883:-1:exon

position:8494883:-1
position: 8494883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

March9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: March9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCH9
translation: GPPPPPAPPPPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQICYGMYGFMDVVCIGLIVHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKPGPRTSRTSPPAGAPSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV
SIO_010081: March9
subclass of: SO_0000673
so part of: March9
location: complement(join(8494549..8494883,8495121..8495313,8495822..8495977,8496985..>8497113))
location: region:8494549-8497113:-1
so has part: feature:8496985-8497113:-1:exon
so has part: feature:8495822-8495977:-1:exon
so has part: feature:8495121-8495313:-1:exon
so has part: feature:8494549-8494883:-1:exon

XP_005358078.1
type: Protein
SIO_000068: ncbiprotein

position:8494549:-1
position: 8494549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8496985-8497113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8495822-8495977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8495121-8495313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8494549-8494883:-1:exon

Cdk4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cdk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8501719..8505001
location: region:8501719-8505001:1
so has part: feature:8501719-8505001:1:exon
subclass of: SO_0000010

101992694
type: Gene
SIO_000068: ncbigene

position:8501719:1
position: 8501719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8505001:1
position: 8505001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8501719-8505001:1:exon

Cdk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cdk4
product: cyclin dependent kinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_013350295.2
SIO_010081: Cdk4
subclass of: SO_0000673
so part of: Cdk4
location: join(8501719..8501878,8502138..8502230,8502326..8502562,8502697..8502832,8502946..8503113,8503266..8503375,8503883..8503933,8504042..8504177,8504630..8505001)
location: region:8501719-8505001:1
so has part: feature:8501719-8501878:1:exon
so has part: feature:8502138-8502230:1:exon
so has part: feature:8502326-8502562:1:exon
so has part: feature:8502697-8502832:1:exon
so has part: feature:8502946-8503113:1:exon
so has part: feature:8503266-8503375:1:exon
so has part: feature:8503883-8503933:1:exon
so has part: feature:8504042-8504177:1:exon
so has part: feature:8504630-8505001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8501719-8501878:1:exon

position:8501878:1
position: 8501878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8502138-8502230:1:exon

position:8502138:1
position: 8502138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8502230:1
position: 8502230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8502326-8502562:1:exon

position:8502326:1
position: 8502326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8502562:1
position: 8502562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8502697-8502832:1:exon

position:8502697:1
position: 8502697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8502832:1
position: 8502832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8502946-8503113:1:exon

position:8502946:1
position: 8502946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8503113:1
position: 8503113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8503266-8503375:1:exon

position:8503266:1
position: 8503266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8503375:1
position: 8503375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8503883-8503933:1:exon

position:8503883:1
position: 8503883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8503933:1
position: 8503933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8504042-8504177:1:exon

position:8504042:1
position: 8504042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8504177:1
position: 8504177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8504630-8505001:1:exon

position:8504630:1
position: 8504630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cdk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cdk4
product: cyclin dependent kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005357953.3
SIO_010081: Cdk4
subclass of: SO_0000673
so part of: Cdk4
location: join(8501719..8501878,8502326..8502562,8502697..8502832,8502946..8503113,8503266..8503375,8503883..8503933,8504042..8504177,8504630..8505001)
location: region:8501719-8505001:1
so has part: feature:8501719-8501878:1:exon
so has part: feature:8502326-8502562:1:exon
so has part: feature:8502697-8502832:1:exon
so has part: feature:8502946-8503113:1:exon
so has part: feature:8503266-8503375:1:exon
so has part: feature:8503883-8503933:1:exon
so has part: feature:8504042-8504177:1:exon
so has part: feature:8504630-8505001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8501719-8501878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8502326-8502562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8502697-8502832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8502946-8503113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8503266-8503375:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8503883-8503933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8504042-8504177:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8504630-8505001:1:exon

Cdk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cdk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 4
translation: MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGAGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAPPPGLPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILVTSNGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPREVSLPRGAFSPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKEESDPE
SIO_010081: Cdk4
subclass of: SO_0000673
so part of: Cdk4
location: join(8502345..8502562,8502697..8502832,8502946..8503113,8503266..8503375,8503883..8503933,8504042..8504177,8504630..8504722)
location: region:8502345-8504722:1
so has part: feature:8502345-8502562:1:exon
so has part: feature:8502697-8502832:1:exon
so has part: feature:8502946-8503113:1:exon
so has part: feature:8503266-8503375:1:exon
so has part: feature:8503883-8503933:1:exon
so has part: feature:8504042-8504177:1:exon
so has part: feature:8504630-8504722:1:exon

XP_005358010.1
type: Protein
SIO_000068: ncbiprotein

position:8502345:1
position: 8502345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8504722:1
position: 8504722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8502345-8502562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8502697-8502832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8502946-8503113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8503266-8503375:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8503883-8503933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8504042-8504177:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8504630-8504722:1:exon

Cdk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cdk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 4
translation: MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGAGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAPPPGLPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILVTSNGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPREVSLPRGAFSPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKEESDPE
SIO_010081: Cdk4
subclass of: SO_0000673
so part of: Cdk4
location: join(8502345..8502562,8502697..8502832,8502946..8503113,8503266..8503375,8503883..8503933,8504042..8504177,8504630..8504722)
location: region:8502345-8504722:1
so has part: feature:8502345-8502562:1:exon
so has part: feature:8502697-8502832:1:exon
so has part: feature:8502946-8503113:1:exon
so has part: feature:8503266-8503375:1:exon
so has part: feature:8503883-8503933:1:exon
so has part: feature:8504042-8504177:1:exon
so has part: feature:8504630-8504722:1:exon

XP_013205749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8502345-8502562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8502697-8502832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8502946-8503113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8503266-8503375:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8503883-8503933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8504042-8504177:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8504630-8504722:1:exon

Tspan31
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tspan31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8504986..8507943)
location: region:8504986-8507943:-1
so has part: feature:8504986-8507943:-1:exon
subclass of: SO_0000010

101993342
type: Gene
SIO_000068: ncbigene

position:8504986:-1
position: 8504986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8507943:-1
position: 8507943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8504986-8507943:-1:exon

Tspan31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tspan31
product: tetraspanin 31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_005357956.3
SIO_010081: Tspan31
subclass of: SO_0000673
so part of: Tspan31
location: complement(join(8504986..8505863,8505955..8506068,8506244..8506375,8506610..8506690,8507035..8507202,8507735..8507943))
location: region:8504986-8507943:-1
so has part: feature:8507735-8507943:-1:exon
so has part: feature:8507035-8507202:-1:exon
so has part: feature:8506610-8506690:-1:exon
so has part: feature:8506244-8506375:-1:exon
so has part: feature:8505955-8506068:-1:exon
so has part: feature:8504986-8505863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8507735-8507943:-1:exon

position:8507735:-1
position: 8507735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8507035-8507202:-1:exon

position:8507035:-1
position: 8507035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8507202:-1
position: 8507202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8506610-8506690:-1:exon

position:8506610:-1
position: 8506610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8506690:-1
position: 8506690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8506244-8506375:-1:exon

position:8506244:-1
position: 8506244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8506375:-1
position: 8506375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8505955-8506068:-1:exon

position:8505955:-1
position: 8505955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8506068:-1
position: 8506068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8504986-8505863:-1:exon

position:8505863:-1
position: 8505863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tspan31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tspan31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-31
translation: MVCGGFACSKNALCALNVVYMLVGLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFGISCSCLAINRSKQTDVINASWWVMSNSTRHELERSFDCCGLFNLTAPYPQDDTSCSAMCKTRSSACQMCGEKFLKHSDKALKILGGVGLFFSFTEILGVWLAMRFRNQKDPRANPSAFL
SIO_010081: Tspan31
subclass of: SO_0000673
so part of: Tspan31
location: complement(join(8505789..8505863,8505955..8506068,8506244..8506375,8506610..8506690,8507035..8507202,8507735..8507797))
location: region:8505789-8507797:-1
so has part: feature:8507735-8507797:-1:exon
so has part: feature:8507035-8507202:-1:exon
so has part: feature:8506610-8506690:-1:exon
so has part: feature:8506244-8506375:-1:exon
so has part: feature:8505955-8506068:-1:exon
so has part: feature:8505789-8505863:-1:exon

XP_005358013.1
type: Protein
SIO_000068: ncbiprotein

position:8505789:-1
position: 8505789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8507797:-1
position: 8507797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8507735-8507797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8507035-8507202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8506610-8506690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8506244-8506375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8505955-8506068:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8505789-8505863:-1:exon

Agap2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Agap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8516170..8528139
location: region:8516170-8528139:1
so has part: feature:8516170-8528139:1:exon
subclass of: SO_0000010

101993637
type: Gene
SIO_000068: ncbigene

position:8516170:1
position: 8516170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8528139:1
position: 8528139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8516170-8528139:1:exon

Agap2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Agap2
product: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005357957.2
SIO_010081: Agap2
subclass of: SO_0000673
so part of: Agap2
location: join(8516170..8517333,8518931..8518989,8519885..8519972,8520131..8520216,8520365..8520512,8521570..8521704,8522030..8522139,8522517..8522675,8522829..8522915,8522997..8523101,8523474..8523636,8523776..8523895,8524778..8524906,8525662..8525721,8525949..8526097,8526186..8526276,8526427..8526649,8526746..8527001,8527122..8528139)
location: region:8516170-8528139:1
so has part: feature:8516170-8517333:1:exon
so has part: feature:8518931-8518989:1:exon
so has part: feature:8519885-8519972:1:exon
so has part: feature:8520131-8520216:1:exon
so has part: feature:8520365-8520512:1:exon
so has part: feature:8521570-8521704:1:exon
so has part: feature:8522030-8522139:1:exon
so has part: feature:8522517-8522675:1:exon
so has part: feature:8522829-8522915:1:exon
so has part: feature:8522997-8523101:1:exon
so has part: feature:8523474-8523636:1:exon
so has part: feature:8523776-8523895:1:exon
so has part: feature:8524778-8524906:1:exon
so has part: feature:8525662-8525721:1:exon
so has part: feature:8525949-8526097:1:exon
so has part: feature:8526186-8526276:1:exon
so has part: feature:8526427-8526649:1:exon
so has part: feature:8526746-8527001:1:exon
so has part: feature:8527122-8528139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8516170-8517333:1:exon

position:8517333:1
position: 8517333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8518931-8518989:1:exon

position:8518931:1
position: 8518931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8518989:1
position: 8518989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8519885-8519972:1:exon

position:8519885:1
position: 8519885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8519972:1
position: 8519972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8520131-8520216:1:exon

position:8520131:1
position: 8520131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8520216:1
position: 8520216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8520365-8520512:1:exon

position:8520365:1
position: 8520365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8520512:1
position: 8520512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8521570-8521704:1:exon

position:8521570:1
position: 8521570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8521704:1
position: 8521704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8522030-8522139:1:exon

position:8522030:1
position: 8522030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8522139:1
position: 8522139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8522517-8522675:1:exon

position:8522517:1
position: 8522517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8522675:1
position: 8522675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8522829-8522915:1:exon

position:8522829:1
position: 8522829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8522915:1
position: 8522915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8522997-8523101:1:exon

position:8522997:1
position: 8522997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8523101:1
position: 8523101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8523474-8523636:1:exon

position:8523474:1
position: 8523474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8523636:1
position: 8523636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8523776-8523895:1:exon

position:8523776:1
position: 8523776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8523895:1
position: 8523895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8524778-8524906:1:exon

position:8524778:1
position: 8524778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8524906:1
position: 8524906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8525662-8525721:1:exon

position:8525662:1
position: 8525662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8525721:1
position: 8525721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8525949-8526097:1:exon

position:8525949:1
position: 8525949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8526097:1
position: 8526097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8526186-8526276:1:exon

position:8526186:1
position: 8526186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8526276:1
position: 8526276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8526427-8526649:1:exon

position:8526427:1
position: 8526427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8526649:1
position: 8526649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8526746-8527001:1:exon

position:8526746:1
position: 8526746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8527001:1
position: 8527001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8527122-8528139:1:exon

position:8527122:1
position: 8527122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Agap2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Agap2
product: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005357958.2
SIO_010081: Agap2
subclass of: SO_0000673
so part of: Agap2
location: join(8516170..8517333,8518931..8518989,8519885..8519972,8520131..8520216,8520365..8520512,8521570..8521704,8522030..8522139,8522517..8522675,8522829..8522915,8522997..8523101,8523474..8523636,8523776..8523895,8524778..8524906,8525949..8526097,8526186..8526276,8526427..8526649,8526746..8527001,8527122..8528139)
location: region:8516170-8528139:1
so has part: feature:8516170-8517333:1:exon
so has part: feature:8518931-8518989:1:exon
so has part: feature:8519885-8519972:1:exon
so has part: feature:8520131-8520216:1:exon
so has part: feature:8520365-8520512:1:exon
so has part: feature:8521570-8521704:1:exon
so has part: feature:8522030-8522139:1:exon
so has part: feature:8522517-8522675:1:exon
so has part: feature:8522829-8522915:1:exon
so has part: feature:8522997-8523101:1:exon
so has part: feature:8523474-8523636:1:exon
so has part: feature:8523776-8523895:1:exon
so has part: feature:8524778-8524906:1:exon
so has part: feature:8525949-8526097:1:exon
so has part: feature:8526186-8526276:1:exon
so has part: feature:8526427-8526649:1:exon
so has part: feature:8526746-8527001:1:exon
so has part: feature:8527122-8528139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8516170-8517333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8518931-8518989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8519885-8519972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8520131-8520216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8520365-8520512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8521570-8521704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8522030-8522139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8522517-8522675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8522829-8522915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8522997-8523101:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8523474-8523636:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8523776-8523895:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8524778-8524906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8525949-8526097:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8526186-8526276:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8526427-8526649:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8526746-8527001:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8527122-8528139:1:exon

Agap2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Agap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1
translation: MSRGAGALQRRTTTYLISLTLVKLESVPPPPPSPSAAAAGAPGARSSEPRDPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGAGGAEPPTLSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAPKPFKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASATATSGGGGAAVTTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPTAGSPPLTVPATPVPATSVTTTSTQPLGPAPPITLEPPAPGLKRGREGGRASTRDRKMLKFISGIFTKSTGGPPGPGPLPGPPGLSSSSGSRELLGAELRASPKAVVNSQEWTLSRSIPELRLGVLGDVRSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDESSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCTDMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSLPSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAATVAGLSTPGSLHRAAKRRTSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASINGLVKDMSTVQMGEGPEATTPMPSPSPSPSSLQLPPDQTSKHLLKPDRNLARALSTDCTPSGDLSPLSREPPPSPMVKKQRRKKLSTPSKTEGSTVQAEAKRKMWKLKSFGSLRNIYKAEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQCCESSKVKLRTDSQSEAVAIQAIRNAKGNATCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLMAIGNDTANRVWESDTRGRAKPTRDSSREERESWIRAKYEQLLFLAPLGTTEEPLGRQLWAAVQAQDVATVLLLLAHARHGPLDTSVEDPQLRSPLHLAAELAHVVITQLLLWYGADVAARDAQGRTALFYARQAGSQLCADILLQHGCPGEGGSTATTPSAATTPSITATPSPRRRSSAASLGRVETTIALV
SIO_010081: Agap2
subclass of: SO_0000673
so part of: Agap2
location: join(8516184..8517333,8518931..8518989,8519885..8519972,8520131..8520216,8520365..8520512,8521570..8521704,8522030..8522139,8522517..8522675,8522829..8522915,8522997..8523101,8523474..8523636,8523776..8523895,8524778..8524906,8525662..8525721,8525949..8526097,8526186..8526276,8526427..8526649,8526746..8527001,8527122..8527364)
location: region:8516184-8527364:1
so has part: feature:8516184-8517333:1:exon
so has part: feature:8518931-8518989:1:exon
so has part: feature:8519885-8519972:1:exon
so has part: feature:8520131-8520216:1:exon
so has part: feature:8520365-8520512:1:exon
so has part: feature:8521570-8521704:1:exon
so has part: feature:8522030-8522139:1:exon
so has part: feature:8522517-8522675:1:exon
so has part: feature:8522829-8522915:1:exon
so has part: feature:8522997-8523101:1:exon
so has part: feature:8523474-8523636:1:exon
so has part: feature:8523776-8523895:1:exon
so has part: feature:8524778-8524906:1:exon
so has part: feature:8525662-8525721:1:exon
so has part: feature:8525949-8526097:1:exon
so has part: feature:8526186-8526276:1:exon
so has part: feature:8526427-8526649:1:exon
so has part: feature:8526746-8527001:1:exon
so has part: feature:8527122-8527364:1:exon

XP_005358014.1
type: Protein
SIO_000068: ncbiprotein

position:8516184:1
position: 8516184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8527364:1
position: 8527364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8516184-8517333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8518931-8518989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8519885-8519972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8520131-8520216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8520365-8520512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8521570-8521704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8522030-8522139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8522517-8522675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8522829-8522915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8522997-8523101:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8523474-8523636:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8523776-8523895:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8524778-8524906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8525662-8525721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8525949-8526097:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8526186-8526276:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8526427-8526649:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8526746-8527001:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8527122-8527364:1:exon

Agap2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Agap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X2
translation: MSRGAGALQRRTTTYLISLTLVKLESVPPPPPSPSAAAAGAPGARSSEPRDPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGAGGAEPPTLSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAPKPFKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASATATSGGGGAAVTTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPTAGSPPLTVPATPVPATSVTTTSTQPLGPAPPITLEPPAPGLKRGREGGRASTRDRKMLKFISGIFTKSTGGPPGPGPLPGPPGLSSSSGSRELLGAELRASPKAVVNSQEWTLSRSIPELRLGVLGDVRSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDESSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCTDMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSLPSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAATVAGLSTPGSLHRAAKRRTSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASINGLVKDMSTVQMGEGPEATTPMPSPSPSPSSLQLPPDQTSKHLLKPDRNLARALSTDCTPSGDLSPLSREPPPSPMVKKQRRKKLSTPSKTEGSTVQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQCCESSKVKLRTDSQSEAVAIQAIRNAKGNATCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLMAIGNDTANRVWESDTRGRAKPTRDSSREERESWIRAKYEQLLFLAPLGTTEEPLGRQLWAAVQAQDVATVLLLLAHARHGPLDTSVEDPQLRSPLHLAAELAHVVITQLLLWYGADVAARDAQGRTALFYARQAGSQLCADILLQHGCPGEGGSTATTPSAATTPSITATPSPRRRSSAASLGRVETTIALV
SIO_010081: Agap2
subclass of: SO_0000673
so part of: Agap2
location: join(8516184..8517333,8518931..8518989,8519885..8519972,8520131..8520216,8520365..8520512,8521570..8521704,8522030..8522139,8522517..8522675,8522829..8522915,8522997..8523101,8523474..8523636,8523776..8523895,8524778..8524906,8525949..8526097,8526186..8526276,8526427..8526649,8526746..8527001,8527122..8527364)
location: region:8516184-8527364:1
so has part: feature:8516184-8517333:1:exon
so has part: feature:8518931-8518989:1:exon
so has part: feature:8519885-8519972:1:exon
so has part: feature:8520131-8520216:1:exon
so has part: feature:8520365-8520512:1:exon
so has part: feature:8521570-8521704:1:exon
so has part: feature:8522030-8522139:1:exon
so has part: feature:8522517-8522675:1:exon
so has part: feature:8522829-8522915:1:exon
so has part: feature:8522997-8523101:1:exon
so has part: feature:8523474-8523636:1:exon
so has part: feature:8523776-8523895:1:exon
so has part: feature:8524778-8524906:1:exon
so has part: feature:8525949-8526097:1:exon
so has part: feature:8526186-8526276:1:exon
so has part: feature:8526427-8526649:1:exon
so has part: feature:8526746-8527001:1:exon
so has part: feature:8527122-8527364:1:exon

XP_005358015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8516184-8517333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8518931-8518989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8519885-8519972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8520131-8520216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8520365-8520512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8521570-8521704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8522030-8522139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8522517-8522675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8522829-8522915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8522997-8523101:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8523474-8523636:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8523776-8523895:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8524778-8524906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8525949-8526097:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8526186-8526276:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8526427-8526649:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8526746-8527001:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8527122-8527364:1:exon

Os9
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Os9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8531482..8556854)
location: region:8531482-8556854:-1
so has part: feature:8531482-8556854:-1:exon
subclass of: SO_0000010

101994296
type: Gene
SIO_000068: ncbigene

position:8531482:-1
position: 8531482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8556854:-1
position: 8556854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8531482-8556854:-1:exon

Os9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Os9
product: OS9, endoplasmic reticulum lectin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005357963.2
SIO_010081: Os9
subclass of: SO_0000673
so part of: Os9
location: complement(join(8531482..8532216,8532466..8532578,8533722..8533911,8534102..8534383,8534547..8534635,8535317..8535371,8535527..8535624,8535810..8535911,8536004..8536214,8554762..8554860,8555073..8555149,8555287..8555350,8556039..8556215,8556628..8556854))
location: region:8531482-8556854:-1
so has part: feature:8556628-8556854:-1:exon
so has part: feature:8556039-8556215:-1:exon
so has part: feature:8555287-8555350:-1:exon
so has part: feature:8555073-8555149:-1:exon
so has part: feature:8554762-8554860:-1:exon
so has part: feature:8536004-8536214:-1:exon
so has part: feature:8535810-8535911:-1:exon
so has part: feature:8535527-8535624:-1:exon
so has part: feature:8535317-8535371:-1:exon
so has part: feature:8534547-8534635:-1:exon
so has part: feature:8534102-8534383:-1:exon
so has part: feature:8533722-8533911:-1:exon
so has part: feature:8532466-8532578:-1:exon
so has part: feature:8531482-8532216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8556628-8556854:-1:exon

position:8556628:-1
position: 8556628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8556039-8556215:-1:exon

position:8556039:-1
position: 8556039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8556215:-1
position: 8556215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8555287-8555350:-1:exon

position:8555287:-1
position: 8555287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8555350:-1
position: 8555350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8555073-8555149:-1:exon

position:8555073:-1
position: 8555073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8555149:-1
position: 8555149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8554762-8554860:-1:exon

position:8554762:-1
position: 8554762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8554860:-1
position: 8554860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8536004-8536214:-1:exon

position:8536004:-1
position: 8536004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8536214:-1
position: 8536214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8535810-8535911:-1:exon

position:8535810:-1
position: 8535810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8535911:-1
position: 8535911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8535527-8535624:-1:exon

position:8535527:-1
position: 8535527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8535624:-1
position: 8535624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8535317-8535371:-1:exon

position:8535317:-1
position: 8535317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8535371:-1
position: 8535371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8534547-8534635:-1:exon

position:8534547:-1
position: 8534547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8534635:-1
position: 8534635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8534102-8534383:-1:exon

position:8534102:-1
position: 8534102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8534383:-1
position: 8534383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8533722-8533911:-1:exon

position:8533722:-1
position: 8533722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8533911:-1
position: 8533911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8532466-8532578:-1:exon

position:8532466:-1
position: 8532466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8532578:-1
position: 8532578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8531482-8532216:-1:exon

position:8532216:-1
position: 8532216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Os9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Os9
product: OS9, endoplasmic reticulum lectin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005357960.2
SIO_010081: Os9
subclass of: SO_0000673
so part of: Os9
location: complement(join(8531482..8532216,8532466..8532578,8532727..8532891,8533722..8533911,8534102..8534383,8534547..8534635,8535317..8535371,8535527..8535624,8535810..8535911,8536004..8536214,8554762..8554860,8555073..8555149,8555287..8555350,8556039..8556215,8556628..8556852))
location: region:8531482-8556852:-1
so has part: feature:8556628-8556852:-1:exon
so has part: feature:8556039-8556215:-1:exon
so has part: feature:8555287-8555350:-1:exon
so has part: feature:8555073-8555149:-1:exon
so has part: feature:8554762-8554860:-1:exon
so has part: feature:8536004-8536214:-1:exon
so has part: feature:8535810-8535911:-1:exon
so has part: feature:8535527-8535624:-1:exon
so has part: feature:8535317-8535371:-1:exon
so has part: feature:8534547-8534635:-1:exon
so has part: feature:8534102-8534383:-1:exon
so has part: feature:8533722-8533911:-1:exon
so has part: feature:8532727-8532891:-1:exon
so has part: feature:8532466-8532578:-1:exon
so has part: feature:8531482-8532216:-1:exon

position:8556852:-1
position: 8556852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8556628-8556852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8556039-8556215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8555287-8555350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8555073-8555149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8554762-8554860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8536004-8536214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8535810-8535911:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8535527-8535624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8535317-8535371:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8534547-8534635:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8534102-8534383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8533722-8533911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8532727-8532891:-1:exon

position:8532727:-1
position: 8532727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8532891:-1
position: 8532891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8532466-8532578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8531482-8532216:-1:exon

Os9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Os9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OS-9 isoform X2
translation: MATETLLSRLLGLLLLGILLPARLTGGVGSLNLEELSEMRYGIQILPLPVMGGQSQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMRDAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEVKGDVLYLGYYQSAFNWDDETAKASKQHRLKRYHSQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRLCPHPLLRPPASAAPQAILCHPALQPDEYMAYLQRQAESKQLEEKITEEVQDTDHQVWSEAKSAGVAPKKEDVSLAKEDKESELWKMLHEPEEQAAGGEEAQAGEQDLNPEAAADPAPNPHDDFQSNVQVKVIRSPADFIRLMEELKGGTKKEKPNTEQQQPGDDTTGAPRREAELKEKGEEPQAVVEDEDNEEEEEEEEEDEEERQLLGEFEKELEGMLLPSDRERLRSEVKAGMERELENIIQETEKELDPDGLRKESEREQAILALTSTLDKLIKRLQENQSPDLVQKHKKKRVVPQKPPPSRPPTGKIEIKIVRPGAEGNEEDTRWLTDEDTKSLKEIFFNILVQGAEEANKERQRQKDLESNYRRVWGSPDGEDTGDLDEFDF
SIO_010081: Os9
subclass of: SO_0000673
so part of: Os9
location: complement(join(8532091..8532216,8532466..8532578,8533722..8533911,8534102..8534383,8534547..8534635,8535317..8535371,8535527..8535624,8535810..8535911,8536004..8536214,8554762..8554860,8555073..8555149,8555287..8555350,8556039..8556215,8556628..8556789))
location: region:8532091-8556789:-1
so has part: feature:8556628-8556789:-1:exon
so has part: feature:8556039-8556215:-1:exon
so has part: feature:8555287-8555350:-1:exon
so has part: feature:8555073-8555149:-1:exon
so has part: feature:8554762-8554860:-1:exon
so has part: feature:8536004-8536214:-1:exon
so has part: feature:8535810-8535911:-1:exon
so has part: feature:8535527-8535624:-1:exon
so has part: feature:8535317-8535371:-1:exon
so has part: feature:8534547-8534635:-1:exon
so has part: feature:8534102-8534383:-1:exon
so has part: feature:8533722-8533911:-1:exon
so has part: feature:8532466-8532578:-1:exon
so has part: feature:8532091-8532216:-1:exon

XP_005358020.1
type: Protein
SIO_000068: ncbiprotein

position:8532091:-1
position: 8532091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8556789:-1
position: 8556789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8556628-8556789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8556039-8556215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8555287-8555350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8555073-8555149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8554762-8554860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8536004-8536214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8535810-8535911:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8535527-8535624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8535317-8535371:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8534547-8534635:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8534102-8534383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8533722-8533911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8532466-8532578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8532091-8532216:-1:exon

Os9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Os9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OS-9 isoform X1
translation: MATETLLSRLLGLLLLGILLPARLTGGVGSLNLEELSEMRYGIQILPLPVMGGQSQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMRDAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEVKGDVLYLGYYQSAFNWDDETAKASKQHRLKRYHSQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRLCPHPLLRPPASAAPQAILCHPALQPDEYMAYLQRQAESKQLEEKITEEVQDTDHQVWSEAKSAGVAPKKEDVSLAKEDKESELWKMLHEPEEQAAGGEEAQAGEQDLNPEAAADPAPNPHDDFQSNVQVKVIRSPADFIRLMEELKGGTKKEKPNTEQQQPGDDTTGAPRREAELKEKGEEPQAVVEDEDNEEEEEEEEEDEEERQLLGEFEKELEGMLLPSDRERLRSEVKAGMERELENIIQETEKELDPDGLRKESEREQAILALTSTLDKLIKRLQENQSPDLVQKHKKKRVVPQKPPPSRPPTEEEPEHRVRVRVTKLRHGGPNRDLTVLEMKRENPQLRQIEGLVEEVLEREGLAAQGKIEIKIVRPGAEGNEEDTRWLTDEDTKSLKEIFFNILVQGAEEANKERQRQKDLESNYRRVWGSPDGEDTGDLDEFDF
SIO_010081: Os9
subclass of: SO_0000673
so part of: Os9
location: complement(join(8532091..8532216,8532466..8532578,8532727..8532891,8533722..8533911,8534102..8534383,8534547..8534635,8535317..8535371,8535527..8535624,8535810..8535911,8536004..8536214,8554762..8554860,8555073..8555149,8555287..8555350,8556039..8556215,8556628..8556789))
location: region:8532091-8556789:-1
so has part: feature:8556628-8556789:-1:exon
so has part: feature:8556039-8556215:-1:exon
so has part: feature:8555287-8555350:-1:exon
so has part: feature:8555073-8555149:-1:exon
so has part: feature:8554762-8554860:-1:exon
so has part: feature:8536004-8536214:-1:exon
so has part: feature:8535810-8535911:-1:exon
so has part: feature:8535527-8535624:-1:exon
so has part: feature:8535317-8535371:-1:exon
so has part: feature:8534547-8534635:-1:exon
so has part: feature:8534102-8534383:-1:exon
so has part: feature:8533722-8533911:-1:exon
so has part: feature:8532727-8532891:-1:exon
so has part: feature:8532466-8532578:-1:exon
so has part: feature:8532091-8532216:-1:exon

XP_005358017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8556628-8556789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8556039-8556215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8555287-8555350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8555073-8555149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8554762-8554860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8536004-8536214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8535810-8535911:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8535527-8535624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8535317-8535371:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8534547-8534635:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8534102-8534383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8533722-8533911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8532727-8532891:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8532466-8532578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8532091-8532216:-1:exon

LOC113457393
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457393
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8536848..8536951
location: region:8536848-8536951:1
so has part: feature:8536848-8536951:1:exon
subclass of: SO_0000623

113457393
type: Gene
SIO_000068: ncbigene

position:8536848:1
position: 8536848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8536951:1
position: 8536951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8536848-8536951:1:exon

LOC113457393
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457393
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377980.1
SIO_010081: LOC113457393
subclass of: SO_0000673
so part of: LOC113457393
location: 8536848..8536951
location: region:8536848-8536951:1
so has part: feature:8536848-8536951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8536848-8536951:1:exon

B4galnt1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: B4galnt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8587043..8594185
location: region:8587043-8594185:1
so has part: feature:8587043-8594185:1:exon
subclass of: SO_0000010

101996147
type: Gene
SIO_000068: ncbigene

position:8587043:1
position: 8587043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8594185:1
position: 8594185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8587043-8594185:1:exon

B4galnt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: B4galnt1
product: beta-1,4-N-acetyl-galactosaminyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005357969.2
SIO_010081: B4galnt1
subclass of: SO_0000673
so part of: B4galnt1
location: join(8587043..8587338,8587891..8588109,8588670..8588834,8588938..8589044,8589456..8589496,8589630..8589810,8591508..8591606,8591725..8591915,8592395..8592535,8592731..8592971,8593500..8594185)
location: region:8587043-8594185:1
so has part: feature:8587043-8587338:1:exon
so has part: feature:8587891-8588109:1:exon
so has part: feature:8588670-8588834:1:exon
so has part: feature:8588938-8589044:1:exon
so has part: feature:8589456-8589496:1:exon
so has part: feature:8589630-8589810:1:exon
so has part: feature:8591508-8591606:1:exon
so has part: feature:8591725-8591915:1:exon
so has part: feature:8592395-8592535:1:exon
so has part: feature:8592731-8592971:1:exon
so has part: feature:8593500-8594185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8587043-8587338:1:exon

position:8587338:1
position: 8587338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8587891-8588109:1:exon

position:8587891:1
position: 8587891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8588109:1
position: 8588109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8588670-8588834:1:exon

position:8588670:1
position: 8588670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8588834:1
position: 8588834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8588938-8589044:1:exon

position:8588938:1
position: 8588938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8589044:1
position: 8589044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8589456-8589496:1:exon

position:8589456:1
position: 8589456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8589496:1
position: 8589496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8589630-8589810:1:exon

position:8589630:1
position: 8589630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8589810:1
position: 8589810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8591508-8591606:1:exon

position:8591508:1
position: 8591508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8591606:1
position: 8591606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8591725-8591915:1:exon

position:8591725:1
position: 8591725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8591915:1
position: 8591915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8592395-8592535:1:exon

position:8592395:1
position: 8592395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8592535:1
position: 8592535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8592731-8592971:1:exon

position:8592731:1
position: 8592731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8592971:1
position: 8592971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8593500-8594185:1:exon

position:8593500:1
position: 8593500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B4galnt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: B4galnt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4 N-acetylgalactosaminyltransferase 1
translation: MRLSRRALYALVLLLACASLGLLYASTRDAPRLQNPLTLWSPPQGPPKLDLLDLAPEPRYAHIPVRFKEQVVGLLTPYNCSCEPRGGSFAFPFQRQARVINLTKAFNAEELQTVSVARELEYQAFLARSQSLTDQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQEAAAQGVYQVNLIASLGTWDVAGDVEGVTLTGEGQPNLTLASPGLDRLNRQLQLVTYSSRSHQANTADTVRFSTKGHEAAFTIRIRYPPRPRLYPPSSAREGAQYNISALVTIATKTFIRYERLRTLIASIRRFYPTVTIIIADDSDKPERISDPHVEHYFMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFVFTARTRLEKLVNVLERTPLDLVGGAVREISGFSTTFRQLLTVEPGAPGLGDCLRHKRGFHHELLGFPNCVVTDGVVNFFLARTDKVREVGFDPRLNRVAHLEFFLDGLGSLRVGSCSDVVVDHASKVKLPWVSKDTQADTYARYRYPGSLDQSQVAKHRLLFFKHRLQCVTAE
SIO_010081: B4galnt1
subclass of: SO_0000673
so part of: B4galnt1
location: join(8587892..8588109,8588670..8588834,8588938..8589044,8589456..8589496,8589630..8589810,8591508..8591606,8591725..8591915,8592395..8592535,8592731..8592971,8593500..8593717)
location: region:8587892-8593717:1
so has part: feature:8587892-8588109:1:exon
so has part: feature:8588670-8588834:1:exon
so has part: feature:8588938-8589044:1:exon
so has part: feature:8589456-8589496:1:exon
so has part: feature:8589630-8589810:1:exon
so has part: feature:8591508-8591606:1:exon
so has part: feature:8591725-8591915:1:exon
so has part: feature:8592395-8592535:1:exon
so has part: feature:8592731-8592971:1:exon
so has part: feature:8593500-8593717:1:exon

XP_005358026.1
type: Protein
SIO_000068: ncbiprotein

position:8587892:1
position: 8587892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8593717:1
position: 8593717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8587892-8588109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8588670-8588834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8588938-8589044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8589456-8589496:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8589630-8589810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8591508-8591606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8591725-8591915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8592395-8592535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8592731-8592971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8593500-8593717:1:exon

Slc26a10
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc26a10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8594241..8601632)
location: region:8594241-8601632:-1
so has part: feature:8594241-8601632:-1:exon
subclass of: SO_0000010

101996425
type: Gene
SIO_000068: ncbigene

position:8594241:-1
position: 8594241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8601632:-1
position: 8601632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8594241-8601632:-1:exon

Slc26a10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc26a10
product: solute carrier family 26 member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784577.1
SIO_010081: Slc26a10
subclass of: SO_0000673
so part of: Slc26a10
location: complement(join(8594241..8594408,8594817..8594923,8595027..8595081,8595181..8595263,8595342..8595375,8595496..8595612,8595681..8595750,8595862..8595968,8596371..8596466,8596553..8596630,8598013..8598126,8598222..8598369,8598513..8598595,8599194..8599346,8599561..8599725,8599934..8600091,8600763..8600873,8601269..8601632))
location: region:8594241-8601632:-1
so has part: feature:8601269-8601632:-1:exon
so has part: feature:8600763-8600873:-1:exon
so has part: feature:8599934-8600091:-1:exon
so has part: feature:8599561-8599725:-1:exon
so has part: feature:8599194-8599346:-1:exon
so has part: feature:8598513-8598595:-1:exon
so has part: feature:8598222-8598369:-1:exon
so has part: feature:8598013-8598126:-1:exon
so has part: feature:8596553-8596630:-1:exon
so has part: feature:8596371-8596466:-1:exon
so has part: feature:8595862-8595968:-1:exon
so has part: feature:8595681-8595750:-1:exon
so has part: feature:8595496-8595612:-1:exon
so has part: feature:8595342-8595375:-1:exon
so has part: feature:8595181-8595263:-1:exon
so has part: feature:8595027-8595081:-1:exon
so has part: feature:8594817-8594923:-1:exon
so has part: feature:8594241-8594408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8601269-8601632:-1:exon

position:8601269:-1
position: 8601269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8600763-8600873:-1:exon

position:8600763:-1
position: 8600763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8600873:-1
position: 8600873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8599934-8600091:-1:exon

position:8599934:-1
position: 8599934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8600091:-1
position: 8600091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8599561-8599725:-1:exon

position:8599561:-1
position: 8599561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8599725:-1
position: 8599725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8599194-8599346:-1:exon

position:8599194:-1
position: 8599194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8599346:-1
position: 8599346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8598513-8598595:-1:exon

position:8598513:-1
position: 8598513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8598595:-1
position: 8598595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8598222-8598369:-1:exon

position:8598222:-1
position: 8598222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8598369:-1
position: 8598369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8598013-8598126:-1:exon

position:8598013:-1
position: 8598013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8598126:-1
position: 8598126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8596553-8596630:-1:exon

position:8596553:-1
position: 8596553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8596630:-1
position: 8596630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8596371-8596466:-1:exon

position:8596371:-1
position: 8596371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8596466:-1
position: 8596466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8595862-8595968:-1:exon

position:8595862:-1
position: 8595862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8595968:-1
position: 8595968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8595681-8595750:-1:exon

position:8595681:-1
position: 8595681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8595750:-1
position: 8595750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8595496-8595612:-1:exon

position:8595496:-1
position: 8595496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8595612:-1
position: 8595612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8595342-8595375:-1:exon

position:8595342:-1
position: 8595342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8595375:-1
position: 8595375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8595181-8595263:-1:exon

position:8595181:-1
position: 8595181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8595263:-1
position: 8595263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8595027-8595081:-1:exon

position:8595027:-1
position: 8595027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8595081:-1
position: 8595081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8594817-8594923:-1:exon

position:8594817:-1
position: 8594817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8594923:-1
position: 8594923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8594241-8594408:-1:exon

position:8594408:-1
position: 8594408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc26a10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc26a10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 26 member 10
translation: MLQGAKDKMSGSLVSRTCSGPEEVSDLKSPLSSRFREPLTHARFQELYGGAEEPEVPAEPRLPWLCGLWRRRAGCCSGPGAWRVLQARLPPLRWLPHYRWRAWLLGDAVAGVTVGVVHVPQGMAFALLTSVPPVFGLYTSFFPVLIYSLLGTGRHLSTGTFAVLSLMTGSVVERLVPDPLAGNLSEIEREQLEARRVGAAAAVAFGSGALMLAMFALQLGVLSTFLSEPVVKALTSGAALHVLVSQLPSLLGLSLPRQIGCFSLFKTLAAVLTALARSSPAELTISALSLALLVPVKELNVRFRDRLPTPIPGEVVMVLLASVLCFASSLDTRYNVQVVGVLPGGFPQPLFPSLDELPRILADSLPIALVTFAVSTSLASIYADKYSYTIDPNQELFAHGVSNLISSLFSCFPNSATLATTSLLVDAGGNTQLAGLFSCIVVLAVLLWLGPFFYYLPKAVLACINISSMRQMFFQMQELPQLWHISRVDFAVWMVTWVAVVTLNVDLGLAVGVVVSMMTVVCRTQRVQCLALGLAEGTELYRPLRESHKLLQVPGLCILSYPTPLYFATRGQFRHILEWRLGLGERGKQSPKLGSLPDKGVEPIRVVVLDFSGISFVDAAGAREVVQLTRRCQDAGICLLLAQCNALVLETLTRAGLLERMTPEQLFVSVQDAAAHALERLKPTGPKICTVWV
SIO_010081: Slc26a10
subclass of: SO_0000673
so part of: Slc26a10
location: complement(join(8594370..8594408,8594817..8594923,8595027..8595081,8595181..8595263,8595342..8595375,8595496..8595612,8595681..8595750,8595862..8595968,8596371..8596466,8596553..8596630,8598013..8598126,8598222..8598369,8598513..8598595,8599194..8599346,8599561..8599725,8599934..8600091,8600763..8600873,8601269..8601632))
location: region:8594370-8601632:-1
so has part: feature:8601269-8601632:-1:exon
so has part: feature:8600763-8600873:-1:exon
so has part: feature:8599934-8600091:-1:exon
so has part: feature:8599561-8599725:-1:exon
so has part: feature:8599194-8599346:-1:exon
so has part: feature:8598513-8598595:-1:exon
so has part: feature:8598222-8598369:-1:exon
so has part: feature:8598013-8598126:-1:exon
so has part: feature:8596553-8596630:-1:exon
so has part: feature:8596371-8596466:-1:exon
so has part: feature:8595862-8595968:-1:exon
so has part: feature:8595681-8595750:-1:exon
so has part: feature:8595496-8595612:-1:exon
so has part: feature:8595342-8595375:-1:exon
so has part: feature:8595181-8595263:-1:exon
so has part: feature:8595027-8595081:-1:exon
so has part: feature:8594817-8594923:-1:exon
so has part: feature:8594370-8594408:-1:exon

XP_026640378.1
type: Protein
SIO_000068: ncbiprotein

position:8594370:-1
position: 8594370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8601269-8601632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8600763-8600873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8599934-8600091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8599561-8599725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8599194-8599346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8598513-8598595:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8598222-8598369:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8598013-8598126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8596553-8596630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8596371-8596466:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8595862-8595968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8595681-8595750:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8595496-8595612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8595342-8595375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8595181-8595263:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8595027-8595081:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8594817-8594923:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8594370-8594408:-1:exon

Arhgef25
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Arhgef25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8603532..8611862)
location: region:8603532-8611862:-1
so has part: feature:8603532-8611862:-1:exon
subclass of: SO_0000010

101996705
type: Gene
SIO_000068: ncbigene

position:8603532:-1
position: 8603532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8611862:-1
position: 8611862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8603532-8611862:-1:exon

Arhgef25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef25
product: Rho guanine nucleotide exchange factor 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005357971.2
SIO_010081: Arhgef25
subclass of: SO_0000673
so part of: Arhgef25
location: complement(join(8603532..8603977,8604226..8604437,8604698..8604878,8605003..8605203,8605389..8605466,8605632..8605682,8606308..8606400,8606498..8606587,8606698..8606767,8607561..8607664,8607846..8607912,8608083..8608159,8608744..8608839,8608963..8609177,8611357..8611471,8611730..8611862))
location: region:8603532-8611862:-1
so has part: feature:8611730-8611862:-1:exon
so has part: feature:8611357-8611471:-1:exon
so has part: feature:8608963-8609177:-1:exon
so has part: feature:8608744-8608839:-1:exon
so has part: feature:8608083-8608159:-1:exon
so has part: feature:8607846-8607912:-1:exon
so has part: feature:8607561-8607664:-1:exon
so has part: feature:8606698-8606767:-1:exon
so has part: feature:8606498-8606587:-1:exon
so has part: feature:8606308-8606400:-1:exon
so has part: feature:8605632-8605682:-1:exon
so has part: feature:8605389-8605466:-1:exon
so has part: feature:8605003-8605203:-1:exon
so has part: feature:8604698-8604878:-1:exon
so has part: feature:8604226-8604437:-1:exon
so has part: feature:8603532-8603977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8611730-8611862:-1:exon

position:8611730:-1
position: 8611730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8611357-8611471:-1:exon

position:8611357:-1
position: 8611357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8611471:-1
position: 8611471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8608963-8609177:-1:exon

position:8608963:-1
position: 8608963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8609177:-1
position: 8609177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8608744-8608839:-1:exon

position:8608744:-1
position: 8608744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8608839:-1
position: 8608839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8608083-8608159:-1:exon

position:8608083:-1
position: 8608083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8608159:-1
position: 8608159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8607846-8607912:-1:exon

position:8607846:-1
position: 8607846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8607912:-1
position: 8607912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8607561-8607664:-1:exon

position:8607561:-1
position: 8607561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8607664:-1
position: 8607664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8606698-8606767:-1:exon

position:8606698:-1
position: 8606698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8606767:-1
position: 8606767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8606498-8606587:-1:exon

position:8606498:-1
position: 8606498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8606587:-1
position: 8606587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8606308-8606400:-1:exon

position:8606308:-1
position: 8606308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition