Microtus ochrogaster isolate Prairie Vole_2 chromosome 21, MicOch1.0, whole genome shotgun sequence.
type: Entry
definition: Microtus ochrogaster isolate Prairie Vole_2 chromosome 21, MicOch1.0, whole genome shotgun sequence.
sequence version: NC_022022.1
sequence date: 2018-10-15
sequence: sequence
division: CON
label: NC_022022.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210839
dblink: SAMN00727831
keyword: WGS
keyword: RefSeq
source: Microtus ochrogaster (prairie vole)
organism: Microtus ochrogaster
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Arvicolinae; Microtus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001685.1.\nAssembly name: MicOch1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/12/07. The original whole-genome shotgun project has the\naccession AHZW00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: allpaths v. R41985 HAPLOIDIFY=True\n SPRS_WRITE_SEPS=True\nAssembly Name :: MicOch1.0\nGenome Coverage :: 94x\nSequencing Technology :: Illumina Hi-Seq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Microtus ochrogaster Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 51076971
topology: linear
so has quality: SO_0000987
location: 1..51076971
location: region:1-51076971:1
RO_0002162: 79684

NC_022022
type: RefSeq
SIO_000068: refseq

PRJNA210839
type: BioProject
SIO_000068: bioproject

SAMN00727831
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51076971:1
position: 51076971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-51076971:1:source
so part of: sequence
organism: Microtus ochrogaster
mol type: genomic DNA
isolate: Prairie Vole_2
chromosome: 21
sex: female

79684
type: Taxonomy
SIO_000068: taxonomy

LOC101979775
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(129..9192)
location: region:129-9192:-1
so has part: feature:129-9192:-1:exon
subclass of: SO_0000010

101979775
type: Gene
SIO_000068: ncbigene

position:129:-1
position: 129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9192:-1
position: 9192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129-9192:-1:exon

LOC101979775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101979775
product: KH homology domain-containing protein 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005356853.3
SIO_010081: LOC101979775
subclass of: SO_0000673
so part of: LOC101979775
location: complement(join(129..546,843..895,6096..6175,6480..6608,8202..8421,8857..9192))
location: region:129-9192:-1
so has part: feature:8857-9192:-1:exon
so has part: feature:8202-8421:-1:exon
so has part: feature:6480-6608:-1:exon
so has part: feature:6096-6175:-1:exon
so has part: feature:843-895:-1:exon
so has part: feature:129-546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8857-9192:-1:exon

position:8857:-1
position: 8857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8202-8421:-1:exon

position:8202:-1
position: 8202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8421:-1
position: 8421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6480-6608:-1:exon

position:6480:-1
position: 6480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6608:-1
position: 6608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6096-6175:-1:exon

position:6096:-1
position: 6096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6175:-1
position: 6175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:843-895:-1:exon

position:843:-1
position: 843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895:-1
position: 895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129-546:-1:exon

position:546:-1
position: 546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101979775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101979775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH homology domain-containing protein 4-like isoform X1
translation: MSAGSATHPAAGGRRSKWDQPAPAPLLFLPPAAPGGEVTSSGGSPGAATTAAPSGALDAAAAVAAKINAMLMAKGKLKPSQNAAEKLQAPGKGLTSNKSKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATGTSPTFNGATVTVYHQPAPIAQLSPAINQKPSFQSGVGFGKRLFVLTLMSVQNNT
SIO_010081: LOC101979775
subclass of: SO_0000673
so part of: LOC101979775
location: complement(join(323..546,843..895,6096..6175,6480..6608,8202..8421,8857..8894))
location: region:323-8894:-1
so has part: feature:8857-8894:-1:exon
so has part: feature:8202-8421:-1:exon
so has part: feature:6480-6608:-1:exon
so has part: feature:6096-6175:-1:exon
so has part: feature:843-895:-1:exon
so has part: feature:323-546:-1:exon

XP_005356910.3
type: Protein
SIO_000068: ncbiprotein

position:323:-1
position: 323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8894:-1
position: 8894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8857-8894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8202-8421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6480-6608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6096-6175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843-895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323-546:-1:exon

LOC101979775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101979775
product: KH homology domain-containing protein 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026783883.1
SIO_010081: LOC101979775
subclass of: SO_0000673
so part of: LOC101979775
location: complement(join(1735..1828,6096..6175,6480..6608,8202..8421,8857..9192))
location: region:1735-9192:-1
so has part: feature:8857-9192:-1:exon
so has part: feature:8202-8421:-1:exon
so has part: feature:6480-6608:-1:exon
so has part: feature:6096-6175:-1:exon
so has part: feature:1735-1828:-1:exon

position:1735:-1
position: 1735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8857-9192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8202-8421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6480-6608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6096-6175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1735-1828:-1:exon

position:1828:-1
position: 1828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101979775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101979775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH homology domain-containing protein 4-like isoform X2
translation: MSAGSATHPAAGGRRSKWDQPAPAPLLFLPPAAPGGEVTSSGGSPGAATTAAPSGALDAAAAVAAKINAMLMAKGKLKPSQNAAEKLQAPGKGLTSNKSKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPGYCDHT
SIO_010081: LOC101979775
subclass of: SO_0000673
so part of: LOC101979775
location: complement(join(1810..1828,6096..6175,6480..6608,8202..8421,8857..8894))
location: region:1810-8894:-1
so has part: feature:8857-8894:-1:exon
so has part: feature:8202-8421:-1:exon
so has part: feature:6480-6608:-1:exon
so has part: feature:6096-6175:-1:exon
so has part: feature:1810-1828:-1:exon

XP_026639684.1
type: Protein
SIO_000068: ncbiprotein

position:1810:-1
position: 1810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8857-8894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8202-8421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6480-6608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6096-6175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1810-1828:-1:exon

Rxfp4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rxfp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16404..17464
location: region:16404-17464:1
so has part: feature:16404-17464:1:exon
subclass of: SO_0000010

102000532
type: Gene
SIO_000068: ncbigene

position:16404:1
position: 16404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17464:1
position: 17464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16404-17464:1:exon

Rxfp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rxfp4
product: relaxin family peptide/INSL5 receptor 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784096.1
SIO_010081: Rxfp4
subclass of: SO_0000673
so part of: Rxfp4
location: join(16404..16432,16563..17464)
location: region:16404-17464:1
so has part: feature:16404-16432:1:exon
so has part: feature:16563-17464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16404-16432:1:exon

position:16432:1
position: 16432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16563-17464:1:exon

position:16563:1
position: 16563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rxfp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rxfp4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:16627..16629,aa:OTHER)
transl except: (pos:16654..16656,aa:OTHER)
transl except: (pos:16714..16716,aa:OTHER)
transl except: (pos:16875..16877,aa:OTHER)
product: LOW QUALITY PROTEIN: relaxin-3 receptor 2
translation: MDLLVPVLQLSYQCLSVLVVLPSLSLHLSVFXACVVILAVXVVAALVTVPTATFGAEGGLXGVRLCLLRFPSRYWLGAYQLQGVVLAFIVSLGTITTXLLLAFPQSPQWCRPPRXCRPPQWQDSRVVARSVPVLMASFILCWFSNHAVTLWGILVMFYLVPWDSTFYIIHTCVFPVITRLAHSNSCLNPVLXCLLWCQPQQVLVSAFRDSWSRVWPPKQGLCGSGRWVAGTQRVDSRQAQTQRXTPGCHLDVPVPFSEIYRGQNPQILGRSCALCQSVGFPGKV
SIO_010081: Rxfp4
subclass of: SO_0000673
so part of: Rxfp4
location: join(16404..16432,16563..17384)
location: region:16404-17384:1
so has part: feature:16404-16432:1:exon
so has part: feature:16563-17384:1:exon

XP_026639897.1
type: Protein
SIO_000068: ncbiprotein

position:17384:1
position: 17384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16404-16432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16563-17384:1:exon

Arhgef2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Arhgef2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20816..83529)
location: region:20816-83529:-1
so has part: feature:20816-83529:-1:exon
subclass of: SO_0000010

101980246
type: Gene
SIO_000068: ncbigene

position:20816:-1
position: 20816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83529:-1
position: 83529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20816-83529:-1:exon

Arhgef2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef2
product: Rho/Rac guanine nucleotide exchange factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784023.1
SIO_010081: Arhgef2
subclass of: SO_0000673
so part of: Arhgef2
location: complement(join(20816..24215,24814..24997,26002..26445,26624..26674,26884..26919,27056..27123,27224..27340,27663..27863,29821..29888,31302..31471,32450..32526,34525..34773,34900..35017,35696..35821,36473..36723,37291..37437,37582..37691,37870..37999,38972..39035,39280..39347,41340..41484,57623..57716,58759..58801,59517..59589,67242..67371,69321..69604,83118..83529))
location: region:20816-83529:-1
so has part: feature:83118-83529:-1:exon
so has part: feature:69321-69604:-1:exon
so has part: feature:67242-67371:-1:exon
so has part: feature:59517-59589:-1:exon
so has part: feature:58759-58801:-1:exon
so has part: feature:57623-57716:-1:exon
so has part: feature:41340-41484:-1:exon
so has part: feature:39280-39347:-1:exon
so has part: feature:38972-39035:-1:exon
so has part: feature:37870-37999:-1:exon
so has part: feature:37582-37691:-1:exon
so has part: feature:37291-37437:-1:exon
so has part: feature:36473-36723:-1:exon
so has part: feature:35696-35821:-1:exon
so has part: feature:34900-35017:-1:exon
so has part: feature:34525-34773:-1:exon
so has part: feature:32450-32526:-1:exon
so has part: feature:31302-31471:-1:exon
so has part: feature:29821-29888:-1:exon
so has part: feature:27663-27863:-1:exon
so has part: feature:27224-27340:-1:exon
so has part: feature:27056-27123:-1:exon
so has part: feature:26884-26919:-1:exon
so has part: feature:26624-26674:-1:exon
so has part: feature:26002-26445:-1:exon
so has part: feature:24814-24997:-1:exon
so has part: feature:20816-24215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83118-83529:-1:exon

position:83118:-1
position: 83118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69321-69604:-1:exon

position:69321:-1
position: 69321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69604:-1
position: 69604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67242-67371:-1:exon

position:67242:-1
position: 67242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67371:-1
position: 67371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59517-59589:-1:exon

position:59517:-1
position: 59517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59589:-1
position: 59589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58759-58801:-1:exon

position:58759:-1
position: 58759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58801:-1
position: 58801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57623-57716:-1:exon

position:57623:-1
position: 57623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57716:-1
position: 57716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:41340-41484:-1:exon

position:41340:-1
position: 41340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41484:-1
position: 41484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39280-39347:-1:exon

position:39280:-1
position: 39280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39347:-1
position: 39347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:38972-39035:-1:exon

position:38972:-1
position: 38972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39035:-1
position: 39035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:37870-37999:-1:exon

position:37870:-1
position: 37870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37999:-1
position: 37999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:37582-37691:-1:exon

position:37582:-1
position: 37582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37691:-1
position: 37691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:37291-37437:-1:exon

position:37291:-1
position: 37291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37437:-1
position: 37437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:36473-36723:-1:exon

position:36473:-1
position: 36473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36723:-1
position: 36723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:35696-35821:-1:exon

position:35696:-1
position: 35696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35821:-1
position: 35821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:34900-35017:-1:exon

position:34900:-1
position: 34900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35017:-1
position: 35017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:34525-34773:-1:exon

position:34525:-1
position: 34525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34773:-1
position: 34773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:32450-32526:-1:exon

position:32450:-1
position: 32450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32526:-1
position: 32526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:31302-31471:-1:exon

position:31302:-1
position: 31302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31471:-1
position: 31471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:29821-29888:-1:exon

position:29821:-1
position: 29821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29888:-1
position: 29888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:27663-27863:-1:exon

position:27663:-1
position: 27663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27863:-1
position: 27863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:27224-27340:-1:exon

position:27224:-1
position: 27224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27340:-1
position: 27340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
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Arhgef2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef2
product: Rho/Rac guanine nucleotide exchange factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_026784024.1
SIO_010081: Arhgef2
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so part of: Arhgef2
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location: region:20816-53060:-1
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Arhgef2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef2
product: Rho/Rac guanine nucleotide exchange factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026784025.1
SIO_010081: Arhgef2
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location: region:20816-52851:-1
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Arhgef2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef2
product: Rho/Rac guanine nucleotide exchange factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_013349828.2
SIO_010081: Arhgef2
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location: region:20816-52744:-1
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Arhgef2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef2
product: Rho/Rac guanine nucleotide exchange factor 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_026784026.1
SIO_010081: Arhgef2
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Arhgef2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef2
product: Rho/Rac guanine nucleotide exchange factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
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SIO_010081: Arhgef2
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urn:…
SIO_000300: 22
SIO_000628: feature:20816-24215:-1:exon

Arhgef2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 2 isoform X1
translation: MKRTWRQREGPDGVVLSRLTSSFQALQLGHPSTSQSCLRVPSMNKSAPEESLVGEGPVSQGHSQCCLSEVESSQQLEEESGRKRKQEDSDGAHASPLRRCGAFRTHNHTNDSFKRHSWGPDKDLQDPMSRRRLQSLGCPGSQEDPFLQSHEELDTFLGAQQQPQLCGQPSSHPAPGMLSKAVSMSGINFLLDCLDPDAGNSFRSSATDLSKCGNQLEEDSGAWAGSSLRRTFSFLLGMTGKAKTREKEKMKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTTRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNMRNRTLSVESLIDEGAEVIYNELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALCPGSTRNFVIHRLGDLLISQFSGSSAEQMRKTYSEFCSRHTKALKLYKELYARDKRFQQFIRKVTRSAVLKRHGVQECILLVTQRITKYPVLINRILQHSHGIEEECQDLTAALGLVKELLSNVDQDVHELEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLLWKTAAGRFKDVLLLLMTDVLVFLQEKDQKYIFPALDKPSVVSLQNLIVRDIANQAKGMFLISAGPPEMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETEDEAYLRRIKMELQQKDRALVELLQEKVGLFAEMTHFQADEDSVSGMPLPTLPRGLFRSESLESPRGERLLRDAIREVEGLKDLLVGPGADLLLTPREPALPLEPDSGNTSPGVTANGEARTFNGSIELCRADSDASQKDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERWEKLSRANSRDGEAGRAVVAPAAPEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEARRQLAALGQNEPLPAEAPWARRPLDPRRRSLPAGDALYLSFNPPQPSRGHDRLDLPVTVHSLPRPFEDRERQELGSPEERLQDSSDPDTGSEEEGSNRLSPPHSPRDFTRMQDIPEETESRDGEPTASES
SIO_010081: Arhgef2
subclass of: SO_0000673
so part of: Arhgef2
location: complement(join(24142..24215,24814..24997,26002..26445,26624..26674,26884..26919,27056..27123,27224..27340,27663..27863,29821..29888,31302..31471,32450..32526,34525..34773,34900..35017,35696..35821,36473..36723,37291..37437,37582..37691,37870..37999,38972..39035,39280..39347,41340..41484,57623..57716,58759..58801,59517..59589,67242..67371,69321..69604,83118..83222))
location: region:24142-83222:-1
so has part: feature:83118-83222:-1:exon
so has part: feature:69321-69604:-1:exon
so has part: feature:67242-67371:-1:exon
so has part: feature:59517-59589:-1:exon
so has part: feature:58759-58801:-1:exon
so has part: feature:57623-57716:-1:exon
so has part: feature:41340-41484:-1:exon
so has part: feature:39280-39347:-1:exon
so has part: feature:38972-39035:-1:exon
so has part: feature:37870-37999:-1:exon
so has part: feature:37582-37691:-1:exon
so has part: feature:37291-37437:-1:exon
so has part: feature:36473-36723:-1:exon
so has part: feature:35696-35821:-1:exon
so has part: feature:34900-35017:-1:exon
so has part: feature:34525-34773:-1:exon
so has part: feature:32450-32526:-1:exon
so has part: feature:31302-31471:-1:exon
so has part: feature:29821-29888:-1:exon
so has part: feature:27663-27863:-1:exon
so has part: feature:27224-27340:-1:exon
so has part: feature:27056-27123:-1:exon
so has part: feature:26884-26919:-1:exon
so has part: feature:26624-26674:-1:exon
so has part: feature:26002-26445:-1:exon
so has part: feature:24814-24997:-1:exon
so has part: feature:24142-24215:-1:exon

XP_026639824.1
type: Protein
SIO_000068: ncbiprotein

position:24142:-1
position: 24142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83222:-1
position: 83222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83118-83222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69321-69604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67242-67371:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59517-59589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58759-58801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57623-57716:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41340-41484:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39280-39347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38972-39035:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:37870-37999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37582-37691:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:37291-37437:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36473-36723:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35696-35821:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:34900-35017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:34525-34773:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:32450-32526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:31302-31471:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:29821-29888:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27663-27863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:27224-27340:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:27056-27123:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:26884-26919:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:26624-26674:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:26002-26445:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:24814-24997:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:24142-24215:-1:exon

Arhgef2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 2 isoform X2
translation: MSRIESLTRARIDRSKELATKTREKEKMKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTTRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNMRNRTLSVESLIDEGAEVIYNELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALCPGSTRNFVIHRLGDLLISQFSGSSAEQMRKTYSEFCSRHTKALKLYKELYARDKRFQQFIRKVTRSAVLKRHGVQECILLVTQRITKYPVLINRILQHSHGIEEECQDLTAALGLVKELLSNVDQDVHELEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLLWKTAAGRFKDVLLLLMTDVLVFLQEKDQKYIFPALDKPSVVSLQNLIVRDIANQAKGMFLISAGPPEMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETEDEAYLRRIKMELQQKDRALVELLQEKVGLFAEMTHFQADEDSVSGMPLPTLPRGLFRSESLESPRGERLLRDAIREVEGLKDLLVGPGADLLLTPREPALPLEPDSGNTSPGVTANGEARTFNGSIELCRADSDASQKDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERWEKLSRANSRDGEAGRAVVAPAAPEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEARRQLAALGQNEPLPAEAPWARRPLDPRRRSLPAGDALYLSFNPPQPSRGHDRLDLPVTVHSLPRPFEDRERQELGSPEERLQDSSDPDTGSEEEGSNRLSPPHSPRDFTRMQDIPEETESRDGEPTASES
SIO_010081: Arhgef2
subclass of: SO_0000673
so part of: Arhgef2
location: complement(join(24142..24215,24814..24997,26002..26445,26624..26674,26884..26919,27056..27123,27224..27340,27663..27863,29821..29888,31302..31471,32450..32526,34525..34773,34900..35017,35696..35821,36473..36723,37291..37437,37582..37691,37870..37999,38972..39035,39280..39347,41340..41484,52877..52939))
location: region:24142-52939:-1
so has part: feature:52877-52939:-1:exon
so has part: feature:41340-41484:-1:exon
so has part: feature:39280-39347:-1:exon
so has part: feature:38972-39035:-1:exon
so has part: feature:37870-37999:-1:exon
so has part: feature:37582-37691:-1:exon
so has part: feature:37291-37437:-1:exon
so has part: feature:36473-36723:-1:exon
so has part: feature:35696-35821:-1:exon
so has part: feature:34900-35017:-1:exon
so has part: feature:34525-34773:-1:exon
so has part: feature:32450-32526:-1:exon
so has part: feature:31302-31471:-1:exon
so has part: feature:29821-29888:-1:exon
so has part: feature:27663-27863:-1:exon
so has part: feature:27224-27340:-1:exon
so has part: feature:27056-27123:-1:exon
so has part: feature:26884-26919:-1:exon
so has part: feature:26624-26674:-1:exon
so has part: feature:26002-26445:-1:exon
so has part: feature:24814-24997:-1:exon
so has part: feature:24142-24215:-1:exon

XP_026639825.1
type: Protein
SIO_000068: ncbiprotein

position:52939:-1
position: 52939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52877-52939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41340-41484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39280-39347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38972-39035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37870-37999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37582-37691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37291-37437:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:36473-36723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35696-35821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34900-35017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:34525-34773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:32450-32526:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:31302-31471:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29821-29888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27663-27863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27224-27340:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:27056-27123:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26884-26919:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26624-26674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26002-26445:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:24814-24997:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:24142-24215:-1:exon

Arhgef2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 2 isoform X3
translation: MSGNRRQPSRRGQTREKEKMKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTTRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNMRNRTLSVESLIDEGAEVIYNELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALCPGSTRNFVIHRLGDLLISQFSGSSAEQMRKTYSEFCSRHTKALKLYKELYARDKRFQQFIRKVTRSAVLKRHGVQECILLVTQRITKYPVLINRILQHSHGIEEECQDLTAALGLVKELLSNVDQDVHELEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLLWKTAAGRFKDVLLLLMTDVLVFLQEKDQKYIFPALDKPSVVSLQNLIVRDIANQAKGMFLISAGPPEMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETEDEAYLRRIKMELQQKDRALVELLQEKVGLFAEMTHFQADEDSVSGMPLPTLPRGLFRSESLESPRGERLLRDAIREVEGLKDLLVGPGADLLLTPREPALPLEPDSGNTSPGVTANGEARTFNGSIELCRADSDASQKDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERWEKLSRANSRDGEAGRAVVAPAAPEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEARRQLAALGQNEPLPAEAPWARRPLDPRRRSLPAGDALYLSFNPPQPSRGHDRLDLPVTVHSLPRPFEDRERQELGSPEERLQDSSDPDTGSEEEGSNRLSPPHSPRDFTRMQDIPEETESRDGEPTASES
SIO_010081: Arhgef2
subclass of: SO_0000673
so part of: Arhgef2
location: complement(join(24142..24215,24814..24997,26002..26445,26624..26674,26884..26919,27056..27123,27224..27340,27663..27863,29821..29888,31302..31471,32450..32526,34525..34773,34900..35017,35696..35821,36473..36723,37291..37437,37582..37691,37870..37999,38972..39035,39280..39347,41340..41484,41657..41695))
location: region:24142-41695:-1
so has part: feature:41657-41695:-1:exon
so has part: feature:41340-41484:-1:exon
so has part: feature:39280-39347:-1:exon
so has part: feature:38972-39035:-1:exon
so has part: feature:37870-37999:-1:exon
so has part: feature:37582-37691:-1:exon
so has part: feature:37291-37437:-1:exon
so has part: feature:36473-36723:-1:exon
so has part: feature:35696-35821:-1:exon
so has part: feature:34900-35017:-1:exon
so has part: feature:34525-34773:-1:exon
so has part: feature:32450-32526:-1:exon
so has part: feature:31302-31471:-1:exon
so has part: feature:29821-29888:-1:exon
so has part: feature:27663-27863:-1:exon
so has part: feature:27224-27340:-1:exon
so has part: feature:27056-27123:-1:exon
so has part: feature:26884-26919:-1:exon
so has part: feature:26624-26674:-1:exon
so has part: feature:26002-26445:-1:exon
so has part: feature:24814-24997:-1:exon
so has part: feature:24142-24215:-1:exon

XP_013205280.1
type: Protein
SIO_000068: ncbiprotein

position:41695:-1
position: 41695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41657-41695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41340-41484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39280-39347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38972-39035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37870-37999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37582-37691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37291-37437:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:36473-36723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35696-35821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34900-35017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:34525-34773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:32450-32526:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:31302-31471:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29821-29888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27663-27863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27224-27340:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:27056-27123:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26884-26919:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26624-26674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26002-26445:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:24814-24997:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:24142-24215:-1:exon

Arhgef2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 2 isoform X4
translation: MKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTTRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNMRNRTLSVESLIDEGAEVIYNELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALCPGSTRNFVIHRLGDLLISQFSGSSAEQMRKTYSEFCSRHTKALKLYKELYARDKRFQQFIRKVTRSAVLKRHGVQECILLVTQRITKYPVLINRILQHSHGIEEECQDLTAALGLVKELLSNVDQDVHELEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLLWKTAAGRFKDVLLLLMTDVLVFLQEKDQKYIFPALDKPSVVSLQNLIVRDIANQAKGMFLISAGPPEMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETEDEAYLRRIKMELQQKDRALVELLQEKVGLFAEMTHFQADEDSVSGMPLPTLPRGLFRSESLESPRGERLLRDAIREVEGLKDLLVGPGADLLLTPREPALPLEPDSGNTSPGVTANGEARTFNGSIELCRADSDASQKDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERWEKLSRANSRDGEAGRAVVAPAAPEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEARRQLAALGQNEPLPAEAPWARRPLDPRRRSLPAGDALYLSFNPPQPSRGHDRLDLPVTVHSLPRPFEDRERQELGSPEERLQDSSDPDTGSEEEGSNRLSPPHSPRDFTRMQDIPEETESRDGEPTASES
SIO_010081: Arhgef2
subclass of: SO_0000673
so part of: Arhgef2
location: complement(join(24142..24215,24814..24997,26002..26445,26624..26674,26884..26919,27056..27123,27224..27340,27663..27863,29821..29888,31302..31471,32450..32526,34525..34773,34900..35017,35696..35821,36473..36723,37291..37437,37582..37691,37870..37999,38972..39035,39280..39347,41340..41466))
location: region:24142-41466:-1
so has part: feature:41340-41466:-1:exon
so has part: feature:39280-39347:-1:exon
so has part: feature:38972-39035:-1:exon
so has part: feature:37870-37999:-1:exon
so has part: feature:37582-37691:-1:exon
so has part: feature:37291-37437:-1:exon
so has part: feature:36473-36723:-1:exon
so has part: feature:35696-35821:-1:exon
so has part: feature:34900-35017:-1:exon
so has part: feature:34525-34773:-1:exon
so has part: feature:32450-32526:-1:exon
so has part: feature:31302-31471:-1:exon
so has part: feature:29821-29888:-1:exon
so has part: feature:27663-27863:-1:exon
so has part: feature:27224-27340:-1:exon
so has part: feature:27056-27123:-1:exon
so has part: feature:26884-26919:-1:exon
so has part: feature:26624-26674:-1:exon
so has part: feature:26002-26445:-1:exon
so has part: feature:24814-24997:-1:exon
so has part: feature:24142-24215:-1:exon

XP_026639826.1
type: Protein
SIO_000068: ncbiprotein

position:41466:-1
position: 41466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41340-41466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39280-39347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38972-39035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37870-37999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37582-37691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37291-37437:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36473-36723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:35696-35821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34900-35017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34525-34773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:32450-32526:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:31302-31471:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:29821-29888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27663-27863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27224-27340:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27056-27123:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26884-26919:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26624-26674:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26002-26445:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:24814-24997:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:24142-24215:-1:exon

Arhgef2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 2 isoform X4
translation: MKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTTRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNMRNRTLSVESLIDEGAEVIYNELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALCPGSTRNFVIHRLGDLLISQFSGSSAEQMRKTYSEFCSRHTKALKLYKELYARDKRFQQFIRKVTRSAVLKRHGVQECILLVTQRITKYPVLINRILQHSHGIEEECQDLTAALGLVKELLSNVDQDVHELEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLLWKTAAGRFKDVLLLLMTDVLVFLQEKDQKYIFPALDKPSVVSLQNLIVRDIANQAKGMFLISAGPPEMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETEDEAYLRRIKMELQQKDRALVELLQEKVGLFAEMTHFQADEDSVSGMPLPTLPRGLFRSESLESPRGERLLRDAIREVEGLKDLLVGPGADLLLTPREPALPLEPDSGNTSPGVTANGEARTFNGSIELCRADSDASQKDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERWEKLSRANSRDGEAGRAVVAPAAPEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEARRQLAALGQNEPLPAEAPWARRPLDPRRRSLPAGDALYLSFNPPQPSRGHDRLDLPVTVHSLPRPFEDRERQELGSPEERLQDSSDPDTGSEEEGSNRLSPPHSPRDFTRMQDIPEETESRDGEPTASES
SIO_010081: Arhgef2
subclass of: SO_0000673
so part of: Arhgef2
location: complement(join(24142..24215,24814..24997,26002..26445,26624..26674,26884..26919,27056..27123,27224..27340,27663..27863,29821..29888,31302..31471,32450..32526,34525..34773,34900..35017,35696..35821,36473..36723,37291..37437,37582..37691,37870..37999,38972..39035,39280..39347,41340..41466))
location: region:24142-41466:-1
so has part: feature:41340-41466:-1:exon
so has part: feature:39280-39347:-1:exon
so has part: feature:38972-39035:-1:exon
so has part: feature:37870-37999:-1:exon
so has part: feature:37582-37691:-1:exon
so has part: feature:37291-37437:-1:exon
so has part: feature:36473-36723:-1:exon
so has part: feature:35696-35821:-1:exon
so has part: feature:34900-35017:-1:exon
so has part: feature:34525-34773:-1:exon
so has part: feature:32450-32526:-1:exon
so has part: feature:31302-31471:-1:exon
so has part: feature:29821-29888:-1:exon
so has part: feature:27663-27863:-1:exon
so has part: feature:27224-27340:-1:exon
so has part: feature:27056-27123:-1:exon
so has part: feature:26884-26919:-1:exon
so has part: feature:26624-26674:-1:exon
so has part: feature:26002-26445:-1:exon
so has part: feature:24814-24997:-1:exon
so has part: feature:24142-24215:-1:exon

XP_026639827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41340-41466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39280-39347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38972-39035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37870-37999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37582-37691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37291-37437:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36473-36723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:35696-35821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34900-35017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34525-34773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:32450-32526:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:31302-31471:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:29821-29888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27663-27863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27224-27340:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27056-27123:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26884-26919:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26624-26674:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26002-26445:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:24814-24997:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:24142-24215:-1:exon

Arhgef2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 2 isoform X4
translation: MKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTTRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNMRNRTLSVESLIDEGAEVIYNELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALCPGSTRNFVIHRLGDLLISQFSGSSAEQMRKTYSEFCSRHTKALKLYKELYARDKRFQQFIRKVTRSAVLKRHGVQECILLVTQRITKYPVLINRILQHSHGIEEECQDLTAALGLVKELLSNVDQDVHELEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLLWKTAAGRFKDVLLLLMTDVLVFLQEKDQKYIFPALDKPSVVSLQNLIVRDIANQAKGMFLISAGPPEMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETEDEAYLRRIKMELQQKDRALVELLQEKVGLFAEMTHFQADEDSVSGMPLPTLPRGLFRSESLESPRGERLLRDAIREVEGLKDLLVGPGADLLLTPREPALPLEPDSGNTSPGVTANGEARTFNGSIELCRADSDASQKDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERWEKLSRANSRDGEAGRAVVAPAAPEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEARRQLAALGQNEPLPAEAPWARRPLDPRRRSLPAGDALYLSFNPPQPSRGHDRLDLPVTVHSLPRPFEDRERQELGSPEERLQDSSDPDTGSEEEGSNRLSPPHSPRDFTRMQDIPEETESRDGEPTASES
SIO_010081: Arhgef2
subclass of: SO_0000673
so part of: Arhgef2
location: complement(join(24142..24215,24814..24997,26002..26445,26624..26674,26884..26919,27056..27123,27224..27340,27663..27863,29821..29888,31302..31471,32450..32526,34525..34773,34900..35017,35696..35821,36473..36723,37291..37437,37582..37691,37870..37999,38972..39035,39280..39347,41340..41466))
location: region:24142-41466:-1
so has part: feature:41340-41466:-1:exon
so has part: feature:39280-39347:-1:exon
so has part: feature:38972-39035:-1:exon
so has part: feature:37870-37999:-1:exon
so has part: feature:37582-37691:-1:exon
so has part: feature:37291-37437:-1:exon
so has part: feature:36473-36723:-1:exon
so has part: feature:35696-35821:-1:exon
so has part: feature:34900-35017:-1:exon
so has part: feature:34525-34773:-1:exon
so has part: feature:32450-32526:-1:exon
so has part: feature:31302-31471:-1:exon
so has part: feature:29821-29888:-1:exon
so has part: feature:27663-27863:-1:exon
so has part: feature:27224-27340:-1:exon
so has part: feature:27056-27123:-1:exon
so has part: feature:26884-26919:-1:exon
so has part: feature:26624-26674:-1:exon
so has part: feature:26002-26445:-1:exon
so has part: feature:24814-24997:-1:exon
so has part: feature:24142-24215:-1:exon

XP_013205282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41340-41466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39280-39347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38972-39035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37870-37999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37582-37691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37291-37437:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36473-36723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:35696-35821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34900-35017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34525-34773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:32450-32526:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:31302-31471:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:29821-29888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27663-27863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27224-27340:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27056-27123:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26884-26919:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26624-26674:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26002-26445:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:24814-24997:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:24142-24215:-1:exon

Ssr2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ssr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84776..92020)
location: region:84776-92020:-1
so has part: feature:84776-92020:-1:exon
subclass of: SO_0000010

101980729
type: Gene
SIO_000068: ncbigene

position:84776:-1
position: 84776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92020:-1
position: 92020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84776-92020:-1:exon

Ssr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ssr2
product: signal sequence receptor subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_005356857.2
SIO_010081: Ssr2
subclass of: SO_0000673
so part of: Ssr2
location: complement(join(84776..85307,87069..87146,89782..89890,90920..91018,91582..91736,91948..92020))
location: region:84776-92020:-1
so has part: feature:91948-92020:-1:exon
so has part: feature:91582-91736:-1:exon
so has part: feature:90920-91018:-1:exon
so has part: feature:89782-89890:-1:exon
so has part: feature:87069-87146:-1:exon
so has part: feature:84776-85307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91948-92020:-1:exon

position:91948:-1
position: 91948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91582-91736:-1:exon

position:91582:-1
position: 91582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91736:-1
position: 91736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90920-91018:-1:exon

position:90920:-1
position: 90920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91018:-1
position: 91018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89782-89890:-1:exon

position:89782:-1
position: 89782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89890:-1
position: 89890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:87069-87146:-1:exon

position:87069:-1
position: 87069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87146:-1
position: 87146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84776-85307:-1:exon

position:85307:-1
position: 85307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ssr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ssr2
product: signal sequence receptor subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_026784219.1
SIO_010081: Ssr2
subclass of: SO_0000673
so part of: Ssr2
location: complement(join(84776..85307,87056..87146,89782..89890,90920..91018,91582..91736,91948..92020))
location: region:84776-92020:-1
so has part: feature:91948-92020:-1:exon
so has part: feature:91582-91736:-1:exon
so has part: feature:90920-91018:-1:exon
so has part: feature:89782-89890:-1:exon
so has part: feature:87056-87146:-1:exon
so has part: feature:84776-85307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91948-92020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91582-91736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90920-91018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89782-89890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87056-87146:-1:exon

position:87056:-1
position: 87056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84776-85307:-1:exon

Ssr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ssr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta isoform X1
translation: MLTLFSGCLWPRMAFGVPTMRPLAFVVLALLAVSQGEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFVSLSAGLGSLWSHDLALHRHPPSPVVLQQEEIRYSQTQEELSAASSTLLSRSQVFSRLHRVADVFPWPVAILSWILTQPECRGQTWELASLPVLTEAIKQYCL
SIO_010081: Ssr2
subclass of: SO_0000673
so part of: Ssr2
location: complement(join(85009..85307,87056..87146,89782..89890,90920..91018,91582..91736,91948..92004))
location: region:85009-92004:-1
so has part: feature:91948-92004:-1:exon
so has part: feature:91582-91736:-1:exon
so has part: feature:90920-91018:-1:exon
so has part: feature:89782-89890:-1:exon
so has part: feature:87056-87146:-1:exon
so has part: feature:85009-85307:-1:exon

XP_026640020.1
type: Protein
SIO_000068: ncbiprotein

position:85009:-1
position: 85009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92004:-1
position: 92004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91948-92004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91582-91736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90920-91018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89782-89890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87056-87146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85009-85307:-1:exon

Ssr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ssr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta isoform X2
translation: MLTLFSGCLWPRMAFGVPTMRPLAFVVLALLAVSQGEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKPKKN
SIO_010081: Ssr2
subclass of: SO_0000673
so part of: Ssr2
location: complement(join(85197..85307,87069..87146,89782..89890,90920..91018,91582..91736,91948..92004))
location: region:85197-92004:-1
so has part: feature:91948-92004:-1:exon
so has part: feature:91582-91736:-1:exon
so has part: feature:90920-91018:-1:exon
so has part: feature:89782-89890:-1:exon
so has part: feature:87069-87146:-1:exon
so has part: feature:85197-85307:-1:exon

XP_005356914.1
type: Protein
SIO_000068: ncbiprotein

position:85197:-1
position: 85197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91948-92004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91582-91736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90920-91018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89782-89890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87069-87146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85197-85307:-1:exon

Ubqln4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ubqln4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(105885..125160)
location: region:105885-125160:-1
so has part: feature:105885-125160:-1:exon
subclass of: SO_0000010

101981011
type: Gene
SIO_000068: ncbigene

position:105885:-1
position: 105885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125160:-1
position: 125160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105885-125160:-1:exon

Ubqln4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ubqln4
product: ubiquilin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005356858.3
SIO_010081: Ubqln4
subclass of: SO_0000673
so part of: Ubqln4
location: complement(join(105885..107532,108740..108923,109253..109368,109457..109540,109929..110068,111059..111284,114737..114895,122212..122474,122856..123055,123370..123521,125047..125160))
location: region:105885-125160:-1
so has part: feature:125047-125160:-1:exon
so has part: feature:123370-123521:-1:exon
so has part: feature:122856-123055:-1:exon
so has part: feature:122212-122474:-1:exon
so has part: feature:114737-114895:-1:exon
so has part: feature:111059-111284:-1:exon
so has part: feature:109929-110068:-1:exon
so has part: feature:109457-109540:-1:exon
so has part: feature:109253-109368:-1:exon
so has part: feature:108740-108923:-1:exon
so has part: feature:105885-107532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125047-125160:-1:exon

position:125047:-1
position: 125047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123370-123521:-1:exon

position:123370:-1
position: 123370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123521:-1
position: 123521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:122856-123055:-1:exon

position:122856:-1
position: 122856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123055:-1
position: 123055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122212-122474:-1:exon

position:122212:-1
position: 122212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122474:-1
position: 122474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114737-114895:-1:exon

position:114737:-1
position: 114737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114895:-1
position: 114895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111059-111284:-1:exon

position:111059:-1
position: 111059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111284:-1
position: 111284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:109929-110068:-1:exon

position:109929:-1
position: 109929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110068:-1
position: 110068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:109457-109540:-1:exon

position:109457:-1
position: 109457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109540:-1
position: 109540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109253-109368:-1:exon

position:109253:-1
position: 109253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109368:-1
position: 109368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:108740-108923:-1:exon

position:108740:-1
position: 108740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108923:-1
position: 108923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:105885-107532:-1:exon

position:107532:-1
position: 107532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ubqln4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ubqln4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X1
translation: MAEPTGAETRPQIRVTVKTPKDKEEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPVATPASPPSTPDSASAPSTTPASPAAPTQPCGSGNATSDSGNGGGPSPVAAEGPPSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLTQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMLTAAREQFGNNPFSSLAGNSDSTSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGVFNSPEMQALLQQVSENPQLMQNVISAPYMRSMMQTLSQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGTSRTPVPLAGNSGSAAEASTPSPGLPGTPPPTADSSAQQQLMQQMIQLLSGSGNSQVPMPEARFQQQLEQLNSMGFVNREANLQALIATGGDINAAIERLLGSQLS
SIO_010081: Ubqln4
subclass of: SO_0000673
so part of: Ubqln4
location: complement(join(107380..107532,108740..108923,109253..109368,109457..109540,109929..110068,111059..111284,114737..114895,122212..122474,122856..123055,123370..123521,125047..125154))
location: region:107380-125154:-1
so has part: feature:125047-125154:-1:exon
so has part: feature:123370-123521:-1:exon
so has part: feature:122856-123055:-1:exon
so has part: feature:122212-122474:-1:exon
so has part: feature:114737-114895:-1:exon
so has part: feature:111059-111284:-1:exon
so has part: feature:109929-110068:-1:exon
so has part: feature:109457-109540:-1:exon
so has part: feature:109253-109368:-1:exon
so has part: feature:108740-108923:-1:exon
so has part: feature:107380-107532:-1:exon

XP_005356915.1
type: Protein
SIO_000068: ncbiprotein

position:107380:-1
position: 107380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125154:-1
position: 125154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125047-125154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123370-123521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122856-123055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122212-122474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114737-114895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111059-111284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109929-110068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109457-109540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109253-109368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108740-108923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107380-107532:-1:exon

Ubqln4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ubqln4
product: ubiquilin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026784068.1
SIO_010081: Ubqln4
subclass of: SO_0000673
so part of: Ubqln4
location: complement(join(107640..107698,108740..108923,109253..109368,109457..109540,109929..110068,111059..111284,114737..114895,122212..122474,122856..123055,123370..123521,125047..125160))
location: region:107640-125160:-1
so has part: feature:125047-125160:-1:exon
so has part: feature:123370-123521:-1:exon
so has part: feature:122856-123055:-1:exon
so has part: feature:122212-122474:-1:exon
so has part: feature:114737-114895:-1:exon
so has part: feature:111059-111284:-1:exon
so has part: feature:109929-110068:-1:exon
so has part: feature:109457-109540:-1:exon
so has part: feature:109253-109368:-1:exon
so has part: feature:108740-108923:-1:exon
so has part: feature:107640-107698:-1:exon

position:107640:-1
position: 107640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125047-125160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123370-123521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122856-123055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122212-122474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114737-114895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111059-111284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109929-110068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109457-109540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109253-109368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108740-108923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107640-107698:-1:exon

position:107698:-1
position: 107698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ubqln4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ubqln4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X2
translation: MAEPTGAETRPQIRVTVKTPKDKEEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPVATPASPPSTPDSASAPSTTPASPAAPTQPCGSGNATSDSGNGGGPSPVAAEGPPSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLTQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMLTAAREQFGNNPFSSLAGNSDSTSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGVFNSPEMQALLQQVSENPQLMQNVISAPYMRSMMQTLSQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGTSRTPVPLAGNSGSAAEASTPSPGLPGTPPPTADSSAQQQLMQQMIQLLSGSGNSQETVLQAQHSGG
SIO_010081: Ubqln4
subclass of: SO_0000673
so part of: Ubqln4
location: complement(join(107663..107698,108740..108923,109253..109368,109457..109540,109929..110068,111059..111284,114737..114895,122212..122474,122856..123055,123370..123521,125047..125154))
location: region:107663-125154:-1
so has part: feature:125047-125154:-1:exon
so has part: feature:123370-123521:-1:exon
so has part: feature:122856-123055:-1:exon
so has part: feature:122212-122474:-1:exon
so has part: feature:114737-114895:-1:exon
so has part: feature:111059-111284:-1:exon
so has part: feature:109929-110068:-1:exon
so has part: feature:109457-109540:-1:exon
so has part: feature:109253-109368:-1:exon
so has part: feature:108740-108923:-1:exon
so has part: feature:107663-107698:-1:exon

XP_026639869.1
type: Protein
SIO_000068: ncbiprotein

position:107663:-1
position: 107663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125047-125154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123370-123521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122856-123055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122212-122474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114737-114895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111059-111284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109929-110068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109457-109540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109253-109368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108740-108923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107663-107698:-1:exon

Lamtor2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lamtor2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 125952..128456
location: region:125952-128456:1
so has part: feature:125952-128456:1:exon
subclass of: SO_0000010

101981303
type: Gene
SIO_000068: ncbigene

position:125952:1
position: 125952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128456:1
position: 128456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125952-128456:1:exon

Lamtor2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lamtor2
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_005356859.3
SIO_010081: Lamtor2
subclass of: SO_0000673
so part of: Lamtor2
location: join(125952..126103,126408..126570,128005..128094,128288..128456)
location: region:125952-128456:1
so has part: feature:125952-126103:1:exon
so has part: feature:126408-126570:1:exon
so has part: feature:128005-128094:1:exon
so has part: feature:128288-128456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125952-126103:1:exon

position:126103:1
position: 126103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126408-126570:1:exon

position:126408:1
position: 126408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126570:1
position: 126570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128005-128094:1:exon

position:128005:1
position: 128005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128094:1
position: 128094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128288-128456:1:exon

position:128288:1
position: 128288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lamtor2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lamtor2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR2
translation: MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDNLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGMLKAKAQALVQYLEDPLTQVAAS
SIO_010081: Lamtor2
subclass of: SO_0000673
so part of: Lamtor2
location: join(126036..126103,126408..126570,128005..128094,128288..128344)
location: region:126036-128344:1
so has part: feature:126036-126103:1:exon
so has part: feature:126408-126570:1:exon
so has part: feature:128005-128094:1:exon
so has part: feature:128288-128344:1:exon

XP_005356916.1
type: Protein
SIO_000068: ncbiprotein

position:126036:1
position: 126036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128344:1
position: 128344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126036-126103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126408-126570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128005-128094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128288-128344:1:exon

Rab25
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rab25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 129928..137080
location: region:129928-137080:1
so has part: feature:129928-137080:1:exon
subclass of: SO_0000010

102000809
type: Gene
SIO_000068: ncbigene

position:129928:1
position: 129928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137080:1
position: 137080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129928-137080:1:exon

Rab25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rab25
product: RAB25, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356928.2
SIO_010081: Rab25
subclass of: SO_0000673
so part of: Rab25
location: join(129928..129967,133771..133966,135699..135892,136554..136634,136953..137080)
location: region:129928-137080:1
so has part: feature:129928-129967:1:exon
so has part: feature:133771-133966:1:exon
so has part: feature:135699-135892:1:exon
so has part: feature:136554-136634:1:exon
so has part: feature:136953-137080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129928-129967:1:exon

position:129967:1
position: 129967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133771-133966:1:exon

position:133771:1
position: 133771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133966:1
position: 133966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135699-135892:1:exon

position:135699:1
position: 135699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135892:1
position: 135892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136554-136634:1:exon

position:136554:1
position: 136554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136634:1
position: 136634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136953-137080:1:exon

position:136953:1
position: 136953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rab25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rab25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25
translation: MTGKDDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTSAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRANAITLGNAQTEQDSGPGEKKACCINL
SIO_010081: Rab25
subclass of: SO_0000673
so part of: Rab25
location: join(129928..129967,133771..133966,135699..135892,136554..136634,136953..137080)
location: region:129928-137080:1
so has part: feature:129928-129967:1:exon
so has part: feature:133771-133966:1:exon
so has part: feature:135699-135892:1:exon
so has part: feature:136554-136634:1:exon
so has part: feature:136953-137080:1:exon

XP_005356985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129928-129967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133771-133966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135699-135892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136554-136634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136953-137080:1:exon

Mex3a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mex3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141741..146830)
location: region:141741-146830:-1
so has part: feature:141741-146830:-1:exon
subclass of: SO_0000010

102001091
type: Gene
SIO_000068: ncbigene

position:141741:-1
position: 141741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146830:-1
position: 146830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141741-146830:-1:exon

Mex3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mex3a
product: mex-3 RNA binding family member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783874.1
SIO_010081: Mex3a
subclass of: SO_0000673
so part of: Mex3a
location: complement(join(141741..143303,146254..146540,146588..146830))
location: region:141741-146830:-1
so has part: feature:146588-146830:-1:exon
so has part: feature:146254-146540:-1:exon
so has part: feature:141741-143303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146588-146830:-1:exon

position:146588:-1
position: 146588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146254-146540:-1:exon

position:146254:-1
position: 146254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146540:-1
position: 146540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141741-143303:-1:exon

position:143303:-1
position: 143303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mex3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mex3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3A
translation: MPSLVVSGIMERNGGFGELGCFGGSAKDRGLLEDERALQLALDQLCLLGLGEPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQPPAAPKGANDAKLCALYKEAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVATARREIISAAEHFSMIRASRNKSGAAFGVAPALPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNSDGDFLAGSPDTALDSRYSDAWRVHAPGCKPLSTFRQNSLGCIGECSVDSAFEAPRLGEQGGDFGYGGGYLFPGYGVGKQDVYYGVAETSPPLWAGQENATPTSVLFSASSSSSAKARAGPPGAHRSPATSAGPEQLAGLPRRPPGEPLQGFSKLGAGGLRSPGGGRDCMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRIFS
SIO_010081: Mex3a
subclass of: SO_0000673
so part of: Mex3a
location: complement(join(142198..143303,146254..146540,146588..146754))
location: region:142198-146754:-1
so has part: feature:146588-146754:-1:exon
so has part: feature:146254-146540:-1:exon
so has part: feature:142198-143303:-1:exon

XP_026639675.1
type: Protein
SIO_000068: ncbiprotein

position:142198:-1
position: 142198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146754:-1
position: 146754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146588-146754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146254-146540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142198-143303:-1:exon

Lmna
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lmna
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147303..195534
location: region:147303-195534:1
so has part: feature:147303-195534:1:exon
subclass of: SO_0000010

101982208
type: Gene
SIO_000068: ncbigene

position:147303:1
position: 147303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195534:1
position: 195534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147303-195534:1:exon

Lmna
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lmna
product: lamin A/C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026784066.1
SIO_010081: Lmna
subclass of: SO_0000673
so part of: Lmna
location: join(147303..147485,147734..147771,148158..148247,175452..176250,188465..188621,189748..189873,189971..190141,190294..190419,191873..192093,192182..192404,193489..193596,193692..193811,194179..194268,194937..195203,195439..195534)
location: region:147303-195534:1
so has part: feature:147303-147485:1:exon
so has part: feature:147734-147771:1:exon
so has part: feature:148158-148247:1:exon
so has part: feature:175452-176250:1:exon
so has part: feature:188465-188621:1:exon
so has part: feature:189748-189873:1:exon
so has part: feature:189971-190141:1:exon
so has part: feature:190294-190419:1:exon
so has part: feature:191873-192093:1:exon
so has part: feature:192182-192404:1:exon
so has part: feature:193489-193596:1:exon
so has part: feature:193692-193811:1:exon
so has part: feature:194179-194268:1:exon
so has part: feature:194937-195203:1:exon
so has part: feature:195439-195534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147303-147485:1:exon

position:147485:1
position: 147485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147734-147771:1:exon

position:147734:1
position: 147734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147771:1
position: 147771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148158-148247:1:exon

position:148158:1
position: 148158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148247:1
position: 148247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:175452-176250:1:exon

position:175452:1
position: 175452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176250:1
position: 176250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188465-188621:1:exon

position:188465:1
position: 188465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188621:1
position: 188621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:189748-189873:1:exon

position:189748:1
position: 189748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189873:1
position: 189873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189971-190141:1:exon

position:189971:1
position: 189971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190141:1
position: 190141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:190294-190419:1:exon

position:190294:1
position: 190294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190419:1
position: 190419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:191873-192093:1:exon

position:191873:1
position: 191873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192093:1
position: 192093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:192182-192404:1:exon

position:192182:1
position: 192182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192404:1
position: 192404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:193489-193596:1:exon

position:193489:1
position: 193489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193596:1
position: 193596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193692-193811:1:exon

position:193692:1
position: 193692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193811:1
position: 193811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:194179-194268:1:exon

position:194179:1
position: 194179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194268:1
position: 194268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:194937-195203:1:exon

position:194937:1
position: 194937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195203:1
position: 195203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:195439-195534:1:exon

position:195439:1
position: 195439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lmna
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lmna
product: lamin A/C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026784067.1
SIO_010081: Lmna
subclass of: SO_0000673
so part of: Lmna
location: join(147303..147485,148158..148247,175452..176250,188465..188621,189748..189873,189971..190141,190294..190419,191873..192093,192182..192404,193489..193596,193692..193811,194179..194268,194937..195203,195439..195534)
location: region:147303-195534:1
so has part: feature:147303-147485:1:exon
so has part: feature:148158-148247:1:exon
so has part: feature:175452-176250:1:exon
so has part: feature:188465-188621:1:exon
so has part: feature:189748-189873:1:exon
so has part: feature:189971-190141:1:exon
so has part: feature:190294-190419:1:exon
so has part: feature:191873-192093:1:exon
so has part: feature:192182-192404:1:exon
so has part: feature:193489-193596:1:exon
so has part: feature:193692-193811:1:exon
so has part: feature:194179-194268:1:exon
so has part: feature:194937-195203:1:exon
so has part: feature:195439-195534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147303-147485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148158-148247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175452-176250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188465-188621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189748-189873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189971-190141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190294-190419:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191873-192093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192182-192404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193489-193596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193692-193811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194179-194268:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194937-195203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:195439-195534:1:exon

Lmna
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lmna
product: lamin A/C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005356861.2
SIO_010081: Lmna
subclass of: SO_0000673
so part of: Lmna
location: join(147534..147771,148158..148247,175452..176250,188465..188621,189748..189873,189971..190141,190294..190419,191873..192093,192182..192404,193489..193596,193692..193811,194179..194268,194937..195203,195439..195534)
location: region:147534-195534:1
so has part: feature:147534-147771:1:exon
so has part: feature:148158-148247:1:exon
so has part: feature:175452-176250:1:exon
so has part: feature:188465-188621:1:exon
so has part: feature:189748-189873:1:exon
so has part: feature:189971-190141:1:exon
so has part: feature:190294-190419:1:exon
so has part: feature:191873-192093:1:exon
so has part: feature:192182-192404:1:exon
so has part: feature:193489-193596:1:exon
so has part: feature:193692-193811:1:exon
so has part: feature:194179-194268:1:exon
so has part: feature:194937-195203:1:exon
so has part: feature:195439-195534:1:exon

position:147534:1
position: 147534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147534-147771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148158-148247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175452-176250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188465-188621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189748-189873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189971-190141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190294-190419:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191873-192093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192182-192404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193489-193596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193692-193811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194179-194268:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194937-195203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:195439-195534:1:exon

Lmna
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lmna
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin
translation: METPSQRRATRSGAQSSSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLLAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRTSSHSSQSQGGGSVTKKRKLESSESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSVTVVEDDEDEDGDDLLHHHHGSHCSSSGDPAEYNLRSRTVLCGTCGQPADKAAGGSGAQVGGSISSGSSASSVTVTRSYRSVGGSGGGSFGDSLVTRSYLLGNSRPRTQSPQNCSIM
SIO_010081: Lmna
subclass of: SO_0000673
so part of: Lmna
location: join(175895..176250,188465..188621,189748..189873,189971..190141,190294..190419,191873..192093,192182..192404,193489..193596,193692..193811,194179..194268,194937..195203,195439..195465)
location: region:175895-195465:1
so has part: feature:175895-176250:1:exon
so has part: feature:188465-188621:1:exon
so has part: feature:189748-189873:1:exon
so has part: feature:189971-190141:1:exon
so has part: feature:190294-190419:1:exon
so has part: feature:191873-192093:1:exon
so has part: feature:192182-192404:1:exon
so has part: feature:193489-193596:1:exon
so has part: feature:193692-193811:1:exon
so has part: feature:194179-194268:1:exon
so has part: feature:194937-195203:1:exon
so has part: feature:195439-195465:1:exon

XP_026639867.1
type: Protein
SIO_000068: ncbiprotein

position:175895:1
position: 175895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195465:1
position: 195465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175895-176250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188465-188621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189748-189873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189971-190141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190294-190419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191873-192093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192182-192404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193489-193596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193692-193811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194179-194268:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194937-195203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:195439-195465:1:exon

Lmna
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lmna
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin
translation: METPSQRRATRSGAQSSSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLLAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRTSSHSSQSQGGGSVTKKRKLESSESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSVTVVEDDEDEDGDDLLHHHHGSHCSSSGDPAEYNLRSRTVLCGTCGQPADKAAGGSGAQVGGSISSGSSASSVTVTRSYRSVGGSGGGSFGDSLVTRSYLLGNSRPRTQSPQNCSIM
SIO_010081: Lmna
subclass of: SO_0000673
so part of: Lmna
location: join(175895..176250,188465..188621,189748..189873,189971..190141,190294..190419,191873..192093,192182..192404,193489..193596,193692..193811,194179..194268,194937..195203,195439..195465)
location: region:175895-195465:1
so has part: feature:175895-176250:1:exon
so has part: feature:188465-188621:1:exon
so has part: feature:189748-189873:1:exon
so has part: feature:189971-190141:1:exon
so has part: feature:190294-190419:1:exon
so has part: feature:191873-192093:1:exon
so has part: feature:192182-192404:1:exon
so has part: feature:193489-193596:1:exon
so has part: feature:193692-193811:1:exon
so has part: feature:194179-194268:1:exon
so has part: feature:194937-195203:1:exon
so has part: feature:195439-195465:1:exon

XP_026639868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175895-176250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188465-188621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189748-189873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189971-190141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190294-190419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191873-192093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192182-192404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193489-193596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193692-193811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194179-194268:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194937-195203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:195439-195465:1:exon

Lmna
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lmna
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin
translation: METPSQRRATRSGAQSSSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLLAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRTSSHSSQSQGGGSVTKKRKLESSESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSVTVVEDDEDEDGDDLLHHHHGSHCSSSGDPAEYNLRSRTVLCGTCGQPADKAAGGSGAQVGGSISSGSSASSVTVTRSYRSVGGSGGGSFGDSLVTRSYLLGNSRPRTQSPQNCSIM
SIO_010081: Lmna
subclass of: SO_0000673
so part of: Lmna
location: join(175895..176250,188465..188621,189748..189873,189971..190141,190294..190419,191873..192093,192182..192404,193489..193596,193692..193811,194179..194268,194937..195203,195439..195465)
location: region:175895-195465:1
so has part: feature:175895-176250:1:exon
so has part: feature:188465-188621:1:exon
so has part: feature:189748-189873:1:exon
so has part: feature:189971-190141:1:exon
so has part: feature:190294-190419:1:exon
so has part: feature:191873-192093:1:exon
so has part: feature:192182-192404:1:exon
so has part: feature:193489-193596:1:exon
so has part: feature:193692-193811:1:exon
so has part: feature:194179-194268:1:exon
so has part: feature:194937-195203:1:exon
so has part: feature:195439-195465:1:exon

XP_005356918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175895-176250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188465-188621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189748-189873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189971-190141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190294-190419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191873-192093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192182-192404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193489-193596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193692-193811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194179-194268:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194937-195203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:195439-195465:1:exon

LOC101983263
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101983263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(203867..204260)
location: region:203867-204260:-1
so has part: feature:203867-204260:-1:exon
subclass of: SO_0000010

101983263
type: Gene
SIO_000068: ncbigene

position:203867:-1
position: 203867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204260:-1
position: 204260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203867-204260:-1:exon

LOC101983263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101983263
product: putative 60S ribosomal protein L37a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356866.2
SIO_010081: LOC101983263
subclass of: SO_0000673
so part of: LOC101983263
location: complement(203867..204260)
location: region:203867-204260:-1
so has part: feature:203867-204260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203867-204260:-1:exon

LOC101983263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101983263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative 60S ribosomal protein L37a
translation: MAKCTKKVGIVGKYGTRYGSSLQKMVKKIEISQHAKYMCSFCGKTKMKRRAVGIWHCGSRMKTVAGGAWTYNTTSAVTVKSAIRRPKELKDQQKCYHLIHKPTNYNSAQPTK
SIO_010081: LOC101983263
subclass of: SO_0000673
so part of: LOC101983263
location: complement(203897..204235)
location: region:203897-204235:-1
so has part: feature:203897-204235:-1:exon

XP_005356923.1
type: Protein
SIO_000068: ncbiprotein

position:203897:-1
position: 203897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204235:-1
position: 204235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203897-204235:-1:exon

Sema4a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sema4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 226928..252635
location: region:226928-252635:1
so has part: feature:226928-252635:1:exon
subclass of: SO_0000010

101983545
type: Gene
SIO_000068: ncbigene

position:226928:1
position: 226928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252635:1
position: 252635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226928-252635:1:exon

Sema4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sema4a
product: semaphorin 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026784053.1
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(226928..226966,227174..228724,232672..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..252635)
location: region:226928-252635:1
so has part: feature:226928-226966:1:exon
so has part: feature:227174-228724:1:exon
so has part: feature:232672-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-252635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226928-226966:1:exon

position:226966:1
position: 226966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227174-228724:1:exon

position:227174:1
position: 227174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228724:1
position: 228724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232672-232839:1:exon

position:232672:1
position: 232672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232839:1
position: 232839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234569-234729:1:exon

position:234569:1
position: 234569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234729:1
position: 234729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235577-235639:1:exon

position:235577:1
position: 235577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235639:1
position: 235639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:235820-235918:1:exon

position:235820:1
position: 235820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235918:1
position: 235918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:236124-236229:1:exon

position:236124:1
position: 236124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236229:1
position: 236229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:236879-236995:1:exon

position:236879:1
position: 236879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236995:1
position: 236995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:237359-237483:1:exon

position:237359:1
position: 237359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237483:1
position: 237483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:237602-237774:1:exon

position:237602:1
position: 237602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237774:1
position: 237774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:239795-239945:1:exon

position:239795:1
position: 239795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239945:1
position: 239945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:247430-247610:1:exon

position:247430:1
position: 247430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247610:1
position: 247610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:250155-250273:1:exon

position:250155:1
position: 250155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250273:1
position: 250273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:250380-250537:1:exon

position:250380:1
position: 250380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250537:1
position: 250537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:250790-250890:1:exon

position:250790:1
position: 250790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250890:1
position: 250890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:251390-252635:1:exon

position:251390:1
position: 251390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sema4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sema4a
product: semaphorin 4A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026784056.1
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(226946..226966,232672..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..252635)
location: region:226946-252635:1
so has part: feature:226946-226966:1:exon
so has part: feature:232672-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-252635:1:exon

position:226946:1
position: 226946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226946-226966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232672-232839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:251390-252635:1:exon

Sema4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sema4a
product: semaphorin 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005356869.3
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(228937..229030,232672..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..252635)
location: region:228937-252635:1
so has part: feature:228937-229030:1:exon
so has part: feature:232672-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-252635:1:exon

position:228937:1
position: 228937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228937-229030:1:exon

position:229030:1
position: 229030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232672-232839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:251390-252635:1:exon

Sema4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sema4a
product: semaphorin 4A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_013349830.2
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(228937..229030,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..252635)
location: region:228937-252635:1
so has part: feature:228937-229030:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-252635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228937-229030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251390-252635:1:exon

Sema4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sema4a
product: semaphorin 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026784054.1
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(229376..231063,232672..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..252635)
location: region:229376-252635:1
so has part: feature:229376-231063:1:exon
so has part: feature:232672-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-252635:1:exon

position:229376:1
position: 229376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229376-231063:1:exon

position:231063:1
position: 231063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232672-232839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:251390-252635:1:exon

Sema4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sema4a
product: semaphorin 4A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026784055.1
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(231415..232006,232672..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..252635)
location: region:231415-252635:1
so has part: feature:231415-232006:1:exon
so has part: feature:232672-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-252635:1:exon

position:231415:1
position: 231415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231415-232006:1:exon

position:232006:1
position: 232006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232672-232839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:251390-252635:1:exon

Sema4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sema4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MALPSPGQDPWSLLGGFFFQLLLLLSLPPASGTGGQGPMPRVKYHAGDGHRALSFFHQKGLRDFDTLLLSADGNTLYVGAREAVLALNIQSPGIPQLRNMIPWPASERKKNDCAFKKKSSETQCFNFIRVLVSFNTTHLYACGTFAFSPACAFIELQDSHLLPILKDKVMDGKGQSPFDPAHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYISRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNIIRHAVLLPAHYSSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKFKELNKETSRWTTYRGPEANPRPGSCSTGPSSDKALTFMKDHFLMDEHVVARPLLVKSGVEYTQLAVELAQGLDGSSHVVMYLGTSTGSLHKAVVPENSSAYLVEEIQLSPEPEPVRNLQLAPTQGAVFSGFSGGVWKVPRANCRVYESCVDCVLARDPHCAWDPESGICSLLSGSTPSAWRQDMEQGNPEWACARGPMPRSPRRQSPPQLIKEVLAVPNSILELPCPHLSALASYYWSHGRTTIPEASSAIYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQSLALDPELAGIPRERVEVPLTRVGGGASMAAQRSYWPHFLIVTVLLALVLLGVLTLLLASPLGALRARGKVQGCGTLSPREKAPLSRERHLQPSKDYRTSASDVDADNNHLGTEVA
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(232701..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..251982)
location: region:232701-251982:1
so has part: feature:232701-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-251982:1:exon

XP_026639854.1
type: Protein
SIO_000068: ncbiprotein

position:232701:1
position: 232701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251982:1
position: 251982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232701-232839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251390-251982:1:exon

Sema4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sema4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MALPSPGQDPWSLLGGFFFQLLLLLSLPPASGTGGQGPMPRVKYHAGDGHRALSFFHQKGLRDFDTLLLSADGNTLYVGAREAVLALNIQSPGIPQLRNMIPWPASERKKNDCAFKKKSSETQCFNFIRVLVSFNTTHLYACGTFAFSPACAFIELQDSHLLPILKDKVMDGKGQSPFDPAHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYISRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNIIRHAVLLPAHYSSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKFKELNKETSRWTTYRGPEANPRPGSCSTGPSSDKALTFMKDHFLMDEHVVARPLLVKSGVEYTQLAVELAQGLDGSSHVVMYLGTSTGSLHKAVVPENSSAYLVEEIQLSPEPEPVRNLQLAPTQGAVFSGFSGGVWKVPRANCRVYESCVDCVLARDPHCAWDPESGICSLLSGSTPSAWRQDMEQGNPEWACARGPMPRSPRRQSPPQLIKEVLAVPNSILELPCPHLSALASYYWSHGRTTIPEASSAIYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQSLALDPELAGIPRERVEVPLTRVGGGASMAAQRSYWPHFLIVTVLLALVLLGVLTLLLASPLGALRARGKVQGCGTLSPREKAPLSRERHLQPSKDYRTSASDVDADNNHLGTEVA
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(232701..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..251982)
location: region:232701-251982:1
so has part: feature:232701-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-251982:1:exon

XP_026639855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232701-232839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251390-251982:1:exon

Sema4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sema4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MALPSPGQDPWSLLGGFFFQLLLLLSLPPASGTGGQGPMPRVKYHAGDGHRALSFFHQKGLRDFDTLLLSADGNTLYVGAREAVLALNIQSPGIPQLRNMIPWPASERKKNDCAFKKKSSETQCFNFIRVLVSFNTTHLYACGTFAFSPACAFIELQDSHLLPILKDKVMDGKGQSPFDPAHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYISRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNIIRHAVLLPAHYSSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKFKELNKETSRWTTYRGPEANPRPGSCSTGPSSDKALTFMKDHFLMDEHVVARPLLVKSGVEYTQLAVELAQGLDGSSHVVMYLGTSTGSLHKAVVPENSSAYLVEEIQLSPEPEPVRNLQLAPTQGAVFSGFSGGVWKVPRANCRVYESCVDCVLARDPHCAWDPESGICSLLSGSTPSAWRQDMEQGNPEWACARGPMPRSPRRQSPPQLIKEVLAVPNSILELPCPHLSALASYYWSHGRTTIPEASSAIYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQSLALDPELAGIPRERVEVPLTRVGGGASMAAQRSYWPHFLIVTVLLALVLLGVLTLLLASPLGALRARGKVQGCGTLSPREKAPLSRERHLQPSKDYRTSASDVDADNNHLGTEVA
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(232701..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..251982)
location: region:232701-251982:1
so has part: feature:232701-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-251982:1:exon

XP_026639856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232701-232839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251390-251982:1:exon

Sema4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sema4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MALPSPGQDPWSLLGGFFFQLLLLLSLPPASGTGGQGPMPRVKYHAGDGHRALSFFHQKGLRDFDTLLLSADGNTLYVGAREAVLALNIQSPGIPQLRNMIPWPASERKKNDCAFKKKSSETQCFNFIRVLVSFNTTHLYACGTFAFSPACAFIELQDSHLLPILKDKVMDGKGQSPFDPAHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYISRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNIIRHAVLLPAHYSSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKFKELNKETSRWTTYRGPEANPRPGSCSTGPSSDKALTFMKDHFLMDEHVVARPLLVKSGVEYTQLAVELAQGLDGSSHVVMYLGTSTGSLHKAVVPENSSAYLVEEIQLSPEPEPVRNLQLAPTQGAVFSGFSGGVWKVPRANCRVYESCVDCVLARDPHCAWDPESGICSLLSGSTPSAWRQDMEQGNPEWACARGPMPRSPRRQSPPQLIKEVLAVPNSILELPCPHLSALASYYWSHGRTTIPEASSAIYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQSLALDPELAGIPRERVEVPLTRVGGGASMAAQRSYWPHFLIVTVLLALVLLGVLTLLLASPLGALRARGKVQGCGTLSPREKAPLSRERHLQPSKDYRTSASDVDADNNHLGTEVA
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(232701..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..251982)
location: region:232701-251982:1
so has part: feature:232701-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-251982:1:exon

XP_026639857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232701-232839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251390-251982:1:exon

Sema4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sema4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MALPSPGQDPWSLLGGFFFQLLLLLSLPPASGTGGQGPMPRVKYHAGDGHRALSFFHQKGLRDFDTLLLSADGNTLYVGAREAVLALNIQSPGIPQLRNMIPWPASERKKNDCAFKKKSSETQCFNFIRVLVSFNTTHLYACGTFAFSPACAFIELQDSHLLPILKDKVMDGKGQSPFDPAHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYISRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNIIRHAVLLPAHYSSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKFKELNKETSRWTTYRGPEANPRPGSCSTGPSSDKALTFMKDHFLMDEHVVARPLLVKSGVEYTQLAVELAQGLDGSSHVVMYLGTSTGSLHKAVVPENSSAYLVEEIQLSPEPEPVRNLQLAPTQGAVFSGFSGGVWKVPRANCRVYESCVDCVLARDPHCAWDPESGICSLLSGSTPSAWRQDMEQGNPEWACARGPMPRSPRRQSPPQLIKEVLAVPNSILELPCPHLSALASYYWSHGRTTIPEASSAIYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQSLALDPELAGIPRERVEVPLTRVGGGASMAAQRSYWPHFLIVTVLLALVLLGVLTLLLASPLGALRARGKVQGCGTLSPREKAPLSRERHLQPSKDYRTSASDVDADNNHLGTEVA
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(232701..232839,234569..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..251982)
location: region:232701-251982:1
so has part: feature:232701-232839:1:exon
so has part: feature:234569-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-251982:1:exon

XP_005356926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232701-232839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234569-234729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251390-251982:1:exon

Sema4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sema4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X2
translation: MIPWPASERKKNDCAFKKKSSETQCFNFIRVLVSFNTTHLYACGTFAFSPACAFIELQDSHLLPILKDKVMDGKGQSPFDPAHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYISRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNIIRHAVLLPAHYSSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKFKELNKETSRWTTYRGPEANPRPGSCSTGPSSDKALTFMKDHFLMDEHVVARPLLVKSGVEYTQLAVELAQGLDGSSHVVMYLGTSTGSLHKAVVPENSSAYLVEEIQLSPEPEPVRNLQLAPTQGAVFSGFSGGVWKVPRANCRVYESCVDCVLARDPHCAWDPESGICSLLSGSTPSAWRQDMEQGNPEWACARGPMPRSPRRQSPPQLIKEVLAVPNSILELPCPHLSALASYYWSHGRTTIPEASSAIYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQSLALDPELAGIPRERVEVPLTRVGGGASMAAQRSYWPHFLIVTVLLALVLLGVLTLLLASPLGALRARGKVQGCGTLSPREKAPLSRERHLQPSKDYRTSASDVDADNNHLGTEVA
SIO_010081: Sema4a
subclass of: SO_0000673
so part of: Sema4a
location: join(234727..234729,235577..235639,235820..235918,236124..236229,236879..236995,237359..237483,237602..237774,239795..239945,247430..247610,250155..250273,250380..250537,250790..250890,251390..251982)
location: region:234727-251982:1
so has part: feature:234727-234729:1:exon
so has part: feature:235577-235639:1:exon
so has part: feature:235820-235918:1:exon
so has part: feature:236124-236229:1:exon
so has part: feature:236879-236995:1:exon
so has part: feature:237359-237483:1:exon
so has part: feature:237602-237774:1:exon
so has part: feature:239795-239945:1:exon
so has part: feature:247430-247610:1:exon
so has part: feature:250155-250273:1:exon
so has part: feature:250380-250537:1:exon
so has part: feature:250790-250890:1:exon
so has part: feature:251390-251982:1:exon

XP_013205284.1
type: Protein
SIO_000068: ncbiprotein

position:234727:1
position: 234727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234727-234729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235577-235639:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235820-235918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236124-236229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236879-236995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237359-237483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237602-237774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239795-239945:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247430-247610:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:250155-250273:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250380-250537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250790-250890:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:251390-251982:1:exon

Slc25a44
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc25a44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 258393..272713
location: region:258393-272713:1
so has part: feature:258393-272713:1:exon
subclass of: SO_0000010

101984191
type: Gene
SIO_000068: ncbigene

position:258393:1
position: 258393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272713:1
position: 272713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258393-272713:1:exon

Slc25a44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc25a44
product: solute carrier family 25 member 44, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005356871.3
SIO_010081: Slc25a44
subclass of: SO_0000673
so part of: Slc25a44
location: join(258393..258553,262339..262976,267918..268045,270275..272713)
location: region:258393-272713:1
so has part: feature:258393-258553:1:exon
so has part: feature:262339-262976:1:exon
so has part: feature:267918-268045:1:exon
so has part: feature:270275-272713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258393-258553:1:exon

position:258553:1
position: 258553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262339-262976:1:exon

position:262339:1
position: 262339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262976:1
position: 262976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267918-268045:1:exon

position:267918:1
position: 267918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268045:1
position: 268045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270275-272713:1:exon

position:270275:1
position: 270275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc25a44
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Slc25a44
product: solute carrier family 25 member 44, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003377848.1
SIO_010081: Slc25a44
so part of: Slc25a44
location: join(258394..258801,262339..262976,267923..268045,268327..268428,270275..270349)
location: region:258394-270349:1
so has part: feature:258394-258801:1:exon
so has part: feature:262339-262976:1:exon
so has part: feature:267923-268045:1:exon
so has part: feature:268327-268428:1:exon
so has part: feature:270275-270349:1:exon

position:258394:1
position: 258394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270349:1
position: 270349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258394-258801:1:exon

position:258801:1
position: 258801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262339-262976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267923-268045:1:exon

position:267923:1
position: 267923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268327-268428:1:exon

position:268327:1
position: 268327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268428:1
position: 268428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270275-270349:1:exon

Slc25a44
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Slc25a44
product: solute carrier family 25 member 44, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003377847.1
SIO_010081: Slc25a44
so part of: Slc25a44
location: join(258396..258801,262339..262976,267918..268045,268327..268428,270275..270349)
location: region:258396-270349:1
so has part: feature:258396-258801:1:exon
so has part: feature:262339-262976:1:exon
so has part: feature:267918-268045:1:exon
so has part: feature:268327-268428:1:exon
so has part: feature:270275-270349:1:exon

position:258396:1
position: 258396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258396-258801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262339-262976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267918-268045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268327-268428:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270275-270349:1:exon

Slc25a44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc25a44
product: solute carrier family 25 member 44, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005356870.3
SIO_010081: Slc25a44
subclass of: SO_0000673
so part of: Slc25a44
location: join(258397..258801,262339..262976,267918..268045,270275..272713)
location: region:258397-272713:1
so has part: feature:258397-258801:1:exon
so has part: feature:262339-262976:1:exon
so has part: feature:267918-268045:1:exon
so has part: feature:270275-272713:1:exon

position:258397:1
position: 258397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258397-258801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262339-262976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267918-268045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270275-272713:1:exon

Slc25a44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc25a44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44 isoform X1
translation: MARSIPRDPELAVQEPDRRSPGTMEDKRNIQIIEWEHLDKKKFYVFGVAMTMMIRVSMYPFTLIRTRLQVQKGKSLYHGTFDAFVKILRAEGVAGLYRGFLVNTFTLISGQCYVTTYELTRKFVADYSQSNTVKSLVAGGSASLVAQSITVPIDVVSQHLMMQRKGEKMGRFQVPGNLEGQGLIAFGQTKDIIRQILRADGLRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSRLCPQDCPHIVFQAVSGPLAAATASVLTNPMDVIRTRVQVEGKSSIILTFRQLMAEEGPWGLMKGLSARIISATPSTIVIVVGYESLKKLSLRPELVDSRHW
SIO_010081: Slc25a44
subclass of: SO_0000673
so part of: Slc25a44
location: join(258746..258801,262339..262976,267918..268045,270275..270466)
location: region:258746-270466:1
so has part: feature:258746-258801:1:exon
so has part: feature:262339-262976:1:exon
so has part: feature:267918-268045:1:exon
so has part: feature:270275-270466:1:exon

XP_005356927.1
type: Protein
SIO_000068: ncbiprotein

position:258746:1
position: 258746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270466:1
position: 270466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258746-258801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262339-262976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267918-268045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270275-270466:1:exon

Slc25a44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc25a44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44 isoform X2
translation: MEDKRNIQIIEWEHLDKKKFYVFGVAMTMMIRVSMYPFTLIRTRLQVQKGKSLYHGTFDAFVKILRAEGVAGLYRGFLVNTFTLISGQCYVTTYELTRKFVADYSQSNTVKSLVAGGSASLVAQSITVPIDVVSQHLMMQRKGEKMGRFQVPGNLEGQGLIAFGQTKDIIRQILRADGLRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSRLCPQDCPHIVFQAVSGPLAAATASVLTNPMDVIRTRVQVEGKSSIILTFRQLMAEEGPWGLMKGLSARIISATPSTIVIVVGYESLKKLSLRPELVDSRHW
SIO_010081: Slc25a44
subclass of: SO_0000673
so part of: Slc25a44
location: join(262352..262976,267918..268045,270275..270466)
location: region:262352-270466:1
so has part: feature:262352-262976:1:exon
so has part: feature:267918-268045:1:exon
so has part: feature:270275-270466:1:exon

XP_005356928.1
type: Protein
SIO_000068: ncbiprotein

position:262352:1
position: 262352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262352-262976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267918-268045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270275-270466:1:exon

LOC101984860
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272786..303397
location: region:272786-303397:1
so has part: feature:272786-303397:1:exon
subclass of: SO_0000010

101984860
type: Gene
SIO_000068: ncbigene

position:272786:1
position: 272786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303397:1
position: 303397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272786-303397:1:exon

LOC101984860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101984860
product: polyamine-modulated factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005356873.2
SIO_010081: LOC101984860
subclass of: SO_0000673
so part of: LOC101984860
location: join(272786..273051,297343..297448,298184..298284,300557..300752,303036..303397)
location: region:272786-303397:1
so has part: feature:272786-273051:1:exon
so has part: feature:297343-297448:1:exon
so has part: feature:298184-298284:1:exon
so has part: feature:300557-300752:1:exon
so has part: feature:303036-303397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272786-273051:1:exon

position:273051:1
position: 273051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297343-297448:1:exon

position:297343:1
position: 297343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297448:1
position: 297448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298184-298284:1:exon

position:298184:1
position: 298184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298284:1
position: 298284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300557-300752:1:exon

position:300557:1
position: 300557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300752:1
position: 300752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:303036-303397:1:exon

position:303036:1
position: 303036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101984860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101984860
product: polyamine-modulated factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_026784020.1
SIO_010081: LOC101984860
subclass of: SO_0000673
so part of: LOC101984860
location: join(272786..273051,300557..300752,303036..303397)
location: region:272786-303397:1
so has part: feature:272786-273051:1:exon
so has part: feature:300557-300752:1:exon
so has part: feature:303036-303397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272786-273051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300557-300752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303036-303397:1:exon

LOC101984860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101984860
product: polyamine-modulated factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784022.1
SIO_010081: LOC101984860
subclass of: SO_0000673
so part of: LOC101984860
location: join(272786..273051,297343..297448,298184..298284,300618..300752,303036..303075)
location: region:272786-303075:1
so has part: feature:272786-273051:1:exon
so has part: feature:297343-297448:1:exon
so has part: feature:298184-298284:1:exon
so has part: feature:300618-300752:1:exon
so has part: feature:303036-303075:1:exon

position:303075:1
position: 303075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272786-273051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297343-297448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298184-298284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300618-300752:1:exon

position:300618:1
position: 300618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:303036-303075:1:exon

LOC101984860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101984860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1 isoform X1
translation: MADVSHSNEAVEKGPEGFSPESVPVDTTISRVELLDTILDTFLQKLVAARSFERFTSCYKPFQQLDPKVMQWVYDKFVTQLQTSIREEISEIKEEGNLEAVLNSLDKIVEEGKANGEPAWRPSGTPEKDLCSVMAPYFLQQRDALCHRVQKQKAKNQDLADAVLAGRRQLEGLQQQIQALQQTWQALHREQRELLSVLRAPE
SIO_010081: LOC101984860
subclass of: SO_0000673
so part of: LOC101984860
location: join(272900..273051,297343..297448,298184..298284,300557..300752,303036..303089)
location: region:272900-303089:1
so has part: feature:272900-273051:1:exon
so has part: feature:297343-297448:1:exon
so has part: feature:298184-298284:1:exon
so has part: feature:300557-300752:1:exon
so has part: feature:303036-303089:1:exon

XP_005356930.1
type: Protein
SIO_000068: ncbiprotein

position:272900:1
position: 272900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303089:1
position: 303089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272900-273051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297343-297448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298184-298284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300557-300752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303036-303089:1:exon

LOC101984860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101984860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1 isoform X2
translation: MADVSHSNEAVEKGPEGFSPESVPVDTTISRVELLDTILDTFLQKLVAARRRPSGTPEKDLCSVMAPYFLQQRDALCHRVQKQKAKNQDLADAVLAGRRQLEGLQQQIQALQQTWQALHREQRELLSVLRAPE
SIO_010081: LOC101984860
subclass of: SO_0000673
so part of: LOC101984860
location: join(272900..273051,300557..300752,303036..303089)
location: region:272900-303089:1
so has part: feature:272900-273051:1:exon
so has part: feature:300557-300752:1:exon
so has part: feature:303036-303089:1:exon

XP_026639821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272900-273051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300557-300752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303036-303089:1:exon

LOC101984860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101984860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1 isoform X3
translation: MADVSHSNEAVEKGPEGFSPESVPVDTTISRVELLDTILDTFLQKLVAARSFERFTSCYKPFQQLDPKVMQWVYDKFVTQLQTSIREEISEIKEEGNLEAVLNSLDKIVEEGKANGEPACNGMPCATECRSRRPRIRTWLMLSWLGAGSWRGCSSRSRPSSRHGRLFTESRGNCCQC
SIO_010081: LOC101984860
subclass of: SO_0000673
so part of: LOC101984860
location: join(272900..273051,297343..297448,298184..298284,300618..300752,303036..303075)
location: region:272900-303075:1
so has part: feature:272900-273051:1:exon
so has part: feature:297343-297448:1:exon
so has part: feature:298184-298284:1:exon
so has part: feature:300618-300752:1:exon
so has part: feature:303036-303075:1:exon

XP_026639823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272900-273051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297343-297448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298184-298284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300618-300752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303036-303075:1:exon

Bglap
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Bglap
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304960..305896
location: region:304960-305896:1
so has part: feature:304960-305896:1:exon
subclass of: SO_0000010

101985153
type: Gene
SIO_000068: ncbigene

position:304960:1
position: 304960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305896:1
position: 305896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304960-305896:1:exon

Bglap
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bglap
product: bone gamma-carboxyglutamate protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005356875.2
SIO_010081: Bglap
subclass of: SO_0000673
so part of: Bglap
location: join(304960..305193,305284..305316,305432..305501,305668..305896)
location: region:304960-305896:1
so has part: feature:304960-305193:1:exon
so has part: feature:305284-305316:1:exon
so has part: feature:305432-305501:1:exon
so has part: feature:305668-305896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304960-305193:1:exon

position:305193:1
position: 305193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305284-305316:1:exon

position:305284:1
position: 305284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305316:1
position: 305316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305432-305501:1:exon

position:305432:1
position: 305432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305501:1
position: 305501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305668-305896:1:exon

position:305668:1
position: 305668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Bglap
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bglap
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin
translation: MTPQLVLAASPAPPAHTGGTGSGYKWYWRLKGTEQTSSTQHPSAELAGTMRTLSLLTLLALAAFCLSGPADAKPRGSESDKAFVSKQEGSKVVNRLRRYVGHGLGAPAPYPDPLEPKREVCELNPNCDELADHIGFQDAYSRFYGTTV
SIO_010081: Bglap
subclass of: SO_0000673
so part of: Bglap
location: join(304983..305193,305284..305316,305432..305501,305668..305800)
location: region:304983-305800:1
so has part: feature:304983-305193:1:exon
so has part: feature:305284-305316:1:exon
so has part: feature:305432-305501:1:exon
so has part: feature:305668-305800:1:exon

XP_005356932.2
type: Protein
SIO_000068: ncbiprotein

position:304983:1
position: 304983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305800:1
position: 305800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304983-305193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305284-305316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305432-305501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305668-305800:1:exon

Paqr6
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Paqr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(305981..310147)
location: region:305981-310147:-1
so has part: feature:305981-310147:-1:exon
subclass of: SO_0000010

101985618
type: Gene
SIO_000068: ncbigene

position:305981:-1
position: 305981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310147:-1
position: 310147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305981-310147:-1:exon

Paqr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Paqr6
product: progestin and adipoQ receptor family member 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026784207.1
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(305981..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309076..309142,309860..310147))
location: region:305981-310147:-1
so has part: feature:309860-310147:-1:exon
so has part: feature:309076-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:305981-306685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309860-310147:-1:exon

position:309860:-1
position: 309860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309076-309142:-1:exon

position:309076:-1
position: 309076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309142:-1
position: 309142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

position:308428:-1
position: 308428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308555:-1
position: 308555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

position:308127:-1
position: 308127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308329:-1
position: 308329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

position:307926:-1
position: 307926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308052:-1
position: 308052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

position:307227:-1
position: 307227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307323:-1
position: 307323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

position:306975:-1
position: 306975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307125:-1
position: 307125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:305981-306685:-1:exon

position:306685:-1
position: 306685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Paqr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Paqr6
product: progestin and adipoQ receptor family member 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005356876.3
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(305981..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309142,309860..310143))
location: region:305981-310143:-1
so has part: feature:309860-310143:-1:exon
so has part: feature:309067-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:305981-306685:-1:exon

position:310143:-1
position: 310143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309860-310143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309067-309142:-1:exon

position:309067:-1
position: 309067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305981-306685:-1:exon

Paqr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Paqr6
product: progestin and adipoQ receptor family member 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026784209.1
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(305981..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309142,309784..309805))
location: region:305981-309805:-1
so has part: feature:309784-309805:-1:exon
so has part: feature:309067-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:305981-306685:-1:exon

position:309805:-1
position: 309805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309784-309805:-1:exon

position:309784:-1
position: 309784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309067-309142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305981-306685:-1:exon

Paqr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Paqr6
product: progestin and adipoQ receptor family member 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005356877.3
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(305981..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309142,309553..309731))
location: region:305981-309731:-1
so has part: feature:309553-309731:-1:exon
so has part: feature:309067-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:305981-306685:-1:exon

position:309731:-1
position: 309731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309553-309731:-1:exon

position:309553:-1
position: 309553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309067-309142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305981-306685:-1:exon

Paqr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Paqr6
product: progestin and adipoQ receptor family member 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026784210.1
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(305981..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309142,309490..309508))
location: region:305981-309508:-1
so has part: feature:309490-309508:-1:exon
so has part: feature:309067-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:305981-306685:-1:exon

position:309508:-1
position: 309508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309490-309508:-1:exon

position:309490:-1
position: 309490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309067-309142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305981-306685:-1:exon

Paqr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Paqr6
product: progestin and adipoQ receptor family member 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026784211.1
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(305981..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309142,309246..309258))
location: region:305981-309258:-1
so has part: feature:309246-309258:-1:exon
so has part: feature:309067-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:305981-306685:-1:exon

position:309258:-1
position: 309258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309246-309258:-1:exon

position:309246:-1
position: 309246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309067-309142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305981-306685:-1:exon

Paqr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Paqr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor delta isoform X2
translation: MAHIPSHSRILAGSQVSLWEMKYRPSLAFLSAAEISRPYCDGRWTSPRIVSQGEGSSQDRHLSYTASSLGMKGLGTRTTWRYLATMLSLKLPQLLQVHQVFWEDNIMSGYRRPTSSALDCVLSSFQMTNETVNIWTHFLPTWYFLWRLLALGSSGFPAEPYHLPLLVFLLPACLYPFASCCAHTFSSMSPRVRHICYFLDYGALSLYSVGCAFPYAAYSMPASWLHGRLHQFFVPAAALNSFLCTGLSCYSRFPELESPRLSKVLRTSAFAYPFLFDNLPLFYRLQLCWGRTHSCGQEALSSSHVYHLFCALLTGFLFAARLPERLAPGRFDYIGHSHQLFHICAVLGTHFQLEAVLVDMGSRKAWLTMQEPTLGLEATMATLSLAVIGNLLIIAAFTAYLLRSPGSCPLLQGGPLEEEVQAKRQ
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(306411..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309076..309142,309860..310089))
location: region:306411-310089:-1
so has part: feature:309860-310089:-1:exon
so has part: feature:309076-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:306411-306685:-1:exon

XP_026640008.1
type: Protein
SIO_000068: ncbiprotein

position:306411:-1
position: 306411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310089:-1
position: 310089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309860-310089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309076-309142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306411-306685:-1:exon

Paqr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Paqr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor delta isoform X1
translation: MAHIPSHSRILAGSQVSLWEMKYRPSLAFLSAAEISRPYCDGRWTSPRIVSQGEGSSQDRHLSYTASSLGMKGLGTRTTWRYLATMLSLKLPQLLQVHQVPRVFWEDNIMSGYRRPTSSALDCVLSSFQMTNETVNIWTHFLPTWYFLWRLLALGSSGFPAEPYHLPLLVFLLPACLYPFASCCAHTFSSMSPRVRHICYFLDYGALSLYSVGCAFPYAAYSMPASWLHGRLHQFFVPAAALNSFLCTGLSCYSRFPELESPRLSKVLRTSAFAYPFLFDNLPLFYRLQLCWGRTHSCGQEALSSSHVYHLFCALLTGFLFAARLPERLAPGRFDYIGHSHQLFHICAVLGTHFQLEAVLVDMGSRKAWLTMQEPTLGLEATMATLSLAVIGNLLIIAAFTAYLLRSPGSCPLLQGGPLEEEVQAKRQ
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(306411..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309142,309860..310089))
location: region:306411-310089:-1
so has part: feature:309860-310089:-1:exon
so has part: feature:309067-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:306411-306685:-1:exon

XP_005356933.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309860-310089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309067-309142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306411-306685:-1:exon

Paqr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Paqr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor delta isoform X3
translation: MCLARRLKGGRGRRSRGHPDAARRTTWRYLATMLSLKLPQLLQVHQVPRVFWEDNIMSGYRRPTSSALDCVLSSFQMTNETVNIWTHFLPTWYFLWRLLALGSSGFPAEPYHLPLLVFLLPACLYPFASCCAHTFSSMSPRVRHICYFLDYGALSLYSVGCAFPYAAYSMPASWLHGRLHQFFVPAAALNSFLCTGLSCYSRFPELESPRLSKVLRTSAFAYPFLFDNLPLFYRLQLCWGRTHSCGQEALSSSHVYHLFCALLTGFLFAARLPERLAPGRFDYIGHSHQLFHICAVLGTHFQLEAVLVDMGSRKAWLTMQEPTLGLEATMATLSLAVIGNLLIIAAFTAYLLRSPGSCPLLQGGPLEEEVQAKRQ
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(306411..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309142,309553..309623))
location: region:306411-309623:-1
so has part: feature:309553-309623:-1:exon
so has part: feature:309067-309142:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:306411-306685:-1:exon

XP_005356934.2
type: Protein
SIO_000068: ncbiprotein

position:309623:-1
position: 309623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309553-309623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309067-309142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306411-306685:-1:exon

Paqr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Paqr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor delta isoform X4
translation: MLSLKLPQLLQVHQVPRVFWEDNIMSGYRRPTSSALDCVLSSFQMTNETVNIWTHFLPTWYFLWRLLALGSSGFPAEPYHLPLLVFLLPACLYPFASCCAHTFSSMSPRVRHICYFLDYGALSLYSVGCAFPYAAYSMPASWLHGRLHQFFVPAAALNSFLCTGLSCYSRFPELESPRLSKVLRTSAFAYPFLFDNLPLFYRLQLCWGRTHSCGQEALSSSHVYHLFCALLTGFLFAARLPERLAPGRFDYIGHSHQLFHICAVLGTHFQLEAVLVDMGSRKAWLTMQEPTLGLEATMATLSLAVIGNLLIIAAFTAYLLRSPGSCPLLQGGPLEEEVQAKRQ
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(306411..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309117))
location: region:306411-309117:-1
so has part: feature:309067-309117:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:306411-306685:-1:exon

XP_026640010.1
type: Protein
SIO_000068: ncbiprotein

position:309117:-1
position: 309117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309067-309117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306411-306685:-1:exon

Paqr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Paqr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor delta isoform X4
translation: MLSLKLPQLLQVHQVPRVFWEDNIMSGYRRPTSSALDCVLSSFQMTNETVNIWTHFLPTWYFLWRLLALGSSGFPAEPYHLPLLVFLLPACLYPFASCCAHTFSSMSPRVRHICYFLDYGALSLYSVGCAFPYAAYSMPASWLHGRLHQFFVPAAALNSFLCTGLSCYSRFPELESPRLSKVLRTSAFAYPFLFDNLPLFYRLQLCWGRTHSCGQEALSSSHVYHLFCALLTGFLFAARLPERLAPGRFDYIGHSHQLFHICAVLGTHFQLEAVLVDMGSRKAWLTMQEPTLGLEATMATLSLAVIGNLLIIAAFTAYLLRSPGSCPLLQGGPLEEEVQAKRQ
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(306411..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309117))
location: region:306411-309117:-1
so has part: feature:309067-309117:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:306411-306685:-1:exon

XP_026640011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309067-309117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306411-306685:-1:exon

Paqr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Paqr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor delta isoform X4
translation: MLSLKLPQLLQVHQVPRVFWEDNIMSGYRRPTSSALDCVLSSFQMTNETVNIWTHFLPTWYFLWRLLALGSSGFPAEPYHLPLLVFLLPACLYPFASCCAHTFSSMSPRVRHICYFLDYGALSLYSVGCAFPYAAYSMPASWLHGRLHQFFVPAAALNSFLCTGLSCYSRFPELESPRLSKVLRTSAFAYPFLFDNLPLFYRLQLCWGRTHSCGQEALSSSHVYHLFCALLTGFLFAARLPERLAPGRFDYIGHSHQLFHICAVLGTHFQLEAVLVDMGSRKAWLTMQEPTLGLEATMATLSLAVIGNLLIIAAFTAYLLRSPGSCPLLQGGPLEEEVQAKRQ
SIO_010081: Paqr6
subclass of: SO_0000673
so part of: Paqr6
location: complement(join(306411..306685,306975..307125,307227..307323,307926..308052,308127..308329,308428..308555,309067..309117))
location: region:306411-309117:-1
so has part: feature:309067-309117:-1:exon
so has part: feature:308428-308555:-1:exon
so has part: feature:308127-308329:-1:exon
so has part: feature:307926-308052:-1:exon
so has part: feature:307227-307323:-1:exon
so has part: feature:306975-307125:-1:exon
so has part: feature:306411-306685:-1:exon

XP_026640012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309067-309117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308428-308555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308127-308329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307926-308052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307227-307323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306975-307125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306411-306685:-1:exon

Smg5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Smg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(312213..340336)
location: region:312213-340336:-1
so has part: feature:312213-340336:-1:exon
subclass of: SO_0000010

101986095
type: Gene
SIO_000068: ncbigene

position:312213:-1
position: 312213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340336:-1
position: 340336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312213-340336:-1:exon

Smg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Smg5
product: SMG5, nonsense mediated mRNA decay factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005356878.3
SIO_010081: Smg5
subclass of: SO_0000673
so part of: Smg5
location: complement(join(312213..313515,313603..313741,313970..314044,314745..314835,315162..315321,315543..315602,318755..318913,319827..320002,320592..320667,321534..321709,323081..323680,323809..323946,324468..324676,325385..325453,325557..325682,327734..327812,328989..329078,329990..330079,332309..332465,332810..332933,333340..333438,340095..340336))
location: region:312213-340336:-1
so has part: feature:340095-340336:-1:exon
so has part: feature:333340-333438:-1:exon
so has part: feature:332810-332933:-1:exon
so has part: feature:332309-332465:-1:exon
so has part: feature:329990-330079:-1:exon
so has part: feature:328989-329078:-1:exon
so has part: feature:327734-327812:-1:exon
so has part: feature:325557-325682:-1:exon
so has part: feature:325385-325453:-1:exon
so has part: feature:324468-324676:-1:exon
so has part: feature:323809-323946:-1:exon
so has part: feature:323081-323680:-1:exon
so has part: feature:321534-321709:-1:exon
so has part: feature:320592-320667:-1:exon
so has part: feature:319827-320002:-1:exon
so has part: feature:318755-318913:-1:exon
so has part: feature:315543-315602:-1:exon
so has part: feature:315162-315321:-1:exon
so has part: feature:314745-314835:-1:exon
so has part: feature:313970-314044:-1:exon
so has part: feature:313603-313741:-1:exon
so has part: feature:312213-313515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340095-340336:-1:exon

position:340095:-1
position: 340095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333340-333438:-1:exon

position:333340:-1
position: 333340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333438:-1
position: 333438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332810-332933:-1:exon

position:332810:-1
position: 332810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332933:-1
position: 332933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332309-332465:-1:exon

position:332309:-1
position: 332309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332465:-1
position: 332465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:329990-330079:-1:exon

position:329990:-1
position: 329990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330079:-1
position: 330079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:328989-329078:-1:exon

position:328989:-1
position: 328989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329078:-1
position: 329078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:327734-327812:-1:exon

position:327734:-1
position: 327734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327812:-1
position: 327812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:325557-325682:-1:exon

position:325557:-1
position: 325557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325682:-1
position: 325682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:325385-325453:-1:exon

position:325385:-1
position: 325385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325453:-1
position: 325453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:324468-324676:-1:exon

position:324468:-1
position: 324468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324676:-1
position: 324676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:323809-323946:-1:exon

position:323809:-1
position: 323809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323946:-1
position: 323946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:323081-323680:-1:exon

position:323081:-1
position: 323081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323680:-1
position: 323680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:321534-321709:-1:exon

position:321534:-1
position: 321534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321709:-1
position: 321709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:320592-320667:-1:exon

position:320592:-1
position: 320592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320667:-1
position: 320667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:319827-320002:-1:exon

position:319827:-1
position: 319827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320002:-1
position: 320002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:318755-318913:-1:exon

position:318755:-1
position: 318755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318913:-1
position: 318913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:315543-315602:-1:exon

position:315543:-1
position: 315543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315602:-1
position: 315602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:315162-315321:-1:exon

position:315162:-1
position: 315162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315321:-1
position: 315321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:314745-314835:-1:exon

position:314745:-1
position: 314745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314835:-1
position: 314835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:313970-314044:-1:exon

position:313970:-1
position: 313970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314044:-1
position: 314044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:313603-313741:-1:exon

position:313603:-1
position: 313603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313741:-1
position: 313741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:312213-313515:-1:exon

position:313515:-1
position: 313515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Smg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Smg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG5
translation: MSQGPPPVESGEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENVSLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGDLSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKSETRKLSPSKKRCKDIKRLLVNFMYLQSLLQPKSSSMDSELTSLCQSVLEDFNLCLFYLPSSPNLGLTNEEEEECESGYAYLPDLLIFQMAIICLMGVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVSAFQSDGTDEPESKELLEKEEPEPEPPTVMPQTDEGRKSRKHSRLSCLRRRRRRRHHPPKAGDDSDLSEGFESDSSHDSVQASDGSDSGSDKSLEGRGTAFDAETDSEMNSQESRSDLEDMEDEEGTRSPALEPPQARSEVPEALNGPLGPSDASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTEPNSVDSHRSCVNGDVDKPLEPASEDGSESEGSESSSRSCRNERSLQEKLQALMAEGLLPAVKVFLDWLRTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQDSGLALCPQVHSLLEGCELPDLPAGLLLPEDMALRNLPPLRTAHRRFNFDADRPLLSALEESVVRICYIRSFGHFVARLQGSILQFNPEVGIFVSIAQSEQESLLQQAQAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLIPDTQALCYHLPLIRQLATSGRFIIIIPRTVIDGLDLLKKEQPGARDGIRYLEAEFKKGNRYIRCQKEMGKSFERHKLKRQDADAWTLYKILDSCRQLTLAQGAGEEDPSGMVTIITGLHLDNPSVLSGPMQAALQAAAHASVDVKNVVDFYRQWKEIG
SIO_010081: Smg5
subclass of: SO_0000673
so part of: Smg5
location: complement(join(313432..313515,313603..313741,313970..314044,314745..314835,315162..315321,315543..315602,318755..318913,319827..320002,320592..320667,321534..321709,323081..323680,323809..323946,324468..324676,325385..325453,325557..325682,327734..327812,328989..329078,329990..330079,332309..332465,332810..332933,333340..333438,340095..340168))
location: region:313432-340168:-1
so has part: feature:340095-340168:-1:exon
so has part: feature:333340-333438:-1:exon
so has part: feature:332810-332933:-1:exon
so has part: feature:332309-332465:-1:exon
so has part: feature:329990-330079:-1:exon
so has part: feature:328989-329078:-1:exon
so has part: feature:327734-327812:-1:exon
so has part: feature:325557-325682:-1:exon
so has part: feature:325385-325453:-1:exon
so has part: feature:324468-324676:-1:exon
so has part: feature:323809-323946:-1:exon
so has part: feature:323081-323680:-1:exon
so has part: feature:321534-321709:-1:exon
so has part: feature:320592-320667:-1:exon
so has part: feature:319827-320002:-1:exon
so has part: feature:318755-318913:-1:exon
so has part: feature:315543-315602:-1:exon
so has part: feature:315162-315321:-1:exon
so has part: feature:314745-314835:-1:exon
so has part: feature:313970-314044:-1:exon
so has part: feature:313603-313741:-1:exon
so has part: feature:313432-313515:-1:exon

XP_005356935.1
type: Protein
SIO_000068: ncbiprotein

position:313432:-1
position: 313432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340168:-1
position: 340168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340095-340168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333340-333438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332810-332933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332309-332465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329990-330079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:328989-329078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327734-327812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325557-325682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:325385-325453:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:324468-324676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:323809-323946:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:323081-323680:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:321534-321709:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320592-320667:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:319827-320002:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:318755-318913:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:315543-315602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:315162-315321:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:314745-314835:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:313970-314044:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:313603-313741:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:313432-313515:-1:exon

Tmem79
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmem79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 343824..347183
location: region:343824-347183:1
so has part: feature:343824-347183:1:exon
subclass of: SO_0000010

101986385
type: Gene
SIO_000068: ncbigene

position:343824:1
position: 343824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347183:1
position: 347183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343824-347183:1:exon

Tmem79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmem79
product: transmembrane protein 79
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356879.1
SIO_010081: Tmem79
subclass of: SO_0000673
so part of: Tmem79
location: join(343824..344625,344835..345048,346970..347183)
location: region:343824-347183:1
so has part: feature:343824-344625:1:exon
so has part: feature:344835-345048:1:exon
so has part: feature:346970-347183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343824-344625:1:exon

position:344625:1
position: 344625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344835-345048:1:exon

position:344835:1
position: 344835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345048:1
position: 345048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346970-347183:1:exon

position:346970:1
position: 346970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmem79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmem79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79
translation: MTEPETLALLEMKAPEALEKSLPRALAPTDQLLEGEDGTESPGAESLRRGSSVGSPTVREGPEDGPDSTISEAATLPWGTDPQYSVLLPDPPGWRDIEPEPLELEEPLPKSEEPLPKSEEPLPKSEEPLKDDASLLPEKSVRAFVPIDLQCIERRPQEECIVHRKAGQAERRNFLPTRLSHHELPERKWAEAVVRPPGRSCGGCGSCGGREALRAVASVAAALIFFPCLLYGAYAFLPFDAPRLPTMSSRLIYTLRCGVFATFPIVLGLLVYGLSLLCFSALRPFGEPRREVEIHRQYVAQSVQLFTLYFFNLAVLSTYLPQDTLKLLPLLTGLFAVSRLIYWLTFAVGRSFRGFGYGLTFLPLLAMLMWNLYYMFMVEPERMLTASESRLDYPDHVRSLSDYRPRSWG
SIO_010081: Tmem79
subclass of: SO_0000673
so part of: Tmem79
location: join(343824..344625,344835..345048,346970..347183)
location: region:343824-347183:1
so has part: feature:343824-344625:1:exon
so has part: feature:344835-345048:1:exon
so has part: feature:346970-347183:1:exon

XP_005356936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343824-344625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344835-345048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346970-347183:1:exon

Glmp
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Glmp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(348410..351839)
location: region:348410-351839:-1
so has part: feature:348410-351839:-1:exon
subclass of: SO_0000010

101986672
type: Gene
SIO_000068: ncbigene

position:348410:-1
position: 348410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351839:-1
position: 351839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348410-351839:-1:exon

Glmp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Glmp
product: glycosylated lysosomal membrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_005356880.1
SIO_010081: Glmp
subclass of: SO_0000673
so part of: Glmp
location: complement(join(348410..348853,348943..349199,350276..350494,350591..350782,350941..351195,351687..351839))
location: region:348410-351839:-1
so has part: feature:351687-351839:-1:exon
so has part: feature:350941-351195:-1:exon
so has part: feature:350591-350782:-1:exon
so has part: feature:350276-350494:-1:exon
so has part: feature:348943-349199:-1:exon
so has part: feature:348410-348853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351687-351839:-1:exon

position:351687:-1
position: 351687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350941-351195:-1:exon

position:350941:-1
position: 350941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351195:-1
position: 351195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:350591-350782:-1:exon

position:350591:-1
position: 350591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350782:-1
position: 350782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:350276-350494:-1:exon

position:350276:-1
position: 350276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350494:-1
position: 350494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348943-349199:-1:exon

position:348943:-1
position: 348943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349199:-1
position: 349199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:348410-348853:-1:exon

position:348853:-1
position: 348853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Glmp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Glmp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosylated lysosomal membrane protein
translation: MCRCWEPYWGWVPCAPTPWLLLSLVCAAPFSLLGEEIRQVYMEVISGGPNPQNLLHIRAVGTNSTLHYVWGTLGPPAVVLVATNTTQSVLSVNWSLLLSPDPDGGLMVLPKDSIQFSSALVFTRLLEFDSTKVSKGAAQPSGKPYPPYSLAEFSWNSSWDLTTLSSAFRGHPVDDPTGAFANGSLAFKVQAFSGSGRPAQPPRLLHSADACQLEVALVGASPRGNHSLFGLEVATLDTGLSCPSVKELHFIDDEYAPAVFQLDQLLWDSSPSGFMQWRPVAFSQKQRGRESALPCQVSSLNYTLAHSLPRSPVVQAFFGSQKNLCAFTLTFGAPTGPGYWDEHYLSWSMLLGVGVPPVDSLSPLVLGIIAVALGTPGLLLLGGGLFLLLRHKPYSEYQSIN
SIO_010081: Glmp
subclass of: SO_0000673
so part of: Glmp
location: complement(join(348688..348853,348943..349199,350276..350494,350591..350782,350941..351195,351687..351803))
location: region:348688-351803:-1
so has part: feature:351687-351803:-1:exon
so has part: feature:350941-351195:-1:exon
so has part: feature:350591-350782:-1:exon
so has part: feature:350276-350494:-1:exon
so has part: feature:348943-349199:-1:exon
so has part: feature:348688-348853:-1:exon

XP_005356937.1
type: Protein
SIO_000068: ncbiprotein

position:348688:-1
position: 348688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351803:-1
position: 351803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351687-351803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350941-351195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350591-350782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350276-350494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348943-349199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:348688-348853:-1:exon

Cct3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cct3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354868..372557)
location: region:354868-372557:-1
so has part: feature:354868-372557:-1:exon
subclass of: SO_0000010

101987333
type: Gene
SIO_000068: ncbigene

position:354868:-1
position: 354868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372557:-1
position: 372557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354868-372557:-1:exon

Cct3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cct3
product: chaperonin containing TCP1 subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_005356883.2
SIO_010081: Cct3
subclass of: SO_0000673
so part of: Cct3
location: complement(join(354868..355193,355508..355639,355983..356228,358213..358393,361791..361872,362170..362302,363700..363849,365011..365197,366489..366606,366929..367025,368943..369005,369236..369286,370247..370308,372401..372557))
location: region:354868-372557:-1
so has part: feature:372401-372557:-1:exon
so has part: feature:370247-370308:-1:exon
so has part: feature:369236-369286:-1:exon
so has part: feature:368943-369005:-1:exon
so has part: feature:366929-367025:-1:exon
so has part: feature:366489-366606:-1:exon
so has part: feature:365011-365197:-1:exon
so has part: feature:363700-363849:-1:exon
so has part: feature:362170-362302:-1:exon
so has part: feature:361791-361872:-1:exon
so has part: feature:358213-358393:-1:exon
so has part: feature:355983-356228:-1:exon
so has part: feature:355508-355639:-1:exon
so has part: feature:354868-355193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372401-372557:-1:exon

position:372401:-1
position: 372401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370247-370308:-1:exon

position:370247:-1
position: 370247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370308:-1
position: 370308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369236-369286:-1:exon

position:369236:-1
position: 369236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369286:-1
position: 369286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:368943-369005:-1:exon

position:368943:-1
position: 368943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369005:-1
position: 369005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:366929-367025:-1:exon

position:366929:-1
position: 366929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367025:-1
position: 367025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:366489-366606:-1:exon

position:366489:-1
position: 366489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366606:-1
position: 366606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:365011-365197:-1:exon

position:365011:-1
position: 365011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365197:-1
position: 365197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:363700-363849:-1:exon

position:363700:-1
position: 363700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363849:-1
position: 363849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:362170-362302:-1:exon

position:362170:-1
position: 362170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362302:-1
position: 362302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:361791-361872:-1:exon

position:361791:-1
position: 361791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361872:-1
position: 361872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:358213-358393:-1:exon

position:358213:-1
position: 358213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358393:-1
position: 358393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:355983-356228:-1:exon

position:355983:-1
position: 355983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356228:-1
position: 356228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:355508-355639:-1:exon

position:355508:-1
position: 355508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355639:-1
position: 355639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:354868-355193:-1:exon

position:355193:-1
position: 355193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cct3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cct3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma
translation: MMGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALEDMINTLKKISTPVDVNNRDMMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQTRQSSAPDAGQE
SIO_010081: Cct3
subclass of: SO_0000673
so part of: Cct3
location: complement(join(355089..355193,355508..355639,355983..356228,358213..358393,361791..361872,362170..362302,363700..363849,365011..365197,366489..366606,366929..367025,368943..369005,369236..369286,370247..370308,372401..372431))
location: region:355089-372431:-1
so has part: feature:372401-372431:-1:exon
so has part: feature:370247-370308:-1:exon
so has part: feature:369236-369286:-1:exon
so has part: feature:368943-369005:-1:exon
so has part: feature:366929-367025:-1:exon
so has part: feature:366489-366606:-1:exon
so has part: feature:365011-365197:-1:exon
so has part: feature:363700-363849:-1:exon
so has part: feature:362170-362302:-1:exon
so has part: feature:361791-361872:-1:exon
so has part: feature:358213-358393:-1:exon
so has part: feature:355983-356228:-1:exon
so has part: feature:355508-355639:-1:exon
so has part: feature:355089-355193:-1:exon

XP_005356940.1
type: Protein
SIO_000068: ncbiprotein

position:355089:-1
position: 355089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372431:-1
position: 372431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372401-372431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370247-370308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:369236-369286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368943-369005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:366929-367025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366489-366606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365011-365197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363700-363849:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:362170-362302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361791-361872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358213-358393:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355983-356228:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355508-355639:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355089-355193:-1:exon

Tsacc
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tsacc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 371726..389195
location: region:371726-389195:1
so has part: feature:371726-389195:1:exon
subclass of: SO_0000010

101987788
type: Gene
SIO_000068: ncbigene

position:371726:1
position: 371726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389195:1
position: 389195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371726-389195:1:exon

Tsacc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tsacc
product: TSSK6 activating cochaperone
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784037.1
SIO_010081: Tsacc
subclass of: SO_0000673
so part of: Tsacc
location: join(371726..372304,376755..376814,384813..384935,388978..389195)
location: region:371726-389195:1
so has part: feature:371726-372304:1:exon
so has part: feature:376755-376814:1:exon
so has part: feature:384813-384935:1:exon
so has part: feature:388978-389195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371726-372304:1:exon

position:372304:1
position: 372304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376755-376814:1:exon

position:376755:1
position: 376755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376814:1
position: 376814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384813-384935:1:exon

position:384813:1
position: 384813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384935:1
position: 384935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:388978-389195:1:exon

position:388978:1
position: 388978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tsacc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tsacc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSSK6-activating co-chaperone protein
translation: MEQQTSNPTDQKAKEEDNAVCLCPAKPSPSYINLQANSLPATFLNIQTTELPSGAGQKPKECLRLLECVCANLQLQTQLAQQQMAILENLQASLSQLGPGQESSKGSFPVLYCSLLLNHLPQLHK
SIO_010081: Tsacc
subclass of: SO_0000673
so part of: Tsacc
location: join(376778..376814,384813..384935,388978..389195)
location: region:376778-389195:1
so has part: feature:376778-376814:1:exon
so has part: feature:384813-384935:1:exon
so has part: feature:388978-389195:1:exon

XP_026639838.1
type: Protein
SIO_000068: ncbiprotein

position:376778:1
position: 376778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376778-376814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384813-384935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388978-389195:1:exon

LOC106144024
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(417405..417699)
location: region:417405-417699:-1
so has part: feature:417405-417699:-1:exon

106144024
type: Gene
SIO_000068: ncbigene

position:417405:-1
position: 417405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417699:-1
position: 417699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417405-417699:-1:exon

LOC106144024
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144024
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC106144024
subclass of: SO_0000673
so part of: LOC106144024
location: complement(417405..417699)
location: region:417405-417699:-1
so has part: feature:417405-417699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417405-417699:-1:exon

Rhbg
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rhbg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 447251..454103
location: region:447251-454103:1
so has part: feature:447251-454103:1:exon
subclass of: SO_0000010

101988369
type: Gene
SIO_000068: ncbigene

position:447251:1
position: 447251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454103:1
position: 454103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447251-454103:1:exon

Rhbg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rhbg
product: Rh family B glycoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349798.2
SIO_010081: Rhbg
subclass of: SO_0000673
so part of: Rhbg
location: join(447251..447437,447714..447864,447965..448112,450356..450522,450688..450825,450982..451115,451567..451688,452579..452652,452750..454103)
location: region:447251-454103:1
so has part: feature:447251-447437:1:exon
so has part: feature:447714-447864:1:exon
so has part: feature:447965-448112:1:exon
so has part: feature:450356-450522:1:exon
so has part: feature:450688-450825:1:exon
so has part: feature:450982-451115:1:exon
so has part: feature:451567-451688:1:exon
so has part: feature:452579-452652:1:exon
so has part: feature:452750-454103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447251-447437:1:exon

position:447437:1
position: 447437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447714-447864:1:exon

position:447714:1
position: 447714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447864:1
position: 447864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447965-448112:1:exon

position:447965:1
position: 447965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448112:1
position: 448112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450356-450522:1:exon

position:450356:1
position: 450356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450522:1
position: 450522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450688-450825:1:exon

position:450688:1
position: 450688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450825:1
position: 450825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:450982-451115:1:exon

position:450982:1
position: 450982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451115:1
position: 451115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:451567-451688:1:exon

position:451567:1
position: 451567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451688:1
position: 451688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:452579-452652:1:exon

position:452579:1
position: 452579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452652:1
position: 452652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452750-454103:1:exon

position:452750:1
position: 452750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rhbg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rhbg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ammonium transporter Rh type B
translation: MVFVGFGFLMVFLQRYGFSSVGFTFLVATFTLQWATLVQGFLHSFHGGHIHVSVESLINADFCAGAVLISFGAVLGKTGPAQLLLMALLETVLFSVNEFILLSLLGVKDAGGSMTIHTFGAYFGLFLSRVLYRSQLEKSRHRQSSVYHSDLFAMIGTIFLWIFWPSFNSAPTALGDGQHRTALNTYYSLTASTLSTFALSALVSGDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGAVAAGFLAGTVSTLGYKFFTPVLEFRFKIQDTCGVHNLHGMPGLLGALLGVLVTWLATHEAYGDGLQNVFPLIAAGQRSPTSQAVYQLFGMFVTLLSAAVGGSLAGLLLRLPFLDSPPDSQCFEDQVYWEVPGEQEAEVQRPLQSEETQA
SIO_010081: Rhbg
subclass of: SO_0000673
so part of: Rhbg
location: join(447271..447437,447714..447864,447965..448112,450356..450522,450688..450825,450982..451115,451567..451688,452579..452652,452750..452812)
location: region:447271-452812:1
so has part: feature:447271-447437:1:exon
so has part: feature:447714-447864:1:exon
so has part: feature:447965-448112:1:exon
so has part: feature:450356-450522:1:exon
so has part: feature:450688-450825:1:exon
so has part: feature:450982-451115:1:exon
so has part: feature:451567-451688:1:exon
so has part: feature:452579-452652:1:exon
so has part: feature:452750-452812:1:exon

XP_013205252.1
type: Protein
SIO_000068: ncbiprotein

position:447271:1
position: 447271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452812:1
position: 452812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447271-447437:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447714-447864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447965-448112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450356-450522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450688-450825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450982-451115:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451567-451688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452579-452652:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452750-452812:1:exon

LOC101988071
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101988071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 448716..449680
location: region:448716-449680:1
so has part: feature:448716-449680:1:exon
subclass of: SO_0000010

101988071
type: Gene
SIO_000068: ncbigene

position:448716:1
position: 448716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449680:1
position: 449680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448716-449680:1:exon

LOC101988071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101988071
product: 40S ribosomal protein S26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_005356886.3
SIO_010081: LOC101988071
subclass of: SO_0000673
so part of: LOC101988071
location: join(448716..449070,449585..449680)
location: region:448716-449680:1
so has part: feature:448716-449070:1:exon
so has part: feature:449585-449680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448716-449070:1:exon

position:449070:1
position: 449070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449585-449680:1:exon

position:449585:1
position: 449585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101988071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101988071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S26
translation: MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM
SIO_010081: LOC101988071
subclass of: SO_0000673
so part of: LOC101988071
location: join(448759..449070,449585..449620)
location: region:448759-449620:1
so has part: feature:448759-449070:1:exon
so has part: feature:449585-449620:1:exon

XP_005356943.1
type: Protein
SIO_000068: ncbiprotein

position:448759:1
position: 448759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449620:1
position: 449620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448759-449070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449585-449620:1:exon

LOC101989283
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101989283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(465469..487008)
location: region:465469-487008:-1
so has part: feature:465469-487008:-1:exon
subclass of: SO_0000011

101989283
type: Gene
SIO_000068: ncbigene

position:465469:-1
position: 465469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487008:-1
position: 487008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465469-487008:-1:exon

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003377867.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,479358..480357,482341..482478,483834..483926,484079..484147,485681..485774,486215..486375,486769..487008))
location: region:465469-487008:-1
so has part: feature:486769-487008:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485681-485774:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:483834-483926:-1:exon
so has part: feature:482341-482478:-1:exon
so has part: feature:479358-480357:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486769-487008:-1:exon

position:486769:-1
position: 486769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

position:486215:-1
position: 486215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486375:-1
position: 486375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485774:-1:exon

position:485681:-1
position: 485681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485774:-1
position: 485774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:484079-484147:-1:exon

position:484079:-1
position: 484079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484147:-1
position: 484147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:483834-483926:-1:exon

position:483834:-1
position: 483834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483926:-1
position: 483926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:482341-482478:-1:exon

position:482341:-1
position: 482341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482478:-1
position: 482478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:479358-480357:-1:exon

position:479358:-1
position: 479358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480357:-1
position: 480357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:473100-473204:-1:exon

position:473100:-1
position: 473100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473204:-1
position: 473204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:467221-467344:-1:exon

position:467221:-1
position: 467221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467344:-1
position: 467344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:465469-465694:-1:exon

position:465694:-1
position: 465694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003377865.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,479258..480357,482341..482478,484079..484147,485681..485774,486215..486375,486769..487007))
location: region:465469-487007:-1
so has part: feature:486769-487007:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485681-485774:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:482341-482478:-1:exon
so has part: feature:479258-480357:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

position:487007:-1
position: 487007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486769-487007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484079-484147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482341-482478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479258-480357:-1:exon

position:479258:-1
position: 479258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:473100-473204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467221-467344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:465469-465694:-1:exon

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003377864.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,479258..480357,482341..482478,483834..483926,484079..484147,485681..485774,486215..486375,486769..487007))
location: region:465469-487007:-1
so has part: feature:486769-487007:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485681-485774:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:483834-483926:-1:exon
so has part: feature:482341-482478:-1:exon
so has part: feature:479258-480357:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486769-487007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484079-484147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:483834-483926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482341-482478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479258-480357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473100-473204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467221-467344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:465469-465694:-1:exon

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003377866.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,482341..482478,483834..483926,484079..484147,485681..485774,486215..486375,486769..486998))
location: region:465469-486998:-1
so has part: feature:486769-486998:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485681-485774:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:483834-483926:-1:exon
so has part: feature:482341-482478:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

position:486998:-1
position: 486998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486769-486998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484079-484147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:483834-483926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482341-482478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473100-473204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467221-467344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:465469-465694:-1:exon

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003377863.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,484079..484147,485218..485383,485681..485774,486215..486375,486769..486996))
location: region:465469-486996:-1
so has part: feature:486769-486996:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485681-485774:-1:exon
so has part: feature:485218-485383:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

position:486996:-1
position: 486996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486769-486996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485218-485383:-1:exon

position:485218:-1
position: 485218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485383:-1
position: 485383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484079-484147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473100-473204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:467221-467344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:465469-465694:-1:exon

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003377862.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,484079..484147,485615..485774,486215..486375,486769..486993))
location: region:465469-486993:-1
so has part: feature:486769-486993:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485615-485774:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

position:486993:-1
position: 486993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486769-486993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485615-485774:-1:exon

position:485615:-1
position: 485615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:484079-484147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473100-473204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467221-467344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:465469-465694:-1:exon

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_003377860.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,484079..484147,485681..485774,486215..486375,486769..486990))
location: region:465469-486990:-1
so has part: feature:486769-486990:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485681-485774:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

position:486990:-1
position: 486990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486769-486990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484079-484147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473100-473204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467221-467344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:465469-465694:-1:exon

LOC101989283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101989283
product: uncharacterized LOC101989283, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003377861.1
SIO_010081: LOC101989283
subclass of: SO_0000673
so part of: LOC101989283
location: complement(join(465469..465694,467221..467344,473100..473204,484079..484147,485681..485774,486215..486375,486676..486693))
location: region:465469-486693:-1
so has part: feature:486676-486693:-1:exon
so has part: feature:486215-486375:-1:exon
so has part: feature:485681-485774:-1:exon
so has part: feature:484079-484147:-1:exon
so has part: feature:473100-473204:-1:exon
so has part: feature:467221-467344:-1:exon
so has part: feature:465469-465694:-1:exon

position:486693:-1
position: 486693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486676-486693:-1:exon

position:486676:-1
position: 486676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486215-486375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484079-484147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473100-473204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467221-467344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:465469-465694:-1:exon

LOC101989484
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101989484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 508486..509672
location: region:508486-509672:1
so has part: feature:508486-509672:1:exon

101989484
type: Gene
SIO_000068: ncbigene

position:508486:1
position: 508486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509672:1
position: 509672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508486-509672:1:exon

LOC101989484
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101989484
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101989484
subclass of: SO_0000673
so part of: LOC101989484
location: 508486..509672
location: region:508486-509672:1
so has part: feature:508486-509672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508486-509672:1:exon

Mef2d
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mef2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(534232..560722)
location: region:534232-560722:-1
so has part: feature:534232-560722:-1:exon
subclass of: SO_0000010

101989767
type: Gene
SIO_000068: ncbigene

position:534232:-1
position: 534232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560722:-1
position: 560722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534232-560722:-1:exon

Mef2d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mef2d
product: myocyte enhancer factor 2D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026784216.1
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534232..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548313,560643..560722))
location: region:534232-560722:-1
so has part: feature:560643-560722:-1:exon
so has part: feature:548136-548313:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534232-534403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560643-560722:-1:exon

position:560643:-1
position: 560643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548136-548313:-1:exon

position:548136:-1
position: 548136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548313:-1
position: 548313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547473-547676:-1:exon

position:547473:-1
position: 547473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547676:-1
position: 547676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545674-545811:-1:exon

position:545674:-1
position: 545674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545811:-1
position: 545811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:544506-544716:-1:exon

position:544506:-1
position: 544506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544716:-1
position: 544716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:544262-544318:-1:exon

position:544262:-1
position: 544262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544318:-1
position: 544318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:542491-542681:-1:exon

position:542491:-1
position: 542491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542681:-1
position: 542681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:542036-542056:-1:exon

position:542036:-1
position: 542036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542056:-1
position: 542056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:540751-540880:-1:exon

position:540751:-1
position: 540751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540880:-1
position: 540880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:535289-535499:-1:exon

position:535289:-1
position: 535289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535499:-1
position: 535499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:534683-534989:-1:exon

position:534683:-1
position: 534683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534989:-1
position: 534989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:534232-534403:-1:exon

position:534403:-1
position: 534403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mef2d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mef2d
product: myocyte enhancer factor 2D, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005356890.2
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534232..534403,534683..534989,535289..535499,540751..540880,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548313,560039..560358))
location: region:534232-560358:-1
so has part: feature:560039-560358:-1:exon
so has part: feature:548136-548313:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534232-534403:-1:exon

position:560358:-1
position: 560358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560039-560358:-1:exon

position:560039:-1
position: 560039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548136-548313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534232-534403:-1:exon

Mef2d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mef2d
product: myocyte enhancer factor 2D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005356889.2
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534232..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548313,560039..560357))
location: region:534232-560357:-1
so has part: feature:560039-560357:-1:exon
so has part: feature:548136-548313:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534232-534403:-1:exon

position:560357:-1
position: 560357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560039-560357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548136-548313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534232-534403:-1:exon

Mef2d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mef2d
product: myocyte enhancer factor 2D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013349823.2
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534232..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548313,559408..559920))
location: region:534232-559920:-1
so has part: feature:559408-559920:-1:exon
so has part: feature:548136-548313:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534232-534403:-1:exon

position:559920:-1
position: 559920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559408-559920:-1:exon

position:559408:-1
position: 559408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548136-548313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534232-534403:-1:exon

Mef2d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mef2d
product: myocyte enhancer factor 2D, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026784217.1
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534232..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548313,553514..555664))
location: region:534232-555664:-1
so has part: feature:553514-555664:-1:exon
so has part: feature:548136-548313:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534232-534403:-1:exon

position:555664:-1
position: 555664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553514-555664:-1:exon

position:553514:-1
position: 553514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548136-548313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534232-534403:-1:exon

Mef2d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mef2d
product: myocyte enhancer factor 2D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_013349824.2
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534232..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548313,553008..553138))
location: region:534232-553138:-1
so has part: feature:553008-553138:-1:exon
so has part: feature:548136-548313:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534232-534403:-1:exon

position:553138:-1
position: 553138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553008-553138:-1:exon

position:553008:-1
position: 553008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548136-548313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534232-534403:-1:exon

Mef2d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mef2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X2
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRRYGSSVPAPNFAMPVTVPVSNQSSMQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHNTQLGAPSRKPDLRVITSQGGKGLMHHLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLSSAELSSLPAFSSPAGLALGNVTAWQQPQQPQQAQPPQSQPHPQPQQPQQPPQQQPHLVPVSLSNLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPDPGEGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEADGSAVKRMRLDTWTLK
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534392..534403,534683..534989,535289..535499,540751..540880,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548189))
location: region:534392-548189:-1
so has part: feature:548136-548189:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534392-534403:-1:exon

XP_005356947.1
type: Protein
SIO_000068: ncbiprotein

position:534392:-1
position: 534392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548189:-1
position: 548189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548136-548189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534392-534403:-1:exon

Mef2d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mef2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRRYGSSVPAPNFAMPVTVPVSNQSSMQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHNTQLGAPSRKPDLRVITSQGGKGLMHHLTEDHLDLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLSSAELSSLPAFSSPAGLALGNVTAWQQPQQPQQAQPPQSQPHPQPQQPQQPPQQQPHLVPVSLSNLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPDPGEGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEADGSAVKRMRLDTWTLK
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534392..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548189))
location: region:534392-548189:-1
so has part: feature:548136-548189:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534392-534403:-1:exon

XP_026640017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548136-548189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534392-534403:-1:exon

Mef2d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mef2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRRYGSSVPAPNFAMPVTVPVSNQSSMQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHNTQLGAPSRKPDLRVITSQGGKGLMHHLTEDHLDLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLSSAELSSLPAFSSPAGLALGNVTAWQQPQQPQQAQPPQSQPHPQPQQPQQPPQQQPHLVPVSLSNLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPDPGEGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEADGSAVKRMRLDTWTLK
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534392..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548189))
location: region:534392-548189:-1
so has part: feature:548136-548189:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534392-534403:-1:exon

XP_026640018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548136-548189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534392-534403:-1:exon

Mef2d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mef2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRRYGSSVPAPNFAMPVTVPVSNQSSMQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHNTQLGAPSRKPDLRVITSQGGKGLMHHLTEDHLDLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLSSAELSSLPAFSSPAGLALGNVTAWQQPQQPQQAQPPQSQPHPQPQQPQQPPQQQPHLVPVSLSNLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPDPGEGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEADGSAVKRMRLDTWTLK
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534392..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548189))
location: region:534392-548189:-1
so has part: feature:548136-548189:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534392-534403:-1:exon

XP_005356946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548136-548189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534392-534403:-1:exon

Mef2d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mef2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRRYGSSVPAPNFAMPVTVPVSNQSSMQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHNTQLGAPSRKPDLRVITSQGGKGLMHHLTEDHLDLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLSSAELSSLPAFSSPAGLALGNVTAWQQPQQPQQAQPPQSQPHPQPQQPQQPPQQQPHLVPVSLSNLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPDPGEGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEADGSAVKRMRLDTWTLK
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534392..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548189))
location: region:534392-548189:-1
so has part: feature:548136-548189:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534392-534403:-1:exon

XP_013205277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548136-548189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534392-534403:-1:exon

Mef2d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mef2d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRRYGSSVPAPNFAMPVTVPVSNQSSMQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHNTQLGAPSRKPDLRVITSQGGKGLMHHLTEDHLDLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLSSAELSSLPAFSSPAGLALGNVTAWQQPQQPQQAQPPQSQPHPQPQQPQQPPQQQPHLVPVSLSNLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPDPGEGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEADGSAVKRMRLDTWTLK
SIO_010081: Mef2d
subclass of: SO_0000673
so part of: Mef2d
location: complement(join(534392..534403,534683..534989,535289..535499,540751..540880,542036..542056,542491..542681,544262..544318,544506..544716,545674..545811,547473..547676,548136..548189))
location: region:534392-548189:-1
so has part: feature:548136-548189:-1:exon
so has part: feature:547473-547676:-1:exon
so has part: feature:545674-545811:-1:exon
so has part: feature:544506-544716:-1:exon
so has part: feature:544262-544318:-1:exon
so has part: feature:542491-542681:-1:exon
so has part: feature:542036-542056:-1:exon
so has part: feature:540751-540880:-1:exon
so has part: feature:535289-535499:-1:exon
so has part: feature:534683-534989:-1:exon
so has part: feature:534392-534403:-1:exon

XP_013205278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548136-548189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547473-547676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545674-545811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544506-544716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544262-544318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542491-542681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542036-542056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540751-540880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535289-535499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534683-534989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534392-534403:-1:exon

Iqgap3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Iqgap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(577377..624085)
location: region:577377-624085:-1
so has part: feature:577377-624085:-1:exon
subclass of: SO_0000010

101990254
type: Gene
SIO_000068: ncbigene

position:577377:-1
position: 577377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624085:-1
position: 624085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577377-624085:-1:exon

Iqgap3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Iqgap3
product: IQ motif containing GTPase activating protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356891.3
SIO_010081: Iqgap3
subclass of: SO_0000673
so part of: Iqgap3
location: complement(join(577377..578229,581588..581696,582146..582247,582460..582626,582950..583162,583733..583820,585004..585130,585604..585706,585795..585927,586190..586422,586597..586681,588764..588904,591007..591231,591489..591652,592010..592162,592760..592968,598485..598554,598649..598720,598869..598952,601539..601709,601787..601926,602000..602167,602830..602920,604889..605052,605126..605247,606329..606486,607517..607680,610155..610242,610990..611153,611936..612014,612410..612588,612803..612916,613004..613071,613782..613858,616725..616802,617199..617355,621220..621307,624049..624085))
location: region:577377-624085:-1
so has part: feature:624049-624085:-1:exon
so has part: feature:621220-621307:-1:exon
so has part: feature:617199-617355:-1:exon
so has part: feature:616725-616802:-1:exon
so has part: feature:613782-613858:-1:exon
so has part: feature:613004-613071:-1:exon
so has part: feature:612803-612916:-1:exon
so has part: feature:612410-612588:-1:exon
so has part: feature:611936-612014:-1:exon
so has part: feature:610990-611153:-1:exon
so has part: feature:610155-610242:-1:exon
so has part: feature:607517-607680:-1:exon
so has part: feature:606329-606486:-1:exon
so has part: feature:605126-605247:-1:exon
so has part: feature:604889-605052:-1:exon
so has part: feature:602830-602920:-1:exon
so has part: feature:602000-602167:-1:exon
so has part: feature:601787-601926:-1:exon
so has part: feature:601539-601709:-1:exon
so has part: feature:598869-598952:-1:exon
so has part: feature:598649-598720:-1:exon
so has part: feature:598485-598554:-1:exon
so has part: feature:592760-592968:-1:exon
so has part: feature:592010-592162:-1:exon
so has part: feature:591489-591652:-1:exon
so has part: feature:591007-591231:-1:exon
so has part: feature:588764-588904:-1:exon
so has part: feature:586597-586681:-1:exon
so has part: feature:586190-586422:-1:exon
so has part: feature:585795-585927:-1:exon
so has part: feature:585604-585706:-1:exon
so has part: feature:585004-585130:-1:exon
so has part: feature:583733-583820:-1:exon
so has part: feature:582950-583162:-1:exon
so has part: feature:582460-582626:-1:exon
so has part: feature:582146-582247:-1:exon
so has part: feature:581588-581696:-1:exon
so has part: feature:577377-578229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624049-624085:-1:exon

position:624049:-1
position: 624049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621220-621307:-1:exon

position:621220:-1
position: 621220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621307:-1
position: 621307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617199-617355:-1:exon

position:617199:-1
position: 617199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617355:-1
position: 617355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:616725-616802:-1:exon

position:616725:-1
position: 616725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616802:-1
position: 616802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613782-613858:-1:exon

position:613782:-1
position: 613782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613858:-1
position: 613858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613004-613071:-1:exon

position:613004:-1
position: 613004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613071:-1
position: 613071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:612803-612916:-1:exon

position:612803:-1
position: 612803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612916:-1
position: 612916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:612410-612588:-1:exon

position:612410:-1
position: 612410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612588:-1
position: 612588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:611936-612014:-1:exon

position:611936:-1
position: 611936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612014:-1
position: 612014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:610990-611153:-1:exon

position:610990:-1
position: 610990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611153:-1
position: 611153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:610155-610242:-1:exon

position:610155:-1
position: 610155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610242:-1
position: 610242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:607517-607680:-1:exon

position:607517:-1
position: 607517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607680:-1
position: 607680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:606329-606486:-1:exon

position:606329:-1
position: 606329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606486:-1
position: 606486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:605126-605247:-1:exon

position:605126:-1
position: 605126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605247:-1
position: 605247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:604889-605052:-1:exon

position:604889:-1
position: 604889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605052:-1
position: 605052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:602830-602920:-1:exon

position:602830:-1
position: 602830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602920:-1
position: 602920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:602000-602167:-1:exon

position:602000:-1
position: 602000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602167:-1
position: 602167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:601787-601926:-1:exon

position:601787:-1
position: 601787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601926:-1
position: 601926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:601539-601709:-1:exon

position:601539:-1
position: 601539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601709:-1
position: 601709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:598869-598952:-1:exon

position:598869:-1
position: 598869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598952:-1
position: 598952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:598649-598720:-1:exon

position:598649:-1
position: 598649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598720:-1
position: 598720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:598485-598554:-1:exon

position:598485:-1
position: 598485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598554:-1
position: 598554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:592760-592968:-1:exon

position:592760:-1
position: 592760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592968:-1
position: 592968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:592010-592162:-1:exon

position:592010:-1
position: 592010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592162:-1
position: 592162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:591489-591652:-1:exon

position:591489:-1
position: 591489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591652:-1
position: 591652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:591007-591231:-1:exon

position:591007:-1
position: 591007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591231:-1
position: 591231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:588764-588904:-1:exon

position:588764:-1
position: 588764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588904:-1
position: 588904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:586597-586681:-1:exon

position:586597:-1
position: 586597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586681:-1
position: 586681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:586190-586422:-1:exon

position:586190:-1
position: 586190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586422:-1
position: 586422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:585795-585927:-1:exon

position:585795:-1
position: 585795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585927:-1
position: 585927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:585604-585706:-1:exon

position:585604:-1
position: 585604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585706:-1
position: 585706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:585004-585130:-1:exon

position:585004:-1
position: 585004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585130:-1
position: 585130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:583733-583820:-1:exon

position:583733:-1
position: 583733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583820:-1
position: 583820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:582950-583162:-1:exon

position:582950:-1
position: 582950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583162:-1
position: 583162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:582460-582626:-1:exon

position:582460:-1
position: 582460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582626:-1
position: 582626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:582146-582247:-1:exon

position:582146:-1
position: 582146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582247:-1
position: 582247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:581588-581696:-1:exon

position:581588:-1
position: 581588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581696:-1
position: 581696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:577377-578229:-1:exon

position:578229:-1
position: 578229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Iqgap3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Iqgap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3
translation: MEPCAAGRARTAYERLTAEEMDEQRRQNVAYQYLCRLEEAKRWMEVCLKEELPSPVELEESLRNGVLLAKLGHCFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAVAHIGLPSIFLPETTDVYDKKNMPRVIYCIHALSLFLFRLGLAPQIHDLYGKVEFTAEELSNIASELAKYGLQLPAFSKIGGILANEFSADEAAVHAAVLAINDAVERGMVEDTLAALKNPNALLENIREPLAAVYQELLALAKVEKAANARNHDDGQEQDIYESCLTQAEIQGHINLANVQGALEVVDDALERQSPGALLEALQDPVLALQGVRRDLADWYLEQLSSDREQKSQELGLVRLLEKEEIQAGVAAANEKGDREQAMLQAVWRINRAIQREVASDTVKELMCPEAQLPQVYPFASAVYQQELAVLQKQQQGELGQEELFVAVEMLSAVVLINRALEARDTCAFWSSLVNPATGLAQVEEENAQRYFDALVKVRKLRATDRAFLSWNDLQAAVCEVNAQVQEETDQVLAISLINEALDQGYPEKTLSALLLPAAGLEDVSLHVAPRYHLLLVAAKRKKAKVTGDPGAVLWLEEIRQGVARANEDTSTAQRTALGVAAINQAIKEGKAAQTERVLRNPNVALRGIVPDCADSYQQALEGAVSKKRRPGDTAFWVRHDMKDGSAYYFHLQTFQGTWDHPPSCHLNTSHLTWEEIQSVITKVSAAHDRQLLWKANVGFVIQLQARLRGFLVRQKFAECSHFLRTLLPAIIKIQAHWRGYRQRKTYQERLQYFKANMDAIIKIQAWVRMWAARRQYLRRLRYFQKNVDSIVKIQAFFRARKVRDDYRMLVHTRHPPLSVVRKFAHLLNQSQEDFSAEAELLKLQEEVVRKIRSNQQLEQDLNLMDIKIGLLVKNRITLQDVVSHCKKLTKKNKEQLSDMMILDKQKGLKSLSREKRQKLEAYQHLFYLLQTQPMYLAKLIFQMPQNRTTKFMEAVVFSLYSYASNRREAYLLLQLFKTALQEEVRSKVEQPQDVVTGNPTVVRLVVRFYRNGRGQSALQEILGKVVKDVLEDRSVSIHTDPVHIYKNWINQMEAQTGQRSCLPYDVTPEQALSHSEVQRRLDISLRNLLAMTDKFFVAISSSVDHIPYGMRYMAKVLKTALEKKFPSATESEVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGSTMATPQRHALGAVAQLLQHAAAGKTFSGESQHLRVLNGYLEDMHLKFRKFIYRACQVPEPEERFSIDEYSDMVAVAKPVVYITVGELISTHRLLLEHQDQLAPDHQDPLHQLLEDLGEPPSISELMGENTATDGQVDQSRLEVSLTLTNKFEGLEADADHTSNQSLLLGTKQMLADLIQFHPGDSLEEILSSSAPREQEEAHHLLMCWRQARDTQKPESLRRHHSMMAHSLLPLADKQRRVLRNLRRLQGLGLVRASDCYQGLVDELAKDICNQRRQRQRRRAEILRLRATLKGLEAKTTFYEEQGDYYSQYIQACLDHLAPRAKSSGKGKKQPCLHYTAAQLLEKGVLLEIEDLPVSHFRNVIFDIIPGDEAGRFAVNAKFLGVDMEQFQLHYQDLLQLQYEGVAVMKLFNKAKVNVNLLIFLLNKKFLRK
SIO_010081: Iqgap3
subclass of: SO_0000673
so part of: Iqgap3
location: complement(join(578116..578229,581588..581696,582146..582247,582460..582626,582950..583162,583733..583820,585004..585130,585604..585706,585795..585927,586190..586422,586597..586681,588764..588904,591007..591231,591489..591652,592010..592162,592760..592968,598485..598554,598649..598720,598869..598952,601539..601709,601787..601926,602000..602167,602830..602920,604889..605052,605126..605247,606329..606486,607517..607680,610155..610242,610990..611153,611936..612014,612410..612588,612803..612916,613004..613071,613782..613858,616725..616802,617199..617355,621220..621307,624049..624085))
location: region:578116-624085:-1
so has part: feature:624049-624085:-1:exon
so has part: feature:621220-621307:-1:exon
so has part: feature:617199-617355:-1:exon
so has part: feature:616725-616802:-1:exon
so has part: feature:613782-613858:-1:exon
so has part: feature:613004-613071:-1:exon
so has part: feature:612803-612916:-1:exon
so has part: feature:612410-612588:-1:exon
so has part: feature:611936-612014:-1:exon
so has part: feature:610990-611153:-1:exon
so has part: feature:610155-610242:-1:exon
so has part: feature:607517-607680:-1:exon
so has part: feature:606329-606486:-1:exon
so has part: feature:605126-605247:-1:exon
so has part: feature:604889-605052:-1:exon
so has part: feature:602830-602920:-1:exon
so has part: feature:602000-602167:-1:exon
so has part: feature:601787-601926:-1:exon
so has part: feature:601539-601709:-1:exon
so has part: feature:598869-598952:-1:exon
so has part: feature:598649-598720:-1:exon
so has part: feature:598485-598554:-1:exon
so has part: feature:592760-592968:-1:exon
so has part: feature:592010-592162:-1:exon
so has part: feature:591489-591652:-1:exon
so has part: feature:591007-591231:-1:exon
so has part: feature:588764-588904:-1:exon
so has part: feature:586597-586681:-1:exon
so has part: feature:586190-586422:-1:exon
so has part: feature:585795-585927:-1:exon
so has part: feature:585604-585706:-1:exon
so has part: feature:585004-585130:-1:exon
so has part: feature:583733-583820:-1:exon
so has part: feature:582950-583162:-1:exon
so has part: feature:582460-582626:-1:exon
so has part: feature:582146-582247:-1:exon
so has part: feature:581588-581696:-1:exon
so has part: feature:578116-578229:-1:exon

XP_005356948.1
type: Protein
SIO_000068: ncbiprotein

position:578116:-1
position: 578116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624049-624085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621220-621307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617199-617355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616725-616802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613782-613858:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613004-613071:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612803-612916:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:612410-612588:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611936-612014:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:610990-611153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610155-610242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607517-607680:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606329-606486:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605126-605247:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:604889-605052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:602830-602920:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:602000-602167:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:601787-601926:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:601539-601709:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:598869-598952:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:598649-598720:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:598485-598554:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592760-592968:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:592010-592162:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:591489-591652:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:591007-591231:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:588764-588904:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586597-586681:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:586190-586422:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:585795-585927:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:585604-585706:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:585004-585130:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:583733-583820:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:582950-583162:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:582460-582626:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:582146-582247:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:581588-581696:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:578116-578229:-1:exon

Ttc24
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ttc24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633546..642752
location: region:633546-642752:1
so has part: feature:633546-642752:1:exon
subclass of: SO_0000010

102001366
type: Gene
SIO_000068: ncbigene

position:633546:1
position: 633546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642752:1
position: 642752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633546-642752:1:exon

Ttc24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ttc24
product: tetratricopeptide repeat domain 24
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_013349804.1
SIO_010081: Ttc24
subclass of: SO_0000673
so part of: Ttc24
location: join(633546..633612,633919..633954,634099..634302,635752..635931,636048..636142,636446..636544,636901..637025,641330..641423,642357..642446,642734..642752)
location: region:633546-642752:1
so has part: feature:633546-633612:1:exon
so has part: feature:633919-633954:1:exon
so has part: feature:634099-634302:1:exon
so has part: feature:635752-635931:1:exon
so has part: feature:636048-636142:1:exon
so has part: feature:636446-636544:1:exon
so has part: feature:636901-637025:1:exon
so has part: feature:641330-641423:1:exon
so has part: feature:642357-642446:1:exon
so has part: feature:642734-642752:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633546-633612:1:exon

position:633612:1
position: 633612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633919-633954:1:exon

position:633919:1
position: 633919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633954:1
position: 633954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634099-634302:1:exon

position:634099:1
position: 634099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634302:1
position: 634302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635752-635931:1:exon

position:635752:1
position: 635752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635931:1
position: 635931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:636048-636142:1:exon

position:636048:1
position: 636048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636142:1
position: 636142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:636446-636544:1:exon

position:636446:1
position: 636446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636544:1
position: 636544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:636901-637025:1:exon

position:636901:1
position: 636901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637025:1
position: 637025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:641330-641423:1:exon

position:641330:1
position: 641330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641423:1
position: 641423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:642357-642446:1:exon

position:642357:1
position: 642357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642446:1
position: 642446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:642734-642752:1:exon

position:642734:1
position: 642734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ttc24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ttc24
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 24
translation: MLSSGQRGLSEALQVLHALEEHSDADQSTAQGLLGLLYNDLGMAHFQLQLFPLAVEAFLQALPWCQQPADQATVFQNLGVTCNILGHYQEAKEFHQKVAKLYGYPCPSSQAPIQMDAFWFQARRSLGCLAFSLSQLEDHRAAWDSYFHVLQLPKRLVRMGGFRQACDGLGAASARLGQHDQAVKYCKRAQAQCQHEPGSVRERLVARLMGARRAFLAQERLAQAHILFPSTGPPNAFLRRKFTPTPRTDLSAWSILLLTKAEVPPYNFLWEDEEPEEGHEEKEVEGLVNMTXLVEPQRQDRATVHLPSGGLSPSXVEHPIITAPHKLQVDRPLCLC
SIO_010081: Ttc24
subclass of: SO_0000673
so part of: Ttc24
location: join(633546..633612,633919..633954,634099..634302,635752..635931,636048..636142,636446..636544,636901..637025,641330..641423,642357..642446,642734..642752)
location: region:633546-642752:1
so has part: feature:633546-633612:1:exon
so has part: feature:633919-633954:1:exon
so has part: feature:634099-634302:1:exon
so has part: feature:635752-635931:1:exon
so has part: feature:636048-636142:1:exon
so has part: feature:636446-636544:1:exon
so has part: feature:636901-637025:1:exon
so has part: feature:641330-641423:1:exon
so has part: feature:642357-642446:1:exon
so has part: feature:642734-642752:1:exon

XP_013205258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:633546-633612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633919-633954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634099-634302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635752-635931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636048-636142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636446-636544:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636901-637025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:641330-641423:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:642357-642446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:642734-642752:1:exon

Naxe
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Naxe
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 655686..658330
location: region:655686-658330:1
so has part: feature:655686-658330:1:exon
subclass of: SO_0000010

101990821
type: Gene
SIO_000068: ncbigene

position:655686:1
position: 655686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658330:1
position: 658330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655686-658330:1:exon

Naxe
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Naxe
product: NAD(P)HX epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_005356893.3
SIO_010081: Naxe
subclass of: SO_0000673
so part of: Naxe
location: join(655686..656487,656576..656684,656788..656898,656981..657094,657716..657863,658079..658330)
location: region:655686-658330:1
so has part: feature:655686-656487:1:exon
so has part: feature:656576-656684:1:exon
so has part: feature:656788-656898:1:exon
so has part: feature:656981-657094:1:exon
so has part: feature:657716-657863:1:exon
so has part: feature:658079-658330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655686-656487:1:exon

position:656487:1
position: 656487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656576-656684:1:exon

position:656576:1
position: 656576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656684:1
position: 656684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656788-656898:1:exon

position:656788:1
position: 656788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656898:1
position: 656898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:656981-657094:1:exon

position:656981:1
position: 656981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657094:1
position: 657094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:657716-657863:1:exon

position:657716:1
position: 657716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657863:1
position: 657863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658079-658330:1:exon

position:658079:1
position: 658079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Naxe
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Naxe
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase
translation: MSGGTKVRGTPGTRNLRLDANGAGGRGAAGRAHAPAGRSAACRMSGLRALLGVGLLVAGSRLPRIASQQGVCLAGPAWWGTPRRGSETMASAAVKYLSQEEARAVDEELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSKSPPTVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPFLSEMPPEPMMVDELYELVVDAIFGFSFKGDVREPFHSILSVLSGLTVPIASIDIPSGWDVEKGNPGGIQPDLLISLTAPKKSAAHFTGRYHYLGGRFVPPALEKKYQLNLPSYPDTECVYRLQ
SIO_010081: Naxe
subclass of: SO_0000673
so part of: Naxe
location: join(656195..656487,656576..656684,656788..656898,656981..657094,657716..657863,658079..658281)
location: region:656195-658281:1
so has part: feature:656195-656487:1:exon
so has part: feature:656576-656684:1:exon
so has part: feature:656788-656898:1:exon
so has part: feature:656981-657094:1:exon
so has part: feature:657716-657863:1:exon
so has part: feature:658079-658281:1:exon

XP_005356950.3
type: Protein
SIO_000068: ncbiprotein

position:656195:1
position: 656195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658281:1
position: 658281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656195-656487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656576-656684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656788-656898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656981-657094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657716-657863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658079-658281:1:exon

Hapln2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 656613..690314
location: region:656613-690314:1
so has part: feature:656613-690314:1:exon
subclass of: SO_0000010

101991110
type: Gene
SIO_000068: ncbigene

position:656613:1
position: 656613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690314:1
position: 690314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656613-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_026784127.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(656613..656684,685354..685648,688264..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:656613-690314:1
so has part: feature:656613-656684:1:exon
so has part: feature:685354-685648:1:exon
so has part: feature:688264-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656613-656684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685648:1:exon

position:685354:1
position: 685354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685648:1
position: 685648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:688264-688405:1:exon

position:688264:1
position: 688264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688405:1
position: 688405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:688631-688984:1:exon

position:688631:1
position: 688631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688984:1
position: 688984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:689108-689224:1:exon

position:689108:1
position: 689108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689224:1
position: 689224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:689339-689521:1:exon

position:689339:1
position: 689339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689521:1
position: 689521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:689912-690314:1:exon

position:689912:1
position: 689912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gpatch4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gpatch4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(658417..682039)
location: region:658417-682039:-1
so has part: feature:658417-682039:-1:exon
subclass of: SO_0000010

101990535
type: Gene
SIO_000068: ncbigene

position:658417:-1
position: 658417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682039:-1
position: 682039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658417-682039:-1:exon

Gpatch4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gpatch4
product: G-patch domain containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784124.1
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(658417..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..663951,669200..669284,680486..680661,681851..682039))
location: region:658417-682039:-1
so has part: feature:681851-682039:-1:exon
so has part: feature:680486-680661:-1:exon
so has part: feature:669200-669284:-1:exon
so has part: feature:663820-663951:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:658417-659840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681851-682039:-1:exon

position:681851:-1
position: 681851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680486-680661:-1:exon

position:680486:-1
position: 680486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680661:-1
position: 680661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:669200-669284:-1:exon

position:669200:-1
position: 669200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669284:-1
position: 669284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:663820-663951:-1:exon

position:663820:-1
position: 663820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663951:-1
position: 663951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:663346-663419:-1:exon

position:663346:-1
position: 663346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663419:-1
position: 663419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:663157-663249:-1:exon

position:663157:-1
position: 663157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663249:-1
position: 663249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:662976-663062:-1:exon

position:662976:-1
position: 662976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663062:-1
position: 663062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:660337-660419:-1:exon

position:660337:-1
position: 660337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660419:-1
position: 660419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:660028-660078:-1:exon

position:660028:-1
position: 660028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660078:-1
position: 660078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:658417-659840:-1:exon

position:659840:-1
position: 659840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gpatch4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gpatch4
product: G-patch domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026784123.1
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(658417..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..663951,669200..669284,680486..680957))
location: region:658417-680957:-1
so has part: feature:680486-680957:-1:exon
so has part: feature:669200-669284:-1:exon
so has part: feature:663820-663951:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:658417-659840:-1:exon

position:680957:-1
position: 680957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680486-680957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669200-669284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663820-663951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663346-663419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:658417-659840:-1:exon

Gpatch4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gpatch4
product: G-patch domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005356892.3
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(658417..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..663951,669200..670070))
location: region:658417-670070:-1
so has part: feature:669200-670070:-1:exon
so has part: feature:663820-663951:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:658417-659840:-1:exon

position:670070:-1
position: 670070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669200-670070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663820-663951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663346-663419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658417-659840:-1:exon

Gpatch4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gpatch4
product: G-patch domain containing 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_026784125.1
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(658417..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..664188))
location: region:658417-664188:-1
so has part: feature:663820-664188:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:658417-659840:-1:exon

position:664188:-1
position: 664188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663820-664188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663346-663419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658417-659840:-1:exon

Gpatch4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gpatch4
product: G-patch domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_026784122.1
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(658417..659840,660028..660078,660337..660419,663157..663249,663346..663901))
location: region:658417-663901:-1
so has part: feature:663346-663901:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:658417-659840:-1:exon

position:663901:-1
position: 663901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663346-663901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658417-659840:-1:exon

Gpatch4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gpatch4
product: G-patch domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_026784121.1
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(658417..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663901))
location: region:658417-663901:-1
so has part: feature:663346-663901:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:658417-659840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663346-663901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658417-659840:-1:exon

Gpatch4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gpatch4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X3
translation: MSVTPKVKSRGMKFAEEQLLKHGWTEGKGLGRNENGITQALKVTLKQDTHGVGHDPAKEFTNHWWSDLFNKTAASLVVDTGKDGVQIRRLSTENTQRNHPKPNLLYQKFVKTATLTSGEEKPDRASSSDDSHEPLPPKILTDEMLLKACKGRTAHKAARIGITMKAKLARLEAQEQAFLARFKGSEDVGTSQPQTDREPSRKKKKKRKQREEEEAVTPEKNVGEALLEYTDQSVKKSRKKKRRRKEEKEGMAVGSEEEEAEGESGPGELSTVQSDQSSRKKKKKRRQHHEEEGGMDVCDKGGRNVTGRPKAVDSGVGTDPWRSSKTLQHCGEDLDTQDEEGKDGLTKRERKVRRGKKKRQKCLEEVVLDVSDKDDDGRTWEVENEGERSQAHPKERAGINTDQRAKKKKKQKRDRRSPVQPC
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(659039..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..663898))
location: region:659039-663898:-1
so has part: feature:663820-663898:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:659039-659840:-1:exon

XP_026639924.1
type: Protein
SIO_000068: ncbiprotein

position:659039:-1
position: 659039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663898:-1
position: 663898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663820-663898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663346-663419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659039-659840:-1:exon

Gpatch4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gpatch4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X3
translation: MSVTPKVKSRGMKFAEEQLLKHGWTEGKGLGRNENGITQALKVTLKQDTHGVGHDPAKEFTNHWWSDLFNKTAASLVVDTGKDGVQIRRLSTENTQRNHPKPNLLYQKFVKTATLTSGEEKPDRASSSDDSHEPLPPKILTDEMLLKACKGRTAHKAARIGITMKAKLARLEAQEQAFLARFKGSEDVGTSQPQTDREPSRKKKKKRKQREEEEAVTPEKNVGEALLEYTDQSVKKSRKKKRRRKEEKEGMAVGSEEEEAEGESGPGELSTVQSDQSSRKKKKKRRQHHEEEGGMDVCDKGGRNVTGRPKAVDSGVGTDPWRSSKTLQHCGEDLDTQDEEGKDGLTKRERKVRRGKKKRQKCLEEVVLDVSDKDDDGRTWEVENEGERSQAHPKERAGINTDQRAKKKKKQKRDRRSPVQPC
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(659039..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..663898))
location: region:659039-663898:-1
so has part: feature:663820-663898:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:659039-659840:-1:exon

XP_026639925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663820-663898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663346-663419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659039-659840:-1:exon

Gpatch4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gpatch4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X3
translation: MSVTPKVKSRGMKFAEEQLLKHGWTEGKGLGRNENGITQALKVTLKQDTHGVGHDPAKEFTNHWWSDLFNKTAASLVVDTGKDGVQIRRLSTENTQRNHPKPNLLYQKFVKTATLTSGEEKPDRASSSDDSHEPLPPKILTDEMLLKACKGRTAHKAARIGITMKAKLARLEAQEQAFLARFKGSEDVGTSQPQTDREPSRKKKKKRKQREEEEAVTPEKNVGEALLEYTDQSVKKSRKKKRRRKEEKEGMAVGSEEEEAEGESGPGELSTVQSDQSSRKKKKKRRQHHEEEGGMDVCDKGGRNVTGRPKAVDSGVGTDPWRSSKTLQHCGEDLDTQDEEGKDGLTKRERKVRRGKKKRQKCLEEVVLDVSDKDDDGRTWEVENEGERSQAHPKERAGINTDQRAKKKKKQKRDRRSPVQPC
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(659039..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..663898))
location: region:659039-663898:-1
so has part: feature:663820-663898:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:659039-659840:-1:exon

XP_026639926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663820-663898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663346-663419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659039-659840:-1:exon

Gpatch4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gpatch4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X3
translation: MSVTPKVKSRGMKFAEEQLLKHGWTEGKGLGRNENGITQALKVTLKQDTHGVGHDPAKEFTNHWWSDLFNKTAASLVVDTGKDGVQIRRLSTENTQRNHPKPNLLYQKFVKTATLTSGEEKPDRASSSDDSHEPLPPKILTDEMLLKACKGRTAHKAARIGITMKAKLARLEAQEQAFLARFKGSEDVGTSQPQTDREPSRKKKKKRKQREEEEAVTPEKNVGEALLEYTDQSVKKSRKKKRRRKEEKEGMAVGSEEEEAEGESGPGELSTVQSDQSSRKKKKKRRQHHEEEGGMDVCDKGGRNVTGRPKAVDSGVGTDPWRSSKTLQHCGEDLDTQDEEGKDGLTKRERKVRRGKKKRQKCLEEVVLDVSDKDDDGRTWEVENEGERSQAHPKERAGINTDQRAKKKKKQKRDRRSPVQPC
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(659039..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663419,663820..663898))
location: region:659039-663898:-1
so has part: feature:663820-663898:-1:exon
so has part: feature:663346-663419:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:659039-659840:-1:exon

XP_005356949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663820-663898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663346-663419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659039-659840:-1:exon

Gpatch4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gpatch4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X2
translation: MGDNEVQIVGQIGGGSRNTTGEDHPGSDGGTCGWHSVRKNGVRRLVKVHGNPVVSERHGSWPRRTCCGLKASCKINHSLSSAGKGLGRNENGITQALKVTLKQDTHGVGHDPAKEFTNHWWSDLFNKTAASLVVDTGKTATLTSGEEKPDRASSSDDSHEPLPPKILTDEMLLKACKGRTAHKAARIGITMKAKLARLEAQEQAFLARFKGSEDVGTSQPQTDREPSRKKKKKRKQREEEEAVTPEKNVGEALLEYTDQSVKKSRKKKRRRKEEKEGMAVGSEEEEAEGESGPGELSTVQSDQSSRKKKKKRRQHHEEEGGMDVCDKGGRNVTGRPKAVDSGVGTDPWRSSKTLQHCGEDLDTQDEEGKDGLTKRERKVRRGKKKRQKCLEEVVLDVSDKDDDGRTWEVENEGERSQAHPKERAGINTDQRAKKKKKQKRDRRSPVQPC
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(659039..659840,660028..660078,660337..660419,663157..663249,663346..663666))
location: region:659039-663666:-1
so has part: feature:663346-663666:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:659039-659840:-1:exon

XP_026639923.1
type: Protein
SIO_000068: ncbiprotein

position:663666:-1
position: 663666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663346-663666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659039-659840:-1:exon

Gpatch4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gpatch4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X1
translation: MGDNEVQIVGQIGGGSRNTTGEDHPGSDGGTCGWHSVRKNGVRRLVKVHGNPVVSERHGSWPRRTCCGLKASCKINHSLSSAGKGLGRNENGITQALKVTLKQDTHGVGHDPAKEFTNHWWSDLFNKTAASLVVDTGKDGVQIRRLSTENTQRNHPKPNLLYQKFVKTATLTSGEEKPDRASSSDDSHEPLPPKILTDEMLLKACKGRTAHKAARIGITMKAKLARLEAQEQAFLARFKGSEDVGTSQPQTDREPSRKKKKKRKQREEEEAVTPEKNVGEALLEYTDQSVKKSRKKKRRRKEEKEGMAVGSEEEEAEGESGPGELSTVQSDQSSRKKKKKRRQHHEEEGGMDVCDKGGRNVTGRPKAVDSGVGTDPWRSSKTLQHCGEDLDTQDEEGKDGLTKRERKVRRGKKKRQKCLEEVVLDVSDKDDDGRTWEVENEGERSQAHPKERAGINTDQRAKKKKKQKRDRRSPVQPC
SIO_010081: Gpatch4
subclass of: SO_0000673
so part of: Gpatch4
location: complement(join(659039..659840,660028..660078,660337..660419,662976..663062,663157..663249,663346..663666))
location: region:659039-663666:-1
so has part: feature:663346-663666:-1:exon
so has part: feature:663157-663249:-1:exon
so has part: feature:662976-663062:-1:exon
so has part: feature:660337-660419:-1:exon
so has part: feature:660028-660078:-1:exon
so has part: feature:659039-659840:-1:exon

XP_026639922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663346-663666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663157-663249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662976-663062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660337-660419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660028-660078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659039-659840:-1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_013349821.2
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685648,688264..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685648:1:exon
so has part: feature:688264-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

position:685046:1
position: 685046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

position:685163:1
position: 685163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688264-688405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026784128.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685463,685591..685648,688264..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685463:1:exon
so has part: feature:685591-685648:1:exon
so has part: feature:688264-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685463:1:exon

position:685463:1
position: 685463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685591-685648:1:exon

position:685591:1
position: 685591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:688264-688405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026784132.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685463,685591..685648,688297..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685463:1:exon
so has part: feature:685591-685648:1:exon
so has part: feature:688297-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685591-685648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688297-688405:1:exon

position:688297:1
position: 688297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_026784129.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685463,685594..685648,688264..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685463:1:exon
so has part: feature:685594-685648:1:exon
so has part: feature:688264-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685594-685648:1:exon

position:685594:1
position: 685594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:688264-688405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_026784134.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685463,685594..685648,688297..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685463:1:exon
so has part: feature:685594-685648:1:exon
so has part: feature:688297-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685594-685648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688297-688405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_026784131.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685429,685591..685648,688264..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685429:1:exon
so has part: feature:685591-685648:1:exon
so has part: feature:688264-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685429:1:exon

position:685429:1
position: 685429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685591-685648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688264-688405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_026784135.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685429,685591..685648,688297..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685429:1:exon
so has part: feature:685591-685648:1:exon
so has part: feature:688297-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685591-685648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688297-688405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_026784130.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685429,685594..685648,688264..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685429:1:exon
so has part: feature:685594-685648:1:exon
so has part: feature:688264-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685594-685648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688264-688405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_026784133.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685429,685594..685648,688297..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685429:1:exon
so has part: feature:685594-685648:1:exon
so has part: feature:688297-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685594-685648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688297-688405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_013349822.2
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(685046..685163,685354..685429,688297..688405,688631..688984,689108..689224,689339..689521,689912..690314)
location: region:685046-690314:1
so has part: feature:685046-685163:1:exon
so has part: feature:685354-685429:1:exon
so has part: feature:688297-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685046-685163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685354-685429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688297-688405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639928.1
type: Protein
SIO_000068: ncbiprotein

position:688318:1
position: 688318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690195:1
position: 690195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_013205275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X2
translation: MPSRIPLQALCCVLVPWAFTTFHQALGNPAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688318..688405,688631..688984,689108..689224,689339..689521,689912..690195)
location: region:688318-690195:1
so has part: feature:688318-688405:1:exon
so has part: feature:688631-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_013205276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688318-688405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688631-688984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689912-690195:1:exon

Hapln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hapln2
product: hyaluronan and proteoglycan link protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_026784126.1
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688323..688984,689108..689224,689339..689521,689912..690314)
location: region:688323-690314:1
so has part: feature:688323-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690314:1:exon

position:688323:1
position: 688323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688323-688984:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689912-690314:1:exon

Hapln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hapln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2 isoform X1
translation: MRKGEGGASEPPGKLLGTRSEWALGAGRIRGLPLWPLCSAPHPGPHYLLLPIHEVIHSRRGATATLPCVLGTSPPSYKVRWSKVEPGELRETIILITNGLHARGYGHLGGRASMRRGHRLDASLVIKNVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLNARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDRCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEK
SIO_010081: Hapln2
subclass of: SO_0000673
so part of: Hapln2
location: join(688513..688984,689108..689224,689339..689521,689912..690195)
location: region:688513-690195:1
so has part: feature:688513-688984:1:exon
so has part: feature:689108-689224:1:exon
so has part: feature:689339-689521:1:exon
so has part: feature:689912-690195:1:exon

XP_026639927.1
type: Protein
SIO_000068: ncbiprotein

position:688513:1
position: 688513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688513-688984:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689108-689224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689339-689521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689912-690195:1:exon

Bcan
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Bcan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 758451..770692
location: region:758451-770692:1
so has part: feature:758451-770692:1:exon
subclass of: SO_0000010

101991944
type: Gene
SIO_000068: ncbigene

position:758451:1
position: 758451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770692:1
position: 770692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758451-770692:1:exon

Bcan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bcan
product: brevican, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005356900.2
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(758451..758766,760835..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764778..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769951,770244..770692)
location: region:758451-770692:1
so has part: feature:758451-758766:1:exon
so has part: feature:760835-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764778-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769951:1:exon
so has part: feature:770244-770692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758451-758766:1:exon

position:758766:1
position: 758766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760835-760942:1:exon

position:760835:1
position: 760835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760942:1
position: 760942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761324-761695:1:exon

position:761324:1
position: 761324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761695:1
position: 761695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761953-762127:1:exon

position:761953:1
position: 761953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762127:1
position: 762127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:762320-762447:1:exon

position:762320:1
position: 762320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762447:1
position: 762447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:762795-763088:1:exon

position:762795:1
position: 762795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763088:1
position: 763088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:764073-764297:1:exon

position:764073:1
position: 764073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764297:1
position: 764297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:764778-765344:1:exon

position:764778:1
position: 764778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765344:1
position: 765344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:767605-767712:1:exon

position:767605:1
position: 767605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767712:1
position: 767712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:768075-768233:1:exon

position:768075:1
position: 768075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768233:1
position: 768233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:769034-769116:1:exon

position:769034:1
position: 769034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769116:1
position: 769116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:769361-769505:1:exon

position:769361:1
position: 769361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769505:1
position: 769505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:769740-769951:1:exon

position:769740:1
position: 769740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769951:1
position: 769951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:770244-770692:1:exon

position:770244:1
position: 770244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Bcan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bcan
product: brevican, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026784032.1
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(760063..760192,760835..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764820..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769951,770244..770692)
location: region:760063-770692:1
so has part: feature:760063-760192:1:exon
so has part: feature:760835-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764820-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769951:1:exon
so has part: feature:770244-770692:1:exon

position:760063:1
position: 760063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760063-760192:1:exon

position:760192:1
position: 760192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760835-760942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761324-761695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761953-762127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762320-762447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762795-763088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764073-764297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764820-765344:1:exon

position:764820:1
position: 764820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:767605-767712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768075-768233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769034-769116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769361-769505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769740-769951:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:770244-770692:1:exon

Bcan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bcan
product: brevican, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005356898.3
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(760068..760192,760835..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764778..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769951,770244..770692)
location: region:760068-770692:1
so has part: feature:760068-760192:1:exon
so has part: feature:760835-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764778-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769951:1:exon
so has part: feature:770244-770692:1:exon

position:760068:1
position: 760068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760068-760192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760835-760942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761324-761695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761953-762127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762320-762447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762795-763088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764073-764297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764778-765344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767605-767712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768075-768233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769034-769116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769361-769505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769740-769951:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:770244-770692:1:exon

Bcan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bcan
product: brevican, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005356899.3
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(760070..760192,760835..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764778..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769930,770244..770691)
location: region:760070-770691:1
so has part: feature:760070-760192:1:exon
so has part: feature:760835-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764778-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769930:1:exon
so has part: feature:770244-770691:1:exon

position:760070:1
position: 760070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770691:1
position: 770691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760070-760192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760835-760942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761324-761695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761953-762127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762320-762447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762795-763088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764073-764297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764778-765344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767605-767712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768075-768233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769034-769116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769361-769505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769740-769930:1:exon

position:769930:1
position: 769930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:770244-770691:1:exon

Bcan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bcan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X1
translation: MWLPEPEVRPSVCSMIPLLSLLAALVLTQAPAVLADDLKEDSSEDRAFRVRIGATQLRGVLGGALTIPCHVHHLRPLTSRRAVPGFPRVKWTFLAGDREAEVLVARGLRVKVNEAYRFRVALPTYPASLTDVSLVLSELRPNDSGVYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFAGAQEACARIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQNPREACYGDMDGYPGVRNYGVVGPEDLYDVYCYAEDLNGELFLGAPPGKLTWEEARDYCLERGAQIASTGQLYAAWNGGLDRCSPGWLADGSVRYPIITPSQRCGGGLPGVKTLFLFPNQTGFPSKQNRFNVYCFRDSAHPSASSEASSPASDGLEAIVTVTEKLEELQLPREVMESESRGAIYSIPVMEDGAGGSSSSPEDPSEAPGILLESETQSIAPPTRSSEEEIVLEEEERYKDTEAPEEEKEQEDLWVWPRELSSPLPTDLETEHSLSRVSPPAGAVLQLGASPSPRPPRVHGPPTETFLPPREGSLTSTPDGAREVAGETGSRELSGVLRESEETGSSSLEDGPSLLPTTWAPEGTRELETPSGEKSGRPVQAQPVLPTDSASRGGVAVAPSSGDCIPSPCHNGGTCLEEKEGFRCLCLPGYGGDLCDVGLQFCSPGWEAFQGACYKHFSTRRSWEDAESQCRALGAHLTSICTPEEQDFVNDRYREYQWIGLNDRTIEGDFLWSDGTPVLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPQLPLAQIFGRPRLRYAVDSVLRYQCREGLAQRNLPLIRCQENGLWEAPQISCVPRRPVSDKRKQARALHSGDTPERPLGQLPRPRKALLTPPSSL
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(760171..760192,760835..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764778..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769951,770244..770339)
location: region:760171-770339:1
so has part: feature:760171-760192:1:exon
so has part: feature:760835-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764778-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769951:1:exon
so has part: feature:770244-770339:1:exon

XP_005356955.1
type: Protein
SIO_000068: ncbiprotein

position:760171:1
position: 760171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770339:1
position: 770339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760171-760192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760835-760942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761324-761695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761953-762127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762320-762447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762795-763088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764073-764297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764778-765344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767605-767712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768075-768233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769034-769116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769361-769505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769740-769951:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:770244-770339:1:exon

Bcan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bcan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X2
translation: MWLPEPEVRPSVCSMIPLLSLLAALVLTQAPAVLADDLKEDSSEDRAFRVRIGATQLRGVLGGALTIPCHVHHLRPLTSRRAVPGFPRVKWTFLAGDREAEVLVARGLRVKVNEAYRFRVALPTYPASLTDVSLVLSELRPNDSGVYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFAGAQEACARIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQNPREACYGDMDGYPGVRNYGVVGPEDLYDVYCYAEDLNGELFLGAPPGKLTWEEARDYCLERGAQIASTGQLYAAWNGGLDRCSPGWLADGSVRYPIITPSQRCGGGLPGVKTLFLFPNQTGFPSKQNRFNVYCFRDSAHPSASSEASSPASDGLEAIVTVTEKLEELQLPREVMESESRGAIYSIPVMEDGAGGSSSSPEDPSEAPGILLESETQSIAPPTRSSEEEIVLEEEERYKDTEAPEEEKEQEDLWVWPRELSSPLPTDLETEHSLSRVSPPAGAVLQLGASPSPRPPRVHGPPTETFLPPREGSLTSTPDGAREVAGETGSRELSGVLRESEETGSSSLEDGPSLLPTTWAPEGTRELETPSGEKSGRPVQAQPVLPTDSASRGGVAVAPSSGDCIPSPCHNGGTCLEEKEGFRCLCLPGYGGDLCDVGLQFCSPGWEAFQGACYKHFSTRRSWEDAESQCRALGAHLTSICTPEEQDFVNDRYREYQWIGLNDRTIEGDFLWSDGTPVLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPQLPLAQIFGRPRLRYAVDSVLRYQCREGLAQRNLPLIRCQENGLWEAPQISCVPRRPARALHSGDTPERPLGQLPRPRKALLTPPSSL
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(760171..760192,760835..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764778..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769930,770244..770339)
location: region:760171-770339:1
so has part: feature:760171-760192:1:exon
so has part: feature:760835-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764778-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769930:1:exon
so has part: feature:770244-770339:1:exon

XP_005356956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:760171-760192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760835-760942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761324-761695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761953-762127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762320-762447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762795-763088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764073-764297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764778-765344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767605-767712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768075-768233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769034-769116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769361-769505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769740-769930:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:770244-770339:1:exon

Bcan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bcan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X4
translation: MWLPEPEVRPSVCSMIPLLSLLAALVLTQAPAVLADDLKEDSSEDRAFRVRIGATQLRGVLGGALTIPCHVHHLRPLTSRRAVPGFPRVKWTFLAGDREAEVLVARGLRVKVNEAYRFRVALPTYPASLTDVSLVLSELRPNDSGVYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFAGAQEACARIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQNPREACYGDMDGYPGVRNYGVVGPEDLYDVYCYAEDLNGELFLGAPPGKLTWEEARDYCLERGAQIASTGQLYAAWNGGLDRCSPGWLADGSVRYPIITPSQRCGGGLPGVKTLFLFPNQTGFPSKQNRFNVYCFRDSAHPSASSEASSPASDGLEAIVTVTEKLEELQLPREVMESESRGAIYSIPVMEDGAGGSSSSPEDPSEAPGILLEEEIVLEEEERYKDTEAPEEEKEQEDLWVWPRELSSPLPTDLETEHSLSRVSPPAGAVLQLGASPSPRPPRVHGPPTETFLPPREGSLTSTPDGAREVAGETGSRELSGVLRESEETGSSSLEDGPSLLPTTWAPEGTRELETPSGEKSGRPVQAQPVLPTDSASRGGVAVAPSSGDCIPSPCHNGGTCLEEKEGFRCLCLPGYGGDLCDVGLQFCSPGWEAFQGACYKHFSTRRSWEDAESQCRALGAHLTSICTPEEQDFVNDRYREYQWIGLNDRTIEGDFLWSDGTPVLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPQLPLAQIFGRPRLRYAVDSVLRYQCREGLAQRNLPLIRCQENGLWEAPQISCVPRRPVSDKRKQARALHSGDTPERPLGQLPRPRKALLTPPSSL
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(760171..760192,760835..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764820..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769951,770244..770339)
location: region:760171-770339:1
so has part: feature:760171-760192:1:exon
so has part: feature:760835-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764820-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769951:1:exon
so has part: feature:770244-770339:1:exon

XP_026639833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:760171-760192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760835-760942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761324-761695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761953-762127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762320-762447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762795-763088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764073-764297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764820-765344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767605-767712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768075-768233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769034-769116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769361-769505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769740-769951:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:770244-770339:1:exon

Bcan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bcan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X3
translation: MIPLLSLLAALVLTQAPAVLADDLKEDSSEDRAFRVRIGATQLRGVLGGALTIPCHVHHLRPLTSRRAVPGFPRVKWTFLAGDREAEVLVARGLRVKVNEAYRFRVALPTYPASLTDVSLVLSELRPNDSGVYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFAGAQEACARIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQNPREACYGDMDGYPGVRNYGVVGPEDLYDVYCYAEDLNGELFLGAPPGKLTWEEARDYCLERGAQIASTGQLYAAWNGGLDRCSPGWLADGSVRYPIITPSQRCGGGLPGVKTLFLFPNQTGFPSKQNRFNVYCFRDSAHPSASSEASSPASDGLEAIVTVTEKLEELQLPREVMESESRGAIYSIPVMEDGAGGSSSSPEDPSEAPGILLESETQSIAPPTRSSEEEIVLEEEERYKDTEAPEEEKEQEDLWVWPRELSSPLPTDLETEHSLSRVSPPAGAVLQLGASPSPRPPRVHGPPTETFLPPREGSLTSTPDGAREVAGETGSRELSGVLRESEETGSSSLEDGPSLLPTTWAPEGTRELETPSGEKSGRPVQAQPVLPTDSASRGGVAVAPSSGDCIPSPCHNGGTCLEEKEGFRCLCLPGYGGDLCDVGLQFCSPGWEAFQGACYKHFSTRRSWEDAESQCRALGAHLTSICTPEEQDFVNDRYREYQWIGLNDRTIEGDFLWSDGTPVLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPQLPLAQIFGRPRLRYAVDSVLRYQCREGLAQRNLPLIRCQENGLWEAPQISCVPRRPVSDKRKQARALHSGDTPERPLGQLPRPRKALLTPPSSL
SIO_010081: Bcan
subclass of: SO_0000673
so part of: Bcan
location: join(760855..760942,761324..761695,761953..762127,762320..762447,762795..763088,764073..764297,764778..765344,767605..767712,768075..768233,769034..769116,769361..769505,769740..769951,770244..770339)
location: region:760855-770339:1
so has part: feature:760855-760942:1:exon
so has part: feature:761324-761695:1:exon
so has part: feature:761953-762127:1:exon
so has part: feature:762320-762447:1:exon
so has part: feature:762795-763088:1:exon
so has part: feature:764073-764297:1:exon
so has part: feature:764778-765344:1:exon
so has part: feature:767605-767712:1:exon
so has part: feature:768075-768233:1:exon
so has part: feature:769034-769116:1:exon
so has part: feature:769361-769505:1:exon
so has part: feature:769740-769951:1:exon
so has part: feature:770244-770339:1:exon

XP_005356957.1
type: Protein
SIO_000068: ncbiprotein

position:760855:1
position: 760855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760855-760942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761324-761695:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761953-762127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762320-762447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762795-763088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764073-764297:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764778-765344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767605-767712:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768075-768233:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:769034-769116:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769361-769505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769740-769951:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:770244-770339:1:exon

Nes
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Nes
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(783592..792192)
location: region:783592-792192:-1
so has part: feature:783592-792192:-1:exon
subclass of: SO_0000010

101992596
type: Gene
SIO_000068: ncbigene

position:783592:-1
position: 783592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792192:-1
position: 792192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783592-792192:-1:exon

Nes
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nes
product: nestin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005356901.3
SIO_010081: Nes
subclass of: SO_0000673
so part of: Nes
location: complement(join(783592..788370,788565..788638,790320..790444,791292..792192))
location: region:783592-792192:-1
so has part: feature:791292-792192:-1:exon
so has part: feature:790320-790444:-1:exon
so has part: feature:788565-788638:-1:exon
so has part: feature:783592-788370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791292-792192:-1:exon

position:791292:-1
position: 791292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790320-790444:-1:exon

position:790320:-1
position: 790320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790444:-1
position: 790444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788565-788638:-1:exon

position:788565:-1
position: 788565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788638:-1
position: 788638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:783592-788370:-1:exon

position:788370:-1
position: 788370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nes
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nes
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nestin
translation: MDGCVGEESFQLWELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSGDASWRARADDELAALRVLVDQRWREKHEAEMQRDNLAEELEGVTGRCQQVRLARDRTSEEVACSRRALEAEKSAQGWLSTRVAELERELEAVRAAHEEERAHLNAQAACAPLRLAAPPHGPPARAPEVEELARRLGEAWRGAVRDYQERVAHMESSLGQARERLARAMQGAREGRLELLQLQAERDGLQERREALEQRLEGRWQDRLQATEKLQLAVDALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENSRLQTPARSSQASRGFHDPKLKLHFLGTPEDQHLGSVLPVLSPTPLPSPMPSTLETPVTAFLKTQEFLQAQTPTLASTPIPPMPEAPCPIKAEVRAQDAPLSLLQTQGGRQQGPELLWTEATVSVSTSEEPGGKQLSHLPKDLTSSAHPVLETKDEESSESRVSSIFQEDEGQIWELVEKEAAIEVKGERSSAQETQEDGLDMEEIQDSQGPLQKETLEAPEEEPLMSLKIQNHETPGKENCNSLRSIDQTLGTLKSSEEKQTLLKSLEEKDVESLKTLERGLPELSKPLGKEDPGIEDDQELISPEGTLETVSSIGKENQEVVRSSEENLEPSTAFEKKSHYPLGCPEEENQIVERLIEKEGQESLRSLEEEDQETYRCLEKENGELLKSVEKEDQLVERLIEKEGQESLRSLEEEDQSIVKPLETENQESLRSLDEIQETIIPPGSKNQKQLKSLEIEEEQRIVKPLVKEVELLRSLEDNDQMTGSLVQNETQESLRSHKDRDQETQDPQRSLEEEDQMTGGLFQNEIQESLRSHKDRDQETQDPQRSLEEEDQMTGGLFQNEIQESLRSHKDRDQETQDPQRSLEEEGQGIVNYLEKEDQEFLWSLEEQMVKQSLERESHKPLSSVEQKDWVTENLDTESQDSGKSFEEENQQIFRSLGKETPESLQSPEEWDQEIQRSLQQETGQIVRDVGDEQLAVRQPELETPFGRQSPVSLEGRAETVKSSDTENTEPLKSAEAGLQTVNAVQVQEPLWSPEIQESLGYVYGNQETLRPLERENQELRSLGKWNLETVDSLEGMGAAGQQLEAEGCLDRNEQQESARSLAEVGQELPGSEKRQRWEDVVEDGAVNQDPVLWRTGVESKEEAEPPLTGQSGKEEAAEDRELQLQVTGEACSLGSSEPKEQRVPSEEDSRKGSAEAFQDMEGPPEQVEILEVPVAQGMPEVTEPLLQDEAIALTGEQDSKELALGSEAATRDGLEQEVIGLGEPKHLAREEAIHPSLGEQSVEVKIAQDLEGPEKEPLEAGTLESEIFELPKTSRDNLEPKSFKESEPAVGRGVEEPSVEPSDHEGSAVPQPRLSETEEDEGAQAVPALPGPKFMEPSSYIPALEDACELQPQAEEIQEAGWQLEGGSEALRKVGDEQEFGLGETPEGLQDWEESREESEADELGETLPDSTPLGLYLRSPTSPKWDLAREKRLSPQGEAREEGWDPPVLSNPPGEEEQGPDSDLSSEEFEDLGTEASFLPGVPKGVVDHLGQVPSVREPECWDQGGESDGFADEEESGEEGEEREEEAESGAQWWGPGPSGGGFKVQDITQRGDLLEQGSVGVSGPWDDGLRGVAANSSVTALDTESQDSSEPSGSEGSESVSLEGEDHLDAPQEVTSTVPGVGDTQSPNSELEHMNGRVENGLEQSEGQEGLHGDQDQGRLLQEQEVEVGALKAPLVVSPVHLGPSQSLEFPLSGVDGDSWSSEED
SIO_010081: Nes
subclass of: SO_0000673
so part of: Nes
location: complement(join(784001..788370,788565..788638,790320..790444,791292..792077))
location: region:784001-792077:-1
so has part: feature:791292-792077:-1:exon
so has part: feature:790320-790444:-1:exon
so has part: feature:788565-788638:-1:exon
so has part: feature:784001-788370:-1:exon

XP_005356958.1
type: Protein
SIO_000068: ncbiprotein

position:784001:-1
position: 784001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792077:-1
position: 792077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791292-792077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790320-790444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788565-788638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:784001-788370:-1:exon

LOC113457240
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457240
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(809979..810097)
location: region:809979-810097:-1
so has part: feature:809979-810097:-1:exon
subclass of: SO_0000573

113457240
type: Gene
SIO_000068: ncbigene

position:809979:-1
position: 809979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810097:-1
position: 810097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809979-810097:-1:exon

LOC113457240
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 79684
gene: LOC113457240
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377872.1
SIO_010081: LOC113457240
subclass of: SO_0000673
so part of: LOC113457240
location: complement(809979..810097)
location: region:809979-810097:-1
so has part: feature:809979-810097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809979-810097:-1:exon

Crabp2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Crabp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821754..826309)
location: region:821754-826309:-1
so has part: feature:821754-826309:-1:exon
subclass of: SO_0000010

101993058
type: Gene
SIO_000068: ncbigene

position:821754:-1
position: 821754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826309:-1
position: 826309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821754-826309:-1:exon

Crabp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Crabp2
product: cellular retinoic acid binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005356903.2
SIO_010081: Crabp2
subclass of: SO_0000673
so part of: Crabp2
location: complement(join(821754..822154,822535..822651,822831..823009,826083..826309))
location: region:821754-826309:-1
so has part: feature:826083-826309:-1:exon
so has part: feature:822831-823009:-1:exon
so has part: feature:822535-822651:-1:exon
so has part: feature:821754-822154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826083-826309:-1:exon

position:826083:-1
position: 826083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822831-823009:-1:exon

position:822831:-1
position: 822831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823009:-1
position: 823009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:822535-822651:-1:exon

position:822535:-1
position: 822535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822651:-1
position: 822651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:821754-822154:-1:exon

position:822154:-1
position: 822154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Crabp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Crabp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular retinoic acid-binding protein 2
translation: MPNFSGNWKIIRSENFEELLKALGVNVMLRKIAVAAASKPTVEIKQEGDSFYIKTSTTVRTTEINFKIGEEFEEQTVDGRACKSLVKWESENKMVCDQRLLKGEGPKTSWTRELTNDGELILTMAAGDIVCTRVYVRE
SIO_010081: Crabp2
subclass of: SO_0000673
so part of: Crabp2
location: complement(join(822104..822154,822535..822651,822831..823009,826083..826152))
location: region:822104-826152:-1
so has part: feature:826083-826152:-1:exon
so has part: feature:822831-823009:-1:exon
so has part: feature:822535-822651:-1:exon
so has part: feature:822104-822154:-1:exon

XP_005356960.1
type: Protein
SIO_000068: ncbiprotein

position:822104:-1
position: 822104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826152:-1
position: 826152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826083-826152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822831-823009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822535-822651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822104-822154:-1:exon

Isg20l2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Isg20l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(839734..850213)
location: region:839734-850213:-1
so has part: feature:839734-850213:-1:exon
subclass of: SO_0000010

101993337
type: Gene
SIO_000068: ncbigene

position:839734:-1
position: 839734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850213:-1
position: 850213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839734-850213:-1:exon

Isg20l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Isg20l2
product: interferon stimulated exonuclease gene 20 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005356904.3
SIO_010081: Isg20l2
subclass of: SO_0000673
so part of: Isg20l2
location: complement(join(839734..839974,840466..840666,848333..849328,850136..850213))
location: region:839734-850213:-1
so has part: feature:850136-850213:-1:exon
so has part: feature:848333-849328:-1:exon
so has part: feature:840466-840666:-1:exon
so has part: feature:839734-839974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850136-850213:-1:exon

position:850136:-1
position: 850136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848333-849328:-1:exon

position:848333:-1
position: 848333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849328:-1
position: 849328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840466-840666:-1:exon

position:840466:-1
position: 840466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840666:-1
position: 840666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:839734-839974:-1:exon

position:839974:-1
position: 839974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Isg20l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Isg20l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-stimulated 20 kDa exonuclease-like 2
translation: MSTILLNLDFGEPPKKAFGGNAKHQRFVKKRRFLEQRGFLKRNNQLPSKVSKLHSEPLKKREASSKVDGILKILPCPEKKEEAASKRESEQSTDKKASLSWLTPAPSKNTDSVVAKIDLLGEFQSALPKIKSRPAHAQKKGSKKKPLKKGATENSTQTPSESKGSKKPAQKSAAQNSTQAPLENKGSKKKKKKSSKKNAAQRSTDARSEDKCLKVSQNLPGKMVAVDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDDYVLPPCHIVDYRTRWSGIRKCHMAKATPFKIAQSQILKILKGKIVIGHAIHNDYKALQYFHPKSLTRDTSQIPLLNRKADCPENVTLSLKHLTKKLLHRDIQAGKSGHSSVEDAQATMELYKLVEVEWEQHLAQNPPEN
SIO_010081: Isg20l2
subclass of: SO_0000673
so part of: Isg20l2
location: complement(join(839861..839974,840466..840666,848333..849211))
location: region:839861-849211:-1
so has part: feature:848333-849211:-1:exon
so has part: feature:840466-840666:-1:exon
so has part: feature:839861-839974:-1:exon

XP_005356961.1
type: Protein
SIO_000068: ncbiprotein

position:839861:-1
position: 839861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849211:-1
position: 849211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848333-849211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:840466-840666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839861-839974:-1:exon

Rrnad1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rrnad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 850537..858490
location: region:850537-858490:1
so has part: feature:850537-858490:1:exon
subclass of: SO_0000010

101993633
type: Gene
SIO_000068: ncbigene

position:850537:1
position: 850537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858490:1
position: 858490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850537-858490:1:exon

Rrnad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rrnad1
product: ribosomal RNA adenine dimethylase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005356905.3
SIO_010081: Rrnad1
subclass of: SO_0000673
so part of: Rrnad1
location: join(850537..850889,853697..853821,853974..854166,854551..854613,854829..854972,855857..856341,857372..857556,857955..858490)
location: region:850537-858490:1
so has part: feature:850537-850889:1:exon
so has part: feature:853697-853821:1:exon
so has part: feature:853974-854166:1:exon
so has part: feature:854551-854613:1:exon
so has part: feature:854829-854972:1:exon
so has part: feature:855857-856341:1:exon
so has part: feature:857372-857556:1:exon
so has part: feature:857955-858490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850537-850889:1:exon

position:850889:1
position: 850889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853697-853821:1:exon

position:853697:1
position: 853697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853821:1
position: 853821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853974-854166:1:exon

position:853974:1
position: 853974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854166:1
position: 854166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:854551-854613:1:exon

position:854551:1
position: 854551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854613:1
position: 854613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:854829-854972:1:exon

position:854829:1
position: 854829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854972:1
position: 854972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:855857-856341:1:exon

position:855857:1
position: 855857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856341:1
position: 856341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:857372-857556:1:exon

position:857372:1
position: 857372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857556:1
position: 857556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:857955-858490:1:exon

position:857955:1
position: 857955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rrnad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rrnad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RRNAD1
translation: MPGVSVRGLSHEKRRQLAVNLTRVLALYRSILDAYIIEFFTDSLWGTLPSSWQEALDGLKPPQLATLLLGMPREGEEIRYRSVWPLTLLALKSTACALAFTRTPGFQTPSEFLENPSQSSRLAAPFRKHVKPKKQHEIRRLGELVKKLSDLTGCTQVVDVGSGQGHLSRFMSLGLGLMVKSLEGNQRLVERAQRLDQELLQALDKMEKRHPKVVQRGSRHSPHHVVQWVSPTALCDELLLPLETPCQGSTRLLLTGLHACGDLSVSLLRHFCCCSEVVALASVGCCYMKLSEPGSYPLSQWVAGLPGHELPYRLREGACHALEDYAKRLQKAGPGLQAHCFRAALETVIRRACPELRRPGVQGIPRVHELKIEEYVQQGLQRVGLDPQLPLDLAALWAQQAQENRVVAFFSLALLLAPLVETLILLDRLLYLQEQGFYAELLPIFSPELSPRNLVLVATKTPLGQAFSVLETEDN
SIO_010081: Rrnad1
subclass of: SO_0000673
so part of: Rrnad1
location: join(850779..850889,853697..853821,853974..854166,854551..854613,854829..854972,855857..856341,857372..857556,857955..858076)
location: region:850779-858076:1
so has part: feature:850779-850889:1:exon
so has part: feature:853697-853821:1:exon
so has part: feature:853974-854166:1:exon
so has part: feature:854551-854613:1:exon
so has part: feature:854829-854972:1:exon
so has part: feature:855857-856341:1:exon
so has part: feature:857372-857556:1:exon
so has part: feature:857955-858076:1:exon

XP_005356962.1
type: Protein
SIO_000068: ncbiprotein

position:850779:1
position: 850779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858076:1
position: 858076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850779-850889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853697-853821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853974-854166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854551-854613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854829-854972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855857-856341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:857372-857556:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857955-858076:1:exon

Mrpl24
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mrpl24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(858569..864902)
location: region:858569-864902:-1
so has part: feature:858569-864902:-1:exon
subclass of: SO_0000010

101993920
type: Gene
SIO_000068: ncbigene

position:858569:-1
position: 858569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864902:-1
position: 864902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858569-864902:-1:exon

Mrpl24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mrpl24
product: mitochondrial ribosomal protein L24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_005356906.3
SIO_010081: Mrpl24
subclass of: SO_0000673
so part of: Mrpl24
location: complement(join(858569..858781,858957..859087,859470..859573,859760..859855,859933..860168,864584..864902))
location: region:858569-864902:-1
so has part: feature:864584-864902:-1:exon
so has part: feature:859933-860168:-1:exon
so has part: feature:859760-859855:-1:exon
so has part: feature:859470-859573:-1:exon
so has part: feature:858957-859087:-1:exon
so has part: feature:858569-858781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864584-864902:-1:exon

position:864584:-1
position: 864584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859933-860168:-1:exon

position:859933:-1
position: 859933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860168:-1
position: 860168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859760-859855:-1:exon

position:859760:-1
position: 859760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859855:-1
position: 859855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859470-859573:-1:exon

position:859470:-1
position: 859470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859573:-1
position: 859573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858957-859087:-1:exon

position:858957:-1
position: 858957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859087:-1
position: 859087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858569-858781:-1:exon

position:858781:-1
position: 858781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mrpl24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mrpl24
product: mitochondrial ribosomal protein L24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005356907.3
SIO_010081: Mrpl24
subclass of: SO_0000673
so part of: Mrpl24
location: complement(join(858569..858781,858957..859087,859470..859573,859760..859855,859933..860168,863916..864133,864584..864829))
location: region:858569-864829:-1
so has part: feature:864584-864829:-1:exon
so has part: feature:863916-864133:-1:exon
so has part: feature:859933-860168:-1:exon
so has part: feature:859760-859855:-1:exon
so has part: feature:859470-859573:-1:exon
so has part: feature:858957-859087:-1:exon
so has part: feature:858569-858781:-1:exon

position:864829:-1
position: 864829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864584-864829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863916-864133:-1:exon

position:863916:-1
position: 863916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864133:-1
position: 864133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859933-860168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859760-859855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:859470-859573:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858957-859087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858569-858781:-1:exon

Mrpl24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mrpl24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L24, mitochondrial
translation: MRLSALLALASKATLPPHYRYGMSRPGSLSDKRKNPPWSRRRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVVQVIRQRNWVVLEGLNTHYRYVGRTMDHRGTMIPSEAPLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVSTRSGRIIPKPEFPRADGIVPETWTDGPKDTSVEDALERTYVPRLKTLEEDVMEAMGIQETRRHKKVYWY
SIO_010081: Mrpl24
subclass of: SO_0000673
so part of: Mrpl24
location: complement(join(858645..858781,858957..859087,859470..859573,859760..859855,859933..860115))
location: region:858645-860115:-1
so has part: feature:859933-860115:-1:exon
so has part: feature:859760-859855:-1:exon
so has part: feature:859470-859573:-1:exon
so has part: feature:858957-859087:-1:exon
so has part: feature:858645-858781:-1:exon

XP_005356963.1
type: Protein
SIO_000068: ncbiprotein

position:858645:-1
position: 858645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860115:-1
position: 860115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859933-860115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859760-859855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859470-859573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858957-859087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858645-858781:-1:exon

Mrpl24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mrpl24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L24, mitochondrial
translation: MRLSALLALASKATLPPHYRYGMSRPGSLSDKRKNPPWSRRRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVVQVIRQRNWVVLEGLNTHYRYVGRTMDHRGTMIPSEAPLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVSTRSGRIIPKPEFPRADGIVPETWTDGPKDTSVEDALERTYVPRLKTLEEDVMEAMGIQETRRHKKVYWY
SIO_010081: Mrpl24
subclass of: SO_0000673
so part of: Mrpl24
location: complement(join(858645..858781,858957..859087,859470..859573,859760..859855,859933..860115))
location: region:858645-860115:-1
so has part: feature:859933-860115:-1:exon
so has part: feature:859760-859855:-1:exon
so has part: feature:859470-859573:-1:exon
so has part: feature:858957-859087:-1:exon
so has part: feature:858645-858781:-1:exon

XP_005356964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:859933-860115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859760-859855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859470-859573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858957-859087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858645-858781:-1:exon

Hdgf
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hdgf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(869322..877867)
location: region:869322-877867:-1
so has part: feature:869322-877867:-1:exon
subclass of: SO_0000010

102001928
type: Gene
SIO_000068: ncbigene

position:869322:-1
position: 869322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877867:-1
position: 877867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869322-877867:-1:exon

Hdgf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hdgf
product: heparin binding growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356931.1
SIO_010081: Hdgf
subclass of: SO_0000673
so part of: Hdgf
location: complement(join(869322..869330,871001..871139,871283..871359,877689..877867))
location: region:869322-877867:-1
so has part: feature:877689-877867:-1:exon
so has part: feature:871283-871359:-1:exon
so has part: feature:871001-871139:-1:exon
so has part: feature:869322-869330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877689-877867:-1:exon

position:877689:-1
position: 877689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871283-871359:-1:exon

position:871283:-1
position: 871283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871359:-1
position: 871359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:871001-871139:-1:exon

position:871001:-1
position: 871001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871139:-1
position: 871139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:869322-869330:-1:exon

position:869330:-1
position: 869330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hdgf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hdgf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor
translation: MSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQVL
SIO_010081: Hdgf
subclass of: SO_0000673
so part of: Hdgf
location: complement(join(869322..869330,871001..871139,871283..871359,877689..877775))
location: region:869322-877775:-1
so has part: feature:877689-877775:-1:exon
so has part: feature:871283-871359:-1:exon
so has part: feature:871001-871139:-1:exon
so has part: feature:869322-869330:-1:exon

XP_005356988.1
type: Protein
SIO_000068: ncbiprotein

position:877775:-1
position: 877775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877689-877775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871283-871359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871001-871139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869322-869330:-1:exon

Prcc
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Prcc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 899558..928428
location: region:899558-928428:1
so has part: feature:899558-928428:1:exon
subclass of: SO_0000010

101994399
type: Gene
SIO_000068: ncbigene

position:899558:1
position: 899558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928428:1
position: 928428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899558-928428:1:exon

Prcc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Prcc
product: proline rich mitotic checkpoint control factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005356908.2
SIO_010081: Prcc
subclass of: SO_0000673
so part of: Prcc
location: join(899558..900277,917591..917638,919824..920390,922746..922841,925231..925374,927190..927255,928022..928428)
location: region:899558-928428:1
so has part: feature:899558-900277:1:exon
so has part: feature:917591-917638:1:exon
so has part: feature:919824-920390:1:exon
so has part: feature:922746-922841:1:exon
so has part: feature:925231-925374:1:exon
so has part: feature:927190-927255:1:exon
so has part: feature:928022-928428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899558-900277:1:exon

position:900277:1
position: 900277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:917591-917638:1:exon

position:917591:1
position: 917591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917638:1
position: 917638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919824-920390:1:exon

position:919824:1
position: 919824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920390:1
position: 920390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:922746-922841:1:exon

position:922746:1
position: 922746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922841:1
position: 922841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:925231-925374:1:exon

position:925231:1
position: 925231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925374:1
position: 925374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:927190-927255:1:exon

position:927190:1
position: 927190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927255:1
position: 927255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:928022-928428:1:exon

position:928022:1
position: 928022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Prcc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Prcc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein PRCC
translation: MSLVAYASSDESEPDEPEPEPEEEDVAAPVPGPTLGGLFASLPAPKGPALLPPPPQMLASAFPPPLLLPPPTGDLRLQPPPPLPFGLGGFPPPAGVSPAEAAGVGEGLGLPSPQGPGLSLPPAVGSVGHPLGLPKPKKRTEPVRIAAPELQKGDSDSEEDEPAKKKIVLQGSGEGTGLSALLPQPKNLTVKETNRLLLPHAFSRKPSDVSSDAKPSRLASKTKPASLAPVLGTTTTTPSPSAIKAAAKSAALQVTKQITQEDDDSDEEVAPENFFSLPDKAEPPGVEPYPYPVPTVPEELPPGTEPEPAFQDDAANAPLEFKMAAGSSVAPWMPKPGDDYSYNQFSTYGDANAAGAYYQDYYSGGYYPAPDPALVPPQEIAPDASFIDDEAFKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRRKHQITYLIHQAKERELELKNTWSENRLSRRQTQAKYGF
SIO_010081: Prcc
subclass of: SO_0000673
so part of: Prcc
location: join(899816..900277,917591..917638,919824..920390,922746..922841,925231..925374,927190..927255,928022..928108)
location: region:899816-928108:1
so has part: feature:899816-900277:1:exon
so has part: feature:917591-917638:1:exon
so has part: feature:919824-920390:1:exon
so has part: feature:922746-922841:1:exon
so has part: feature:925231-925374:1:exon
so has part: feature:927190-927255:1:exon
so has part: feature:928022-928108:1:exon

XP_005356965.1
type: Protein
SIO_000068: ncbiprotein

position:899816:1
position: 899816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928108:1
position: 928108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899816-900277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917591-917638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919824-920390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922746-922841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:925231-925374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:927190-927255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928022-928108:1:exon

LOC106144025
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106144025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(916293..916664)
location: region:916293-916664:-1
so has part: feature:916293-916664:-1:exon

106144025
type: Gene
SIO_000068: ncbigene

position:916293:-1
position: 916293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916664:-1
position: 916664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916293-916664:-1:exon

LOC106144025
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC106144025
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106144025
subclass of: SO_0000673
so part of: LOC106144025
location: complement(916293..916664)
location: region:916293-916664:-1
so has part: feature:916293-916664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916293-916664:-1:exon

Sh2d2a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sh2d2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(937521..946164)
location: region:937521-946164:-1
so has part: feature:937521-946164:-1:exon
subclass of: SO_0000010

102002201
type: Gene
SIO_000068: ncbigene

position:937521:-1
position: 937521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946164:-1
position: 946164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937521-946164:-1:exon

Sh2d2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sh2d2a
product: SH2 domain containing 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_005356932.1
SIO_010081: Sh2d2a
subclass of: SO_0000673
so part of: Sh2d2a
location: complement(join(937521..937862,938050..938205,940282..940450,940619..940708,941209..941390,941978..942132,942823..942850,946135..946164))
location: region:937521-946164:-1
so has part: feature:946135-946164:-1:exon
so has part: feature:942823-942850:-1:exon
so has part: feature:941978-942132:-1:exon
so has part: feature:941209-941390:-1:exon
so has part: feature:940619-940708:-1:exon
so has part: feature:940282-940450:-1:exon
so has part: feature:938050-938205:-1:exon
so has part: feature:937521-937862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946135-946164:-1:exon

position:946135:-1
position: 946135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:942823-942850:-1:exon

position:942823:-1
position: 942823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942850:-1
position: 942850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:941978-942132:-1:exon

position:941978:-1
position: 941978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942132:-1
position: 942132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:941209-941390:-1:exon

position:941209:-1
position: 941209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941390:-1
position: 941390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:940619-940708:-1:exon

position:940619:-1
position: 940619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940708:-1
position: 940708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:940282-940450:-1:exon

position:940282:-1
position: 940282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940450:-1
position: 940450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:938050-938205:-1:exon

position:938050:-1
position: 938050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938205:-1
position: 938205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:937521-937862:-1:exon

position:937862:-1
position: 937862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sh2d2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sh2d2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 2A
translation: MGNPNKQTLMFCLAQACPQGNHEAPSPTFSTFQPMNLTQGRCQDLGWGSKLSMQALKEQEVQLKPRATHTMASASAPGAAWVLGKTDKEEEVPGKGGLSLQAETRAWVQKTQAHWLLFRTAPVWFHGFITRREAERLLQPQPQGCYLVRFSESAVTFVLSYRSRTCCRHFLLAQLGDGRHMVLGEDSAHAQLQDLLQHYTACPLSPYGEMLTQPLARQTAEPTGLSLRTESDSGNKRQENADSQHSLLIHQGQTQTPAQKEKVWASQPKETSPAPRPRPPIPAKPQLPSELYASPASRPQRALPINPIYQEPDEPIAFYAMGRGSPGEAPSNIYAEVEGPSGTASTGHPVLRKCWSRPISGGQAKRVQGKKSSRRPAERGSSS
SIO_010081: Sh2d2a
subclass of: SO_0000673
so part of: Sh2d2a
location: complement(join(937521..937862,938050..938205,940282..940450,940619..940708,941209..941390,941978..942132,942823..942850,946135..946164))
location: region:937521-946164:-1
so has part: feature:946135-946164:-1:exon
so has part: feature:942823-942850:-1:exon
so has part: feature:941978-942132:-1:exon
so has part: feature:941209-941390:-1:exon
so has part: feature:940619-940708:-1:exon
so has part: feature:940282-940450:-1:exon
so has part: feature:938050-938205:-1:exon
so has part: feature:937521-937862:-1:exon

XP_005356989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:946135-946164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942823-942850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941978-942132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941209-941390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940619-940708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940282-940450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938050-938205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:937521-937862:-1:exon

Insrr
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Insrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(986359..1006114)
location: region:986359-1006114:-1
so has part: feature:986359-1006114:-1:exon
subclass of: SO_0000010

101995161
type: Gene
SIO_000068: ncbigene

position:986359:-1
position: 986359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006114:-1
position: 1006114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986359-1006114:-1:exon

Insrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Insrr
product: insulin receptor related receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356911.2
SIO_010081: Insrr
subclass of: SO_0000673
so part of: Insrr
location: complement(join(986359..987333,987665..987799,987932..988061,988343..988502,988609..988719,989069..989298,989999..990051,990550..990655,990786..990948,991036..991172,991411..991631,991708..991749,991911..992106,992192..992359,992850..993088,997519..997645,997810..998024,998937..999081,999222..999364,999447..999750,1001085..1001636,1005557..1006114))
location: region:986359-1006114:-1
so has part: feature:1005557-1006114:-1:exon
so has part: feature:1001085-1001636:-1:exon
so has part: feature:999447-999750:-1:exon
so has part: feature:999222-999364:-1:exon
so has part: feature:998937-999081:-1:exon
so has part: feature:997810-998024:-1:exon
so has part: feature:997519-997645:-1:exon
so has part: feature:992850-993088:-1:exon
so has part: feature:992192-992359:-1:exon
so has part: feature:991911-992106:-1:exon
so has part: feature:991708-991749:-1:exon
so has part: feature:991411-991631:-1:exon
so has part: feature:991036-991172:-1:exon
so has part: feature:990786-990948:-1:exon
so has part: feature:990550-990655:-1:exon
so has part: feature:989999-990051:-1:exon
so has part: feature:989069-989298:-1:exon
so has part: feature:988609-988719:-1:exon
so has part: feature:988343-988502:-1:exon
so has part: feature:987932-988061:-1:exon
so has part: feature:987665-987799:-1:exon
so has part: feature:986359-987333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1005557-1006114:-1:exon

position:1005557:-1
position: 1005557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1001085-1001636:-1:exon

position:1001085:-1
position: 1001085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001636:-1
position: 1001636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:999447-999750:-1:exon

position:999447:-1
position: 999447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999750:-1
position: 999750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:999222-999364:-1:exon

position:999222:-1
position: 999222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999364:-1
position: 999364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:998937-999081:-1:exon

position:998937:-1
position: 998937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999081:-1
position: 999081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:997810-998024:-1:exon

position:997810:-1
position: 997810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998024:-1
position: 998024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:997519-997645:-1:exon

position:997519:-1
position: 997519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997645:-1
position: 997645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:992850-993088:-1:exon

position:992850:-1
position: 992850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993088:-1
position: 993088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:992192-992359:-1:exon

position:992192:-1
position: 992192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992359:-1
position: 992359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:991911-992106:-1:exon

position:991911:-1
position: 991911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992106:-1
position: 992106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:991708-991749:-1:exon

position:991708:-1
position: 991708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991749:-1
position: 991749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:991411-991631:-1:exon

position:991411:-1
position: 991411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991631:-1
position: 991631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:991036-991172:-1:exon

position:991036:-1
position: 991036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991172:-1
position: 991172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:990786-990948:-1:exon

position:990786:-1
position: 990786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990948:-1
position: 990948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:990550-990655:-1:exon

position:990550:-1
position: 990550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990655:-1
position: 990655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:989999-990051:-1:exon

position:989999:-1
position: 989999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990051:-1
position: 990051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:989069-989298:-1:exon

position:989069:-1
position: 989069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989298:-1
position: 989298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:988609-988719:-1:exon

position:988609:-1
position: 988609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988719:-1
position: 988719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:988343-988502:-1:exon

position:988343:-1
position: 988343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988502:-1
position: 988502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:987932-988061:-1:exon

position:987932:-1
position: 987932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988061:-1
position: 988061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:987665-987799:-1:exon

position:987665:-1
position: 987665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987799:-1
position: 987799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:986359-987333:-1:exon

position:987333:-1
position: 987333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Insrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Insrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor-related protein
translation: MVAVPALWPWGVHLLVSLLSLGSGLDTLEVCPSLDIRSEVTELRRLENCSVVEGHLQILLMFAATGEDFRGLSFPSLTQVTDYLLLFRVYGLESLRDLFPNLAVIRGARLFLGYALIIFEMPHLRDIGLLSLGAVLRGAVRVEKNQELCHLSTIDWGLLQPAPGTNHIVGNKLGEECADVCPGVLGAAGEPCARTTFSEHTDYRCWTSSHCQRVCPCPGGLACTARGECCHHECLGGCSQPEDSRACVACRHLYFRGACLRTCPPGTYQYESWRCVTSEVCAHLREVPGRTTTFGIYQGSCLAQCPPGFTRNSSSIFCHKCEGLCPKECKVGTKTIDSVQATQDLVGCTHVEGNLILNLRQGYNLEPELQHNLGLVETITGFLKIKHSFALVSLGFFKNLKLIRGDSMVDGNYTLYVLDNQNLQQLGSWVTVGLTIPVGKMYFAFNPRLCMEHIYQLEEVTGTRGRQSKAEINPRTNGDRAACQTRTLRFVFNLTEADRILLRWERYEPLEARDLLSFIVYYKESPFQNATEHVGPDACGTQSWNLLDVELPLSRTQEPGVTLAPLKPWTQYAVFVRAITLTTAEDSPHQGAQSPIVYLRTLPAAPTVPQDVISTSKSSSHLLVRWKPPVQRNGNITYYLVLWQRLAEDGDLYINDYCHRGLRLPTSSHDARFDREDPALEAEPEQGCCPCQHSPPGQALPALETQEVTFQKKFENFLHHAITIPKSPWKVTSINKSPQRDLERHRREAGPLRLGTNNSDFEIQEDKVPRERAVLSGLRHFTEYRIDIHACNHAAHTVGCSAATFVFARTMPHREADDIPGKVAWKAAGRSSIILHWLEPPDPNGLILKYEIKYRRLGEEATVLCVSRLRYAKVGGVQLALLPPGNYSAKVRATSLAGNGSWTDGVAFYITGPEEEDAGGLRILLTVTPVGFMLLIMVAALGFFYNKRRSSTLYTSVNPEYYSASRMYVPDEWEVPRKQISIIRELGQGSFGMVYEGLVQGLEAGKESTPVALKTVNELASARERIEFLKEASVMKAFKCHHVVRLLGVVSQGQPTLVIMELMNRGDLKSHLRSLRPEAENNPGLPQPGLSDMIQMAGEIADGMAYLAANKFVHRDLAARNCMVSQDFTVKIGDFGMTRDVYETDYYRKGGKGLLPVRWMAPESLKDGIFTTHSDVWSFGVVLWEIVTLAEQPYQGLSNEQVLKFVMDGGVLEDLEDCPLQLQELMRLCWQPSPRLRPTFVHILDRIQNELRPSFRLCSFYYSPECQRGQASLLPTETEPDSPPNSNGTSDYRPPNRDPGH
SIO_010081: Insrr
subclass of: SO_0000673
so part of: Insrr
location: complement(join(987093..987333,987665..987799,987932..988061,988343..988502,988609..988719,989069..989298,989999..990051,990550..990655,990786..990948,991036..991172,991411..991631,991708..991749,991911..992106,992192..992359,992850..993088,997519..997645,997810..998024,998937..999081,999222..999364,999447..999750,1001085..1001636,1005557..1005644))
location: region:987093-1005644:-1
so has part: feature:1005557-1005644:-1:exon
so has part: feature:1001085-1001636:-1:exon
so has part: feature:999447-999750:-1:exon
so has part: feature:999222-999364:-1:exon
so has part: feature:998937-999081:-1:exon
so has part: feature:997810-998024:-1:exon
so has part: feature:997519-997645:-1:exon
so has part: feature:992850-993088:-1:exon
so has part: feature:992192-992359:-1:exon
so has part: feature:991911-992106:-1:exon
so has part: feature:991708-991749:-1:exon
so has part: feature:991411-991631:-1:exon
so has part: feature:991036-991172:-1:exon
so has part: feature:990786-990948:-1:exon
so has part: feature:990550-990655:-1:exon
so has part: feature:989999-990051:-1:exon
so has part: feature:989069-989298:-1:exon
so has part: feature:988609-988719:-1:exon
so has part: feature:988343-988502:-1:exon
so has part: feature:987932-988061:-1:exon
so has part: feature:987665-987799:-1:exon
so has part: feature:987093-987333:-1:exon

XP_005356968.1
type: Protein
SIO_000068: ncbiprotein

position:987093:-1
position: 987093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005644:-1
position: 1005644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005557-1005644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1001085-1001636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:999447-999750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999222-999364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998937-999081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997810-998024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:997519-997645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:992850-993088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:992192-992359:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:991911-992106:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:991708-991749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:991411-991631:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:991036-991172:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:990786-990948:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:990550-990655:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989999-990051:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989069-989298:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988609-988719:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:988343-988502:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:987932-988061:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:987665-987799:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:987093-987333:-1:exon

Ntrk1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ntrk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1007816..1023849
location: region:1007816-1023849:1
so has part: feature:1007816-1023849:1:exon
subclass of: SO_0000010

101994684
type: Gene
SIO_000068: ncbigene

position:1007816:1
position: 1007816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023849:1
position: 1023849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007816-1023849:1:exon

Ntrk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ntrk1
product: neurotrophic receptor tyrosine kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005356909.2
SIO_010081: Ntrk1
subclass of: SO_0000673
so part of: Ntrk1
location: join(1007816..1008074,1010643..1010717,1010937..1011008,1012570..1012638,1013220..1013371,1013538..1013680,1015835..1015967,1017807..1018136,1018479..1018496,1018598..1018653,1018779..1018881,1019192..1019338,1019637..1019767,1019852..1020024,1021859..1022099,1022337..1022495,1023496..1023849)
location: region:1007816-1023849:1
so has part: feature:1007816-1008074:1:exon
so has part: feature:1010643-1010717:1:exon
so has part: feature:1010937-1011008:1:exon
so has part: feature:1012570-1012638:1:exon
so has part: feature:1013220-1013371:1:exon
so has part: feature:1013538-1013680:1:exon
so has part: feature:1015835-1015967:1:exon
so has part: feature:1017807-1018136:1:exon
so has part: feature:1018479-1018496:1:exon
so has part: feature:1018598-1018653:1:exon
so has part: feature:1018779-1018881:1:exon
so has part: feature:1019192-1019338:1:exon
so has part: feature:1019637-1019767:1:exon
so has part: feature:1019852-1020024:1:exon
so has part: feature:1021859-1022099:1:exon
so has part: feature:1022337-1022495:1:exon
so has part: feature:1023496-1023849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007816-1008074:1:exon

position:1008074:1
position: 1008074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1010643-1010717:1:exon

position:1010643:1
position: 1010643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010717:1
position: 1010717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1010937-1011008:1:exon

position:1010937:1
position: 1010937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011008:1
position: 1011008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1012570-1012638:1:exon

position:1012570:1
position: 1012570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012638:1
position: 1012638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1013220-1013371:1:exon

position:1013220:1
position: 1013220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013371:1
position: 1013371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1013538-1013680:1:exon

position:1013538:1
position: 1013538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013680:1
position: 1013680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1015835-1015967:1:exon

position:1015835:1
position: 1015835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015967:1
position: 1015967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1017807-1018136:1:exon

position:1017807:1
position: 1017807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018136:1
position: 1018136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1018479-1018496:1:exon

position:1018479:1
position: 1018479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018496:1
position: 1018496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1018598-1018653:1:exon

position:1018598:1
position: 1018598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018653:1
position: 1018653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1018779-1018881:1:exon

position:1018779:1
position: 1018779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018881:1
position: 1018881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1019192-1019338:1:exon

position:1019192:1
position: 1019192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019338:1
position: 1019338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1019637-1019767:1:exon

position:1019637:1
position: 1019637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019767:1
position: 1019767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1019852-1020024:1:exon

position:1019852:1
position: 1019852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020024:1
position: 1020024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1021859-1022099:1:exon

position:1021859:1
position: 1021859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022099:1
position: 1022099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1022337-1022495:1:exon

position:1022337:1
position: 1022337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022495:1
position: 1022495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1023496-1023849:1:exon

position:1023496:1
position: 1023496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ntrk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ntrk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity nerve growth factor receptor
translation: MLRGQRRGQLGWHHRAAGLGRLLASLMLASACAASCREACCPVGSSGLRCARAGTLDTLRGLQGAGNLTELYVENQQHLKRLEFGDLQGLGELRSLTIVKSGLHFVAPDAFQLTPRLSHLNLSSNALESLSWKTVQGLSLQDLTLSGNPLLCSCALSWLQRWEQEVLCAVHTQELQGSGPGGQLLPLRHNTSCGVPTVKIQMPNDSVEVGDDVFLRCQVEGQALQQAGWILTELEGTVTVKKSENLPSLGLTLLNVTSDLNKKNVTCWAENDVGRAEVSAQVSVSFPASVRLGMAVEQHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTQFLESTLTNETMRHGCLRLNQPTHVNNGNYTLLAANAYGQAADSIMAAFMDNPFEFNPEDPIPVSFSPVDTNSTSRDPVEKKDETPFGVSVAVGLAVSAALFLSALLLVLNKCGQRSKFGINRPAVLASEDGLAMSLHFMTLGGSSLSPSEGKGSGLQGHVMENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECYNLLHEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFSTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRACPPDVYAIMRGCWQREPQQRHSMKDVHARLQALAQAPPSYLDVLG
SIO_010081: Ntrk1
subclass of: SO_0000673
so part of: Ntrk1
location: join(1007863..1008074,1010643..1010717,1010937..1011008,1012570..1012638,1013220..1013371,1013538..1013680,1015835..1015967,1017807..1018136,1018479..1018496,1018598..1018653,1018779..1018881,1019192..1019338,1019637..1019767,1019852..1020024,1021859..1022099,1022337..1022495,1023496..1023681)
location: region:1007863-1023681:1
so has part: feature:1007863-1008074:1:exon
so has part: feature:1010643-1010717:1:exon
so has part: feature:1010937-1011008:1:exon
so has part: feature:1012570-1012638:1:exon
so has part: feature:1013220-1013371:1:exon
so has part: feature:1013538-1013680:1:exon
so has part: feature:1015835-1015967:1:exon
so has part: feature:1017807-1018136:1:exon
so has part: feature:1018479-1018496:1:exon
so has part: feature:1018598-1018653:1:exon
so has part: feature:1018779-1018881:1:exon
so has part: feature:1019192-1019338:1:exon
so has part: feature:1019637-1019767:1:exon
so has part: feature:1019852-1020024:1:exon
so has part: feature:1021859-1022099:1:exon
so has part: feature:1022337-1022495:1:exon
so has part: feature:1023496-1023681:1:exon

XP_005356966.1
type: Protein
SIO_000068: ncbiprotein

position:1007863:1
position: 1007863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023681:1
position: 1023681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007863-1008074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010643-1010717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010937-1011008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1012570-1012638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1013220-1013371:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013538-1013680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1015835-1015967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1017807-1018136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1018479-1018496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1018598-1018653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1018779-1018881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1019192-1019338:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1019637-1019767:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1019852-1020024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1021859-1022099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1022337-1022495:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1023496-1023681:1:exon

Pear1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Pear1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1034630..1052302
location: region:1034630-1052302:1
so has part: feature:1034630-1052302:1:exon
subclass of: SO_0000010

101995453
type: Gene
SIO_000068: ncbigene

position:1034630:1
position: 1034630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052302:1
position: 1052302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034630-1052302:1:exon

Pear1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Pear1
product: platelet endothelial aggregation receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349799.2
SIO_010081: Pear1
subclass of: SO_0000673
so part of: Pear1
location: join(1034630..1034777,1041530..1041691,1042239..1042343,1043001..1043101,1043682..1043774,1043902..1044145,1044592..1044712,1044912..1045048,1045136..1045348,1045574..1045748,1045827..1045947,1046706..1046869,1046956..1047058,1047146..1047292,1047426..1047551,1049091..1049219,1049325..1049453,1049561..1049773,1049915..1050003,1050085..1050208,1050332..1050406,1050496..1050741,1051094..1052302)
location: region:1034630-1052302:1
so has part: feature:1034630-1034777:1:exon
so has part: feature:1041530-1041691:1:exon
so has part: feature:1042239-1042343:1:exon
so has part: feature:1043001-1043101:1:exon
so has part: feature:1043682-1043774:1:exon
so has part: feature:1043902-1044145:1:exon
so has part: feature:1044592-1044712:1:exon
so has part: feature:1044912-1045048:1:exon
so has part: feature:1045136-1045348:1:exon
so has part: feature:1045574-1045748:1:exon
so has part: feature:1045827-1045947:1:exon
so has part: feature:1046706-1046869:1:exon
so has part: feature:1046956-1047058:1:exon
so has part: feature:1047146-1047292:1:exon
so has part: feature:1047426-1047551:1:exon
so has part: feature:1049091-1049219:1:exon
so has part: feature:1049325-1049453:1:exon
so has part: feature:1049561-1049773:1:exon
so has part: feature:1049915-1050003:1:exon
so has part: feature:1050085-1050208:1:exon
so has part: feature:1050332-1050406:1:exon
so has part: feature:1050496-1050741:1:exon
so has part: feature:1051094-1052302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034630-1034777:1:exon

position:1034777:1
position: 1034777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1041530-1041691:1:exon

position:1041530:1
position: 1041530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041691:1
position: 1041691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1042239-1042343:1:exon

position:1042239:1
position: 1042239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042343:1
position: 1042343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1043001-1043101:1:exon

position:1043001:1
position: 1043001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043101:1
position: 1043101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1043682-1043774:1:exon

position:1043682:1
position: 1043682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043774:1
position: 1043774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1043902-1044145:1:exon

position:1043902:1
position: 1043902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044145:1
position: 1044145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1044592-1044712:1:exon

position:1044592:1
position: 1044592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044712:1
position: 1044712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1044912-1045048:1:exon

position:1044912:1
position: 1044912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045048:1
position: 1045048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1045136-1045348:1:exon

position:1045136:1
position: 1045136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045348:1
position: 1045348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1045574-1045748:1:exon

position:1045574:1
position: 1045574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045748:1
position: 1045748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1045827-1045947:1:exon

position:1045827:1
position: 1045827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045947:1
position: 1045947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1046706-1046869:1:exon

position:1046706:1
position: 1046706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046869:1
position: 1046869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1046956-1047058:1:exon

position:1046956:1
position: 1046956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047058:1
position: 1047058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1047146-1047292:1:exon

position:1047146:1
position: 1047146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047292:1
position: 1047292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1047426-1047551:1:exon

position:1047426:1
position: 1047426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047551:1
position: 1047551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1049091-1049219:1:exon

position:1049091:1
position: 1049091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049219:1
position: 1049219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1049325-1049453:1:exon

position:1049325:1
position: 1049325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049453:1
position: 1049453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1049561-1049773:1:exon

position:1049561:1
position: 1049561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049773:1
position: 1049773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1049915-1050003:1:exon

position:1049915:1
position: 1049915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050003:1
position: 1050003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1050085-1050208:1:exon

position:1050085:1
position: 1050085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050208:1
position: 1050208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1050332-1050406:1:exon

position:1050332:1
position: 1050332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050406:1
position: 1050406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1050496-1050741:1:exon

position:1050496:1
position: 1050496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050741:1
position: 1050741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1051094-1052302:1:exon

position:1051094:1
position: 1051094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pear1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Pear1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet endothelial aggregation receptor 1
translation: MRPLLRLLLLAFGLGLTRPLNSNDPNVCTFWESFTTTTKESHLRPFSLLPAESCDRPWEDPHTCPQPTVVYRTVYRQVVKTDSRPRLQCCWGHYESSGACVPLCAQECVHGRCVAPNRCQCAPGWRGDDCSSECAPGVWGPRCDKPCHCGNSSSCDPKSGACFCPSGLQPPNCLQPCPPGHYGPACQFGCHCHGASCDAQNGACFCPPGRTGPSCNVPCSQGTAGFFCPRTSPCQNGGVFQVAQGYCSCPPGWMGDICSLPCPEGFHGPNCTHECRCHNGGLCDRFTGQCHCAPGYIGDRCHEECPVGRFGQDCAETCDCAPGARCFPANGACLCEHGFTGDRCTERLCPDGLYGLSCQEPCTCDPEHSLSCHPMHGECACQPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCLADSGLCRCAPGYTGPHCANLCPPDTYGINCSSHCSCENAITCSPIDGTCICKEGWQRGNCSVPCPPGTWGFSCNTSCQCAHEGVCSPQTGACTCTPGWHGAHCQFPCPKGQFGDGCASVCDCDHSDGCDPVHGHCRCQAGWMGTRCHLPCPEGFWGANCSNTCTCKNGGTCVPENGNCVCAPGFRGPSCQRPCQPGRYGKRCVPCKCNNHSSCHPSDGTCYCLAGWTGSDCSESCPPGLWGLKCSQPCQCHHGGTCHPQDGSCACTAGWTGPYCLEGCPPGVFGVNCSQLCQCGPGERCHPETGACVCPPGHSGAPCRIGSQESSTIMPTSPVTHNSLGAVIGIAVLGTLVVALVALFIGYRHWQKGKEHEHLAVAYSSGRLDGSDYIMPDVSPSYSHYYSNPSYHTLSQCSPNPPPPNKVPGSQLFASSQASERAGRTHGRDNHATLPADWQHRREPRDRGSGHLDRSYSCSYSHRNGPGLFCPKGPTSEEGLGASVMSLSSENPYATIRDLPGLPGEPRESSYVEMKGPPSASPPRQPLHLRDRQQRQQQPQRDSGTYEQPSLLSHNEESVGSMPPLPPGLPPGHYDSPKNSHIPGHYDLPPVRHPPSPPPRRQDR
SIO_010081: Pear1
subclass of: SO_0000673
so part of: Pear1
location: join(1041594..1041691,1042239..1042343,1043001..1043101,1043682..1043774,1043902..1044145,1044592..1044712,1044912..1045048,1045136..1045348,1045574..1045748,1045827..1045947,1046706..1046869,1046956..1047058,1047146..1047292,1047426..1047551,1049091..1049219,1049325..1049453,1049561..1049773,1049915..1050003,1050085..1050208,1050332..1050406,1050496..1050741,1051094..1051245)
location: region:1041594-1051245:1
so has part: feature:1041594-1041691:1:exon
so has part: feature:1042239-1042343:1:exon
so has part: feature:1043001-1043101:1:exon
so has part: feature:1043682-1043774:1:exon
so has part: feature:1043902-1044145:1:exon
so has part: feature:1044592-1044712:1:exon
so has part: feature:1044912-1045048:1:exon
so has part: feature:1045136-1045348:1:exon
so has part: feature:1045574-1045748:1:exon
so has part: feature:1045827-1045947:1:exon
so has part: feature:1046706-1046869:1:exon
so has part: feature:1046956-1047058:1:exon
so has part: feature:1047146-1047292:1:exon
so has part: feature:1047426-1047551:1:exon
so has part: feature:1049091-1049219:1:exon
so has part: feature:1049325-1049453:1:exon
so has part: feature:1049561-1049773:1:exon
so has part: feature:1049915-1050003:1:exon
so has part: feature:1050085-1050208:1:exon
so has part: feature:1050332-1050406:1:exon
so has part: feature:1050496-1050741:1:exon
so has part: feature:1051094-1051245:1:exon

XP_013205253.2
type: Protein
SIO_000068: ncbiprotein

position:1041594:1
position: 1041594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051245:1
position: 1051245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041594-1041691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1042239-1042343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043001-1043101:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043682-1043774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043902-1044145:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1044592-1044712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044912-1045048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045136-1045348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1045574-1045748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1045827-1045947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046706-1046869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1046956-1047058:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1047146-1047292:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1047426-1047551:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1049091-1049219:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1049325-1049453:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1049561-1049773:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1049915-1050003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050085-1050208:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1050332-1050406:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1050496-1050741:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1051094-1051245:1:exon

Lrrc71
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lrrc71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1052874..1061390
location: region:1052874-1061390:1
so has part: feature:1052874-1061390:1:exon
subclass of: SO_0000010

101995752
type: Gene
SIO_000068: ncbigene

position:1052874:1
position: 1052874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061390:1
position: 1061390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052874-1061390:1:exon

Lrrc71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrc71
product: leucine rich repeat containing 71, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026784052.1
SIO_010081: Lrrc71
subclass of: SO_0000673
so part of: Lrrc71
location: join(1052874..1053136,1055224..1055373,1055453..1055581,1055939..1056014,1056090..1056167,1056835..1056903,1057068..1057227,1057298..1057381,1057463..1057552,1058257..1058406,1058562..1058655,1059010..1059098,1059891..1059932,1060008..1060122,1060406..1060527,1060724..1061390)
location: region:1052874-1061390:1
so has part: feature:1052874-1053136:1:exon
so has part: feature:1055224-1055373:1:exon
so has part: feature:1055453-1055581:1:exon
so has part: feature:1055939-1056014:1:exon
so has part: feature:1056090-1056167:1:exon
so has part: feature:1056835-1056903:1:exon
so has part: feature:1057068-1057227:1:exon
so has part: feature:1057298-1057381:1:exon
so has part: feature:1057463-1057552:1:exon
so has part: feature:1058257-1058406:1:exon
so has part: feature:1058562-1058655:1:exon
so has part: feature:1059010-1059098:1:exon
so has part: feature:1059891-1059932:1:exon
so has part: feature:1060008-1060122:1:exon
so has part: feature:1060406-1060527:1:exon
so has part: feature:1060724-1061390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052874-1053136:1:exon

position:1053136:1
position: 1053136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1055224-1055373:1:exon

position:1055224:1
position: 1055224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055373:1
position: 1055373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055453-1055581:1:exon

position:1055453:1
position: 1055453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055581:1
position: 1055581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1055939-1056014:1:exon

position:1055939:1
position: 1055939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056014:1
position: 1056014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1056090-1056167:1:exon

position:1056090:1
position: 1056090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056167:1
position: 1056167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1056835-1056903:1:exon

position:1056835:1
position: 1056835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056903:1
position: 1056903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1057068-1057227:1:exon

position:1057068:1
position: 1057068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057227:1
position: 1057227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1057298-1057381:1:exon

position:1057298:1
position: 1057298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057381:1
position: 1057381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1057463-1057552:1:exon

position:1057463:1
position: 1057463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057552:1
position: 1057552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1058257-1058406:1:exon

position:1058257:1
position: 1058257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058406:1
position: 1058406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1058562-1058655:1:exon

position:1058562:1
position: 1058562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058655:1
position: 1058655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1059010-1059098:1:exon

position:1059010:1
position: 1059010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059098:1
position: 1059098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1059891-1059932:1:exon

position:1059891:1
position: 1059891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059932:1
position: 1059932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1060008-1060122:1:exon

position:1060008:1
position: 1060008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060122:1
position: 1060122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1060406-1060527:1:exon

position:1060406:1
position: 1060406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060527:1
position: 1060527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1060724-1061390:1:exon

position:1060724:1
position: 1060724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lrrc71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lrrc71
product: leucine rich repeat containing 71, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356914.2
SIO_010081: Lrrc71
subclass of: SO_0000673
so part of: Lrrc71
location: join(1052874..1053136,1055224..1055373,1055453..1055581,1055939..1056014,1056090..1056167,1056835..1056903,1057068..1057227,1057298..1057381,1057463..1057552,1058257..1058406,1058562..1058655,1059010..1059098,1060011..1060122,1060406..1060527,1060724..1061390)
location: region:1052874-1061390:1
so has part: feature:1052874-1053136:1:exon
so has part: feature:1055224-1055373:1:exon
so has part: feature:1055453-1055581:1:exon
so has part: feature:1055939-1056014:1:exon
so has part: feature:1056090-1056167:1:exon
so has part: feature:1056835-1056903:1:exon
so has part: feature:1057068-1057227:1:exon
so has part: feature:1057298-1057381:1:exon
so has part: feature:1057463-1057552:1:exon
so has part: feature:1058257-1058406:1:exon
so has part: feature:1058562-1058655:1:exon
so has part: feature:1059010-1059098:1:exon
so has part: feature:1060011-1060122:1:exon
so has part: feature:1060406-1060527:1:exon
so has part: feature:1060724-1061390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052874-1053136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055224-1055373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055453-1055581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055939-1056014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1056090-1056167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1056835-1056903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1057068-1057227:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1057298-1057381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057463-1057552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058257-1058406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058562-1058655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1059010-1059098:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1060011-1060122:1:exon

position:1060011:1
position: 1060011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1060406-1060527:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1060724-1061390:1:exon

Lrrc71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrc71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 71 isoform X1
translation: MSNEPSATGTSPRTPRPGAQKSSGAVTKKGERAAKEKPATALPPVGEEEPKNPEEYQCSGILETDFAELCARSGYTDFPKVVTRPRPHQNFVPSASMSEKPTQDDQRLSASCSQNSLESKYVFFRPTIQVEMEPEDSKAVKEIYIRGWKVEDRILGILSKCLPSLSQLQAINLWKVGLTDKTLTTFIALLPLCSSTLRKVSLEGNPLPEQSYYKLMGLDSTIAHLSLRNNNIDDHGAQLLGQALSTLHNSNRTLVSLNLGFNHIGDEGAGYIADGLRLNRSLLWLSLAHNRIQDKGALKLAEVLRPFELTHREVVERRRLLLEKGSQERSRSPSSSRHGDSKTEREKSQTMGISSVALADKPEKMQTVKTPKGLGKKKEKSGEVVKKEEKSGSGQSPTQGTPKKEDATKAGKGKVTIPEQKMSKGKGPKTGSKEKRSILLESEHLGYSLNYNQHSKPQLVVEATEMVNPLLEPVEHRDGKVFMPGNKVLLHLNLLRNRITEVGLEGFLTAVQYQVQVSKPKSSSKGPLGLLWLSLAKNCFDPQCPTYTMIQELMLPRDPVKAKVREEEATAT
SIO_010081: Lrrc71
subclass of: SO_0000673
so part of: Lrrc71
location: join(1052977..1053136,1055224..1055373,1055453..1055581,1055939..1056014,1056090..1056167,1056835..1056903,1057068..1057227,1057298..1057381,1057463..1057552,1058257..1058406,1058562..1058655,1059010..1059098,1059891..1059932,1060008..1060122,1060406..1060527,1060724..1060834)
location: region:1052977-1060834:1
so has part: feature:1052977-1053136:1:exon
so has part: feature:1055224-1055373:1:exon
so has part: feature:1055453-1055581:1:exon
so has part: feature:1055939-1056014:1:exon
so has part: feature:1056090-1056167:1:exon
so has part: feature:1056835-1056903:1:exon
so has part: feature:1057068-1057227:1:exon
so has part: feature:1057298-1057381:1:exon
so has part: feature:1057463-1057552:1:exon
so has part: feature:1058257-1058406:1:exon
so has part: feature:1058562-1058655:1:exon
so has part: feature:1059010-1059098:1:exon
so has part: feature:1059891-1059932:1:exon
so has part: feature:1060008-1060122:1:exon
so has part: feature:1060406-1060527:1:exon
so has part: feature:1060724-1060834:1:exon

XP_026639853.1
type: Protein
SIO_000068: ncbiprotein

position:1052977:1
position: 1052977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060834:1
position: 1060834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052977-1053136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055224-1055373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055453-1055581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055939-1056014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1056090-1056167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1056835-1056903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1057068-1057227:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1057298-1057381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057463-1057552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058257-1058406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058562-1058655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1059010-1059098:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1059891-1059932:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1060008-1060122:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1060406-1060527:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1060724-1060834:1:exon

Lrrc71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lrrc71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 71 isoform X2
translation: MSNEPSATGTSPRTPRPGAQKSSGAVTKKGERAAKEKPATALPPVGEEEPKNPEEYQCSGILETDFAELCARSGYTDFPKVVTRPRPHQNFVPSASMSEKPTQDDQRLSASCSQNSLESKYVFFRPTIQVEMEPEDSKAVKEIYIRGWKVEDRILGILSKCLPSLSQLQAINLWKVGLTDKTLTTFIALLPLCSSTLRKVSLEGNPLPEQSYYKLMGLDSTIAHLSLRNNNIDDHGAQLLGQALSTLHNSNRTLVSLNLGFNHIGDEGAGYIADGLRLNRSLLWLSLAHNRIQDKGALKLAEVLRPFELTHREVVERRRLLLEKGSQERSRSPSSSRHGDSKTEREKSQTMGISSVALADKPEKMQTVKTPKGLGKKKEKSGEVVKKEEKSGSGQSPTQGTPKKEDATKAGKGKVTIPEQKMSKGKGPKTGSKEKRSILLESELVVEATEMVNPLLEPVEHRDGKVFMPGNKVLLHLNLLRNRITEVGLEGFLTAVQYQVQVSKPKSSSKGPLGLLWLSLAKNCFDPQCPTYTMIQELMLPRDPVKAKVREEEATAT
SIO_010081: Lrrc71
subclass of: SO_0000673
so part of: Lrrc71
location: join(1052977..1053136,1055224..1055373,1055453..1055581,1055939..1056014,1056090..1056167,1056835..1056903,1057068..1057227,1057298..1057381,1057463..1057552,1058257..1058406,1058562..1058655,1059010..1059098,1060011..1060122,1060406..1060527,1060724..1060834)
location: region:1052977-1060834:1
so has part: feature:1052977-1053136:1:exon
so has part: feature:1055224-1055373:1:exon
so has part: feature:1055453-1055581:1:exon
so has part: feature:1055939-1056014:1:exon
so has part: feature:1056090-1056167:1:exon
so has part: feature:1056835-1056903:1:exon
so has part: feature:1057068-1057227:1:exon
so has part: feature:1057298-1057381:1:exon
so has part: feature:1057463-1057552:1:exon
so has part: feature:1058257-1058406:1:exon
so has part: feature:1058562-1058655:1:exon
so has part: feature:1059010-1059098:1:exon
so has part: feature:1060011-1060122:1:exon
so has part: feature:1060406-1060527:1:exon
so has part: feature:1060724-1060834:1:exon

XP_005356971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1052977-1053136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055224-1055373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055453-1055581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055939-1056014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1056090-1056167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1056835-1056903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1057068-1057227:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1057298-1057381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057463-1057552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058257-1058406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058562-1058655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1059010-1059098:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1060011-1060122:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1060406-1060527:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1060724-1060834:1:exon

Arhgef11
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Arhgef11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1061750..1235183)
location: region:1061750-1235183:-1
so has part: feature:1061750-1235183:-1:exon
subclass of: SO_0000010

101997561
type: Gene
SIO_000068: ncbigene

position:1061750:-1
position: 1061750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235183:-1
position: 1235183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061750-1235183:-1:exon

Arhgef11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef11
product: Rho guanine nucleotide exchange factor 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_026784041.1
SIO_010081: Arhgef11
subclass of: SO_0000673
so part of: Arhgef11
location: complement(join(1061750..1062761,1065248..1065431,1065700..1065944,1066711..1066839,1067744..1068094,1068375..1068587,1069382..1069443,1069898..1070023,1070571..1070661,1071338..1071505,1071800..1071875,1072411..1072589,1073165..1073282,1073725..1073850,1073979..1074058,1074328..1074474,1074840..1075027,1075223..1075270,1075394..1075576,1078372..1078498,1084550..1084649,1084912..1085056,1086299..1086322,1089475..1089597,1089708..1089804,1106367..1106409,1109152..1109250,1110469..1110570,1110777..1110851,1114623..1114760,1115627..1115703,1116205..1116250,1118150..1118269,1124277..1124348,1125150..1125328,1126716..1126773,1127383..1127432,1129014..1129112,1130035..1130126,1130623..1130637,1131843..1131875,1233999..1234099,1234859..1235183))
location: region:1061750-1235183:-1
so has part: feature:1234859-1235183:-1:exon
so has part: feature:1233999-1234099:-1:exon
so has part: feature:1131843-1131875:-1:exon
so has part: feature:1130623-1130637:-1:exon
so has part: feature:1130035-1130126:-1:exon
so has part: feature:1129014-1129112:-1:exon
so has part: feature:1127383-1127432:-1:exon
so has part: feature:1126716-1126773:-1:exon
so has part: feature:1125150-1125328:-1:exon
so has part: feature:1124277-1124348:-1:exon
so has part: feature:1118150-1118269:-1:exon
so has part: feature:1116205-1116250:-1:exon
so has part: feature:1115627-1115703:-1:exon
so has part: feature:1114623-1114760:-1:exon
so has part: feature:1110777-1110851:-1:exon
so has part: feature:1110469-1110570:-1:exon
so has part: feature:1109152-1109250:-1:exon
so has part: feature:1106367-1106409:-1:exon
so has part: feature:1089708-1089804:-1:exon
so has part: feature:1089475-1089597:-1:exon
so has part: feature:1086299-1086322:-1:exon
so has part: feature:1084912-1085056:-1:exon
so has part: feature:1084550-1084649:-1:exon
so has part: feature:1078372-1078498:-1:exon
so has part: feature:1075394-1075576:-1:exon
so has part: feature:1075223-1075270:-1:exon
so has part: feature:1074840-1075027:-1:exon
so has part: feature:1074328-1074474:-1:exon
so has part: feature:1073979-1074058:-1:exon
so has part: feature:1073725-1073850:-1:exon
so has part: feature:1073165-1073282:-1:exon
so has part: feature:1072411-1072589:-1:exon
so has part: feature:1071800-1071875:-1:exon
so has part: feature:1071338-1071505:-1:exon
so has part: feature:1070571-1070661:-1:exon
so has part: feature:1069898-1070023:-1:exon
so has part: feature:1069382-1069443:-1:exon
so has part: feature:1068375-1068587:-1:exon
so has part: feature:1067744-1068094:-1:exon
so has part: feature:1066711-1066839:-1:exon
so has part: feature:1065700-1065944:-1:exon
so has part: feature:1065248-1065431:-1:exon
so has part: feature:1061750-1062761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1234859-1235183:-1:exon

position:1234859:-1
position: 1234859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1233999-1234099:-1:exon

position:1233999:-1
position: 1233999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234099:-1
position: 1234099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1131843-1131875:-1:exon

position:1131843:-1
position: 1131843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131875:-1
position: 1131875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1130623-1130637:-1:exon

position:1130623:-1
position: 1130623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130637:-1
position: 1130637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1130035-1130126:-1:exon

position:1130035:-1
position: 1130035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130126:-1
position: 1130126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1129014-1129112:-1:exon

position:1129014:-1
position: 1129014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129112:-1
position: 1129112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1127383-1127432:-1:exon

position:1127383:-1
position: 1127383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127432:-1
position: 1127432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1126716-1126773:-1:exon

position:1126716:-1
position: 1126716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126773:-1
position: 1126773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1125150-1125328:-1:exon

position:1125150:-1
position: 1125150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125328:-1
position: 1125328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1124277-1124348:-1:exon

position:1124277:-1
position: 1124277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124348:-1
position: 1124348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1118150-1118269:-1:exon

position:1118150:-1
position: 1118150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118269:-1
position: 1118269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1116205-1116250:-1:exon

position:1116205:-1
position: 1116205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116250:-1
position: 1116250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1115627-1115703:-1:exon

position:1115627:-1
position: 1115627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115703:-1
position: 1115703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1114623-1114760:-1:exon

position:1114623:-1
position: 1114623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114760:-1
position: 1114760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1110777-1110851:-1:exon

position:1110777:-1
position: 1110777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110851:-1
position: 1110851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1110469-1110570:-1:exon

position:1110469:-1
position: 1110469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110570:-1
position: 1110570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1109152-1109250:-1:exon

position:1109152:-1
position: 1109152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109250:-1
position: 1109250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1106367-1106409:-1:exon

position:1106367:-1
position: 1106367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106409:-1
position: 1106409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1089708-1089804:-1:exon

position:1089708:-1
position: 1089708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089804:-1
position: 1089804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
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SIO_000628: feature:1078372-1078498:-1:exon

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Arhgef11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef11
product: Rho guanine nucleotide exchange factor 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_013349809.2
SIO_010081: Arhgef11
subclass of: SO_0000673
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 43
SIO_000628: feature:1061750-1062761:-1:exon

Arhgef11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef11
product: Rho guanine nucleotide exchange factor 11, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_026784046.1
SIO_010081: Arhgef11
subclass of: SO_0000673
so part of: Arhgef11
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urn:…
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Arhgef11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef11
product: Rho guanine nucleotide exchange factor 11, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_026784045.1
SIO_010081: Arhgef11
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Arhgef11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef11
product: Rho guanine nucleotide exchange factor 11, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026784050.1
SIO_010081: Arhgef11
subclass of: SO_0000673
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Arhgef11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef11
product: Rho guanine nucleotide exchange factor 11, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026784051.1
SIO_010081: Arhgef11
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