Microtus ochrogaster isolate Prairie Vole_2 chromosome 19, MicOch1.0, whole genome shotgun sequence.
type: Entry
definition: Microtus ochrogaster isolate Prairie Vole_2 chromosome 19, MicOch1.0, whole genome shotgun sequence.
sequence version: NC_022021.1
sequence date: 2018-10-15
sequence: sequence
division: CON
label: NC_022021.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210839
dblink: SAMN00727831
keyword: WGS
keyword: RefSeq
source: Microtus ochrogaster (prairie vole)
organism: Microtus ochrogaster
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Arvicolinae; Microtus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001684.1.\nAssembly name: MicOch1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/12/07. The original whole-genome shotgun project has the\naccession AHZW00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: allpaths v. R41985 HAPLOIDIFY=True\n SPRS_WRITE_SEPS=True\nAssembly Name :: MicOch1.0\nGenome Coverage :: 94x\nSequencing Technology :: Illumina Hi-Seq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Microtus ochrogaster Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 65020687
topology: linear
so has quality: SO_0000987
location: 1..65020687
location: region:1-65020687:1
RO_0002162: 79684

NC_022021
type: RefSeq
SIO_000068: refseq

PRJNA210839
type: BioProject
SIO_000068: bioproject

SAMN00727831
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65020687:1
position: 65020687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-65020687:1:source
so part of: sequence
organism: Microtus ochrogaster
mol type: genomic DNA
isolate: Prairie Vole_2
chromosome: 19
sex: female

79684
type: Taxonomy
SIO_000068: taxonomy

LOC101980065
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38829..71131)
location: region:38829-71131:-1
so has part: feature:38829-71131:-1:exon
subclass of: SO_0000010

101980065
type: Gene
SIO_000068: ncbigene

position:38829:-1
position: 38829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71131:-1
position: 71131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38829-71131:-1:exon

LOC101980065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101980065
product: baculoviral IAP repeat-containing protein 1a-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349641.2
SIO_010081: LOC101980065
subclass of: SO_0000673
so part of: LOC101980065
location: complement(join(38829..39221,41695..41859,44141..44227,44521..44673,46526..46693,48815..50926,51504..51561,53304..53385,57224..57323,62076..62195,65455..65506,66316..66397,68448..68499,70567..71131))
location: region:38829-71131:-1
so has part: feature:70567-71131:-1:exon
so has part: feature:68448-68499:-1:exon
so has part: feature:66316-66397:-1:exon
so has part: feature:65455-65506:-1:exon
so has part: feature:62076-62195:-1:exon
so has part: feature:57224-57323:-1:exon
so has part: feature:53304-53385:-1:exon
so has part: feature:51504-51561:-1:exon
so has part: feature:48815-50926:-1:exon
so has part: feature:46526-46693:-1:exon
so has part: feature:44521-44673:-1:exon
so has part: feature:44141-44227:-1:exon
so has part: feature:41695-41859:-1:exon
so has part: feature:38829-39221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70567-71131:-1:exon

position:70567:-1
position: 70567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68448-68499:-1:exon

position:68448:-1
position: 68448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68499:-1
position: 68499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66316-66397:-1:exon

position:66316:-1
position: 66316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66397:-1
position: 66397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65455-65506:-1:exon

position:65455:-1
position: 65455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65506:-1
position: 65506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62076-62195:-1:exon

position:62076:-1
position: 62076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62195:-1
position: 62195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57224-57323:-1:exon

position:57224:-1
position: 57224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57323:-1
position: 57323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:53304-53385:-1:exon

position:53304:-1
position: 53304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53385:-1
position: 53385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:51504-51561:-1:exon

position:51504:-1
position: 51504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51561:-1
position: 51561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:48815-50926:-1:exon

position:48815:-1
position: 48815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50926:-1
position: 50926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46526-46693:-1:exon

position:46526:-1
position: 46526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46693:-1
position: 46693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44521-44673:-1:exon

position:44521:-1
position: 44521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44673:-1
position: 44673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:44141-44227:-1:exon

position:44141:-1
position: 44141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44227:-1
position: 44227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:41695-41859:-1:exon

position:41695:-1
position: 41695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41859:-1
position: 41859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:38829-39221:-1:exon

position:39221:-1
position: 39221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101980065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101980065
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(39058..39060),aa:OTHER)
product: LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 1a-like
translation: MATQAEASEERISEFDDDFVSQLSALLGVDAHRVLKRQEEKDHTLRMKMKKGFNPQMRSEAKRLKTFVTYDTFRSWTPQEMAAAGFYYTGVKLGVQCFCCSLILFCTRLRNLPIESHKRWHPDCAFLLGKDVGNIGKYDIRVKSPEKLRGSKARYQEEEARLESFENWPFYAHGTSPRVLSAAGFIFTVSTGAHGGQRSQNTFELQCEFLRSKKSSEEIAQYIKSYEGFVHFTGEHFVNSWVRRELPMVSAYCNDSVFANEELRLDTFKDWPHTSPVAVEALVRAGLFYTGWLTWERVFIKAHYTQERSVTVADHHPLKDQSPVCVFLQNLKSSAEVSPALQSHCALPEAMDSTGESNHGDPAAVHSTMADLAPREAQWFQEAESLSEQLRRAYTKATFRLMDLPEVCSSLGTDHLLGCDLFIISKHISRPVQEAMMLPEVFTNLSSVMCVEGETGSGKTTFLKKTAFLWASGYCPLLNRFQLVFYISLRSTRPDQGLADIIGAQLLEAGGCVSDMCLSSSIQQLRHRVLFLLDDYRGMDSLPQAIQTLITKNHLSRTCLLIAVHTNRARSIRPYLDTILEIQEFPLYNTVSVLQRVFSHDITRVEKFMEYLGKNEDLQGIHKTPLFVAAVCANWFQNPSDQSFHNVAVFKFYMKYLSLQHKATPEPLRATVSLCGQLALRGLFSSCFEFSSEDLTEAGVDEDEDLTTCLMSKFTAQRLSPVYRFLSPLFQEFLAAMRLTELLSSERKEDQDLGLDYLRQINSPLKAMSVYNNFLKYVSSHSSSKAAPMVVSHLLQLVDDKESLENMSENEDYGKLHQKTPQMMKLIKEMWQVYPEVFSSITSEHLLSVALNIAYESNTVTACSPIISQFLRGRTLALNVLNFQYFEDKPESLLLLRSVKVFIHGKKMPPRLGYSVMEKCLETLQPPTVDEDYAPAFEHMEEWVKNLAKNEDNVRNFINSQPLHPPNISAGYWKLSPKWYKIPRLEIAVANMDPADGALLQFLMEVFSASQNIELHLNHSNGFLESIHPALELHKSSVTKCSMCGLELSTAEQELLLTLLALQSLEVSGTNQLPDQLFSNLDKFPNLKELSVRLTGKPDVLSVIPGDFPNLHHMEKLCIETSTESDISKLVKLIQNSPNLHVFCLKDTFFSDFESLVTVLASCKKLREIEFSGGCFETMPFVNILPKFVSLKVLNLTCQQIPDKETSETFAQALGSLRNLEELFLPTGDGIQQVARLIVRQCLQLQCLRVLAFHHTLDDDSVMEIAKGVTSGAFQKLETLDLSVNHKITEEGYRNFFQTLDNLPNLQVLNICRSLPERIXVQATTVKALSQCVSRLPSLTRLEMLSWLLDEEDLRVINAVKERHPQSKHLTVLWKWIVPFSPVIQK
SIO_010081: LOC101980065
subclass of: SO_0000673
so part of: LOC101980065
location: complement(join(38857..39221,41695..41859,44141..44227,44521..44673,46526..46693,48815..50926,51504..51561,53304..53385,57224..57323,62076..62195,65455..65506,66316..66397,68448..68499,70567..71131))
location: region:38857-71131:-1
so has part: feature:70567-71131:-1:exon
so has part: feature:68448-68499:-1:exon
so has part: feature:66316-66397:-1:exon
so has part: feature:65455-65506:-1:exon
so has part: feature:62076-62195:-1:exon
so has part: feature:57224-57323:-1:exon
so has part: feature:53304-53385:-1:exon
so has part: feature:51504-51561:-1:exon
so has part: feature:48815-50926:-1:exon
so has part: feature:46526-46693:-1:exon
so has part: feature:44521-44673:-1:exon
so has part: feature:44141-44227:-1:exon
so has part: feature:41695-41859:-1:exon
so has part: feature:38857-39221:-1:exon

XP_013205095.1
type: Protein
SIO_000068: ncbiprotein

position:38857:-1
position: 38857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70567-71131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68448-68499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66316-66397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65455-65506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62076-62195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57224-57323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53304-53385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51504-51561:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48815-50926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46526-46693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44521-44673:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:44141-44227:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41695-41859:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:38857-39221:-1:exon

LOC101984104
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(99391..100577)
location: region:99391-100577:-1
so has part: feature:99391-100577:-1:exon

101984104
type: Gene
SIO_000068: ncbigene

position:99391:-1
position: 99391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100577:-1
position: 100577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99391-100577:-1:exon

LOC101984104
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984104
subclass of: SO_0000673
so part of: LOC101984104
location: complement(99391..100577)
location: region:99391-100577:-1
so has part: feature:99391-100577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99391-100577:-1:exon

Naip
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Naip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123736..172605
location: region:123736-172605:1
so has part: feature:123736-172605:1:exon
subclass of: SO_0000010

101984383
type: Gene
SIO_000068: ncbigene

position:123736:1
position: 123736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172605:1
position: 172605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123736-172605:1:exon

Naip
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Naip
product: NLR family apoptosis inhibitory protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356419.2
SIO_010081: Naip
subclass of: SO_0000673
so part of: Naip
location: join(123736..123803,130932..131498,132863..132962,135621..135702,136515..136566,139806..139925,143660..143759,150775..150856,152963..153020,153694..155805,161014..161181,162756..162908,163203..163289,166367..166531,171457..172605)
location: region:123736-172605:1
so has part: feature:123736-123803:1:exon
so has part: feature:130932-131498:1:exon
so has part: feature:132863-132962:1:exon
so has part: feature:135621-135702:1:exon
so has part: feature:136515-136566:1:exon
so has part: feature:139806-139925:1:exon
so has part: feature:143660-143759:1:exon
so has part: feature:150775-150856:1:exon
so has part: feature:152963-153020:1:exon
so has part: feature:153694-155805:1:exon
so has part: feature:161014-161181:1:exon
so has part: feature:162756-162908:1:exon
so has part: feature:163203-163289:1:exon
so has part: feature:166367-166531:1:exon
so has part: feature:171457-172605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123736-123803:1:exon

position:123803:1
position: 123803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130932-131498:1:exon

position:130932:1
position: 130932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131498:1
position: 131498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132863-132962:1:exon

position:132863:1
position: 132863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132962:1
position: 132962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135621-135702:1:exon

position:135621:1
position: 135621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135702:1
position: 135702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136515-136566:1:exon

position:136515:1
position: 136515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136566:1
position: 136566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:139806-139925:1:exon

position:139806:1
position: 139806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139925:1
position: 139925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:143660-143759:1:exon

position:143660:1
position: 143660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143759:1
position: 143759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:150775-150856:1:exon

position:150775:1
position: 150775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150856:1
position: 150856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:152963-153020:1:exon

position:152963:1
position: 152963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153020:1
position: 153020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:153694-155805:1:exon

position:153694:1
position: 153694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155805:1
position: 155805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:161014-161181:1:exon

position:161014:1
position: 161014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161181:1
position: 161181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:162756-162908:1:exon

position:162756:1
position: 162756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162908:1
position: 162908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:163203-163289:1:exon

position:163203:1
position: 163203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163289:1
position: 163289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:166367-166531:1:exon

position:166367:1
position: 166367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166531:1
position: 166531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:171457-172605:1:exon

position:171457:1
position: 171457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Naip
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Naip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: baculoviral IAP repeat-containing protein 1
translation: MATQGEAFEERICEFDDESASELSALLGVDALQVLKRQQEEDHKLRMKMKKGFNPQMRNEAKRLKTFVTYDTFRTWTPQEMAAAGFYHTGVKLGVQCFCCSLILFCTRLRNLPIESHKKLHPDCAFLLGKDVGNIGKYDIRVRSPEKLRGGKARYQEEEARLESFENWPFYAHGTSPRVLSAAGFVFTGKRDTVQCFSCAGCLGNWEEGDDPWKEHAKWFPKCEFLRSKKSSEEIAQYIKSYEGFVHVTGEHFVNSWVRRELPMVSAYCNDSVFANEELRLDTFKDWPHTSPVAVEALARAGLFYTGKKDTVRCFSCEGCMCNWEEGDNPLEDHTKFFPNCVFLQNLKSSAEMSPALQSHCALPEAMDSTRESNHGDPAAVHSTMADLAQREAQWFQEAKSLSEQLRRAYTKATFRHMDLPEVCSSLGTDHLLGCDLTIISKHISRPVQEATMLPEVFTNLSSVMCVEGETGSGKTTFLKKTAFLWASGCCPLLNRFQLVFYISLRSTRPDQGLADIIGAQLLEAGGCVSDMCLSSSIQQLRHQVLFLLDDYRGMDSLPQAIQTLITKNYLSRTCLLIAVHTTRARAIRPYLDTSLEIQEFPFYNTVSVLRKFFSHNIIRVRKFINYFGKNVDLQGIHKTPLFVAAVCANWFQNPSDQSFHDVAVFKSYMKYLSLQHKATPEPLKATMSSCGQLALRGLFSSCFEFSSEDLIEAGVNEDEDLTTCLMSKFSAQRLSPVYRFLSPLFQEFLAAMRLTELLSSERKEDQDLGLDYLRQINSSLKAMGVYNNFLKYVSSHPSSKAAPMVVSHLLQLVDDKESLENMSEDEDYRKLHPETSERIELIRGLWQLFPESFFSFISENLLSVALNFAYESKAVAACSPFILQFLRGRTLALNCLNFQYFWDYPESLLLLKSIEVSISGNNRVRAIDFSLMEKCFAKVQPPTIDEDYASAFQPMSECEKNLAEKEAIIKNYVDIQHQAPPNVSAGYWKLSPKQYKIPRLEVAVGNMGPADQALLQFLMEVFSASQNIELHLNHSNGFLESICPALELHKSSVTKCSMCGLELSAAEQELLLTLPALQSLEVSGTNQLPDLLFANLDRFPNLKELSVSLTGKPDVLSVIPGDFPSLHHMEKLCIQTSAESDISKLVKLIQNSPNLHVFRLKDTVFSDFESLVTALASCKKLREIEFSRQCFETMPFVNILPKFVSLKILDLKCQQFPDKETSEKFAQALGSLRNLEELLLPTGDGIQQVARLIVQQCLQLQHLRVLYFVETLDDDSVMEIAKGATSGGLQKLENLDLSMNHKITEEGYRNFFQVLDNMPNLQNLDISRHLPERIQVQATTVKALSQCVSRLPSLTRLGMLSWLLDEEDLRVINAVKERHPQSKYLIVHWRWVVPFSPVIQK
SIO_010081: Naip
subclass of: SO_0000673
so part of: Naip
location: join(130934..131498,132863..132962,135621..135702,136515..136566,139806..139925,143660..143759,150775..150856,152963..153020,153694..155805,161014..161181,162756..162908,163203..163289,166367..166531,171457..171821)
location: region:130934-171821:1
so has part: feature:130934-131498:1:exon
so has part: feature:132863-132962:1:exon
so has part: feature:135621-135702:1:exon
so has part: feature:136515-136566:1:exon
so has part: feature:139806-139925:1:exon
so has part: feature:143660-143759:1:exon
so has part: feature:150775-150856:1:exon
so has part: feature:152963-153020:1:exon
so has part: feature:153694-155805:1:exon
so has part: feature:161014-161181:1:exon
so has part: feature:162756-162908:1:exon
so has part: feature:163203-163289:1:exon
so has part: feature:166367-166531:1:exon
so has part: feature:171457-171821:1:exon

XP_005356476.1
type: Protein
SIO_000068: ncbiprotein

position:130934:1
position: 130934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171821:1
position: 171821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130934-131498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132863-132962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135621-135702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136515-136566:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139806-139925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143660-143759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150775-150856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152963-153020:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153694-155805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161014-161181:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:162756-162908:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163203-163289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166367-166531:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:171457-171821:1:exon

Smn1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Smn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(176027..188247)
location: region:176027-188247:-1
so has part: feature:176027-188247:-1:exon
subclass of: SO_0000010

101984856
type: Gene
SIO_000068: ncbigene

position:176027:-1
position: 176027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188247:-1
position: 188247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176027-188247:-1:exon

Smn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Smn1
product: survival of motor neuron 1, telomeric
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013349654.2
SIO_010081: Smn1
subclass of: SO_0000673
so part of: Smn1
location: complement(join(176027..177562,179354..179404,181513..181623,182930..183022,185189..185335,185529..185729,186576..186695,186900..186971,188147..188247))
location: region:176027-188247:-1
so has part: feature:188147-188247:-1:exon
so has part: feature:186900-186971:-1:exon
so has part: feature:186576-186695:-1:exon
so has part: feature:185529-185729:-1:exon
so has part: feature:185189-185335:-1:exon
so has part: feature:182930-183022:-1:exon
so has part: feature:181513-181623:-1:exon
so has part: feature:179354-179404:-1:exon
so has part: feature:176027-177562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188147-188247:-1:exon

position:188147:-1
position: 188147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186900-186971:-1:exon

position:186900:-1
position: 186900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186971:-1
position: 186971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186576-186695:-1:exon

position:186576:-1
position: 186576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186695:-1
position: 186695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185529-185729:-1:exon

position:185529:-1
position: 185529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185729:-1
position: 185729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:185189-185335:-1:exon

position:185189:-1
position: 185189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185335:-1
position: 185335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182930-183022:-1:exon

position:182930:-1
position: 182930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183022:-1
position: 183022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181513-181623:-1:exon

position:181513:-1
position: 181513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181623:-1
position: 181623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179354-179404:-1:exon

position:179354:-1
position: 179354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179404:-1
position: 179404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:176027-177562:-1:exon

position:177562:-1
position: 177562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Smn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Smn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: survival motor neuron protein
translation: MAMGSGGAVSEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDICETSDKPKVTARRKPPKKNKNQKKNATAPLKQWKVGDKCSAVWSEDSCIYPATISSIDFKRETCVVVYTGYGNREEQNLSDLLSPTCEVANNTGQSTHENESPASTDESENSSRSLRSKPQSKSKAAPWTSFLPPPPPMPGSGLGPGKPGLRFNGPPPPPPPPPPFLPCWMPPFPSGPPIIPPPPPISPDCMDDTDALGSMLISWYMSGYHTGYYMGFRQNKKEGKCSHAN
SIO_010081: Smn1
subclass of: SO_0000673
so part of: Smn1
location: complement(join(179357..179404,181513..181623,182930..183022,185189..185335,185529..185729,186576..186695,186900..186971,188147..188218))
location: region:179357-188218:-1
so has part: feature:188147-188218:-1:exon
so has part: feature:186900-186971:-1:exon
so has part: feature:186576-186695:-1:exon
so has part: feature:185529-185729:-1:exon
so has part: feature:185189-185335:-1:exon
so has part: feature:182930-183022:-1:exon
so has part: feature:181513-181623:-1:exon
so has part: feature:179357-179404:-1:exon

XP_013205108.1
type: Protein
SIO_000068: ncbiprotein

position:179357:-1
position: 179357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188218:-1
position: 188218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188147-188218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186900-186971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186576-186695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185529-185729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185189-185335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182930-183022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181513-181623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179357-179404:-1:exon

Serf1a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Serf1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(192514..>201867)
location: region:192514-201867:-1
so has part: feature:192514-201867:-1:exon
subclass of: SO_0000010

101985150
type: Gene
SIO_000068: ncbigene

position:192514:-1
position: 192514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201867:-1
position: 201867
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192514-201867:-1:exon

Serf1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Serf1a
product: small EDRK-rich factor 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005356421.2
SIO_010081: Serf1a
subclass of: SO_0000673
so part of: Serf1a
location: complement(join(192514..192779,199172..199280,201603..>201867))
location: region:192514-201867:-1
so has part: feature:201603-201867:-1:exon
so has part: feature:199172-199280:-1:exon
so has part: feature:192514-192779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201603-201867:-1:exon

position:201603:-1
position: 201603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199172-199280:-1:exon

position:199172:-1
position: 199172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199280:-1
position: 199280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192514-192779:-1:exon

position:192779:-1
position: 192779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Serf1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Serf1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small EDRK-rich factor 1
translation: PPPRVGAGGAWSRGSKRSRARTRSGSPSTPRLLWVGGRGGWLTEQGRTVGSRGAQLPQRRAGTAAKRASGRCFSESLSSRLRPVVGMARGNQRELARQKNMKKTQEISKGKRKEDCLTASQRKQRDSEIMQQKQKIANEKKSMQTREK
SIO_010081: Serf1a
subclass of: SO_0000673
so part of: Serf1a
location: complement(join(192707..192779,199172..199280,201603..>201867))
location: region:192707-201867:-1
so has part: feature:201603-201867:-1:exon
so has part: feature:199172-199280:-1:exon
so has part: feature:192707-192779:-1:exon

XP_005356478.2
type: Protein
SIO_000068: ncbiprotein

position:192707:-1
position: 192707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201603-201867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199172-199280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192707-192779:-1:exon

Bdp1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Bdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 210147..302828
location: region:210147-302828:1
so has part: feature:210147-302828:1:exon
subclass of: SO_0000010

101985435
type: Gene
SIO_000068: ncbigene

position:210147:1
position: 210147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302828:1
position: 302828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210147-302828:1:exon

Bdp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bdp1
product: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_013349674.2
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210147..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264807..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..302828)
location: region:210147-302828:1
so has part: feature:210147-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
so has part: feature:218048-218107:1:exon
so has part: feature:221411-221542:1:exon
so has part: feature:223543-223676:1:exon
so has part: feature:227128-227222:1:exon
so has part: feature:228583-228637:1:exon
so has part: feature:234722-234859:1:exon
so has part: feature:236017-236301:1:exon
so has part: feature:239167-239308:1:exon
so has part: feature:240212-240361:1:exon
so has part: feature:243730-243889:1:exon
so has part: feature:247076-247167:1:exon
so has part: feature:248991-249198:1:exon
so has part: feature:250526-250656:1:exon
so has part: feature:254142-255315:1:exon
so has part: feature:255993-256171:1:exon
so has part: feature:256739-256961:1:exon
so has part: feature:258937-259115:1:exon
so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264807-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
so has part: feature:272554-272785:1:exon
so has part: feature:273325-273485:1:exon
so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-302828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210147-210579:1:exon

position:210579:1
position: 210579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

position:214146:1
position: 214146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214422:1
position: 214422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

position:216787:1
position: 216787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216896:1
position: 216896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

position:218048:1
position: 218048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218107:1
position: 218107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:221411-221542:1:exon

position:221411:1
position: 221411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221542:1
position: 221542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

position:223543:1
position: 223543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223676:1
position: 223676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

position:227128:1
position: 227128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227222:1
position: 227222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

position:228583:1
position: 228583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228637:1
position: 228637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

position:234722:1
position: 234722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234859:1
position: 234859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:236017-236301:1:exon

position:236017:1
position: 236017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236301:1
position: 236301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:239167-239308:1:exon

position:239167:1
position: 239167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239308:1
position: 239308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:240212-240361:1:exon

position:240212:1
position: 240212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240361:1
position: 240361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:243730-243889:1:exon

position:243730:1
position: 243730
reference: sequence
type: ForwardStrandPosition
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position:243889:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:247076-247167:1:exon

position:247076:1
position: 247076
reference: sequence
type: ForwardStrandPosition
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position:247167:1
position: 247167
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:248991-249198:1:exon

position:248991:1
position: 248991
reference: sequence
type: ForwardStrandPosition
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position:249198:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:250526-250656:1:exon

position:250526:1
position: 250526
reference: sequence
type: ForwardStrandPosition
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position:250656:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:254142-255315:1:exon

position:254142:1
position: 254142
reference: sequence
type: ForwardStrandPosition
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position:255315:1
position: 255315
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:255993-256171:1:exon

position:255993:1
position: 255993
reference: sequence
type: ForwardStrandPosition
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position:256171:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:256739-256961:1:exon

position:256739:1
position: 256739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256961:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:258937-259115:1:exon

position:258937:1
position: 258937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259115:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:259840-260044:1:exon

position:259840:1
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reference: sequence
type: ForwardStrandPosition
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position:260044:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:261505-261611:1:exon

position:261505:1
position: 261505
reference: sequence
type: ForwardStrandPosition
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position:261611:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:263396-263597:1:exon

position:263396:1
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reference: sequence
type: ForwardStrandPosition
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position:263597:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:263815-264008:1:exon

position:263815:1
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reference: sequence
type: ForwardStrandPosition
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position:264008:1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:264807-265191:1:exon

position:264807:1
position: 264807
reference: sequence
type: ForwardStrandPosition
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position:265191:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:268271-268393:1:exon

position:268271:1
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reference: sequence
type: ForwardStrandPosition
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position:268393:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:270624-270660:1:exon

position:270624:1
position: 270624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270660:1
position: 270660
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:271075-271167:1:exon

position:271075:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271167:1
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:272554-272785:1:exon

position:272554:1
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reference: sequence
type: ForwardStrandPosition
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position:272785:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:273325-273485:1:exon

position:273325:1
position: 273325
reference: sequence
type: ForwardStrandPosition
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position:273485:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:279297-279438:1:exon

position:279297:1
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reference: sequence
type: ForwardStrandPosition
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position:279438:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

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position: 279631
reference: sequence
type: ForwardStrandPosition
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position:279814:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:282182-282245:1:exon

position:282182:1
position: 282182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282245:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:282750-282936:1:exon

position:282750:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282936:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

position:290772:1
position: 290772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290973:1
position: 290973
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

position:294481:1
position: 294481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294517:1
position: 294517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

position:296708:1
position: 296708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296972:1
position: 296972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

position:298464:1
position: 298464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298713:1
position: 298713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:299851-302828:1:exon

position:299851:1
position: 299851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Bdp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bdp1
product: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_013349675.2
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210147..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..302828)
location: region:210147-302828:1
so has part: feature:210147-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
so has part: feature:218048-218107:1:exon
so has part: feature:221411-221542:1:exon
so has part: feature:223543-223676:1:exon
so has part: feature:227128-227222:1:exon
so has part: feature:228583-228637:1:exon
so has part: feature:234722-234859:1:exon
so has part: feature:239167-239308:1:exon
so has part: feature:240212-240361:1:exon
so has part: feature:243730-243889:1:exon
so has part: feature:247076-247167:1:exon
so has part: feature:248991-249198:1:exon
so has part: feature:250526-250656:1:exon
so has part: feature:254142-255315:1:exon
so has part: feature:255993-256171:1:exon
so has part: feature:256739-256961:1:exon
so has part: feature:258937-259115:1:exon
so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264804-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
so has part: feature:272554-272785:1:exon
so has part: feature:273325-273485:1:exon
so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-302828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210147-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221411-221542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:250526-250656:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:256739-256961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:264804-265191:1:exon

position:264804:1
position: 264804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:268271-268393:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:299851-302828:1:exon

Bdp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bdp1
product: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_026783697.1
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210147..210579,214146..214422,216787..216896,218048..218107,221414..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..302828)
location: region:210147-302828:1
so has part: feature:210147-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
so has part: feature:218048-218107:1:exon
so has part: feature:221414-221542:1:exon
so has part: feature:223543-223676:1:exon
so has part: feature:227128-227222:1:exon
so has part: feature:228583-228637:1:exon
so has part: feature:234722-234859:1:exon
so has part: feature:236017-236301:1:exon
so has part: feature:239167-239308:1:exon
so has part: feature:240212-240361:1:exon
so has part: feature:243730-243889:1:exon
so has part: feature:247076-247167:1:exon
so has part: feature:248991-249198:1:exon
so has part: feature:250526-250656:1:exon
so has part: feature:254142-255315:1:exon
so has part: feature:255993-256171:1:exon
so has part: feature:256739-256961:1:exon
so has part: feature:258937-259115:1:exon
so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264804-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
so has part: feature:272554-272785:1:exon
so has part: feature:273325-273485:1:exon
so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-302828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210147-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221414-221542:1:exon

position:221414:1
position: 221414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236017-236301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250526-250656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256739-256961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:264804-265191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:268271-268393:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:299851-302828:1:exon

Bdp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bdp1
product: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_013349672.2
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210147..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..302827)
location: region:210147-302827:1
so has part: feature:210147-210579:1:exon
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so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-302827:1:exon

position:302827:1
position: 302827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210147-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 16
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:256739-256961:1:exon

urn:…
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SIO_000628: feature:258937-259115:1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

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urn:…
SIO_000300: 34
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urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:299851-302827:1:exon

Bdp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bdp1
product: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013349673.2
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210147..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256742..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..302826)
location: region:210147-302826:1
so has part: feature:210147-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
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so has part: feature:223543-223676:1:exon
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so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-302826:1:exon

position:302826:1
position: 302826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210147-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221411-221542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236017-236301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250526-250656:1:exon

urn:…
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SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256742-256961:1:exon

position:256742:1
position: 256742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 25
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SIO_000300: 26
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urn:…
SIO_000300: 27
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:299851-302826:1:exon

Bdp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TFIIIB component B'' homolog isoform X1
translation: MFRRARLSVKPNVRPGGGSRGSAAPNPQRVQEAPRPPEPATESAPKPAEPTDVPAPAVASGGAEPQEKAPRSSDAKTGDENNVEESSKPSSTVSQRRKRVPSTSSLAKPTVSVPSQCQPLSAVNHDALQPSPAPAKDKPPCSDRYRIYKARKLREMLKEELRKEKKQWKNKFATNESQRPPDRSKMTMRDFIYYLPDNNPMTSSVEQEKKTEKSLAPTPARDRQDNQSTQDADDNGDVEERADDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNEETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDLDFFAHLLQKVLAEEEKRKKSTKCQSSKEKSSKPRKNVQAKKVTSEEVNDDPDESVNSNSSDPERSQKDTQTVAEEEPPTSTGQDLEQTMLEQDQNQEKRRRRKKQNETNKQEATNLVGNVRVQSSSPEAEVHKNTSPEENEGECNEEQTPSFPRCIDDIAESFSPSSETVELRTGSSPSTCNQQDIMPLASESSESSAADLPLSEVAGAASCEVNNAGTEERSVDLENRPLETEQAENVKPKSRSRLQRPKPNLSRAVGKKSVVSQDTQDERSKISPSETSAEKNHVEKERLNVPENFGTENTERENLGAETVSDLSEKSCVQEPKVLRPARLLRGRMQRPRPTIQKATGREETPTPQGKIGAHVEKDEDESCVDREQSESCVVIPEQMENESFKNLLCEDVTSQPEEKDASANVHSDEPSILNECPSIQEDSKANKLKQAPVLRMRFQKPKPNTGRKRMTSKEGVSEQVPISGEITTLEETAKPDSSPRKKMPIVTITVTPATNELESDLKDTGKNDTSFNMKMSEMTEVTMEMEIGLETIEREISPGETGAEMIDIPMETEIGLKASLNEISPMENMSELIDTTEEIYTNLEETGRRETFSQENGPKEVSPISEMETDLQETGKDLPTGDRTTDMIDGTEKGEAYLEDTERREISVPVEETEEPKTMGEMETHLEEFGEKAVGSPAEQLASELDVCSSTHEEEAGVELSAVEEKKLDLKGTGERDVSTTVMVSTEMTATEESSGDLKETGEASISWERGPGEIRVGKHMVADLEETEKVDISPREHEPEEHSSRQLVADVIQSSSNDSSPGVSVDRKNISNKISVMPTFEEQNENSDMEVSSHLSHVKSSQNSADLETVAAIQPADVLEQFSGTSLSRSLPQEPKPLEVKPAPFLRSRFKKPKPNLSRAALKRATPEAEHRVPGKKSEADTVETVALQQDSEQSGSLSSQHEVPFLMTSRENDNPRQEEVDAVILPSMQTGKDSSIPDSCEPKEDSQSTQKQENGLVVPVGTQKMNMVTQETKQSVGHAFPVRGRLQRPRPNVQKARQRQITEKSEAEGVAKNEGSELQKDETKKVLTVANTHIEGEVEAMSLGVSEYTVNESHRHVVPVDEQKRHENEPHVPSPAQLLRRRFQKAKPNLGGAHHRKEQPVVEKGTTDQSTDPKPEDHEPQKGDLDIQLPLKEKTEILTPLEVSAGKDCIVPEASASPTNDAQLTAVPSGGARDEIVEDHPTSSLGLEEQGLSKQISSPQLLKESNCSKTAAHRRTPLSSASECETDHSGKRAHRKMKSNVTKGRGPKRIRGKTAKKEPRASKSMLVTLRASQKEDEEDAEDFDSDFEEETYHLAPEELNKAPVFVPVGLRSPEPVSAQIEETMEELEITMDVADIGCVTVVEHQLSNTDPTTEDVQPEEDLHSPAFEMVIGEQTPEEPGSSDGSAEAAITLLTMGDIVLQSEIITEQGDVGVCVFPDVHSKDKSHVPFSPDNVNHKIVHEYQEVSSPVISMSPASFEENKIVSKEQSTREEEADVMGEIMENTLSTRSTAPAVTKHVGMESHFITAEPSPEKILGVYGLEDHQEVASFCVTKGTEVEIQRESEENDSKALESEDKSLEPAETKEQNQLPCVHDVAVTSL…
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210362..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..299982)
location: region:210362-299982:1
so has part: feature:210362-210579:1:exon
so has part: feature:214146-214422:1:exon
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so has part: feature:223543-223676:1:exon
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so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264804-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
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so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-299982:1:exon

XP_013205126.1
type: Protein
SIO_000068: ncbiprotein

position:210362:1
position: 210362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299982:1
position: 299982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210362-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221411-221542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

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SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236017-236301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250526-250656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256739-256961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:264804-265191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:268271-268393:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:299851-299982:1:exon

Bdp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TFIIIB component B'' homolog isoform X3
translation: MFRRARLSVKPNVRPGGGSRGSAAPNPQRVQEAPRPPEPATESAPKPAEPTDVPAPAVASGGAEPQEKAPRSSDAKTGDENNVEESSKPSSTVSQRRKRVPSTSSLAKPTVSVPSQCQPLSAVNHDALQPSPAPAKDKPPCSDRYRIYKARKLREMLKEELRKEKKQWKNKFATNESQRPPDRSKMTMRDFIYYLPDNNPMTSSVEQEKKTEKSLAPTPARDRQDNQSTQDADDNGDVEERADDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNEETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDLDFFAHLLQKVLAEEEKRKKSTKCQSSKEKSSKPRKNVQAKKVTSEEVNDDPDESVNSNSSDPERSQKDTQTVAEEEPPTSTGQDLEQTMLEQDQNQEKRRRRKKQNETNKQEATNLVGNVRVQSSSPEAEVHKNTSPEENEGECNEEQTPSFPRCIDDIAESFSPSSETVELRTGSSPSTCNQQDIMPLASESSESSAADLPLSEVAGAASCEVNNAGTEERSVDLENRPLETEQAENVKPKSRSRLQRPKPNLSRAVGKKSVVSQDTQDERSKISPSETSAEKNHVEKERLNVPENFGTENTERENLGAETVSDLSEKSCVQEPKVLRPARLLRGRMQRPRPTIQKATGREETPTPQGKIGAHVEKDEDESCVDREQSESCVVIPEQMENESFKNLLCEDVTSQPEEKDASANVHSDEPSILNECPSIQEDSKANKLKQAPVLRMRFQKPKPNTGRKRMTSKEGVSEQVPISGEITTLEETAKPDSSPRKKMPIVTITVTPATNELESDLKDTGKNDTSFNMKMSEMTEVTMEMEIGLETIEREISPGETGAEMIDIPMETEIGLKASLNEISPMENMSELIDTTEEIYTNLEETGRRETFSQENGPKEVSPISEMETDLQETGKDLPTGDRTTDMIDGTEKGEAYLEDTERREISVPVEETEEPKTMGEMETHLEEFGEKAVGSPAEQLASELDVCSSTHEEEAGVELSAVEEKKLDLKGTGERDVSTTVMVSTEMTATEESSGDLKETGEASISWERGPGEIRVGKHMVADLEETEKVDISPREHEPEEHSSRQLVADVIQSSSNDSSPGVSVDRKNISNKISVMPTFEEQNENSDMEVSSHLSHVKSSQNSADLETVAAIQPADVLEQFSGTSLSRSLPQEPKPLEVKPAPFLRSRFKKPKPNLSRAALKRATPEAEHRVPGKKSEADTVETVALQQDSEQSGSLSSQHEVPFLMTSRENDNPRQEEVDAVILPSMQTGKDSSIPDSCEPKEDSQSTQKQENGLVVPVGTQKMNMVTQETKQSVGHAFPVRGRLQRPRPNVQKARQRQITEKSEAEGVAKNEGSELQKDETKKVLTVANTHIEGEVEAMSLGVSEYTVNESHRHVVPVDEQKRHENEPHVPSPAQLLRRRFQKAKPNLGGAHHRKEQPVVEKGTTDQSTDPKPEDHEPQKGDLDIQLPLKEKTEILTPLEVSAGKDCIVPEASASPTNDAQLTAVPSGGARDEIVEDHPTSSLGLEEQGLSKQISPQLLKESNCSKTAAHRRTPLSSASECETDHSGKRAHRKMKSNVTKGRGPKRIRGKTAKKEPRASKSMLVTLRASQKEDEEDAEDFDSDFEEETYHLAPEELNKAPVFVPVGLRSPEPVSAQIEETMEELEITMDVADIGCVTVVEHQLSNTDPTTEDVQPEEDLHSPAFEMVIGEQTPEEPGSSDGSAEAAITLLTMGDIVLQSEIITEQGDVGVCVFPDVHSKDKSHVPFSPDNVNHKIVHEYQEVSSPVISMSPASFEENKIVSKEQSTREEEADVMGEIMENTLSTRSTAPAVTKHVGMESHFITAEPSPEKILGVYGLEDHQEVASFCVTKGTEVEIQRESEENDSKALESEDKSLEPAETKEQNQLPCVHDVAVTSLS…
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210362..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264807..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..299982)
location: region:210362-299982:1
so has part: feature:210362-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
so has part: feature:218048-218107:1:exon
so has part: feature:221411-221542:1:exon
so has part: feature:223543-223676:1:exon
so has part: feature:227128-227222:1:exon
so has part: feature:228583-228637:1:exon
so has part: feature:234722-234859:1:exon
so has part: feature:236017-236301:1:exon
so has part: feature:239167-239308:1:exon
so has part: feature:240212-240361:1:exon
so has part: feature:243730-243889:1:exon
so has part: feature:247076-247167:1:exon
so has part: feature:248991-249198:1:exon
so has part: feature:250526-250656:1:exon
so has part: feature:254142-255315:1:exon
so has part: feature:255993-256171:1:exon
so has part: feature:256739-256961:1:exon
so has part: feature:258937-259115:1:exon
so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264807-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
so has part: feature:272554-272785:1:exon
so has part: feature:273325-273485:1:exon
so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-299982:1:exon

XP_013205128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210362-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221411-221542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236017-236301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250526-250656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256739-256961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:264807-265191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:268271-268393:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:299851-299982:1:exon

Bdp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TFIIIB component B'' homolog isoform X2
translation: MFRRARLSVKPNVRPGGGSRGSAAPNPQRVQEAPRPPEPATESAPKPAEPTDVPAPAVASGGAEPQEKAPRSSDAKTGDENNVEESSKPSSTVSQRRKRVPSTSSLAKPTVSVPSQCQPLSAVNHDALQPSPAPAKDKPPCSDRYRIYKARKLREMLKEELRKEKKQWKNKFATNESQRPPDRSKMTMRDFIYYLPDNNPMTSSVEQEKKTEKSLAPTPARDRQDNQSTQDADDNGDVEERADDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNEETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDLDFFAHLLQKVLAEEEKRKKSTKCQSSKEKSSKPRKNVQAKKVTSEEVNDDPDESVNSNSSDPERSQKDTQTVAEEEPPTSTGQDLEQTMLEQDQNQEKRRRRKKQNETNKQEATNLVGNVRVQSSSPEAEVHKNTSPEENEGECNEEQTPSFPRCIDDIAESFSPSSETVELRTGSSPSTCNQQDIMPLASESSESSAADLPLSEVAGAASCEVNNAGTEERSVDLENRPLETEQAENVKPKSRSRLQRPKPNLSRAVGKKSVVSQDTQDERSKISPSETSAEKNHVEKERLNVPENFGTENTERENLGAETVSDLSEKSCVQEPKVLRPARLLRGRMQRPRPTIQKATGREETPTPQGKIGAHVEKDEDESCVDREQSESCVVIPEQMENESFKNLLCEDVTSQPEEKDASANVHSDEPSILNECPSIQEDSKANKLKQAPVLRMRFQKPKPNTGRKRMTSKEGVSEQVPISGEITTLEETAKPDSSPRKKMPIVTITVTPATNELESDLKDTGKNDTSFNMKMSEMTEVTMEMEIGLETIEREISPGETGAEMIDIPMETEIGLKASLNEISPMENMSELIDTTEEIYTNLEETGRRETFSQENGPKEVSPISEMETDLQETGKDLPTGDRTTDMIDGTEKGEAYLEDTERREISVPVEETEEPKTMGEMETHLEEFGEKAVGSPAEQLASELDVCSSTHEEEAGVELSAVEEKKLDLKGTGERDVSTTVMVSTEMTATEESSGDLKETGEASISWERGPGEIRVGKHMVADLEETEKVDISPREHEPEEHSSRQLVADVIQSSSNDSSPGVSVDRKNISNKISVMPTFEEQNENSDMEVSSHLSHVKSSQNSADLETVAAIQPADVLEQFSGTSLRSLPQEPKPLEVKPAPFLRSRFKKPKPNLSRAALKRATPEAEHRVPGKKSEADTVETVALQQDSEQSGSLSSQHEVPFLMTSRENDNPRQEEVDAVILPSMQTGKDSSIPDSCEPKEDSQSTQKQENGLVVPVGTQKMNMVTQETKQSVGHAFPVRGRLQRPRPNVQKARQRQITEKSEAEGVAKNEGSELQKDETKKVLTVANTHIEGEVEAMSLGVSEYTVNESHRHVVPVDEQKRHENEPHVPSPAQLLRRRFQKAKPNLGGAHHRKEQPVVEKGTTDQSTDPKPEDHEPQKGDLDIQLPLKEKTEILTPLEVSAGKDCIVPEASASPTNDAQLTAVPSGGARDEIVEDHPTSSLGLEEQGLSKQISSPQLLKESNCSKTAAHRRTPLSSASECETDHSGKRAHRKMKSNVTKGRGPKRIRGKTAKKEPRASKSMLVTLRASQKEDEEDAEDFDSDFEEETYHLAPEELNKAPVFVPVGLRSPEPVSAQIEETMEELEITMDVADIGCVTVVEHQLSNTDPTTEDVQPEEDLHSPAFEMVIGEQTPEEPGSSDGSAEAAITLLTMGDIVLQSEIITEQGDVGVCVFPDVHSKDKSHVPFSPDNVNHKIVHEYQEVSSPVISMSPASFEENKIVSKEQSTREEEADVMGEIMENTLSTRSTAPAVTKHVGMESHFITAEPSPEKILGVYGLEDHQEVASFCVTKGTEVEIQRESEENDSKALESEDKSLEPAETKEQNQLPCVHDVAVTSLS…
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210362..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256742..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..299982)
location: region:210362-299982:1
so has part: feature:210362-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
so has part: feature:218048-218107:1:exon
so has part: feature:221411-221542:1:exon
so has part: feature:223543-223676:1:exon
so has part: feature:227128-227222:1:exon
so has part: feature:228583-228637:1:exon
so has part: feature:234722-234859:1:exon
so has part: feature:236017-236301:1:exon
so has part: feature:239167-239308:1:exon
so has part: feature:240212-240361:1:exon
so has part: feature:243730-243889:1:exon
so has part: feature:247076-247167:1:exon
so has part: feature:248991-249198:1:exon
so has part: feature:250526-250656:1:exon
so has part: feature:254142-255315:1:exon
so has part: feature:255993-256171:1:exon
so has part: feature:256742-256961:1:exon
so has part: feature:258937-259115:1:exon
so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264804-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
so has part: feature:272554-272785:1:exon
so has part: feature:273325-273485:1:exon
so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-299982:1:exon

XP_013205127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210362-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221411-221542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236017-236301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250526-250656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256742-256961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:264804-265191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:268271-268393:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:299851-299982:1:exon

Bdp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TFIIIB component B'' homolog isoform X5
translation: MFRRARLSVKPNVRPGGGSRGSAAPNPQRVQEAPRPPEPATESAPKPAEPTDVPAPAVASGGAEPQEKAPRSSDAKTGDENNVEESSKPSSTVSQRRKRVPSTSSLAKPTVSVPSQCQPLSAVNHDALQPSPAPAKDKPPCSDRYRIYKARKLREMLKEELRKEKKQWKNKFATNESQRPPDRSKMTMRDFIYYLPDNNPMTSSVEQEKKTEKSLAPTPARDRQDNQSTQDADDNGDVEERADDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNEETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDLDFFAHLLQKVLAEEEKRKKSTKCQSSKEKSSKPRKNVQDTSPEENEGECNEEQTPSFPRCIDDIAESFSPSSETVELRTGSSPSTCNQQDIMPLASESSESSAADLPLSEVAGAASCEVNNAGTEERSVDLENRPLETEQAENVKPKSRSRLQRPKPNLSRAVGKKSVVSQDTQDERSKISPSETSAEKNHVEKERLNVPENFGTENTERENLGAETVSDLSEKSCVQEPKVLRPARLLRGRMQRPRPTIQKATGREETPTPQGKIGAHVEKDEDESCVDREQSESCVVIPEQMENESFKNLLCEDVTSQPEEKDASANVHSDEPSILNECPSIQEDSKANKLKQAPVLRMRFQKPKPNTGRKRMTSKEGVSEQVPISGEITTLEETAKPDSSPRKKMPIVTITVTPATNELESDLKDTGKNDTSFNMKMSEMTEVTMEMEIGLETIEREISPGETGAEMIDIPMETEIGLKASLNEISPMENMSELIDTTEEIYTNLEETGRRETFSQENGPKEVSPISEMETDLQETGKDLPTGDRTTDMIDGTEKGEAYLEDTERREISVPVEETEEPKTMGEMETHLEEFGEKAVGSPAEQLASELDVCSSTHEEEAGVELSAVEEKKLDLKGTGERDVSTTVMVSTEMTATEESSGDLKETGEASISWERGPGEIRVGKHMVADLEETEKVDISPREHEPEEHSSRQLVADVIQSSSNDSSPGVSVDRKNISNKISVMPTFEEQNENSDMEVSSHLSHVKSSQNSADLETVAAIQPADVLEQFSGTSLSRSLPQEPKPLEVKPAPFLRSRFKKPKPNLSRAALKRATPEAEHRVPGKKSEADTVETVALQQDSEQSGSLSSQHEVPFLMTSRENDNPRQEEVDAVILPSMQTGKDSSIPDSCEPKEDSQSTQKQENGLVVPVGTQKMNMVTQETKQSVGHAFPVRGRLQRPRPNVQKARQRQITEKSEAEGVAKNEGSELQKDETKKVLTVANTHIEGEVEAMSLGVSEYTVNESHRHVVPVDEQKRHENEPHVPSPAQLLRRRFQKAKPNLGGAHHRKEQPVVEKGTTDQSTDPKPEDHEPQKGDLDIQLPLKEKTEILTPLEVSAGKDCIVPEASASPTNDAQLTAVPSGGARDEIVEDHPTSSLGLEEQGLSKQISSPQLLKESNCSKTAAHRRTPLSSASECETDHSGKRAHRKMKSNVTKGRGPKRIRGKTAKKEPRASKSMLVTLRASQKEDEEDAEDFDSDFEEETYHLAPEELNKAPVFVPVGLRSPEPVSAQIEETMEELEITMDVADIGCVTVVEHQLSNTDPTTEDVQPEEDLHSPAFEMVIGEQTPEEPGSSDGSAEAAITLLTMGDIVLQSEIITEQGDVGVCVFPDVHSKDKSHVPFSPDNVNHKIVHEYQEVSSPVISMSPASFEENKIVSKEQSTREEEADVMGEIMENTLSTRSTAPAVTKHVGMESHFITAEPSPEKILGVYGLEDHQEVASFCVTKGTEVEIQRESEENDSKALESEDKSLEPAETKEQNQLPCVHDVAVTSLSQEVLPSASFRSEDQEENLEEVHMLGTAVASSAIGIHTLDSGQGLGESPPEEPITENSKGSSMLMLPVPESMPSNILEVQQENMINPQDVTVNLF…
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210362..210579,214146..214422,216787..216896,218048..218107,221411..221542,223543..223676,227128..227222,228583..228637,234722..234859,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..299982)
location: region:210362-299982:1
so has part: feature:210362-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
so has part: feature:218048-218107:1:exon
so has part: feature:221411-221542:1:exon
so has part: feature:223543-223676:1:exon
so has part: feature:227128-227222:1:exon
so has part: feature:228583-228637:1:exon
so has part: feature:234722-234859:1:exon
so has part: feature:239167-239308:1:exon
so has part: feature:240212-240361:1:exon
so has part: feature:243730-243889:1:exon
so has part: feature:247076-247167:1:exon
so has part: feature:248991-249198:1:exon
so has part: feature:250526-250656:1:exon
so has part: feature:254142-255315:1:exon
so has part: feature:255993-256171:1:exon
so has part: feature:256739-256961:1:exon
so has part: feature:258937-259115:1:exon
so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264804-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
so has part: feature:272554-272785:1:exon
so has part: feature:273325-273485:1:exon
so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-299982:1:exon

XP_013205129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210362-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221411-221542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:250526-250656:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:256739-256961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:264804-265191:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:268271-268393:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:299851-299982:1:exon

Bdp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TFIIIB component B'' homolog isoform X4
translation: MFRRARLSVKPNVRPGGGSRGSAAPNPQRVQEAPRPPEPATESAPKPAEPTDVPAPAVASGGAEPQEKAPRSSDAKTGDENNVEESSKPSSTVSQRRKRVPSTSSLAKPTVSVPSQCQPLSAVNHDALQPSPAPAKDKPPCSDRYRIYKARKLREMLKEELRKEKKQWKNKFATNESQRPPDRSKMTMRDFIYYLPDNNPMTSSVEQEKKTEKSLAPTPAREQDNQSTQDADDNGDVEERADDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNEETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDLDFFAHLLQKVLAEEEKRKKSTKCQSSKEKSSKPRKNVQAKKVTSEEVNDDPDESVNSNSSDPERSQKDTQTVAEEEPPTSTGQDLEQTMLEQDQNQEKRRRRKKQNETNKQEATNLVGNVRVQSSSPEAEVHKNTSPEENEGECNEEQTPSFPRCIDDIAESFSPSSETVELRTGSSPSTCNQQDIMPLASESSESSAADLPLSEVAGAASCEVNNAGTEERSVDLENRPLETEQAENVKPKSRSRLQRPKPNLSRAVGKKSVVSQDTQDERSKISPSETSAEKNHVEKERLNVPENFGTENTERENLGAETVSDLSEKSCVQEPKVLRPARLLRGRMQRPRPTIQKATGREETPTPQGKIGAHVEKDEDESCVDREQSESCVVIPEQMENESFKNLLCEDVTSQPEEKDASANVHSDEPSILNECPSIQEDSKANKLKQAPVLRMRFQKPKPNTGRKRMTSKEGVSEQVPISGEITTLEETAKPDSSPRKKMPIVTITVTPATNELESDLKDTGKNDTSFNMKMSEMTEVTMEMEIGLETIEREISPGETGAEMIDIPMETEIGLKASLNEISPMENMSELIDTTEEIYTNLEETGRRETFSQENGPKEVSPISEMETDLQETGKDLPTGDRTTDMIDGTEKGEAYLEDTERREISVPVEETEEPKTMGEMETHLEEFGEKAVGSPAEQLASELDVCSSTHEEEAGVELSAVEEKKLDLKGTGERDVSTTVMVSTEMTATEESSGDLKETGEASISWERGPGEIRVGKHMVADLEETEKVDISPREHEPEEHSSRQLVADVIQSSSNDSSPGVSVDRKNISNKISVMPTFEEQNENSDMEVSSHLSHVKSSQNSADLETVAAIQPADVLEQFSGTSLSRSLPQEPKPLEVKPAPFLRSRFKKPKPNLSRAALKRATPEAEHRVPGKKSEADTVETVALQQDSEQSGSLSSQHEVPFLMTSRENDNPRQEEVDAVILPSMQTGKDSSIPDSCEPKEDSQSTQKQENGLVVPVGTQKMNMVTQETKQSVGHAFPVRGRLQRPRPNVQKARQRQITEKSEAEGVAKNEGSELQKDETKKVLTVANTHIEGEVEAMSLGVSEYTVNESHRHVVPVDEQKRHENEPHVPSPAQLLRRRFQKAKPNLGGAHHRKEQPVVEKGTTDQSTDPKPEDHEPQKGDLDIQLPLKEKTEILTPLEVSAGKDCIVPEASASPTNDAQLTAVPSGGARDEIVEDHPTSSLGLEEQGLSKQISSPQLLKESNCSKTAAHRRTPLSSASECETDHSGKRAHRKMKSNVTKGRGPKRIRGKTAKKEPRASKSMLVTLRASQKEDEEDAEDFDSDFEEETYHLAPEELNKAPVFVPVGLRSPEPVSAQIEETMEELEITMDVADIGCVTVVEHQLSNTDPTTEDVQPEEDLHSPAFEMVIGEQTPEEPGSSDGSAEAAITLLTMGDIVLQSEIITEQGDVGVCVFPDVHSKDKSHVPFSPDNVNHKIVHEYQEVSSPVISMSPASFEENKIVSKEQSTREEEADVMGEIMENTLSTRSTAPAVTKHVGMESHFITAEPSPEKILGVYGLEDHQEVASFCVTKGTEVEIQRESEENDSKALESEDKSLEPAETKEQNQLPCVHDVAVTSLS…
SIO_010081: Bdp1
subclass of: SO_0000673
so part of: Bdp1
location: join(210362..210579,214146..214422,216787..216896,218048..218107,221414..221542,223543..223676,227128..227222,228583..228637,234722..234859,236017..236301,239167..239308,240212..240361,243730..243889,247076..247167,248991..249198,250526..250656,254142..255315,255993..256171,256739..256961,258937..259115,259840..260044,261505..261611,263396..263597,263815..264008,264804..265191,268271..268393,270624..270660,271075..271167,272554..272785,273325..273485,279297..279438,279631..279814,282182..282245,282750..282936,290772..290973,294481..294517,296708..296972,298464..298713,299851..299982)
location: region:210362-299982:1
so has part: feature:210362-210579:1:exon
so has part: feature:214146-214422:1:exon
so has part: feature:216787-216896:1:exon
so has part: feature:218048-218107:1:exon
so has part: feature:221414-221542:1:exon
so has part: feature:223543-223676:1:exon
so has part: feature:227128-227222:1:exon
so has part: feature:228583-228637:1:exon
so has part: feature:234722-234859:1:exon
so has part: feature:236017-236301:1:exon
so has part: feature:239167-239308:1:exon
so has part: feature:240212-240361:1:exon
so has part: feature:243730-243889:1:exon
so has part: feature:247076-247167:1:exon
so has part: feature:248991-249198:1:exon
so has part: feature:250526-250656:1:exon
so has part: feature:254142-255315:1:exon
so has part: feature:255993-256171:1:exon
so has part: feature:256739-256961:1:exon
so has part: feature:258937-259115:1:exon
so has part: feature:259840-260044:1:exon
so has part: feature:261505-261611:1:exon
so has part: feature:263396-263597:1:exon
so has part: feature:263815-264008:1:exon
so has part: feature:264804-265191:1:exon
so has part: feature:268271-268393:1:exon
so has part: feature:270624-270660:1:exon
so has part: feature:271075-271167:1:exon
so has part: feature:272554-272785:1:exon
so has part: feature:273325-273485:1:exon
so has part: feature:279297-279438:1:exon
so has part: feature:279631-279814:1:exon
so has part: feature:282182-282245:1:exon
so has part: feature:282750-282936:1:exon
so has part: feature:290772-290973:1:exon
so has part: feature:294481-294517:1:exon
so has part: feature:296708-296972:1:exon
so has part: feature:298464-298713:1:exon
so has part: feature:299851-299982:1:exon

XP_026639498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210362-210579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214146-214422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216787-216896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218048-218107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221414-221542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223543-223676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227128-227222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228583-228637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234722-234859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236017-236301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239167-239308:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240212-240361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243730-243889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247076-247167:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248991-249198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250526-250656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254142-255315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255993-256171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256739-256961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:258937-259115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:259840-260044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:261505-261611:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263396-263597:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263815-264008:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:264804-265191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:268271-268393:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:270624-270660:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:271075-271167:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:272554-272785:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:273325-273485:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:279297-279438:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:279631-279814:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:282182-282245:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:282750-282936:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:290772-290973:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:294481-294517:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:296708-296972:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:298464-298713:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:299851-299982:1:exon

Mccc2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mccc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 307134..378811
location: region:307134-378811:1
so has part: feature:307134-378811:1:exon
subclass of: SO_0000010

101985999
type: Gene
SIO_000068: ncbigene

position:307134:1
position: 307134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378811:1
position: 378811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307134-378811:1:exon

Mccc2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Mccc2
product: methylcrotonoyl-CoA carboxylase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003377794.1
SIO_010081: Mccc2
so part of: Mccc2
location: join(307134..307389,319922..319988,325225..325309,327737..327838,331355..331482,333272..333384,347176..347289,350785..350849,354638..354737,354837..354932,358657..358729,361847..361923,363181..363247,366994..367150,367500..367614,369351..369436,372837..373219,378103..378811)
location: region:307134-378811:1
so has part: feature:307134-307389:1:exon
so has part: feature:319922-319988:1:exon
so has part: feature:325225-325309:1:exon
so has part: feature:327737-327838:1:exon
so has part: feature:331355-331482:1:exon
so has part: feature:333272-333384:1:exon
so has part: feature:347176-347289:1:exon
so has part: feature:350785-350849:1:exon
so has part: feature:354638-354737:1:exon
so has part: feature:354837-354932:1:exon
so has part: feature:358657-358729:1:exon
so has part: feature:361847-361923:1:exon
so has part: feature:363181-363247:1:exon
so has part: feature:366994-367150:1:exon
so has part: feature:367500-367614:1:exon
so has part: feature:369351-369436:1:exon
so has part: feature:372837-373219:1:exon
so has part: feature:378103-378811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307134-307389:1:exon

position:307389:1
position: 307389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319922-319988:1:exon

position:319922:1
position: 319922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319988:1
position: 319988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325225-325309:1:exon

position:325225:1
position: 325225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325309:1
position: 325309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:327737-327838:1:exon

position:327737:1
position: 327737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327838:1
position: 327838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331355-331482:1:exon

position:331355:1
position: 331355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331482:1
position: 331482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:333272-333384:1:exon

position:333272:1
position: 333272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333384:1
position: 333384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:347176-347289:1:exon

position:347176:1
position: 347176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347289:1
position: 347289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:350785-350849:1:exon

position:350785:1
position: 350785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350849:1
position: 350849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:354638-354737:1:exon

position:354638:1
position: 354638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354737:1
position: 354737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:354837-354932:1:exon

position:354837:1
position: 354837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354932:1
position: 354932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:358657-358729:1:exon

position:358657:1
position: 358657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358729:1
position: 358729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:361847-361923:1:exon

position:361847:1
position: 361847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361923:1
position: 361923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:363181-363247:1:exon

position:363181:1
position: 363181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363247:1
position: 363247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:366994-367150:1:exon

position:366994:1
position: 366994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367150:1
position: 367150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:367500-367614:1:exon

position:367500:1
position: 367500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367614:1
position: 367614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:369351-369436:1:exon

position:369351:1
position: 369351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369436:1
position: 369436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:372837-373219:1:exon

position:372837:1
position: 372837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373219:1
position: 373219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:378103-378811:1:exon

position:378103:1
position: 378103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mccc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mccc2
product: methylcrotonoyl-CoA carboxylase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005356424.2
SIO_010081: Mccc2
subclass of: SO_0000673
so part of: Mccc2
location: join(307134..307389,319922..319988,325225..325309,327737..327838,331355..331482,333272..333384,347176..347289,350785..350849,354638..354737,354837..354932,358657..358729,361847..361923,363181..363247,366994..367150,367500..367614,369351..369436,372837..373309)
location: region:307134-373309:1
so has part: feature:307134-307389:1:exon
so has part: feature:319922-319988:1:exon
so has part: feature:325225-325309:1:exon
so has part: feature:327737-327838:1:exon
so has part: feature:331355-331482:1:exon
so has part: feature:333272-333384:1:exon
so has part: feature:347176-347289:1:exon
so has part: feature:350785-350849:1:exon
so has part: feature:354638-354737:1:exon
so has part: feature:354837-354932:1:exon
so has part: feature:358657-358729:1:exon
so has part: feature:361847-361923:1:exon
so has part: feature:363181-363247:1:exon
so has part: feature:366994-367150:1:exon
so has part: feature:367500-367614:1:exon
so has part: feature:369351-369436:1:exon
so has part: feature:372837-373309:1:exon

position:373309:1
position: 373309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307134-307389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319922-319988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325225-325309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327737-327838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331355-331482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333272-333384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347176-347289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350785-350849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:354638-354737:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:354837-354932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358657-358729:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361847-361923:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:363181-363247:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:366994-367150:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:367500-367614:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369351-369436:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:372837-373309:1:exon

Mccc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mccc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
translation: MWGALRSALRPCARAAVSRSRAYHGDSVARLGTQPDSGSSTYQENYEQMKDLVSQLHERAQYIRLGGSEKARARHTSRGKLLPRDRIDNLIDPGSPFLEFSQFAGYQLYGDEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHLRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIFYNQAVMSSKNITQIAVVMGSCTAGGAYVPAMADENIIVQKQGTIFLGGPPLVKAATGEEVSAEDLGGADLHCRKSGVTDHYALDDHHALHLTRKVVRSLNYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFNEFKALYGDTLVTGFARIFGYPVGIIGNNGVLFSESAKKGAHFVQLCCQRNIPLLFLQNITGFMVGRDYEAEGIAKDGAKMVAAVACAKVPKITVIIGGSYGAGNYGMCGRAYSPRFLYMWPNARISVMGGEQAATVLATVAKDQKAREGKQFSSAEEAALKEPIIKRFEEEGNPYYSSARLWDDGIIDPVDTRLVLGLSISAALNAPIQKTDFGIFRM
SIO_010081: Mccc2
subclass of: SO_0000673
so part of: Mccc2
location: join(307261..307389,319922..319988,325225..325309,327737..327838,331355..331482,333272..333384,347176..347289,350785..350849,354638..354737,354837..354932,358657..358729,361847..361923,363181..363247,366994..367150,367500..367614,369351..369436,372837..372954)
location: region:307261-372954:1
so has part: feature:307261-307389:1:exon
so has part: feature:319922-319988:1:exon
so has part: feature:325225-325309:1:exon
so has part: feature:327737-327838:1:exon
so has part: feature:331355-331482:1:exon
so has part: feature:333272-333384:1:exon
so has part: feature:347176-347289:1:exon
so has part: feature:350785-350849:1:exon
so has part: feature:354638-354737:1:exon
so has part: feature:354837-354932:1:exon
so has part: feature:358657-358729:1:exon
so has part: feature:361847-361923:1:exon
so has part: feature:363181-363247:1:exon
so has part: feature:366994-367150:1:exon
so has part: feature:367500-367614:1:exon
so has part: feature:369351-369436:1:exon
so has part: feature:372837-372954:1:exon

XP_005356481.1
type: Protein
SIO_000068: ncbiprotein

position:307261:1
position: 307261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372954:1
position: 372954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307261-307389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319922-319988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325225-325309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327737-327838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331355-331482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333272-333384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347176-347289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350785-350849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:354638-354737:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:354837-354932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358657-358729:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361847-361923:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:363181-363247:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:366994-367150:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:367500-367614:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369351-369436:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:372837-372954:1:exon

LOC101985720
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101985720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 329170..329532
location: region:329170-329532:1
so has part: feature:329170-329532:1:exon

101985720
type: Gene
SIO_000068: ncbigene

position:329170:1
position: 329170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329532:1
position: 329532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329170-329532:1:exon

LOC101985720
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101985720
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC101985720
subclass of: SO_0000673
so part of: LOC101985720
location: 329170..329532
location: region:329170-329532:1
so has part: feature:329170-329532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329170-329532:1:exon

Cartpt
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cartpt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 420631..422843
location: region:420631-422843:1
so has part: feature:420631-422843:1:exon
subclass of: SO_0000010

101986288
type: Gene
SIO_000068: ncbigene

position:420631:1
position: 420631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422843:1
position: 422843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420631-422843:1:exon

Cartpt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cartpt
product: CART prepropeptide, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005356425.3
SIO_010081: Cartpt
subclass of: SO_0000673
so part of: Cartpt
location: join(420631..421014,421422..421544,422577..422843)
location: region:420631-422843:1
so has part: feature:420631-421014:1:exon
so has part: feature:421422-421544:1:exon
so has part: feature:422577-422843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420631-421014:1:exon

position:421014:1
position: 421014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421422-421544:1:exon

position:421422:1
position: 421422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421544:1
position: 421544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:422577-422843:1:exon

position:422577:1
position: 422577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cartpt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cartpt
product: CART prepropeptide, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005356426.3
SIO_010081: Cartpt
subclass of: SO_0000673
so part of: Cartpt
location: join(420638..421014,421461..421544,422577..422843)
location: region:420638-422843:1
so has part: feature:420638-421014:1:exon
so has part: feature:421461-421544:1:exon
so has part: feature:422577-422843:1:exon

position:420638:1
position: 420638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420638-421014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421461-421544:1:exon

position:421461:1
position: 421461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:422577-422843:1:exon

Cartpt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cartpt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cocaine- and amphetamine-regulated transcript protein isoform X1
translation: MESSRLRLLPLLGAALLLLLPLLGVRAQEDAELQPRALDIYSAVDDASHEKELPRRQLRAPGAVLQIEALQEVLKKLKSKRIPIYEKKYGQVPMCDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL
SIO_010081: Cartpt
subclass of: SO_0000673
so part of: Cartpt
location: join(420856..421014,421422..421544,422577..422684)
location: region:420856-422684:1
so has part: feature:420856-421014:1:exon
so has part: feature:421422-421544:1:exon
so has part: feature:422577-422684:1:exon

XP_005356482.1
type: Protein
SIO_000068: ncbiprotein

position:420856:1
position: 420856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422684:1
position: 422684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420856-421014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421422-421544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422577-422684:1:exon

Cartpt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cartpt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cocaine- and amphetamine-regulated transcript protein isoform X2
translation: MESSRLRLLPLLGAALLLLLPLLGVRAQEDAELQPRALDIYSAVDDASHEKELIEALQEVLKKLKSKRIPIYEKKYGQVPMCDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL
SIO_010081: Cartpt
subclass of: SO_0000673
so part of: Cartpt
location: join(420856..421014,421461..421544,422577..422684)
location: region:420856-422684:1
so has part: feature:420856-421014:1:exon
so has part: feature:421461-421544:1:exon
so has part: feature:422577-422684:1:exon

XP_005356483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420856-421014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421461-421544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422577-422684:1:exon

Map1b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Map1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 799440..896198
location: region:799440-896198:1
so has part: feature:799440-896198:1:exon
subclass of: SO_0000010

101986758
type: Gene
SIO_000068: ncbigene

position:799440:1
position: 799440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896198:1
position: 896198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799440-896198:1:exon

Map1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Map1b
product: microtubule associated protein 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005356427.2
SIO_010081: Map1b
subclass of: SO_0000673
so part of: Map1b
location: join(799440..799714,807625..807726,868578..868660,870963..871103,880140..886626,890050..890288,891757..896198)
location: region:799440-896198:1
so has part: feature:799440-799714:1:exon
so has part: feature:807625-807726:1:exon
so has part: feature:868578-868660:1:exon
so has part: feature:870963-871103:1:exon
so has part: feature:880140-886626:1:exon
so has part: feature:890050-890288:1:exon
so has part: feature:891757-896198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:799440-799714:1:exon

position:799714:1
position: 799714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807625-807726:1:exon

position:807625:1
position: 807625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807726:1
position: 807726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:868578-868660:1:exon

position:868578:1
position: 868578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868660:1
position: 868660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:870963-871103:1:exon

position:870963:1
position: 870963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871103:1
position: 871103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:880140-886626:1:exon

position:880140:1
position: 880140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886626:1
position: 886626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:890050-890288:1:exon

position:890050:1
position: 890050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890288:1
position: 890288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:891757-896198:1:exon

position:891757:1
position: 891757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Map1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Map1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 1B
translation: MATVVVEATEPEPSGSIANPAASTSPSLSHRFLDSKFYLLVVVGETVTEEHLRRAIGNIELGIRSWDTNLIECNLDQELKLFVSRHSARFSPEVPGQKILHHRSDVLETVVLINPSDEAVSTEVRLMITDAARHKLLVLTGQCFENTGELILQSGSFSFQNFIEIFTDQEIGELLSTTHPANKASLTLFCPEEGDWKNSNLDRHNLQDFINIKLNSASILPEMEGLSEFTEYLSESVEVPSPFDILEPPTSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNMLINGGSERKSCFWKLIRHLDRVDSILLTHIGDDNLPGINSMLQRKIAELEEERSQGSTSNSDWMKNLISPDLGVVFLNVPENLKNPEPNIKMKRSIEEACFTLQYLNKLSMKPEPLFRSIGNTIEPVILFQKMGVGKLEMYVLNPVKSSKEMQYFMQQWTGTNKDKAELILPNGQEVDIPISYLTSVSSLIVWHPANPAEKIIRVLFPGNSTQYNILEGLEKLKHLDFLKQPLATQKDLTGQVPTPTVKQVKLKQRADSRENLKPATKPVPSKSVRKESKEEAPEVTKASQVEKTPKVESKEKVIVKKDKPVKPEAKPSVTEKEVPSKEEQSPVKAEVAEKQATESKPKVTKEKVVKKEVKAKPEEKKEEKEKPKKEVAKKEDKTPIKKDEKLKKEEVKKEVKKEIKKEEKKEPKKEVKKETPLKEAKKEVKKEEKKEVKKEEKEPKKEIKKISKDIKKSTPVSETKKPAALKPKVAKKEEPTKKEPAAASKLKDKGKVKVIKKEGKTTEAAATAVGTAATTAAAVAAAGIAASGPAKELEAERSLMSSPEDLTKDFEELKAEEIDLAKDIKPQLELIEDEEKLKETEPVEAYVIQKETEVIKGSAESPDEGITTTEGEGECEQTPEELEPVEKQGVEDIEKFEDEGAGFEESSETGDYEEKAETEEAEEPEEDGDDNVSGSASKHSPTEDDESAKAEADAHIKEKRESVTSGDDRAEEDMDEALEKGEAEQSEEEGEEEDKAEDAREEDYEPEKMEAEDYVMAVVDKAAEAGVAEEQYGFLSTPTKQPGAQSPGREPASSIHDETLPGGSESEATASDEENREDQPEEFTATSGYTQSTIEISSEPTPMDEMSTPRDVMSDETNNEETESPSQEFVNITKYESSLYSQEYSKPVVASFNGLSEGSKTDATDGKDYNASASTISPPSSMEEDKFSKSALRDAYCSEEKDVKASAGLDIKDVSDERLSPTKSPSLSPSPPSPIEKTPLGERSVNFSLTPNEIKVSAEAEVTSVSPGVTQAVVEEHCASPEEKTLEVASPSQSVTGSAGHTPYYQSPTDEKASHLPPEATEKPQAVPVSFEFSEAKDENERASVSPMDEPVPDSASPIEKVLSPLRSPPLIGSESAYEDFLSVDGKAPGRGTESPFEGENGKQDFPGKESPVSDVASTGLYQDKQEEKTTGFIPIKEDFGPEKKTSDVDIMGSQSALALDERKLGGDVSPTQIDVSQFGSFKEDTKMSISEGTVSDKSATPVDEGVAEDTYSHMEGVASVSTASVATSSFPEPTTDDVSPSLHAEVGSPHSTEVDDSLSVSVVQTPTTFQETEMSPSKEECPRPMSISPPDFSPKTAKSRTPVQDHRSEQSSMSIEFGQESPEHSLAMDFSRQSPDHPAAGASMLHITENGPTEVDYSPSDIQDSSLSHKIPPTEEPSYTQDNDLSELISVSQVEASPSTSSAHTPSQIASPLQEDTLSDVVPPRDMALYASLTSEKVQSLEGEKLSPKSDISPLTPRESSPLYSPGFSDSTSAAAENAAGRQTASPPMDAASAEPYGFRASVLFDTMQHHLALDRDLSSVEKDNGGKTPGDFNYAYQKPEETTRSPDEEDYDYESYEKTSRTPDVGGYYYEKTERTVKSPCDSGYSYGTTEKTTKPSEDGGYACEITEKTTRTPEEGGYSYEISEKTTRTPEEGGYTYEKTERSRRFLDDISNGYDDSEDGGHTLGDCS…
SIO_010081: Map1b
subclass of: SO_0000673
so part of: Map1b
location: join(799531..799714,807625..807726,868578..868660,870963..871103,880140..886626,890050..890288,891757..891912)
location: region:799531-891912:1
so has part: feature:799531-799714:1:exon
so has part: feature:807625-807726:1:exon
so has part: feature:868578-868660:1:exon
so has part: feature:870963-871103:1:exon
so has part: feature:880140-886626:1:exon
so has part: feature:890050-890288:1:exon
so has part: feature:891757-891912:1:exon

XP_005356484.1
type: Protein
SIO_000068: ncbiprotein

position:799531:1
position: 799531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891912:1
position: 891912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799531-799714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807625-807726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868578-868660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870963-871103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:880140-886626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890050-890288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891757-891912:1:exon

Mrps27
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mrps27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(903943..988130)
location: region:903943-988130:-1
so has part: feature:903943-988130:-1:exon
subclass of: SO_0000010

101987050
type: Gene
SIO_000068: ncbigene

position:903943:-1
position: 903943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988130:-1
position: 988130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903943-988130:-1:exon

Mrps27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mrps27
product: mitochondrial ribosomal protein S27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005356428.1
SIO_010081: Mrps27
subclass of: SO_0000673
so part of: Mrps27
location: complement(join(903943..904992,907343..907516,909668..909810,911703..911805,917420..917535,919587..919665,922974..923088,971009..971067,972907..972977,982024..982101,988030..988130))
location: region:903943-988130:-1
so has part: feature:988030-988130:-1:exon
so has part: feature:982024-982101:-1:exon
so has part: feature:972907-972977:-1:exon
so has part: feature:971009-971067:-1:exon
so has part: feature:922974-923088:-1:exon
so has part: feature:919587-919665:-1:exon
so has part: feature:917420-917535:-1:exon
so has part: feature:911703-911805:-1:exon
so has part: feature:909668-909810:-1:exon
so has part: feature:907343-907516:-1:exon
so has part: feature:903943-904992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988030-988130:-1:exon

position:988030:-1
position: 988030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982024-982101:-1:exon

position:982024:-1
position: 982024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982101:-1
position: 982101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972907-972977:-1:exon

position:972907:-1
position: 972907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972977:-1
position: 972977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971009-971067:-1:exon

position:971009:-1
position: 971009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971067:-1
position: 971067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:922974-923088:-1:exon

position:922974:-1
position: 922974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923088:-1
position: 923088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:919587-919665:-1:exon

position:919587:-1
position: 919587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919665:-1
position: 919665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:917420-917535:-1:exon

position:917420:-1
position: 917420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917535:-1
position: 917535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:911703-911805:-1:exon

position:911703:-1
position: 911703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911805:-1
position: 911805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:909668-909810:-1:exon

position:909668:-1
position: 909668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909810:-1
position: 909810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:907343-907516:-1:exon

position:907343:-1
position: 907343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907516:-1
position: 907516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:903943-904992:-1:exon

position:904992:-1
position: 904992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mrps27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mrps27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S27, mitochondrial
translation: MAAPMVRCGMLLARRIATARLSLAGKRCLLSAAYVDSHLWEAREKEQCHLADLASLMDKAYERKLPVSSLSISRFVDNISSREDIDSAEYYLYKFRHSPNCWYLRDWTIHTWIRQCLKYGAQDKALYTIVNKVQYGIFPDNFTFNLLMDYFIKKENYKDALSVVFEIMMQEAFEVASTQFLSLYVLYRCLAEKTDLTWEEERNFGASLLLPGLKQKNTVGLSSQLYGYALLGKVELQRGLQAVYHNMPLLWKPGYLDRALQVMEKVASSPEDLKLCREALNVLDGVLKVVTSPADQPQEETQPQEGEGSLGSADVVEQLDIEEPEHSKLPQYLERFKASQSKLQELGRIESEGLLTLTTQLVREKLPACEAEDLATYEQKLREWHLEQMQLIQREQEQRERAKQEYQSLSAAKTAA
SIO_010081: Mrps27
subclass of: SO_0000673
so part of: Mrps27
location: complement(join(904753..904992,907343..907516,909668..909810,911703..911805,917420..917535,919587..919665,922974..923088,971009..971067,972907..972977,982024..982101,988030..988102))
location: region:904753-988102:-1
so has part: feature:988030-988102:-1:exon
so has part: feature:982024-982101:-1:exon
so has part: feature:972907-972977:-1:exon
so has part: feature:971009-971067:-1:exon
so has part: feature:922974-923088:-1:exon
so has part: feature:919587-919665:-1:exon
so has part: feature:917420-917535:-1:exon
so has part: feature:911703-911805:-1:exon
so has part: feature:909668-909810:-1:exon
so has part: feature:907343-907516:-1:exon
so has part: feature:904753-904992:-1:exon

XP_005356485.1
type: Protein
SIO_000068: ncbiprotein

position:904753:-1
position: 904753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988102:-1
position: 988102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988030-988102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982024-982101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972907-972977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971009-971067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922974-923088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919587-919665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917420-917535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911703-911805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909668-909810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:907343-907516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904753-904992:-1:exon

Ptcd2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ptcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 988216..1016839
location: region:988216-1016839:1
so has part: feature:988216-1016839:1:exon
subclass of: SO_0000010

101987332
type: Gene
SIO_000068: ncbigene

position:988216:1
position: 988216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016839:1
position: 1016839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988216-1016839:1:exon

Ptcd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ptcd2
product: pentatricopeptide repeat domain 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005356429.2
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988216..988358,989609..989701,993204..993333,997902..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1012416..1012529,1016078..1016839)
location: region:988216-1016839:1
so has part: feature:988216-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:997902-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1012416-1012529:1:exon
so has part: feature:1016078-1016839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988216-988358:1:exon

position:988358:1
position: 988358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

position:989609:1
position: 989609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989701:1
position: 989701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

position:993204:1
position: 993204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993333:1
position: 993333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:997902-998019:1:exon

position:997902:1
position: 997902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998019:1
position: 998019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1001957-1002035:1:exon

position:1001957:1
position: 1001957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002035:1
position: 1002035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1002409-1002500:1:exon

position:1002409:1
position: 1002409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002500:1
position: 1002500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1005087-1005200:1:exon

position:1005087:1
position: 1005087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005200:1
position: 1005200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1006393-1006467:1:exon

position:1006393:1
position: 1006393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006467:1
position: 1006467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1012416-1012529:1:exon

position:1012416:1
position: 1012416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012529:1
position: 1012529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1016078-1016839:1:exon

position:1016078:1
position: 1016078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ptcd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ptcd2
product: pentatricopeptide repeat domain 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783821.1
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988218..988358,989609..989701,993204..993333,995507..995511,997880..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1012416..1012529,1016078..1016839)
location: region:988218-1016839:1
so has part: feature:988218-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:995507-995511:1:exon
so has part: feature:997880-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1012416-1012529:1:exon
so has part: feature:1016078-1016839:1:exon

position:988218:1
position: 988218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988218-988358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995507-995511:1:exon

position:995507:1
position: 995507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995511:1
position: 995511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:997880-998019:1:exon

position:997880:1
position: 997880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1001957-1002035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1002409-1002500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005087-1005200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006393-1006467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012416-1012529:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1016078-1016839:1:exon

Ptcd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ptcd2
product: pentatricopeptide repeat domain 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026783822.1
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988218..988358,989609..989701,993204..993333,995507..995511,997880..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1016078..1016839)
location: region:988218-1016839:1
so has part: feature:988218-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:995507-995511:1:exon
so has part: feature:997880-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1016078-1016839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988218-988358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995507-995511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997880-998019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1001957-1002035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1002409-1002500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005087-1005200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006393-1006467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1016078-1016839:1:exon

Ptcd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ptcd2
product: pentatricopeptide repeat domain 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783823.1
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988218..988358,989609..989701,993204..993333,995507..995511,997880..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1012416..1012529,1012754..1013037)
location: region:988218-1013037:1
so has part: feature:988218-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:995507-995511:1:exon
so has part: feature:997880-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1012416-1012529:1:exon
so has part: feature:1012754-1013037:1:exon

position:1013037:1
position: 1013037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988218-988358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995507-995511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997880-998019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1001957-1002035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1002409-1002500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005087-1005200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006393-1006467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012416-1012529:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012754-1013037:1:exon

position:1012754:1
position: 1012754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ptcd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ptcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein 2, mitochondrial isoform X1
translation: MATVFRPLERLRAPRPSLHPGVTGSGSACGRCTLGAKRYLLTDSIVKLKEFQQKKVAIAYNLPSTKAIYFRNLEEKLTQNKLILKEELKTVLHLCQSREDVELVKSIIYRFDRIILITRYHAENRNFTVGEYKFGPVFMRLCYELDLEDSAVELIKDKHLRGFFLDSTSFNILIDMLFTKGKYESALEVLIEMKNQDVKFSRDTYILAFAVCYKLNSPESFKICTTLREEALLKGDVISRRASCFAVALALNQNQVEKAMSIFSQIMNPESITCANLNILIHVRSNRLANLIKILQDTVDRSVSMFVKRHAFSEEVLAKVRDKLKDSPTLAARFDEVYGKLHVNGLVTVYTLDALLCHVPRDKKSNTVLLKKRTVSQRTLQPLSQSLLTE
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988253..988358,989609..989701,993204..993333,995507..995511,997880..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1012416..1012529,1016078..1016302)
location: region:988253-1016302:1
so has part: feature:988253-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:995507-995511:1:exon
so has part: feature:997880-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1012416-1012529:1:exon
so has part: feature:1016078-1016302:1:exon

XP_026639622.1
type: Protein
SIO_000068: ncbiprotein

position:988253:1
position: 988253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016302:1
position: 1016302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988253-988358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995507-995511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997880-998019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1001957-1002035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1002409-1002500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005087-1005200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006393-1006467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012416-1012529:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1016078-1016302:1:exon

Ptcd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ptcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein 2, mitochondrial isoform X3
translation: MATVFRPLERLRAPRPSLHPGVTGSGSACGRCTLGAKRYLLTDSIVKLKEFQQKKVAIAYNLPSTKAIYFRNLEEKLTQNKLILKEELKTVLHLCQSREDVELVKSIIYRFDRIILITRYHAENRNFTVGEYKFGPVFMRLCYELDLEDSAVELIKDKHLRGFFLDSTSFNILIDMLFTKGKYESALEVLIEMKNQDVKFSRDTYILAFAVCYKLNSPESFKICTTLREEALLKGDVISRRASCFAVALALNQNQVEKAMSIFSQIMNPESITCANLNLAKVRDKLKDSPTLAARFDEVYGKLHVNGLVTVYTLDALLCHVPRDKKSNTVLLKKRTVSQRTLQPLSQSLLTE
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988253..988358,989609..989701,993204..993333,995507..995511,997880..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1016078..1016302)
location: region:988253-1016302:1
so has part: feature:988253-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:995507-995511:1:exon
so has part: feature:997880-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1016078-1016302:1:exon

XP_026639623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:988253-988358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995507-995511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997880-998019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1001957-1002035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1002409-1002500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005087-1005200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006393-1006467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1016078-1016302:1:exon

Ptcd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ptcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein 2, mitochondrial isoform X2
translation: MATVFRPLERLRAPRPSLHPGVTGSGSACGRCTLGAKRYLLTDSIVKLKEFQQKKVAIAYNLPSTKAIYFRNLEEKLTQNKLILKEELKTVLHLCQSREDVELVKSIIYRYHAENRNFTVGEYKFGPVFMRLCYELDLEDSAVELIKDKHLRGFFLDSTSFNILIDMLFTKGKYESALEVLIEMKNQDVKFSRDTYILAFAVCYKLNSPESFKICTTLREEALLKGDVISRRASCFAVALALNQNQVEKAMSIFSQIMNPESITCANLNILIHVRSNRLANLIKILQDTVDRSVSMFVKRHAFSEEVLAKVRDKLKDSPTLAARFDEVYGKLHVNGLVTVYTLDALLCHVPRDKKSNTVLLKKRTVSQRTLQPLSQSLLTE
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988253..988358,989609..989701,993204..993333,997902..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1012416..1012529,1016078..1016302)
location: region:988253-1016302:1
so has part: feature:988253-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:997902-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1012416-1012529:1:exon
so has part: feature:1016078-1016302:1:exon

XP_005356486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:988253-988358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997902-998019:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1001957-1002035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002409-1002500:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005087-1005200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006393-1006467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1012416-1012529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1016078-1016302:1:exon

Ptcd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ptcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein 2, mitochondrial isoform X4
translation: MATVFRPLERLRAPRPSLHPGVTGSGSACGRCTLGAKRYLLTDSIVKLKEFQQKKVAIAYNLPSTKAIYFRNLEEKLTQNKLILKEELKTVLHLCQSREDVELVKSIIYRFDRIILITRYHAENRNFTVGEYKFGPVFMRLCYELDLEDSAVELIKDKHLRGFFLDSTSFNILIDMLFTKGKYESALEVLIEMKNQDVKFSRDTYILAFAVCYKLNSPESFKICTTLREEALLKGDVISRRASCFAVALALNQNQVEKAMSIFSQIMNPESITCANLNILIHVRSNRLANLIKILQDTVDRSVSMFVKRHAFSEEVPPIA
SIO_010081: Ptcd2
subclass of: SO_0000673
so part of: Ptcd2
location: join(988253..988358,989609..989701,993204..993333,995507..995511,997880..998019,1001957..1002035,1002409..1002500,1005087..1005200,1006393..1006467,1012416..1012529,1012754..1012768)
location: region:988253-1012768:1
so has part: feature:988253-988358:1:exon
so has part: feature:989609-989701:1:exon
so has part: feature:993204-993333:1:exon
so has part: feature:995507-995511:1:exon
so has part: feature:997880-998019:1:exon
so has part: feature:1001957-1002035:1:exon
so has part: feature:1002409-1002500:1:exon
so has part: feature:1005087-1005200:1:exon
so has part: feature:1006393-1006467:1:exon
so has part: feature:1012416-1012529:1:exon
so has part: feature:1012754-1012768:1:exon

XP_026639624.1
type: Protein
SIO_000068: ncbiprotein

position:1012768:1
position: 1012768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988253-988358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989609-989701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993204-993333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995507-995511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997880-998019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1001957-1002035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1002409-1002500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005087-1005200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006393-1006467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012416-1012529:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012754-1012768:1:exon

Znf366
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Znf366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1094232..1156790)
location: region:1094232-1156790:-1
so has part: feature:1094232-1156790:-1:exon
subclass of: SO_0000010

101987612
type: Gene
SIO_000068: ncbigene

position:1094232:-1
position: 1094232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156790:-1
position: 1156790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094232-1156790:-1:exon

Znf366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Znf366
product: zinc finger protein 366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005356430.3
SIO_010081: Znf366
subclass of: SO_0000673
so part of: Znf366
location: complement(join(1094232..1095822,1098536..1098710,1108245..1108436,1111775..1113111,1156666..1156790))
location: region:1094232-1156790:-1
so has part: feature:1156666-1156790:-1:exon
so has part: feature:1111775-1113111:-1:exon
so has part: feature:1108245-1108436:-1:exon
so has part: feature:1098536-1098710:-1:exon
so has part: feature:1094232-1095822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156666-1156790:-1:exon

position:1156666:-1
position: 1156666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1111775-1113111:-1:exon

position:1111775:-1
position: 1111775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113111:-1
position: 1113111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108245-1108436:-1:exon

position:1108245:-1
position: 1108245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108436:-1
position: 1108436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1098536-1098710:-1:exon

position:1098536:-1
position: 1098536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098710:-1
position: 1098710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1094232-1095822:-1:exon

position:1095822:-1
position: 1095822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Znf366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Znf366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 366
translation: MQKAMKMVKDEDGPFNAAAKNVPSFPHCLQPEAPRGKVPQRHLFPEVLRGPFSQFRYEPPPGDLDGFPEVFEGGGSRKRKSMPTKMPYNHPAEEAAIAEESKSLGSPNLPLLFPQPQRPKCDSQMIDLCNVGLQFYRTLEHAGGKPVKQEPVKPSAVWPQPTPPAFLPPPFPYYPKVHPGLMFPFFMPSSSPFPFSRHAFLPKQPPEPALPRKVEPLESEETKQKVERVDVNVQIDDSYYVDVGGAQKRWQCPTCDKSYTSKYNLVTHILGHSGIKPHACTRCGKLFKQLSHLHTHMLTHQGTRPHKCQVCHKAFTQTSHLKRHMMQHSEVKPHNCRVCSRGFAYPSELKAHEAKHASGRENICVECGLDFPTLAQLKRHLTTHRGPIQYNCSECDKTFQYPSQLQNHMMKHKDIRPYICSECGMEFVQPHHLKQHSLTHKGVKEHKCGICGREFTLLANMKRHVLIHTNIRAYQCHLCYKSFVQKQTLKAHMIVHSDVKPFKCKLCGKEFNRMHNLMGHMHLHSDSKPFKCLYCPSKFTLKGNLTRHMKVKHGVMERGLHAQGLGRGRLVLAQSSAVLRNLEQEEPFDLSQKRNAKGPVFQSDVDSTRSYLCQEEEEEEDGDESNSYEVESYSPSLAQESQQPCAPEDLSTKQEQSFRVPGEGRRDQDALEEQREESGEDNEGRDIDCAITDEPLGSRLLQSGGQGPPFSNYLYFKHRDEGLKELLERKMEKQAVLLGV
SIO_010081: Znf366
subclass of: SO_0000673
so part of: Znf366
location: complement(join(1095290..1095822,1098536..1098710,1108245..1108436,1111775..1113097))
location: region:1095290-1113097:-1
so has part: feature:1111775-1113097:-1:exon
so has part: feature:1108245-1108436:-1:exon
so has part: feature:1098536-1098710:-1:exon
so has part: feature:1095290-1095822:-1:exon

XP_005356487.1
type: Protein
SIO_000068: ncbiprotein

position:1095290:-1
position: 1095290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113097:-1
position: 1113097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111775-1113097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1108245-1108436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1098536-1098710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1095290-1095822:-1:exon

LOC101980358
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1355127..1355606
location: region:1355127-1355606:1
so has part: feature:1355127-1355606:1:exon
subclass of: SO_0000010

101980358
type: Gene
SIO_000068: ncbigene

position:1355127:1
position: 1355127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355606:1
position: 1355606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355127-1355606:1:exon

LOC101980358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101980358
product: histone H2B subacrosomal variant-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356565.2
SIO_010081: LOC101980358
subclass of: SO_0000673
so part of: LOC101980358
location: 1355127..1355606
location: region:1355127-1355606:1
so has part: feature:1355127-1355606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1355127-1355606:1:exon

LOC101980358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101980358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B subacrosomal variant-like
translation: MAKSIIQRYQHIKRHLRPVSRKQSCNSSIDFGHGNYSRYICRVLKEVVPMKGMSSHTVDILNFLINDIFKRIATEAGQLMYLRKRCTLTPEDIQKAVYQLLPKKLAMFAVTFGNRAVHRFVHS
SIO_010081: LOC101980358
subclass of: SO_0000673
so part of: LOC101980358
location: 1355235..1355606
location: region:1355235-1355606:1
so has part: feature:1355235-1355606:1:exon

XP_005356622.1
type: Protein
SIO_000068: ncbiprotein

position:1355235:1
position: 1355235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355235-1355606:1:exon

LOC101987888
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101987888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1412945..1413688
location: region:1412945-1413688:1
so has part: feature:1412945-1413688:1:exon

101987888
type: Gene
SIO_000068: ncbigene

position:1412945:1
position: 1412945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413688:1
position: 1413688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412945-1413688:1:exon

LOC101987888
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101987888
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101987888
subclass of: SO_0000673
so part of: LOC101987888
location: 1412945..1413688
location: region:1412945-1413688:1
so has part: feature:1412945-1413688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1412945-1413688:1:exon

Tnpo1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tnpo1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1427333..1510362
location: region:1427333-1510362:1
so has part: feature:1427333-1510362:1:exon
subclass of: SO_0000010

101988149
type: Gene
SIO_000068: ncbigene

position:1427333:1
position: 1427333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510362:1
position: 1510362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427333-1510362:1:exon

Tnpo1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnpo1
product: transportin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_013349661.2
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1427333..1427577,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1499620..1499707)
location: region:1427333-1499707:1
so has part: feature:1427333-1427577:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1499620-1499707:1:exon

position:1499707:1
position: 1499707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427333-1427577:1:exon

position:1427577:1
position: 1427577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

position:1456786:1
position: 1456786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456899:1
position: 1456899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

position:1459073:1
position: 1459073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459148:1
position: 1459148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

position:1462448:1
position: 1462448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462597:1
position: 1462597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

position:1467176:1
position: 1467176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467282:1
position: 1467282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

position:1469663:1
position: 1469663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469796:1
position: 1469796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

position:1480476:1
position: 1480476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480557:1
position: 1480557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

position:1482149:1
position: 1482149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482271:1
position: 1482271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

position:1483988:1
position: 1483988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484106:1
position: 1484106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

position:1484571:1
position: 1484571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484631:1
position: 1484631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

position:1485173:1
position: 1485173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1485341:1
position: 1485341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

position:1486883:1
position: 1486883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487035:1
position: 1487035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

position:1488153:1
position: 1488153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488378:1
position: 1488378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

position:1489727:1
position: 1489727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1489898:1
position: 1489898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

position:1491263:1
position: 1491263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1491349:1
position: 1491349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

position:1492724:1
position: 1492724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492831:1
position: 1492831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

position:1492939:1
position: 1492939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493097:1
position: 1493097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

position:1493176:1
position: 1493176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493263:1
position: 1493263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

position:1495597:1
position: 1495597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1495695:1
position: 1495695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

position:1495885:1
position: 1495885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1495980:1
position: 1495980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1499620-1499707:1:exon

position:1499620:1
position: 1499620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tnpo1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnpo1
product: transportin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005356431.3
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1427337..1427577,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502355,1504677..1510362)
location: region:1427337-1510362:1
so has part: feature:1427337-1427577:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502355:1:exon
so has part: feature:1504677-1510362:1:exon

position:1427337:1
position: 1427337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427337-1427577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1498687-1498762:1:exon

position:1498687:1
position: 1498687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498762:1
position: 1498762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1499620-1499719:1:exon

position:1499719:1
position: 1499719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1501343-1501417:1:exon

position:1501343:1
position: 1501343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501417:1
position: 1501417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1502214-1502355:1:exon

position:1502214:1
position: 1502214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502355:1
position: 1502355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1504677-1510362:1:exon

position:1504677:1
position: 1504677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tnpo1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnpo1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-1 isoform X1
translation: MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1427563..1427577,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502321)
location: region:1427563-1502321:1
so has part: feature:1427563-1427577:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502321:1:exon

XP_005356488.1
type: Protein
SIO_000068: ncbiprotein

position:1427563:1
position: 1427563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502321:1
position: 1502321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427563-1427577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1498687-1498762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1499620-1499719:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1501343-1501417:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1502214-1502321:1:exon

Tnpo1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnpo1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-1 isoform X4
translation: MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTGVPL
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1427563..1427577,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1499620..1499633)
location: region:1427563-1499633:1
so has part: feature:1427563-1427577:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1499620-1499633:1:exon

XP_013205115.1
type: Protein
SIO_000068: ncbiprotein

position:1499633:1
position: 1499633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427563-1427577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1499620-1499633:1:exon

Tnpo1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnpo1
product: transportin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026783690.1
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1427784..1427802,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502355,1504677..1510362)
location: region:1427784-1510362:1
so has part: feature:1427784-1427802:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502355:1:exon
so has part: feature:1504677-1510362:1:exon

position:1427784:1
position: 1427784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427784-1427802:1:exon

position:1427802:1
position: 1427802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1498687-1498762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1499620-1499719:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1501343-1501417:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1502214-1502355:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1504677-1510362:1:exon

Tnpo1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnpo1
product: transportin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026783689.1
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1428311..1428330,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502355,1504677..1510362)
location: region:1428311-1510362:1
so has part: feature:1428311-1428330:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502355:1:exon
so has part: feature:1504677-1510362:1:exon

position:1428311:1
position: 1428311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428311-1428330:1:exon

position:1428330:1
position: 1428330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1498687-1498762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1499620-1499719:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1501343-1501417:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1502214-1502355:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1504677-1510362:1:exon

Tnpo1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnpo1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-1 isoform X2
translation: MASQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1428322..1428330,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502321)
location: region:1428322-1502321:1
so has part: feature:1428322-1428330:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502321:1:exon

XP_026639490.1
type: Protein
SIO_000068: ncbiprotein

position:1428322:1
position: 1428322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428322-1428330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1498687-1498762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1499620-1499719:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1501343-1501417:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1502214-1502321:1:exon

Tnpo1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnpo1
product: transportin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005356432.2
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1456596..1456666,1456786..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502355,1504677..1510362)
location: region:1456596-1510362:1
so has part: feature:1456596-1456666:1:exon
so has part: feature:1456786-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502355:1:exon
so has part: feature:1504677-1510362:1:exon

position:1456596:1
position: 1456596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456596-1456666:1:exon

position:1456666:1
position: 1456666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1456786-1456899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1498687-1498762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1499620-1499719:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1501343-1501417:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1502214-1502355:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1504677-1510362:1:exon

Tnpo1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnpo1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-1 isoform X3
translation: MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1456795..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502321)
location: region:1456795-1502321:1
so has part: feature:1456795-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502321:1:exon

XP_026639491.1
type: Protein
SIO_000068: ncbiprotein

position:1456795:1
position: 1456795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456795-1456899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1498687-1498762:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1499620-1499719:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1501343-1501417:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1502214-1502321:1:exon

Tnpo1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnpo1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-1 isoform X3
translation: MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
SIO_010081: Tnpo1
subclass of: SO_0000673
so part of: Tnpo1
location: join(1456795..1456899,1459073..1459148,1462448..1462597,1467176..1467282,1469663..1469796,1480476..1480557,1482149..1482271,1483988..1484106,1484571..1484631,1485173..1485341,1486883..1487035,1488153..1488378,1489727..1489898,1491263..1491349,1492724..1492831,1492939..1493097,1493176..1493263,1495597..1495695,1495885..1495980,1498687..1498762,1499620..1499719,1501343..1501417,1502214..1502321)
location: region:1456795-1502321:1
so has part: feature:1456795-1456899:1:exon
so has part: feature:1459073-1459148:1:exon
so has part: feature:1462448-1462597:1:exon
so has part: feature:1467176-1467282:1:exon
so has part: feature:1469663-1469796:1:exon
so has part: feature:1480476-1480557:1:exon
so has part: feature:1482149-1482271:1:exon
so has part: feature:1483988-1484106:1:exon
so has part: feature:1484571-1484631:1:exon
so has part: feature:1485173-1485341:1:exon
so has part: feature:1486883-1487035:1:exon
so has part: feature:1488153-1488378:1:exon
so has part: feature:1489727-1489898:1:exon
so has part: feature:1491263-1491349:1:exon
so has part: feature:1492724-1492831:1:exon
so has part: feature:1492939-1493097:1:exon
so has part: feature:1493176-1493263:1:exon
so has part: feature:1495597-1495695:1:exon
so has part: feature:1495885-1495980:1:exon
so has part: feature:1498687-1498762:1:exon
so has part: feature:1499620-1499719:1:exon
so has part: feature:1501343-1501417:1:exon
so has part: feature:1502214-1502321:1:exon

XP_005356489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1456795-1456899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1459073-1459148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1462448-1462597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1467176-1467282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1469663-1469796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480476-1480557:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1482149-1482271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1483988-1484106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1484571-1484631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1485173-1485341:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486883-1487035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1488153-1488378:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1489727-1489898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1491263-1491349:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1492724-1492831:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1492939-1493097:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1493176-1493263:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1495597-1495695:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1495885-1495980:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1498687-1498762:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1499620-1499719:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1501343-1501417:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1502214-1502321:1:exon

Fcho2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fcho2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1540398..1650162
location: region:1540398-1650162:1
so has part: feature:1540398-1650162:1:exon
subclass of: SO_0000010

101988645
type: Gene
SIO_000068: ncbigene

position:1540398:1
position: 1540398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650162:1
position: 1650162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540398-1650162:1:exon

Fcho2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fcho2
product: FCH domain only 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005356433.3
SIO_010081: Fcho2
subclass of: SO_0000673
so part of: Fcho2
location: join(1540398..1540552,1553814..1553905,1560961..1561035,1564006..1564147,1564233..1564385,1566925..1567029,1581000..1581098,1582713..1582809,1595322..1595366,1596194..1596266,1596925..1596949,1605792..1605849,1606119..1606294,1610086..1610097,1610480..1610504,1611996..1612038,1613717..1613805,1615911..1616014,1620670..1620799,1636793..1636904,1640418..1640573,1640887..1641019,1643178..1643377,1644028..1644092,1647433..1647597,1647876..1650162)
location: region:1540398-1650162:1
so has part: feature:1540398-1540552:1:exon
so has part: feature:1553814-1553905:1:exon
so has part: feature:1560961-1561035:1:exon
so has part: feature:1564006-1564147:1:exon
so has part: feature:1564233-1564385:1:exon
so has part: feature:1566925-1567029:1:exon
so has part: feature:1581000-1581098:1:exon
so has part: feature:1582713-1582809:1:exon
so has part: feature:1595322-1595366:1:exon
so has part: feature:1596194-1596266:1:exon
so has part: feature:1596925-1596949:1:exon
so has part: feature:1605792-1605849:1:exon
so has part: feature:1606119-1606294:1:exon
so has part: feature:1610086-1610097:1:exon
so has part: feature:1610480-1610504:1:exon
so has part: feature:1611996-1612038:1:exon
so has part: feature:1613717-1613805:1:exon
so has part: feature:1615911-1616014:1:exon
so has part: feature:1620670-1620799:1:exon
so has part: feature:1636793-1636904:1:exon
so has part: feature:1640418-1640573:1:exon
so has part: feature:1640887-1641019:1:exon
so has part: feature:1643178-1643377:1:exon
so has part: feature:1644028-1644092:1:exon
so has part: feature:1647433-1647597:1:exon
so has part: feature:1647876-1650162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1540398-1540552:1:exon

position:1540552:1
position: 1540552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1553814-1553905:1:exon

position:1553814:1
position: 1553814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553905:1
position: 1553905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1560961-1561035:1:exon

position:1560961:1
position: 1560961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561035:1
position: 1561035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1564006-1564147:1:exon

position:1564006:1
position: 1564006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564147:1
position: 1564147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1564233-1564385:1:exon

position:1564233:1
position: 1564233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564385:1
position: 1564385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1566925-1567029:1:exon

position:1566925:1
position: 1566925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567029:1
position: 1567029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1581000-1581098:1:exon

position:1581000:1
position: 1581000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581098:1
position: 1581098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1582713-1582809:1:exon

position:1582713:1
position: 1582713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582809:1
position: 1582809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1595322-1595366:1:exon

position:1595322:1
position: 1595322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595366:1
position: 1595366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1596194-1596266:1:exon

position:1596194:1
position: 1596194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596266:1
position: 1596266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1596925-1596949:1:exon

position:1596925:1
position: 1596925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596949:1
position: 1596949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1605792-1605849:1:exon

position:1605792:1
position: 1605792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605849:1
position: 1605849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1606119-1606294:1:exon

position:1606119:1
position: 1606119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606294:1
position: 1606294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1610086-1610097:1:exon

position:1610086:1
position: 1610086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610097:1
position: 1610097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1610480-1610504:1:exon

position:1610480:1
position: 1610480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610504:1
position: 1610504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1611996-1612038:1:exon

position:1611996:1
position: 1611996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612038:1
position: 1612038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1613717-1613805:1:exon

position:1613717:1
position: 1613717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613805:1
position: 1613805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1615911-1616014:1:exon

position:1615911:1
position: 1615911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616014:1
position: 1616014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1620670-1620799:1:exon

position:1620670:1
position: 1620670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620799:1
position: 1620799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1636793-1636904:1:exon

position:1636793:1
position: 1636793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636904:1
position: 1636904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1640418-1640573:1:exon

position:1640418:1
position: 1640418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640573:1
position: 1640573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1640887-1641019:1:exon

position:1640887:1
position: 1640887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641019:1
position: 1641019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1643178-1643377:1:exon

position:1643178:1
position: 1643178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643377:1
position: 1643377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1644028-1644092:1:exon

position:1644028:1
position: 1644028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644092:1
position: 1644092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1647433-1647597:1:exon

position:1647433:1
position: 1647433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647597:1
position: 1647597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1647876-1650162:1:exon

position:1647876:1
position: 1647876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fcho2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fcho2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR domain only protein 2
translation: MVMAHFVENFWGEKNNGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQAIQNITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALTKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTIESLIQKFAESKGTGKERPGLIEFEECDPASAVEGIKPRKRKTFALPGIIKKEKDAESVECPDADSLNIPDVDEEGYSIKPETNQNDTKENHFYSSSDSDSEDEEPKRYRIEIKPVHPNNLHHTMASLDELKVSIGNITLSPAVSRHSPVQMNRNSSNEELTKSKPSSLPNEKGASDFLAWDPLFASPLDSTSSASLASSSARPTTPLSIGTIVPPPRPASRPKLTSGKLSGINEIPRPFSPPVTSNTSPPPIAPLARAESSSSISSSASLSAANTPTVGVSRGPSPVSLGNQDTLPVAIALTESVNAYFKGADPTKCIVKITGDVTISFPSGIIKVFTSNPSPAVLCFRVKNISRLEQILPNSQLVFSDPSQCDSNTKDFWMNMQAVTVYLKKLSEQNPAASYYNVDVLKYQVSSNGIQSTPLNLATYWKCSASTTDLRVDYKYNPEAMVAPSVLSNIQVVVPVDGGVTNMQSLPPAIWNAEQMKACWKLSGISEKSDSGGSGSLRAKFDLSEGPSKPTTLAVQFLSEGNTLSGVDIELVGTGYRLSLVKKRFATGRYLADC
SIO_010081: Fcho2
subclass of: SO_0000673
so part of: Fcho2
location: join(1540520..1540552,1553814..1553905,1560961..1561035,1564006..1564147,1564233..1564385,1566925..1567029,1581000..1581098,1582713..1582809,1595322..1595366,1596194..1596266,1596925..1596949,1605792..1605849,1606119..1606294,1610086..1610097,1610480..1610504,1611996..1612038,1613717..1613805,1615911..1616014,1620670..1620799,1636793..1636904,1640418..1640573,1640887..1641019,1643178..1643377,1644028..1644092,1647433..1647597,1647876..1647898)
location: region:1540520-1647898:1
so has part: feature:1540520-1540552:1:exon
so has part: feature:1553814-1553905:1:exon
so has part: feature:1560961-1561035:1:exon
so has part: feature:1564006-1564147:1:exon
so has part: feature:1564233-1564385:1:exon
so has part: feature:1566925-1567029:1:exon
so has part: feature:1581000-1581098:1:exon
so has part: feature:1582713-1582809:1:exon
so has part: feature:1595322-1595366:1:exon
so has part: feature:1596194-1596266:1:exon
so has part: feature:1596925-1596949:1:exon
so has part: feature:1605792-1605849:1:exon
so has part: feature:1606119-1606294:1:exon
so has part: feature:1610086-1610097:1:exon
so has part: feature:1610480-1610504:1:exon
so has part: feature:1611996-1612038:1:exon
so has part: feature:1613717-1613805:1:exon
so has part: feature:1615911-1616014:1:exon
so has part: feature:1620670-1620799:1:exon
so has part: feature:1636793-1636904:1:exon
so has part: feature:1640418-1640573:1:exon
so has part: feature:1640887-1641019:1:exon
so has part: feature:1643178-1643377:1:exon
so has part: feature:1644028-1644092:1:exon
so has part: feature:1647433-1647597:1:exon
so has part: feature:1647876-1647898:1:exon

XP_005356490.1
type: Protein
SIO_000068: ncbiprotein

position:1540520:1
position: 1540520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647898:1
position: 1647898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540520-1540552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553814-1553905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1560961-1561035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1564006-1564147:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1564233-1564385:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1566925-1567029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1581000-1581098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1582713-1582809:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1595322-1595366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1596194-1596266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1596925-1596949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1605792-1605849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1606119-1606294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1610086-1610097:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1610480-1610504:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1611996-1612038:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1613717-1613805:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1615911-1616014:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1620670-1620799:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1636793-1636904:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1640418-1640573:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1640887-1641019:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1643178-1643377:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1644028-1644092:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1647433-1647597:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1647876-1647898:1:exon

Tmem171
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmem171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1686632..1692807
location: region:1686632-1692807:1
so has part: feature:1686632-1692807:1:exon
subclass of: SO_0000010

101988922
type: Gene
SIO_000068: ncbigene

position:1686632:1
position: 1686632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692807:1
position: 1692807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1686632-1692807:1:exon

Tmem171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmem171
product: transmembrane protein 171, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_005356435.1
SIO_010081: Tmem171
subclass of: SO_0000673
so part of: Tmem171
location: join(1686632..1687271,1690617..1690752,1692609..1692807)
location: region:1686632-1692807:1
so has part: feature:1686632-1687271:1:exon
so has part: feature:1690617-1690752:1:exon
so has part: feature:1692609-1692807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1686632-1687271:1:exon

position:1687271:1
position: 1687271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690617-1690752:1:exon

position:1690617:1
position: 1690617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690752:1
position: 1690752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1692609-1692807:1:exon

position:1692609:1
position: 1692609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmem171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmem171
product: transmembrane protein 171, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_005356434.2
SIO_010081: Tmem171
subclass of: SO_0000673
so part of: Tmem171
location: join(1686632..1687271,1690617..1690752,1692612..1692807)
location: region:1686632-1692807:1
so has part: feature:1686632-1687271:1:exon
so has part: feature:1690617-1690752:1:exon
so has part: feature:1692612-1692807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1686632-1687271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690617-1690752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1692612-1692807:1:exon

position:1692612:1
position: 1692612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmem171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmem171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 171 isoform X1
translation: MSSVGTTEPDRDQRDTHVSKLIFFLFILGAVLLCVGVLLSIFGYQACQYNRPLSHCSMVLKIAGPSCAVVGLGIVILARSRARLHLREEQRRGHQDPDQSFVCGESRQFAQCLIFGFLFLTSGMLISVLGIWVPGCGSELGPESMNETDIGEPEPQICSFLSLQIMGPLIVLVGLCFFVVAHVKKKNNLSSSRDTSDMEGGHAHSMEPVHITVGDSVIIFPPPPPPYFPESSAGTRPPGPNSLHHNENPPSYSSLFNYGRSPTPEIQGAASERERELIYTISGPGSPSESSHPGHLPLDLPPIYEEKETALATPSDAPSEPSPP
SIO_010081: Tmem171
subclass of: SO_0000673
so part of: Tmem171
location: join(1686632..1687271,1690617..1690752,1692609..1692807)
location: region:1686632-1692807:1
so has part: feature:1686632-1687271:1:exon
so has part: feature:1690617-1690752:1:exon
so has part: feature:1692609-1692807:1:exon

XP_005356492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1686632-1687271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690617-1690752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1692609-1692807:1:exon

Tmem171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmem171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 171 isoform X2
translation: MSSVGTTEPDRDQRDTHVSKLIFFLFILGAVLLCVGVLLSIFGYQACQYNRPLSHCSMVLKIAGPSCAVVGLGIVILARSRARLHLREEQRRGHQDPDQSFVCGESRQFAQCLIFGFLFLTSGMLISVLGIWVPGCGSELGPESMNETDIGEPEPQICSFLSLQIMGPLIVLVGLCFFVVAHVKKKNNLSSSRDTSDMEGGHAHSMEPVHITVGDSVIIFPPPPPPYFPESSAGTRPPGPNSLHHNENPPSYSSLFNYGSPTPEIQGAASERERELIYTISGPGSPSESSHPGHLPLDLPPIYEEKETALATPSDAPSEPSPP
SIO_010081: Tmem171
subclass of: SO_0000673
so part of: Tmem171
location: join(1686632..1687271,1690617..1690752,1692612..1692807)
location: region:1686632-1692807:1
so has part: feature:1686632-1687271:1:exon
so has part: feature:1690617-1690752:1:exon
so has part: feature:1692612-1692807:1:exon

XP_005356491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1686632-1687271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690617-1690752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1692612-1692807:1:exon

Tmem174
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tmem174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1731185..1732090
location: region:1731185-1732090:1
so has part: feature:1731185-1732090:1:exon
subclass of: SO_0000010

101989391
type: Gene
SIO_000068: ncbigene

position:1731185:1
position: 1731185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1732090:1
position: 1732090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731185-1732090:1:exon

Tmem174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tmem174
product: transmembrane protein 174
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_005356436.2
SIO_010081: Tmem174
subclass of: SO_0000673
so part of: Tmem174
location: join(1731185..1731813,1731985..1732090)
location: region:1731185-1732090:1
so has part: feature:1731185-1731813:1:exon
so has part: feature:1731985-1732090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1731185-1731813:1:exon

position:1731813:1
position: 1731813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1731985-1732090:1:exon

position:1731985:1
position: 1731985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmem174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tmem174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 174
translation: MEHSSNRPEDFPLNVFSVTPYTPSTADFQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQGVSHFEWTQLLGPILLSVGVTFILIAVCKFKMLSCQLCTESEERVLDSDPTSGGQSFVFTGINQPITFHGATVVQYIPPPYGSQEPLGMNAAAYLQPMINPCGLVPSSGAPAPTLSPPQYYTIYPQDNAAFVENEGYPPFLGVGNDRPSSDPDQLEGTQMEEEDCVRFSPPPYEEIYALPR
SIO_010081: Tmem174
subclass of: SO_0000673
so part of: Tmem174
location: join(1731185..1731813,1731985..1732090)
location: region:1731185-1732090:1
so has part: feature:1731185-1731813:1:exon
so has part: feature:1731985-1732090:1:exon

XP_005356493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1731185-1731813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1731985-1732090:1:exon

Foxd1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Foxd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2017546..2019913)
location: region:2017546-2019913:-1
so has part: feature:2017546-2019913:-1:exon
subclass of: SO_0000010

101980637
type: Gene
SIO_000068: ncbigene

position:2017546:-1
position: 2017546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019913:-1
position: 2019913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2017546-2019913:-1:exon

Foxd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Foxd1
product: forkhead box D1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783820.1
SIO_010081: Foxd1
subclass of: SO_0000673
so part of: Foxd1
location: complement(join(2017546..2018618,2018877..2019913))
location: region:2017546-2019913:-1
so has part: feature:2018877-2019913:-1:exon
so has part: feature:2017546-2018618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018877-2019913:-1:exon

position:2018877:-1
position: 2018877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017546-2018618:-1:exon

position:2018618:-1
position: 2018618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Foxd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Foxd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein D1
translation: MTLSTEMSDASGLAEETDIDVVGEGEDEDEEEDDDDEGGGGPRLPGSAQRRRRSYAGEDELEDLEEEDDDDDLLLASRPAASPAPPGPVPASGTGTGSCSGAGAGGSSGTGAGAGAGGGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPHAAAELARTAFGYRPHALGAALPGPLQAATVKAGGPGGTGALARSPFSIESLIGRSRGPAVASVQASPGAATGTAPGAGGGGCSAQAAAGPAAALTRSLVVAAAAAASSVSSSAALGTLHQGTALSSVENFTARISNC
SIO_010081: Foxd1
subclass of: SO_0000673
so part of: Foxd1
location: complement(join(2018217..2018618,2018877..2019581))
location: region:2018217-2019581:-1
so has part: feature:2018877-2019581:-1:exon
so has part: feature:2018217-2018618:-1:exon

XP_026639621.1
type: Protein
SIO_000068: ncbiprotein

position:2018217:-1
position: 2018217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019581:-1
position: 2019581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018877-2019581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2018217-2018618:-1:exon

Btf3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Btf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2064507..2071588
location: region:2064507-2071588:1
so has part: feature:2064507-2071588:1:exon
subclass of: SO_0000010

101989679
type: Gene
SIO_000068: ncbigene

position:2064507:1
position: 2064507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071588:1
position: 2071588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064507-2071588:1:exon

Btf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Btf3
product: basic transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_005356438.2
SIO_010081: Btf3
subclass of: SO_0000673
so part of: Btf3
location: join(2064507..2064634,2065174..2065242,2067693..2067806,2068075..2068276,2070599..2070655,2071287..2071588)
location: region:2064507-2071588:1
so has part: feature:2064507-2064634:1:exon
so has part: feature:2065174-2065242:1:exon
so has part: feature:2067693-2067806:1:exon
so has part: feature:2068075-2068276:1:exon
so has part: feature:2070599-2070655:1:exon
so has part: feature:2071287-2071588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2064507-2064634:1:exon

position:2064634:1
position: 2064634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2065174-2065242:1:exon

position:2065174:1
position: 2065174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065242:1
position: 2065242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2067693-2067806:1:exon

position:2067693:1
position: 2067693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067806:1
position: 2067806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2068075-2068276:1:exon

position:2068075:1
position: 2068075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068276:1
position: 2068276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2070599-2070655:1:exon

position:2070599:1
position: 2070599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070655:1
position: 2070655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2071287-2071588:1:exon

position:2071287:1
position: 2071287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Btf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Btf3
product: basic transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783856.1
SIO_010081: Btf3
subclass of: SO_0000673
so part of: Btf3
location: join(2064723..2064877,2065174..2065242,2067693..2067806,2068075..2068276,2070599..2070655,2071287..2071588)
location: region:2064723-2071588:1
so has part: feature:2064723-2064877:1:exon
so has part: feature:2065174-2065242:1:exon
so has part: feature:2067693-2067806:1:exon
so has part: feature:2068075-2068276:1:exon
so has part: feature:2070599-2070655:1:exon
so has part: feature:2071287-2071588:1:exon

position:2064723:1
position: 2064723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064723-2064877:1:exon

position:2064877:1
position: 2064877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2065174-2065242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2067693-2067806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2068075-2068276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2070599-2070655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2071287-2071588:1:exon

Btf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Btf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor BTF3 isoform X2
translation: MRRTGAPAQADSRGRGRARGGCPGDEATPSLPPPLGGTRGQEPQMKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEAN
SIO_010081: Btf3
subclass of: SO_0000673
so part of: Btf3
location: join(2064746..2064877,2065174..2065242,2067693..2067806,2068075..2068276,2070599..2070655,2071287..2071333)
location: region:2064746-2071333:1
so has part: feature:2064746-2064877:1:exon
so has part: feature:2065174-2065242:1:exon
so has part: feature:2067693-2067806:1:exon
so has part: feature:2068075-2068276:1:exon
so has part: feature:2070599-2070655:1:exon
so has part: feature:2071287-2071333:1:exon

XP_026639657.1
type: Protein
SIO_000068: ncbiprotein

position:2064746:1
position: 2064746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071333:1
position: 2071333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064746-2064877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2065174-2065242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2067693-2067806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2068075-2068276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2070599-2070655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2071287-2071333:1:exon

Btf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Btf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor BTF3 isoform X1
translation: MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEAN
SIO_010081: Btf3
subclass of: SO_0000673
so part of: Btf3
location: join(2065174..2065242,2067693..2067806,2068075..2068276,2070599..2070655,2071287..2071333)
location: region:2065174-2071333:1
so has part: feature:2065174-2065242:1:exon
so has part: feature:2067693-2067806:1:exon
so has part: feature:2068075-2068276:1:exon
so has part: feature:2070599-2070655:1:exon
so has part: feature:2071287-2071333:1:exon

XP_005356495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2065174-2065242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2067693-2067806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2068075-2068276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2070599-2070655:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2071287-2071333:1:exon

Ankra2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ankra2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2103263..2115368)
location: region:2103263-2115368:-1
so has part: feature:2103263-2115368:-1:exon
subclass of: SO_0000010

101990146
type: Gene
SIO_000068: ncbigene

position:2103263:-1
position: 2103263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2115368:-1
position: 2115368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2103263-2115368:-1:exon

Ankra2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ankra2
product: ankyrin repeat family A member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005356439.2
SIO_010081: Ankra2
subclass of: SO_0000673
so part of: Ankra2
location: complement(join(2103263..2103759,2104294..2104374,2104841..2104907,2105366..2105491,2105994..2106091,2108664..2108729,2111050..2111208,2112148..2112528,2114793..2115368))
location: region:2103263-2115368:-1
so has part: feature:2114793-2115368:-1:exon
so has part: feature:2112148-2112528:-1:exon
so has part: feature:2111050-2111208:-1:exon
so has part: feature:2108664-2108729:-1:exon
so has part: feature:2105994-2106091:-1:exon
so has part: feature:2105366-2105491:-1:exon
so has part: feature:2104841-2104907:-1:exon
so has part: feature:2104294-2104374:-1:exon
so has part: feature:2103263-2103759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2114793-2115368:-1:exon

position:2114793:-1
position: 2114793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2112148-2112528:-1:exon

position:2112148:-1
position: 2112148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112528:-1
position: 2112528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2111050-2111208:-1:exon

position:2111050:-1
position: 2111050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111208:-1
position: 2111208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2108664-2108729:-1:exon

position:2108664:-1
position: 2108664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108729:-1
position: 2108729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2105994-2106091:-1:exon

position:2105994:-1
position: 2105994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2106091:-1
position: 2106091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2105366-2105491:-1:exon

position:2105366:-1
position: 2105366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105491:-1
position: 2105491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2104841-2104907:-1:exon

position:2104841:-1
position: 2104841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104907:-1
position: 2104907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2104294-2104374:-1:exon

position:2104294:-1
position: 2104294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104374:-1
position: 2104374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2103263-2103759:-1:exon

position:2103759:-1
position: 2103759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ankra2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ankra2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat family A protein 2
translation: MATSANLDIGAQLIVEECPSSYSLSGMPDIKIEHQLDPNSEEGSAQGVAMGMKFILPNRFDMNVCSRFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIHTSPSPGIQVRHVYTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLENGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE
SIO_010081: Ankra2
subclass of: SO_0000673
so part of: Ankra2
location: complement(join(2103704..2103759,2104294..2104374,2104841..2104907,2105366..2105491,2105994..2106091,2108664..2108729,2111050..2111208,2112148..2112436))
location: region:2103704-2112436:-1
so has part: feature:2112148-2112436:-1:exon
so has part: feature:2111050-2111208:-1:exon
so has part: feature:2108664-2108729:-1:exon
so has part: feature:2105994-2106091:-1:exon
so has part: feature:2105366-2105491:-1:exon
so has part: feature:2104841-2104907:-1:exon
so has part: feature:2104294-2104374:-1:exon
so has part: feature:2103704-2103759:-1:exon

XP_005356496.1
type: Protein
SIO_000068: ncbiprotein

position:2103704:-1
position: 2103704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112436:-1
position: 2112436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2112148-2112436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2111050-2111208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2108664-2108729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2105994-2106091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2105366-2105491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2104841-2104907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2104294-2104374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2103704-2103759:-1:exon

Utp15
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Utp15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2115451..2136907
location: region:2115451-2136907:1
so has part: feature:2115451-2136907:1:exon
subclass of: SO_0000010

101990432
type: Gene
SIO_000068: ncbigene

position:2115451:1
position: 2115451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2136907:1
position: 2136907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2115451-2136907:1:exon

Utp15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Utp15
product: UTP15, small subunit processome component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005356441.3
SIO_010081: Utp15
subclass of: SO_0000673
so part of: Utp15
location: join(2115451..2115574,2116281..2116439,2118419..2118589,2120077..2120169,2120260..2120444,2121726..2121904,2122606..2122731,2125068..2125203,2125802..2125886,2126655..2126801,2128330..2128431,2129542..2129675,2130091..2130149,2133713..2136907)
location: region:2115451-2136907:1
so has part: feature:2115451-2115574:1:exon
so has part: feature:2116281-2116439:1:exon
so has part: feature:2118419-2118589:1:exon
so has part: feature:2120077-2120169:1:exon
so has part: feature:2120260-2120444:1:exon
so has part: feature:2121726-2121904:1:exon
so has part: feature:2122606-2122731:1:exon
so has part: feature:2125068-2125203:1:exon
so has part: feature:2125802-2125886:1:exon
so has part: feature:2126655-2126801:1:exon
so has part: feature:2128330-2128431:1:exon
so has part: feature:2129542-2129675:1:exon
so has part: feature:2130091-2130149:1:exon
so has part: feature:2133713-2136907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2115451-2115574:1:exon

position:2115574:1
position: 2115574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2116281-2116439:1:exon

position:2116281:1
position: 2116281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2116439:1
position: 2116439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2118419-2118589:1:exon

position:2118419:1
position: 2118419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2118589:1
position: 2118589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2120077-2120169:1:exon

position:2120077:1
position: 2120077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2120169:1
position: 2120169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2120260-2120444:1:exon

position:2120260:1
position: 2120260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2120444:1
position: 2120444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2121726-2121904:1:exon

position:2121726:1
position: 2121726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121904:1
position: 2121904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2122606-2122731:1:exon

position:2122606:1
position: 2122606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122731:1
position: 2122731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2125068-2125203:1:exon

position:2125068:1
position: 2125068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125203:1
position: 2125203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2125802-2125886:1:exon

position:2125802:1
position: 2125802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125886:1
position: 2125886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2126655-2126801:1:exon

position:2126655:1
position: 2126655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2126801:1
position: 2126801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2128330-2128431:1:exon

position:2128330:1
position: 2128330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2128431:1
position: 2128431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2129542-2129675:1:exon

position:2129542:1
position: 2129542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129675:1
position: 2129675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2130091-2130149:1:exon

position:2130091:1
position: 2130091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2130149:1
position: 2130149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2133713-2136907:1:exon

position:2133713:1
position: 2133713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Utp15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Utp15
product: UTP15, small subunit processome component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_026783796.1
SIO_010081: Utp15
subclass of: SO_0000673
so part of: Utp15
location: join(2115451..2115574,2118419..2118589,2120077..2120169,2120260..2120444,2121726..2121904,2122606..2122731,2125068..2125203,2125802..2125886,2126655..2126801,2128330..2128431,2129542..2129675,2130091..2130149,2133713..2136907)
location: region:2115451-2136907:1
so has part: feature:2115451-2115574:1:exon
so has part: feature:2118419-2118589:1:exon
so has part: feature:2120077-2120169:1:exon
so has part: feature:2120260-2120444:1:exon
so has part: feature:2121726-2121904:1:exon
so has part: feature:2122606-2122731:1:exon
so has part: feature:2125068-2125203:1:exon
so has part: feature:2125802-2125886:1:exon
so has part: feature:2126655-2126801:1:exon
so has part: feature:2128330-2128431:1:exon
so has part: feature:2129542-2129675:1:exon
so has part: feature:2130091-2130149:1:exon
so has part: feature:2133713-2136907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2115451-2115574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2118419-2118589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2120077-2120169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2120260-2120444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2121726-2121904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2122606-2122731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2125068-2125203:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2125802-2125886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2126655-2126801:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2128330-2128431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2129542-2129675:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2130091-2130149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2133713-2136907:1:exon

Utp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Utp15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 15 homolog
translation: MAGYKPVAIQTYPVLGEKITQDTLYWRNYRTPVQIKEFGAVSKVHFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYIKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYTASILSLALSHEDETIVVGMTNGILSVKHRKSESKKESLPRKRPAYRTFIKGKIYMKQQDDIMINRPAKKHLEWYDRDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLIRAAEIIIDIYLPVIGQSPIVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMTRNNSAPVAEHVPTELPEEEMTETPCQPADADKSS
SIO_010081: Utp15
subclass of: SO_0000673
so part of: Utp15
location: join(2118500..2118589,2120077..2120169,2120260..2120444,2121726..2121904,2122606..2122731,2125068..2125203,2125802..2125886,2126655..2126801,2128330..2128431,2129542..2129675,2130091..2130149,2133713..2133963)
location: region:2118500-2133963:1
so has part: feature:2118500-2118589:1:exon
so has part: feature:2120077-2120169:1:exon
so has part: feature:2120260-2120444:1:exon
so has part: feature:2121726-2121904:1:exon
so has part: feature:2122606-2122731:1:exon
so has part: feature:2125068-2125203:1:exon
so has part: feature:2125802-2125886:1:exon
so has part: feature:2126655-2126801:1:exon
so has part: feature:2128330-2128431:1:exon
so has part: feature:2129542-2129675:1:exon
so has part: feature:2130091-2130149:1:exon
so has part: feature:2133713-2133963:1:exon

XP_026639597.1
type: Protein
SIO_000068: ncbiprotein

position:2118500:1
position: 2118500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133963:1
position: 2133963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2118500-2118589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2120077-2120169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2120260-2120444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121726-2121904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2122606-2122731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2125068-2125203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2125802-2125886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2126655-2126801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2128330-2128431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2129542-2129675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2130091-2130149:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2133713-2133963:1:exon

Utp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Utp15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 15 homolog
translation: MAGYKPVAIQTYPVLGEKITQDTLYWRNYRTPVQIKEFGAVSKVHFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYIKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYTASILSLALSHEDETIVVGMTNGILSVKHRKSESKKESLPRKRPAYRTFIKGKIYMKQQDDIMINRPAKKHLEWYDRDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLIRAAEIIIDIYLPVIGQSPIVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMTRNNSAPVAEHVPTELPEEEMTETPCQPADADKSS
SIO_010081: Utp15
subclass of: SO_0000673
so part of: Utp15
location: join(2118500..2118589,2120077..2120169,2120260..2120444,2121726..2121904,2122606..2122731,2125068..2125203,2125802..2125886,2126655..2126801,2128330..2128431,2129542..2129675,2130091..2130149,2133713..2133963)
location: region:2118500-2133963:1
so has part: feature:2118500-2118589:1:exon
so has part: feature:2120077-2120169:1:exon
so has part: feature:2120260-2120444:1:exon
so has part: feature:2121726-2121904:1:exon
so has part: feature:2122606-2122731:1:exon
so has part: feature:2125068-2125203:1:exon
so has part: feature:2125802-2125886:1:exon
so has part: feature:2126655-2126801:1:exon
so has part: feature:2128330-2128431:1:exon
so has part: feature:2129542-2129675:1:exon
so has part: feature:2130091-2130149:1:exon
so has part: feature:2133713-2133963:1:exon

XP_005356498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2118500-2118589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2120077-2120169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2120260-2120444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121726-2121904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2122606-2122731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2125068-2125203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2125802-2125886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2126655-2126801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2128330-2128431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2129542-2129675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2130091-2130149:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2133713-2133963:1:exon

Arhgef28
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Arhgef28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2177088..2472588
location: region:2177088-2472588:1
so has part: feature:2177088-2472588:1:exon
subclass of: SO_0000010

101990908
type: Gene
SIO_000068: ncbigene

position:2177088:1
position: 2177088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2472588:1
position: 2472588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2177088-2472588:1:exon

Arhgef28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef28
product: Rho guanine nucleotide exchange factor 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005356442.3
SIO_010081: Arhgef28
subclass of: SO_0000673
so part of: Arhgef28
location: join(2177088..2177445,2234564..2234607,2285609..2285756,2287561..2287854,2312187..2312370,2314884..2315064,2320282..2320354,2335809..2335861,2336337..2336397,2371504..2371625,2375235..2375515,2379871..2380066,2382956..2383067,2386707..2386749,2389783..2389906,2390171..2390303,2397687..2397742,2398683..2398731,2400525..2400669,2400754..2400881,2402451..2402591,2405729..2405976,2410607..2410729,2411987..2412104,2414490..2414744,2416372..2416448,2419572..2419750,2420688..2420779,2422651..2422833,2424830..2424967,2428069..2428169,2430810..2430848,2430947..2430994,2438540..2439016,2440311..2440608,2472237..2472588)
location: region:2177088-2472588:1
so has part: feature:2177088-2177445:1:exon
so has part: feature:2234564-2234607:1:exon
so has part: feature:2285609-2285756:1:exon
so has part: feature:2287561-2287854:1:exon
so has part: feature:2312187-2312370:1:exon
so has part: feature:2314884-2315064:1:exon
so has part: feature:2320282-2320354:1:exon
so has part: feature:2335809-2335861:1:exon
so has part: feature:2336337-2336397:1:exon
so has part: feature:2371504-2371625:1:exon
so has part: feature:2375235-2375515:1:exon
so has part: feature:2379871-2380066:1:exon
so has part: feature:2382956-2383067:1:exon
so has part: feature:2386707-2386749:1:exon
so has part: feature:2389783-2389906:1:exon
so has part: feature:2390171-2390303:1:exon
so has part: feature:2397687-2397742:1:exon
so has part: feature:2398683-2398731:1:exon
so has part: feature:2400525-2400669:1:exon
so has part: feature:2400754-2400881:1:exon
so has part: feature:2402451-2402591:1:exon
so has part: feature:2405729-2405976:1:exon
so has part: feature:2410607-2410729:1:exon
so has part: feature:2411987-2412104:1:exon
so has part: feature:2414490-2414744:1:exon
so has part: feature:2416372-2416448:1:exon
so has part: feature:2419572-2419750:1:exon
so has part: feature:2420688-2420779:1:exon
so has part: feature:2422651-2422833:1:exon
so has part: feature:2424830-2424967:1:exon
so has part: feature:2428069-2428169:1:exon
so has part: feature:2430810-2430848:1:exon
so has part: feature:2430947-2430994:1:exon
so has part: feature:2438540-2439016:1:exon
so has part: feature:2440311-2440608:1:exon
so has part: feature:2472237-2472588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2177088-2177445:1:exon

position:2177445:1
position: 2177445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2234564-2234607:1:exon

position:2234564:1
position: 2234564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2234607:1
position: 2234607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2285609-2285756:1:exon

position:2285609:1
position: 2285609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2285756:1
position: 2285756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2287561-2287854:1:exon

position:2287561:1
position: 2287561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287854:1
position: 2287854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2312187-2312370:1:exon

position:2312187:1
position: 2312187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312370:1
position: 2312370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2314884-2315064:1:exon

position:2314884:1
position: 2314884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315064:1
position: 2315064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2320282-2320354:1:exon

position:2320282:1
position: 2320282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2320354:1
position: 2320354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2335809-2335861:1:exon

position:2335809:1
position: 2335809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335861:1
position: 2335861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2336337-2336397:1:exon

position:2336337:1
position: 2336337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336397:1
position: 2336397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2371504-2371625:1:exon

position:2371504:1
position: 2371504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2371625:1
position: 2371625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2375235-2375515:1:exon

position:2375235:1
position: 2375235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2375515:1
position: 2375515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2379871-2380066:1:exon

position:2379871:1
position: 2379871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380066:1
position: 2380066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2382956-2383067:1:exon

position:2382956:1
position: 2382956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383067:1
position: 2383067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2386707-2386749:1:exon

position:2386707:1
position: 2386707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386749:1
position: 2386749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2389783-2389906:1:exon

position:2389783:1
position: 2389783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389906:1
position: 2389906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2390171-2390303:1:exon

position:2390171:1
position: 2390171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2390303:1
position: 2390303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2397687-2397742:1:exon

position:2397687:1
position: 2397687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2397742:1
position: 2397742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2398683-2398731:1:exon

position:2398683:1
position: 2398683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398731:1
position: 2398731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2400525-2400669:1:exon

position:2400525:1
position: 2400525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400669:1
position: 2400669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2400754-2400881:1:exon

position:2400754:1
position: 2400754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400881:1
position: 2400881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2402451-2402591:1:exon

position:2402451:1
position: 2402451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2402591:1
position: 2402591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2405729-2405976:1:exon

position:2405729:1
position: 2405729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405976:1
position: 2405976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2410607-2410729:1:exon

position:2410607:1
position: 2410607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2410729:1
position: 2410729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2411987-2412104:1:exon

position:2411987:1
position: 2411987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412104:1
position: 2412104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2414490-2414744:1:exon

position:2414490:1
position: 2414490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414744:1
position: 2414744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2416372-2416448:1:exon

position:2416372:1
position: 2416372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416448:1
position: 2416448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2419572-2419750:1:exon

position:2419572:1
position: 2419572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419750:1
position: 2419750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2420688-2420779:1:exon

position:2420688:1
position: 2420688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420779:1
position: 2420779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2422651-2422833:1:exon

position:2422651:1
position: 2422651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422833:1
position: 2422833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2424830-2424967:1:exon

position:2424830:1
position: 2424830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424967:1
position: 2424967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2428069-2428169:1:exon

position:2428069:1
position: 2428069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428169:1
position: 2428169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2430810-2430848:1:exon

position:2430810:1
position: 2430810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430848:1
position: 2430848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2430947-2430994:1:exon

position:2430947:1
position: 2430947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430994:1
position: 2430994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2438540-2439016:1:exon

position:2438540:1
position: 2438540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439016:1
position: 2439016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2440311-2440608:1:exon

position:2440311:1
position: 2440311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440608:1
position: 2440608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2472237-2472588:1:exon

position:2472237:1
position: 2472237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arhgef28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X1
translation: MRRWRRARQAGDAGAMELSCREVPLYGQRTVYAKFGKNVYLPEDAEFYFIYDGSHQRHVVIAERIEANVLQASIPGHWLQETVMVSVCLCSEGYSPVTMGSGSVTYVDNMACRLARLLVTQADRLTACSHQMLLTPFALTMEALPALDEELVLALSQLELPLGWTVLGNFSLEVSLHRESLLHLAVRWGLPKLFHFLLCLPGGVKALELPNEEGTTPLDLALHGGHSMLVEDIANFQGSRSPGFSRLRLHEDASLQFAHSSETLTLTVNHTAEHLLEADIKLFRKYFWDRTFLVKALEQEAKTEERRPTMPSGAVETEEEIKNVESDRSPPEEEDGKCVKSQVDGQDEHEDQERLDLDHSFDGFKKSKHAPTSLAAGQLSDVLNGGDEVYANCMVIDQVGDLDINYINIEGLSAHTSPESMRSTLGPQACRHIPPPDCSPCGHPLGEDSEGPASTATLQPCVSPASSCTSQLNLPFGLHEFEKEQSHLKKRSSSLDALNADSEGEGHSQPPICYAVGSSRTGLPSGDELDSFETSAEADCNISRTESLSLSSTLHSKESLLSGIRSRSYSCSSPKVSVGKPRLVRDFTVCSSTEEQRSYSFTEPPGEKRIQEEEWEEYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKMKNKEAKDKEKPNRHQFVPGTFSGVLQCSGCEKTLLGKESLQCANCKASTHKGCKDAVPPCTKKFQEKYNKNKPQTILGSSSLRDAPQPGLSLHPSSSMPIGLPAGRKEAAGQVHPLSRSVPGTTLESFRRSVTSLELEGDSTSWRSRSHSDELYQSMGSSPSTESFMMEDVVDSSLWSDLSSDAQEFEAESWSLVVDPSFCSRQEKDVIKRQDVIFELMQTEVHHMQTLLIMSEVFRKGMKEELQLDHSTVDKIFPCLDELLETHRHFFFSMKERRQESCMGNDRNFVINRIGDILVQQFSEENASKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKIRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKERTEEHKDLCKALGLIKDMIAAVDLKVSEYEKNQKWLEILNKIENKTYTKLKNGHVFRKQALMTKERALLHDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFEDVHLEPHLLIKPDPGEPPQAASLLAAALKEAESLQVAVKASKMGDGSQSPSPEEGSGGAVLTDAFSSQDVPASPTASLVTEGTEGRGCWDVDPGLQGVVTDLAVSDAGEKVEYRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQRESLAFFRGGPLQDQEKSRYLEKQREELANIHKLQHQFQQEQRRWHRLCDQQQREQEAQESWLQARERECQSQEELLLRHRSELDHQLQEYQQSLERLREGQRMVERERQRMRVQQGLLGHCKHSRQRSLPAVFSPENKEVMELNRAESLCHEDSFFINEALVHMSLNTSNKPNPSGVPWDTYPPGVSPFDLVRTSDNQTELKRDVSQPPDVNHELWTATGPSHEIPALQVNVQDSCKNDLNSFQSDSSDPQDTSQHGPQPQMLPTEVKLTLPMVASQGGDAGDGAEENIVYL
SIO_010081: Arhgef28
subclass of: SO_0000673
so part of: Arhgef28
location: join(2177412..2177445,2234564..2234607,2285609..2285756,2287561..2287854,2312187..2312370,2314884..2315064,2320282..2320354,2335809..2335861,2336337..2336397,2371504..2371625,2375235..2375515,2379871..2380066,2382956..2383067,2386707..2386749,2389783..2389906,2390171..2390303,2397687..2397742,2398683..2398731,2400525..2400669,2400754..2400881,2402451..2402591,2405729..2405976,2410607..2410729,2411987..2412104,2414490..2414744,2416372..2416448,2419572..2419750,2420688..2420779,2422651..2422833,2424830..2424967,2428069..2428169,2430810..2430848,2430947..2430994,2438540..2439016,2440311..2440608,2472237..2472400)
location: region:2177412-2472400:1
so has part: feature:2177412-2177445:1:exon
so has part: feature:2234564-2234607:1:exon
so has part: feature:2285609-2285756:1:exon
so has part: feature:2287561-2287854:1:exon
so has part: feature:2312187-2312370:1:exon
so has part: feature:2314884-2315064:1:exon
so has part: feature:2320282-2320354:1:exon
so has part: feature:2335809-2335861:1:exon
so has part: feature:2336337-2336397:1:exon
so has part: feature:2371504-2371625:1:exon
so has part: feature:2375235-2375515:1:exon
so has part: feature:2379871-2380066:1:exon
so has part: feature:2382956-2383067:1:exon
so has part: feature:2386707-2386749:1:exon
so has part: feature:2389783-2389906:1:exon
so has part: feature:2390171-2390303:1:exon
so has part: feature:2397687-2397742:1:exon
so has part: feature:2398683-2398731:1:exon
so has part: feature:2400525-2400669:1:exon
so has part: feature:2400754-2400881:1:exon
so has part: feature:2402451-2402591:1:exon
so has part: feature:2405729-2405976:1:exon
so has part: feature:2410607-2410729:1:exon
so has part: feature:2411987-2412104:1:exon
so has part: feature:2414490-2414744:1:exon
so has part: feature:2416372-2416448:1:exon
so has part: feature:2419572-2419750:1:exon
so has part: feature:2420688-2420779:1:exon
so has part: feature:2422651-2422833:1:exon
so has part: feature:2424830-2424967:1:exon
so has part: feature:2428069-2428169:1:exon
so has part: feature:2430810-2430848:1:exon
so has part: feature:2430947-2430994:1:exon
so has part: feature:2438540-2439016:1:exon
so has part: feature:2440311-2440608:1:exon
so has part: feature:2472237-2472400:1:exon

XP_005356499.2
type: Protein
SIO_000068: ncbiprotein

position:2177412:1
position: 2177412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2472400:1
position: 2472400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2177412-2177445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2234564-2234607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2285609-2285756:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2287561-2287854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2312187-2312370:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2314884-2315064:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2320282-2320354:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335809-2335861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336337-2336397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2371504-2371625:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375235-2375515:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2379871-2380066:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2382956-2383067:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2386707-2386749:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2389783-2389906:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2390171-2390303:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2397687-2397742:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2398683-2398731:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2400525-2400669:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2400754-2400881:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2402451-2402591:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2405729-2405976:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2410607-2410729:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2411987-2412104:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2414490-2414744:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2416372-2416448:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2419572-2419750:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2420688-2420779:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2422651-2422833:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2424830-2424967:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2428069-2428169:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2430810-2430848:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2430947-2430994:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2438540-2439016:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2440311-2440608:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2472237-2472400:1:exon

Arhgef28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef28
product: Rho guanine nucleotide exchange factor 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026783747.1
SIO_010081: Arhgef28
subclass of: SO_0000673
so part of: Arhgef28
location: join(2177521..2177677,2234564..2234607,2285609..2285756,2287561..2287854,2312187..2312370,2314884..2315064,2320282..2320354,2335809..2335861,2336337..2336397,2371504..2371625,2375235..2375515,2379871..2380066,2382956..2383067,2386707..2386749,2389783..2389906,2390171..2390303,2397687..2397742,2398683..2398731,2400525..2400669,2400754..2400881,2402451..2402591,2405729..2405976,2410607..2410729,2411987..2412104,2414490..2414744,2416372..2416448,2419572..2419750,2420688..2420779,2422651..2422833,2424830..2424967,2428069..2428169,2430810..2430848,2430947..2430994,2438540..2439016,2440311..2440608,2472237..2472588)
location: region:2177521-2472588:1
so has part: feature:2177521-2177677:1:exon
so has part: feature:2234564-2234607:1:exon
so has part: feature:2285609-2285756:1:exon
so has part: feature:2287561-2287854:1:exon
so has part: feature:2312187-2312370:1:exon
so has part: feature:2314884-2315064:1:exon
so has part: feature:2320282-2320354:1:exon
so has part: feature:2335809-2335861:1:exon
so has part: feature:2336337-2336397:1:exon
so has part: feature:2371504-2371625:1:exon
so has part: feature:2375235-2375515:1:exon
so has part: feature:2379871-2380066:1:exon
so has part: feature:2382956-2383067:1:exon
so has part: feature:2386707-2386749:1:exon
so has part: feature:2389783-2389906:1:exon
so has part: feature:2390171-2390303:1:exon
so has part: feature:2397687-2397742:1:exon
so has part: feature:2398683-2398731:1:exon
so has part: feature:2400525-2400669:1:exon
so has part: feature:2400754-2400881:1:exon
so has part: feature:2402451-2402591:1:exon
so has part: feature:2405729-2405976:1:exon
so has part: feature:2410607-2410729:1:exon
so has part: feature:2411987-2412104:1:exon
so has part: feature:2414490-2414744:1:exon
so has part: feature:2416372-2416448:1:exon
so has part: feature:2419572-2419750:1:exon
so has part: feature:2420688-2420779:1:exon
so has part: feature:2422651-2422833:1:exon
so has part: feature:2424830-2424967:1:exon
so has part: feature:2428069-2428169:1:exon
so has part: feature:2430810-2430848:1:exon
so has part: feature:2430947-2430994:1:exon
so has part: feature:2438540-2439016:1:exon
so has part: feature:2440311-2440608:1:exon
so has part: feature:2472237-2472588:1:exon

position:2177521:1
position: 2177521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2177521-2177677:1:exon

position:2177677:1
position: 2177677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2234564-2234607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2285609-2285756:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2287561-2287854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2312187-2312370:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2314884-2315064:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2320282-2320354:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335809-2335861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336337-2336397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2371504-2371625:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375235-2375515:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2379871-2380066:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2382956-2383067:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2386707-2386749:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2389783-2389906:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2390171-2390303:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2397687-2397742:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2398683-2398731:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2400525-2400669:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2400754-2400881:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2402451-2402591:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2405729-2405976:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2410607-2410729:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2411987-2412104:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2414490-2414744:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2416372-2416448:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2419572-2419750:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2420688-2420779:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2422651-2422833:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2424830-2424967:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2428069-2428169:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2430810-2430848:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2430947-2430994:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2438540-2439016:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2440311-2440608:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2472237-2472588:1:exon

Arhgef28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X2
translation: MELSCREVPLYGQRTVYAKFGKNVYLPEDAEFYFIYDGSHQRHVVIAERIEANVLQASIPGHWLQETVMVSVCLCSEGYSPVTMGSGSVTYVDNMACRLARLLVTQADRLTACSHQMLLTPFALTMEALPALDEELVLALSQLELPLGWTVLGNFSLEVSLHRESLLHLAVRWGLPKLFHFLLCLPGGVKALELPNEEGTTPLDLALHGGHSMLVEDIANFQGSRSPGFSRLRLHEDASLQFAHSSETLTLTVNHTAEHLLEADIKLFRKYFWDRTFLVKALEQEAKTEERRPTMPSGAVETEEEIKNVESDRSPPEEEDGKCVKSQVDGQDEHEDQERLDLDHSFDGFKKSKHAPTSLAAGQLSDVLNGGDEVYANCMVIDQVGDLDINYINIEGLSAHTSPESMRSTLGPQACRHIPPPDCSPCGHPLGEDSEGPASTATLQPCVSPASSCTSQLNLPFGLHEFEKEQSHLKKRSSSLDALNADSEGEGHSQPPICYAVGSSRTGLPSGDELDSFETSAEADCNISRTESLSLSSTLHSKESLLSGIRSRSYSCSSPKVSVGKPRLVRDFTVCSSTEEQRSYSFTEPPGEKRIQEEEWEEYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKMKNKEAKDKEKPNRHQFVPGTFSGVLQCSGCEKTLLGKESLQCANCKASTHKGCKDAVPPCTKKFQEKYNKNKPQTILGSSSLRDAPQPGLSLHPSSSMPIGLPAGRKEAAGQVHPLSRSVPGTTLESFRRSVTSLELEGDSTSWRSRSHSDELYQSMGSSPSTESFMMEDVVDSSLWSDLSSDAQEFEAESWSLVVDPSFCSRQEKDVIKRQDVIFELMQTEVHHMQTLLIMSEVFRKGMKEELQLDHSTVDKIFPCLDELLETHRHFFFSMKERRQESCMGNDRNFVINRIGDILVQQFSEENASKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKIRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKERTEEHKDLCKALGLIKDMIAAVDLKVSEYEKNQKWLEILNKIENKTYTKLKNGHVFRKQALMTKERALLHDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFEDVHLEPHLLIKPDPGEPPQAASLLAAALKEAESLQVAVKASKMGDGSQSPSPEEGSGGAVLTDAFSSQDVPASPTASLVTEGTEGRGCWDVDPGLQGVVTDLAVSDAGEKVEYRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQRESLAFFRGGPLQDQEKSRYLEKQREELANIHKLQHQFQQEQRRWHRLCDQQQREQEAQESWLQARERECQSQEELLLRHRSELDHQLQEYQQSLERLREGQRMVERERQRMRVQQGLLGHCKHSRQRSLPAVFSPENKEVMELNRAESLCHEDSFFINEALVHMSLNTSNKPNPSGVPWDTYPPGVSPFDLVRTSDNQTELKRDVSQPPDVNHELWTATGPSHEIPALQVNVQDSCKNDLNSFQSDSSDPQDTSQHGPQPQMLPTEVKLTLPMVASQGGDAGDGAEENIVYL
SIO_010081: Arhgef28
subclass of: SO_0000673
so part of: Arhgef28
location: join(2234575..2234607,2285609..2285756,2287561..2287854,2312187..2312370,2314884..2315064,2320282..2320354,2335809..2335861,2336337..2336397,2371504..2371625,2375235..2375515,2379871..2380066,2382956..2383067,2386707..2386749,2389783..2389906,2390171..2390303,2397687..2397742,2398683..2398731,2400525..2400669,2400754..2400881,2402451..2402591,2405729..2405976,2410607..2410729,2411987..2412104,2414490..2414744,2416372..2416448,2419572..2419750,2420688..2420779,2422651..2422833,2424830..2424967,2428069..2428169,2430810..2430848,2430947..2430994,2438540..2439016,2440311..2440608,2472237..2472400)
location: region:2234575-2472400:1
so has part: feature:2234575-2234607:1:exon
so has part: feature:2285609-2285756:1:exon
so has part: feature:2287561-2287854:1:exon
so has part: feature:2312187-2312370:1:exon
so has part: feature:2314884-2315064:1:exon
so has part: feature:2320282-2320354:1:exon
so has part: feature:2335809-2335861:1:exon
so has part: feature:2336337-2336397:1:exon
so has part: feature:2371504-2371625:1:exon
so has part: feature:2375235-2375515:1:exon
so has part: feature:2379871-2380066:1:exon
so has part: feature:2382956-2383067:1:exon
so has part: feature:2386707-2386749:1:exon
so has part: feature:2389783-2389906:1:exon
so has part: feature:2390171-2390303:1:exon
so has part: feature:2397687-2397742:1:exon
so has part: feature:2398683-2398731:1:exon
so has part: feature:2400525-2400669:1:exon
so has part: feature:2400754-2400881:1:exon
so has part: feature:2402451-2402591:1:exon
so has part: feature:2405729-2405976:1:exon
so has part: feature:2410607-2410729:1:exon
so has part: feature:2411987-2412104:1:exon
so has part: feature:2414490-2414744:1:exon
so has part: feature:2416372-2416448:1:exon
so has part: feature:2419572-2419750:1:exon
so has part: feature:2420688-2420779:1:exon
so has part: feature:2422651-2422833:1:exon
so has part: feature:2424830-2424967:1:exon
so has part: feature:2428069-2428169:1:exon
so has part: feature:2430810-2430848:1:exon
so has part: feature:2430947-2430994:1:exon
so has part: feature:2438540-2439016:1:exon
so has part: feature:2440311-2440608:1:exon
so has part: feature:2472237-2472400:1:exon

XP_026639548.1
type: Protein
SIO_000068: ncbiprotein

position:2234575:1
position: 2234575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2234575-2234607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2285609-2285756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2287561-2287854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2312187-2312370:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2314884-2315064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2320282-2320354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335809-2335861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2336337-2336397:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2371504-2371625:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2375235-2375515:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2379871-2380066:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2382956-2383067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2386707-2386749:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2389783-2389906:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2390171-2390303:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2397687-2397742:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2398683-2398731:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2400525-2400669:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2400754-2400881:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2402451-2402591:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2405729-2405976:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2410607-2410729:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2411987-2412104:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2414490-2414744:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2416372-2416448:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2419572-2419750:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2420688-2420779:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2422651-2422833:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2424830-2424967:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2428069-2428169:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2430810-2430848:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2430947-2430994:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2438540-2439016:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2440311-2440608:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2472237-2472400:1:exon

LOC101991378
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101991378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2321277..2321594)
location: region:2321277-2321594:-1
so has part: feature:2321277-2321594:-1:exon

101991378
type: Gene
SIO_000068: ncbigene

position:2321277:-1
position: 2321277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2321594:-1
position: 2321594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2321277-2321594:-1:exon

LOC101991378
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101991378
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC101991378
subclass of: SO_0000673
so part of: LOC101991378
location: complement(2321277..2321594)
location: region:2321277-2321594:-1
so has part: feature:2321277-2321594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2321277-2321594:-1:exon

Arhgef28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arhgef28
product: Rho guanine nucleotide exchange factor 28, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783748.1
SIO_010081: Arhgef28
subclass of: SO_0000673
so part of: Arhgef28
location: join(2353397..2353547,2371504..2371625,2375235..2375515,2379871..2380066,2382956..2383067,2386707..2386749,2389783..2389906,2390171..2390303,2397687..2397742,2398683..2398731,2400525..2400669,2400754..2400881,2402451..2402591,2405729..2405976,2410607..2410729,2411987..2412104,2414490..2414744,2416372..2416448,2419572..2419750,2420688..2420779,2422651..2422833,2424830..2424967,2428069..2428169,2430810..2430848,2430947..2430994,2438540..2439016,2440311..2440608,2472237..2472588)
location: region:2353397-2472588:1
so has part: feature:2353397-2353547:1:exon
so has part: feature:2371504-2371625:1:exon
so has part: feature:2375235-2375515:1:exon
so has part: feature:2379871-2380066:1:exon
so has part: feature:2382956-2383067:1:exon
so has part: feature:2386707-2386749:1:exon
so has part: feature:2389783-2389906:1:exon
so has part: feature:2390171-2390303:1:exon
so has part: feature:2397687-2397742:1:exon
so has part: feature:2398683-2398731:1:exon
so has part: feature:2400525-2400669:1:exon
so has part: feature:2400754-2400881:1:exon
so has part: feature:2402451-2402591:1:exon
so has part: feature:2405729-2405976:1:exon
so has part: feature:2410607-2410729:1:exon
so has part: feature:2411987-2412104:1:exon
so has part: feature:2414490-2414744:1:exon
so has part: feature:2416372-2416448:1:exon
so has part: feature:2419572-2419750:1:exon
so has part: feature:2420688-2420779:1:exon
so has part: feature:2422651-2422833:1:exon
so has part: feature:2424830-2424967:1:exon
so has part: feature:2428069-2428169:1:exon
so has part: feature:2430810-2430848:1:exon
so has part: feature:2430947-2430994:1:exon
so has part: feature:2438540-2439016:1:exon
so has part: feature:2440311-2440608:1:exon
so has part: feature:2472237-2472588:1:exon

position:2353397:1
position: 2353397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353397-2353547:1:exon

position:2353547:1
position: 2353547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2371504-2371625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2375235-2375515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2379871-2380066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2382956-2383067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2386707-2386749:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2389783-2389906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2390171-2390303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2397687-2397742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2398683-2398731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2400525-2400669:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2400754-2400881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2402451-2402591:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2405729-2405976:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2410607-2410729:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2411987-2412104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2414490-2414744:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2416372-2416448:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2419572-2419750:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2420688-2420779:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2422651-2422833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2424830-2424967:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2428069-2428169:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2430810-2430848:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2430947-2430994:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2438540-2439016:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2440311-2440608:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2472237-2472588:1:exon

Arhgef28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arhgef28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X3
translation: MDSDSDSPFNYSWPSFPKMKIRRRASKKDHSFDGFKKSKHAPTSLAAGQLSDVLNGGDEVYANCMVIDQVGDLDINYINIEGLSAHTSPESMRSTLGPQACRHIPPPDCSPCGHPLGEDSEGPASTATLQPCVSPASSCTSQLNLPFGLHEFEKEQSHLKKRSSSLDALNADSEGEGHSQPPICYAVGSSRTGLPSGDELDSFETSAEADCNISRTESLSLSSTLHSKESLLSGIRSRSYSCSSPKVSVGKPRLVRDFTVCSSTEEQRSYSFTEPPGEKRIQEEEWEEYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKMKNKEAKDKEKPNRHQFVPGTFSGVLQCSGCEKTLLGKESLQCANCKASTHKGCKDAVPPCTKKFQEKYNKNKPQTILGSSSLRDAPQPGLSLHPSSSMPIGLPAGRKEAAGQVHPLSRSVPGTTLESFRRSVTSLELEGDSTSWRSRSHSDELYQSMGSSPSTESFMMEDVVDSSLWSDLSSDAQEFEAESWSLVVDPSFCSRQEKDVIKRQDVIFELMQTEVHHMQTLLIMSEVFRKGMKEELQLDHSTVDKIFPCLDELLETHRHFFFSMKERRQESCMGNDRNFVINRIGDILVQQFSEENASKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKIRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKERTEEHKDLCKALGLIKDMIAAVDLKVSEYEKNQKWLEILNKIENKTYTKLKNGHVFRKQALMTKERALLHDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFEDVHLEPHLLIKPDPGEPPQAASLLAAALKEAESLQVAVKASKMGDGSQSPSPEEGSGGAVLTDAFSSQDVPASPTASLVTEGTEGRGCWDVDPGLQGVVTDLAVSDAGEKVEYRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQRESLAFFRGGPLQDQEKSRYLEKQREELANIHKLQHQFQQEQRRWHRLCDQQQREQEAQESWLQARERECQSQEELLLRHRSELDHQLQEYQQSLERLREGQRMVERERQRMRVQQGLLGHCKHSRQRSLPAVFSPENKEVMELNRAESLCHEDSFFINEALVHMSLNTSNKPNPSGVPWDTYPPGVSPFDLVRTSDNQTELKRDVSQPPDVNHELWTATGPSHEIPALQVNVQDSCKNDLNSFQSDSSDPQDTSQHGPQPQMLPTEVKLTLPMVASQGGDAGDGAEENIVYL
SIO_010081: Arhgef28
subclass of: SO_0000673
so part of: Arhgef28
location: join(2353463..2353547,2371504..2371625,2375235..2375515,2379871..2380066,2382956..2383067,2386707..2386749,2389783..2389906,2390171..2390303,2397687..2397742,2398683..2398731,2400525..2400669,2400754..2400881,2402451..2402591,2405729..2405976,2410607..2410729,2411987..2412104,2414490..2414744,2416372..2416448,2419572..2419750,2420688..2420779,2422651..2422833,2424830..2424967,2428069..2428169,2430810..2430848,2430947..2430994,2438540..2439016,2440311..2440608,2472237..2472400)
location: region:2353463-2472400:1
so has part: feature:2353463-2353547:1:exon
so has part: feature:2371504-2371625:1:exon
so has part: feature:2375235-2375515:1:exon
so has part: feature:2379871-2380066:1:exon
so has part: feature:2382956-2383067:1:exon
so has part: feature:2386707-2386749:1:exon
so has part: feature:2389783-2389906:1:exon
so has part: feature:2390171-2390303:1:exon
so has part: feature:2397687-2397742:1:exon
so has part: feature:2398683-2398731:1:exon
so has part: feature:2400525-2400669:1:exon
so has part: feature:2400754-2400881:1:exon
so has part: feature:2402451-2402591:1:exon
so has part: feature:2405729-2405976:1:exon
so has part: feature:2410607-2410729:1:exon
so has part: feature:2411987-2412104:1:exon
so has part: feature:2414490-2414744:1:exon
so has part: feature:2416372-2416448:1:exon
so has part: feature:2419572-2419750:1:exon
so has part: feature:2420688-2420779:1:exon
so has part: feature:2422651-2422833:1:exon
so has part: feature:2424830-2424967:1:exon
so has part: feature:2428069-2428169:1:exon
so has part: feature:2430810-2430848:1:exon
so has part: feature:2430947-2430994:1:exon
so has part: feature:2438540-2439016:1:exon
so has part: feature:2440311-2440608:1:exon
so has part: feature:2472237-2472400:1:exon

XP_026639549.1
type: Protein
SIO_000068: ncbiprotein

position:2353463:1
position: 2353463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353463-2353547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2371504-2371625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2375235-2375515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2379871-2380066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2382956-2383067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2386707-2386749:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2389783-2389906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2390171-2390303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2397687-2397742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2398683-2398731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2400525-2400669:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2400754-2400881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2402451-2402591:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2405729-2405976:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2410607-2410729:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2411987-2412104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2414490-2414744:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2416372-2416448:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2419572-2419750:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2420688-2420779:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2422651-2422833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2424830-2424967:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2428069-2428169:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2430810-2430848:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2430947-2430994:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2438540-2439016:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2440311-2440608:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2472237-2472400:1:exon

LOC101991657
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101991657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2653203..2654309
location: region:2653203-2654309:1
so has part: feature:2653203-2654309:1:exon

101991657
type: Gene
SIO_000068: ncbigene

position:2653203:1
position: 2653203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2654309:1
position: 2654309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653203-2654309:1:exon

LOC101991657
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101991657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC101991657
subclass of: SO_0000673
so part of: LOC101991657
location: 2653203..2653788
location: region:2653203-2653788:1
so has part: feature:2653203-2653788:1:exon

position:2653788:1
position: 2653788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653203-2653788:1:exon

LOC101991657
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101991657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC101991657
subclass of: SO_0000673
so part of: LOC101991657
location: 2653821..2654309
location: region:2653821-2654309:1
so has part: feature:2653821-2654309:1:exon

position:2653821:1
position: 2653821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653821-2654309:1:exon

LOC101980909
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101980909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3023206..3023632
location: region:3023206-3023632:1
so has part: feature:3023206-3023632:1:exon

101980909
type: Gene
SIO_000068: ncbigene

position:3023206:1
position: 3023206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3023632:1
position: 3023632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3023206-3023632:1:exon

LOC101980909
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101980909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
pseudo: true
SIO_010081: LOC101980909
subclass of: SO_0000673
so part of: LOC101980909
location: 3023206..3023632
location: region:3023206-3023632:1
so has part: feature:3023206-3023632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3023206-3023632:1:exon

Enc1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Enc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3172329..3184705)
location: region:3172329-3184705:-1
so has part: feature:3172329-3184705:-1:exon
subclass of: SO_0000010

101991943
type: Gene
SIO_000068: ncbigene

position:3172329:-1
position: 3172329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3184705:-1
position: 3184705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3172329-3184705:-1:exon

Enc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enc1
product: ectodermal-neural cortex 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005356444.3
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(join(3172329..3174916,3179154..3180967,3184261..3184705))
location: region:3172329-3184705:-1
so has part: feature:3184261-3184705:-1:exon
so has part: feature:3179154-3180967:-1:exon
so has part: feature:3172329-3174916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3184261-3184705:-1:exon

position:3184261:-1
position: 3184261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3179154-3180967:-1:exon

position:3179154:-1
position: 3179154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3180967:-1
position: 3180967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3172329-3174916:-1:exon

position:3174916:-1
position: 3174916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Enc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enc1
product: ectodermal-neural cortex 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005356446.3
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(join(3172329..3174916,3179154..3180967,3183495..3183759))
location: region:3172329-3183759:-1
so has part: feature:3183495-3183759:-1:exon
so has part: feature:3179154-3180967:-1:exon
so has part: feature:3172329-3174916:-1:exon

position:3183759:-1
position: 3183759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3183495-3183759:-1:exon

position:3183495:-1
position: 3183495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3179154-3180967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172329-3174916:-1:exon

Enc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enc1
product: ectodermal-neural cortex 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005356445.3
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(join(3172329..3174916,3179154..3180967,3182670..3182748))
location: region:3172329-3182748:-1
so has part: feature:3182670-3182748:-1:exon
so has part: feature:3179154-3180967:-1:exon
so has part: feature:3172329-3174916:-1:exon

position:3182748:-1
position: 3182748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3182670-3182748:-1:exon

position:3182670:-1
position: 3182670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3179154-3180967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172329-3174916:-1:exon

Enc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Enc1
product: ectodermal-neural cortex 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_026783726.1
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(join(3172329..3174916,3179154..3180967,3181650..3181703))
location: region:3172329-3181703:-1
so has part: feature:3181650-3181703:-1:exon
so has part: feature:3179154-3180967:-1:exon
so has part: feature:3172329-3174916:-1:exon

position:3181703:-1
position: 3181703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3181650-3181703:-1:exon

position:3181650:-1
position: 3181650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3179154-3180967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172329-3174916:-1:exon

Enc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1
translation: MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRYFEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFLEKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLVYESAMNWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQNDGVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEHYDPTTNKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWTVPATCPQPWRYTAAAVLGNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDPTLDVWNSITTVPYSLIPTAFVSTWKHLPS
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(3179185..3180954)
location: region:3179185-3180954:-1
so has part: feature:3179185-3180954:-1:exon

XP_026639527.1
type: Protein
SIO_000068: ncbiprotein

position:3179185:-1
position: 3179185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3180954:-1
position: 3180954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3179185-3180954:-1:exon

Enc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1
translation: MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRYFEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFLEKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLVYESAMNWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQNDGVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEHYDPTTNKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWTVPATCPQPWRYTAAAVLGNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDPTLDVWNSITTVPYSLIPTAFVSTWKHLPS
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(3179185..3180954)
location: region:3179185-3180954:-1
so has part: feature:3179185-3180954:-1:exon

XP_005356501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3179185-3180954:-1:exon

Enc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1
translation: MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRYFEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFLEKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLVYESAMNWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQNDGVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEHYDPTTNKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWTVPATCPQPWRYTAAAVLGNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDPTLDVWNSITTVPYSLIPTAFVSTWKHLPS
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(3179185..3180954)
location: region:3179185-3180954:-1
so has part: feature:3179185-3180954:-1:exon

XP_005356502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3179185-3180954:-1:exon

Enc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Enc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1
translation: MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRYFEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFLEKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLVYESAMNWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQNDGVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEHYDPTTNKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWTVPATCPQPWRYTAAAVLGNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDPTLDVWNSITTVPYSLIPTAFVSTWKHLPS
SIO_010081: Enc1
subclass of: SO_0000673
so part of: Enc1
location: complement(3179185..3180954)
location: region:3179185-3180954:-1
so has part: feature:3179185-3180954:-1:exon

XP_005356503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3179185-3180954:-1:exon

Hexb
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hexb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3235196..3257749
location: region:3235196-3257749:1
so has part: feature:3235196-3257749:1:exon
subclass of: SO_0000010

101981202
type: Gene
SIO_000068: ncbigene

position:3235196:1
position: 3235196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3257749:1
position: 3257749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3235196-3257749:1:exon

Hexb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hexb
product: hexosaminidase subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783824.1
SIO_010081: Hexb
subclass of: SO_0000673
so part of: Hexb
location: join(3235196..3235576,3238767..3238912,3242752..3242817,3243468..3243514,3243947..3244057,3247389..3247490,3249550..3249679,3251164..3251344,3252152..3252238,3253954..3254089,3256762..3256976,3257102..3257206,3257499..3257749)
location: region:3235196-3257749:1
so has part: feature:3235196-3235576:1:exon
so has part: feature:3238767-3238912:1:exon
so has part: feature:3242752-3242817:1:exon
so has part: feature:3243468-3243514:1:exon
so has part: feature:3243947-3244057:1:exon
so has part: feature:3247389-3247490:1:exon
so has part: feature:3249550-3249679:1:exon
so has part: feature:3251164-3251344:1:exon
so has part: feature:3252152-3252238:1:exon
so has part: feature:3253954-3254089:1:exon
so has part: feature:3256762-3256976:1:exon
so has part: feature:3257102-3257206:1:exon
so has part: feature:3257499-3257749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3235196-3235576:1:exon

position:3235576:1
position: 3235576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3238767-3238912:1:exon

position:3238767:1
position: 3238767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238912:1
position: 3238912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3242752-3242817:1:exon

position:3242752:1
position: 3242752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3242817:1
position: 3242817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3243468-3243514:1:exon

position:3243468:1
position: 3243468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3243514:1
position: 3243514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3243947-3244057:1:exon

position:3243947:1
position: 3243947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3244057:1
position: 3244057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3247389-3247490:1:exon

position:3247389:1
position: 3247389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3247490:1
position: 3247490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3249550-3249679:1:exon

position:3249550:1
position: 3249550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3249679:1
position: 3249679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3251164-3251344:1:exon

position:3251164:1
position: 3251164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3251344:1
position: 3251344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3252152-3252238:1:exon

position:3252152:1
position: 3252152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3252238:1
position: 3252238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3253954-3254089:1:exon

position:3253954:1
position: 3253954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3254089:1
position: 3254089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3256762-3256976:1:exon

position:3256762:1
position: 3256762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3256976:1
position: 3256976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3257102-3257206:1:exon

position:3257102:1
position: 3257102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3257206:1
position: 3257206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3257499-3257749:1:exon

position:3257499:1
position: 3257499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hexb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hexb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-hexosaminidase subunit beta
translation: MRQSPHRAPGLLLALVALAALVAQAPAQQRPALWPFPRSVNMSPQLLNIAEDYFLIVHGRNSTAGPSCSILQEAFRRYYNYIFGFYKRHLRPARFHPGPQLEQLQVTITLEPQCDSFPNMSSDESYSLLVQEPVAYLKANRVWGALRGLETFSQLVYQDCYGALTINESTIIDFPRFAHRGILIDTSRHYLPMKTILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPQLSDKGSYSLRHVYTPSDVDTVLEYARFRGIRVIPEFDTPGHTQSWGKGQKGLLTPCYSQRKQTQRVGPINPTLNETYRFLTTFFKEISSVFPDQFIHLGGDEVDFECWASNPNIQNFMKKKGFGKDFTRLESFYIKKILDIITSLKKGSIVWQEVFDDNVQVRTVKTPLGAECWSQWERLPAIALSQRGNKGSGAYRKGTWDDYREGASVVQLNSFPFNHFNAGSEKEKQLVIGGEACLWGEFVDATNLIPRLWPRASAVGERLWSPQAVTDLEDAYNRLAIHRCRMVSRGIAAQPLFTGHCSLEYRVEA
SIO_010081: Hexb
subclass of: SO_0000673
so part of: Hexb
location: join(3235347..3235576,3238767..3238912,3242752..3242817,3243468..3243514,3243947..3244057,3247389..3247490,3249550..3249679,3251164..3251344,3252152..3252238,3253954..3254089,3256762..3256976,3257102..3257206,3257499..3257565)
location: region:3235347-3257565:1
so has part: feature:3235347-3235576:1:exon
so has part: feature:3238767-3238912:1:exon
so has part: feature:3242752-3242817:1:exon
so has part: feature:3243468-3243514:1:exon
so has part: feature:3243947-3244057:1:exon
so has part: feature:3247389-3247490:1:exon
so has part: feature:3249550-3249679:1:exon
so has part: feature:3251164-3251344:1:exon
so has part: feature:3252152-3252238:1:exon
so has part: feature:3253954-3254089:1:exon
so has part: feature:3256762-3256976:1:exon
so has part: feature:3257102-3257206:1:exon
so has part: feature:3257499-3257565:1:exon

XP_026639625.1
type: Protein
SIO_000068: ncbiprotein

position:3235347:1
position: 3235347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3257565:1
position: 3257565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3235347-3235576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3238767-3238912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242752-3242817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3243468-3243514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3243947-3244057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3247389-3247490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3249550-3249679:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3251164-3251344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3252152-3252238:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3253954-3254089:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3256762-3256976:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3257102-3257206:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3257499-3257565:1:exon

Gfm2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gfm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3254134..3296037)
location: region:3254134-3296037:-1
so has part: feature:3254134-3296037:-1:exon
subclass of: SO_0000010

101992775
type: Gene
SIO_000068: ncbigene

position:3254134:-1
position: 3254134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3296037:-1
position: 3296037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3254134-3296037:-1:exon

Gfm2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Gfm2
product: G elongation factor mitochondrial 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003377788.1
SIO_010081: Gfm2
so part of: Gfm2
location: complement(join(3254134..3254307,3258519..3258712,3259345..3259527,3260044..3260159,3260410..3260589,3262989..3263127,3264899..3264975,3267818..3268004,3270164..3270263,3270349..3270489,3271758..3271906,3272803..3272883,3279223..3279402,3279586..3279646,3281085..3281173,3284209..3284297,3285119..3285244,3288723..3288820,3289842..3289899,3291770..3291854,3292757..3292841,3295963..3296037))
location: region:3254134-3296037:-1
so has part: feature:3295963-3296037:-1:exon
so has part: feature:3292757-3292841:-1:exon
so has part: feature:3291770-3291854:-1:exon
so has part: feature:3289842-3289899:-1:exon
so has part: feature:3288723-3288820:-1:exon
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so has part: feature:3284209-3284297:-1:exon
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so has part: feature:3279223-3279402:-1:exon
so has part: feature:3272803-3272883:-1:exon
so has part: feature:3271758-3271906:-1:exon
so has part: feature:3270349-3270489:-1:exon
so has part: feature:3270164-3270263:-1:exon
so has part: feature:3267818-3268004:-1:exon
so has part: feature:3264899-3264975:-1:exon
so has part: feature:3262989-3263127:-1:exon
so has part: feature:3260410-3260589:-1:exon
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so has part: feature:3259345-3259527:-1:exon
so has part: feature:3258519-3258712:-1:exon
so has part: feature:3254134-3254307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3295963-3296037:-1:exon

position:3295963:-1
position: 3295963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3292757-3292841:-1:exon

position:3292757:-1
position: 3292757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3292841:-1
position: 3292841
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:3291770-3291854:-1:exon

position:3291770:-1
position: 3291770
reference: sequence
type: ReverseStrandPosition
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position:3291854:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:3289842-3289899:-1:exon

position:3289842:-1
position: 3289842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3289899:-1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:3288723-3288820:-1:exon

position:3288723:-1
position: 3288723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3288820:-1
position: 3288820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3285119-3285244:-1:exon

position:3285119:-1
position: 3285119
reference: sequence
type: ReverseStrandPosition
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position:3285244:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:3284209-3284297:-1:exon

position:3284209:-1
position: 3284209
reference: sequence
type: ReverseStrandPosition
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position:3284297:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:3281085-3281173:-1:exon

position:3281085:-1
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reference: sequence
type: ReverseStrandPosition
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position:3281173:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:3279586-3279646:-1:exon

position:3279586:-1
position: 3279586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3279646:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:3279223-3279402:-1:exon

position:3279223:-1
position: 3279223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3279402:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3272803-3272883:-1:exon

position:3272803:-1
position: 3272803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272883:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3271758-3271906:-1:exon

position:3271758:-1
position: 3271758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271906:-1
position: 3271906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3270349-3270489:-1:exon

position:3270349:-1
position: 3270349
reference: sequence
type: ReverseStrandPosition
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position:3270489:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:3270164-3270263:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:3270263:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:3267818-3268004:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:3268004:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:3264899-3264975:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264975:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:3262989-3263127:-1:exon

position:3262989:-1
position: 3262989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263127:-1
position: 3263127
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:3260410-3260589:-1:exon

position:3260410:-1
position: 3260410
reference: sequence
type: ReverseStrandPosition
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position:3260589:-1
position: 3260589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3260044-3260159:-1:exon

position:3260044:-1
position: 3260044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260159:-1
position: 3260159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3259345-3259527:-1:exon

position:3259345:-1
position: 3259345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3259527:-1
position: 3259527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3258519-3258712:-1:exon

position:3258519:-1
position: 3258519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258712:-1
position: 3258712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3254134-3254307:-1:exon

position:3254307:-1
position: 3254307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gfm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gfm2
product: G elongation factor mitochondrial 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005356448.3
SIO_010081: Gfm2
subclass of: SO_0000673
so part of: Gfm2
location: complement(join(3257838..3258712,3259345..3259527,3260044..3260159,3260410..3260589,3262989..3263127,3264899..3264975,3267818..3268004,3270164..3270263,3270349..3270489,3271758..3271906,3272803..3272883,3279223..3279402,3279586..3279646,3281085..3281173,3284209..3284297,3285119..3285244,3288723..3288820,3289842..3289899,3291770..3291854,3292757..3292841,3295963..3296037))
location: region:3257838-3296037:-1
so has part: feature:3295963-3296037:-1:exon
so has part: feature:3292757-3292841:-1:exon
so has part: feature:3291770-3291854:-1:exon
so has part: feature:3289842-3289899:-1:exon
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so has part: feature:3271758-3271906:-1:exon
so has part: feature:3270349-3270489:-1:exon
so has part: feature:3270164-3270263:-1:exon
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so has part: feature:3264899-3264975:-1:exon
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so has part: feature:3259345-3259527:-1:exon
so has part: feature:3257838-3258712:-1:exon

position:3257838:-1
position: 3257838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295963-3296037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3292757-3292841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3291770-3291854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3289842-3289899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3288723-3288820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3285119-3285244:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3284209-3284297:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3281085-3281173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3279586-3279646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3279223-3279402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3272803-3272883:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3271758-3271906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3270349-3270489:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3270164-3270263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3267818-3268004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3264899-3264975:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3262989-3263127:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3260410-3260589:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3260044-3260159:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3259345-3259527:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3257838-3258712:-1:exon

Gfm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gfm2
product: G elongation factor mitochondrial 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026783803.1
SIO_010081: Gfm2
subclass of: SO_0000673
so part of: Gfm2
location: complement(join(3257838..3258712,3259345..3259527,3260044..3260159,3260410..3260589,3262989..3263127,3264899..3264975,3267818..3268004,3270164..3270263,3270349..3270489,3271758..3271906,3272803..3272883,3279223..3279402,3279586..3279646,3281085..3281173,3284209..3284297,3285119..3285244,3288723..3288820,3289749..3289777))
location: region:3257838-3289777:-1
so has part: feature:3289749-3289777:-1:exon
so has part: feature:3288723-3288820:-1:exon
so has part: feature:3285119-3285244:-1:exon
so has part: feature:3284209-3284297:-1:exon
so has part: feature:3281085-3281173:-1:exon
so has part: feature:3279586-3279646:-1:exon
so has part: feature:3279223-3279402:-1:exon
so has part: feature:3272803-3272883:-1:exon
so has part: feature:3271758-3271906:-1:exon
so has part: feature:3270349-3270489:-1:exon
so has part: feature:3270164-3270263:-1:exon
so has part: feature:3267818-3268004:-1:exon
so has part: feature:3264899-3264975:-1:exon
so has part: feature:3262989-3263127:-1:exon
so has part: feature:3260410-3260589:-1:exon
so has part: feature:3260044-3260159:-1:exon
so has part: feature:3259345-3259527:-1:exon
so has part: feature:3257838-3258712:-1:exon

position:3289777:-1
position: 3289777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3289749-3289777:-1:exon

position:3289749:-1
position: 3289749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3288723-3288820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3285119-3285244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3284209-3284297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3281085-3281173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3279586-3279646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279223-3279402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3272803-3272883:-1:exon

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SIO_000300: 9
SIO_000628: feature:3271758-3271906:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3270349-3270489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3270164-3270263:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3267818-3268004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3264899-3264975:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3262989-3263127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3260410-3260589:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3260044-3260159:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3259345-3259527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3257838-3258712:-1:exon

Gfm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gfm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-releasing factor 2, mitochondrial isoform X1
translation: MFAVNNRKVFSVPLNTMCYCKIKAILKRSKTRVPLRRNYSSPAGVIGNDVKSLHSIISPPVAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWKQADKHKIPRICFLNKMDKTGASFNYAVESIREKLKAKPLILQLPIGEARTFQGVVDVVNKEKLLWNSNSGDGKDFERKPLLETSDPELLKETIEARNSLIEQVADLDDEFADLVLGEFSDNFDLVPAEKLQTAIHRVTLARAAVPVLCGSALKNKGVQPLLDAITMYLPSPEEREYGFLQWYKGDLCALAFKVLHDKQRGPLVFLRIYSGTLKPQLAIHNINRNCTERMSRLLLPFADQHVEIPSLTAGNIALTVGLKQTATGDTIVSSKSSALAAARRAGRGEKKPGENNEAESLLLAGVEIPEPVFFCTIEPPSVAKQPDLDHALDRLQREDPSLKVRIDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYRETILNSVRATDILDRTLGDKRHFVRADLEARPGEAPSSRAVIEYADCVSEDLVQASREAIENAVHSACLQGPLLGSPVQDVAITLHSLMIHPGTSTAMVNACVSRCVQKALKKAEKQVLEPLMSLEVTVTGDYLSPVLADLAQRRGNIQEIQTRQDSKVVIGFVPLAEMMGYSTVLRTLTSGSATFALEFSTYQAMSPQDQTALLNQRSGLAQVL
SIO_010081: Gfm2
subclass of: SO_0000673
so part of: Gfm2
location: complement(join(3258575..3258712,3259345..3259527,3260044..3260159,3260410..3260589,3262989..3263127,3264899..3264975,3267818..3268004,3270164..3270263,3270349..3270489,3271758..3271906,3272803..3272883,3279223..3279402,3279586..3279646,3281085..3281173,3284209..3284297,3285119..3285244,3288723..3288820,3289842..3289899,3291770..3291854,3292757..3292801))
location: region:3258575-3292801:-1
so has part: feature:3292757-3292801:-1:exon
so has part: feature:3291770-3291854:-1:exon
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so has part: feature:3288723-3288820:-1:exon
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so has part: feature:3271758-3271906:-1:exon
so has part: feature:3270349-3270489:-1:exon
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so has part: feature:3260044-3260159:-1:exon
so has part: feature:3259345-3259527:-1:exon
so has part: feature:3258575-3258712:-1:exon

XP_005356505.1
type: Protein
SIO_000068: ncbiprotein

position:3258575:-1
position: 3258575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3292801:-1
position: 3292801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3292757-3292801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3291770-3291854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3289842-3289899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3288723-3288820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3285119-3285244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3284209-3284297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3281085-3281173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3279586-3279646:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3279223-3279402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3272803-3272883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3271758-3271906:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3270349-3270489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3270164-3270263:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3267818-3268004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3264899-3264975:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3262989-3263127:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3260410-3260589:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3260044-3260159:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3259345-3259527:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3258575-3258712:-1:exon

Gfm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gfm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-releasing factor 2, mitochondrial isoform X2
translation: MAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWKQADKHKIPRICFLNKMDKTGASFNYAVESIREKLKAKPLILQLPIGEARTFQGVVDVVNKEKLLWNSNSGDGKDFERKPLLETSDPELLKETIEARNSLIEQVADLDDEFADLVLGEFSDNFDLVPAEKLQTAIHRVTLARAAVPVLCGSALKNKGVQPLLDAITMYLPSPEEREYGFLQWYKGDLCALAFKVLHDKQRGPLVFLRIYSGTLKPQLAIHNINRNCTERMSRLLLPFADQHVEIPSLTAGNIALTVGLKQTATGDTIVSSKSSALAAARRAGRGEKKPGENNEAESLLLAGVEIPEPVFFCTIEPPSVAKQPDLDHALDRLQREDPSLKVRIDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYRETILNSVRATDILDRTLGDKRHFVRADLEARPGEAPSSRAVIEYADCVSEDLVQASREAIENAVHSACLQGPLLGSPVQDVAITLHSLMIHPGTSTAMVNACVSRCVQKALKKAEKQVLEPLMSLEVTVTGDYLSPVLADLAQRRGNIQEIQTRQDSKVVIGFVPLAEMMGYSTVLRTLTSGSATFALEFSTYQAMSPQDQTALLNQRSGLAQVL
SIO_010081: Gfm2
subclass of: SO_0000673
so part of: Gfm2
location: complement(join(3258575..3258712,3259345..3259527,3260044..3260159,3260410..3260589,3262989..3263127,3264899..3264975,3267818..3268004,3270164..3270263,3270349..3270489,3271758..3271906,3272803..3272883,3279223..3279402,3279586..3279646,3281085..3281173,3284209..3284297,3285119..3285244,3288723..3288801))
location: region:3258575-3288801:-1
so has part: feature:3288723-3288801:-1:exon
so has part: feature:3285119-3285244:-1:exon
so has part: feature:3284209-3284297:-1:exon
so has part: feature:3281085-3281173:-1:exon
so has part: feature:3279586-3279646:-1:exon
so has part: feature:3279223-3279402:-1:exon
so has part: feature:3272803-3272883:-1:exon
so has part: feature:3271758-3271906:-1:exon
so has part: feature:3270349-3270489:-1:exon
so has part: feature:3270164-3270263:-1:exon
so has part: feature:3267818-3268004:-1:exon
so has part: feature:3264899-3264975:-1:exon
so has part: feature:3262989-3263127:-1:exon
so has part: feature:3260410-3260589:-1:exon
so has part: feature:3260044-3260159:-1:exon
so has part: feature:3259345-3259527:-1:exon
so has part: feature:3258575-3258712:-1:exon

XP_026639604.1
type: Protein
SIO_000068: ncbiprotein

position:3288801:-1
position: 3288801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3288723-3288801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3285119-3285244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3284209-3284297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3281085-3281173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3279586-3279646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3279223-3279402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3272803-3272883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271758-3271906:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3270349-3270489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3270164-3270263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3267818-3268004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3264899-3264975:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3262989-3263127:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3260410-3260589:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3260044-3260159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3259345-3259527:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3258575-3258712:-1:exon

Nsa2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Nsa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3296068..3303129
location: region:3296068-3303129:1
so has part: feature:3296068-3303129:1:exon
subclass of: SO_0000010

101993057
type: Gene
SIO_000068: ncbigene

position:3296068:1
position: 3296068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303129:1
position: 3303129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3296068-3303129:1:exon

Nsa2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nsa2
product: NSA2, ribosome biogenesis homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005356449.2
SIO_010081: Nsa2
subclass of: SO_0000673
so part of: Nsa2
location: join(3296068..3296255,3297714..3297901,3297990..3298140,3299978..3300156,3302095..3302288,3302923..3303129)
location: region:3296068-3303129:1
so has part: feature:3296068-3296255:1:exon
so has part: feature:3297714-3297901:1:exon
so has part: feature:3297990-3298140:1:exon
so has part: feature:3299978-3300156:1:exon
so has part: feature:3302095-3302288:1:exon
so has part: feature:3302923-3303129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3296068-3296255:1:exon

position:3296255:1
position: 3296255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3297714-3297901:1:exon

position:3297714:1
position: 3297714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3297901:1
position: 3297901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3297990-3298140:1:exon

position:3297990:1
position: 3297990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298140:1
position: 3298140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3299978-3300156:1:exon

position:3299978:1
position: 3299978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300156:1
position: 3300156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3302095-3302288:1:exon

position:3302095:1
position: 3302095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302288:1
position: 3302288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3302923-3303129:1:exon

position:3302923:1
position: 3302923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nsa2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nsa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NSA2 homolog
translation: MPQNEHIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV
SIO_010081: Nsa2
subclass of: SO_0000673
so part of: Nsa2
location: join(3296253..3296255,3297714..3297901,3297990..3298140,3299978..3300156,3302095..3302288,3302923..3302990)
location: region:3296253-3302990:1
so has part: feature:3296253-3296255:1:exon
so has part: feature:3297714-3297901:1:exon
so has part: feature:3297990-3298140:1:exon
so has part: feature:3299978-3300156:1:exon
so has part: feature:3302095-3302288:1:exon
so has part: feature:3302923-3302990:1:exon

XP_005356506.1
type: Protein
SIO_000068: ncbiprotein

position:3296253:1
position: 3296253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302990:1
position: 3302990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3296253-3296255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3297714-3297901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3297990-3298140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3299978-3300156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3302095-3302288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302923-3302990:1:exon

Fam169a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fam169a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3303957..3370705)
location: region:3303957-3370705:-1
so has part: feature:3303957-3370705:-1:exon
subclass of: SO_0000010

101993335
type: Gene
SIO_000068: ncbigene

position:3303957:-1
position: 3303957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370705:-1
position: 3370705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3303957-3370705:-1:exon

Fam169a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fam169a
product: family with sequence similarity 169 member A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005356450.2
SIO_010081: Fam169a
subclass of: SO_0000673
so part of: Fam169a
location: complement(join(3303957..3307597,3308682..3308879,3312187..3312343,3315883..3316033,3317381..3317420,3320098..3320204,3321005..3321133,3327736..3327915,3336494..3336665,3340359..3340444,3340847..3340946,3342633..3342767,3370582..3370705))
location: region:3303957-3370705:-1
so has part: feature:3370582-3370705:-1:exon
so has part: feature:3342633-3342767:-1:exon
so has part: feature:3340847-3340946:-1:exon
so has part: feature:3340359-3340444:-1:exon
so has part: feature:3336494-3336665:-1:exon
so has part: feature:3327736-3327915:-1:exon
so has part: feature:3321005-3321133:-1:exon
so has part: feature:3320098-3320204:-1:exon
so has part: feature:3317381-3317420:-1:exon
so has part: feature:3315883-3316033:-1:exon
so has part: feature:3312187-3312343:-1:exon
so has part: feature:3308682-3308879:-1:exon
so has part: feature:3303957-3307597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3370582-3370705:-1:exon

position:3370582:-1
position: 3370582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3342633-3342767:-1:exon

position:3342633:-1
position: 3342633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3342767:-1
position: 3342767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3340847-3340946:-1:exon

position:3340847:-1
position: 3340847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3340946:-1
position: 3340946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3340359-3340444:-1:exon

position:3340359:-1
position: 3340359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3340444:-1
position: 3340444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3336494-3336665:-1:exon

position:3336494:-1
position: 3336494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3336665:-1
position: 3336665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3327736-3327915:-1:exon

position:3327736:-1
position: 3327736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327915:-1
position: 3327915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3321005-3321133:-1:exon

position:3321005:-1
position: 3321005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321133:-1
position: 3321133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3320098-3320204:-1:exon

position:3320098:-1
position: 3320098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3320204:-1
position: 3320204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3317381-3317420:-1:exon

position:3317381:-1
position: 3317381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3317420:-1
position: 3317420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3315883-3316033:-1:exon

position:3315883:-1
position: 3315883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3316033:-1
position: 3316033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3312187-3312343:-1:exon

position:3312187:-1
position: 3312187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312343:-1
position: 3312343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3308682-3308879:-1:exon

position:3308682:-1
position: 3308682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3308879:-1
position: 3308879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3303957-3307597:-1:exon

position:3307597:-1
position: 3307597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fam169a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fam169a
product: family with sequence similarity 169 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026783732.1
SIO_010081: Fam169a
subclass of: SO_0000673
so part of: Fam169a
location: complement(join(3303957..3307597,3308682..3308879,3312187..3312343,3315883..3316033,3317381..3317420,3320098..3320204,3321005..3321133,3336494..3336665,3340359..3340444,3340847..3340946,3342633..3342767,3369989..3370555))
location: region:3303957-3370555:-1
so has part: feature:3369989-3370555:-1:exon
so has part: feature:3342633-3342767:-1:exon
so has part: feature:3340847-3340946:-1:exon
so has part: feature:3340359-3340444:-1:exon
so has part: feature:3336494-3336665:-1:exon
so has part: feature:3321005-3321133:-1:exon
so has part: feature:3320098-3320204:-1:exon
so has part: feature:3317381-3317420:-1:exon
so has part: feature:3315883-3316033:-1:exon
so has part: feature:3312187-3312343:-1:exon
so has part: feature:3308682-3308879:-1:exon
so has part: feature:3303957-3307597:-1:exon

position:3370555:-1
position: 3370555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369989-3370555:-1:exon

position:3369989:-1
position: 3369989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3342633-3342767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3340847-3340946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3340359-3340444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3336494-3336665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3321005-3321133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3320098-3320204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3317381-3317420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315883-3316033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3312187-3312343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308682-3308879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3303957-3307597:-1:exon

Fam169a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fam169a
product: family with sequence similarity 169 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026783731.1
SIO_010081: Fam169a
subclass of: SO_0000673
so part of: Fam169a
location: complement(join(3303957..3307597,3308682..3308879,3312187..3312343,3315883..3316033,3317381..3317420,3320098..3320204,3321005..3321133,3327736..3327915,3336494..3336665,3340359..3340444,3340847..3340946,3342633..3342767,3369989..3370554))
location: region:3303957-3370554:-1
so has part: feature:3369989-3370554:-1:exon
so has part: feature:3342633-3342767:-1:exon
so has part: feature:3340847-3340946:-1:exon
so has part: feature:3340359-3340444:-1:exon
so has part: feature:3336494-3336665:-1:exon
so has part: feature:3327736-3327915:-1:exon
so has part: feature:3321005-3321133:-1:exon
so has part: feature:3320098-3320204:-1:exon
so has part: feature:3317381-3317420:-1:exon
so has part: feature:3315883-3316033:-1:exon
so has part: feature:3312187-3312343:-1:exon
so has part: feature:3308682-3308879:-1:exon
so has part: feature:3303957-3307597:-1:exon

position:3370554:-1
position: 3370554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369989-3370554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3342633-3342767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3340847-3340946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3340359-3340444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3336494-3336665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3327736-3327915:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3321005-3321133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3320098-3320204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3317381-3317420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3315883-3316033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312187-3312343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308682-3308879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3303957-3307597:-1:exon

Fam169a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fam169a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble lamin-associated protein of 75 kDa isoform X2
translation: MPRSLARSLSRLPSRGRGGGGGGSRAAPSRLPTWSPGRSRDSGTRAGWGRGRELRGAAQVAPSRPAAPGLGGTVWRLGPPRIRVIVVLGQGSPPSIMQVLERPVPAEMARMEPRVRGGVWLGDLDRVYYDHGAWERMMKRVPSLLEIYAGFLSKVDLKRMAFPVDLLDNCTHEELENSAEDYLSNLRCADPENPEWFSILNITIPISLSNVGFVPLYGGNQAQKILALFAPEDSLTAVALYLVDQWWAIDDIVRTSAPSREGLKQVSTLGERVVLYVLNRVIYRKQEMERNEIPFLCHSSTDYAKILWKKGEAVGFYSVKPTASKQYFEKYPGDHELLWEVEGVGHWHQRTPVTRALQREAVKVAEISQYEAKRPVSGEYGLAAVPEYEPGMEDSQSSEMQIHSLKDAFASTSEGPEKTPVSTRTRSSHLKRPKIGKRFQDSEFSSSQGEDENTAQTSAVASVNKIEYSARTSESSEEFLEEEPEQRGVEFEEESSDKDAQPGLDTQPRLEKQDGDKDSTLEPVNGEVVDDALKTSLVIEEDSTSEGLEEEVKVPSLNSREETVNTVPVVADSPKTSEAAPDKTSPVSDSEMLTDQGPSDDKGHTEEKLVSKKKTHLGSSDSVATLSNEEKSDSGFPNSAVTDFPEEPVSENLSSNTTSSLEDQGEDGVPEAQETSTAQIEVELEDVPFPQNAGQKNQSEEQSEASSEQLDQFTQSAEKAVDSSSEEIEVEVPVVDRRNLRRKAKGHKGPAKKKAKLS
SIO_010081: Fam169a
subclass of: SO_0000673
so part of: Fam169a
location: complement(join(3307070..3307597,3308682..3308879,3312187..3312343,3315883..3316033,3317381..3317420,3320098..3320204,3321005..3321133,3336494..3336665,3340359..3340444,3340847..3340946,3342633..3342767,3369989..3370462))
location: region:3307070-3370462:-1
so has part: feature:3369989-3370462:-1:exon
so has part: feature:3342633-3342767:-1:exon
so has part: feature:3340847-3340946:-1:exon
so has part: feature:3340359-3340444:-1:exon
so has part: feature:3336494-3336665:-1:exon
so has part: feature:3321005-3321133:-1:exon
so has part: feature:3320098-3320204:-1:exon
so has part: feature:3317381-3317420:-1:exon
so has part: feature:3315883-3316033:-1:exon
so has part: feature:3312187-3312343:-1:exon
so has part: feature:3308682-3308879:-1:exon
so has part: feature:3307070-3307597:-1:exon

XP_026639533.1
type: Protein
SIO_000068: ncbiprotein

position:3307070:-1
position: 3307070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370462:-1
position: 3370462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369989-3370462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3342633-3342767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3340847-3340946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3340359-3340444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3336494-3336665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3321005-3321133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3320098-3320204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3317381-3317420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315883-3316033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3312187-3312343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308682-3308879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3307070-3307597:-1:exon

Fam169a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fam169a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble lamin-associated protein of 75 kDa isoform X1
translation: MPRSLARSLSRLPSRGRGGGGGGSRAAPSRLPTWSPGRSRDSGTRAGWGRGRELRGAAQVAPSRPAAPGLGGTVWRLGPPRIRVIVVLGQGSPPSIMQVLERPVPAEMARMEPRVRGGVWLGDLDRVYYDHGAWERMMKRVPSLLEIYAGFLSKVDLKRMAFPVDLLDNCTHEELENSAEDYLSNLRCADPENPEWFSILNITIPISLSNVGFVPLYGGNQAQKILALFAPEDSLTAVALYLVDQWWAIDDIVRTSAPSREGLKQVSTLGERVVLYVLNRVIYRKQEMERNEIPFLCHSSTDYAKILWKKGEAVGFYSVKPTGSLCASFLTQSYQLPVLDTMFIRKKYRGKDLGLHMLEDFVDSFTEEALGLRYPLSSLMYTASKQYFEKYPGDHELLWEVEGVGHWHQRTPVTRALQREAVKVAEISQYEAKRPVSGEYGLAAVPEYEPGMEDSQSSEMQIHSLKDAFASTSEGPEKTPVSTRTRSSHLKRPKIGKRFQDSEFSSSQGEDENTAQTSAVASVNKIEYSARTSESSEEFLEEEPEQRGVEFEEESSDKDAQPGLDTQPRLEKQDGDKDSTLEPVNGEVVDDALKTSLVIEEDSTSEGLEEEVKVPSLNSREETVNTVPVVADSPKTSEAAPDKTSPVSDSEMLTDQGPSDDKGHTEEKLVSKKKTHLGSSDSVATLSNEEKSDSGFPNSAVTDFPEEPVSENLSSNTTSSLEDQGEDGVPEAQETSTAQIEVELEDVPFPQNAGQKNQSEEQSEASSEQLDQFTQSAEKAVDSSSEEIEVEVPVVDRRNLRRKAKGHKGPAKKKAKLS
SIO_010081: Fam169a
subclass of: SO_0000673
so part of: Fam169a
location: complement(join(3307070..3307597,3308682..3308879,3312187..3312343,3315883..3316033,3317381..3317420,3320098..3320204,3321005..3321133,3327736..3327915,3336494..3336665,3340359..3340444,3340847..3340946,3342633..3342767,3369989..3370462))
location: region:3307070-3370462:-1
so has part: feature:3369989-3370462:-1:exon
so has part: feature:3342633-3342767:-1:exon
so has part: feature:3340847-3340946:-1:exon
so has part: feature:3340359-3340444:-1:exon
so has part: feature:3336494-3336665:-1:exon
so has part: feature:3327736-3327915:-1:exon
so has part: feature:3321005-3321133:-1:exon
so has part: feature:3320098-3320204:-1:exon
so has part: feature:3317381-3317420:-1:exon
so has part: feature:3315883-3316033:-1:exon
so has part: feature:3312187-3312343:-1:exon
so has part: feature:3308682-3308879:-1:exon
so has part: feature:3307070-3307597:-1:exon

XP_026639532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3369989-3370462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3342633-3342767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3340847-3340946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3340359-3340444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3336494-3336665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3327736-3327915:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3321005-3321133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3320098-3320204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3317381-3317420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3315883-3316033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312187-3312343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308682-3308879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3307070-3307597:-1:exon

Fam169a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fam169a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble lamin-associated protein of 75 kDa isoform X3
translation: MAFPVDLLDNCTHEELENSAEDYLSNLRCADPENPEWFSILNITIPISLSNVGFVPLYGGNQAQKILALFAPEDSLTAVALYLVDQWWAIDDIVRTSAPSREGLKQVSTLGERVVLYVLNRVIYRKQEMERNEIPFLCHSSTDYAKILWKKGEAVGFYSVKPTGSLCASFLTQSYQLPVLDTMFIRKKYRGKDLGLHMLEDFVDSFTEEALGLRYPLSSLMYTASKQYFEKYPGDHELLWEVEGVGHWHQRTPVTRALQREAVKVAEISQYEAKRPVSGEYGLAAVPEYEPGMEDSQSSEMQIHSLKDAFASTSEGPEKTPVSTRTRSSHLKRPKIGKRFQDSEFSSSQGEDENTAQTSAVASVNKIEYSARTSESSEEFLEEEPEQRGVEFEEESSDKDAQPGLDTQPRLEKQDGDKDSTLEPVNGEVVDDALKTSLVIEEDSTSEGLEEEVKVPSLNSREETVNTVPVVADSPKTSEAAPDKTSPVSDSEMLTDQGPSDDKGHTEEKLVSKKKTHLGSSDSVATLSNEEKSDSGFPNSAVTDFPEEPVSENLSSNTTSSLEDQGEDGVPEAQETSTAQIEVELEDVPFPQNAGQKNQSEEQSEASSEQLDQFTQSAEKAVDSSSEEIEVEVPVVDRRNLRRKAKGHKGPAKKKAKLS
SIO_010081: Fam169a
subclass of: SO_0000673
so part of: Fam169a
location: complement(join(3307070..3307597,3308682..3308879,3312187..3312343,3315883..3316033,3317381..3317420,3320098..3320204,3321005..3321133,3327736..3327915,3336494..3336665,3340359..3340444,3340847..3340946,3342633..3342764))
location: region:3307070-3342764:-1
so has part: feature:3342633-3342764:-1:exon
so has part: feature:3340847-3340946:-1:exon
so has part: feature:3340359-3340444:-1:exon
so has part: feature:3336494-3336665:-1:exon
so has part: feature:3327736-3327915:-1:exon
so has part: feature:3321005-3321133:-1:exon
so has part: feature:3320098-3320204:-1:exon
so has part: feature:3317381-3317420:-1:exon
so has part: feature:3315883-3316033:-1:exon
so has part: feature:3312187-3312343:-1:exon
so has part: feature:3308682-3308879:-1:exon
so has part: feature:3307070-3307597:-1:exon

XP_005356507.1
type: Protein
SIO_000068: ncbiprotein

position:3342764:-1
position: 3342764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3342633-3342764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3340847-3340946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3340359-3340444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3336494-3336665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3327736-3327915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3321005-3321133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3320098-3320204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3317381-3317420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315883-3316033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3312187-3312343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308682-3308879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3307070-3307597:-1:exon

Gcnt4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gcnt4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3476131..3505257)
location: region:3476131-3505257:-1
so has part: feature:3476131-3505257:-1:exon
subclass of: SO_0000010

101993631
type: Gene
SIO_000068: ncbigene

position:3476131:-1
position: 3476131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3505257:-1
position: 3505257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3476131-3505257:-1:exon

Gcnt4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gcnt4
product: glucosaminyl (N-acetyl) transferase 4, core 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783686.1
SIO_010081: Gcnt4
subclass of: SO_0000673
so part of: Gcnt4
location: complement(join(3476131..3478706,3489120..3489236,3505088..3505257))
location: region:3476131-3505257:-1
so has part: feature:3505088-3505257:-1:exon
so has part: feature:3489120-3489236:-1:exon
so has part: feature:3476131-3478706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3505088-3505257:-1:exon

position:3505088:-1
position: 3505088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3489120-3489236:-1:exon

position:3489120:-1
position: 3489120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3489236:-1
position: 3489236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3476131-3478706:-1:exon

position:3478706:-1
position: 3478706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gcnt4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gcnt4
product: glucosaminyl (N-acetyl) transferase 4, core 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005356451.3
SIO_010081: Gcnt4
subclass of: SO_0000673
so part of: Gcnt4
location: complement(join(3476131..3478706,3489120..3489236,3501561..3501649))
location: region:3476131-3501649:-1
so has part: feature:3501561-3501649:-1:exon
so has part: feature:3489120-3489236:-1:exon
so has part: feature:3476131-3478706:-1:exon

position:3501649:-1
position: 3501649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501561-3501649:-1:exon

position:3501561:-1
position: 3501561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3489120-3489236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476131-3478706:-1:exon

Gcnt4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gcnt4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
translation: MKIFRCCSKYTLQQKLFVLFLALWLLSLLKLLNVGRLLFPQRDIYLVEYSLSTSPFVRNRFPPIQDEVRYEVNCSGIYEQEPLEIGKSLEIRRQNIIDLEDGDVVAMTSDCDIYQTLRRYHEKLVSREEKSFPIAYSLVVHKDAIMVERLIHAIYNKHNLYCIHYDLKSPNEFKTAMNNLAKCFSNIFIASRLEAVEYAHISRLQADLNCLSDLLKSSVQWKYVINLCGQDFPLKSNFELVSELKKLQGQNMLETVKPPTGKMERFTYHHELRSVPYEYMKLPVRTNISKEAPPHNIEVFVGSAYFVLSQAFVKYIFNSSLVEDFFAWSKDTYSPDEHFWATLTRIPGIPGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPNCTGSHLRSVCIYGAAELRWLIKEGHWFANKFDSKVDPVLVKCLAEKLEEQQRKLIILSSQKFITGRKPIVTRHRKSTMELGMSNTKS
SIO_010081: Gcnt4
subclass of: SO_0000673
so part of: Gcnt4
location: complement(3477296..3478705)
location: region:3477296-3478705:-1
so has part: feature:3477296-3478705:-1:exon

XP_026639487.1
type: Protein
SIO_000068: ncbiprotein

position:3477296:-1
position: 3477296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478705:-1
position: 3478705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3477296-3478705:-1:exon

Gcnt4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gcnt4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
translation: MKIFRCCSKYTLQQKLFVLFLALWLLSLLKLLNVGRLLFPQRDIYLVEYSLSTSPFVRNRFPPIQDEVRYEVNCSGIYEQEPLEIGKSLEIRRQNIIDLEDGDVVAMTSDCDIYQTLRRYHEKLVSREEKSFPIAYSLVVHKDAIMVERLIHAIYNKHNLYCIHYDLKSPNEFKTAMNNLAKCFSNIFIASRLEAVEYAHISRLQADLNCLSDLLKSSVQWKYVINLCGQDFPLKSNFELVSELKKLQGQNMLETVKPPTGKMERFTYHHELRSVPYEYMKLPVRTNISKEAPPHNIEVFVGSAYFVLSQAFVKYIFNSSLVEDFFAWSKDTYSPDEHFWATLTRIPGIPGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPNCTGSHLRSVCIYGAAELRWLIKEGHWFANKFDSKVDPVLVKCLAEKLEEQQRKLIILSSQKFITGRKPIVTRHRKSTMELGMSNTKS
SIO_010081: Gcnt4
subclass of: SO_0000673
so part of: Gcnt4
location: complement(3477296..3478705)
location: region:3477296-3478705:-1
so has part: feature:3477296-3478705:-1:exon

XP_005356508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3477296-3478705:-1:exon

Ankrd31
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ankrd31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3520731..3676353)
location: region:3520731-3676353:-1
so has part: feature:3520731-3676353:-1:exon
subclass of: SO_0000010

101981464
type: Gene
SIO_000068: ncbigene

position:3520731:-1
position: 3520731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676353:-1
position: 3676353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3520731-3676353:-1:exon

Ankrd31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ankrd31
product: ankyrin repeat domain 31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783825.1
SIO_010081: Ankrd31
subclass of: SO_0000673
so part of: Ankrd31
location: complement(join(3520731..3520892,3537477..3537579,3543822..3543962,3552270..3553185,3560459..3560555,3563787..3563874,3565853..3565968,3568621..3568783,3578181..3578323,3579111..3579254,3586730..3586900,3587431..3588904,3589442..3589494,3589765..3589909,3593594..3593736,3601900..3602055,3610035..3610141,3610638..3610915,3613316..3613903,3618835..3618878,3628139..3628209,3650376..3650416,3660096..3660211,3666374..3666447,3676087..3676353))
location: region:3520731-3676353:-1
so has part: feature:3676087-3676353:-1:exon
so has part: feature:3666374-3666447:-1:exon
so has part: feature:3660096-3660211:-1:exon
so has part: feature:3650376-3650416:-1:exon
so has part: feature:3628139-3628209:-1:exon
so has part: feature:3618835-3618878:-1:exon
so has part: feature:3613316-3613903:-1:exon
so has part: feature:3610638-3610915:-1:exon
so has part: feature:3610035-3610141:-1:exon
so has part: feature:3601900-3602055:-1:exon
so has part: feature:3593594-3593736:-1:exon
so has part: feature:3589765-3589909:-1:exon
so has part: feature:3589442-3589494:-1:exon
so has part: feature:3587431-3588904:-1:exon
so has part: feature:3586730-3586900:-1:exon
so has part: feature:3579111-3579254:-1:exon
so has part: feature:3578181-3578323:-1:exon
so has part: feature:3568621-3568783:-1:exon
so has part: feature:3565853-3565968:-1:exon
so has part: feature:3563787-3563874:-1:exon
so has part: feature:3560459-3560555:-1:exon
so has part: feature:3552270-3553185:-1:exon
so has part: feature:3543822-3543962:-1:exon
so has part: feature:3537477-3537579:-1:exon
so has part: feature:3520731-3520892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3676087-3676353:-1:exon

position:3676087:-1
position: 3676087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3666374-3666447:-1:exon

position:3666374:-1
position: 3666374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3666447:-1
position: 3666447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3660096-3660211:-1:exon

position:3660096:-1
position: 3660096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660211:-1
position: 3660211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3650376-3650416:-1:exon

position:3650376:-1
position: 3650376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3650416:-1
position: 3650416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3628139-3628209:-1:exon

position:3628139:-1
position: 3628139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3628209:-1
position: 3628209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3618835-3618878:-1:exon

position:3618835:-1
position: 3618835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3618878:-1
position: 3618878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3613316-3613903:-1:exon

position:3613316:-1
position: 3613316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3613903:-1
position: 3613903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3610638-3610915:-1:exon

position:3610638:-1
position: 3610638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3610915:-1
position: 3610915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3610035-3610141:-1:exon

position:3610035:-1
position: 3610035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3610141:-1
position: 3610141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3601900-3602055:-1:exon

position:3601900:-1
position: 3601900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602055:-1
position: 3602055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3593594-3593736:-1:exon

position:3593594:-1
position: 3593594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3593736:-1
position: 3593736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3589765-3589909:-1:exon

position:3589765:-1
position: 3589765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3589909:-1
position: 3589909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3589442-3589494:-1:exon

position:3589442:-1
position: 3589442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3589494:-1
position: 3589494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3587431-3588904:-1:exon

position:3587431:-1
position: 3587431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3588904:-1
position: 3588904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3586730-3586900:-1:exon

position:3586730:-1
position: 3586730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3586900:-1
position: 3586900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3579111-3579254:-1:exon

position:3579111:-1
position: 3579111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3579254:-1
position: 3579254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3578181-3578323:-1:exon

position:3578181:-1
position: 3578181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3578323:-1
position: 3578323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3568621-3568783:-1:exon

position:3568621:-1
position: 3568621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3568783:-1
position: 3568783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3565853-3565968:-1:exon

position:3565853:-1
position: 3565853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3565968:-1
position: 3565968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3563787-3563874:-1:exon

position:3563787:-1
position: 3563787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3563874:-1
position: 3563874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3560459-3560555:-1:exon

position:3560459:-1
position: 3560459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3560555:-1
position: 3560555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3552270-3553185:-1:exon

position:3552270:-1
position: 3552270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3553185:-1
position: 3553185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3543822-3543962:-1:exon

position:3543822:-1
position: 3543822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543962:-1
position: 3543962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3537477-3537579:-1:exon

position:3537477:-1
position: 3537477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3537579:-1
position: 3537579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3520731-3520892:-1:exon

position:3520892:-1
position: 3520892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ankrd31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ankrd31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ankyrin repeat domain-containing protein 31
translation: MEKGAQASECDSDETVIEGSVTENELEDEELPWRRLLLNRDPSFKSEFCLHSGENGMWKGMPSPEIQLGLKFLSRKDSEEQKNKNKVMPTLSEDLVLQDPQDEATQNQILLQEEFPAFSLPSPHPEFSWSHQKTGGPEAENGEYLPHPGKELSENTDSPEISLLSGTSLMASDLVTPKEKSFAKPVKTLAVPNTFFEPEQEVTLTMTSKETKDEESSLETFVSALERLLESPEGTQEETLLEIANDFNPQELKNPLSNSLSSVSVPLNDLSACCRDVLENTKNGDALPAELLATINMLPGDNVEPGPVGPICQGQEKSSSVSGGNGCLEVQPTMSQIDEDCTQIVQTIEDPKPFKLQTRTHENTTSYEQLNDKGNSDTVKNTSVQETPHVLRRSSRLEKLKASRDVAHTDVLKMPESISSKPLSCEDQIHNIFATENFRMQGSVLKTDSKRKNMHLSRFKSEQRKNNEQLKIKNGKGKMNKMCPCSINRRNVFGENLLYKATLHNDVDLVRSCIKNGGNVNQPNYAGWTALHEASVGGYYQTVSALLEGGAEVNVKGKYQITPLHDAVMNGHYQVAELLLLNGADPLLKSDRGTCALDEAKDSFMENLLRKYIPKHKNHHLSAQRKSTDPAYVDDIFQYKKPKLSSNNHTEFICSENSNRQEPEHVEINKERNNLPVNKEYVYEHCQKNTIEFGNSKPRQSTINQIDSTGLRRSRVHSVKDSRTNVSKSKRGRNTQHEKTQTDDRDCSLSQGTAISSSRGMDKFLTQQQHIALTLDDLPKESCELSTPALPSLKNDADNNNEACLNSKKPNTSNLDLSDSQEMQFLESIDQTKAVSFSELSLYKEIKLPHVTADQQPHTNREQCSSPCKPPENHSSDEKGKNLNEWEDSFLSFIKGGFADSDGDCHNSVKSAASQEECMAVCHNEETTTDGEKMNSRLFLSSENYSLQENELKAGSQTTYPQEKAVNYCDLNDTLIYKQPIPNHKQCTYGISFDYSYAISEHNYTSCTRSPSKQQVSQLTGQVELLKVFQDNSHSEPTLLVNQVNTYNVEKKQDTKRNYTIEGQKPSSSHSPLHTHSQVIEVTKAEERSQDLPENELVSNTDFHSTDNMNKELTNSIHLDQGEEKEIAHKSDEELTTNTSRAERTVRNCREEKENVGSATQMPCDTQDHGRDQNFRERKGSLKAPCSQVAEVNTAGIRKRNAKGESLLHVASRGGDLSLVKVLIASGADVNLKDNTGWTPLHEASSAGFNDVIIELLKAGANVNCENVDGMPPLHGAAVGNHLKAAETLLEHGANPNQKDQKQRTALEEADDEKMKDLLRSYGAVETSNGDEVGSTVPVKHPALRPKRCKPCPCDDGKTIAPPSPLRKAKRSENLPAHQTISAILQDIEEKQENLLKLEIRDSEDAEQYIGKMLEIKEIMDDILAQQKTERDDLAKKYRVSMESFKHGALREQLSNLATRQKKLLVVAKKQKKIRLKIQNYKNSKPLSGIKKRTCSSDISSEKKSQESPSMKNSAYPQSDLLSPVSLSAISPVNRNMEEIPLSMEMKKELSGNEMNSKQNVQDCALDGLLKSRLTDGTEKTGLSSQPVAFVPQAGNSQAESSLTETLVKGYEPDGSPAVTGTLSISEDKSVLSQNDACPPAVPQNLDLSRCNPKRRNKKTASNQPSVGTSEPLAHQAVTVLDTDTVQRVNSVPIPPSSGSVRQQPIKKPPHHSTAPKKKNMQLKDLLVRGRINTGKDILEFKTQETTHKASILLSGKLKVENGQIYQNPVTWLKDLLGGGNYVTWNYAWSKVTYLGKELLKYVSEEEPVPPEPCNTPQQQQPCLPGTSGKSVQSFPHYLQIKEILAISDQELLPSHVMEQHWKFYVECKTLPF
SIO_010081: Ankrd31
subclass of: SO_0000673
so part of: Ankrd31
location: complement(join(3520747..3520892,3537477..3537579,3543822..3543962,3552270..3553185,3560459..3560555,3563787..3563874,3565853..3565968,3568621..3568783,3578181..3578323,3579111..3579254,3586730..3586900,3587431..3588904,3589442..3589494,3589765..3589909,3593594..3593736,3601900..3602055,3610035..3610141,3610638..3610915,3613316..3613903,3618835..3618878,3628139..3628209,3650376..3650416,3660096..3660211,3666374..3666447,3676087..3676190))
location: region:3520747-3676190:-1
so has part: feature:3676087-3676190:-1:exon
so has part: feature:3666374-3666447:-1:exon
so has part: feature:3660096-3660211:-1:exon
so has part: feature:3650376-3650416:-1:exon
so has part: feature:3628139-3628209:-1:exon
so has part: feature:3618835-3618878:-1:exon
so has part: feature:3613316-3613903:-1:exon
so has part: feature:3610638-3610915:-1:exon
so has part: feature:3610035-3610141:-1:exon
so has part: feature:3601900-3602055:-1:exon
so has part: feature:3593594-3593736:-1:exon
so has part: feature:3589765-3589909:-1:exon
so has part: feature:3589442-3589494:-1:exon
so has part: feature:3587431-3588904:-1:exon
so has part: feature:3586730-3586900:-1:exon
so has part: feature:3579111-3579254:-1:exon
so has part: feature:3578181-3578323:-1:exon
so has part: feature:3568621-3568783:-1:exon
so has part: feature:3565853-3565968:-1:exon
so has part: feature:3563787-3563874:-1:exon
so has part: feature:3560459-3560555:-1:exon
so has part: feature:3552270-3553185:-1:exon
so has part: feature:3543822-3543962:-1:exon
so has part: feature:3537477-3537579:-1:exon
so has part: feature:3520747-3520892:-1:exon

XP_026639626.1
type: Protein
SIO_000068: ncbiprotein

position:3520747:-1
position: 3520747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676190:-1
position: 3676190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3676087-3676190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3666374-3666447:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3660096-3660211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650376-3650416:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3628139-3628209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3618835-3618878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3613316-3613903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3610638-3610915:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3610035-3610141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3601900-3602055:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3593594-3593736:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3589765-3589909:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3589442-3589494:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3587431-3588904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3586730-3586900:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3579111-3579254:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3578181-3578323:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3568621-3568783:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3565853-3565968:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3563787-3563874:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3560459-3560555:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3552270-3553185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3543822-3543962:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3537477-3537579:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3520747-3520892:-1:exon

LOC101993918
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101993918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3542336..3543142)
location: region:3542336-3543142:-1
so has part: feature:3542336-3543142:-1:exon

101993918
type: Gene
SIO_000068: ncbigene

position:3542336:-1
position: 3542336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543142:-1
position: 3543142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3542336-3543142:-1:exon

LOC101993918
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101993918
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101993918
subclass of: SO_0000673
so part of: LOC101993918
location: complement(3542336..3543142)
location: region:3542336-3543142:-1
so has part: feature:3542336-3543142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3542336-3543142:-1:exon

Hmgcr
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Hmgcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3754667..3775782
location: region:3754667-3775782:1
so has part: feature:3754667-3775782:1:exon
subclass of: SO_0000010

101994205
type: Gene
SIO_000068: ncbigene

position:3754667:1
position: 3754667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3775782:1
position: 3775782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3754667-3775782:1:exon

Hmgcr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hmgcr
product: 3-hydroxy-3-methylglutaryl-CoA reductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_026783733.1
SIO_010081: Hmgcr
subclass of: SO_0000673
so part of: Hmgcr
location: join(3754667..3754752,3759654..3759841,3760249..3760360,3760576..3760663,3761637..3761721,3762962..3763067,3766249..3766355,3766464..3766580,3767234..3767394,3767492..3767739,3767852..3768027,3768284..3768478,3768960..3769118,3769261..3769418,3770276..3770381,3771860..3772030,3772409..3772549,3772634..3772792,3773546..3773700,3774052..3775782)
location: region:3754667-3775782:1
so has part: feature:3754667-3754752:1:exon
so has part: feature:3759654-3759841:1:exon
so has part: feature:3760249-3760360:1:exon
so has part: feature:3760576-3760663:1:exon
so has part: feature:3761637-3761721:1:exon
so has part: feature:3762962-3763067:1:exon
so has part: feature:3766249-3766355:1:exon
so has part: feature:3766464-3766580:1:exon
so has part: feature:3767234-3767394:1:exon
so has part: feature:3767492-3767739:1:exon
so has part: feature:3767852-3768027:1:exon
so has part: feature:3768284-3768478:1:exon
so has part: feature:3768960-3769118:1:exon
so has part: feature:3769261-3769418:1:exon
so has part: feature:3770276-3770381:1:exon
so has part: feature:3771860-3772030:1:exon
so has part: feature:3772409-3772549:1:exon
so has part: feature:3772634-3772792:1:exon
so has part: feature:3773546-3773700:1:exon
so has part: feature:3774052-3775782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3754667-3754752:1:exon

position:3754752:1
position: 3754752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3759654-3759841:1:exon

position:3759654:1
position: 3759654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3759841:1
position: 3759841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3760249-3760360:1:exon

position:3760249:1
position: 3760249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3760360:1
position: 3760360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3760576-3760663:1:exon

position:3760576:1
position: 3760576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3760663:1
position: 3760663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3761637-3761721:1:exon

position:3761637:1
position: 3761637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3761721:1
position: 3761721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3762962-3763067:1:exon

position:3762962:1
position: 3762962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763067:1
position: 3763067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3766249-3766355:1:exon

position:3766249:1
position: 3766249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766355:1
position: 3766355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3766464-3766580:1:exon

position:3766464:1
position: 3766464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766580:1
position: 3766580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3767234-3767394:1:exon

position:3767234:1
position: 3767234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767394:1
position: 3767394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3767492-3767739:1:exon

position:3767492:1
position: 3767492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767739:1
position: 3767739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3767852-3768027:1:exon

position:3767852:1
position: 3767852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3768027:1
position: 3768027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3768284-3768478:1:exon

position:3768284:1
position: 3768284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3768478:1
position: 3768478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3768960-3769118:1:exon

position:3768960:1
position: 3768960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769118:1
position: 3769118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3769261-3769418:1:exon

position:3769261:1
position: 3769261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769418:1
position: 3769418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3770276-3770381:1:exon

position:3770276:1
position: 3770276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3770381:1
position: 3770381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3771860-3772030:1:exon

position:3771860:1
position: 3771860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772030:1
position: 3772030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3772409-3772549:1:exon

position:3772409:1
position: 3772409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772549:1
position: 3772549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3772634-3772792:1:exon

position:3772634:1
position: 3772634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772792:1
position: 3772792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3773546-3773700:1:exon

position:3773546:1
position: 3773546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3773700:1
position: 3773700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3774052-3775782:1:exon

position:3774052:1
position: 3774052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hmgcr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hmgcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-hydroxy-3-methylglutaryl-Coenzyme A reductase isoform X1
translation: MMGSKDRVATMLSRLFRMHGLFVASHPWEVIVGTVTLTICMMSMNMFTGNNKICGWNYECPKFEEDVLSSDIIILTITRCIAILYIYFQFQNLRQLGSKYILGIAGLFTIFSSFVFSTVVIHFLDKELTGLNEALPFFLLLIDLSRASALAKFALSSNSQDEVRENIARGMAILGPTFTLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACVSLVLELSRESREGRPIWQLSHFARVLEEEENKPNPVTQRVKMIMSLGLVLVHAHSRWIADPSPQNSTAEHSKVSLGLDEDVSKRIEPSVSLWQFYLSKMISMDIEQVITLSLALLLAVKYIFFEQAETESTLSLKNPITSPVVNPKRAQDNCCRREPLLVRKNQKLACVEEEPGANQDRKVEVIKPLVVETESASRATFVLGASVARPPVAPGTQEPEIDLPSEPRPTEECLQILESAEKGAKFLSDAEIIQLVNAKHIPAYKLETLMETHERGVSIRRQLLSTKLPEPSSLQYLPYRDYNYSLVMGACCENVIGYMPIPVGVAGPLCLDGKEYQVPMATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETPEGFAVVKEAFDSTSRFARLEKLHVSMAGRNLYIRFQSKTGDAMGMNMISKGTEKALLKLQEFFPEMQILAVSGNYCTDKKPAAINWIEGRGKTVVCEAVIPAKVVREVLKTTTEAMIDVNVNKNLVGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLMAALAAGHLVRSHMVHNRSKINLQDLQGTCTKKAA
SIO_010081: Hmgcr
subclass of: SO_0000673
so part of: Hmgcr
location: join(3754746..3754752,3759654..3759841,3760249..3760360,3760576..3760663,3761637..3761721,3762962..3763067,3766249..3766355,3766464..3766580,3767234..3767394,3767492..3767739,3767852..3768027,3768284..3768478,3768960..3769118,3769261..3769418,3770276..3770381,3771860..3772030,3772409..3772549,3772634..3772792,3773546..3773700,3774052..3774106)
location: region:3754746-3774106:1
so has part: feature:3754746-3754752:1:exon
so has part: feature:3759654-3759841:1:exon
so has part: feature:3760249-3760360:1:exon
so has part: feature:3760576-3760663:1:exon
so has part: feature:3761637-3761721:1:exon
so has part: feature:3762962-3763067:1:exon
so has part: feature:3766249-3766355:1:exon
so has part: feature:3766464-3766580:1:exon
so has part: feature:3767234-3767394:1:exon
so has part: feature:3767492-3767739:1:exon
so has part: feature:3767852-3768027:1:exon
so has part: feature:3768284-3768478:1:exon
so has part: feature:3768960-3769118:1:exon
so has part: feature:3769261-3769418:1:exon
so has part: feature:3770276-3770381:1:exon
so has part: feature:3771860-3772030:1:exon
so has part: feature:3772409-3772549:1:exon
so has part: feature:3772634-3772792:1:exon
so has part: feature:3773546-3773700:1:exon
so has part: feature:3774052-3774106:1:exon

XP_026639534.1
type: Protein
SIO_000068: ncbiprotein

position:3754746:1
position: 3754746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3774106:1
position: 3774106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3754746-3754752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3759654-3759841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760249-3760360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3760576-3760663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3761637-3761721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3762962-3763067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766249-3766355:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3766464-3766580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3767234-3767394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3767492-3767739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3767852-3768027:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3768284-3768478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3768960-3769118:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3769261-3769418:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3770276-3770381:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3771860-3772030:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3772409-3772549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3772634-3772792:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3773546-3773700:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3774052-3774106:1:exon

Hmgcr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Hmgcr
product: 3-hydroxy-3-methylglutaryl-CoA reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005356452.2
SIO_010081: Hmgcr
subclass of: SO_0000673
so part of: Hmgcr
location: join(3755266..3755358,3759654..3759841,3760249..3760360,3760576..3760663,3761637..3761721,3762962..3763067,3766249..3766355,3766464..3766580,3767234..3767394,3767492..3767739,3767852..3768027,3768284..3768478,3768960..3769118,3769261..3769418,3770276..3770381,3771860..3772030,3772409..3772549,3772634..3772792,3773546..3773700,3774052..3775782)
location: region:3755266-3775782:1
so has part: feature:3755266-3755358:1:exon
so has part: feature:3759654-3759841:1:exon
so has part: feature:3760249-3760360:1:exon
so has part: feature:3760576-3760663:1:exon
so has part: feature:3761637-3761721:1:exon
so has part: feature:3762962-3763067:1:exon
so has part: feature:3766249-3766355:1:exon
so has part: feature:3766464-3766580:1:exon
so has part: feature:3767234-3767394:1:exon
so has part: feature:3767492-3767739:1:exon
so has part: feature:3767852-3768027:1:exon
so has part: feature:3768284-3768478:1:exon
so has part: feature:3768960-3769118:1:exon
so has part: feature:3769261-3769418:1:exon
so has part: feature:3770276-3770381:1:exon
so has part: feature:3771860-3772030:1:exon
so has part: feature:3772409-3772549:1:exon
so has part: feature:3772634-3772792:1:exon
so has part: feature:3773546-3773700:1:exon
so has part: feature:3774052-3775782:1:exon

position:3755266:1
position: 3755266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3755266-3755358:1:exon

position:3755358:1
position: 3755358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3759654-3759841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760249-3760360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3760576-3760663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3761637-3761721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3762962-3763067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766249-3766355:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3766464-3766580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3767234-3767394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3767492-3767739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3767852-3768027:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3768284-3768478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3768960-3769118:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3769261-3769418:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3770276-3770381:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3771860-3772030:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3772409-3772549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3772634-3772792:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3773546-3773700:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3774052-3775782:1:exon

Hmgcr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Hmgcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-hydroxy-3-methylglutaryl-Coenzyme A reductase isoform X2
translation: MLSRLFRMHGLFVASHPWEVIVGTVTLTICMMSMNMFTGNNKICGWNYECPKFEEDVLSSDIIILTITRCIAILYIYFQFQNLRQLGSKYILGIAGLFTIFSSFVFSTVVIHFLDKELTGLNEALPFFLLLIDLSRASALAKFALSSNSQDEVRENIARGMAILGPTFTLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACVSLVLELSRESREGRPIWQLSHFARVLEEEENKPNPVTQRVKMIMSLGLVLVHAHSRWIADPSPQNSTAEHSKVSLGLDEDVSKRIEPSVSLWQFYLSKMISMDIEQVITLSLALLLAVKYIFFEQAETESTLSLKNPITSPVVNPKRAQDNCCRREPLLVRKNQKLACVEEEPGANQDRKVEVIKPLVVETESASRATFVLGASVARPPVAPGTQEPEIDLPSEPRPTEECLQILESAEKGAKFLSDAEIIQLVNAKHIPAYKLETLMETHERGVSIRRQLLSTKLPEPSSLQYLPYRDYNYSLVMGACCENVIGYMPIPVGVAGPLCLDGKEYQVPMATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETPEGFAVVKEAFDSTSRFARLEKLHVSMAGRNLYIRFQSKTGDAMGMNMISKGTEKALLKLQEFFPEMQILAVSGNYCTDKKPAAINWIEGRGKTVVCEAVIPAKVVREVLKTTTEAMIDVNVNKNLVGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLMAALAAGHLVRSHMVHNRSKINLQDLQGTCTKKAA
SIO_010081: Hmgcr
subclass of: SO_0000673
so part of: Hmgcr
location: join(3759677..3759841,3760249..3760360,3760576..3760663,3761637..3761721,3762962..3763067,3766249..3766355,3766464..3766580,3767234..3767394,3767492..3767739,3767852..3768027,3768284..3768478,3768960..3769118,3769261..3769418,3770276..3770381,3771860..3772030,3772409..3772549,3772634..3772792,3773546..3773700,3774052..3774106)
location: region:3759677-3774106:1
so has part: feature:3759677-3759841:1:exon
so has part: feature:3760249-3760360:1:exon
so has part: feature:3760576-3760663:1:exon
so has part: feature:3761637-3761721:1:exon
so has part: feature:3762962-3763067:1:exon
so has part: feature:3766249-3766355:1:exon
so has part: feature:3766464-3766580:1:exon
so has part: feature:3767234-3767394:1:exon
so has part: feature:3767492-3767739:1:exon
so has part: feature:3767852-3768027:1:exon
so has part: feature:3768284-3768478:1:exon
so has part: feature:3768960-3769118:1:exon
so has part: feature:3769261-3769418:1:exon
so has part: feature:3770276-3770381:1:exon
so has part: feature:3771860-3772030:1:exon
so has part: feature:3772409-3772549:1:exon
so has part: feature:3772634-3772792:1:exon
so has part: feature:3773546-3773700:1:exon
so has part: feature:3774052-3774106:1:exon

XP_005356509.1
type: Protein
SIO_000068: ncbiprotein

position:3759677:1
position: 3759677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3759677-3759841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3760249-3760360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760576-3760663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3761637-3761721:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3762962-3763067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3766249-3766355:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766464-3766580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3767234-3767394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3767492-3767739:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3767852-3768027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3768284-3768478:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3768960-3769118:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3769261-3769418:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3770276-3770381:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3771860-3772030:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3772409-3772549:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3772634-3772792:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3773546-3773700:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3774052-3774106:1:exon

Col4a3bp
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Col4a3bp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3802455..3904114)
location: region:3802455-3904114:-1
so has part: feature:3802455-3904114:-1:exon
subclass of: SO_0000010

101994501
type: Gene
SIO_000068: ncbigene

position:3802455:-1
position: 3802455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3904114:-1
position: 3904114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3802455-3904114:-1:exon

Col4a3bp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Col4a3bp
product: collagen type IV alpha 3 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005356453.2
SIO_010081: Col4a3bp
subclass of: SO_0000673
so part of: Col4a3bp
location: complement(join(3802455..3804588,3806596..3806732,3807570..3807699,3808429..3808557,3811486..3811556,3812642..3812774,3814832..3814927,3820192..3820269,3820757..3820849,3823370..3823456,3825678..3825770,3828082..3828239,3832986..3833069,3835118..3835256,3835937..3836044,3863362..3863478,3897457..3897591,3903652..3904114))
location: region:3802455-3904114:-1
so has part: feature:3903652-3904114:-1:exon
so has part: feature:3897457-3897591:-1:exon
so has part: feature:3863362-3863478:-1:exon
so has part: feature:3835937-3836044:-1:exon
so has part: feature:3835118-3835256:-1:exon
so has part: feature:3832986-3833069:-1:exon
so has part: feature:3828082-3828239:-1:exon
so has part: feature:3825678-3825770:-1:exon
so has part: feature:3823370-3823456:-1:exon
so has part: feature:3820757-3820849:-1:exon
so has part: feature:3820192-3820269:-1:exon
so has part: feature:3814832-3814927:-1:exon
so has part: feature:3812642-3812774:-1:exon
so has part: feature:3811486-3811556:-1:exon
so has part: feature:3808429-3808557:-1:exon
so has part: feature:3807570-3807699:-1:exon
so has part: feature:3806596-3806732:-1:exon
so has part: feature:3802455-3804588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3903652-3904114:-1:exon

position:3903652:-1
position: 3903652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3897457-3897591:-1:exon

position:3897457:-1
position: 3897457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3897591:-1
position: 3897591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3863362-3863478:-1:exon

position:3863362:-1
position: 3863362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3863478:-1
position: 3863478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3835937-3836044:-1:exon

position:3835937:-1
position: 3835937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3836044:-1
position: 3836044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3835118-3835256:-1:exon

position:3835118:-1
position: 3835118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3835256:-1
position: 3835256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3832986-3833069:-1:exon

position:3832986:-1
position: 3832986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3833069:-1
position: 3833069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3828082-3828239:-1:exon

position:3828082:-1
position: 3828082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3828239:-1
position: 3828239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3825678-3825770:-1:exon

position:3825678:-1
position: 3825678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3825770:-1
position: 3825770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3823370-3823456:-1:exon

position:3823370:-1
position: 3823370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3823456:-1
position: 3823456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3820757-3820849:-1:exon

position:3820757:-1
position: 3820757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3820849:-1
position: 3820849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3820192-3820269:-1:exon

position:3820192:-1
position: 3820192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3820269:-1
position: 3820269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3814832-3814927:-1:exon

position:3814832:-1
position: 3814832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3814927:-1
position: 3814927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3812642-3812774:-1:exon

position:3812642:-1
position: 3812642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3812774:-1
position: 3812774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3811486-3811556:-1:exon

position:3811486:-1
position: 3811486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3811556:-1
position: 3811556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3808429-3808557:-1:exon

position:3808429:-1
position: 3808429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3808557:-1
position: 3808557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3807570-3807699:-1:exon

position:3807570:-1
position: 3807570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3807699:-1
position: 3807699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3806596-3806732:-1:exon

position:3806596:-1
position: 3806596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3806732:-1
position: 3806732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3802455-3804588:-1:exon

position:3804588:-1
position: 3804588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Col4a3bp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Col4a3bp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen type IV alpha-3-binding protein
translation: MSDNQSWNSSGSEEDPETESGPPVERCGVLSKWTNYIHGWQDRWVVLKNNTLSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHKTESGYGSESSLRRHGSMVSLVSGASGYSATSTSSFKKGHSLREKLAEMETFRDILCRQVDTLQKYFDVCADAVSKDELQRDKVVEDDEDDFPTTRSDGDFLHNTNGNKEKLFPHITPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREESWQKRHDKDSEKRRRLEEAYKNAMAELKKKPRFGGPDYEEGPNSLINEEEFFDAVEAALDRQDKIEEQSQSEKARLHWPTSLPSGDAFSSVGTHRYVQKPYSRSSSMSSIDLVSASDDVHRFSSQVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQTHKRVWPASQRDVLYLSAIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTTGKPILF
SIO_010081: Col4a3bp
subclass of: SO_0000673
so part of: Col4a3bp
location: complement(join(3806605..3806732,3807570..3807699,3808429..3808557,3811486..3811556,3812642..3812774,3814832..3814927,3820192..3820269,3820757..3820849,3823370..3823456,3825678..3825770,3828082..3828239,3832986..3833069,3835118..3835256,3835937..3836044,3863362..3863478,3897457..3897591,3903652..3903747))
location: region:3806605-3903747:-1
so has part: feature:3903652-3903747:-1:exon
so has part: feature:3897457-3897591:-1:exon
so has part: feature:3863362-3863478:-1:exon
so has part: feature:3835937-3836044:-1:exon
so has part: feature:3835118-3835256:-1:exon
so has part: feature:3832986-3833069:-1:exon
so has part: feature:3828082-3828239:-1:exon
so has part: feature:3825678-3825770:-1:exon
so has part: feature:3823370-3823456:-1:exon
so has part: feature:3820757-3820849:-1:exon
so has part: feature:3820192-3820269:-1:exon
so has part: feature:3814832-3814927:-1:exon
so has part: feature:3812642-3812774:-1:exon
so has part: feature:3811486-3811556:-1:exon
so has part: feature:3808429-3808557:-1:exon
so has part: feature:3807570-3807699:-1:exon
so has part: feature:3806605-3806732:-1:exon

XP_005356510.1
type: Protein
SIO_000068: ncbiprotein

position:3806605:-1
position: 3806605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3903747:-1
position: 3903747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3903652-3903747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3897457-3897591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3863362-3863478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3835937-3836044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3835118-3835256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3832986-3833069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3828082-3828239:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3825678-3825770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3823370-3823456:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3820757-3820849:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3820192-3820269:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3814832-3814927:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3812642-3812774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3811486-3811556:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3808429-3808557:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3807570-3807699:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3806605-3806732:-1:exon

Polk
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Polk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3904389..3963639
location: region:3904389-3963639:1
so has part: feature:3904389-3963639:1:exon
subclass of: SO_0000010

101994978
type: Gene
SIO_000068: ncbigene

position:3904389:1
position: 3904389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3963639:1
position: 3963639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3904389-3963639:1:exon

Polk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Polk
product: DNA polymerase kappa
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005356455.3
SIO_010081: Polk
subclass of: SO_0000673
so part of: Polk
location: join(3904389..3904588,3927579..3927741,3930657..3930776,3938290..3938442,3941518..3941649,3944473..3944626,3948739..3948984,3950086..3950210,3951519..3951685,3954667..3954699,3956126..3956222,3957769..3957940,3959712..3960614,3961512..3961545,3961856..3963639)
location: region:3904389-3963639:1
so has part: feature:3904389-3904588:1:exon
so has part: feature:3927579-3927741:1:exon
so has part: feature:3930657-3930776:1:exon
so has part: feature:3938290-3938442:1:exon
so has part: feature:3941518-3941649:1:exon
so has part: feature:3944473-3944626:1:exon
so has part: feature:3948739-3948984:1:exon
so has part: feature:3950086-3950210:1:exon
so has part: feature:3951519-3951685:1:exon
so has part: feature:3954667-3954699:1:exon
so has part: feature:3956126-3956222:1:exon
so has part: feature:3957769-3957940:1:exon
so has part: feature:3959712-3960614:1:exon
so has part: feature:3961512-3961545:1:exon
so has part: feature:3961856-3963639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3904389-3904588:1:exon

position:3904588:1
position: 3904588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3927579-3927741:1:exon

position:3927579:1
position: 3927579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3927741:1
position: 3927741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3930657-3930776:1:exon

position:3930657:1
position: 3930657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3930776:1
position: 3930776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3938290-3938442:1:exon

position:3938290:1
position: 3938290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3938442:1
position: 3938442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3941518-3941649:1:exon

position:3941518:1
position: 3941518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3941649:1
position: 3941649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3944473-3944626:1:exon

position:3944473:1
position: 3944473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3944626:1
position: 3944626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3948739-3948984:1:exon

position:3948739:1
position: 3948739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3948984:1
position: 3948984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3950086-3950210:1:exon

position:3950086:1
position: 3950086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3950210:1
position: 3950210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3951519-3951685:1:exon

position:3951519:1
position: 3951519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3951685:1
position: 3951685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3954667-3954699:1:exon

position:3954667:1
position: 3954667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3954699:1
position: 3954699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3956126-3956222:1:exon

position:3956126:1
position: 3956126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3956222:1
position: 3956222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3957769-3957940:1:exon

position:3957769:1
position: 3957769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3957940:1
position: 3957940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3959712-3960614:1:exon

position:3959712:1
position: 3959712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3960614:1
position: 3960614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3961512-3961545:1:exon

position:3961512:1
position: 3961512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3961545:1
position: 3961545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3961856-3963639:1:exon

position:3961856:1
position: 3961856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Polk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Polk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase kappa
translation: MDNTKEKNNYKDDLLLRMGLNDNKAGMEGLDKEKINKIIMDATKGSRFYGNELKKEKQVNQRIANMMQQKAQITNQQLRKAQLEVDRFAMELERNRNLNNTIVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSMLATSNYHARRFGVRAALPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAVSLDEAYLNITQHLEERQDWPEGKRRYFSKTGNSVKIDLGEPGKEADKLNEDEGSISPLLFEDSPPDLQPKGNPSQLNSEEQSNLQILQNSVVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRKAVMDFIKDLPIRKVSGIGKVTEKMLMALGIVTCTELYQQRALLSLLFSETSWHYFLHIALGLGSTELARDGERKSMSVERTFSEIFKTEEQYSLCQELCTELARDLQKEGLKGRTVTVKLKNVNFEVKTRASTVQSTLSTAEEIFAVAKELLRTEISAASPHPLRLRLMGVRMSTFSNEDDKKHQQRSIIGFLQAGHQALPSPGCVLDKTDKTEFAKPLEMSHKKSFFDKKRSERILSHQDAPLCEIVDQQAVQTSQPFQALKKTSESLETSKNSNNCQTFTCPVCFREQEGISLEAFNEHVDACLDEPSTSENSDSRASSAAIGQKEDVHHSIPLRETRDDEDAKFTSADGEDLAETEDNSLKAASMDTLGSNHGKEECSDTPNQSCPVSLANETVRILSRQESIQHCPDEVVTGRALVCPVCNLEQKTSDLTLFNVHVDICLNKGIIQELRNNEVNSANQPKGSSRSTDRLQKAAGRTKRPGLKTKSSTSRKTKAQSSRHTLDIFFK
SIO_010081: Polk
subclass of: SO_0000673
so part of: Polk
location: join(3927610..3927741,3930657..3930776,3938290..3938442,3941518..3941649,3944473..3944626,3948739..3948984,3950086..3950210,3951519..3951685,3954667..3954699,3956126..3956222,3957769..3957940,3959712..3960614,3961512..3961545,3961856..3961940)
location: region:3927610-3961940:1
so has part: feature:3927610-3927741:1:exon
so has part: feature:3930657-3930776:1:exon
so has part: feature:3938290-3938442:1:exon
so has part: feature:3941518-3941649:1:exon
so has part: feature:3944473-3944626:1:exon
so has part: feature:3948739-3948984:1:exon
so has part: feature:3950086-3950210:1:exon
so has part: feature:3951519-3951685:1:exon
so has part: feature:3954667-3954699:1:exon
so has part: feature:3956126-3956222:1:exon
so has part: feature:3957769-3957940:1:exon
so has part: feature:3959712-3960614:1:exon
so has part: feature:3961512-3961545:1:exon
so has part: feature:3961856-3961940:1:exon

XP_005356512.1
type: Protein
SIO_000068: ncbiprotein

position:3927610:1
position: 3927610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3961940:1
position: 3961940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3927610-3927741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3930657-3930776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3938290-3938442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3941518-3941649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3944473-3944626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3948739-3948984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3950086-3950210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3951519-3951685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3954667-3954699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3956126-3956222:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3957769-3957940:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3959712-3960614:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3961512-3961545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3961856-3961940:1:exon

Ankdd1b
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ankdd1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3972540..4043561
location: region:3972540-4043561:1
so has part: feature:3972540-4043561:1:exon
subclass of: SO_0000010

101995267
type: Gene
SIO_000068: ncbigene

position:3972540:1
position: 3972540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4043561:1
position: 4043561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972540-4043561:1:exon

Ankdd1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ankdd1b
product: ankyrin repeat and death domain containing 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005356456.2
SIO_010081: Ankdd1b
subclass of: SO_0000673
so part of: Ankdd1b
location: join(3972540..3972711,3983976..3984079,3989400..3989498,3997572..3997670,3997793..3997897,4009113..4009211,4010404..4010502,4022074..4022172,4025614..4025712,4028877..4028975,4034112..4034207,4038982..4039183,4041077..4041208,4042585..4043561)
location: region:3972540-4043561:1
so has part: feature:3972540-3972711:1:exon
so has part: feature:3983976-3984079:1:exon
so has part: feature:3989400-3989498:1:exon
so has part: feature:3997572-3997670:1:exon
so has part: feature:3997793-3997897:1:exon
so has part: feature:4009113-4009211:1:exon
so has part: feature:4010404-4010502:1:exon
so has part: feature:4022074-4022172:1:exon
so has part: feature:4025614-4025712:1:exon
so has part: feature:4028877-4028975:1:exon
so has part: feature:4034112-4034207:1:exon
so has part: feature:4038982-4039183:1:exon
so has part: feature:4041077-4041208:1:exon
so has part: feature:4042585-4043561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3972540-3972711:1:exon

position:3972711:1
position: 3972711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3983976-3984079:1:exon

position:3983976:1
position: 3983976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3984079:1
position: 3984079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3989400-3989498:1:exon

position:3989400:1
position: 3989400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3989498:1
position: 3989498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3997572-3997670:1:exon

position:3997572:1
position: 3997572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3997670:1
position: 3997670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3997793-3997897:1:exon

position:3997793:1
position: 3997793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3997897:1
position: 3997897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4009113-4009211:1:exon

position:4009113:1
position: 4009113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4009211:1
position: 4009211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4010404-4010502:1:exon

position:4010404:1
position: 4010404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4010502:1
position: 4010502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4022074-4022172:1:exon

position:4022074:1
position: 4022074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4022172:1
position: 4022172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4025614-4025712:1:exon

position:4025614:1
position: 4025614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4025712:1
position: 4025712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4028877-4028975:1:exon

position:4028877:1
position: 4028877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028975:1
position: 4028975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4034112-4034207:1:exon

position:4034112:1
position: 4034112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4034207:1
position: 4034207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4038982-4039183:1:exon

position:4038982:1
position: 4038982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4039183:1
position: 4039183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4041077-4041208:1:exon

position:4041077:1
position: 4041077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041208:1
position: 4041208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4042585-4043561:1:exon

position:4042585:1
position: 4042585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ankdd1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ankdd1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and death domain-containing protein 1B
translation: MNPESSRGHGARELMLQAARVLRADLRGAATGPWRNLARVPKPEGTDEEATAAGHENLLPIERSFQNAAKSNNLALMEKLFEKKVNINAVNTMNRTALHFAVARSNLSAVDFLLSHKARVDVADKHGLTVIHLAAWSGSFEIMLMLVKAGADQRAKSQEGMNALHFAAQNNNLHIVDYLIQDLHLQDLNQPNERGRKPFLLAAERGHVEMIEKLIFLHLQTSEKDNEGNTALHLAAMHGHSPAVQVLLTQWPEVNETNELHVSALQAATRKGHTSLVNFLLHENVGLQQQKEPQESPLHLAVINNHPTVVNSLLSAQHDVNVLDQRQQTPLHVAADLGNVELVDTLLKAGCDLKITDKQGKTALAVAARSHHSLVVDMLIKAERYHTWRETHPESIQGSAGCSTLTFKQDHSVETRRIRTLLWNLAYRQLKEKDWQRLARLWNFSEDQIRAIEEQWSGNKSFREHGYRALLIWLHGALMTQPDPAKQLDKALVRAGFPESAGKIRQFEGKTDPSSKKCAVS
SIO_010081: Ankdd1b
subclass of: SO_0000673
so part of: Ankdd1b
location: join(3972540..3972711,3983976..3984079,3989400..3989498,3997572..3997670,3997793..3997897,4009113..4009211,4010404..4010502,4022074..4022172,4025614..4025712,4028877..4028975,4034112..4034207,4038982..4039183,4041077..4041208,4042585..4042646)
location: region:3972540-4042646:1
so has part: feature:3972540-3972711:1:exon
so has part: feature:3983976-3984079:1:exon
so has part: feature:3989400-3989498:1:exon
so has part: feature:3997572-3997670:1:exon
so has part: feature:3997793-3997897:1:exon
so has part: feature:4009113-4009211:1:exon
so has part: feature:4010404-4010502:1:exon
so has part: feature:4022074-4022172:1:exon
so has part: feature:4025614-4025712:1:exon
so has part: feature:4028877-4028975:1:exon
so has part: feature:4034112-4034207:1:exon
so has part: feature:4038982-4039183:1:exon
so has part: feature:4041077-4041208:1:exon
so has part: feature:4042585-4042646:1:exon

XP_005356513.1
type: Protein
SIO_000068: ncbiprotein

position:4042646:1
position: 4042646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972540-3972711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3983976-3984079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3989400-3989498:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3997572-3997670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3997793-3997897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4009113-4009211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4010404-4010502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4022074-4022172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4025614-4025712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4028877-4028975:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4034112-4034207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4038982-4039183:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4041077-4041208:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4042585-4042646:1:exon

Poc5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Poc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4044962..4078284)
location: region:4044962-4078284:-1
so has part: feature:4044962-4078284:-1:exon
subclass of: SO_0000010

101995563
type: Gene
SIO_000068: ncbigene

position:4044962:-1
position: 4044962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4078284:-1
position: 4078284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4044962-4078284:-1:exon

Poc5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Poc5
product: POC5 centriolar protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783795.1
SIO_010081: Poc5
subclass of: SO_0000673
so part of: Poc5
location: complement(join(4044962..4045840,4048629..4048805,4055798..4056075,4059231..4059384,4060340..4060519,4063351..4063455,4065668..4065844,4067853..4068058,4069320..4069391,4071992..4072109,4074564..4074648,4075904..4076052,4078030..4078284))
location: region:4044962-4078284:-1
so has part: feature:4078030-4078284:-1:exon
so has part: feature:4075904-4076052:-1:exon
so has part: feature:4074564-4074648:-1:exon
so has part: feature:4071992-4072109:-1:exon
so has part: feature:4069320-4069391:-1:exon
so has part: feature:4067853-4068058:-1:exon
so has part: feature:4065668-4065844:-1:exon
so has part: feature:4063351-4063455:-1:exon
so has part: feature:4060340-4060519:-1:exon
so has part: feature:4059231-4059384:-1:exon
so has part: feature:4055798-4056075:-1:exon
so has part: feature:4048629-4048805:-1:exon
so has part: feature:4044962-4045840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4078030-4078284:-1:exon

position:4078030:-1
position: 4078030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4075904-4076052:-1:exon

position:4075904:-1
position: 4075904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4076052:-1
position: 4076052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4074564-4074648:-1:exon

position:4074564:-1
position: 4074564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4074648:-1
position: 4074648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4071992-4072109:-1:exon

position:4071992:-1
position: 4071992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4072109:-1
position: 4072109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4069320-4069391:-1:exon

position:4069320:-1
position: 4069320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4069391:-1
position: 4069391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4067853-4068058:-1:exon

position:4067853:-1
position: 4067853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4068058:-1
position: 4068058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4065668-4065844:-1:exon

position:4065668:-1
position: 4065668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4065844:-1
position: 4065844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4063351-4063455:-1:exon

position:4063351:-1
position: 4063351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4063455:-1
position: 4063455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4060340-4060519:-1:exon

position:4060340:-1
position: 4060340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4060519:-1
position: 4060519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4059231-4059384:-1:exon

position:4059231:-1
position: 4059231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059384:-1
position: 4059384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4055798-4056075:-1:exon

position:4055798:-1
position: 4055798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4056075:-1
position: 4056075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4048629-4048805:-1:exon

position:4048629:-1
position: 4048629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4048805:-1
position: 4048805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4044962-4045840:-1:exon

position:4045840:-1
position: 4045840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poc5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Poc5
product: POC5 centriolar protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_013349639.2
SIO_010081: Poc5
subclass of: SO_0000673
so part of: Poc5
location: complement(join(4044962..4045840,4048629..4048805,4055798..4056075,4059231..4059384,4060340..4060519,4063351..4063455,4065668..4065844,4067853..4068058,4071992..4072109,4074564..4074659,4075904..4076052,4078030..4078284))
location: region:4044962-4078284:-1
so has part: feature:4078030-4078284:-1:exon
so has part: feature:4075904-4076052:-1:exon
so has part: feature:4074564-4074659:-1:exon
so has part: feature:4071992-4072109:-1:exon
so has part: feature:4067853-4068058:-1:exon
so has part: feature:4065668-4065844:-1:exon
so has part: feature:4063351-4063455:-1:exon
so has part: feature:4060340-4060519:-1:exon
so has part: feature:4059231-4059384:-1:exon
so has part: feature:4055798-4056075:-1:exon
so has part: feature:4048629-4048805:-1:exon
so has part: feature:4044962-4045840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4078030-4078284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4075904-4076052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4074564-4074659:-1:exon

position:4074659:-1
position: 4074659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4071992-4072109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4067853-4068058:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4065668-4065844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4063351-4063455:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4060340-4060519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4059231-4059384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4055798-4056075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4048629-4048805:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4044962-4045840:-1:exon

Poc5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Poc5
product: POC5 centriolar protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005356457.3
SIO_010081: Poc5
subclass of: SO_0000673
so part of: Poc5
location: complement(join(4044962..4045840,4048629..4048805,4055798..4056075,4059231..4059384,4060340..4060519,4063351..4063455,4065668..4065844,4067853..4068058,4069320..4069391,4071992..4072109,4074564..4074659,4075904..4076052,4078030..4078284))
location: region:4044962-4078284:-1
so has part: feature:4078030-4078284:-1:exon
so has part: feature:4075904-4076052:-1:exon
so has part: feature:4074564-4074659:-1:exon
so has part: feature:4071992-4072109:-1:exon
so has part: feature:4069320-4069391:-1:exon
so has part: feature:4067853-4068058:-1:exon
so has part: feature:4065668-4065844:-1:exon
so has part: feature:4063351-4063455:-1:exon
so has part: feature:4060340-4060519:-1:exon
so has part: feature:4059231-4059384:-1:exon
so has part: feature:4055798-4056075:-1:exon
so has part: feature:4048629-4048805:-1:exon
so has part: feature:4044962-4045840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4078030-4078284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4075904-4076052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4074564-4074659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4071992-4072109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4069320-4069391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4067853-4068058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4065668-4065844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4063351-4063455:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4060340-4060519:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4059231-4059384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4055798-4056075:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4048629-4048805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4044962-4045840:-1:exon

Poc5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Poc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein POC5 isoform X2
translation: MSSDEDKYSLRVAHNNSDHDSSISTDLQEEYEELLRYAIVNPNVESGASQPSHPKGEVVPDRFPMPAGSSPVSSPRKPSHPVMDFFSSHLLDDSSSPASTSTHRDAHEIIVGDRLVSDENLQKVENILDLWSSGLKTNILSELSKWRLNFIDWHRVEMKKEKEKHAALVKQLSSQIADLKELQKAFEVSLRRKDEVISSLSHAIGKQKERTELMKTFFHWRISHVKSRQDVYEDKLADQYFRRTLLKKVWKGWRSVVQRQWKEVVERACQARAEEVCVQISNDYEAKLAMLSGALENAKAEIQRMQQEKEHFEDSMKKAFMRGVCALNLEAMTIFQNKNDAGVDFTNNKREESGPTGPGRELSAHLDTSSSTIPSSVPPQLLPSATAAAGVASATAIPSAASMTSAGATSASSAHVPISVLGAGSAATTAPEEMYIPRVVTSAQQKAGKTITARITGRCDFASKTRVSSSLAIMGVSPPMSSVVVEKHHPVTVQTIPQAAAAKYPRTIHPEGGGVPASRSLGARPAHTQSLSNFQSIKVVD
SIO_010081: Poc5
subclass of: SO_0000673
so part of: Poc5
location: complement(join(4045694..4045840,4048629..4048805,4055798..4056075,4059231..4059384,4060340..4060519,4063351..4063455,4065668..4065844,4067853..4068058,4071992..4072109,4074564..4074647))
location: region:4045694-4074647:-1
so has part: feature:4074564-4074647:-1:exon
so has part: feature:4071992-4072109:-1:exon
so has part: feature:4067853-4068058:-1:exon
so has part: feature:4065668-4065844:-1:exon
so has part: feature:4063351-4063455:-1:exon
so has part: feature:4060340-4060519:-1:exon
so has part: feature:4059231-4059384:-1:exon
so has part: feature:4055798-4056075:-1:exon
so has part: feature:4048629-4048805:-1:exon
so has part: feature:4045694-4045840:-1:exon

XP_013205093.1
type: Protein
SIO_000068: ncbiprotein

position:4045694:-1
position: 4045694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4074647:-1
position: 4074647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4074564-4074647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4071992-4072109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4067853-4068058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4065668-4065844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4063351-4063455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4060340-4060519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4059231-4059384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4055798-4056075:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4048629-4048805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4045694-4045840:-1:exon

Poc5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Poc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein POC5 isoform X1
translation: MSSDEDKYSLRVAHNNSDHDSSISTDLQEEYEELLRYAIVNPNVESGASQPSHPKGEVVPDRFPMPAGNNPVKETAMEIGKGCDISSHSKSGSSPVSSPRKPSHPVMDFFSSHLLDDSSSPASTSTHRDAHEIIVGDRLVSDENLQKVENILDLWSSGLKTNILSELSKWRLNFIDWHRVEMKKEKEKHAALVKQLSSQIADLKELQKAFEVSLRRKDEVISSLSHAIGKQKERTELMKTFFHWRISHVKSRQDVYEDKLADQYFRRTLLKKVWKGWRSVVQRQWKEVVERACQARAEEVCVQISNDYEAKLAMLSGALENAKAEIQRMQQEKEHFEDSMKKAFMRGVCALNLEAMTIFQNKNDAGVDFTNNKREESGPTGPGRELSAHLDTSSSTIPSSVPPQLLPSATAAAGVASATAIPSAASMTSAGATSASSAHVPISVLGAGSAATTAPEEMYIPRVVTSAQQKAGKTITARITGRCDFASKTRVSSSLAIMGVSPPMSSVVVEKHHPVTVQTIPQAAAAKYPRTIHPEGGGVPASRSLGARPAHTQSLSNFQSIKVVD
SIO_010081: Poc5
subclass of: SO_0000673
so part of: Poc5
location: complement(join(4045694..4045840,4048629..4048805,4055798..4056075,4059231..4059384,4060340..4060519,4063351..4063455,4065668..4065844,4067853..4068058,4069320..4069391,4071992..4072109,4074564..4074647))
location: region:4045694-4074647:-1
so has part: feature:4074564-4074647:-1:exon
so has part: feature:4071992-4072109:-1:exon
so has part: feature:4069320-4069391:-1:exon
so has part: feature:4067853-4068058:-1:exon
so has part: feature:4065668-4065844:-1:exon
so has part: feature:4063351-4063455:-1:exon
so has part: feature:4060340-4060519:-1:exon
so has part: feature:4059231-4059384:-1:exon
so has part: feature:4055798-4056075:-1:exon
so has part: feature:4048629-4048805:-1:exon
so has part: feature:4045694-4045840:-1:exon

XP_026639596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4074564-4074647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4071992-4072109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4069320-4069391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4067853-4068058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4065668-4065844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4063351-4063455:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4060340-4060519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4059231-4059384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4055798-4056075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4048629-4048805:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4045694-4045840:-1:exon

Poc5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Poc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein POC5 isoform X1
translation: MSSDEDKYSLRVAHNNSDHDSSISTDLQEEYEELLRYAIVNPNVESGASQPSHPKGEVVPDRFPMPAGNNPVKETAMEIGKGCDISSHSKSGSSPVSSPRKPSHPVMDFFSSHLLDDSSSPASTSTHRDAHEIIVGDRLVSDENLQKVENILDLWSSGLKTNILSELSKWRLNFIDWHRVEMKKEKEKHAALVKQLSSQIADLKELQKAFEVSLRRKDEVISSLSHAIGKQKERTELMKTFFHWRISHVKSRQDVYEDKLADQYFRRTLLKKVWKGWRSVVQRQWKEVVERACQARAEEVCVQISNDYEAKLAMLSGALENAKAEIQRMQQEKEHFEDSMKKAFMRGVCALNLEAMTIFQNKNDAGVDFTNNKREESGPTGPGRELSAHLDTSSSTIPSSVPPQLLPSATAAAGVASATAIPSAASMTSAGATSASSAHVPISVLGAGSAATTAPEEMYIPRVVTSAQQKAGKTITARITGRCDFASKTRVSSSLAIMGVSPPMSSVVVEKHHPVTVQTIPQAAAAKYPRTIHPEGGGVPASRSLGARPAHTQSLSNFQSIKVVD
SIO_010081: Poc5
subclass of: SO_0000673
so part of: Poc5
location: complement(join(4045694..4045840,4048629..4048805,4055798..4056075,4059231..4059384,4060340..4060519,4063351..4063455,4065668..4065844,4067853..4068058,4069320..4069391,4071992..4072109,4074564..4074647))
location: region:4045694-4074647:-1
so has part: feature:4074564-4074647:-1:exon
so has part: feature:4071992-4072109:-1:exon
so has part: feature:4069320-4069391:-1:exon
so has part: feature:4067853-4068058:-1:exon
so has part: feature:4065668-4065844:-1:exon
so has part: feature:4063351-4063455:-1:exon
so has part: feature:4060340-4060519:-1:exon
so has part: feature:4059231-4059384:-1:exon
so has part: feature:4055798-4056075:-1:exon
so has part: feature:4048629-4048805:-1:exon
so has part: feature:4045694-4045840:-1:exon

XP_005356514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4074564-4074647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4071992-4072109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4069320-4069391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4067853-4068058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4065668-4065844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4063351-4063455:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4060340-4060519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4059231-4059384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4055798-4056075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4048629-4048805:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4045694-4045840:-1:exon

LOC101982310
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101982310
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4116714..>4118749)
location: region:4116714-4118749:-1
so has part: feature:4116714-4118749:-1:exon
subclass of: SO_0000010

101982310
type: Gene
SIO_000068: ncbigene

position:4116714:-1
position: 4116714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4118749:-1
position: 4118749
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4116714-4118749:-1:exon

LOC101982310
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101982310
product: centrosomal protein of 164 kDa-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783826.1
SIO_010081: LOC101982310
subclass of: SO_0000673
so part of: LOC101982310
location: complement(join(4116714..4116888,4118016..4118134,4118474..>4118749))
location: region:4116714-4118749:-1
so has part: feature:4118474-4118749:-1:exon
so has part: feature:4118016-4118134:-1:exon
so has part: feature:4116714-4116888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4118474-4118749:-1:exon

position:4118474:-1
position: 4118474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4118016-4118134:-1:exon

position:4118016:-1
position: 4118016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4118134:-1
position: 4118134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4116714-4116888:-1:exon

position:4116888:-1
position: 4116888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101982310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101982310
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 164 kDa-like
translation: RKHKAFGGLVPGVRGGRRRLAGPEYAECVSSGLQSRLLMQETQLEKKVDMLRQEKKKLLEDWDLLKSHLEDWKVICKDKEEDTSDLNSQQQQDLKRLEERLQFLLKQKEVFTPERYVAAENLQHHFKDSQMRSKSLQTDLEPTPAQDESHLQKELLEQEPPAEPQPQQLLHSNFFLKFGFPFGIGPDDD
SIO_010081: LOC101982310
subclass of: SO_0000673
so part of: LOC101982310
location: complement(join(4116714..4116888,4118016..4118134,4118474..>4118749))
location: region:4116714-4118749:-1
so has part: feature:4118474-4118749:-1:exon
so has part: feature:4118016-4118134:-1:exon
so has part: feature:4116714-4116888:-1:exon

XP_026639627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4118474-4118749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4118016-4118134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4116714-4116888:-1:exon

Sv2c
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sv2c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4359725..4547985
location: region:4359725-4547985:1
so has part: feature:4359725-4547985:1:exon
subclass of: SO_0000010

101996041
type: Gene
SIO_000068: ncbigene

position:4359725:1
position: 4359725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4547985:1
position: 4547985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4359725-4547985:1:exon

Sv2c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sv2c
product: synaptic vesicle glycoprotein 2C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005356459.3
SIO_010081: Sv2c
subclass of: SO_0000673
so part of: Sv2c
location: join(4359725..4360228,4403908..4404585,4445443..4445623,4465746..4465897,4514143..4514276,4514741..4514830,4516904..4517014,4517995..4518083,4518746..4518910,4522409..4522542,4524043..4524246,4524678..4524837,4540566..4547985)
location: region:4359725-4547985:1
so has part: feature:4359725-4360228:1:exon
so has part: feature:4403908-4404585:1:exon
so has part: feature:4445443-4445623:1:exon
so has part: feature:4465746-4465897:1:exon
so has part: feature:4514143-4514276:1:exon
so has part: feature:4514741-4514830:1:exon
so has part: feature:4516904-4517014:1:exon
so has part: feature:4517995-4518083:1:exon
so has part: feature:4518746-4518910:1:exon
so has part: feature:4522409-4522542:1:exon
so has part: feature:4524043-4524246:1:exon
so has part: feature:4524678-4524837:1:exon
so has part: feature:4540566-4547985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4359725-4360228:1:exon

position:4360228:1
position: 4360228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4403908-4404585:1:exon

position:4403908:1
position: 4403908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4404585:1
position: 4404585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4445443-4445623:1:exon

position:4445443:1
position: 4445443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4445623:1
position: 4445623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4465746-4465897:1:exon

position:4465746:1
position: 4465746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4465897:1
position: 4465897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4514143-4514276:1:exon

position:4514143:1
position: 4514143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514276:1
position: 4514276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4514741-4514830:1:exon

position:4514741:1
position: 4514741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514830:1
position: 4514830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4516904-4517014:1:exon

position:4516904:1
position: 4516904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4517014:1
position: 4517014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4517995-4518083:1:exon

position:4517995:1
position: 4517995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4518083:1
position: 4518083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4518746-4518910:1:exon

position:4518746:1
position: 4518746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4518910:1
position: 4518910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4522409-4522542:1:exon

position:4522409:1
position: 4522409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4522542:1
position: 4522542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4524043-4524246:1:exon

position:4524043:1
position: 4524043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4524246:1
position: 4524246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4524678-4524837:1:exon

position:4524678:1
position: 4524678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4524837:1
position: 4524837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4540566-4547985:1:exon

position:4540566:1
position: 4540566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sv2c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sv2c
product: synaptic vesicle glycoprotein 2C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783699.1
SIO_010081: Sv2c
subclass of: SO_0000673
so part of: Sv2c
location: join(4361414..4361433,4403908..4404585,4445443..4445623,4465746..4465897,4514143..4514276,4514741..4514830,4516904..4517014,4517995..4518083,4518746..4518910,4522409..4522542,4524043..4524246,4524678..4524837,4540566..4547985)
location: region:4361414-4547985:1
so has part: feature:4361414-4361433:1:exon
so has part: feature:4403908-4404585:1:exon
so has part: feature:4445443-4445623:1:exon
so has part: feature:4465746-4465897:1:exon
so has part: feature:4514143-4514276:1:exon
so has part: feature:4514741-4514830:1:exon
so has part: feature:4516904-4517014:1:exon
so has part: feature:4517995-4518083:1:exon
so has part: feature:4518746-4518910:1:exon
so has part: feature:4522409-4522542:1:exon
so has part: feature:4524043-4524246:1:exon
so has part: feature:4524678-4524837:1:exon
so has part: feature:4540566-4547985:1:exon

position:4361414:1
position: 4361414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4361414-4361433:1:exon

position:4361433:1
position: 4361433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4403908-4404585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4445443-4445623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4465746-4465897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4514143-4514276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4514741-4514830:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4516904-4517014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4517995-4518083:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4518746-4518910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4522409-4522542:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4524043-4524246:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4524678-4524837:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4540566-4547985:1:exon

Sv2c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sv2c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptic vesicle glycoprotein 2C
translation: MEDSYKDRTSLMKGAKDIAKEVKKQTVKKVSQAVDRAQDEYTQRSYSRFQDEEDDDDYYPPGETYSGEANDDEGSSEATEGHDEEDEIYEGEYQGIPSTNQGKDSIVSVGQPKRDEYKDRRELESERRADEEELAQQYELIIQECGHGRFQWALFFVLGMALMADGVEVFVVGFVLPSAETDLCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGFFLLCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIESDTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRENTIKLTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTKNVQKDKYANFSINFTMENQIHTGMEYDNGRFLGVKFKSVTFKDSVFKSCTFDDVTSVNTYFRNCTFIDTLFENTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITKAIPILLASTVLVCGGLVGLRLPDTRTQVLM
SIO_010081: Sv2c
subclass of: SO_0000673
so part of: Sv2c
location: join(4404006..4404585,4445443..4445623,4465746..4465897,4514143..4514276,4514741..4514830,4516904..4517014,4517995..4518083,4518746..4518910,4522409..4522542,4524043..4524246,4524678..4524837,4540566..4540749)
location: region:4404006-4540749:1
so has part: feature:4404006-4404585:1:exon
so has part: feature:4445443-4445623:1:exon
so has part: feature:4465746-4465897:1:exon
so has part: feature:4514143-4514276:1:exon
so has part: feature:4514741-4514830:1:exon
so has part: feature:4516904-4517014:1:exon
so has part: feature:4517995-4518083:1:exon
so has part: feature:4518746-4518910:1:exon
so has part: feature:4522409-4522542:1:exon
so has part: feature:4524043-4524246:1:exon
so has part: feature:4524678-4524837:1:exon
so has part: feature:4540566-4540749:1:exon

XP_026639500.1
type: Protein
SIO_000068: ncbiprotein

position:4404006:1
position: 4404006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4540749:1
position: 4540749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4404006-4404585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4445443-4445623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4465746-4465897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4514143-4514276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4514741-4514830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4516904-4517014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4517995-4518083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4518746-4518910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4522409-4522542:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4524043-4524246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4524678-4524837:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4540566-4540749:1:exon

Sv2c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sv2c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptic vesicle glycoprotein 2C
translation: MEDSYKDRTSLMKGAKDIAKEVKKQTVKKVSQAVDRAQDEYTQRSYSRFQDEEDDDDYYPPGETYSGEANDDEGSSEATEGHDEEDEIYEGEYQGIPSTNQGKDSIVSVGQPKRDEYKDRRELESERRADEEELAQQYELIIQECGHGRFQWALFFVLGMALMADGVEVFVVGFVLPSAETDLCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGFFLLCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIESDTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRENTIKLTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTKNVQKDKYANFSINFTMENQIHTGMEYDNGRFLGVKFKSVTFKDSVFKSCTFDDVTSVNTYFRNCTFIDTLFENTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITKAIPILLASTVLVCGGLVGLRLPDTRTQVLM
SIO_010081: Sv2c
subclass of: SO_0000673
so part of: Sv2c
location: join(4404006..4404585,4445443..4445623,4465746..4465897,4514143..4514276,4514741..4514830,4516904..4517014,4517995..4518083,4518746..4518910,4522409..4522542,4524043..4524246,4524678..4524837,4540566..4540749)
location: region:4404006-4540749:1
so has part: feature:4404006-4404585:1:exon
so has part: feature:4445443-4445623:1:exon
so has part: feature:4465746-4465897:1:exon
so has part: feature:4514143-4514276:1:exon
so has part: feature:4514741-4514830:1:exon
so has part: feature:4516904-4517014:1:exon
so has part: feature:4517995-4518083:1:exon
so has part: feature:4518746-4518910:1:exon
so has part: feature:4522409-4522542:1:exon
so has part: feature:4524043-4524246:1:exon
so has part: feature:4524678-4524837:1:exon
so has part: feature:4540566-4540749:1:exon

XP_005356516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4404006-4404585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4445443-4445623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4465746-4465897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4514143-4514276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4514741-4514830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4516904-4517014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4517995-4518083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4518746-4518910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4522409-4522542:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4524043-4524246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4524678-4524837:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4540566-4540749:1:exon

LOC113457202
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457202
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4597855..4598014
location: region:4597855-4598014:1
so has part: feature:4597855-4598014:1:exon
subclass of: SO_0000623

113457202
type: Gene
SIO_000068: ncbigene

position:4597855:1
position: 4597855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4598014:1
position: 4598014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4597855-4598014:1:exon

LOC113457202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457202
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377824.1
SIO_010081: LOC113457202
subclass of: SO_0000673
so part of: LOC113457202
location: 4597855..4598014
location: region:4597855-4598014:1
so has part: feature:4597855-4598014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4597855-4598014:1:exon

Iqgap2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Iqgap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4604281..4892022
location: region:4604281-4892022:1
so has part: feature:4604281-4892022:1:exon
subclass of: SO_0000010

101996608
type: Gene
SIO_000068: ncbigene

position:4604281:1
position: 4604281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4892022:1
position: 4892022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4604281-4892022:1:exon

Iqgap2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Iqgap2
product: IQ motif containing GTPase activating protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005356461.3
SIO_010081: Iqgap2
subclass of: SO_0000673
so part of: Iqgap2
location: join(4604281..4604555,4657141..4657240,4743094..4743250,4753669..4753746,4757521..4757597,4768672..4768739,4769600..4769713,4771135..4771313,4774135..4774222,4782229..4782392,4787363..4787523,4792782..4792906,4802666..4802829,4820238..4820328,4825040..4825207,4829660..4829802,4833325..4833495,4842159..4842242,4843469..4843540,4844482..4844551,4846266..4846474,4850294..4850443,4853341..4853504,4855746..4855970,4858143..4858283,4858732..4858816,4859742..4859974,4863578..4863710,4869222..4869324,4870806..4870947,4880862..4880949,4884072..4884284,4887281..4887441,4889062..4889199,4890430..4890538,4891114..4892022)
location: region:4604281-4892022:1
so has part: feature:4604281-4604555:1:exon
so has part: feature:4657141-4657240:1:exon
so has part: feature:4743094-4743250:1:exon
so has part: feature:4753669-4753746:1:exon
so has part: feature:4757521-4757597:1:exon
so has part: feature:4768672-4768739:1:exon
so has part: feature:4769600-4769713:1:exon
so has part: feature:4771135-4771313:1:exon
so has part: feature:4774135-4774222:1:exon
so has part: feature:4782229-4782392:1:exon
so has part: feature:4787363-4787523:1:exon
so has part: feature:4792782-4792906:1:exon
so has part: feature:4802666-4802829:1:exon
so has part: feature:4820238-4820328:1:exon
so has part: feature:4825040-4825207:1:exon
so has part: feature:4829660-4829802:1:exon
so has part: feature:4833325-4833495:1:exon
so has part: feature:4842159-4842242:1:exon
so has part: feature:4843469-4843540:1:exon
so has part: feature:4844482-4844551:1:exon
so has part: feature:4846266-4846474:1:exon
so has part: feature:4850294-4850443:1:exon
so has part: feature:4853341-4853504:1:exon
so has part: feature:4855746-4855970:1:exon
so has part: feature:4858143-4858283:1:exon
so has part: feature:4858732-4858816:1:exon
so has part: feature:4859742-4859974:1:exon
so has part: feature:4863578-4863710:1:exon
so has part: feature:4869222-4869324:1:exon
so has part: feature:4870806-4870947:1:exon
so has part: feature:4880862-4880949:1:exon
so has part: feature:4884072-4884284:1:exon
so has part: feature:4887281-4887441:1:exon
so has part: feature:4889062-4889199:1:exon
so has part: feature:4890430-4890538:1:exon
so has part: feature:4891114-4892022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4604281-4604555:1:exon

position:4604555:1
position: 4604555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4657141-4657240:1:exon

position:4657141:1
position: 4657141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4657240:1
position: 4657240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4743094-4743250:1:exon

position:4743094:1
position: 4743094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4743250:1
position: 4743250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4753669-4753746:1:exon

position:4753669:1
position: 4753669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4753746:1
position: 4753746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4757521-4757597:1:exon

position:4757521:1
position: 4757521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4757597:1
position: 4757597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4768672-4768739:1:exon

position:4768672:1
position: 4768672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4768739:1
position: 4768739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4769600-4769713:1:exon

position:4769600:1
position: 4769600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4769713:1
position: 4769713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4771135-4771313:1:exon

position:4771135:1
position: 4771135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4771313:1
position: 4771313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4774135-4774222:1:exon

position:4774135:1
position: 4774135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4774222:1
position: 4774222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4782229-4782392:1:exon

position:4782229:1
position: 4782229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4782392:1
position: 4782392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4787363-4787523:1:exon

position:4787363:1
position: 4787363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4787523:1
position: 4787523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4792782-4792906:1:exon

position:4792782:1
position: 4792782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4792906:1
position: 4792906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4802666-4802829:1:exon

position:4802666:1
position: 4802666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4802829:1
position: 4802829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4820238-4820328:1:exon

position:4820238:1
position: 4820238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4820328:1
position: 4820328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4825040-4825207:1:exon

position:4825040:1
position: 4825040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4825207:1
position: 4825207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4829660-4829802:1:exon

position:4829660:1
position: 4829660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4829802:1
position: 4829802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4833325-4833495:1:exon

position:4833325:1
position: 4833325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4833495:1
position: 4833495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4842159-4842242:1:exon

position:4842159:1
position: 4842159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4842242:1
position: 4842242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4843469-4843540:1:exon

position:4843469:1
position: 4843469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4843540:1
position: 4843540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4844482-4844551:1:exon

position:4844482:1
position: 4844482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4844551:1
position: 4844551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4846266-4846474:1:exon

position:4846266:1
position: 4846266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4846474:1
position: 4846474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4850294-4850443:1:exon

position:4850294:1
position: 4850294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4850443:1
position: 4850443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4853341-4853504:1:exon

position:4853341:1
position: 4853341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4853504:1
position: 4853504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4855746-4855970:1:exon

position:4855746:1
position: 4855746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4855970:1
position: 4855970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4858143-4858283:1:exon

position:4858143:1
position: 4858143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4858283:1
position: 4858283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4858732-4858816:1:exon

position:4858732:1
position: 4858732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4858816:1
position: 4858816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4859742-4859974:1:exon

position:4859742:1
position: 4859742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4859974:1
position: 4859974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4863578-4863710:1:exon

position:4863578:1
position: 4863578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4863710:1
position: 4863710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4869222-4869324:1:exon

position:4869222:1
position: 4869222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4869324:1
position: 4869324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4870806-4870947:1:exon

position:4870806:1
position: 4870806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4870947:1
position: 4870947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4880862-4880949:1:exon

position:4880862:1
position: 4880862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4880949:1
position: 4880949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4884072-4884284:1:exon

position:4884072:1
position: 4884072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4884284:1
position: 4884284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4887281-4887441:1:exon

position:4887281:1
position: 4887281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4887441:1
position: 4887441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4889062-4889199:1:exon

position:4889062:1
position: 4889062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4889199:1
position: 4889199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4890430-4890538:1:exon

position:4890430:1
position: 4890430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4890538:1
position: 4890538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:4891114-4892022:1:exon

position:4891114:1
position: 4891114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Iqgap2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Iqgap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP2 isoform X1
translation: MPHEELPSLQRPRYGSIVDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLVEELPPTTELEEGLRNGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMEAIGLPKIFYPETTDVYDRKNIPRMIYCIHALSLYLFKLGIAPQIQDLLGKVDFTEEEISNMRKELEKYGIQMPAFSKIGGILANELSVDEAALHAAVIAINEAIEKGVADQTIITLRNPNAVLTFVDDNLSQEYQKELWESKKKKEENAKLKNSCISEEERDAYEELLTQAEIQSNINAVNRLAAVDHINAVLREGDPENTLLALKKPEAQLPAVYPFAAIMYQNELFNLQKQNTSNYLAHEELLIAVEMLSAVALLNQALDSNDPVSVQNQLRSPTIGFNNLDEAHVNRYADELLSVKQEVLSQGQDTLSWNEIQNCIDMINVQIQEENDRMVALGYINEAIDEGNPLKTLDTLLLPTANIRDVDPDCAQHYQDVLFHTKSQKLLDPESVSKVLWLDEIQQAIDEANVDENRAKQWVTLVVDVNECLDRKQSEHILSVLKSSTSNTHDIIPECAIKYYDALVKAKESKTNNVSSEGSWVKLNLQQKYNYYYNTDSKEGSWVPPETYLSKESWLTAEEIEDIIEEVTANYIRENIWSASEELLRCFQATSLGPNLRKEFEARKSFLYDQEESVVKIQAFWKGCKQRQEYLSRQKVFTGNVDSIVKIQSWYRMATARKSYLSRLQYFEDHKNEIVKIQSLLRANKARDDYKALVGSENPPLTVIRKFVYLLDQSDLDFQEELEVARLREEVVTKIRANQQLEKDLNLMDIKIGLLVKNRITLEDVISHSKKLNKKKGGETEILNNTDNQGIKSLSKERRKTLETYQQLFYLLQTNPLYLAKLIFQMPQNKSTKFMDTVIFTLYNYASNQREEYLLLKLFKTALEEEIKSKVDQVQDIVTGNPTVIKMVVSFNRGARGQNTLRQLLAPVVKEIIEDKALIINTNPVEVYKAWVNQLETQTGEASKLPYDVTTEQALTYPEVKNKLEASIENLRKVTDKVLSSITSSLDLLPYGLRYIAKVLKNSIREKFPDATEEELLKIVGNLLYYRYMNPAIVAPDGFDIIDMTAGGQINSDQRRNLGSVAKVLQHAASNKLFEGENEHLSSMNNYLSETYREFRKYFQEACDVHEPEEKFNMDKYTDLVTVSKPVIYISIEEIINTHLLLLEHQDAIATEKGDLLNELLESLGEVPTVESFLGEGAVDPNDPNKENTLNQLSKTEISLSLTSKYDIKDGEAVDGRSLMIKTKKLIIDVIRNQPGSTLIEILETPATEQQELEHAKDMESRAIVDSRTPEEGKQSQAMMEDACLPLEQKKRKIQRNLRTLEQTGHVSSKNKYQDILNEIAKDIRNQRLHRKLRKAELSKLQQTLTALNKKAAFYEDQINYYDTYIKTCVDNLKRKNSRRSIKLDGKAEPKGTKRVKPVRYTAAKLHDKGVLLGIDDLQTNQFKNVTFDIIATEDVGIFDVRSKFLSVEMEKVQLNIQDLLQMQYEGVAVMKMFDKVKVNVNLLIYLLNKKFYGK
SIO_010081: Iqgap2
subclass of: SO_0000673
so part of: Iqgap2
location: join(4604510..4604555,4657141..4657240,4743094..4743250,4753669..4753746,4757521..4757597,4768672..4768739,4769600..4769713,4771135..4771313,4774135..4774222,4782229..4782392,4787363..4787523,4792782..4792906,4802666..4802829,4820238..4820328,4825040..4825207,4829660..4829802,4833325..4833495,4842159..4842242,4843469..4843540,4844482..4844551,4846266..4846474,4850294..4850443,4853341..4853504,4855746..4855970,4858143..4858283,4858732..4858816,4859742..4859974,4863578..4863710,4869222..4869324,4870806..4870947,4880862..4880949,4884072..4884284,4887281..4887441,4889062..4889199,4890430..4890538,4891114..4891227)
location: region:4604510-4891227:1
so has part: feature:4604510-4604555:1:exon
so has part: feature:4657141-4657240:1:exon
so has part: feature:4743094-4743250:1:exon
so has part: feature:4753669-4753746:1:exon
so has part: feature:4757521-4757597:1:exon
so has part: feature:4768672-4768739:1:exon
so has part: feature:4769600-4769713:1:exon
so has part: feature:4771135-4771313:1:exon
so has part: feature:4774135-4774222:1:exon
so has part: feature:4782229-4782392:1:exon
so has part: feature:4787363-4787523:1:exon
so has part: feature:4792782-4792906:1:exon
so has part: feature:4802666-4802829:1:exon
so has part: feature:4820238-4820328:1:exon
so has part: feature:4825040-4825207:1:exon
so has part: feature:4829660-4829802:1:exon
so has part: feature:4833325-4833495:1:exon
so has part: feature:4842159-4842242:1:exon
so has part: feature:4843469-4843540:1:exon
so has part: feature:4844482-4844551:1:exon
so has part: feature:4846266-4846474:1:exon
so has part: feature:4850294-4850443:1:exon
so has part: feature:4853341-4853504:1:exon
so has part: feature:4855746-4855970:1:exon
so has part: feature:4858143-4858283:1:exon
so has part: feature:4858732-4858816:1:exon
so has part: feature:4859742-4859974:1:exon
so has part: feature:4863578-4863710:1:exon
so has part: feature:4869222-4869324:1:exon
so has part: feature:4870806-4870947:1:exon
so has part: feature:4880862-4880949:1:exon
so has part: feature:4884072-4884284:1:exon
so has part: feature:4887281-4887441:1:exon
so has part: feature:4889062-4889199:1:exon
so has part: feature:4890430-4890538:1:exon
so has part: feature:4891114-4891227:1:exon

XP_005356518.1
type: Protein
SIO_000068: ncbiprotein

position:4604510:1
position: 4604510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4891227:1
position: 4891227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4604510-4604555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4657141-4657240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4743094-4743250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4753669-4753746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4757521-4757597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4768672-4768739:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4769600-4769713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4771135-4771313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4774135-4774222:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4782229-4782392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4787363-4787523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4792782-4792906:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4802666-4802829:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4820238-4820328:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4825040-4825207:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4829660-4829802:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4833325-4833495:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4842159-4842242:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4843469-4843540:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4844482-4844551:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4846266-4846474:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4850294-4850443:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4853341-4853504:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4855746-4855970:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4858143-4858283:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4858732-4858816:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4859742-4859974:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4863578-4863710:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4869222-4869324:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4870806-4870947:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4880862-4880949:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4884072-4884284:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4887281-4887441:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4889062-4889199:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4890430-4890538:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4891114-4891227:1:exon

Iqgap2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Iqgap2
product: IQ motif containing GTPase activating protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013349678.2
SIO_010081: Iqgap2
subclass of: SO_0000673
so part of: Iqgap2
location: join(4684899..4684917,4743094..4743250,4753669..4753746,4757521..4757597,4768672..4768739,4769600..4769713,4771135..4771313,4774135..4774222,4782229..4782392,4787363..4787523,4792782..4792906,4802666..4802829,4820238..4820328,4825040..4825207,4829660..4829802,4833325..4833495,4842159..4842242,4843469..4843540,4844482..4844551,4846266..4846474,4850294..4850443,4853341..4853504,4855746..4855970,4858143..4858283,4858732..4858816,4859742..4859974,4863578..4863710,4869222..4869324,4870806..4870947,4880862..4880949,4884072..4884284,4887281..4887441,4889062..4889199,4890430..4890538,4891114..4891227)
location: region:4684899-4891227:1
so has part: feature:4684899-4684917:1:exon
so has part: feature:4743094-4743250:1:exon
so has part: feature:4753669-4753746:1:exon
so has part: feature:4757521-4757597:1:exon
so has part: feature:4768672-4768739:1:exon
so has part: feature:4769600-4769713:1:exon
so has part: feature:4771135-4771313:1:exon
so has part: feature:4774135-4774222:1:exon
so has part: feature:4782229-4782392:1:exon
so has part: feature:4787363-4787523:1:exon
so has part: feature:4792782-4792906:1:exon
so has part: feature:4802666-4802829:1:exon
so has part: feature:4820238-4820328:1:exon
so has part: feature:4825040-4825207:1:exon
so has part: feature:4829660-4829802:1:exon
so has part: feature:4833325-4833495:1:exon
so has part: feature:4842159-4842242:1:exon
so has part: feature:4843469-4843540:1:exon
so has part: feature:4844482-4844551:1:exon
so has part: feature:4846266-4846474:1:exon
so has part: feature:4850294-4850443:1:exon
so has part: feature:4853341-4853504:1:exon
so has part: feature:4855746-4855970:1:exon
so has part: feature:4858143-4858283:1:exon
so has part: feature:4858732-4858816:1:exon
so has part: feature:4859742-4859974:1:exon
so has part: feature:4863578-4863710:1:exon
so has part: feature:4869222-4869324:1:exon
so has part: feature:4870806-4870947:1:exon
so has part: feature:4880862-4880949:1:exon
so has part: feature:4884072-4884284:1:exon
so has part: feature:4887281-4887441:1:exon
so has part: feature:4889062-4889199:1:exon
so has part: feature:4890430-4890538:1:exon
so has part: feature:4891114-4891227:1:exon

position:4684899:1
position: 4684899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4684899-4684917:1:exon

position:4684917:1
position: 4684917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4743094-4743250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4753669-4753746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4757521-4757597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768672-4768739:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4769600-4769713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4771135-4771313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4774135-4774222:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4782229-4782392:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4787363-4787523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4792782-4792906:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4802666-4802829:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4820238-4820328:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4825040-4825207:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4829660-4829802:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4833325-4833495:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4842159-4842242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4843469-4843540:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4844482-4844551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4846266-4846474:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4850294-4850443:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4853341-4853504:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4855746-4855970:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4858143-4858283:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4858732-4858816:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4859742-4859974:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4863578-4863710:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4869222-4869324:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4870806-4870947:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4880862-4880949:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4884072-4884284:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4887281-4887441:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4889062-4889199:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4890430-4890538:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4891114-4891227:1:exon

Iqgap2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Iqgap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP2 isoform X2
translation: MEVCLVEELPPTTELEEGLRNGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMEAIGLPKIFYPETTDVYDRKNIPRMIYCIHALSLYLFKLGIAPQIQDLLGKVDFTEEEISNMRKELEKYGIQMPAFSKIGGILANELSVDEAALHAAVIAINEAIEKGVADQTIITLRNPNAVLTFVDDNLSQEYQKELWESKKKKEENAKLKNSCISEEERDAYEELLTQAEIQSNINAVNRLAAVDHINAVLREGDPENTLLALKKPEAQLPAVYPFAAIMYQNELFNLQKQNTSNYLAHEELLIAVEMLSAVALLNQALDSNDPVSVQNQLRSPTIGFNNLDEAHVNRYADELLSVKQEVLSQGQDTLSWNEIQNCIDMINVQIQEENDRMVALGYINEAIDEGNPLKTLDTLLLPTANIRDVDPDCAQHYQDVLFHTKSQKLLDPESVSKVLWLDEIQQAIDEANVDENRAKQWVTLVVDVNECLDRKQSEHILSVLKSSTSNTHDIIPECAIKYYDALVKAKESKTNNVSSEGSWVKLNLQQKYNYYYNTDSKEGSWVPPETYLSKESWLTAEEIEDIIEEVTANYIRENIWSASEELLRCFQATSLGPNLRKEFEARKSFLYDQEESVVKIQAFWKGCKQRQEYLSRQKVFTGNVDSIVKIQSWYRMATARKSYLSRLQYFEDHKNEIVKIQSLLRANKARDDYKALVGSENPPLTVIRKFVYLLDQSDLDFQEELEVARLREEVVTKIRANQQLEKDLNLMDIKIGLLVKNRITLEDVISHSKKLNKKKGGETEILNNTDNQGIKSLSKERRKTLETYQQLFYLLQTNPLYLAKLIFQMPQNKSTKFMDTVIFTLYNYASNQREEYLLLKLFKTALEEEIKSKVDQVQDIVTGNPTVIKMVVSFNRGARGQNTLRQLLAPVVKEIIEDKALIINTNPVEVYKAWVNQLETQTGEASKLPYDVTTEQALTYPEVKNKLEASIENLRKVTDKVLSSITSSLDLLPYGLRYIAKVLKNSIREKFPDATEEELLKIVGNLLYYRYMNPAIVAPDGFDIIDMTAGGQINSDQRRNLGSVAKVLQHAASNKLFEGENEHLSSMNNYLSETYREFRKYFQEACDVHEPEEKFNMDKYTDLVTVSKPVIYISIEEIINTHLLLLEHQDAIATEKGDLLNELLESLGEVPTVESFLGEGAVDPNDPNKENTLNQLSKTEISLSLTSKYDIKDGEAVDGRSLMIKTKKLIIDVIRNQPGSTLIEILETPATEQQELEHAKDMESRAIVDSRTPEEGKQSQAMMEDACLPLEQKKRKIQRNLRTLEQTGHVSSKNKYQDILNEIAKDIRNQRLHRKLRKAELSKLQQTLTALNKKAAFYEDQINYYDTYIKTCVDNLKRKNSRRSIKLDGKAEPKGTKRVKPVRYTAAKLHDKGVLLGIDDLQTNQFKNVTFDIIATEDVGIFDVRSKFLSVEMEKVQLNIQDLLQMQYEGVAVMKMFDKVKVNVNLLIYLLNKKFYGK
SIO_010081: Iqgap2
subclass of: SO_0000673
so part of: Iqgap2
location: join(4743098..4743250,4753669..4753746,4757521..4757597,4768672..4768739,4769600..4769713,4771135..4771313,4774135..4774222,4782229..4782392,4787363..4787523,4792782..4792906,4802666..4802829,4820238..4820328,4825040..4825207,4829660..4829802,4833325..4833495,4842159..4842242,4843469..4843540,4844482..4844551,4846266..4846474,4850294..4850443,4853341..4853504,4855746..4855970,4858143..4858283,4858732..4858816,4859742..4859974,4863578..4863710,4869222..4869324,4870806..4870947,4880862..4880949,4884072..4884284,4887281..4887441,4889062..4889199,4890430..4890538,4891114..4891227)
location: region:4743098-4891227:1
so has part: feature:4743098-4743250:1:exon
so has part: feature:4753669-4753746:1:exon
so has part: feature:4757521-4757597:1:exon
so has part: feature:4768672-4768739:1:exon
so has part: feature:4769600-4769713:1:exon
so has part: feature:4771135-4771313:1:exon
so has part: feature:4774135-4774222:1:exon
so has part: feature:4782229-4782392:1:exon
so has part: feature:4787363-4787523:1:exon
so has part: feature:4792782-4792906:1:exon
so has part: feature:4802666-4802829:1:exon
so has part: feature:4820238-4820328:1:exon
so has part: feature:4825040-4825207:1:exon
so has part: feature:4829660-4829802:1:exon
so has part: feature:4833325-4833495:1:exon
so has part: feature:4842159-4842242:1:exon
so has part: feature:4843469-4843540:1:exon
so has part: feature:4844482-4844551:1:exon
so has part: feature:4846266-4846474:1:exon
so has part: feature:4850294-4850443:1:exon
so has part: feature:4853341-4853504:1:exon
so has part: feature:4855746-4855970:1:exon
so has part: feature:4858143-4858283:1:exon
so has part: feature:4858732-4858816:1:exon
so has part: feature:4859742-4859974:1:exon
so has part: feature:4863578-4863710:1:exon
so has part: feature:4869222-4869324:1:exon
so has part: feature:4870806-4870947:1:exon
so has part: feature:4880862-4880949:1:exon
so has part: feature:4884072-4884284:1:exon
so has part: feature:4887281-4887441:1:exon
so has part: feature:4889062-4889199:1:exon
so has part: feature:4890430-4890538:1:exon
so has part: feature:4891114-4891227:1:exon

XP_013205132.1
type: Protein
SIO_000068: ncbiprotein

position:4743098:1
position: 4743098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743098-4743250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4753669-4753746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4757521-4757597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4768672-4768739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4769600-4769713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4771135-4771313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4774135-4774222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4782229-4782392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4787363-4787523:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4792782-4792906:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4802666-4802829:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4820238-4820328:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4825040-4825207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4829660-4829802:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4833325-4833495:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4842159-4842242:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4843469-4843540:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4844482-4844551:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4846266-4846474:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4850294-4850443:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4853341-4853504:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4855746-4855970:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4858143-4858283:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4858732-4858816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4859742-4859974:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4863578-4863710:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4869222-4869324:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4870806-4870947:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4880862-4880949:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4884072-4884284:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4887281-4887441:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4889062-4889199:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4890430-4890538:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4891114-4891227:1:exon

F2rl2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: F2rl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4808952..4809997)
location: region:4808952-4809997:-1
so has part: feature:4808952-4809997:-1:exon
subclass of: SO_0000010

101996319
type: Gene
SIO_000068: ncbigene

position:4808952:-1
position: 4808952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4809997:-1
position: 4809997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4808952-4809997:-1:exon

F2rl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: F2rl2
product: coagulation factor II thrombin receptor like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349679.1
SIO_010081: F2rl2
subclass of: SO_0000673
so part of: F2rl2
location: complement(4808952..4809997)
location: region:4808952-4809997:-1
so has part: feature:4808952-4809997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4808952-4809997:-1:exon

F2rl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: F2rl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 3
translation: MKNIPENSAKPTLTIKTFNGEPHTFEDFPLSDIEGWTGATATVKLRCPEGSISTLRVNNATMGYLRSSLSTKLIPAIYILVFVVGVPANIVTLWKLSTRTKSICLVIFHTNLAIADLLFCVTLPFKVAYHLNGNNWVFGEAMCRITTVIFYGNMYCSILILTCMGVNRYLATVHPFMYRKLPKRNFALLMCGLVWVMVFLYMLPFAILQQEYHLVQPEITTCHDVHNTCESPSPFQFYYFISLAFFGFLVPFVVIVYCYTTLIRKLNAQDRRWLRYIKAILLILVIFTICFAPTNIILIVHHANYYYNHTDSLYFMYLIALCLGSLNSCLDPFLYFVMSKIVDQLTS
SIO_010081: F2rl2
subclass of: SO_0000673
so part of: F2rl2
location: complement(4808952..4809995)
location: region:4808952-4809995:-1
so has part: feature:4808952-4809995:-1:exon

XP_013205133.1
type: Protein
SIO_000068: ncbiprotein

position:4809995:-1
position: 4809995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4808952-4809995:-1:exon

F2r
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: F2r
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4903009..4920961
location: region:4903009-4920961:1
so has part: feature:4903009-4920961:1:exon
subclass of: SO_0000010

101996892
type: Gene
SIO_000068: ncbigene

position:4903009:1
position: 4903009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4920961:1
position: 4920961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4903009-4920961:1:exon

F2r
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: F2r
product: coagulation factor II thrombin receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005356462.3
SIO_010081: F2r
subclass of: SO_0000673
so part of: F2r
location: join(4903009..4903169,4917697..4920961)
location: region:4903009-4920961:1
so has part: feature:4903009-4903169:1:exon
so has part: feature:4917697-4920961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4903009-4903169:1:exon

position:4903169:1
position: 4903169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4917697-4920961:1:exon

position:4917697:1
position: 4917697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F2r
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: F2r
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 1
translation: MGPRRLLLFATGLSLCGPLLSSRVPVSQPDPETTDVTLNPRSFFLRNPSENAFELVPLGDEEEKNESASPEGRAIYLNKSRSPPTAPAPFISEDASGYLTSPWLTLFIPSVYTFVFVVSLPLNILAIAVFVLKMQVKKPAVVYMLHLAMADVLFVSVLPLKISYYFSGSDWQFGSGMCRFATAAFYCNMYASIMLMTVISIDRFLAVVYPIQSLSWRTLGRANFTCLVIWVMAIMGVVPLLLKEQTTKVPGLNITTCHDVLNETLLQGFYSYYFSAFSAVFFLVPLIISTVCYLSIIRCLSSSAVATRNKKSRALFLSAAVFCIFIVCFGPTNILLIVHYMLLSDSPATETAYFAYLLCVCVSSVSCCIDPLIYYYASSECQRHLYGILCCKDSSDANSYNSTGQLMPSKMDTCSSHLNNSIYKKLLA
SIO_010081: F2r
subclass of: SO_0000673
so part of: F2r
location: join(4903082..4903169,4917697..4918895)
location: region:4903082-4918895:1
so has part: feature:4903082-4903169:1:exon
so has part: feature:4917697-4918895:1:exon

XP_005356519.1
type: Protein
SIO_000068: ncbiprotein

position:4903082:1
position: 4903082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4918895:1
position: 4918895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4903082-4903169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4917697-4918895:1:exon

LOC101982594
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101982594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4942761..4947923
location: region:4942761-4947923:1
so has part: feature:4942761-4947923:1:exon

101982594
type: Gene
SIO_000068: ncbigene

position:4942761:1
position: 4942761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4947923:1
position: 4947923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4942761-4947923:1:exon

LOC101982594
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101982594
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101982594
subclass of: SO_0000673
so part of: LOC101982594
location: 4942761..4942828
location: region:4942761-4942828:1
so has part: feature:4942761-4942828:1:exon

position:4942828:1
position: 4942828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4942761-4942828:1:exon

LOC101982594
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101982594
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101982594
subclass of: SO_0000673
so part of: LOC101982594
location: 4947350..4947923
location: region:4947350-4947923:1
so has part: feature:4947350-4947923:1:exon

position:4947350:1
position: 4947350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4947350-4947923:1:exon

F2rl1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: F2rl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5010740..5020900
location: region:5010740-5020900:1
so has part: feature:5010740-5020900:1:exon
subclass of: SO_0000010

101997365
type: Gene
SIO_000068: ncbigene

position:5010740:1
position: 5010740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5020900:1
position: 5020900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5010740-5020900:1:exon

F2rl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: F2rl1
product: F2R like trypsin receptor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_005356465.2
SIO_010081: F2rl1
subclass of: SO_0000673
so part of: F2rl1
location: join(5010740..5010821,5011827..5011844,5019792..5020900)
location: region:5010740-5020900:1
so has part: feature:5010740-5010821:1:exon
so has part: feature:5011827-5011844:1:exon
so has part: feature:5019792-5020900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5010740-5010821:1:exon

position:5010821:1
position: 5010821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5011827-5011844:1:exon

position:5011827:1
position: 5011827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011844:1
position: 5011844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5019792-5020900:1:exon

position:5019792:1
position: 5019792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F2rl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: F2rl1
product: F2R like trypsin receptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_005356464.2
SIO_010081: F2rl1
subclass of: SO_0000673
so part of: F2rl1
location: join(5010740..5010821,5019792..5020900)
location: region:5010740-5020900:1
so has part: feature:5010740-5010821:1:exon
so has part: feature:5019792-5020900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5010740-5010821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5019792-5020900:1:exon

F2rl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: F2rl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 2 isoform X1
translation: MRRLSLAWLLGGVTLLAASVSCNRTFQERLAPIRPNSKGRSLIGRLNTPPPDSGKGVTVVEPGFSIDDFSTSILTGKLTSVFLPVIYTIVFVIGLPSNGMALWVFLFRTKKKHPAVIYMANLALADLLSVIWFPLKIAYHLHGNNWTYGDALCKVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMGHSRKRANIAVGLSLAIWLLIFLVTIPLYVMDQTVYIPALNVTTCHDVLPEEVLVGDMFNYFLSLAIGVFLFPALLTASAYVLMIKTLRSSAMDEHSEKKRRRAVRLIITVLAMYFICFAPSNLLLVVHYFLIKSRGQSHVYALYLVALCLSTLNSCIDPFVYYFVSQDFRDQAKNALLCRSVRTVNRMQVSLTSSKFSRKSSSYASSSTSVKTSY
SIO_010081: F2rl1
subclass of: SO_0000673
so part of: F2rl1
location: join(5010740..5010821,5011827..5011844,5019792..5020900)
location: region:5010740-5020900:1
so has part: feature:5010740-5010821:1:exon
so has part: feature:5011827-5011844:1:exon
so has part: feature:5019792-5020900:1:exon

XP_005356522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5010740-5010821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5011827-5011844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5019792-5020900:1:exon

F2rl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: F2rl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 2 isoform X2
translation: MRRLSLAWLLGGVTLLAASVSCNRTFQGPNSKGRSLIGRLNTPPPDSGKGVTVVEPGFSIDDFSTSILTGKLTSVFLPVIYTIVFVIGLPSNGMALWVFLFRTKKKHPAVIYMANLALADLLSVIWFPLKIAYHLHGNNWTYGDALCKVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMGHSRKRANIAVGLSLAIWLLIFLVTIPLYVMDQTVYIPALNVTTCHDVLPEEVLVGDMFNYFLSLAIGVFLFPALLTASAYVLMIKTLRSSAMDEHSEKKRRRAVRLIITVLAMYFICFAPSNLLLVVHYFLIKSRGQSHVYALYLVALCLSTLNSCIDPFVYYFVSQDFRDQAKNALLCRSVRTVNRMQVSLTSSKFSRKSSSYASSSTSVKTSY
SIO_010081: F2rl1
subclass of: SO_0000673
so part of: F2rl1
location: join(5010740..5010821,5019792..5020900)
location: region:5010740-5020900:1
so has part: feature:5010740-5010821:1:exon
so has part: feature:5019792-5020900:1:exon

XP_005356521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5010740-5010821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5019792-5020900:1:exon

S100z
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: S100z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5050830..5053476
location: region:5050830-5053476:1
so has part: feature:5050830-5053476:1:exon
subclass of: SO_0000010

101997855
type: Gene
SIO_000068: ncbigene

position:5050830:1
position: 5050830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5053476:1
position: 5053476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5050830-5053476:1:exon

S100z
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: S100z
product: S100 calcium binding protein Z
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_005356466.2
SIO_010081: S100z
subclass of: SO_0000673
so part of: S100z
location: join(5050830..5050970,5053318..5053476)
location: region:5050830-5053476:1
so has part: feature:5050830-5050970:1:exon
so has part: feature:5053318-5053476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5050830-5050970:1:exon

position:5050970:1
position: 5050970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5053318-5053476:1:exon

position:5053318:1
position: 5053318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

S100z
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: S100z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein S100-Z
translation: MPTQLEMAMDTMIRIFHRYSCKEGDRFKLNKGELKMLLQRELTEFLTCQKDPQLVDKIMQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK
SIO_010081: S100z
subclass of: SO_0000673
so part of: S100z
location: join(5050830..5050970,5053318..5053476)
location: region:5050830-5053476:1
so has part: feature:5050830-5050970:1:exon
so has part: feature:5053318-5053476:1:exon

XP_005356523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5050830-5050970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5053318-5053476:1:exon

Crhbp
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Crhbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5089738..5103428
location: region:5089738-5103428:1
so has part: feature:5089738-5103428:1:exon
subclass of: SO_0000010

101998146
type: Gene
SIO_000068: ncbigene

position:5089738:1
position: 5089738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5103428:1
position: 5103428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5089738-5103428:1:exon

Crhbp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Crhbp
product: corticotropin releasing hormone binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005356467.3
SIO_010081: Crhbp
subclass of: SO_0000673
so part of: Crhbp
location: join(5089738..5089988,5090329..5090422,5090709..5090866,5092527..5092737,5094614..5094762,5098848..5098965,5102794..5103428)
location: region:5089738-5103428:1
so has part: feature:5089738-5089988:1:exon
so has part: feature:5090329-5090422:1:exon
so has part: feature:5090709-5090866:1:exon
so has part: feature:5092527-5092737:1:exon
so has part: feature:5094614-5094762:1:exon
so has part: feature:5098848-5098965:1:exon
so has part: feature:5102794-5103428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5089738-5089988:1:exon

position:5089988:1
position: 5089988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5090329-5090422:1:exon

position:5090329:1
position: 5090329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5090422:1
position: 5090422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5090709-5090866:1:exon

position:5090709:1
position: 5090709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5090866:1
position: 5090866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5092527-5092737:1:exon

position:5092527:1
position: 5092527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092737:1
position: 5092737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5094614-5094762:1:exon

position:5094614:1
position: 5094614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5094762:1
position: 5094762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5098848-5098965:1:exon

position:5098848:1
position: 5098848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5098965:1
position: 5098965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5102794-5103428:1:exon

position:5102794:1
position: 5102794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Crhbp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Crhbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: corticotropin-releasing factor-binding protein
translation: MPKISAAERTSCRDKASMSRNFKLQCHFILILLTALRGESRYLEVQEAADYDPFLLFGANLKRDLAGEQPYRRALRCLDMLSLPGQFTFTADRPQLHCAVFFIGEPEEFITIHYDLVSIDCQGGDFLKVFDGWILKGEKFPSSQDHPLPTMKRYTDFCESGLTRRSVRSSQNVAMVFFRIHEPGNGFTLTTKTNPNLFPCNVISQTPSGRFTLVVPHQQKNCSFSIIYPVAIRISDLALGHWHGLQLKKPAASCGGTDDFVELLGGPGLDPSKMMPLADLCSPFHGPAQMKISCDNAVVRMVSSGKHINRVTFEYRQLEPFELETNGNSIPEFCLSSL
SIO_010081: Crhbp
subclass of: SO_0000673
so part of: Crhbp
location: join(5089857..5089988,5090329..5090422,5090709..5090866,5092527..5092737,5094614..5094762,5098848..5098965,5102794..5102948)
location: region:5089857-5102948:1
so has part: feature:5089857-5089988:1:exon
so has part: feature:5090329-5090422:1:exon
so has part: feature:5090709-5090866:1:exon
so has part: feature:5092527-5092737:1:exon
so has part: feature:5094614-5094762:1:exon
so has part: feature:5098848-5098965:1:exon
so has part: feature:5102794-5102948:1:exon

XP_005356524.1
type: Protein
SIO_000068: ncbiprotein

position:5089857:1
position: 5089857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5102948:1
position: 5102948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5089857-5089988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5090329-5090422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5090709-5090866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5092527-5092737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5094614-5094762:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5098848-5098965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5102794-5102948:1:exon

LOC101998422
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101998422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5119896..5121114
location: region:5119896-5121114:1
so has part: feature:5119896-5121114:1:exon

101998422
type: Gene
SIO_000068: ncbigene

position:5119896:1
position: 5119896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5121114:1
position: 5121114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5119896-5121114:1:exon

LOC101998422
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101998422
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101998422
subclass of: SO_0000673
so part of: LOC101998422
location: 5119896..5121114
location: region:5119896-5121114:1
so has part: feature:5119896-5121114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5119896-5121114:1:exon

Aggf1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Aggf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5157245..5184688
location: region:5157245-5184688:1
so has part: feature:5157245-5184688:1:exon
subclass of: SO_0000010

101998697
type: Gene
SIO_000068: ncbigene

position:5157245:1
position: 5157245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5184688:1
position: 5184688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5157245-5184688:1:exon

Aggf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Aggf1
product: angiogenic factor with G-patch and FHA domains 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005356468.3
SIO_010081: Aggf1
subclass of: SO_0000673
so part of: Aggf1
location: join(5157245..5157666,5160697..5160799,5161373..5161566,5162853..5163017,5163833..5164021,5166977..5167298,5168169..5168280,5168620..5168671,5173152..5173253,5174784..5174949,5175847..5175929,5180091..5180218,5181738..5181837,5183678..5184688)
location: region:5157245-5184688:1
so has part: feature:5157245-5157666:1:exon
so has part: feature:5160697-5160799:1:exon
so has part: feature:5161373-5161566:1:exon
so has part: feature:5162853-5163017:1:exon
so has part: feature:5163833-5164021:1:exon
so has part: feature:5166977-5167298:1:exon
so has part: feature:5168169-5168280:1:exon
so has part: feature:5168620-5168671:1:exon
so has part: feature:5173152-5173253:1:exon
so has part: feature:5174784-5174949:1:exon
so has part: feature:5175847-5175929:1:exon
so has part: feature:5180091-5180218:1:exon
so has part: feature:5181738-5181837:1:exon
so has part: feature:5183678-5184688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5157245-5157666:1:exon

position:5157666:1
position: 5157666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5160697-5160799:1:exon

position:5160697:1
position: 5160697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5160799:1
position: 5160799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5161373-5161566:1:exon

position:5161373:1
position: 5161373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5161566:1
position: 5161566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5162853-5163017:1:exon

position:5162853:1
position: 5162853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5163017:1
position: 5163017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5163833-5164021:1:exon

position:5163833:1
position: 5163833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5164021:1
position: 5164021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5166977-5167298:1:exon

position:5166977:1
position: 5166977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5167298:1
position: 5167298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5168169-5168280:1:exon

position:5168169:1
position: 5168169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5168280:1
position: 5168280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5168620-5168671:1:exon

position:5168620:1
position: 5168620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5168671:1
position: 5168671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5173152-5173253:1:exon

position:5173152:1
position: 5173152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5173253:1
position: 5173253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5174784-5174949:1:exon

position:5174784:1
position: 5174784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5174949:1
position: 5174949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5175847-5175929:1:exon

position:5175847:1
position: 5175847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5175929:1
position: 5175929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5180091-5180218:1:exon

position:5180091:1
position: 5180091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5180218:1
position: 5180218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5181738-5181837:1:exon

position:5181738:1
position: 5181738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5181837:1
position: 5181837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5183678-5184688:1:exon

position:5183678:1
position: 5183678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Aggf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Aggf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiogenic factor with G patch and FHA domains 1
translation: MASEAPSPPSPPPASPEPELAQLRRKVEKLERELRSCKKQVREVEKLLQHTERLYRSAESSNQELRTQVEELSKILHCGRNEDSKTSDVEVQTENQAPWSISDYYYQAYYNDDNLPSKETEPTAQQSQYVEASTKDESQVDSDSHAGTDGTDCVKCGQEDPFISDSQESASVLATEGSALEGSSLAESLRAAAEAAVSQTGFTYDENTGLYFDHSTGFYYDSENQLYYDPSTGIYYYCDVESGRYQFHSRVDLQPYQTANTKPSRDKKLKKRRKEPGSCTANDERDWSSEDQKVCNVDCINCSEEDNSANVKKKARTDTHHRSSPLMPALPVSGGTVESPGDDNSASSKDERIRESESEPEEGEITDSQSENSYDEDSTSENKESSEDSEEEEEEKIWPPCIRVIVVRSPVLQTGSLFIITAVKPATIGREKDMEHTLRIPEVGVSKFHAEICFDHDLQSYVLVDQGSQNGTVVNGKQILQPKTKSDPYVLEHGDEVKIGETVLSFHIHPGSETCDGCEPGQVRAHLRLDKKGEPFVGPALSKEEKELERRKALKKIRVKYGLQNTDYEDEKALKNPKYKDRAGKRREQVGSEGTFQRDDAPASVHSEITDSNKGRKMLEKMGWRKGEGLGKDGGGMKTPIQLQLRRTHAGLGTGKPSSIDDFHFLQNKSKKNWDKARERFAENFTDTKPLKDAAGAVPWVKGTAE
SIO_010081: Aggf1
subclass of: SO_0000673
so part of: Aggf1
location: join(5157463..5157666,5160697..5160799,5161373..5161566,5162853..5163017,5163833..5164021,5166977..5167298,5168169..5168280,5168620..5168671,5173152..5173253,5174784..5174949,5175847..5175929,5180091..5180218,5181738..5181837,5183678..5183878)
location: region:5157463-5183878:1
so has part: feature:5157463-5157666:1:exon
so has part: feature:5160697-5160799:1:exon
so has part: feature:5161373-5161566:1:exon
so has part: feature:5162853-5163017:1:exon
so has part: feature:5163833-5164021:1:exon
so has part: feature:5166977-5167298:1:exon
so has part: feature:5168169-5168280:1:exon
so has part: feature:5168620-5168671:1:exon
so has part: feature:5173152-5173253:1:exon
so has part: feature:5174784-5174949:1:exon
so has part: feature:5175847-5175929:1:exon
so has part: feature:5180091-5180218:1:exon
so has part: feature:5181738-5181837:1:exon
so has part: feature:5183678-5183878:1:exon