Microtus ochrogaster isolate Prairie Vole_2 chromosome 17, MicOch1.0, whole genome shotgun sequence.
type: Entry
definition: Microtus ochrogaster isolate Prairie Vole_2 chromosome 17, MicOch1.0, whole genome shotgun sequence.
sequence version: NC_022019.1
sequence date: 2018-10-15
sequence: sequence
division: CON
label: NC_022019.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA210839
dblink: SAMN00727831
keyword: WGS
keyword: RefSeq
source: Microtus ochrogaster (prairie vole)
organism: Microtus ochrogaster
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Arvicolinae; Microtus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001682.1.\nAssembly name: MicOch1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/12/07. The original whole-genome shotgun project has the\naccession AHZW00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: allpaths v. R41985 HAPLOIDIFY=True\n SPRS_WRITE_SEPS=True\nAssembly Name :: MicOch1.0\nGenome Coverage :: 94x\nSequencing Technology :: Illumina Hi-Seq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Microtus ochrogaster Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 35846924
topology: linear
so has quality: SO_0000987
location: 1..35846924
location: region:1-35846924:1
RO_0002162: 79684

NC_022019
type: RefSeq
SIO_000068: refseq

PRJNA210839
type: BioProject
SIO_000068: bioproject

SAMN00727831
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35846924:1
position: 35846924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35846924:1:source
so part of: sequence
organism: Microtus ochrogaster
mol type: genomic DNA
isolate: Prairie Vole_2
chromosome: 17
sex: female

79684
type: Taxonomy
SIO_000068: taxonomy

LOC101984100
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(103385..105681)
location: region:103385-105681:-1
so has part: feature:103385-105681:-1:exon

101984100
type: Gene
SIO_000068: ncbigene

position:103385:-1
position: 103385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105681:-1
position: 105681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103385-105681:-1:exon

LOC101984100
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984100
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984100
subclass of: SO_0000673
so part of: LOC101984100
location: complement(103385..105681)
location: region:103385-105681:-1
so has part: feature:103385-105681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103385-105681:-1:exon

Armh4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Armh4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123608..220096
location: region:123608-220096:1
so has part: feature:123608-220096:1:exon
subclass of: SO_0000010

101984382
type: Gene
SIO_000068: ncbigene

position:123608:1
position: 123608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220096:1
position: 220096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123608-220096:1:exon

Armh4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Armh4
product: armadillo-like helical domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783233.1
SIO_010081: Armh4
subclass of: SO_0000673
so part of: Armh4
location: join(123608..123952,133329..134700,136671..136910,138736..138930,162150..162398,219373..219507,219715..220096)
location: region:123608-220096:1
so has part: feature:123608-123952:1:exon
so has part: feature:133329-134700:1:exon
so has part: feature:136671-136910:1:exon
so has part: feature:138736-138930:1:exon
so has part: feature:162150-162398:1:exon
so has part: feature:219373-219507:1:exon
so has part: feature:219715-220096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123608-123952:1:exon

position:123952:1
position: 123952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133329-134700:1:exon

position:133329:1
position: 133329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134700:1
position: 134700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136671-136910:1:exon

position:136671:1
position: 136671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136910:1
position: 136910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:138736-138930:1:exon

position:138736:1
position: 138736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138930:1
position: 138930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162150-162398:1:exon

position:162150:1
position: 162150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162398:1
position: 162398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:219373-219507:1:exon

position:219373:1
position: 219373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219507:1
position: 219507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:219715-220096:1:exon

position:219715:1
position: 219715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Armh4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Armh4
product: armadillo-like helical domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783235.1
SIO_010081: Armh4
subclass of: SO_0000673
so part of: Armh4
location: join(123608..123952,133329..134700,136671..136910,138736..138930,162150..162398,219373..219507,219718..220096)
location: region:123608-220096:1
so has part: feature:123608-123952:1:exon
so has part: feature:133329-134700:1:exon
so has part: feature:136671-136910:1:exon
so has part: feature:138736-138930:1:exon
so has part: feature:162150-162398:1:exon
so has part: feature:219373-219507:1:exon
so has part: feature:219718-220096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123608-123952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133329-134700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136671-136910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138736-138930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162150-162398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219373-219507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219718-220096:1:exon

position:219718:1
position: 219718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Armh4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Armh4
product: armadillo-like helical domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026783234.1
SIO_010081: Armh4
subclass of: SO_0000673
so part of: Armh4
location: join(123608..123712,133329..134700,136671..136910,138736..138930,162150..162398,219373..219507,219715..220096)
location: region:123608-220096:1
so has part: feature:123608-123712:1:exon
so has part: feature:133329-134700:1:exon
so has part: feature:136671-136910:1:exon
so has part: feature:138736-138930:1:exon
so has part: feature:162150-162398:1:exon
so has part: feature:219373-219507:1:exon
so has part: feature:219715-220096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123608-123712:1:exon

position:123712:1
position: 123712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133329-134700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136671-136910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138736-138930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162150-162398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219373-219507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219715-220096:1:exon

Armh4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Armh4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo-like helical domain-containing protein 4
translation: MSRPTLLPSSVPFCSVLFLTLATQCLAFPKVEKREMAHAYAQTEQFWKMDTGDGENISAPEHMPQQTSSEAPMVLSAGPSVRPLNKVFSINKEHHRPGTGLLNPNIPDLQSSTEPAVSVSEQGHGPSQLEGMSSEQRLPKALSIIAVSSPTSLNSHQEGPQSSSSTQPIVEGITVVTRDFLKYVDNQLFATESQEAVSLGHTPSSYINTKEMLAASPRTEKAETDAAKRPTAFPGVDSTADTEHDGERPPEESDDNVQTTATTSLETTPEDVLNIDPSADSLLGDLKVTVSVSTAVLVPSVPSDEWDDTKFESVNQARTTDSGDHAEIRVSTEPPHGAQDSFEGTEGSPTSTEVNKGTPLGTALVTALEKERSPVFAHQIPFSPTSLTEDPEVSTVKPLPSAGDFTASTREDRTMLFSKTEVSTSQYESQTHQGVKDMLKDITQEMTMATQEPNPTLPLVTQEHVEVPRGSGEPEDGMPSPSPVSADVGATELSRRWESLATLASTAVVPLSLEVTSSMEDPMDTITGPNKESIPVLGSPEAPPPAVTVETPTISPALPSEGRTISPINHPDTAASYGLEQLESEELEDEEDEEDEDEEEEDEEEDEEDKETDSLYKDFDSDTELPGFTLPGITSQEPDVEAGSMALLEVATYQVPETMEWEQQNQGLGWLYVWNAGSCWGRDSWSLVHLGSTLQH
SIO_010081: Armh4
subclass of: SO_0000673
so part of: Armh4
location: join(133380..134700,136671..136910,138736..138930,162150..162398,219373..219458)
location: region:133380-219458:1
so has part: feature:133380-134700:1:exon
so has part: feature:136671-136910:1:exon
so has part: feature:138736-138930:1:exon
so has part: feature:162150-162398:1:exon
so has part: feature:219373-219458:1:exon

XP_026639034.1
type: Protein
SIO_000068: ncbiprotein

position:133380:1
position: 133380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219458:1
position: 219458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133380-134700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136671-136910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138736-138930:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162150-162398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219373-219458:1:exon

Armh4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Armh4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo-like helical domain-containing protein 4
translation: MSRPTLLPSSVPFCSVLFLTLATQCLAFPKVEKREMAHAYAQTEQFWKMDTGDGENISAPEHMPQQTSSEAPMVLSAGPSVRPLNKVFSINKEHHRPGTGLLNPNIPDLQSSTEPAVSVSEQGHGPSQLEGMSSEQRLPKALSIIAVSSPTSLNSHQEGPQSSSSTQPIVEGITVVTRDFLKYVDNQLFATESQEAVSLGHTPSSYINTKEMLAASPRTEKAETDAAKRPTAFPGVDSTADTEHDGERPPEESDDNVQTTATTSLETTPEDVLNIDPSADSLLGDLKVTVSVSTAVLVPSVPSDEWDDTKFESVNQARTTDSGDHAEIRVSTEPPHGAQDSFEGTEGSPTSTEVNKGTPLGTALVTALEKERSPVFAHQIPFSPTSLTEDPEVSTVKPLPSAGDFTASTREDRTMLFSKTEVSTSQYESQTHQGVKDMLKDITQEMTMATQEPNPTLPLVTQEHVEVPRGSGEPEDGMPSPSPVSADVGATELSRRWESLATLASTAVVPLSLEVTSSMEDPMDTITGPNKESIPVLGSPEAPPPAVTVETPTISPALPSEGRTISPINHPDTAASYGLEQLESEELEDEEDEEDEDEEEEDEEEDEEDKETDSLYKDFDSDTELPGFTLPGITSQEPDVEAGSMALLEVATYQVPETMEWEQQNQGLGWLYVWNAGSCWGRDSWSLVHLGSTLQH
SIO_010081: Armh4
subclass of: SO_0000673
so part of: Armh4
location: join(133380..134700,136671..136910,138736..138930,162150..162398,219373..219458)
location: region:133380-219458:1
so has part: feature:133380-134700:1:exon
so has part: feature:136671-136910:1:exon
so has part: feature:138736-138930:1:exon
so has part: feature:162150-162398:1:exon
so has part: feature:219373-219458:1:exon

XP_026639035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133380-134700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136671-136910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138736-138930:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162150-162398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219373-219458:1:exon

Armh4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Armh4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo-like helical domain-containing protein 4
translation: MSRPTLLPSSVPFCSVLFLTLATQCLAFPKVEKREMAHAYAQTEQFWKMDTGDGENISAPEHMPQQTSSEAPMVLSAGPSVRPLNKVFSINKEHHRPGTGLLNPNIPDLQSSTEPAVSVSEQGHGPSQLEGMSSEQRLPKALSIIAVSSPTSLNSHQEGPQSSSSTQPIVEGITVVTRDFLKYVDNQLFATESQEAVSLGHTPSSYINTKEMLAASPRTEKAETDAAKRPTAFPGVDSTADTEHDGERPPEESDDNVQTTATTSLETTPEDVLNIDPSADSLLGDLKVTVSVSTAVLVPSVPSDEWDDTKFESVNQARTTDSGDHAEIRVSTEPPHGAQDSFEGTEGSPTSTEVNKGTPLGTALVTALEKERSPVFAHQIPFSPTSLTEDPEVSTVKPLPSAGDFTASTREDRTMLFSKTEVSTSQYESQTHQGVKDMLKDITQEMTMATQEPNPTLPLVTQEHVEVPRGSGEPEDGMPSPSPVSADVGATELSRRWESLATLASTAVVPLSLEVTSSMEDPMDTITGPNKESIPVLGSPEAPPPAVTVETPTISPALPSEGRTISPINHPDTAASYGLEQLESEELEDEEDEEDEDEEEEDEEEDEEDKETDSLYKDFDSDTELPGFTLPGITSQEPDVEAGSMALLEVATYQVPETMEWEQQNQGLGWLYVWNAGSCWGRDSWSLVHLGSTLQH
SIO_010081: Armh4
subclass of: SO_0000673
so part of: Armh4
location: join(133380..134700,136671..136910,138736..138930,162150..162398,219373..219458)
location: region:133380-219458:1
so has part: feature:133380-134700:1:exon
so has part: feature:136671-136910:1:exon
so has part: feature:138736-138930:1:exon
so has part: feature:162150-162398:1:exon
so has part: feature:219373-219458:1:exon

XP_026639036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133380-134700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136671-136910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138736-138930:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162150-162398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219373-219458:1:exon

Slc35f4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Slc35f4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 369148..595999
location: region:369148-595999:1
so has part: feature:369148-595999:1:exon
subclass of: SO_0000010

101981561
type: Gene
SIO_000068: ncbigene

position:369148:1
position: 369148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595999:1
position: 595999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369148-595999:1:exon

Slc35f4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Slc35f4
product: solute carrier family 35 member F4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_026783271.1
SIO_010081: Slc35f4
subclass of: SO_0000673
so part of: Slc35f4
location: join(369148..369567,573528..573713,577557..577854,582106..582325,587834..587959,590337..590529,593592..593681,595557..595999)
location: region:369148-595999:1
so has part: feature:369148-369567:1:exon
so has part: feature:573528-573713:1:exon
so has part: feature:577557-577854:1:exon
so has part: feature:582106-582325:1:exon
so has part: feature:587834-587959:1:exon
so has part: feature:590337-590529:1:exon
so has part: feature:593592-593681:1:exon
so has part: feature:595557-595999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369148-369567:1:exon

position:369567:1
position: 369567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573528-573713:1:exon

position:573528:1
position: 573528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573713:1
position: 573713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577557-577854:1:exon

position:577557:1
position: 577557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577854:1
position: 577854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:582106-582325:1:exon

position:582106:1
position: 582106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582325:1
position: 582325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:587834-587959:1:exon

position:587834:1
position: 587834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587959:1
position: 587959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:590337-590529:1:exon

position:590337:1
position: 590337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590529:1
position: 590529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:593592-593681:1:exon

position:593592:1
position: 593592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593681:1
position: 593681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:595557-595999:1:exon

position:595557:1
position: 595557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc35f4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Slc35f4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member F4
translation: MDVKAAPNGVATIEDRILRITGYYGYYPGYSSQKSTSRSSVTRCKPGSNCPSSHSSISRQLSPLAVTEDSAAPILELQSRGPSGVCGHRVERQSRAGDDGTQTHPESSGQESRLKARCLSCTSVVLKAVWGLLIIFSVSSSWVGTTQIVKITYKNFYCPFFMTWFSTNWNIMFFPVYYSGHLATAQEKQSPMKKFRECSRIFGEDGLTLKLFLKRTAPFSILWTLTNYLYLLALKKLTATDVSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMAITGIVMMAYADNFHADSIIGVAFAVGSASTSALYKVLFKMFLGSANFGEAAHFVSTLAFFNLVFISFTPIILYFTKVEHWSSFAALPWGCLCGMAGLWLAFNILVNVGVVLTYPILISIGTVLSVPGNAAVDLVKQEVIFNVVRLAATIIICLGFLLMLLPEEWDEVTLRFINSLKEKKSEEHAEDLADVSVHLRSRSRANGTVSIPLA
SIO_010081: Slc35f4
subclass of: SO_0000673
so part of: Slc35f4
location: join(369465..369567,573528..573713,577557..577854,582106..582325,587834..587959,590337..590529,593592..593681,595557..595798)
location: region:369465-595798:1
so has part: feature:369465-369567:1:exon
so has part: feature:573528-573713:1:exon
so has part: feature:577557-577854:1:exon
so has part: feature:582106-582325:1:exon
so has part: feature:587834-587959:1:exon
so has part: feature:590337-590529:1:exon
so has part: feature:593592-593681:1:exon
so has part: feature:595557-595798:1:exon

XP_026639072.1
type: Protein
SIO_000068: ncbiprotein

position:369465:1
position: 369465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595798:1
position: 595798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369465-369567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573528-573713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577557-577854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582106-582325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587834-587959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590337-590529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593592-593681:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595557-595798:1:exon

Ccdc198
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ccdc198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 643184..664522
location: region:643184-664522:1
so has part: feature:643184-664522:1:exon
subclass of: SO_0000010

101981834
type: Gene
SIO_000068: ncbigene

position:643184:1
position: 643184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664522:1
position: 664522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643184-664522:1:exon

Ccdc198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ccdc198
product: coiled-coil domain containing 198, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005355346.2
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(643184..643553,646010..646092,654103..654189,655499..655600,657538..657697,664121..664522)
location: region:643184-664522:1
so has part: feature:643184-643553:1:exon
so has part: feature:646010-646092:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:655499-655600:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643184-643553:1:exon

position:643553:1
position: 643553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646010-646092:1:exon

position:646010:1
position: 646010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646092:1
position: 646092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654103-654189:1:exon

position:654103:1
position: 654103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654189:1
position: 654189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:655499-655600:1:exon

position:655499:1
position: 655499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655600:1
position: 655600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:657538-657697:1:exon

position:657538:1
position: 657538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657697:1
position: 657697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:664121-664522:1:exon

position:664121:1
position: 664121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ccdc198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ccdc198
product: coiled-coil domain containing 198, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013349198.1
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(643184..643553,646010..646092,654103..654189,657538..657697,664121..664522)
location: region:643184-664522:1
so has part: feature:643184-643553:1:exon
so has part: feature:646010-646092:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643184-643553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646010-646092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654103-654189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657538-657697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664121-664522:1:exon

Ccdc198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ccdc198
product: coiled-coil domain containing 198, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013349200.1
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(643185..643553,654103..654189,655499..655600,657538..657697,664121..664522)
location: region:643185-664522:1
so has part: feature:643185-643553:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:655499-655600:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664522:1:exon

position:643185:1
position: 643185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643185-643553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654103-654189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655499-655600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657538-657697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664121-664522:1:exon

Ccdc198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ccdc198
product: coiled-coil domain containing 198, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013349199.1
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(643185..643533,646010..646092,654103..654189,655499..655600,657538..657697,664121..664522)
location: region:643185-664522:1
so has part: feature:643185-643533:1:exon
so has part: feature:646010-646092:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:655499-655600:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643185-643533:1:exon

position:643533:1
position: 643533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646010-646092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654103-654189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655499-655600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657538-657697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664121-664522:1:exon

Ccdc198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ccdc198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CCDC198 isoform X1
translation: MGLGHSKHQSRVIKVTPLQSQEAETPSAGPVFYALNRNLEEKNSYPFLRLQDQNPALERQLPPLRETWYGRHPAVSRSMCLDIPLKHEESSIIKRHPPRRIQKLDPIDLPQVITSEQLLRQREARTEHKAEQEPEKKMQLPRYTSGKRQYLHKMQMLERNQRRQEAQVELMKSLQSAARLDMQKRKDHNDNKITQSLPRNDSYDVITILPDETLNRDPGSSQDEEFLDYHRENDYCVRKIGKMEAWLREQDTQGQLFWSSSSYDSDEFEKDQKRPQALVRTRTERVPLYDEFYDRE
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(643331..643553,646010..646092,654103..654189,655499..655600,657538..657697,664121..664356)
location: region:643331-664356:1
so has part: feature:643331-643553:1:exon
so has part: feature:646010-646092:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:655499-655600:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664356:1:exon

XP_005355403.1
type: Protein
SIO_000068: ncbiprotein

position:643331:1
position: 643331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664356:1
position: 664356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643331-643553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646010-646092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654103-654189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655499-655600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657538-657697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664121-664356:1:exon

Ccdc198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ccdc198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CCDC198 isoform X2
translation: MGLGHSKHQSRVIKVTPLQSQEAETPSAGPVFYALNRNLEEKNSYPFLRLQDQNPALERQLPPLRETWYGRHPAVSRSMCLDIPLKHEESSIIKRHPPRRIQKLDPIDLPQVITSEQLLRQREARTEHKAEAQVELMKSLQSAARLDMQKRKDHNDNKITQSLPRNDSYDVITILPDETLNRDPGSSQDEEFLDYHRENDYCVRKIGKMEAWLREQDTQGQLFWSSSSYDSDEFEKDQKRPQALVRTRTERVPLYDEFYDRE
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(643331..643553,646010..646092,654103..654189,657538..657697,664121..664356)
location: region:643331-664356:1
so has part: feature:643331-643553:1:exon
so has part: feature:646010-646092:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664356:1:exon

XP_013204652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:643331-643553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646010-646092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654103-654189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657538-657697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664121-664356:1:exon

Ccdc198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ccdc198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CCDC198 isoform X4
translation: MEDILQKLDPIDLPQVITSEQLLRQREARTEHKAEQEPEKKMQLPRYTSGKRQYLHKMQMLERNQRRQEAQVELMKSLQSAARLDMQKRKDHNDNKITQSLPRNDSYDVITILPDETLNRDPGSSQDEEFLDYHRENDYCVRKIGKMEAWLREQDTQGQLFWSSSSYDSDEFEKDQKRPQALVRTRTERVPLYDEFYDRE
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(643536..643553,654103..654189,655499..655600,657538..657697,664121..664356)
location: region:643536-664356:1
so has part: feature:643536-643553:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:655499-655600:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664356:1:exon

XP_013204654.1
type: Protein
SIO_000068: ncbiprotein

position:643536:1
position: 643536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643536-643553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654103-654189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655499-655600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657538-657697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664121-664356:1:exon

Ccdc198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ccdc198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CCDC198 isoform X3
translation: MCLDIPLKHEESSIIKRHPPRRIQKLDPIDLPQVITSEQLLRQREARTEHKAEQEPEKKMQLPRYTSGKRQYLHKMQMLERNQRRQEAQVELMKSLQSAARLDMQKRKDHNDNKITQSLPRNDSYDVITILPDETLNRDPGSSQDEEFLDYHRENDYCVRKIGKMEAWLREQDTQGQLFWSSSSYDSDEFEKDQKRPQALVRTRTERVPLYDEFYDRE
SIO_010081: Ccdc198
subclass of: SO_0000673
so part of: Ccdc198
location: join(646021..646092,654103..654189,655499..655600,657538..657697,664121..664356)
location: region:646021-664356:1
so has part: feature:646021-646092:1:exon
so has part: feature:654103-654189:1:exon
so has part: feature:655499-655600:1:exon
so has part: feature:657538-657697:1:exon
so has part: feature:664121-664356:1:exon

XP_013204653.1
type: Protein
SIO_000068: ncbiprotein

position:646021:1
position: 646021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646021-646092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654103-654189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655499-655600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657538-657697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664121-664356:1:exon

Naa30
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Naa30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(701147..720342)
location: region:701147-720342:-1
so has part: feature:701147-720342:-1:exon
subclass of: SO_0000010

101982115
type: Gene
SIO_000068: ncbigene

position:701147:-1
position: 701147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720342:-1
position: 720342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701147-720342:-1:exon

Naa30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Naa30
product: N(alpha)-acetyltransferase 30, NatC catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005355347.2
SIO_010081: Naa30
subclass of: SO_0000673
so part of: Naa30
location: complement(join(701147..704545,711886..711941,714486..714609,719447..720342))
location: region:701147-720342:-1
so has part: feature:719447-720342:-1:exon
so has part: feature:714486-714609:-1:exon
so has part: feature:711886-711941:-1:exon
so has part: feature:701147-704545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719447-720342:-1:exon

position:719447:-1
position: 719447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714486-714609:-1:exon

position:714486:-1
position: 714486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714609:-1
position: 714609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711886-711941:-1:exon

position:711886:-1
position: 711886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711941:-1
position: 711941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701147-704545:-1:exon

position:704545:-1
position: 704545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Naa30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Naa30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 30
translation: MASSLGCVASRMAEVPPGPSSLLPPPAPAAPAAAEPRCPFPAGAALACCSDDEEDDEEHEGGCGSPAGGEATSTAKARSCLRCPQLPPEQPQQLNGLIGPELRHLRAAATLKSKVLSAAEAAAPDGAPKVTATKGAGGHPGERAPCSAPNNARTALPGRPEAAAVAATASDPAAARNGLVEGNEPEEEEDEQVRLLASALTAGCSLRSSLGREAEPGEDRTIRYVRYESELQMPDIMRLITKDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFRRGYIAMLAVDSKYRRNGIGTNLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLGFVRDKRLFRYYLNGVDALRLKLWLR
SIO_010081: Naa30
subclass of: SO_0000673
so part of: Naa30
location: complement(join(704408..704545,711886..711941,714486..714609,719447..720244))
location: region:704408-720244:-1
so has part: feature:719447-720244:-1:exon
so has part: feature:714486-714609:-1:exon
so has part: feature:711886-711941:-1:exon
so has part: feature:704408-704545:-1:exon

XP_005355404.2
type: Protein
SIO_000068: ncbiprotein

position:704408:-1
position: 704408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720244:-1
position: 720244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719447-720244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714486-714609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711886-711941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704408-704545:-1:exon

LOC101982394
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101982394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(807892..808191)
location: region:807892-808191:-1
so has part: feature:807892-808191:-1:exon

101982394
type: Gene
SIO_000068: ncbigene

position:807892:-1
position: 807892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808191:-1
position: 808191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807892-808191:-1:exon

LOC101982394
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101982394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101982394
subclass of: SO_0000673
so part of: LOC101982394
location: complement(807892..808191)
location: region:807892-808191:-1
so has part: feature:807892-808191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807892-808191:-1:exon

Ap5m1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ap5m1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821039..851000)
location: region:821039-851000:-1
so has part: feature:821039-851000:-1:exon
subclass of: SO_0000010

101982970
type: Gene
SIO_000068: ncbigene

position:821039:-1
position: 821039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851000:-1
position: 851000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821039-851000:-1:exon

Ap5m1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ap5m1
product: adaptor related protein complex 5 subunit mu 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005355350.2
SIO_010081: Ap5m1
subclass of: SO_0000673
so part of: Ap5m1
location: complement(join(821039..822295,825667..825763,828447..828565,828656..828741,829468..829607,831531..831758,836281..836929,850692..851000))
location: region:821039-851000:-1
so has part: feature:850692-851000:-1:exon
so has part: feature:836281-836929:-1:exon
so has part: feature:831531-831758:-1:exon
so has part: feature:829468-829607:-1:exon
so has part: feature:828656-828741:-1:exon
so has part: feature:828447-828565:-1:exon
so has part: feature:825667-825763:-1:exon
so has part: feature:821039-822295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850692-851000:-1:exon

position:850692:-1
position: 850692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:836281-836929:-1:exon

position:836281:-1
position: 836281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836929:-1
position: 836929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:831531-831758:-1:exon

position:831531:-1
position: 831531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831758:-1
position: 831758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:829468-829607:-1:exon

position:829468:-1
position: 829468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829607:-1
position: 829607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:828656-828741:-1:exon

position:828656:-1
position: 828656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828741:-1
position: 828741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:828447-828565:-1:exon

position:828447:-1
position: 828447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828565:-1
position: 828565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:825667-825763:-1:exon

position:825667:-1
position: 825667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825763:-1
position: 825763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:821039-822295:-1:exon

position:822295:-1
position: 822295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ap5m1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ap5m1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-5 complex subunit mu-1
translation: MALRAVWLVRHEPGTPLGGTVRFSRRYPTVEKRAKIFNGVSYVPVPEDGPFLKALLFQLRLSGDDKDFVERRDSCSHTNKSPVYGLSVGGEELWPVIAFLRNDMIYASVPLVEQALSPRPSVVSVSGVSQGLELLFGIQDFLYSSSQKSDTDLNTKLSQLPDLLLQACPLGTLLDTNLQNSLNSTNFSSVTQPHKQPAWKVGAYKGKPQISISITEKVQCMQYGKQDAADTWQVVGTVTCKCDLEGIMPNVTISLNLPTNGSPLQDIIVHPCVTSLDSAILTASSIDTMDDSAFSGPYKFPFSPPLESFSLCHYTSPVPVPPILGSYHMKEEEVQLKITVNLKLHESVKNNFEICEAHIPFYNRGPITHLEYKVSFGQLEVYREKSLLVWIIGQKFPKSMEISLSGTLTFGAKGHNKQPFDHICIGNTAYVKLHFRISDYTLTGCYADQHSVQVFASGKPKISAYRKLISSDYYIWNSEAPAPVTYASLLP
SIO_010081: Ap5m1
subclass of: SO_0000673
so part of: Ap5m1
location: complement(join(822213..822295,825667..825763,828447..828565,828656..828741,829468..829607,831531..831758,836281..836929,850692..850765))
location: region:822213-850765:-1
so has part: feature:850692-850765:-1:exon
so has part: feature:836281-836929:-1:exon
so has part: feature:831531-831758:-1:exon
so has part: feature:829468-829607:-1:exon
so has part: feature:828656-828741:-1:exon
so has part: feature:828447-828565:-1:exon
so has part: feature:825667-825763:-1:exon
so has part: feature:822213-822295:-1:exon

XP_005355407.1
type: Protein
SIO_000068: ncbiprotein

position:822213:-1
position: 822213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850765:-1
position: 850765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850692-850765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836281-836929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831531-831758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829468-829607:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828656-828741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:828447-828565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825667-825763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822213-822295:-1:exon

Exoc5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Exoc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 851158..912849
location: region:851158-912849:1
so has part: feature:851158-912849:1:exon
subclass of: SO_0000010

101982681
type: Gene
SIO_000068: ncbigene

position:851158:1
position: 851158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912849:1
position: 912849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851158-912849:1:exon

Exoc5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Exoc5
product: exocyst complex component 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005355349.3
SIO_010081: Exoc5
subclass of: SO_0000673
so part of: Exoc5
location: join(851158..851391,873954..874048,875749..875896,878487..878681,884011..884075,885886..885914,887183..887292,888074..888118,888221..888361,888977..889059,890131..890340,891821..891968,903584..903692,906943..907063,908608..908694,909973..910081,910226..910441,911027..912849)
location: region:851158-912849:1
so has part: feature:851158-851391:1:exon
so has part: feature:873954-874048:1:exon
so has part: feature:875749-875896:1:exon
so has part: feature:878487-878681:1:exon
so has part: feature:884011-884075:1:exon
so has part: feature:885886-885914:1:exon
so has part: feature:887183-887292:1:exon
so has part: feature:888074-888118:1:exon
so has part: feature:888221-888361:1:exon
so has part: feature:888977-889059:1:exon
so has part: feature:890131-890340:1:exon
so has part: feature:891821-891968:1:exon
so has part: feature:903584-903692:1:exon
so has part: feature:906943-907063:1:exon
so has part: feature:908608-908694:1:exon
so has part: feature:909973-910081:1:exon
so has part: feature:910226-910441:1:exon
so has part: feature:911027-912849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:851158-851391:1:exon

position:851391:1
position: 851391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:873954-874048:1:exon

position:873954:1
position: 873954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874048:1
position: 874048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875749-875896:1:exon

position:875749:1
position: 875749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875896:1
position: 875896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:878487-878681:1:exon

position:878487:1
position: 878487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878681:1
position: 878681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:884011-884075:1:exon

position:884011:1
position: 884011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884075:1
position: 884075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885886-885914:1:exon

position:885886:1
position: 885886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885914:1
position: 885914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:887183-887292:1:exon

position:887183:1
position: 887183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887292:1
position: 887292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:888074-888118:1:exon

position:888074:1
position: 888074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888118:1
position: 888118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:888221-888361:1:exon

position:888221:1
position: 888221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888361:1
position: 888361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:888977-889059:1:exon

position:888977:1
position: 888977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889059:1
position: 889059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:890131-890340:1:exon

position:890131:1
position: 890131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890340:1
position: 890340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:891821-891968:1:exon

position:891821:1
position: 891821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891968:1
position: 891968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:903584-903692:1:exon

position:903584:1
position: 903584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903692:1
position: 903692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:906943-907063:1:exon

position:906943:1
position: 906943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907063:1
position: 907063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:908608-908694:1:exon

position:908608:1
position: 908608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908694:1
position: 908694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:909973-910081:1:exon

position:909973:1
position: 909973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910081:1
position: 910081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:910226-910441:1:exon

position:910226:1
position: 910226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910441:1
position: 910441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:911027-912849:1:exon

position:911027:1
position: 911027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Exoc5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Exoc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 5
translation: MATTAELFEEPFVADEYIERLVWRTPGGGSRGGSEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADVIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTNAQRRGEISRMREVAAVLLHFKGYSHCIDVYIKQCQEGAYLRNDIFEDAAILCQRVNKQVGDVFSNPEAVLAKLIQNVFEIKLQSFVRDQLEECRKSDAEQYLKSLYDLYTRTTSLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVEIGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSRNANLYFLDVVQQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEHMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFKPEDENNVLIQYTNACVKVCVYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNLKQVCSGEQLASLDKSILHSFVQLRADYRAARLARHFS
SIO_010081: Exoc5
subclass of: SO_0000673
so part of: Exoc5
location: join(851365..851391,873954..874048,875749..875896,878487..878681,884011..884075,885886..885914,887183..887292,888074..888118,888221..888361,888977..889059,890131..890340,891821..891968,903584..903692,906943..907063,908608..908694,909973..910081,910226..910441,911027..911215)
location: region:851365-911215:1
so has part: feature:851365-851391:1:exon
so has part: feature:873954-874048:1:exon
so has part: feature:875749-875896:1:exon
so has part: feature:878487-878681:1:exon
so has part: feature:884011-884075:1:exon
so has part: feature:885886-885914:1:exon
so has part: feature:887183-887292:1:exon
so has part: feature:888074-888118:1:exon
so has part: feature:888221-888361:1:exon
so has part: feature:888977-889059:1:exon
so has part: feature:890131-890340:1:exon
so has part: feature:891821-891968:1:exon
so has part: feature:903584-903692:1:exon
so has part: feature:906943-907063:1:exon
so has part: feature:908608-908694:1:exon
so has part: feature:909973-910081:1:exon
so has part: feature:910226-910441:1:exon
so has part: feature:911027-911215:1:exon

XP_005355406.1
type: Protein
SIO_000068: ncbiprotein

position:851365:1
position: 851365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911215:1
position: 911215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851365-851391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:873954-874048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875749-875896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878487-878681:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884011-884075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885886-885914:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:887183-887292:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:888074-888118:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888221-888361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888977-889059:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890131-890340:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891821-891968:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:903584-903692:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:906943-907063:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908608-908694:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:909973-910081:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:910226-910441:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:911027-911215:1:exon

LOC113457071
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457071
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 921509..921618
location: region:921509-921618:1
so has part: feature:921509-921618:1:exon

113457071
type: Gene
SIO_000068: ncbigene

position:921509:1
position: 921509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921618:1
position: 921618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921509-921618:1:exon

LOC113457071
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457071
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC113457071
subclass of: SO_0000673
so part of: LOC113457071
location: 921509..921618
location: region:921509-921618:1
so has part: feature:921509-921618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921509-921618:1:exon

LOC113456989
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113456989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1120353..1120715
location: region:1120353-1120715:1
so has part: feature:1120353-1120715:1:exon

113456989
type: Gene
SIO_000068: ncbigene

position:1120353:1
position: 1120353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120715:1
position: 1120715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120353-1120715:1:exon

LOC113456989
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113456989
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113456989
subclass of: SO_0000673
so part of: LOC113456989
location: 1120353..1120715
location: region:1120353-1120715:1
so has part: feature:1120353-1120715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1120353-1120715:1:exon

LOC101984663
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1143124..1143659
location: region:1143124-1143659:1
so has part: feature:1143124-1143659:1:exon

101984663
type: Gene
SIO_000068: ncbigene

position:1143124:1
position: 1143124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143659:1
position: 1143659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143124-1143659:1:exon

LOC101984663
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101984663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101984663
subclass of: SO_0000673
so part of: LOC101984663
location: 1143124..1143659
location: region:1143124-1143659:1
so has part: feature:1143124-1143659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1143124-1143659:1:exon

Otx2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Otx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1265621..1275096
location: region:1265621-1275096:1
so has part: feature:1265621-1275096:1:exon
subclass of: SO_0000010

101983254
type: Gene
SIO_000068: ncbigene

position:1265621:1
position: 1265621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275096:1
position: 1275096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265621-1275096:1:exon

Otx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Otx2
product: orthodenticle homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026783186.1
SIO_010081: Otx2
subclass of: SO_0000673
so part of: Otx2
location: join(1265621..1265700,1265853..1265926,1270296..1270511,1271407..1271582,1273476..1275096)
location: region:1265621-1275096:1
so has part: feature:1265621-1265700:1:exon
so has part: feature:1265853-1265926:1:exon
so has part: feature:1270296-1270511:1:exon
so has part: feature:1271407-1271582:1:exon
so has part: feature:1273476-1275096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265621-1265700:1:exon

position:1265700:1
position: 1265700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265853-1265926:1:exon

position:1265853:1
position: 1265853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265926:1
position: 1265926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1270296-1270511:1:exon

position:1270296:1
position: 1270296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270511:1
position: 1270511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271407-1271582:1:exon

position:1271407:1
position: 1271407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271582:1
position: 1271582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1273476-1275096:1:exon

position:1273476:1
position: 1273476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Otx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Otx2
product: orthodenticle homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005355354.3
SIO_010081: Otx2
subclass of: SO_0000673
so part of: Otx2
location: join(1265621..1265700,1265853..1265926,1270296..1270511,1271431..1271582,1273476..1275096)
location: region:1265621-1275096:1
so has part: feature:1265621-1265700:1:exon
so has part: feature:1265853-1265926:1:exon
so has part: feature:1270296-1270511:1:exon
so has part: feature:1271431-1271582:1:exon
so has part: feature:1273476-1275096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265621-1265700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265853-1265926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1270296-1270511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271431-1271582:1:exon

position:1271431:1
position: 1271431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1273476-1275096:1:exon

Otx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Otx2
product: orthodenticle homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026783187.1
SIO_010081: Otx2
subclass of: SO_0000673
so part of: Otx2
location: join(1267977..1268103,1270296..1270511,1271407..1271582,1273476..1275096)
location: region:1267977-1275096:1
so has part: feature:1267977-1268103:1:exon
so has part: feature:1270296-1270511:1:exon
so has part: feature:1271407-1271582:1:exon
so has part: feature:1273476-1275096:1:exon

position:1267977:1
position: 1267977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267977-1268103:1:exon

position:1268103:1
position: 1268103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1270296-1270511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271407-1271582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1273476-1275096:1:exon

Otx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Otx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein OTX2 isoform X1
translation: MMSYLKQPPYAVNGLSLTTSGMDLLHPSVGYPGPWASCPAATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASISPLSDPLSTSSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSYLTPMHHQLPGPGATLSPMGTNAVTSHLNQSPASLSTQGYGASSLGFNSTTDCLDYKDQTASWKLNFNADCLDYKDQTSSWKFQVL
SIO_010081: Otx2
subclass of: SO_0000673
so part of: Otx2
location: join(1270415..1270511,1271407..1271582,1273476..1274096)
location: region:1270415-1274096:1
so has part: feature:1270415-1270511:1:exon
so has part: feature:1271407-1271582:1:exon
so has part: feature:1273476-1274096:1:exon

XP_026638987.1
type: Protein
SIO_000068: ncbiprotein

position:1270415:1
position: 1270415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274096:1
position: 1274096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270415-1270511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271407-1271582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1273476-1274096:1:exon

Otx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Otx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein OTX2 isoform X1
translation: MMSYLKQPPYAVNGLSLTTSGMDLLHPSVGYPGPWASCPAATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASISPLSDPLSTSSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSYLTPMHHQLPGPGATLSPMGTNAVTSHLNQSPASLSTQGYGASSLGFNSTTDCLDYKDQTASWKLNFNADCLDYKDQTSSWKFQVL
SIO_010081: Otx2
subclass of: SO_0000673
so part of: Otx2
location: join(1270415..1270511,1271407..1271582,1273476..1274096)
location: region:1270415-1274096:1
so has part: feature:1270415-1270511:1:exon
so has part: feature:1271407-1271582:1:exon
so has part: feature:1273476-1274096:1:exon

XP_026638988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1270415-1270511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271407-1271582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1273476-1274096:1:exon

Otx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Otx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein OTX2 isoform X2
translation: MMSYLKQPPYAVNGLSLTTSGMDLLHPSVGYPATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASISPLSDPLSTSSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSYLTPMHHQLPGPGATLSPMGTNAVTSHLNQSPASLSTQGYGASSLGFNSTTDCLDYKDQTASWKLNFNADCLDYKDQTSSWKFQVL
SIO_010081: Otx2
subclass of: SO_0000673
so part of: Otx2
location: join(1270415..1270511,1271431..1271582,1273476..1274096)
location: region:1270415-1274096:1
so has part: feature:1270415-1270511:1:exon
so has part: feature:1271431-1271582:1:exon
so has part: feature:1273476-1274096:1:exon

XP_005355411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1270415-1270511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271431-1271582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1273476-1274096:1:exon

LOC113457058
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457058
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1280107..1280213)
location: region:1280107-1280213:-1
so has part: feature:1280107-1280213:-1:exon
subclass of: SO_0000623

113457058
type: Gene
SIO_000068: ncbigene

position:1280107:-1
position: 1280107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280213:-1
position: 1280213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280107-1280213:-1:exon

LOC113457058
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457058
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377706.1
SIO_010081: LOC113457058
subclass of: SO_0000673
so part of: LOC113457058
location: complement(1280107..1280213)
location: region:1280107-1280213:-1
so has part: feature:1280107-1280213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1280107-1280213:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 79684
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1332533..1332632
location: region:1332533-1332632:1
so has part: feature:1332533-1332632:1:region

position:1332533:1
position: 1332533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332632:1
position: 1332632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332533-1332632:1:region

LOC101984958
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101984958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1350285..1350835
location: region:1350285-1350835:1
so has part: feature:1350285-1350835:1:exon
subclass of: SO_0000010

101984958
type: Gene
SIO_000068: ncbigene

position:1350285:1
position: 1350285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350835:1
position: 1350835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350285-1350835:1:exon

LOC101984958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101984958
product: dynein light chain 1, cytoplasmic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005355356.3
SIO_010081: LOC101984958
subclass of: SO_0000673
so part of: LOC101984958
location: 1350285..1350835
location: region:1350285-1350835:1
so has part: feature:1350285-1350835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350285-1350835:1:exon

LOC101984958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101984958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 1, cytoplasmic-like
translation: MCDQKAVIKNADMSEEIQQDSVECTTQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
SIO_010081: LOC101984958
subclass of: SO_0000673
so part of: LOC101984958
location: 1350373..1350642
location: region:1350373-1350642:1
so has part: feature:1350373-1350642:1:exon

XP_005355413.1
type: Protein
SIO_000068: ncbiprotein

position:1350373:1
position: 1350373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350642:1
position: 1350642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350373-1350642:1:exon

Atg14
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Atg14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1381976..1411409
location: region:1381976-1411409:1
so has part: feature:1381976-1411409:1:exon
subclass of: SO_0000010

101985250
type: Gene
SIO_000068: ncbigene

position:1381976:1
position: 1381976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411409:1
position: 1411409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381976-1411409:1:exon

Atg14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atg14
product: autophagy related 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005355357.2
SIO_010081: Atg14
subclass of: SO_0000673
so part of: Atg14
location: join(1381976..1382196,1393168..1393230,1395087..1395129,1397980..1398061,1400657..1400894,1402842..1403071,1404074..1404191,1405404..1405494,1405572..1405657,1409196..1411409)
location: region:1381976-1411409:1
so has part: feature:1381976-1382196:1:exon
so has part: feature:1393168-1393230:1:exon
so has part: feature:1395087-1395129:1:exon
so has part: feature:1397980-1398061:1:exon
so has part: feature:1400657-1400894:1:exon
so has part: feature:1402842-1403071:1:exon
so has part: feature:1404074-1404191:1:exon
so has part: feature:1405404-1405494:1:exon
so has part: feature:1405572-1405657:1:exon
so has part: feature:1409196-1411409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1381976-1382196:1:exon

position:1382196:1
position: 1382196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1393168-1393230:1:exon

position:1393168:1
position: 1393168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393230:1
position: 1393230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1395087-1395129:1:exon

position:1395087:1
position: 1395087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395129:1
position: 1395129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1397980-1398061:1:exon

position:1397980:1
position: 1397980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398061:1
position: 1398061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1400657-1400894:1:exon

position:1400657:1
position: 1400657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400894:1
position: 1400894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1402842-1403071:1:exon

position:1402842:1
position: 1402842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403071:1
position: 1403071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1404074-1404191:1:exon

position:1404074:1
position: 1404074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404191:1
position: 1404191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1405404-1405494:1:exon

position:1405404:1
position: 1405404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405494:1
position: 1405494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1405572-1405657:1:exon

position:1405572:1
position: 1405572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405657:1
position: 1405657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1409196-1411409:1:exon

position:1409196:1
position: 1409196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Atg14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atg14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beclin 1-associated autophagy-related key regulator
translation: MASPSGKGSWTPEAPGFGPRALARDLVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCIQSGDFVYFDGRDKERFIDKKERLNQLKSKQEAFQKEVLKAMEGKQLTDQLRWKIMSCKMRIEQLKQTICKGNEETKKNSEGLLKNKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLKSHYERLACLRRSRILELTSVIFPMDEVKTSVRDPADVSSESDSAMTSSMVSKLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYNWVEEKKTTQGPDMEHNNPAYTISAALCYATQLVNIVSHILDINLPKKLCNSEFCGENLSKQRLTRAVRRLNTNILYLCSSQHVNLDQLQPLHTLRNLMHLVSPHSEHLGRSGPFEVRADLEESMEFVDPGVAGESDVSGDERVSDEETDLGTDWENLPSPRFCDIPSQPVEVSQSQSTQASPPIASSSAGGMISSAAASVTSWFKAYTGHR
SIO_010081: Atg14
subclass of: SO_0000673
so part of: Atg14
location: join(1381976..1382196,1393168..1393230,1395087..1395129,1397980..1398061,1400657..1400894,1402842..1403071,1404074..1404191,1405404..1405494,1405572..1405657,1409196..1409502)
location: region:1381976-1409502:1
so has part: feature:1381976-1382196:1:exon
so has part: feature:1393168-1393230:1:exon
so has part: feature:1395087-1395129:1:exon
so has part: feature:1397980-1398061:1:exon
so has part: feature:1400657-1400894:1:exon
so has part: feature:1402842-1403071:1:exon
so has part: feature:1404074-1404191:1:exon
so has part: feature:1405404-1405494:1:exon
so has part: feature:1405572-1405657:1:exon
so has part: feature:1409196-1409502:1:exon

XP_005355414.1
type: Protein
SIO_000068: ncbiprotein

position:1409502:1
position: 1409502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381976-1382196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1393168-1393230:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1395087-1395129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397980-1398061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1400657-1400894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1402842-1403071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1404074-1404191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1405404-1405494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1405572-1405657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1409196-1409502:1:exon

Fbxo34
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fbxo34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1420450..1423201)
location: region:1420450-1423201:-1
so has part: feature:1420450-1423201:-1:exon
subclass of: SO_0000010

101985536
type: Gene
SIO_000068: ncbigene

position:1420450:-1
position: 1420450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1423201:-1
position: 1423201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420450-1423201:-1:exon

Fbxo34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fbxo34
product: F-box protein 34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005355358.2
SIO_010081: Fbxo34
subclass of: SO_0000673
so part of: Fbxo34
location: complement(1420450..1423201)
location: region:1420450-1423201:-1
so has part: feature:1420450-1423201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420450-1423201:-1:exon

Fbxo34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fbxo34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 34
translation: MSARTLRRAASHQSAVSDEKDRTNYMKPAVFPSASPVKATSRKPFGILSPNVLCSMSGKSPVENSLNVKAKKNVPSATVHQSEEEGLPGSWAIVKPGNTKEKIAFFAAHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQLERMRELNSQCCQPEPFACGIEHCSVHYVGDGGDGVHSGRPLSVIQMVAFLEQRASALLASCAKNCTNSPAIVKITGQSRGLPPAPEPFSALGTCEEPTERGNPEAGRSQSEPVRVLDMVARLESECLKHQGQREPGTLSRNNSFRRNVGRVLLTNGAQANDKDDKSTTDAPDTHAHPMQLVSVGEGPSTADHCSVGGQAWDGMSQGCPSLPAVVSFQMDSTELEPGQQTAVRNCNQHDIEMTDALDEPSFSSHTCLQAAEVPSDAVRCMSQALGPLTKPSPAQRKETVCMSITVCTVETAQPSAVDAREEPLPGMLFFLSPGRDQPECSQLKEHTTQKASEANNPQDAAEGNSVCEEKDASVEPFVPAASAGESTFPVLEASSWKKQVSQDFLETRFKIQQLLEPQQYMVCLPHHIMVRIFRLLPTRSLAVLKCTCRYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGYWMCCHRSQKAFPGCKLGLHDNHWLPACHSFNRAIHKKSRGSETEEEC
SIO_010081: Fbxo34
subclass of: SO_0000673
so part of: Fbxo34
location: complement(1421120..1423198)
location: region:1421120-1423198:-1
so has part: feature:1421120-1423198:-1:exon

XP_005355415.1
type: Protein
SIO_000068: ncbiprotein

position:1421120:-1
position: 1421120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1423198:-1
position: 1423198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421120-1423198:-1:exon

LOC113457005
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1423308..1480074)
location: region:1423308-1480074:-1
so has part: feature:1423308-1480074:-1:exon
subclass of: SO_0000011

113457005
type: Gene
SIO_000068: ncbigene

position:1423308:-1
position: 1423308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480074:-1
position: 1480074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423308-1480074:-1:exon

LOC113457005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457005
product: uncharacterized LOC113457005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003377667.1
SIO_010081: LOC113457005
subclass of: SO_0000673
so part of: LOC113457005
location: complement(join(1423308..1423326,1428838..1428942,1479946..1480074))
location: region:1423308-1480074:-1
so has part: feature:1479946-1480074:-1:exon
so has part: feature:1428838-1428942:-1:exon
so has part: feature:1423308-1423326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479946-1480074:-1:exon

position:1479946:-1
position: 1479946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1428838-1428942:-1:exon

position:1428838:-1
position: 1428838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428942:-1
position: 1428942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1423308-1423326:-1:exon

position:1423326:-1
position: 1423326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dlgap5
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Dlgap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1539457..1578560
location: region:1539457-1578560:1
so has part: feature:1539457-1578560:1:exon
subclass of: SO_0000010

101994575
type: Gene
SIO_000068: ncbigene

position:1539457:1
position: 1539457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578560:1
position: 1578560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1539457-1578560:1:exon

Dlgap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Dlgap5
product: DLG associated protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005355392.3
SIO_010081: Dlgap5
subclass of: SO_0000673
so part of: Dlgap5
location: join(1539457..1539564,1542475..1542710,1545609..1545802,1545958..1546020,1546494..1546578,1546671..1546790,1555059..1555129,1556223..1556488,1557450..1557562,1558078..1558177,1561226..1561311,1562121..1562281,1568551..1568770,1570560..1570743,1572730..1572790,1574050..1574275,1575583..1575629,1578205..1578560)
location: region:1539457-1578560:1
so has part: feature:1539457-1539564:1:exon
so has part: feature:1542475-1542710:1:exon
so has part: feature:1545609-1545802:1:exon
so has part: feature:1545958-1546020:1:exon
so has part: feature:1546494-1546578:1:exon
so has part: feature:1546671-1546790:1:exon
so has part: feature:1555059-1555129:1:exon
so has part: feature:1556223-1556488:1:exon
so has part: feature:1557450-1557562:1:exon
so has part: feature:1558078-1558177:1:exon
so has part: feature:1561226-1561311:1:exon
so has part: feature:1562121-1562281:1:exon
so has part: feature:1568551-1568770:1:exon
so has part: feature:1570560-1570743:1:exon
so has part: feature:1572730-1572790:1:exon
so has part: feature:1574050-1574275:1:exon
so has part: feature:1575583-1575629:1:exon
so has part: feature:1578205-1578560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1539457-1539564:1:exon

position:1539564:1
position: 1539564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1542475-1542710:1:exon

position:1542475:1
position: 1542475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542710:1
position: 1542710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1545609-1545802:1:exon

position:1545609:1
position: 1545609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545802:1
position: 1545802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1545958-1546020:1:exon

position:1545958:1
position: 1545958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546020:1
position: 1546020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1546494-1546578:1:exon

position:1546494:1
position: 1546494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546578:1
position: 1546578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1546671-1546790:1:exon

position:1546671:1
position: 1546671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546790:1
position: 1546790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1555059-1555129:1:exon

position:1555059:1
position: 1555059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555129:1
position: 1555129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1556223-1556488:1:exon

position:1556223:1
position: 1556223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556488:1
position: 1556488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1557450-1557562:1:exon

position:1557450:1
position: 1557450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557562:1
position: 1557562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1558078-1558177:1:exon

position:1558078:1
position: 1558078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558177:1
position: 1558177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1561226-1561311:1:exon

position:1561226:1
position: 1561226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561311:1
position: 1561311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1562121-1562281:1:exon

position:1562121:1
position: 1562121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562281:1
position: 1562281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1568551-1568770:1:exon

position:1568551:1
position: 1568551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568770:1
position: 1568770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1570560-1570743:1:exon

position:1570560:1
position: 1570560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570743:1
position: 1570743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1572730-1572790:1:exon

position:1572730:1
position: 1572730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572790:1
position: 1572790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1574050-1574275:1:exon

position:1574050:1
position: 1574050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574275:1
position: 1574275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1575583-1575629:1:exon

position:1575583:1
position: 1575583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575629:1
position: 1575629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1578205-1578560:1:exon

position:1578205:1
position: 1578205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dlgap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Dlgap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 5
translation: MPLSHFASRLRKDLSTEMIRTSIAHRKSLSQKENRHKVYERNRHFGLRDVNIPLEGRDLVNIPELPQSLAPEKASSKTKSEKMVLSDQRKQLLQKYKEEKHLQKLKEQREKAKRGVFKVGLYRPDAPGFLVTDNRSVKAEPEKAFSYTGRITRSKAKDHMEHTKIDSKNALQAARFGQKQTSEKKIPDKERKAVQSMVSSGKMTGAAATQRTKQMTRAVPSATSKPVSRVAGENESERVGPGRGRPARKVDAKPDKVIPSKGASEENRVGPQSSVTSGTGQHGVFPAVGNLPRTVPAKAKQRNSFAPEHCVFQPPRGLKTYPVALTCHRSDHALLTPWSPLKLDGSTTQDSANGPLVQTSVSVQQESNNVEQDFASPAACDEEHVLNQKEAPATNSSRLSEDGATSQPQHDVPYFRTILQSETDRLTSHCLEWDRKLDLDIPDDAKDLIRTTVGQTRLLIMERFKQFEGLIDNCEYKRGEKETTCSDLDGFWDMVNFQKKIVPGGTNRTKQDDAGRLAARNRLAAIKNAMKARLKQEEHAPVAAVETPKEVDKIVFDAGFFRIESPVKSFSALSSERRSQRFGAVIPASRVMPESGAAGDLQRQRRSLENPDPQSSKCEGVNKTLFSDTLESRSSRADDTWCPGEQESSALDHVVNKINVEMDCFPAEVMNLPLPAGRVAGDTKQREVHSDVEGVELQSTSQDVLMSDPEKSSPSPDASEEDSRVSQSEPLHRQLNCEPQLLDPPALSNASPCTQVESRQQGRARHISFGGDLIVFSPVRLRSQEHQEGF
SIO_010081: Dlgap5
subclass of: SO_0000673
so part of: Dlgap5
location: join(1542476..1542710,1545609..1545802,1545958..1546020,1546494..1546578,1546671..1546790,1555059..1555129,1556223..1556488,1557450..1557562,1558078..1558177,1561226..1561311,1562121..1562281,1568551..1568770,1570560..1570743,1572730..1572790,1574050..1574275,1575583..1575629,1578205..1578345)
location: region:1542476-1578345:1
so has part: feature:1542476-1542710:1:exon
so has part: feature:1545609-1545802:1:exon
so has part: feature:1545958-1546020:1:exon
so has part: feature:1546494-1546578:1:exon
so has part: feature:1546671-1546790:1:exon
so has part: feature:1555059-1555129:1:exon
so has part: feature:1556223-1556488:1:exon
so has part: feature:1557450-1557562:1:exon
so has part: feature:1558078-1558177:1:exon
so has part: feature:1561226-1561311:1:exon
so has part: feature:1562121-1562281:1:exon
so has part: feature:1568551-1568770:1:exon
so has part: feature:1570560-1570743:1:exon
so has part: feature:1572730-1572790:1:exon
so has part: feature:1574050-1574275:1:exon
so has part: feature:1575583-1575629:1:exon
so has part: feature:1578205-1578345:1:exon

XP_005355449.1
type: Protein
SIO_000068: ncbiprotein

position:1542476:1
position: 1542476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578345:1
position: 1578345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542476-1542710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1545609-1545802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1545958-1546020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1546494-1546578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1546671-1546790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1555059-1555129:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1556223-1556488:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1557450-1557562:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1558078-1558177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1561226-1561311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1562121-1562281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1568551-1568770:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1570560-1570743:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572730-1572790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1574050-1574275:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1575583-1575629:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1578205-1578345:1:exon

Lgals3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Lgals3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1578982..1591024)
location: region:1578982-1591024:-1
so has part: feature:1578982-1591024:-1:exon
subclass of: SO_0000010

101985818
type: Gene
SIO_000068: ncbigene

position:1578982:-1
position: 1578982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591024:-1
position: 1591024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578982-1591024:-1:exon

Lgals3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Lgals3
product: galectin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005355359.3
SIO_010081: Lgals3
subclass of: SO_0000673
so part of: Lgals3
location: complement(join(1578982..1579258,1579967..1580132,1582855..1582943,1584092..1584403,1584906..1584927,1590973..1591024))
location: region:1578982-1591024:-1
so has part: feature:1590973-1591024:-1:exon
so has part: feature:1584906-1584927:-1:exon
so has part: feature:1584092-1584403:-1:exon
so has part: feature:1582855-1582943:-1:exon
so has part: feature:1579967-1580132:-1:exon
so has part: feature:1578982-1579258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1590973-1591024:-1:exon

position:1590973:-1
position: 1590973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1584906-1584927:-1:exon

position:1584906:-1
position: 1584906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584927:-1
position: 1584927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1584092-1584403:-1:exon

position:1584092:-1
position: 1584092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584403:-1
position: 1584403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1582855-1582943:-1:exon

position:1582855:-1
position: 1582855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582943:-1
position: 1582943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1579967-1580132:-1:exon

position:1579967:-1
position: 1579967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580132:-1
position: 1580132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1578982-1579258:-1:exon

position:1579258:-1
position: 1579258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lgals3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Lgals3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galectin-3
translation: MADSFSLNDALAGPGNPNRQGWPGAWGNQPGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGPTAPGAYPGSTAPGAFPGQPGGSGAYPSAPGAYPAAAPYGAPTGALTVPYELPFPGGVMPRMLITIMGTVKPHANKITLNFKRGNDIAFHFNPRFNENNRRVIVCNTKQANNWGKEERQSAFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRMRNLREINQMEISGDITLTSAVPTMI
SIO_010081: Lgals3
subclass of: SO_0000673
so part of: Lgals3
location: complement(join(1579103..1579258,1579967..1580132,1582855..1582943,1584092..1584403,1584906..1584923))
location: region:1579103-1584923:-1
so has part: feature:1584906-1584923:-1:exon
so has part: feature:1584092-1584403:-1:exon
so has part: feature:1582855-1582943:-1:exon
so has part: feature:1579967-1580132:-1:exon
so has part: feature:1579103-1579258:-1:exon

XP_005355416.1
type: Protein
SIO_000068: ncbiprotein

position:1579103:-1
position: 1579103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584923:-1
position: 1584923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1584906-1584923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1584092-1584403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1582855-1582943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1579967-1580132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579103-1579258:-1:exon

Mapk1ip1l
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mapk1ip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1647717..1666512)
location: region:1647717-1666512:-1
so has part: feature:1647717-1666512:-1:exon
subclass of: SO_0000010

101986091
type: Gene
SIO_000068: ncbigene

position:1647717:-1
position: 1647717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666512:-1
position: 1666512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1647717-1666512:-1:exon

Mapk1ip1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mapk1ip1l
product: mitogen-activated protein kinase 1 interacting protein 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_013349211.1
SIO_010081: Mapk1ip1l
subclass of: SO_0000673
so part of: Mapk1ip1l
location: complement(join(1647717..1650348,1656852..1657541,1658745..1658767,1666411..1666512))
location: region:1647717-1666512:-1
so has part: feature:1666411-1666512:-1:exon
so has part: feature:1658745-1658767:-1:exon
so has part: feature:1656852-1657541:-1:exon
so has part: feature:1647717-1650348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666411-1666512:-1:exon

position:1666411:-1
position: 1666411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1658745-1658767:-1:exon

position:1658745:-1
position: 1658745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658767:-1
position: 1658767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1656852-1657541:-1:exon

position:1656852:-1
position: 1656852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657541:-1
position: 1657541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1647717-1650348:-1:exon

position:1650348:-1
position: 1650348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mapk1ip1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mapk1ip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAPK-interacting and spindle-stabilizing protein-like
translation: MSDEFSLADALPEPSSAKTSAVSNAKAGQSQVWPGSNPWSNPSALPAVPSGLPPSGAAPSPVPFGPAPTGMYPSMPPTGPPAGPPAPFPPSGPSCPPPSGPYPAPAVPGPGPTGPYATPNMPLPELPRPYGAPTDPAGTLGPWGSMSSGPWAPGIGGQHPNMPYRPPGPYPTAPPPMSGAPPVPWGTVPPGAWGPPAPYPGPAGSYPTPGPHPTPNNPYQVPSGPSGAPPMPSGPHYH
SIO_010081: Mapk1ip1l
subclass of: SO_0000673
so part of: Mapk1ip1l
location: complement(join(1650340..1650348,1656852..1657541,1658745..1658762))
location: region:1650340-1658762:-1
so has part: feature:1658745-1658762:-1:exon
so has part: feature:1656852-1657541:-1:exon
so has part: feature:1650340-1650348:-1:exon

XP_013204665.1
type: Protein
SIO_000068: ncbiprotein

position:1650340:-1
position: 1650340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658762:-1
position: 1658762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1658745-1658762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1656852-1657541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1650340-1650348:-1:exon

Socs4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Socs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1673949..1689248)
location: region:1673949-1689248:-1
so has part: feature:1673949-1689248:-1:exon
subclass of: SO_0000010

101986379
type: Gene
SIO_000068: ncbigene

position:1673949:-1
position: 1673949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689248:-1
position: 1689248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673949-1689248:-1:exon

Socs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Socs4
product: suppressor of cytokine signaling 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005355361.2
SIO_010081: Socs4
subclass of: SO_0000673
so part of: Socs4
location: complement(join(1673949..1676757,1689044..1689248))
location: region:1673949-1689248:-1
so has part: feature:1689044-1689248:-1:exon
so has part: feature:1673949-1676757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1689044-1689248:-1:exon

position:1689044:-1
position: 1689044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1673949-1676757:-1:exon

position:1676757:-1
position: 1676757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Socs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Socs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 4
translation: MAENNSKNVDVRPKTGRSRSADRKDGYVWSGRKLSWSGKTESCSEWETIDPEEKARAPRRSQERDSCSPIDLDLDNSCGHRFLGRSLKQKLQDAVGQCFPIKNCSGRHSTGLPSKRKIHIGELMLDKCPFPPPSDLAFRWHFIKRHTGPVGPKSDEWVSTDLPGSKLRDAQLKQRNMEEDMPCFSHTSIQPCVITTNSASCRDAHITGSLMNLVTNDSIEDSDMDSEDEIITLCTSSRKRNKPRWEMDDAILQLEAPPKHHPQLDYVHCLVPDLLQISNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSPMKLYLKEYHYKSKVRLLRIGVPEQQ
SIO_010081: Socs4
subclass of: SO_0000673
so part of: Socs4
location: complement(1675357..1676664)
location: region:1675357-1676664:-1
so has part: feature:1675357-1676664:-1:exon

XP_005355418.1
type: Protein
SIO_000068: ncbiprotein

position:1675357:-1
position: 1675357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676664:-1
position: 1676664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675357-1676664:-1:exon

Wdhd1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Wdhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1689401..1728107
location: region:1689401-1728107:1
so has part: feature:1689401-1728107:1:exon
subclass of: SO_0000010

101986665
type: Gene
SIO_000068: ncbigene

position:1689401:1
position: 1689401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728107:1
position: 1728107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689401-1728107:1:exon

Wdhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Wdhd1
product: WD repeat and HMG-box DNA binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005355362.2
SIO_010081: Wdhd1
subclass of: SO_0000673
so part of: Wdhd1
location: join(1689401..1689720,1694553..1694664,1696289..1696440,1697230..1697341,1697506..1697556,1698406..1698501,1701774..1701866,1703640..1703746,1704200..1704341,1706509..1706725,1707724..1707905,1709605..1709789,1711513..1711754,1712695..1712832,1714423..1714579,1717913..1718027,1718630..1718761,1721284..1721501,1721599..1721714,1722063..1722116,1723748..1723791,1724085..1724255,1724408..1724535,1725531..1725669,1727296..1728107)
location: region:1689401-1728107:1
so has part: feature:1689401-1689720:1:exon
so has part: feature:1694553-1694664:1:exon
so has part: feature:1696289-1696440:1:exon
so has part: feature:1697230-1697341:1:exon
so has part: feature:1697506-1697556:1:exon
so has part: feature:1698406-1698501:1:exon
so has part: feature:1701774-1701866:1:exon
so has part: feature:1703640-1703746:1:exon
so has part: feature:1704200-1704341:1:exon
so has part: feature:1706509-1706725:1:exon
so has part: feature:1707724-1707905:1:exon
so has part: feature:1709605-1709789:1:exon
so has part: feature:1711513-1711754:1:exon
so has part: feature:1712695-1712832:1:exon
so has part: feature:1714423-1714579:1:exon
so has part: feature:1717913-1718027:1:exon
so has part: feature:1718630-1718761:1:exon
so has part: feature:1721284-1721501:1:exon
so has part: feature:1721599-1721714:1:exon
so has part: feature:1722063-1722116:1:exon
so has part: feature:1723748-1723791:1:exon
so has part: feature:1724085-1724255:1:exon
so has part: feature:1724408-1724535:1:exon
so has part: feature:1725531-1725669:1:exon
so has part: feature:1727296-1728107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1689401-1689720:1:exon

position:1689720:1
position: 1689720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1694553-1694664:1:exon

position:1694553:1
position: 1694553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694664:1
position: 1694664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1696289-1696440:1:exon

position:1696289:1
position: 1696289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696440:1
position: 1696440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1697230-1697341:1:exon

position:1697230:1
position: 1697230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697341:1
position: 1697341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1697506-1697556:1:exon

position:1697506:1
position: 1697506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697556:1
position: 1697556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1698406-1698501:1:exon

position:1698406:1
position: 1698406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698501:1
position: 1698501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1701774-1701866:1:exon

position:1701774:1
position: 1701774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701866:1
position: 1701866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1703640-1703746:1:exon

position:1703640:1
position: 1703640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703746:1
position: 1703746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1704200-1704341:1:exon

position:1704200:1
position: 1704200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704341:1
position: 1704341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1706509-1706725:1:exon

position:1706509:1
position: 1706509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706725:1
position: 1706725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1707724-1707905:1:exon

position:1707724:1
position: 1707724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1707905:1
position: 1707905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1709605-1709789:1:exon

position:1709605:1
position: 1709605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1709789:1
position: 1709789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1711513-1711754:1:exon

position:1711513:1
position: 1711513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1711754:1
position: 1711754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1712695-1712832:1:exon

position:1712695:1
position: 1712695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1712832:1
position: 1712832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1714423-1714579:1:exon

position:1714423:1
position: 1714423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714579:1
position: 1714579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1717913-1718027:1:exon

position:1717913:1
position: 1717913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718027:1
position: 1718027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1718630-1718761:1:exon

position:1718630:1
position: 1718630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718761:1
position: 1718761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1721284-1721501:1:exon

position:1721284:1
position: 1721284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721501:1
position: 1721501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1721599-1721714:1:exon

position:1721599:1
position: 1721599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721714:1
position: 1721714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1722063-1722116:1:exon

position:1722063:1
position: 1722063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722116:1
position: 1722116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1723748-1723791:1:exon

position:1723748:1
position: 1723748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723791:1
position: 1723791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1724085-1724255:1:exon

position:1724085:1
position: 1724085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724255:1
position: 1724255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1724408-1724535:1:exon

position:1724408:1
position: 1724408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724535:1
position: 1724535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1725531-1725669:1:exon

position:1725531:1
position: 1725531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725669:1
position: 1725669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1727296-1728107:1:exon

position:1727296:1
position: 1727296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Wdhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Wdhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and HMG-box DNA-binding protein 1
translation: MPATQKPMRYGHTEGHTDVCFDDSGSFIVTCGSDGDVRMWEDLDDDDPKSINVGEKAFSCALKNGKLVTAVSNNTVQVYTFPEGVPDGILTRFTTNANHVVFNRDGTKIAAGSSDFLVKVVNVMDNSQQQAFRGHDAPVLSLSFDPKDIFLASSSCDGTVRVWNVSDQTCAISWPILQKCNDVVNARSICRLAWQPGAGKLLAVPVEKSVKLYKRETWTNPFDLSDSSISQTLNIVTWSPCGQYLAAGTINGLIVVWNVETKDCMERVKHEKGYAVCGLDWHPTCGRICYTDVEGNLGILENVCDLSGKMSSSKVSSRVEKDYNDLFDGDDTSSAGDFLNDNAVEMPSFSKGIIDDEDEDEDDNLMLAADRLRRRSHVLGDDENSADATMLNTGLHKEEGEDDQAGSIHNLPLTKSQRPFYDGPMPTPRQKPFQPSSTPLHLSHRFMVWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHLSNAFNYTMGTLSHEAVLLACESTDELASKLHCLHFSSWDSSKEWIVDMPQSEDIEAICLGQGWAAAATTALFLRLFTIGGVQKEIFCLPGPVVSMAGHGEQLCVVYHRGTGFDGDQCLGVQLLELGQKKKQVLHGDPLPLTRKSYLAWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCNIREHCKGKSDHYWVVGIHEHPQQLRCIPCKGSRFPPTLPRPAVAILPFKLPYCQTATEKGQMEEQFWHSVLFHNYLDYLAKNGYEYEESTKNQAVKEQQELLMKMLALSCKLEREFRCVELASLMTQNAVNLAIKYASRSRKLILAQKLSELAAEKAAELAETQTEEEKEEDFRKKLNAGYSHTTTEWSQPRARNQVEEDTEEREETVPEERPEPHNHGQNLFQSANSPDVPALKSGAVFSSSQGRVNPFKVLVNSKEPAVSVNSTRSTNILDNMNKSSRKPIPLNRAANNEKSPVIKPLVPKPKSKQASAASYFQKRASQGDKTEEVKENPKNLSSETPAACPQNSENQRPKTGFQMWLEENRSHILCDNPDFSDEADIIKEGMIRFRVLSAEERKAWTNKAKGDLASDGAEAKKRKREICEAENQEEAAKENLDLSKKQKVLDPSANQKLSAFAFRRE
SIO_010081: Wdhd1
subclass of: SO_0000673
so part of: Wdhd1
location: join(1689644..1689720,1694553..1694664,1696289..1696440,1697230..1697341,1697506..1697556,1698406..1698501,1701774..1701866,1703640..1703746,1704200..1704341,1706509..1706725,1707724..1707905,1709605..1709789,1711513..1711754,1712695..1712832,1714423..1714579,1717913..1718027,1718630..1718761,1721284..1721501,1721599..1721714,1722063..1722116,1723748..1723791,1724085..1724255,1724408..1724535,1725531..1725669,1727296..1727487)
location: region:1689644-1727487:1
so has part: feature:1689644-1689720:1:exon
so has part: feature:1694553-1694664:1:exon
so has part: feature:1696289-1696440:1:exon
so has part: feature:1697230-1697341:1:exon
so has part: feature:1697506-1697556:1:exon
so has part: feature:1698406-1698501:1:exon
so has part: feature:1701774-1701866:1:exon
so has part: feature:1703640-1703746:1:exon
so has part: feature:1704200-1704341:1:exon
so has part: feature:1706509-1706725:1:exon
so has part: feature:1707724-1707905:1:exon
so has part: feature:1709605-1709789:1:exon
so has part: feature:1711513-1711754:1:exon
so has part: feature:1712695-1712832:1:exon
so has part: feature:1714423-1714579:1:exon
so has part: feature:1717913-1718027:1:exon
so has part: feature:1718630-1718761:1:exon
so has part: feature:1721284-1721501:1:exon
so has part: feature:1721599-1721714:1:exon
so has part: feature:1722063-1722116:1:exon
so has part: feature:1723748-1723791:1:exon
so has part: feature:1724085-1724255:1:exon
so has part: feature:1724408-1724535:1:exon
so has part: feature:1725531-1725669:1:exon
so has part: feature:1727296-1727487:1:exon

XP_005355419.1
type: Protein
SIO_000068: ncbiprotein

position:1689644:1
position: 1689644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727487:1
position: 1727487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689644-1689720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1694553-1694664:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1696289-1696440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1697230-1697341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697506-1697556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1698406-1698501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1701774-1701866:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1703640-1703746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1704200-1704341:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1706509-1706725:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1707724-1707905:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1709605-1709789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1711513-1711754:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1712695-1712832:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1714423-1714579:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1717913-1718027:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718630-1718761:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1721284-1721501:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1721599-1721714:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1722063-1722116:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1723748-1723791:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1724085-1724255:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1724408-1724535:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1725531-1725669:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1727296-1727487:1:exon

LOC113457060
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457060
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1699652..1699756
location: region:1699652-1699756:1
so has part: feature:1699652-1699756:1:exon
subclass of: SO_0000623

113457060
type: Gene
SIO_000068: ncbigene

position:1699652:1
position: 1699652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699756:1
position: 1699756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1699652-1699756:1:exon

LOC113457060
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457060
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377708.1
SIO_010081: LOC113457060
subclass of: SO_0000673
so part of: LOC113457060
location: 1699652..1699756
location: region:1699652-1699756:1
so has part: feature:1699652-1699756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1699652-1699756:1:exon

Gch1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gch1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1775311..1809049
location: region:1775311-1809049:1
so has part: feature:1775311-1809049:1:exon
subclass of: SO_0000010

101987137
type: Gene
SIO_000068: ncbigene

position:1775311:1
position: 1775311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1809049:1
position: 1809049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1775311-1809049:1:exon

Gch1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gch1
product: GTP cyclohydrolase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005355364.2
SIO_010081: Gch1
subclass of: SO_0000673
so part of: Gch1
location: join(1775311..1775794,1792030..1792139,1795482..1795537,1804535..1804566,1805412..1805496,1807097..1809049)
location: region:1775311-1809049:1
so has part: feature:1775311-1775794:1:exon
so has part: feature:1792030-1792139:1:exon
so has part: feature:1795482-1795537:1:exon
so has part: feature:1804535-1804566:1:exon
so has part: feature:1805412-1805496:1:exon
so has part: feature:1807097-1809049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1775311-1775794:1:exon

position:1775794:1
position: 1775794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1792030-1792139:1:exon

position:1792030:1
position: 1792030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792139:1
position: 1792139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1795482-1795537:1:exon

position:1795482:1
position: 1795482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795537:1
position: 1795537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1804535-1804566:1:exon

position:1804535:1
position: 1804535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804566:1
position: 1804566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1805412-1805496:1:exon

position:1805412:1
position: 1805412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805496:1
position: 1805496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1807097-1809049:1:exon

position:1807097:1
position: 1807097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gch1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gch1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP cyclohydrolase 1
translation: METGPLPAEKPRGPRCTNGFPERELSRPGASRPAEKSQAPEAKGAQPADAWKAGRPRSEEDNELNLPNLAAAYSSILRSLGEDPQRQGLLKTPWRAATAMQFFTKGYQETISDVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVGRVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALQPAGVGVVIEATHMCMVMRGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIRS
SIO_010081: Gch1
subclass of: SO_0000673
so part of: Gch1
location: join(1775458..1775794,1792030..1792139,1795482..1795537,1804535..1804566,1805412..1805496,1807097..1807223)
location: region:1775458-1807223:1
so has part: feature:1775458-1775794:1:exon
so has part: feature:1792030-1792139:1:exon
so has part: feature:1795482-1795537:1:exon
so has part: feature:1804535-1804566:1:exon
so has part: feature:1805412-1805496:1:exon
so has part: feature:1807097-1807223:1:exon

XP_005355421.1
type: Protein
SIO_000068: ncbiprotein

position:1775458:1
position: 1775458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1807223:1
position: 1807223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1775458-1775794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1792030-1792139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1795482-1795537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804535-1804566:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805412-1805496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1807097-1807223:1:exon

LOC113457011
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1841903..1842337)
location: region:1841903-1842337:-1
so has part: feature:1841903-1842337:-1:exon

113457011
type: Gene
SIO_000068: ncbigene

position:1841903:-1
position: 1841903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842337:-1
position: 1842337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841903-1842337:-1:exon

LOC113457011
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC113457011
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC113457011
subclass of: SO_0000673
so part of: LOC113457011
location: complement(1841903..1842337)
location: region:1841903-1842337:-1
so has part: feature:1841903-1842337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1841903-1842337:-1:exon

Samd4a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Samd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1872430..2088647)
location: region:1872430-2088647:-1
so has part: feature:1872430-2088647:-1:exon
subclass of: SO_0000010

101987608
type: Gene
SIO_000068: ncbigene

position:1872430:-1
position: 1872430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2088647:-1
position: 2088647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1872430-2088647:-1:exon

Samd4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Samd4a
product: sterile alpha motif domain containing 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_026783225.1
SIO_010081: Samd4a
subclass of: SO_0000673
so part of: Samd4a
location: complement(join(1872430..1872702,1877651..1877734,1884256..1884382,1885505..1885706,1889842..1889960,1895423..1895508,1898363..1898681,1906567..1906653,1908953..1909062,1953790..1954308,2088421..2088647))
location: region:1872430-2088647:-1
so has part: feature:2088421-2088647:-1:exon
so has part: feature:1953790-1954308:-1:exon
so has part: feature:1908953-1909062:-1:exon
so has part: feature:1906567-1906653:-1:exon
so has part: feature:1898363-1898681:-1:exon
so has part: feature:1895423-1895508:-1:exon
so has part: feature:1889842-1889960:-1:exon
so has part: feature:1885505-1885706:-1:exon
so has part: feature:1884256-1884382:-1:exon
so has part: feature:1877651-1877734:-1:exon
so has part: feature:1872430-1872702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2088421-2088647:-1:exon

position:2088421:-1
position: 2088421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1953790-1954308:-1:exon

position:1953790:-1
position: 1953790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1954308:-1
position: 1954308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1908953-1909062:-1:exon

position:1908953:-1
position: 1908953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909062:-1
position: 1909062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1906567-1906653:-1:exon

position:1906567:-1
position: 1906567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906653:-1
position: 1906653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1898363-1898681:-1:exon

position:1898363:-1
position: 1898363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898681:-1
position: 1898681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1895423-1895508:-1:exon

position:1895423:-1
position: 1895423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895508:-1
position: 1895508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1889842-1889960:-1:exon

position:1889842:-1
position: 1889842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889960:-1
position: 1889960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1885505-1885706:-1:exon

position:1885505:-1
position: 1885505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885706:-1
position: 1885706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1884256-1884382:-1:exon

position:1884256:-1
position: 1884256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884382:-1
position: 1884382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1877651-1877734:-1:exon

position:1877651:-1
position: 1877651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877734:-1
position: 1877734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1872430-1872702:-1:exon

position:1872702:-1
position: 1872702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Samd4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Samd4a
product: sterile alpha motif domain containing 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_026783224.1
SIO_010081: Samd4a
subclass of: SO_0000673
so part of: Samd4a
location: complement(join(1872430..1872702,1877651..1877734,1884256..1884382,1885505..1885706,1889842..1889960,1895423..1895508,1898363..1898681,1906567..1906653,1908953..1909062,1920087..1920350,1953790..1954308,2088421..2088647))
location: region:1872430-2088647:-1
so has part: feature:2088421-2088647:-1:exon
so has part: feature:1953790-1954308:-1:exon
so has part: feature:1920087-1920350:-1:exon
so has part: feature:1908953-1909062:-1:exon
so has part: feature:1906567-1906653:-1:exon
so has part: feature:1898363-1898681:-1:exon
so has part: feature:1895423-1895508:-1:exon
so has part: feature:1889842-1889960:-1:exon
so has part: feature:1885505-1885706:-1:exon
so has part: feature:1884256-1884382:-1:exon
so has part: feature:1877651-1877734:-1:exon
so has part: feature:1872430-1872702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2088421-2088647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1953790-1954308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1920087-1920350:-1:exon

position:1920087:-1
position: 1920087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1920350:-1
position: 1920350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1908953-1909062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906567-1906653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1898363-1898681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1895423-1895508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1889842-1889960:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1885505-1885706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1884256-1884382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1877651-1877734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872430-1872702:-1:exon

Samd4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Samd4a
product: sterile alpha motif domain containing 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005355368.2
SIO_010081: Samd4a
subclass of: SO_0000673
so part of: Samd4a
location: complement(join(1872430..1872702,1877651..1877734,1884256..1884382,1885505..1885706,1889842..1889960,1895423..1895508,1898363..1898681,1906567..1906653,1908953..1909062,1920087..1920350,1953790..1954308,1970075..1970316))
location: region:1872430-1970316:-1
so has part: feature:1970075-1970316:-1:exon
so has part: feature:1953790-1954308:-1:exon
so has part: feature:1920087-1920350:-1:exon
so has part: feature:1908953-1909062:-1:exon
so has part: feature:1906567-1906653:-1:exon
so has part: feature:1898363-1898681:-1:exon
so has part: feature:1895423-1895508:-1:exon
so has part: feature:1889842-1889960:-1:exon
so has part: feature:1885505-1885706:-1:exon
so has part: feature:1884256-1884382:-1:exon
so has part: feature:1877651-1877734:-1:exon
so has part: feature:1872430-1872702:-1:exon

position:1970316:-1
position: 1970316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1970075-1970316:-1:exon

position:1970075:-1
position: 1970075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1953790-1954308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1920087-1920350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908953-1909062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906567-1906653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1898363-1898681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1895423-1895508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1889842-1889960:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1885505-1885706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1884256-1884382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1877651-1877734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872430-1872702:-1:exon

Samd4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Samd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Smaug homolog 1 isoform X2
translation: MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEGEANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQRQNSDDRLNGWQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTIGTSTSTNVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRHEPSLMGPENPSTDGKDGAAGANSVTASASAGASGGLQPPQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLDKCLVHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGGGMGRRNPRQYQIASRNVPSARLGLLGTSGFVSSNQRHTAANPTVMKQGRQNLWFANPGGSNSMPSRTHSSVQKTRSLPVHTSPRNMLLFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
SIO_010081: Samd4a
subclass of: SO_0000673
so part of: Samd4a
location: complement(join(1872674..1872702,1877651..1877734,1884256..1884382,1885505..1885706,1889842..1889960,1895423..1895508,1898363..1898681,1906567..1906653,1908953..1909062,1953790..1954308,2088421..2088616))
location: region:1872674-2088616:-1
so has part: feature:2088421-2088616:-1:exon
so has part: feature:1953790-1954308:-1:exon
so has part: feature:1908953-1909062:-1:exon
so has part: feature:1906567-1906653:-1:exon
so has part: feature:1898363-1898681:-1:exon
so has part: feature:1895423-1895508:-1:exon
so has part: feature:1889842-1889960:-1:exon
so has part: feature:1885505-1885706:-1:exon
so has part: feature:1884256-1884382:-1:exon
so has part: feature:1877651-1877734:-1:exon
so has part: feature:1872674-1872702:-1:exon

XP_026639026.1
type: Protein
SIO_000068: ncbiprotein

position:1872674:-1
position: 1872674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2088616:-1
position: 2088616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2088421-2088616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1953790-1954308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908953-1909062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1906567-1906653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1898363-1898681:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1895423-1895508:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1889842-1889960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1885505-1885706:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1884256-1884382:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1877651-1877734:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1872674-1872702:-1:exon

Samd4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Samd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Smaug homolog 1 isoform X1
translation: MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEGEANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQRQNSDDRLNGWQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTIGTSTSTILSGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASSGSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRHEPSLMGPENPSTDGKDGAAGANSVTASASAGASGGLQPPQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLDKCLVHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGGGMGRRNPRQYQIASRNVPSARLGLLGTSGFVSSNQRHTAANPTVMKQGRQNLWFANPGGSNSMPSRTHSSVQKTRSLPVHTSPRNMLLFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
SIO_010081: Samd4a
subclass of: SO_0000673
so part of: Samd4a
location: complement(join(1872674..1872702,1877651..1877734,1884256..1884382,1885505..1885706,1889842..1889960,1895423..1895508,1898363..1898681,1906567..1906653,1908953..1909062,1920087..1920350,1953790..1954308,2088421..2088616))
location: region:1872674-2088616:-1
so has part: feature:2088421-2088616:-1:exon
so has part: feature:1953790-1954308:-1:exon
so has part: feature:1920087-1920350:-1:exon
so has part: feature:1908953-1909062:-1:exon
so has part: feature:1906567-1906653:-1:exon
so has part: feature:1898363-1898681:-1:exon
so has part: feature:1895423-1895508:-1:exon
so has part: feature:1889842-1889960:-1:exon
so has part: feature:1885505-1885706:-1:exon
so has part: feature:1884256-1884382:-1:exon
so has part: feature:1877651-1877734:-1:exon
so has part: feature:1872674-1872702:-1:exon

XP_026639025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2088421-2088616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1953790-1954308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1920087-1920350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908953-1909062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906567-1906653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1898363-1898681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1895423-1895508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1889842-1889960:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1885505-1885706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1884256-1884382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1877651-1877734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872674-1872702:-1:exon

Samd4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Samd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Smaug homolog 1 isoform X3
translation: MKLLPKILAHSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQRQNSDDRLNGWQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTIGTSTSTILSGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASSGSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRHEPSLMGPENPSTDGKDGAAGANSVTASASAGASGGLQPPQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLDKCLVHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGGGMGRRNPRQYQIASRNVPSARLGLLGTSGFVSSNQRHTAANPTVMKQGRQNLWFANPGGSNSMPSRTHSSVQKTRSLPVHTSPRNMLLFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
SIO_010081: Samd4a
subclass of: SO_0000673
so part of: Samd4a
location: complement(join(1872674..1872702,1877651..1877734,1884256..1884382,1885505..1885706,1889842..1889960,1895423..1895508,1898363..1898681,1906567..1906653,1908953..1909062,1920087..1920350,1953790..1954201))
location: region:1872674-1954201:-1
so has part: feature:1953790-1954201:-1:exon
so has part: feature:1920087-1920350:-1:exon
so has part: feature:1908953-1909062:-1:exon
so has part: feature:1906567-1906653:-1:exon
so has part: feature:1898363-1898681:-1:exon
so has part: feature:1895423-1895508:-1:exon
so has part: feature:1889842-1889960:-1:exon
so has part: feature:1885505-1885706:-1:exon
so has part: feature:1884256-1884382:-1:exon
so has part: feature:1877651-1877734:-1:exon
so has part: feature:1872674-1872702:-1:exon

XP_005355425.1
type: Protein
SIO_000068: ncbiprotein

position:1954201:-1
position: 1954201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953790-1954201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920087-1920350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908953-1909062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1906567-1906653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1898363-1898681:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1895423-1895508:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1889842-1889960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1885505-1885706:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1884256-1884382:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1877651-1877734:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1872674-1872702:-1:exon

LOC101987420
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101987420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1970442..1971580
location: region:1970442-1971580:1
so has part: feature:1970442-1971580:1:exon
subclass of: SO_0000011

101987420
type: Gene
SIO_000068: ncbigene

position:1970442:1
position: 1970442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971580:1
position: 1971580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1970442-1971580:1:exon

LOC101987420
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC101987420
product: uncharacterized LOC101987420
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_258458.2
SIO_010081: LOC101987420
subclass of: SO_0000673
so part of: LOC101987420
location: join(1970442..1970593,1970905..1970987,1971103..1971133,1971357..1971580)
location: region:1970442-1971580:1
so has part: feature:1970442-1970593:1:exon
so has part: feature:1970905-1970987:1:exon
so has part: feature:1971103-1971133:1:exon
so has part: feature:1971357-1971580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1970442-1970593:1:exon

position:1970593:1
position: 1970593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1970905-1970987:1:exon

position:1970905:1
position: 1970905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1970987:1
position: 1970987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1971103-1971133:1:exon

position:1971103:1
position: 1971103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971133:1
position: 1971133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1971357-1971580:1:exon

position:1971357:1
position: 1971357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cgrrf1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cgrrf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2120516..2144720)
location: region:2120516-2144720:-1
so has part: feature:2120516-2144720:-1:exon
subclass of: SO_0000010

101988442
type: Gene
SIO_000068: ncbigene

position:2120516:-1
position: 2120516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144720:-1
position: 2144720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2120516-2144720:-1:exon

Cgrrf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cgrrf1
product: cell growth regulator with ring finger domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_026783226.1
SIO_010081: Cgrrf1
subclass of: SO_0000673
so part of: Cgrrf1
location: complement(join(2120516..2121470,2125830..2125977,2126104..2126281,2131645..2131784,2144468..2144720))
location: region:2120516-2144720:-1
so has part: feature:2144468-2144720:-1:exon
so has part: feature:2131645-2131784:-1:exon
so has part: feature:2126104-2126281:-1:exon
so has part: feature:2125830-2125977:-1:exon
so has part: feature:2120516-2121470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2144468-2144720:-1:exon

position:2144468:-1
position: 2144468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2131645-2131784:-1:exon

position:2131645:-1
position: 2131645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131784:-1
position: 2131784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2126104-2126281:-1:exon

position:2126104:-1
position: 2126104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126281:-1
position: 2126281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2125830-2125977:-1:exon

position:2125830:-1
position: 2125830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2125977:-1
position: 2125977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2120516-2121470:-1:exon

position:2121470:-1
position: 2121470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cgrrf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cgrrf1
product: cell growth regulator with ring finger domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005355369.3
SIO_010081: Cgrrf1
subclass of: SO_0000673
so part of: Cgrrf1
location: complement(join(2120516..2121470,2121658..2121765,2125830..2125977,2126104..2126281,2131645..2131784,2144468..2144720))
location: region:2120516-2144720:-1
so has part: feature:2144468-2144720:-1:exon
so has part: feature:2131645-2131784:-1:exon
so has part: feature:2126104-2126281:-1:exon
so has part: feature:2125830-2125977:-1:exon
so has part: feature:2121658-2121765:-1:exon
so has part: feature:2120516-2121470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2144468-2144720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2131645-2131784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2126104-2126281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2125830-2125977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2121658-2121765:-1:exon

position:2121658:-1
position: 2121658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121765:-1
position: 2121765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2120516-2121470:-1:exon

Cgrrf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cgrrf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell growth regulator with RING finger domain protein 1 isoform X2
translation: MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFSTRTFKKQMRQVKNPFGLEISNPSSASLAAGMTLTADCLENSRLTCFWGCSVQKLYEALQKHVYCFRISTPQALEEALYSDYLHREQYFIKKHSKEELYCQLPSDTEIDDFGPVPRSRYPLVALLTLADEEDREIYDIQLFMSANSSPSPSSRPSPADRSAEQSLLEKAGLAGSDVEPVEESSKDCVVCQNGGVNWVLLPCRHACLCDSCVCYFKQCPMCRQFVQESFALCSQKEPDKDVLEAS
SIO_010081: Cgrrf1
subclass of: SO_0000673
so part of: Cgrrf1
location: complement(join(2121150..2121470,2125830..2125977,2126104..2126281,2131645..2131784,2144468..2144571))
location: region:2121150-2144571:-1
so has part: feature:2144468-2144571:-1:exon
so has part: feature:2131645-2131784:-1:exon
so has part: feature:2126104-2126281:-1:exon
so has part: feature:2125830-2125977:-1:exon
so has part: feature:2121150-2121470:-1:exon

XP_026639027.1
type: Protein
SIO_000068: ncbiprotein

position:2121150:-1
position: 2121150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144571:-1
position: 2144571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144468-2144571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2131645-2131784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2126104-2126281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2125830-2125977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2121150-2121470:-1:exon

Cgrrf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cgrrf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell growth regulator with RING finger domain protein 1 isoform X1
translation: MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFSTRTFKKQMRQVKNPFGLEISNPSSASLAAGMTLTADCLENSRLTCFWGCSVQKLYEALQKHVYCFRISTPQALEEALYSDYLHREQYFIKKHSKEELYCQLPSDTEIDDFGPVPRSRYPLVALLTLADEEDREIYDIISMVSVIHIPDKTYKLPCRILYQYLLLAQGQFYDLKQLFMSANSSPSPSSRPSPADRSAEQSLLEKAGLAGSDVEPVEESSKDCVVCQNGGVNWVLLPCRHACLCDSCVCYFKQCPMCRQFVQESFALCSQKEPDKDVLEAS
SIO_010081: Cgrrf1
subclass of: SO_0000673
so part of: Cgrrf1
location: complement(join(2121150..2121470,2121658..2121765,2125830..2125977,2126104..2126281,2131645..2131784,2144468..2144571))
location: region:2121150-2144571:-1
so has part: feature:2144468-2144571:-1:exon
so has part: feature:2131645-2131784:-1:exon
so has part: feature:2126104-2126281:-1:exon
so has part: feature:2125830-2125977:-1:exon
so has part: feature:2121658-2121765:-1:exon
so has part: feature:2121150-2121470:-1:exon

XP_005355426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2144468-2144571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2131645-2131784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2126104-2126281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2125830-2125977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2121658-2121765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2121150-2121470:-1:exon

LOC113457029
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2131795..2133322
location: region:2131795-2133322:1
so has part: feature:2131795-2133322:1:exon
subclass of: SO_0000011

113457029
type: Gene
SIO_000068: ncbigene

position:2131795:1
position: 2131795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133322:1
position: 2133322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2131795-2133322:1:exon

LOC113457029
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: lncRNA
gene: LOC113457029
product: uncharacterized LOC113457029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003377686.1
SIO_010081: LOC113457029
subclass of: SO_0000673
so part of: LOC113457029
location: join(2131795..2131885,2132159..2132298,2132992..2133322)
location: region:2131795-2133322:1
so has part: feature:2131795-2131885:1:exon
so has part: feature:2132159-2132298:1:exon
so has part: feature:2132992-2133322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2131795-2131885:1:exon

position:2131885:1
position: 2131885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2132159-2132298:1:exon

position:2132159:1
position: 2132159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2132298:1
position: 2132298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2132992-2133322:1:exon

position:2132992:1
position: 2132992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gmfb
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gmfb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2152857..2163689
location: region:2152857-2163689:1
so has part: feature:2152857-2163689:1:exon
subclass of: SO_0000010

101988725
type: Gene
SIO_000068: ncbigene

position:2152857:1
position: 2152857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2163689:1
position: 2163689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2152857-2163689:1:exon

Gmfb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gmfb
product: glia maturation factor beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_026783216.1
SIO_010081: Gmfb
subclass of: SO_0000673
so part of: Gmfb
location: join(2152857..2152986,2158083..2158179,2159541..2159590,2160055..2160104,2160655..2160740,2161358..2161431,2162694..2163689)
location: region:2152857-2163689:1
so has part: feature:2152857-2152986:1:exon
so has part: feature:2158083-2158179:1:exon
so has part: feature:2159541-2159590:1:exon
so has part: feature:2160055-2160104:1:exon
so has part: feature:2160655-2160740:1:exon
so has part: feature:2161358-2161431:1:exon
so has part: feature:2162694-2163689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2152857-2152986:1:exon

position:2152986:1
position: 2152986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2158083-2158179:1:exon

position:2158083:1
position: 2158083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2158179:1
position: 2158179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2159541-2159590:1:exon

position:2159541:1
position: 2159541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159590:1
position: 2159590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2160055-2160104:1:exon

position:2160055:1
position: 2160055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160104:1
position: 2160104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2160655-2160740:1:exon

position:2160655:1
position: 2160655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160740:1
position: 2160740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2161358-2161431:1:exon

position:2161358:1
position: 2161358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161431:1
position: 2161431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2162694-2163689:1:exon

position:2162694:1
position: 2162694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gmfb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gmfb
product: glia maturation factor beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_013349204.2
SIO_010081: Gmfb
subclass of: SO_0000673
so part of: Gmfb
location: join(2152857..2152986,2158083..2158179,2159541..2159590,2160055..2160104,2160658..2160740,2161358..2161431,2162694..2163689)
location: region:2152857-2163689:1
so has part: feature:2152857-2152986:1:exon
so has part: feature:2158083-2158179:1:exon
so has part: feature:2159541-2159590:1:exon
so has part: feature:2160055-2160104:1:exon
so has part: feature:2160658-2160740:1:exon
so has part: feature:2161358-2161431:1:exon
so has part: feature:2162694-2163689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2152857-2152986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2158083-2158179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2159541-2159590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2160055-2160104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2160658-2160740:1:exon

position:2160658:1
position: 2160658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2161358-2161431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2162694-2163689:1:exon

Gmfb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gmfb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glia maturation factor beta isoform X1
translation: MSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDKRLVVLDEELEGVSPDELKDELPERQPRTFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH
SIO_010081: Gmfb
subclass of: SO_0000673
so part of: Gmfb
location: join(2152984..2152986,2158083..2158179,2159541..2159590,2160055..2160104,2160655..2160740,2161358..2161431,2162694..2162765)
location: region:2152984-2162765:1
so has part: feature:2152984-2152986:1:exon
so has part: feature:2158083-2158179:1:exon
so has part: feature:2159541-2159590:1:exon
so has part: feature:2160055-2160104:1:exon
so has part: feature:2160655-2160740:1:exon
so has part: feature:2161358-2161431:1:exon
so has part: feature:2162694-2162765:1:exon

XP_026639017.1
type: Protein
SIO_000068: ncbiprotein

position:2152984:1
position: 2152984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162765:1
position: 2162765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2152984-2152986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2158083-2158179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2159541-2159590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2160055-2160104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2160655-2160740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2161358-2161431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2162694-2162765:1:exon

Gmfb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gmfb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glia maturation factor beta isoform X2
translation: MSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDKRLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH
SIO_010081: Gmfb
subclass of: SO_0000673
so part of: Gmfb
location: join(2152984..2152986,2158083..2158179,2159541..2159590,2160055..2160104,2160658..2160740,2161358..2161431,2162694..2162765)
location: region:2152984-2162765:1
so has part: feature:2152984-2152986:1:exon
so has part: feature:2158083-2158179:1:exon
so has part: feature:2159541-2159590:1:exon
so has part: feature:2160055-2160104:1:exon
so has part: feature:2160658-2160740:1:exon
so has part: feature:2161358-2161431:1:exon
so has part: feature:2162694-2162765:1:exon

XP_013204658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2152984-2152986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2158083-2158179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2159541-2159590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2160055-2160104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2160658-2160740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2161358-2161431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2162694-2162765:1:exon

Cnih1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cnih1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2185479..2199174
location: region:2185479-2199174:1
so has part: feature:2185479-2199174:1:exon
subclass of: SO_0000010

101989002
type: Gene
SIO_000068: ncbigene

position:2185479:1
position: 2185479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199174:1
position: 2199174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185479-2199174:1:exon

Cnih1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cnih1
product: cornichon family AMPA receptor auxiliary protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_026783253.1
SIO_010081: Cnih1
subclass of: SO_0000673
so part of: Cnih1
location: join(2185479..2185651,2189357..2189425,2189658..2189705,2193563..2193675,2194897..2195040,2196510..2199174)
location: region:2185479-2199174:1
so has part: feature:2185479-2185651:1:exon
so has part: feature:2189357-2189425:1:exon
so has part: feature:2189658-2189705:1:exon
so has part: feature:2193563-2193675:1:exon
so has part: feature:2194897-2195040:1:exon
so has part: feature:2196510-2199174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2185479-2185651:1:exon

position:2185651:1
position: 2185651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2189357-2189425:1:exon

position:2189357:1
position: 2189357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189425:1
position: 2189425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2189658-2189705:1:exon

position:2189658:1
position: 2189658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189705:1
position: 2189705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2193563-2193675:1:exon

position:2193563:1
position: 2193563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193675:1
position: 2193675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2194897-2195040:1:exon

position:2194897:1
position: 2194897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195040:1
position: 2195040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2196510-2199174:1:exon

position:2196510:1
position: 2196510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cnih1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cnih1
product: cornichon family AMPA receptor auxiliary protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_005355372.2
SIO_010081: Cnih1
subclass of: SO_0000673
so part of: Cnih1
location: join(2185480..2185651,2189357..2189425,2193563..2193675,2194897..2195040,2196510..2199174)
location: region:2185480-2199174:1
so has part: feature:2185480-2185651:1:exon
so has part: feature:2189357-2189425:1:exon
so has part: feature:2193563-2193675:1:exon
so has part: feature:2194897-2195040:1:exon
so has part: feature:2196510-2199174:1:exon

position:2185480:1
position: 2185480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185480-2185651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2189357-2189425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2193563-2193675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2194897-2195040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2196510-2199174:1:exon

Cnih1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cnih1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cornichon homolog 1 isoform X1
translation: MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPTVEKVKKIKRVKIALKLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVSS
SIO_010081: Cnih1
subclass of: SO_0000673
so part of: Cnih1
location: join(2185571..2185651,2189357..2189425,2189658..2189705,2193563..2193675,2194897..2195040,2196510..2196537)
location: region:2185571-2196537:1
so has part: feature:2185571-2185651:1:exon
so has part: feature:2189357-2189425:1:exon
so has part: feature:2189658-2189705:1:exon
so has part: feature:2193563-2193675:1:exon
so has part: feature:2194897-2195040:1:exon
so has part: feature:2196510-2196537:1:exon

XP_026639054.1
type: Protein
SIO_000068: ncbiprotein

position:2185571:1
position: 2185571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196537:1
position: 2196537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185571-2185651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2189357-2189425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2189658-2189705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193563-2193675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2194897-2195040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2196510-2196537:1:exon

Cnih1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cnih1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cornichon homolog 1 isoform X2
translation: MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVSS
SIO_010081: Cnih1
subclass of: SO_0000673
so part of: Cnih1
location: join(2185571..2185651,2189357..2189425,2193563..2193675,2194897..2195040,2196510..2196537)
location: region:2185571-2196537:1
so has part: feature:2185571-2185651:1:exon
so has part: feature:2189357-2189425:1:exon
so has part: feature:2193563-2193675:1:exon
so has part: feature:2194897-2195040:1:exon
so has part: feature:2196510-2196537:1:exon

XP_005355429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2185571-2185651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2189357-2189425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2193563-2193675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2194897-2195040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2196510-2196537:1:exon

Cdkn3
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cdkn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2200893..2212970)
location: region:2200893-2212970:-1
so has part: feature:2200893-2212970:-1:exon
subclass of: SO_0000010

101989478
type: Gene
SIO_000068: ncbigene

position:2200893:-1
position: 2200893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212970:-1
position: 2212970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200893-2212970:-1:exon

Cdkn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cdkn3
product: cyclin dependent kinase inhibitor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005355374.3
SIO_010081: Cdkn3
subclass of: SO_0000673
so part of: Cdkn3
location: complement(join(2200893..2201094,2202668..2202768,2204001..2204032,2205319..2205541,2208542..2208586,2208970..2209025,2210940..2211022,2212899..2212970))
location: region:2200893-2212970:-1
so has part: feature:2212899-2212970:-1:exon
so has part: feature:2210940-2211022:-1:exon
so has part: feature:2208970-2209025:-1:exon
so has part: feature:2208542-2208586:-1:exon
so has part: feature:2205319-2205541:-1:exon
so has part: feature:2204001-2204032:-1:exon
so has part: feature:2202668-2202768:-1:exon
so has part: feature:2200893-2201094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2212899-2212970:-1:exon

position:2212899:-1
position: 2212899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2210940-2211022:-1:exon

position:2210940:-1
position: 2210940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211022:-1
position: 2211022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2208970-2209025:-1:exon

position:2208970:-1
position: 2208970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2209025:-1
position: 2209025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2208542-2208586:-1:exon

position:2208542:-1
position: 2208542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2208586:-1
position: 2208586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2205319-2205541:-1:exon

position:2205319:-1
position: 2205319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2205541:-1
position: 2205541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2204001-2204032:-1:exon

position:2204001:-1
position: 2204001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2204032:-1
position: 2204032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2202668-2202768:-1:exon

position:2202668:-1
position: 2202668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202768:-1
position: 2202768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2200893-2201094:-1:exon

position:2201094:-1
position: 2201094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cdkn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cdkn3
product: cyclin dependent kinase inhibitor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005355373.2
SIO_010081: Cdkn3
subclass of: SO_0000673
so part of: Cdkn3
location: complement(join(2200893..2201094,2202668..2202771,2204001..2204032,2205319..2205541,2208542..2208586,2208970..2209025,2210940..2211022,2212899..2212970))
location: region:2200893-2212970:-1
so has part: feature:2212899-2212970:-1:exon
so has part: feature:2210940-2211022:-1:exon
so has part: feature:2208970-2209025:-1:exon
so has part: feature:2208542-2208586:-1:exon
so has part: feature:2205319-2205541:-1:exon
so has part: feature:2204001-2204032:-1:exon
so has part: feature:2202668-2202771:-1:exon
so has part: feature:2200893-2201094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2212899-2212970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2210940-2211022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208970-2209025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2208542-2208586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2205319-2205541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2204001-2204032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2202668-2202771:-1:exon

position:2202771:-1
position: 2202771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2200893-2201094:-1:exon

Cdkn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cdkn3
product: cyclin dependent kinase inhibitor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013349203.2
SIO_010081: Cdkn3
subclass of: SO_0000673
so part of: Cdkn3
location: complement(join(2200893..2201094,2202668..2202771,2204001..2204032,2205319..2205541,2208542..2208586,2208970..2209025,2210940..2211022,2212079..2212124))
location: region:2200893-2212124:-1
so has part: feature:2212079-2212124:-1:exon
so has part: feature:2210940-2211022:-1:exon
so has part: feature:2208970-2209025:-1:exon
so has part: feature:2208542-2208586:-1:exon
so has part: feature:2205319-2205541:-1:exon
so has part: feature:2204001-2204032:-1:exon
so has part: feature:2202668-2202771:-1:exon
so has part: feature:2200893-2201094:-1:exon

position:2212124:-1
position: 2212124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2212079-2212124:-1:exon

position:2212079:-1
position: 2212079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2210940-2211022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208970-2209025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2208542-2208586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2205319-2205541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2204001-2204032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2202668-2202771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2200893-2201094:-1:exon

Cdkn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cdkn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase inhibitor 3 isoform X2
translation: MKPPISIEASEFDSSDEEPMEDEQTPIQISWLPLSRVNCSQFLGLCALPGCKFKDVRRNIHKDTEELKSYGIQDVFVFCTRGELSKYRVPNLLDLYQQSGIVTHHHPIPDGGTPDIGSCWGIMEELATCLKNHRKTLIHCYGGLGRSCLAACLLLYLSDSVSPQQAIDSLRDVRGSGAIQTIKQYNYLHEFRDKLATYLSSRDSLSRSVSR
SIO_010081: Cdkn3
subclass of: SO_0000673
so part of: Cdkn3
location: complement(join(2201008..2201094,2202668..2202768,2204001..2204032,2205319..2205541,2208542..2208586,2208970..2209025,2210940..2211022,2212899..2212907))
location: region:2201008-2212907:-1
so has part: feature:2212899-2212907:-1:exon
so has part: feature:2210940-2211022:-1:exon
so has part: feature:2208970-2209025:-1:exon
so has part: feature:2208542-2208586:-1:exon
so has part: feature:2205319-2205541:-1:exon
so has part: feature:2204001-2204032:-1:exon
so has part: feature:2202668-2202768:-1:exon
so has part: feature:2201008-2201094:-1:exon

XP_005355431.1
type: Protein
SIO_000068: ncbiprotein

position:2201008:-1
position: 2201008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212907:-1
position: 2212907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2212899-2212907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2210940-2211022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208970-2209025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2208542-2208586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2205319-2205541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2204001-2204032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2202668-2202768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2201008-2201094:-1:exon

Cdkn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cdkn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase inhibitor 3 isoform X1
translation: MKPPISIEASEFDSSDEEPMEDEQTPIQISWLPLSRVNCSQFLGLCALPGCKFKDVRRNIHKDTEELKSYGIQDVFVFCTRGELSKYRVPNLLDLYQQSGIVTHHHPIPDGGTPDIGSCWGIMEELATCLKNHRKTLIHCYGGLGRSCLVAACLLLYLSDSVSPQQAIDSLRDVRGSGAIQTIKQYNYLHEFRDKLATYLSSRDSLSRSVSR
SIO_010081: Cdkn3
subclass of: SO_0000673
so part of: Cdkn3
location: complement(join(2201008..2201094,2202668..2202771,2204001..2204032,2205319..2205541,2208542..2208586,2208970..2209025,2210940..2211022,2212899..2212907))
location: region:2201008-2212907:-1
so has part: feature:2212899-2212907:-1:exon
so has part: feature:2210940-2211022:-1:exon
so has part: feature:2208970-2209025:-1:exon
so has part: feature:2208542-2208586:-1:exon
so has part: feature:2205319-2205541:-1:exon
so has part: feature:2204001-2204032:-1:exon
so has part: feature:2202668-2202771:-1:exon
so has part: feature:2201008-2201094:-1:exon

XP_005355430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2212899-2212907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2210940-2211022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208970-2209025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2208542-2208586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2205319-2205541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2204001-2204032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2202668-2202771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2201008-2201094:-1:exon

Cdkn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cdkn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase inhibitor 3 isoform X3
translation: MEDEQTPIQISWLPLSRVNCSQFLGLCALPGCKFKDVRRNIHKDTEELKSYGIQDVFVFCTRGELSKYRVPNLLDLYQQSGIVTHHHPIPDGGTPDIGSCWGIMEELATCLKNHRKTLIHCYGGLGRSCLVAACLLLYLSDSVSPQQAIDSLRDVRGSGAIQTIKQYNYLHEFRDKLATYLSSRDSLSRSVSR
SIO_010081: Cdkn3
subclass of: SO_0000673
so part of: Cdkn3
location: complement(join(2201008..2201094,2202668..2202771,2204001..2204032,2205319..2205541,2208542..2208586,2208970..2209025,2210940..2210974))
location: region:2201008-2210974:-1
so has part: feature:2210940-2210974:-1:exon
so has part: feature:2208970-2209025:-1:exon
so has part: feature:2208542-2208586:-1:exon
so has part: feature:2205319-2205541:-1:exon
so has part: feature:2204001-2204032:-1:exon
so has part: feature:2202668-2202771:-1:exon
so has part: feature:2201008-2201094:-1:exon

XP_013204657.1
type: Protein
SIO_000068: ncbiprotein

position:2210974:-1
position: 2210974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210940-2210974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2208970-2209025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208542-2208586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2205319-2205541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2204001-2204032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2202668-2202771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2201008-2201094:-1:exon

LOC113457056
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC113457056
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2228385..2228491)
location: region:2228385-2228491:-1
so has part: feature:2228385-2228491:-1:exon
subclass of: SO_0000623

113457056
type: Gene
SIO_000068: ncbigene

position:2228385:-1
position: 2228385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228491:-1
position: 2228491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2228385-2228491:-1:exon

LOC113457056
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 79684
nc RNA class: snRNA
gene: LOC113457056
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003377705.1
SIO_010081: LOC113457056
subclass of: SO_0000673
so part of: LOC113457056
location: complement(2228385..2228491)
location: region:2228385-2228491:-1
so has part: feature:2228385-2228491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2228385-2228491:-1:exon

LOC101989963
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101989963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2357817..2359849
location: region:2357817-2359849:1
so has part: feature:2357817-2359849:1:exon

101989963
type: Gene
SIO_000068: ncbigene

position:2357817:1
position: 2357817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2359849:1
position: 2359849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2357817-2359849:1:exon

LOC101989963
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101989963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101989963
subclass of: SO_0000673
so part of: LOC101989963
location: 2357817..2359849
location: region:2357817-2359849:1
so has part: feature:2357817-2359849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2357817-2359849:1:exon

Bmp4
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Bmp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2577506..2581973
location: region:2577506-2581973:1
so has part: feature:2577506-2581973:1:exon
subclass of: SO_0000010

101990248
type: Gene
SIO_000068: ncbigene

position:2577506:1
position: 2577506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581973:1
position: 2581973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2577506-2581973:1:exon

Bmp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Bmp4
product: bone morphogenetic protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026783257.1
SIO_010081: Bmp4
subclass of: SO_0000673
so part of: Bmp4
location: join(2577506..2578000,2578532..2578656,2579693..2580072,2581067..2581973)
location: region:2577506-2581973:1
so has part: feature:2577506-2578000:1:exon
so has part: feature:2578532-2578656:1:exon
so has part: feature:2579693-2580072:1:exon
so has part: feature:2581067-2581973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2577506-2578000:1:exon

position:2578000:1
position: 2578000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2578532-2578656:1:exon

position:2578532:1
position: 2578532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2578656:1
position: 2578656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2579693-2580072:1:exon

position:2579693:1
position: 2579693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580072:1
position: 2580072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2581067-2581973:1:exon

position:2581067:1
position: 2581067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Bmp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Bmp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 4
translation: MIPGNRMLMVVLLCQVLLGGASHASLIPETGKKKVAEIQGHAGGRRSGQSHELLRDFEATLLQMFGLRRRPQPSKSAVIPDYMRDLYRLQSGEEEEEEQNQGTGLEYPERPASRANTVRSFHHEEHLENIPGTSENSAFRFFFNLSSIPENEAISSAELRLFREQVDQGPDWEWGFHRINIYEVMKPPAEIEPGHLITRLLDTRLVHHNVTRWETFDVSPAVLRWTREKQPNYGLAIEVTHLHQTRTHQGQHVRISRSLPQGSGDWAQLRPLLVTFGHDGRGHTLTRRRRAKRSPKHHPQRSRKKNKNCRRHSLYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHLNSTNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGCR
SIO_010081: Bmp4
subclass of: SO_0000673
so part of: Bmp4
location: join(2579700..2580072,2581067..2581923)
location: region:2579700-2581923:1
so has part: feature:2579700-2580072:1:exon
so has part: feature:2581067-2581923:1:exon

XP_026639058.1
type: Protein
SIO_000068: ncbiprotein

position:2579700:1
position: 2579700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581923:1
position: 2581923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579700-2580072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2581067-2581923:1:exon

LOC101994868
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101994868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3208484..3209300)
location: region:3208484-3209300:-1
so has part: feature:3208484-3209300:-1:exon

101994868
type: Gene
SIO_000068: ncbigene

position:3208484:-1
position: 3208484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209300:-1
position: 3209300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3208484-3209300:-1:exon

LOC101994868
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101994868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC101994868
subclass of: SO_0000673
so part of: LOC101994868
location: complement(3208484..3209068)
location: region:3208484-3209068:-1
so has part: feature:3208484-3209068:-1:exon

position:3209068:-1
position: 3209068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3208484-3209068:-1:exon

LOC101994868
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101994868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC101994868
subclass of: SO_0000673
so part of: LOC101994868
location: complement(3209118..3209150)
location: region:3209118-3209150:-1
so has part: feature:3209118-3209150:-1:exon

position:3209118:-1
position: 3209118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209150:-1
position: 3209150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3209118-3209150:-1:exon

LOC101994868
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101994868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC101994868
subclass of: SO_0000673
so part of: LOC101994868
location: complement(3209199..3209300)
location: region:3209199-3209300:-1
so has part: feature:3209199-3209300:-1:exon

position:3209199:-1
position: 3209199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3209199-3209300:-1:exon

Ddhd1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3343783..3416943
location: region:3343783-3416943:1
so has part: feature:3343783-3416943:1:exon
subclass of: SO_0000010

101990717
type: Gene
SIO_000068: ncbigene

position:3343783:1
position: 3343783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3416943:1
position: 3416943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343783-3416943:1:exon

Ddhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ddhd1
product: DDHD domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013349205.2
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343783..3344719,3378938..3379111,3379776..3379796,3385883..3385984,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416943)
location: region:3343783-3416943:1
so has part: feature:3343783-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3385883-3385984:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3343783-3344719:1:exon

position:3344719:1
position: 3344719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

position:3378938:1
position: 3378938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3379111:1
position: 3379111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

position:3379776:1
position: 3379776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3379796:1
position: 3379796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3385883-3385984:1:exon

position:3385883:1
position: 3385883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3385984:1
position: 3385984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3387209-3387337:1:exon

position:3387209:1
position: 3387209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3387337:1
position: 3387337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3390852-3390999:1:exon

position:3390852:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390999:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:3393431-3393537:1:exon

position:3393431:1
position: 3393431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3393537:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3396814-3396920:1:exon

position:3396814:1
position: 3396814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3396920:1
position: 3396920
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:3401031-3401293:1:exon

position:3401031:1
position: 3401031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3401293:1
position: 3401293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3403133-3403208:1:exon

position:3403133:1
position: 3403133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3403208:1
position: 3403208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3407426-3407575:1:exon

position:3407426:1
position: 3407426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3407575:1
position: 3407575
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:3409398-3409650:1:exon

position:3409398:1
position: 3409398
reference: sequence
type: ForwardStrandPosition
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position:3409650:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:3410516-3410707:1:exon

position:3410516:1
position: 3410516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3410707:1
position: 3410707
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:3413122-3413205:1:exon

position:3413122:1
position: 3413122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3413205:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:3416016-3416943:1:exon

position:3416016:1
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reference: sequence
type: ForwardStrandPosition
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Ddhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ddhd1
product: DDHD domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_013349207.2
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343784..3344719,3378938..3379111,3379776..3379796,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416197)
location: region:3343784-3416197:1
so has part: feature:3343784-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416197:1:exon

position:3343784:1
position: 3343784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3416197:1
position: 3416197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343784-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3413122-3413205:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ddhd1
product: DDHD domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_013349206.2
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343785..3344719,3378938..3379111,3379776..3379796,3385883..3385984,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3416016..3416943)
location: region:3343785-3416943:1
so has part: feature:3343785-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3385883-3385984:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3416016-3416943:1:exon

position:3343785:1
position: 3343785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343785-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385883-3385984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3416016-3416943:1:exon

Ddhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ddhd1
product: DDHD domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005355378.3
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3379776..3379796,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3416016..3416943)
location: region:3343930-3416943:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3416016-3416943:1:exon

position:3343930:1
position: 3343930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3416016-3416943:1:exon

Ddhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ddhd1
product: DDHD domain containing 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005355379.3
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3416016..3416943)
location: region:3343930-3416943:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3416016-3416943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3416016-3416943:1:exon

Ddhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ddhd1
product: DDHD domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005355376.3
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3385883..3385984,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3385883-3385984:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3385883-3385984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3413122-3413205:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ddhd1
product: DDHD domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005355377.3
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3413122-3413205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD1 isoform X1
translation: MNYPGRGAPRSPERNGRGGGAWELGSDAAGSFGGGGCCFEHQPGDGVPLALLHAEPLHLAPRTDDLSHLALDSCLSDENYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAPNSGGGGAAGGGPGDRKRARPGNAAARHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARTRAEGRDGDPVCGPASSSGEEDDEDRACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKPLDGKDGSGINYSVVYHLPPFSLPSLFKWRGYKESADATGLKRKRSQAVHSFKLSRNHVDWHSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEELPDERWRSYEERHLLDELYITKRRLREIEERLHGLKASSITQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPVKEPTSVSESESIANIPSPVTSPVMSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSTSQPSETSKDTVEDEKKPVASPATTTVATQTLPHSSSGFLDSAYFRLQESFFYLPQLLFPENVMQSKDDSLVELEHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHERGNDTKPSLDPI
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3379776..3379796,3385883..3385984,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3385883-3385984:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416197:1:exon

XP_013204659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385883-3385984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3413122-3413205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD1 isoform X3
translation: MNYPGRGAPRSPERNGRGGGAWELGSDAAGSFGGGGCCFEHQPGDGVPLALLHAEPLHLAPRTDDLSHLALDSCLSDENYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAPNSGGGGAAGGGPGDRKRARPGNAAARHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARTRAEGRDGDPVCGPASSSGEEDDEDRACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKPLDGKDGSGINYSVVYHLPPFSLPSLFKWRGYKESADATGLKRKRSQAVHSFKLSRNHVDWHSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEELPDERWRSYEERHLLDELYITKRRLREIEERLHGLKASSITQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPVKEPTSVSESESIANIPSPVTSPVMSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSTSQPSETSKDTVEDEKKPVASPATTTVATQTLPHSSSGFLDSALELEHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHERGNDTKPSLDPI
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3379776..3379796,3385883..3385984,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3385883-3385984:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3416016-3416197:1:exon

XP_013204660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385883-3385984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD1 isoform X4
translation: MNYPGRGAPRSPERNGRGGGAWELGSDAAGSFGGGGCCFEHQPGDGVPLALLHAEPLHLAPRTDDLSHLALDSCLSDENYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAPNSGGGGAAGGGPGDRKRARPGNAAARHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARTRAEGRDGDPVCGPASSSGEEDDEDRACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKPLDGKDGSGINYSAVHSFKLSRNHVDWHSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEELPDERWRSYEERHLLDELYITKRRLREIEERLHGLKASSITQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPVKEPTSVSESESIANIPSPVTSPVMSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSTSQPSETSKDTVEDEKKPVASPATTTVATQTLPHSSSGFLDSAYFRLQESFFYLPQLLFPENVMQSKDDSLVELEHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHERGNDTKPSLDPI
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3379776..3379796,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416197:1:exon

XP_013204661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3413122-3413205:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD1 isoform X6
translation: MNYPGRGAPRSPERNGRGGGAWELGSDAAGSFGGGGCCFEHQPGDGVPLALLHAEPLHLAPRTDDLSHLALDSCLSDENYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAPNSGGGGAAGGGPGDRKRARPGNAAARHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARTRAEGRDGDPVCGPASSSGEEDDEDRACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKPLDGKDGSGINYSAVHSFKLSRNHVDWHSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEELPDERWRSYEERHLLDELYITKRRLREIEERLHGLKASSITQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPVKEPTSVSESESIANIPSPVTSPVMSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSTSQPSETSKDTVEDEKKPVASPATTTVATQTLPHSSSGFLDSALELEHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHERGNDTKPSLDPI
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3379776..3379796,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3379776-3379796:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3416016-3416197:1:exon

XP_005355435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3379776-3379796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD1 isoform X2
translation: MNYPGRGAPRSPERNGRGGGAWELGSDAAGSFGGGGCCFEHQPGDGVPLALLHAEPLHLAPRTDDLSHLALDSCLSDENYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAPNSGGGGAAGGGPGDRKRARPGNAAARHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARTRAEGRDGDPVCGPASSSGEEDDEDRACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKPLDGKDVVYHLPPFSLPSLFKWRGYKESADATGLKRKRSQAVHSFKLSRNHVDWHSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEELPDERWRSYEERHLLDELYITKRRLREIEERLHGLKASSITQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPVKEPTSVSESESIANIPSPVTSPVMSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSTSQPSETSKDTVEDEKKPVASPATTTVATQTLPHSSSGFLDSAYFRLQESFFYLPQLLFPENVMQSKDDSLVELEHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHERGNDTKPSLDPI
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3385883..3385984,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3385883-3385984:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416197:1:exon

XP_005355433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3385883-3385984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3413122-3413205:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD1 isoform X5
translation: MNYPGRGAPRSPERNGRGGGAWELGSDAAGSFGGGGCCFEHQPGDGVPLALLHAEPLHLAPRTDDLSHLALDSCLSDENYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAPNSGGGGAAGGGPGDRKRARPGNAAARHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARTRAEGRDGDPVCGPASSSGEEDDEDRACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKPLDGKDAVHSFKLSRNHVDWHSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEELPDERWRSYEERHLLDELYITKRRLREIEERLHGLKASSITQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPVKEPTSVSESESIANIPSPVTSPVMSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSTSQPSETSKDTVEDEKKPVASPATTTVATQTLPHSSSGFLDSAYFRLQESFFYLPQLLFPENVMQSKDDSLVELEHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHERGNDTKPSLDPI
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3413122..3413205,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3413122-3413205:1:exon
so has part: feature:3416016-3416197:1:exon

XP_005355434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3413122-3413205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3416016-3416197:1:exon

Ddhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ddhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD1 isoform X7
translation: MNYPGRGAPRSPERNGRGGGAWELGSDAAGSFGGGGCCFEHQPGDGVPLALLHAEPLHLAPRTDDLSHLALDSCLSDENYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAPNSGGGGAAGGGPGDRKRARPGNAAARHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARTRAEGRDGDPVCGPASSSGEEDDEDRACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKPLDGKDAVHSFKLSRNHVDWHSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEELPDERWRSYEERHLLDELYITKRRLREIEERLHGLKASSITQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPVKEPTSVSESESIANIPSPVTSPVMSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSTSQPSETSKDTVEDEKKPVASPATTTVATQTLPHSSSGFLDSALELEHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHERGNDTKPSLDPI
SIO_010081: Ddhd1
subclass of: SO_0000673
so part of: Ddhd1
location: join(3343930..3344719,3378938..3379111,3387209..3387337,3390852..3390999,3393431..3393537,3396814..3396920,3401031..3401293,3403133..3403208,3407426..3407575,3409398..3409650,3410516..3410707,3416016..3416197)
location: region:3343930-3416197:1
so has part: feature:3343930-3344719:1:exon
so has part: feature:3378938-3379111:1:exon
so has part: feature:3387209-3387337:1:exon
so has part: feature:3390852-3390999:1:exon
so has part: feature:3393431-3393537:1:exon
so has part: feature:3396814-3396920:1:exon
so has part: feature:3401031-3401293:1:exon
so has part: feature:3403133-3403208:1:exon
so has part: feature:3407426-3407575:1:exon
so has part: feature:3409398-3409650:1:exon
so has part: feature:3410516-3410707:1:exon
so has part: feature:3416016-3416197:1:exon

XP_005355436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3343930-3344719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3378938-3379111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3387209-3387337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3390852-3390999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393431-3393537:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396814-3396920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3401031-3401293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3403133-3403208:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3407426-3407575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3409398-3409650:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3410516-3410707:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3416016-3416197:1:exon

Fermt2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fermt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3488323..3570982
location: region:3488323-3570982:1
so has part: feature:3488323-3570982:1:exon
subclass of: SO_0000010

101991555
type: Gene
SIO_000068: ncbigene

position:3488323:1
position: 3488323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3570982:1
position: 3570982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3488323-3570982:1:exon

Fermt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fermt2
product: fermitin family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005355380.2
SIO_010081: Fermt2
subclass of: SO_0000673
so part of: Fermt2
location: join(3488323..3488523,3515780..3516013,3545411..3545545,3553666..3553698,3553993..3554218,3554488..3554590,3556498..3556605,3561800..3561934,3562625..3562674,3563570..3563694,3564543..3564649,3564775..3564996,3567648..3567772,3567979..3568120,3569754..3570982)
location: region:3488323-3570982:1
so has part: feature:3488323-3488523:1:exon
so has part: feature:3515780-3516013:1:exon
so has part: feature:3545411-3545545:1:exon
so has part: feature:3553666-3553698:1:exon
so has part: feature:3553993-3554218:1:exon
so has part: feature:3554488-3554590:1:exon
so has part: feature:3556498-3556605:1:exon
so has part: feature:3561800-3561934:1:exon
so has part: feature:3562625-3562674:1:exon
so has part: feature:3563570-3563694:1:exon
so has part: feature:3564543-3564649:1:exon
so has part: feature:3564775-3564996:1:exon
so has part: feature:3567648-3567772:1:exon
so has part: feature:3567979-3568120:1:exon
so has part: feature:3569754-3570982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3488323-3488523:1:exon

position:3488523:1
position: 3488523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3515780-3516013:1:exon

position:3515780:1
position: 3515780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3516013:1
position: 3516013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3545411-3545545:1:exon

position:3545411:1
position: 3545411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3545545:1
position: 3545545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3553666-3553698:1:exon

position:3553666:1
position: 3553666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3553698:1
position: 3553698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3553993-3554218:1:exon

position:3553993:1
position: 3553993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554218:1
position: 3554218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3554488-3554590:1:exon

position:3554488:1
position: 3554488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554590:1
position: 3554590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3556498-3556605:1:exon

position:3556498:1
position: 3556498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3556605:1
position: 3556605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3561800-3561934:1:exon

position:3561800:1
position: 3561800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3561934:1
position: 3561934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3562625-3562674:1:exon

position:3562625:1
position: 3562625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562674:1
position: 3562674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3563570-3563694:1:exon

position:3563570:1
position: 3563570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3563694:1
position: 3563694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3564543-3564649:1:exon

position:3564543:1
position: 3564543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3564649:1
position: 3564649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3564775-3564996:1:exon

position:3564775:1
position: 3564775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3564996:1
position: 3564996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3567648-3567772:1:exon

position:3567648:1
position: 3567648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3567772:1
position: 3567772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3567979-3568120:1:exon

position:3567979:1
position: 3567979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3568120:1
position: 3568120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3569754-3570982:1:exon

position:3569754:1
position: 3569754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fermt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fermt2
product: fermitin family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_005355382.2
SIO_010081: Fermt2
subclass of: SO_0000673
so part of: Fermt2
location: join(3488324..3488523,3515780..3516013,3545411..3545545,3553993..3554218,3554488..3554590,3556498..3556605,3561800..3561934,3562625..3562674,3563570..3563694,3564543..3564649,3564775..3564996,3567648..3567772,3567979..3568120,3569754..3570982)
location: region:3488324-3570982:1
so has part: feature:3488324-3488523:1:exon
so has part: feature:3515780-3516013:1:exon
so has part: feature:3545411-3545545:1:exon
so has part: feature:3553993-3554218:1:exon
so has part: feature:3554488-3554590:1:exon
so has part: feature:3556498-3556605:1:exon
so has part: feature:3561800-3561934:1:exon
so has part: feature:3562625-3562674:1:exon
so has part: feature:3563570-3563694:1:exon
so has part: feature:3564543-3564649:1:exon
so has part: feature:3564775-3564996:1:exon
so has part: feature:3567648-3567772:1:exon
so has part: feature:3567979-3568120:1:exon
so has part: feature:3569754-3570982:1:exon

position:3488324:1
position: 3488324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3488324-3488523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3515780-3516013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3545411-3545545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3553993-3554218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554488-3554590:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3556498-3556605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3561800-3561934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562625-3562674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3563570-3563694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3564543-3564649:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3564775-3564996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3567648-3567772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3567979-3568120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3569754-3570982:1:exon

Fermt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fermt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fermitin family homolog 2 isoform X1
translation: MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKRTWLLKTHWTLDKYGIQADAKLEFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKPRDPTKKKKKKLDDQSEDEALELEGPLITPGSGIDVLYIGPLKGGIYSSPGLYSKTMTPTYDAHDGSPLSPTSAWFGDSALSEGNPGILAVSQPVTSPEILAKMFKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYSFFDLNPKYDAIRINQLYEQAKWALLLEEIECTEEEMMMFAALQYHINKLSIMTSENHLNNSDKDVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSREESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILSFLKMQHLNPDPQLIPEQITTDINPECLVSPRYLKKYKNKQITARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFGITHFIARFQGGKREELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFADEVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV
SIO_010081: Fermt2
subclass of: SO_0000673
so part of: Fermt2
location: join(3488367..3488523,3515780..3516013,3545411..3545545,3553666..3553698,3553993..3554218,3554488..3554590,3556498..3556605,3561800..3561934,3562625..3562674,3563570..3563694,3564543..3564649,3564775..3564996,3567648..3567772,3567979..3568120,3569754..3569927)
location: region:3488367-3569927:1
so has part: feature:3488367-3488523:1:exon
so has part: feature:3515780-3516013:1:exon
so has part: feature:3545411-3545545:1:exon
so has part: feature:3553666-3553698:1:exon
so has part: feature:3553993-3554218:1:exon
so has part: feature:3554488-3554590:1:exon
so has part: feature:3556498-3556605:1:exon
so has part: feature:3561800-3561934:1:exon
so has part: feature:3562625-3562674:1:exon
so has part: feature:3563570-3563694:1:exon
so has part: feature:3564543-3564649:1:exon
so has part: feature:3564775-3564996:1:exon
so has part: feature:3567648-3567772:1:exon
so has part: feature:3567979-3568120:1:exon
so has part: feature:3569754-3569927:1:exon

XP_005355437.1
type: Protein
SIO_000068: ncbiprotein

position:3488367:1
position: 3488367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3569927:1
position: 3569927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3488367-3488523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3515780-3516013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3545411-3545545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3553666-3553698:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3553993-3554218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554488-3554590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3556498-3556605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3561800-3561934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3562625-3562674:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3563570-3563694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3564543-3564649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3564775-3564996:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3567648-3567772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3567979-3568120:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3569754-3569927:1:exon

Fermt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fermt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fermitin family homolog 2 isoform X2
translation: MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKRTWLLKTHWTLDKYGIQADAKLEFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKPRDPTKKKKKKLDDQSEDEALELEGPLITPGSGGIYSSPGLYSKTMTPTYDAHDGSPLSPTSAWFGDSALSEGNPGILAVSQPVTSPEILAKMFKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYSFFDLNPKYDAIRINQLYEQAKWALLLEEIECTEEEMMMFAALQYHINKLSIMTSENHLNNSDKDVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSREESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILSFLKMQHLNPDPQLIPEQITTDINPECLVSPRYLKKYKNKQITARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFGITHFIARFQGGKREELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFADEVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV
SIO_010081: Fermt2
subclass of: SO_0000673
so part of: Fermt2
location: join(3488367..3488523,3515780..3516013,3545411..3545545,3553993..3554218,3554488..3554590,3556498..3556605,3561800..3561934,3562625..3562674,3563570..3563694,3564543..3564649,3564775..3564996,3567648..3567772,3567979..3568120,3569754..3569927)
location: region:3488367-3569927:1
so has part: feature:3488367-3488523:1:exon
so has part: feature:3515780-3516013:1:exon
so has part: feature:3545411-3545545:1:exon
so has part: feature:3553993-3554218:1:exon
so has part: feature:3554488-3554590:1:exon
so has part: feature:3556498-3556605:1:exon
so has part: feature:3561800-3561934:1:exon
so has part: feature:3562625-3562674:1:exon
so has part: feature:3563570-3563694:1:exon
so has part: feature:3564543-3564649:1:exon
so has part: feature:3564775-3564996:1:exon
so has part: feature:3567648-3567772:1:exon
so has part: feature:3567979-3568120:1:exon
so has part: feature:3569754-3569927:1:exon

XP_005355439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3488367-3488523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3515780-3516013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3545411-3545545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3553993-3554218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554488-3554590:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3556498-3556605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3561800-3561934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562625-3562674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3563570-3563694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3564543-3564649:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3564775-3564996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3567648-3567772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3567979-3568120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3569754-3569927:1:exon

Gnpnat1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gnpnat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3638814..3653308
location: region:3638814-3653308:1
so has part: feature:3638814-3653308:1:exon
subclass of: SO_0000010

101992410
type: Gene
SIO_000068: ncbigene

position:3638814:1
position: 3638814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3653308:1
position: 3653308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3638814-3653308:1:exon

Gnpnat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gnpnat1
product: glucosamine-phosphate N-acetyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_005355384.3
SIO_010081: Gnpnat1
subclass of: SO_0000673
so part of: Gnpnat1
location: join(3638814..3638939,3644543..3644710,3646880..3646942,3648298..3648425,3649220..3649281,3652257..3653308)
location: region:3638814-3653308:1
so has part: feature:3638814-3638939:1:exon
so has part: feature:3644543-3644710:1:exon
so has part: feature:3646880-3646942:1:exon
so has part: feature:3648298-3648425:1:exon
so has part: feature:3649220-3649281:1:exon
so has part: feature:3652257-3653308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3638814-3638939:1:exon

position:3638939:1
position: 3638939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3644543-3644710:1:exon

position:3644543:1
position: 3644543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3644710:1
position: 3644710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3646880-3646942:1:exon

position:3646880:1
position: 3646880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3646942:1
position: 3646942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3648298-3648425:1:exon

position:3648298:1
position: 3648298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3648425:1
position: 3648425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3649220-3649281:1:exon

position:3649220:1
position: 3649220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3649281:1
position: 3649281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3652257-3653308:1:exon

position:3652257:1
position: 3652257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gnpnat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gnpnat1
product: glucosamine-phosphate N-acetyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005355385.3
SIO_010081: Gnpnat1
subclass of: SO_0000673
so part of: Gnpnat1
location: join(3638814..3638934,3644543..3644710,3646880..3646942,3648298..3648425,3649220..3649281,3652257..3653308)
location: region:3638814-3653308:1
so has part: feature:3638814-3638934:1:exon
so has part: feature:3644543-3644710:1:exon
so has part: feature:3646880-3646942:1:exon
so has part: feature:3648298-3648425:1:exon
so has part: feature:3649220-3649281:1:exon
so has part: feature:3652257-3653308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3638814-3638934:1:exon

position:3638934:1
position: 3638934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3644543-3644710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3646880-3646942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3648298-3648425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3649220-3649281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3652257-3653308:1:exon

Gnpnat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gnpnat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine 6-phosphate N-acetyltransferase
translation: MKPDETPMFDPSLLEEVDWSQNTATFSPAISPKNSGEGLVLRPLCTADLNKGFFKVLGQLTETGVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVAPATLIIEHKFIHSCAKRGRVEDVVVSDACRGKQLGKLLLSTLTLLSKKLNCYKIALECLPQNVGFYQKFGYTVSEENYMCRRYLK
SIO_010081: Gnpnat1
subclass of: SO_0000673
so part of: Gnpnat1
location: join(3644557..3644710,3646880..3646942,3648298..3648425,3649220..3649281,3652257..3652404)
location: region:3644557-3652404:1
so has part: feature:3644557-3644710:1:exon
so has part: feature:3646880-3646942:1:exon
so has part: feature:3648298-3648425:1:exon
so has part: feature:3649220-3649281:1:exon
so has part: feature:3652257-3652404:1:exon

XP_005355441.1
type: Protein
SIO_000068: ncbiprotein

position:3644557:1
position: 3644557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3652404:1
position: 3652404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3644557-3644710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3646880-3646942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3648298-3648425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3649220-3649281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3652257-3652404:1:exon

Gnpnat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gnpnat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine 6-phosphate N-acetyltransferase
translation: MKPDETPMFDPSLLEEVDWSQNTATFSPAISPKNSGEGLVLRPLCTADLNKGFFKVLGQLTETGVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVAPATLIIEHKFIHSCAKRGRVEDVVVSDACRGKQLGKLLLSTLTLLSKKLNCYKIALECLPQNVGFYQKFGYTVSEENYMCRRYLK
SIO_010081: Gnpnat1
subclass of: SO_0000673
so part of: Gnpnat1
location: join(3644557..3644710,3646880..3646942,3648298..3648425,3649220..3649281,3652257..3652404)
location: region:3644557-3652404:1
so has part: feature:3644557-3644710:1:exon
so has part: feature:3646880-3646942:1:exon
so has part: feature:3648298-3648425:1:exon
so has part: feature:3649220-3649281:1:exon
so has part: feature:3652257-3652404:1:exon

XP_005355442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3644557-3644710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3646880-3646942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3648298-3648425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3649220-3649281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3652257-3652404:1:exon

Styx
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Styx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3653969..3688506)
location: region:3653969-3688506:-1
so has part: feature:3653969-3688506:-1:exon
subclass of: SO_0000010

101992867
type: Gene
SIO_000068: ncbigene

position:3653969:-1
position: 3653969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3688506:-1
position: 3688506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3653969-3688506:-1:exon

Styx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Styx
product: serine/threonine/tyrosine interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005355386.2
SIO_010081: Styx
subclass of: SO_0000673
so part of: Styx
location: complement(join(3653969..3657212,3659712..3659805,3662938..3663010,3666216..3666266,3666340..3666379,3667103..3667139,3667811..3667871,3672127..3672224,3676252..3676305,3677693..3677725,3688180..3688506))
location: region:3653969-3688506:-1
so has part: feature:3688180-3688506:-1:exon
so has part: feature:3677693-3677725:-1:exon
so has part: feature:3676252-3676305:-1:exon
so has part: feature:3672127-3672224:-1:exon
so has part: feature:3667811-3667871:-1:exon
so has part: feature:3667103-3667139:-1:exon
so has part: feature:3666340-3666379:-1:exon
so has part: feature:3666216-3666266:-1:exon
so has part: feature:3662938-3663010:-1:exon
so has part: feature:3659712-3659805:-1:exon
so has part: feature:3653969-3657212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3688180-3688506:-1:exon

position:3688180:-1
position: 3688180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3677693-3677725:-1:exon

position:3677693:-1
position: 3677693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3677725:-1
position: 3677725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3676252-3676305:-1:exon

position:3676252:-1
position: 3676252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676305:-1
position: 3676305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3672127-3672224:-1:exon

position:3672127:-1
position: 3672127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672224:-1
position: 3672224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3667811-3667871:-1:exon

position:3667811:-1
position: 3667811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3667871:-1
position: 3667871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3667103-3667139:-1:exon

position:3667103:-1
position: 3667103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3667139:-1
position: 3667139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3666340-3666379:-1:exon

position:3666340:-1
position: 3666340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3666379:-1
position: 3666379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3666216-3666266:-1:exon

position:3666216:-1
position: 3666216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3666266:-1
position: 3666266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3662938-3663010:-1:exon

position:3662938:-1
position: 3662938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3663010:-1
position: 3663010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3659712-3659805:-1:exon

position:3659712:-1
position: 3659712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659805:-1
position: 3659805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3653969-3657212:-1:exon

position:3657212:-1
position: 3657212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Styx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Styx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine/tyrosine-interacting protein
translation: MEDMKLEFPSLPQCKDDTEEWTYPMRREMQEVLPGLFLGPYSSAMKSKLPILQRHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQNGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIYLAKLTIQMMSPLQIERSLSVHSGTTGSLKRTHEEEEDFGNMQVAAAQNG
SIO_010081: Styx
subclass of: SO_0000673
so part of: Styx
location: complement(join(3657139..3657212,3659712..3659805,3662938..3663010,3666216..3666266,3666340..3666379,3667103..3667139,3667811..3667871,3672127..3672224,3676252..3676305,3677693..3677725,3688180..3688236))
location: region:3657139-3688236:-1
so has part: feature:3688180-3688236:-1:exon
so has part: feature:3677693-3677725:-1:exon
so has part: feature:3676252-3676305:-1:exon
so has part: feature:3672127-3672224:-1:exon
so has part: feature:3667811-3667871:-1:exon
so has part: feature:3667103-3667139:-1:exon
so has part: feature:3666340-3666379:-1:exon
so has part: feature:3666216-3666266:-1:exon
so has part: feature:3662938-3663010:-1:exon
so has part: feature:3659712-3659805:-1:exon
so has part: feature:3657139-3657212:-1:exon

XP_005355443.1
type: Protein
SIO_000068: ncbiprotein

position:3657139:-1
position: 3657139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3688236:-1
position: 3688236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3688180-3688236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3677693-3677725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3676252-3676305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3672127-3672224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667811-3667871:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3667103-3667139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3666340-3666379:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3666216-3666266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3662938-3663010:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3659712-3659805:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3657139-3657212:-1:exon

Psmc6
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Psmc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3690520..3715849)
location: region:3690520-3715849:-1
so has part: feature:3690520-3715849:-1:exon
subclass of: SO_0000010

101995155
type: Gene
SIO_000068: ncbigene

position:3690520:-1
position: 3690520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715849:-1
position: 3715849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690520-3715849:-1:exon

Psmc6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Psmc6
product: proteasome 26S subunit, ATPase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349202.1
SIO_010081: Psmc6
subclass of: SO_0000673
so part of: Psmc6
location: complement(join(3690520..3691005,3699085..3699180,3699289..3699409,3702503..3702564,3702913..3703036,3703119..3703180,3706202..3706289,3709421..3709535,3710153..3710220,3714134..3714186,3714706..3714745,3714836..3714915,3715716..3715849))
location: region:3690520-3715849:-1
so has part: feature:3715716-3715849:-1:exon
so has part: feature:3714836-3714915:-1:exon
so has part: feature:3714706-3714745:-1:exon
so has part: feature:3714134-3714186:-1:exon
so has part: feature:3710153-3710220:-1:exon
so has part: feature:3709421-3709535:-1:exon
so has part: feature:3706202-3706289:-1:exon
so has part: feature:3703119-3703180:-1:exon
so has part: feature:3702913-3703036:-1:exon
so has part: feature:3702503-3702564:-1:exon
so has part: feature:3699289-3699409:-1:exon
so has part: feature:3699085-3699180:-1:exon
so has part: feature:3690520-3691005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3715716-3715849:-1:exon

position:3715716:-1
position: 3715716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3714836-3714915:-1:exon

position:3714836:-1
position: 3714836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714915:-1
position: 3714915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3714706-3714745:-1:exon

position:3714706:-1
position: 3714706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714745:-1
position: 3714745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3714134-3714186:-1:exon

position:3714134:-1
position: 3714134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714186:-1
position: 3714186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3710153-3710220:-1:exon

position:3710153:-1
position: 3710153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3710220:-1
position: 3710220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3709421-3709535:-1:exon

position:3709421:-1
position: 3709421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3709535:-1
position: 3709535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3706202-3706289:-1:exon

position:3706202:-1
position: 3706202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3706289:-1
position: 3706289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3703119-3703180:-1:exon

position:3703119:-1
position: 3703119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703180:-1
position: 3703180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3702913-3703036:-1:exon

position:3702913:-1
position: 3702913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703036:-1
position: 3703036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3702503-3702564:-1:exon

position:3702503:-1
position: 3702503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3702564:-1
position: 3702564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3699289-3699409:-1:exon

position:3699289:-1
position: 3699289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699409:-1
position: 3699409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3699085-3699180:-1:exon

position:3699085:-1
position: 3699085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699180:-1
position: 3699180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3690520-3691005:-1:exon

position:3691005:-1
position: 3691005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Psmc6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Psmc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 10B
translation: MAIPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMPTNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIGKKVECMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
SIO_010081: Psmc6
subclass of: SO_0000673
so part of: Psmc6
location: complement(join(3690887..3691005,3699085..3699180,3699289..3699409,3702503..3702564,3702913..3703036,3703119..3703180,3706202..3706289,3709421..3709535,3710153..3710220,3714134..3714186,3714706..3714745,3714836..3714915,3715716..3715842))
location: region:3690887-3715842:-1
so has part: feature:3715716-3715842:-1:exon
so has part: feature:3714836-3714915:-1:exon
so has part: feature:3714706-3714745:-1:exon
so has part: feature:3714134-3714186:-1:exon
so has part: feature:3710153-3710220:-1:exon
so has part: feature:3709421-3709535:-1:exon
so has part: feature:3706202-3706289:-1:exon
so has part: feature:3703119-3703180:-1:exon
so has part: feature:3702913-3703036:-1:exon
so has part: feature:3702503-3702564:-1:exon
so has part: feature:3699289-3699409:-1:exon
so has part: feature:3699085-3699180:-1:exon
so has part: feature:3690887-3691005:-1:exon

XP_013204656.1
type: Protein
SIO_000068: ncbiprotein

position:3690887:-1
position: 3690887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715842:-1
position: 3715842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3715716-3715842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3714836-3714915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3714706-3714745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3714134-3714186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3710153-3710220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3709421-3709535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3706202-3706289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3703119-3703180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3702913-3703036:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3702503-3702564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3699289-3699409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3699085-3699180:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3690887-3691005:-1:exon

Ero1a
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ero1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3728583..3772978
location: region:3728583-3772978:1
so has part: feature:3728583-3772978:1:exon
subclass of: SO_0000010

101993150
type: Gene
SIO_000068: ncbigene

position:3728583:1
position: 3728583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772978:1
position: 3772978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3728583-3772978:1:exon

Ero1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ero1a
product: endoplasmic reticulum oxidoreductase 1 alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_005355387.2
SIO_010081: Ero1a
subclass of: SO_0000673
so part of: Ero1a
location: join(3728583..3728755,3741450..3741569,3742517..3742600,3744305..3744343,3745197..3745270,3745352..3745425,3747662..3747782,3749006..3749052,3751748..3751759,3756826..3756852,3756974..3757066,3762645..3762891,3763534..3763603,3767590..3767676,3767750..3767883,3770021..3772978)
location: region:3728583-3772978:1
so has part: feature:3728583-3728755:1:exon
so has part: feature:3741450-3741569:1:exon
so has part: feature:3742517-3742600:1:exon
so has part: feature:3744305-3744343:1:exon
so has part: feature:3745197-3745270:1:exon
so has part: feature:3745352-3745425:1:exon
so has part: feature:3747662-3747782:1:exon
so has part: feature:3749006-3749052:1:exon
so has part: feature:3751748-3751759:1:exon
so has part: feature:3756826-3756852:1:exon
so has part: feature:3756974-3757066:1:exon
so has part: feature:3762645-3762891:1:exon
so has part: feature:3763534-3763603:1:exon
so has part: feature:3767590-3767676:1:exon
so has part: feature:3767750-3767883:1:exon
so has part: feature:3770021-3772978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3728583-3728755:1:exon

position:3728755:1
position: 3728755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3741450-3741569:1:exon

position:3741450:1
position: 3741450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3741569:1
position: 3741569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3742517-3742600:1:exon

position:3742517:1
position: 3742517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3742600:1
position: 3742600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3744305-3744343:1:exon

position:3744305:1
position: 3744305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3744343:1
position: 3744343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3745197-3745270:1:exon

position:3745197:1
position: 3745197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3745270:1
position: 3745270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3745352-3745425:1:exon

position:3745352:1
position: 3745352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3745425:1
position: 3745425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3747662-3747782:1:exon

position:3747662:1
position: 3747662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3747782:1
position: 3747782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3749006-3749052:1:exon

position:3749006:1
position: 3749006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3749052:1
position: 3749052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3751748-3751759:1:exon

position:3751748:1
position: 3751748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3751759:1
position: 3751759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3756826-3756852:1:exon

position:3756826:1
position: 3756826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3756852:1
position: 3756852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3756974-3757066:1:exon

position:3756974:1
position: 3756974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757066:1
position: 3757066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3762645-3762891:1:exon

position:3762645:1
position: 3762645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762891:1
position: 3762891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3763534-3763603:1:exon

position:3763534:1
position: 3763534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763603:1
position: 3763603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3767590-3767676:1:exon

position:3767590:1
position: 3767590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767676:1
position: 3767676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3767750-3767883:1:exon

position:3767750:1
position: 3767750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767883:1
position: 3767883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3770021-3772978:1:exon

position:3770021:1
position: 3770021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ero1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ero1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERO1-like protein alpha
translation: MGRGWGLLVGLLGALWLLRSGHGEERRPETAAQRCFCQVSGYLDDCTCDVETIDKFNNYKLFPRLQRLLESDYFRYYKVNLKKPCPFWNDISQCGRRDCAVKPCHSDEVPDGIKSASYKYSEEANLIEECEQAERLGAVDESLSEETQKAVLQWTKHDDSSDSFCEVDDIQSPDAEYVDLLLNPERYTGYKGPDAWRIWSVIYEENCFKPQTIQRPLNPLASGQGKSKENTFYSWLEGLCVEKRAFYRLISGLHASINVHLSARYLLQDTWLEKKWGHNVTEFQQRFDGVLTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGDKVQDAENKALLLEILHEIKSFPLHFDENSFFAGDKNEAHKLKEDFRQHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKLIANMPESGPSYEFQLTRQEIVSLFNAFGRISTSVRELENFRHLLQNVH
SIO_010081: Ero1a
subclass of: SO_0000673
so part of: Ero1a
location: join(3728642..3728755,3741450..3741569,3742517..3742600,3744305..3744343,3745197..3745270,3745352..3745425,3747662..3747782,3749006..3749052,3751748..3751759,3756826..3756852,3756974..3757066,3762645..3762891,3763534..3763603,3767590..3767676,3767750..3767883,3770021..3770081)
location: region:3728642-3770081:1
so has part: feature:3728642-3728755:1:exon
so has part: feature:3741450-3741569:1:exon
so has part: feature:3742517-3742600:1:exon
so has part: feature:3744305-3744343:1:exon
so has part: feature:3745197-3745270:1:exon
so has part: feature:3745352-3745425:1:exon
so has part: feature:3747662-3747782:1:exon
so has part: feature:3749006-3749052:1:exon
so has part: feature:3751748-3751759:1:exon
so has part: feature:3756826-3756852:1:exon
so has part: feature:3756974-3757066:1:exon
so has part: feature:3762645-3762891:1:exon
so has part: feature:3763534-3763603:1:exon
so has part: feature:3767590-3767676:1:exon
so has part: feature:3767750-3767883:1:exon
so has part: feature:3770021-3770081:1:exon

XP_005355444.1
type: Protein
SIO_000068: ncbiprotein

position:3728642:1
position: 3728642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3770081:1
position: 3770081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3728642-3728755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3741450-3741569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3742517-3742600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3744305-3744343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3745197-3745270:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3745352-3745425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3747662-3747782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749006-3749052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3751748-3751759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3756826-3756852:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3756974-3757066:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3762645-3762891:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3763534-3763603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3767590-3767676:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3767750-3767883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3770021-3770081:1:exon

Gpr137c
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Gpr137c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3776021..3839593)
location: region:3776021-3839593:-1
so has part: feature:3776021-3839593:-1:exon
subclass of: SO_0000010

101993438
type: Gene
SIO_000068: ncbigene

position:3776021:-1
position: 3776021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3839593:-1
position: 3839593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3776021-3839593:-1:exon

Gpr137c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Gpr137c
product: G protein-coupled receptor 137C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_005355388.3
SIO_010081: Gpr137c
subclass of: SO_0000673
so part of: Gpr137c
location: complement(join(3776021..3776198,3776997..3777115,3777267..3777392,3778770..3778919,3811820..3812048,3814209..3814252,3838911..3839593))
location: region:3776021-3839593:-1
so has part: feature:3838911-3839593:-1:exon
so has part: feature:3814209-3814252:-1:exon
so has part: feature:3811820-3812048:-1:exon
so has part: feature:3778770-3778919:-1:exon
so has part: feature:3777267-3777392:-1:exon
so has part: feature:3776997-3777115:-1:exon
so has part: feature:3776021-3776198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3838911-3839593:-1:exon

position:3838911:-1
position: 3838911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3814209-3814252:-1:exon

position:3814209:-1
position: 3814209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3814252:-1
position: 3814252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3811820-3812048:-1:exon

position:3811820:-1
position: 3811820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3812048:-1
position: 3812048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3778770-3778919:-1:exon

position:3778770:-1
position: 3778770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3778919:-1
position: 3778919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3777267-3777392:-1:exon

position:3777267:-1
position: 3777267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3777392:-1
position: 3777392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3776997-3777115:-1:exon

position:3776997:-1
position: 3776997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3777115:-1
position: 3777115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3776021-3776198:-1:exon

position:3776198:-1
position: 3776198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gpr137c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Gpr137c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integral membrane protein GPR137C
translation: MRVLVSGPAPAAVPTAGREPLTPGGGAVAASGAAVPGSVQLALSVLHALLYAALFAFAYLQLWRLLLYRERRLSYQSLCLFLCLAWAALRTTLFSAAFSLSGSLPVLRPPSRLHFFPHWLLYCFPSCLQFSTLCLLNLYLAEVICKVRCATELDKHKILLHLGFILASFLFLAVNLTCAMLVHGDVPENQLKWTVFVRALINDSLFILCAISLVSYICKITKMSSANVYLESKGMSLCQTVVVGSVVILLYSSRACYNLVVIAISQDTLESPFNYGWDNLSDKARGEDGNGGDYIVFGMVLFLWEHVPAWSVVLFFRAQRLNQNLAPAGMVSSHSYSSRAFFFDNPRRYDSDDDLPRLGSSREGSLSNSQSLGWYGTMTGCGSGTYTVTPPLNGPVTDTAPLLFTCSNLDLRSHHRFYVTPQN
SIO_010081: Gpr137c
subclass of: SO_0000673
so part of: Gpr137c
location: complement(join(3776021..3776198,3776997..3777115,3777267..3777392,3778770..3778919,3811820..3812048,3814209..3814252,3838911..3839336))
location: region:3776021-3839336:-1
so has part: feature:3838911-3839336:-1:exon
so has part: feature:3814209-3814252:-1:exon
so has part: feature:3811820-3812048:-1:exon
so has part: feature:3778770-3778919:-1:exon
so has part: feature:3777267-3777392:-1:exon
so has part: feature:3776997-3777115:-1:exon
so has part: feature:3776021-3776198:-1:exon

XP_005355445.1
type: Protein
SIO_000068: ncbiprotein

position:3839336:-1
position: 3839336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838911-3839336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3814209-3814252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811820-3812048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3778770-3778919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3777267-3777392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3776997-3777115:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3776021-3776198:-1:exon

Txndc16
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Txndc16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3839931..3927155
location: region:3839931-3927155:1
so has part: feature:3839931-3927155:1:exon
subclass of: SO_0000010

101993720
type: Gene
SIO_000068: ncbigene

position:3839931:1
position: 3839931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3927155:1
position: 3927155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3839931-3927155:1:exon

Txndc16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Txndc16
product: thioredoxin domain containing 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005355389.3
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3839931..3840010,3840327..3840377,3842118..3842261,3842641..3842735,3849890..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3916222..3916382,3917540..3917730,3925869..3927155)
location: region:3839931-3927155:1
so has part: feature:3839931-3840010:1:exon
so has part: feature:3840327-3840377:1:exon
so has part: feature:3842118-3842261:1:exon
so has part: feature:3842641-3842735:1:exon
so has part: feature:3849890-3850127:1:exon
so has part: feature:3851583-3851665:1:exon
so has part: feature:3855728-3855801:1:exon
so has part: feature:3856495-3856569:1:exon
so has part: feature:3876443-3876564:1:exon
so has part: feature:3886365-3886455:1:exon
so has part: feature:3890048-3890198:1:exon
so has part: feature:3895028-3895194:1:exon
so has part: feature:3895890-3895950:1:exon
so has part: feature:3899341-3899464:1:exon
so has part: feature:3902026-3902169:1:exon
so has part: feature:3902690-3902749:1:exon
so has part: feature:3910690-3910858:1:exon
so has part: feature:3911144-3911280:1:exon
so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3916222-3916382:1:exon
so has part: feature:3917540-3917730:1:exon
so has part: feature:3925869-3927155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3839931-3840010:1:exon

position:3840010:1
position: 3840010
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:3840327-3840377:1:exon

position:3840327:1
position: 3840327
reference: sequence
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position:3840377:1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:3842118-3842261:1:exon

position:3842118:1
position: 3842118
reference: sequence
type: ForwardStrandPosition
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position:3842261:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:3842641-3842735:1:exon

position:3842641:1
position: 3842641
reference: sequence
type: ForwardStrandPosition
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position:3842735:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:3849890-3850127:1:exon

position:3849890:1
position: 3849890
reference: sequence
type: ForwardStrandPosition
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position:3850127:1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:3851583-3851665:1:exon

position:3851583:1
position: 3851583
reference: sequence
type: ForwardStrandPosition
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position:3851665:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:3855728-3855801:1:exon

position:3855728:1
position: 3855728
reference: sequence
type: ForwardStrandPosition
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position:3855801:1
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urn:…
SIO_000300: 8
SIO_000628: feature:3856495-3856569:1:exon

position:3856495:1
position: 3856495
reference: sequence
type: ForwardStrandPosition
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position:3856569:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:3876443-3876564:1:exon

position:3876443:1
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reference: sequence
type: ForwardStrandPosition
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position:3876564:1
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urn:…
SIO_000300: 10
SIO_000628: feature:3886365-3886455:1:exon

position:3886365:1
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reference: sequence
type: ForwardStrandPosition
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position:3886455:1
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urn:…
SIO_000300: 11
SIO_000628: feature:3890048-3890198:1:exon

position:3890048:1
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reference: sequence
type: ForwardStrandPosition
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position:3890198:1
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urn:…
SIO_000300: 12
SIO_000628: feature:3895028-3895194:1:exon

position:3895028:1
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reference: sequence
type: ForwardStrandPosition
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position:3895194:1
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urn:…
SIO_000300: 13
SIO_000628: feature:3895890-3895950:1:exon

position:3895890:1
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type: ForwardStrandPosition
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position:3895950:1
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urn:…
SIO_000300: 14
SIO_000628: feature:3899341-3899464:1:exon

position:3899341:1
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reference: sequence
type: ForwardStrandPosition
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position:3899464:1
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urn:…
SIO_000300: 15
SIO_000628: feature:3902026-3902169:1:exon

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position:3902169:1
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urn:…
SIO_000300: 16
SIO_000628: feature:3902690-3902749:1:exon

position:3902690:1
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reference: sequence
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position:3902749:1
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urn:…
SIO_000300: 17
SIO_000628: feature:3910690-3910858:1:exon

position:3910690:1
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reference: sequence
type: ForwardStrandPosition
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position:3910858:1
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urn:…
SIO_000300: 18
SIO_000628: feature:3911144-3911280:1:exon

position:3911144:1
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reference: sequence
type: ForwardStrandPosition
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position:3911280:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:3911931-3912015:1:exon

position:3911931:1
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reference: sequence
type: ForwardStrandPosition
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position:3912015:1
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urn:…
SIO_000300: 20
SIO_000628: feature:3913743-3913881:1:exon

position:3913743:1
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position:3913881:1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:3916222-3916382:1:exon

position:3916222:1
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reference: sequence
type: ForwardStrandPosition
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position:3916382:1
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urn:…
SIO_000300: 22
SIO_000628: feature:3917540-3917730:1:exon

position:3917540:1
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reference: sequence
type: ForwardStrandPosition
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position:3917730:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:3925869-3927155:1:exon

position:3925869:1
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reference: sequence
type: ForwardStrandPosition
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Txndc16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Txndc16
product: thioredoxin domain containing 16, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_026783292.1
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3839931..3840010,3840327..3840377,3842118..3842261,3842641..3842735,3849890..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3917540..3917730,3925869..3926266)
location: region:3839931-3926266:1
so has part: feature:3839931-3840010:1:exon
so has part: feature:3840327-3840377:1:exon
so has part: feature:3842118-3842261:1:exon
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so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3917540-3917730:1:exon
so has part: feature:3925869-3926266:1:exon

position:3926266:1
position: 3926266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3839931-3840010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3840327-3840377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3842118-3842261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3842641-3842735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3849890-3850127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3851583-3851665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3855728-3855801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3856495-3856569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3876443-3876564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3886365-3886455:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3890048-3890198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3895028-3895194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3895890-3895950:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3899341-3899464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3902026-3902169:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3902690-3902749:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3910690-3910858:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3911144-3911280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3911931-3912015:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3913743-3913881:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3917540-3917730:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3925869-3926266:1:exon

Txndc16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Txndc16
product: thioredoxin domain containing 16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026783291.1
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3839958..3840010,3840324..3840377,3842118..3842261,3842641..3842735,3849890..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3916222..3916382,3917540..3917730,3925869..3927155)
location: region:3839958-3927155:1
so has part: feature:3839958-3840010:1:exon
so has part: feature:3840324-3840377:1:exon
so has part: feature:3842118-3842261:1:exon
so has part: feature:3842641-3842735:1:exon
so has part: feature:3849890-3850127:1:exon
so has part: feature:3851583-3851665:1:exon
so has part: feature:3855728-3855801:1:exon
so has part: feature:3856495-3856569:1:exon
so has part: feature:3876443-3876564:1:exon
so has part: feature:3886365-3886455:1:exon
so has part: feature:3890048-3890198:1:exon
so has part: feature:3895028-3895194:1:exon
so has part: feature:3895890-3895950:1:exon
so has part: feature:3899341-3899464:1:exon
so has part: feature:3902026-3902169:1:exon
so has part: feature:3902690-3902749:1:exon
so has part: feature:3910690-3910858:1:exon
so has part: feature:3911144-3911280:1:exon
so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3916222-3916382:1:exon
so has part: feature:3917540-3917730:1:exon
so has part: feature:3925869-3927155:1:exon

position:3839958:1
position: 3839958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3839958-3840010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3840324-3840377:1:exon

position:3840324:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3842118-3842261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3842641-3842735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3849890-3850127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3851583-3851665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3855728-3855801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3856495-3856569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3876443-3876564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3886365-3886455:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3890048-3890198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3895028-3895194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3895890-3895950:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3899341-3899464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3902026-3902169:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3902690-3902749:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3910690-3910858:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3911144-3911280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3911931-3912015:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3913743-3913881:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3916222-3916382:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3917540-3917730:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3925869-3927155:1:exon

Txndc16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Txndc16
product: thioredoxin domain containing 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_026783290.1
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3840017..3840153,3840327..3840377,3842118..3842261,3842636..3842735,3849890..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3916222..3916382,3917540..3917730,3925869..3927155)
location: region:3840017-3927155:1
so has part: feature:3840017-3840153:1:exon
so has part: feature:3840327-3840377:1:exon
so has part: feature:3842118-3842261:1:exon
so has part: feature:3842636-3842735:1:exon
so has part: feature:3849890-3850127:1:exon
so has part: feature:3851583-3851665:1:exon
so has part: feature:3855728-3855801:1:exon
so has part: feature:3856495-3856569:1:exon
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so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3916222-3916382:1:exon
so has part: feature:3917540-3917730:1:exon
so has part: feature:3925869-3927155:1:exon

position:3840017:1
position: 3840017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3840017-3840153:1:exon

position:3840153:1
position: 3840153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3840327-3840377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3842118-3842261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3842636-3842735:1:exon

position:3842636:1
position: 3842636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3849890-3850127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3851583-3851665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3855728-3855801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3856495-3856569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3876443-3876564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3886365-3886455:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3890048-3890198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3895028-3895194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3895890-3895950:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3899341-3899464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3902026-3902169:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3902690-3902749:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3910690-3910858:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3911144-3911280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3911931-3912015:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3913743-3913881:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3916222-3916382:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3917540-3917730:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3925869-3927155:1:exon

Txndc16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Txndc16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin domain-containing protein 16 isoform X1
translation: MMSSGIGVFRAGVALLVMCGFSKSAEDALPELSPEQYFSTLQPGKASLAYFCQVGSPSNSVFLEELKEAVRPLQDHGISVSKVNCVQEEASRYCGKEEGLMKAYLFRGSILLREFPTDTLFDVDAIVAHVLFALLFNEVKYVTILEDLHNIENSLKGKANMIFSYVEAIGTPEHRAVMEAAFVYGTSYQFALTTEVALLEDIGSEDIGRAHLYFCHCELALDLTERCRRTLMEQPLTTLNIHIFVKTMKAPLLMEVAEDPQQVSTIHLQLGLPLVFIISQQATYEADRRTAEWVAWRLLGKAGVLLLSRDSMDMNIPQHANVAFRRAEKEVPVEFLSLNDADLIVSHVKNNMHIEEIQEDEDGDEEGPDLAIQDDEVAETVYRDRKRRLPLELTVELTQETFNSTVMTSDSIVFFYATWHAVSMAFLQSYIDVAIKLKGTSTILLTRINCADWSDVCTKQNVTAFPAVKLYKEGESPVSYAGMLGTKDLLKFIQINRISCPVNIASIQEAEKYLHGELYKDLFSFTSVSVLGLFSPAMISAKEHFREAGKQLRGSVVTGVYSEDDVWILSNKYGAPLPAMLLARPREGRIESVPLASTSMQDMAQILANAPLEAFPEIMVENLPAYLRLQRPLLILFSDGSINPQYRNIVLALMRQKQLDSFTPCWLNLKNTPVGRGILKAYFGFLPPLPQLLLVNLHSGGQVYAFPSSQSITEQNLRLWLRKLGSGLENPITTLSAQEWKPPLPAFDFLSMMDAPMSQPPTKKVLECMKEKGVQESAEQPQGAPLTTRRGPAEVLRIKHWNKSNWPKEAEESSQHHKEL
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3849965..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3916222..3916382,3917540..3917730,3925869..3926134)
location: region:3849965-3926134:1
so has part: feature:3849965-3850127:1:exon
so has part: feature:3851583-3851665:1:exon
so has part: feature:3855728-3855801:1:exon
so has part: feature:3856495-3856569:1:exon
so has part: feature:3876443-3876564:1:exon
so has part: feature:3886365-3886455:1:exon
so has part: feature:3890048-3890198:1:exon
so has part: feature:3895028-3895194:1:exon
so has part: feature:3895890-3895950:1:exon
so has part: feature:3899341-3899464:1:exon
so has part: feature:3902026-3902169:1:exon
so has part: feature:3902690-3902749:1:exon
so has part: feature:3910690-3910858:1:exon
so has part: feature:3911144-3911280:1:exon
so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3916222-3916382:1:exon
so has part: feature:3917540-3917730:1:exon
so has part: feature:3925869-3926134:1:exon

XP_026639091.1
type: Protein
SIO_000068: ncbiprotein

position:3849965:1
position: 3849965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3926134:1
position: 3926134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849965-3850127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3851583-3851665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3855728-3855801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3856495-3856569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3876443-3876564:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3886365-3886455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3890048-3890198:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3895028-3895194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3895890-3895950:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3899341-3899464:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3902026-3902169:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3902690-3902749:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3910690-3910858:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3911144-3911280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3911931-3912015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3913743-3913881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3916222-3916382:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3917540-3917730:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3925869-3926134:1:exon

Txndc16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Txndc16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin domain-containing protein 16 isoform X1
translation: MMSSGIGVFRAGVALLVMCGFSKSAEDALPELSPEQYFSTLQPGKASLAYFCQVGSPSNSVFLEELKEAVRPLQDHGISVSKVNCVQEEASRYCGKEEGLMKAYLFRGSILLREFPTDTLFDVDAIVAHVLFALLFNEVKYVTILEDLHNIENSLKGKANMIFSYVEAIGTPEHRAVMEAAFVYGTSYQFALTTEVALLEDIGSEDIGRAHLYFCHCELALDLTERCRRTLMEQPLTTLNIHIFVKTMKAPLLMEVAEDPQQVSTIHLQLGLPLVFIISQQATYEADRRTAEWVAWRLLGKAGVLLLSRDSMDMNIPQHANVAFRRAEKEVPVEFLSLNDADLIVSHVKNNMHIEEIQEDEDGDEEGPDLAIQDDEVAETVYRDRKRRLPLELTVELTQETFNSTVMTSDSIVFFYATWHAVSMAFLQSYIDVAIKLKGTSTILLTRINCADWSDVCTKQNVTAFPAVKLYKEGESPVSYAGMLGTKDLLKFIQINRISCPVNIASIQEAEKYLHGELYKDLFSFTSVSVLGLFSPAMISAKEHFREAGKQLRGSVVTGVYSEDDVWILSNKYGAPLPAMLLARPREGRIESVPLASTSMQDMAQILANAPLEAFPEIMVENLPAYLRLQRPLLILFSDGSINPQYRNIVLALMRQKQLDSFTPCWLNLKNTPVGRGILKAYFGFLPPLPQLLLVNLHSGGQVYAFPSSQSITEQNLRLWLRKLGSGLENPITTLSAQEWKPPLPAFDFLSMMDAPMSQPPTKKVLECMKEKGVQESAEQPQGAPLTTRRGPAEVLRIKHWNKSNWPKEAEESSQHHKEL
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3849965..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3916222..3916382,3917540..3917730,3925869..3926134)
location: region:3849965-3926134:1
so has part: feature:3849965-3850127:1:exon
so has part: feature:3851583-3851665:1:exon
so has part: feature:3855728-3855801:1:exon
so has part: feature:3856495-3856569:1:exon
so has part: feature:3876443-3876564:1:exon
so has part: feature:3886365-3886455:1:exon
so has part: feature:3890048-3890198:1:exon
so has part: feature:3895028-3895194:1:exon
so has part: feature:3895890-3895950:1:exon
so has part: feature:3899341-3899464:1:exon
so has part: feature:3902026-3902169:1:exon
so has part: feature:3902690-3902749:1:exon
so has part: feature:3910690-3910858:1:exon
so has part: feature:3911144-3911280:1:exon
so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3916222-3916382:1:exon
so has part: feature:3917540-3917730:1:exon
so has part: feature:3925869-3926134:1:exon

XP_026639092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3849965-3850127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3851583-3851665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3855728-3855801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3856495-3856569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3876443-3876564:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3886365-3886455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3890048-3890198:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3895028-3895194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3895890-3895950:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3899341-3899464:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3902026-3902169:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3902690-3902749:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3910690-3910858:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3911144-3911280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3911931-3912015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3913743-3913881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3916222-3916382:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3917540-3917730:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3925869-3926134:1:exon

Txndc16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Txndc16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin domain-containing protein 16 isoform X1
translation: MMSSGIGVFRAGVALLVMCGFSKSAEDALPELSPEQYFSTLQPGKASLAYFCQVGSPSNSVFLEELKEAVRPLQDHGISVSKVNCVQEEASRYCGKEEGLMKAYLFRGSILLREFPTDTLFDVDAIVAHVLFALLFNEVKYVTILEDLHNIENSLKGKANMIFSYVEAIGTPEHRAVMEAAFVYGTSYQFALTTEVALLEDIGSEDIGRAHLYFCHCELALDLTERCRRTLMEQPLTTLNIHIFVKTMKAPLLMEVAEDPQQVSTIHLQLGLPLVFIISQQATYEADRRTAEWVAWRLLGKAGVLLLSRDSMDMNIPQHANVAFRRAEKEVPVEFLSLNDADLIVSHVKNNMHIEEIQEDEDGDEEGPDLAIQDDEVAETVYRDRKRRLPLELTVELTQETFNSTVMTSDSIVFFYATWHAVSMAFLQSYIDVAIKLKGTSTILLTRINCADWSDVCTKQNVTAFPAVKLYKEGESPVSYAGMLGTKDLLKFIQINRISCPVNIASIQEAEKYLHGELYKDLFSFTSVSVLGLFSPAMISAKEHFREAGKQLRGSVVTGVYSEDDVWILSNKYGAPLPAMLLARPREGRIESVPLASTSMQDMAQILANAPLEAFPEIMVENLPAYLRLQRPLLILFSDGSINPQYRNIVLALMRQKQLDSFTPCWLNLKNTPVGRGILKAYFGFLPPLPQLLLVNLHSGGQVYAFPSSQSITEQNLRLWLRKLGSGLENPITTLSAQEWKPPLPAFDFLSMMDAPMSQPPTKKVLECMKEKGVQESAEQPQGAPLTTRRGPAEVLRIKHWNKSNWPKEAEESSQHHKEL
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3849965..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3916222..3916382,3917540..3917730,3925869..3926134)
location: region:3849965-3926134:1
so has part: feature:3849965-3850127:1:exon
so has part: feature:3851583-3851665:1:exon
so has part: feature:3855728-3855801:1:exon
so has part: feature:3856495-3856569:1:exon
so has part: feature:3876443-3876564:1:exon
so has part: feature:3886365-3886455:1:exon
so has part: feature:3890048-3890198:1:exon
so has part: feature:3895028-3895194:1:exon
so has part: feature:3895890-3895950:1:exon
so has part: feature:3899341-3899464:1:exon
so has part: feature:3902026-3902169:1:exon
so has part: feature:3902690-3902749:1:exon
so has part: feature:3910690-3910858:1:exon
so has part: feature:3911144-3911280:1:exon
so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3916222-3916382:1:exon
so has part: feature:3917540-3917730:1:exon
so has part: feature:3925869-3926134:1:exon

XP_005355446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3849965-3850127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3851583-3851665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3855728-3855801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3856495-3856569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3876443-3876564:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3886365-3886455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3890048-3890198:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3895028-3895194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3895890-3895950:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3899341-3899464:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3902026-3902169:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3902690-3902749:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3910690-3910858:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3911144-3911280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3911931-3912015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3913743-3913881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3916222-3916382:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3917540-3917730:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3925869-3926134:1:exon

Txndc16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Txndc16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin domain-containing protein 16 isoform X2
translation: MMSSGIGVFRAGVALLVMCGFSKSAEDALPELSPEQYFSTLQPGKASLAYFCQVGSPSNSVFLEELKEAVRPLQDHGISVSKVNCVQEEASRYCGKEEGLMKAYLFRGSILLREFPTDTLFDVDAIVAHVLFALLFNEVKYVTILEDLHNIENSLKGKANMIFSYVEAIGTPEHRAVMEAAFVYGTSYQFALTTEVALLEDIGSEDIGRAHLYFCHCELALDLTERCRRTLMEQPLTTLNIHIFVKTMKAPLLMEVAEDPQQVSTIHLQLGLPLVFIISQQATYEADRRTAEWVAWRLLGKAGVLLLSRDSMDMNIPQHANVAFRRAEKEVPVEFLSLNDADLIVSHVKNNMHIEEIQEDEDGDEEGPDLAIQDDEVAETVYRDRKRRLPLELTVELTQETFNSTVMTSDSIVFFYATWHAVSMAFLQSYIDVAIKLKGTSTILLTRINCADWSDVCTKQNVTAFPAVKLYKEGESPVSYAGMLGTKDLLKFIQINRISCPVNIASIQEAEKYLHGELYKDLFSFTSVSVLGLFSPAMISAKEHFREAGKQLRGSVVTGVYSEDDVWILSNKYGAPLPAMLLARPREGRIESVPLASTSMQDMAQILANAPLEAFKEYSSGEGNLEGIFWLSAPTSSAAFGESAFRRPSVCISFISVYNGTKPEIVA
SIO_010081: Txndc16
subclass of: SO_0000673
so part of: Txndc16
location: join(3849965..3850127,3851583..3851665,3855728..3855801,3856495..3856569,3876443..3876564,3886365..3886455,3890048..3890198,3895028..3895194,3895890..3895950,3899341..3899464,3902026..3902169,3902690..3902749,3910690..3910858,3911144..3911280,3911931..3912015,3913743..3913881,3917540..3917698)
location: region:3849965-3917698:1
so has part: feature:3849965-3850127:1:exon
so has part: feature:3851583-3851665:1:exon
so has part: feature:3855728-3855801:1:exon
so has part: feature:3856495-3856569:1:exon
so has part: feature:3876443-3876564:1:exon
so has part: feature:3886365-3886455:1:exon
so has part: feature:3890048-3890198:1:exon
so has part: feature:3895028-3895194:1:exon
so has part: feature:3895890-3895950:1:exon
so has part: feature:3899341-3899464:1:exon
so has part: feature:3902026-3902169:1:exon
so has part: feature:3902690-3902749:1:exon
so has part: feature:3910690-3910858:1:exon
so has part: feature:3911144-3911280:1:exon
so has part: feature:3911931-3912015:1:exon
so has part: feature:3913743-3913881:1:exon
so has part: feature:3917540-3917698:1:exon

XP_026639093.1
type: Protein
SIO_000068: ncbiprotein

position:3917698:1
position: 3917698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849965-3850127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3851583-3851665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3855728-3855801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3856495-3856569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3876443-3876564:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3886365-3886455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3890048-3890198:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3895028-3895194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3895890-3895950:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3899341-3899464:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3902026-3902169:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3902690-3902749:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3910690-3910858:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3911144-3911280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3911931-3912015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3913743-3913881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3917540-3917698:1:exon

LOC101995447
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101995447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3957373..3969964
location: region:3957373-3969964:1
so has part: feature:3957373-3969964:1:exon

101995447
type: Gene
SIO_000068: ncbigene

position:3957373:1
position: 3957373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3969964:1
position: 3969964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3957373-3969964:1:exon

LOC101995447
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101995447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101995447
subclass of: SO_0000673
so part of: LOC101995447
location: 3957373..3957456
location: region:3957373-3957456:1
so has part: feature:3957373-3957456:1:exon

position:3957456:1
position: 3957456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3957373-3957456:1:exon

LOC101995447
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101995447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101995447
subclass of: SO_0000673
so part of: LOC101995447
location: 3968937..3969964
location: region:3968937-3969964:1
so has part: feature:3968937-3969964:1:exon

position:3968937:1
position: 3968937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968937-3969964:1:exon

Ptger2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ptger2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4030113..4039184)
location: region:4030113-4039184:-1
so has part: feature:4030113-4039184:-1:exon
subclass of: SO_0000010

101994007
type: Gene
SIO_000068: ncbigene

position:4030113:-1
position: 4030113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4039184:-1
position: 4039184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4030113-4039184:-1:exon

Ptger2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ptger2
product: prostaglandin E receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005355390.3
SIO_010081: Ptger2
subclass of: SO_0000673
so part of: Ptger2
location: complement(join(4030113..4030689,4038342..4039184))
location: region:4030113-4039184:-1
so has part: feature:4038342-4039184:-1:exon
so has part: feature:4030113-4030689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4038342-4039184:-1:exon

position:4038342:-1
position: 4038342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4030113-4030689:-1:exon

position:4030689:-1
position: 4030689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ptger2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ptger2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E2 receptor EP2 subtype
translation: MDNASHDSGQTEDCQSRQWLLPEDSPAISSVMFSAGVLGNLIALALLARRWRGDTGCSAGSRTSISLFHVLVTELVLTDLLGTCLISPVVLASYARNQTLVALAPESRVCTYFAFTMTFFSLATMLMLFAMALERYLSIGHPYFYRRRFSRRGGLAVLPVIYAVSLLFCSLPLLNYGEYVQYCPGTWCFIRHGRTAYLQLYATVLLLLILAVLSCNFSVILNLIRMHRRARRSRCGSFGGGLGGPGSRRRGERTSMAEETDHLILLAIMTITFAICSLPFTIFAYVNETSSRKENLDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRTSLRTQEVSRTSCPTLSSATKQTDLCGQL
SIO_010081: Ptger2
subclass of: SO_0000673
so part of: Ptger2
location: complement(join(4030444..4030689,4038342..4039184))
location: region:4030444-4039184:-1
so has part: feature:4038342-4039184:-1:exon
so has part: feature:4030444-4030689:-1:exon

XP_005355447.1
type: Protein
SIO_000068: ncbiprotein

position:4030444:-1
position: 4030444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4038342-4039184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4030444-4030689:-1:exon

Ptgdr
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Ptgdr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4066993..4075906)
location: region:4066993-4075906:-1
so has part: feature:4066993-4075906:-1:exon
subclass of: SO_0000010

101994285
type: Gene
SIO_000068: ncbigene

position:4066993:-1
position: 4066993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4075906:-1
position: 4075906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4066993-4075906:-1:exon

Ptgdr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Ptgdr
product: prostaglandin D2 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005355391.2
SIO_010081: Ptgdr
subclass of: SO_0000673
so part of: Ptgdr
location: complement(join(4066993..4067720,4068453..4068702,4074774..4075906))
location: region:4066993-4075906:-1
so has part: feature:4074774-4075906:-1:exon
so has part: feature:4068453-4068702:-1:exon
so has part: feature:4066993-4067720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4074774-4075906:-1:exon

position:4074774:-1
position: 4074774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4068453-4068702:-1:exon

position:4068453:-1
position: 4068453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4068702:-1
position: 4068702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4066993-4067720:-1:exon

position:4067720:-1
position: 4067720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ptgdr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Ptgdr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin D2 receptor
translation: MNVSYRCHASPWVENGSSATMGSMLFGAGLLGNLLALVLLARSGLGSCGPRPLRPPPSVFYVLVCGLTVTDLLGKCLVSPVVLAAYAQNRSLQELLPTAGNQLCQAFAFVMSFFGLASTLQLLAMALECWLSLGHPFFYQRHITLRRGVLVAPIVGAFCLAFCALPFAGFGKFVQYCPGTWCFIQMVHEKRSLSVLGFSVLYSSLMALLVLATVLCNLGAMHNLYTMHRRLKRHPRCCLRDRTQPGSSQGLGSLHPLEELDHLLLLALMTVLFTMCSLPLIYRAYYGAFKLVHTTEGDSEDLRALRFLSVISIVDPWIFIIFRTSVFRMLFHKIFVRPLSYRNWHSHSCQKSKMESSL
SIO_010081: Ptgdr
subclass of: SO_0000673
so part of: Ptgdr
location: complement(join(4068469..4068702,4074774..4075616))
location: region:4068469-4075616:-1
so has part: feature:4074774-4075616:-1:exon
so has part: feature:4068469-4068702:-1:exon

XP_005355448.1
type: Protein
SIO_000068: ncbiprotein

position:4068469:-1
position: 4068469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4075616:-1
position: 4075616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4074774-4075616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4068469-4068702:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 79684
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4122900..4122999
location: region:4122900-4122999:1
so has part: feature:4122900-4122999:1:region

position:4122900:1
position: 4122900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4122999:1
position: 4122999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4122900-4122999:1:region

Arl11
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Arl11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4152638..4154764)
location: region:4152638-4154764:-1
so has part: feature:4152638-4154764:-1:exon
subclass of: SO_0000010

101987230
type: Gene
SIO_000068: ncbigene

position:4152638:-1
position: 4152638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4154764:-1
position: 4154764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4152638-4154764:-1:exon

Arl11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Arl11
product: ADP ribosylation factor like GTPase 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005355447.2
SIO_010081: Arl11
subclass of: SO_0000673
so part of: Arl11
location: complement(join(4152638..4153768,4154376..4154764))
location: region:4152638-4154764:-1
so has part: feature:4154376-4154764:-1:exon
so has part: feature:4152638-4153768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4154376-4154764:-1:exon

position:4154376:-1
position: 4154376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4152638-4153768:-1:exon

position:4153768:-1
position: 4153768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Arl11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Arl11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 11
translation: MGSVNSRGHKAEAQVVMMGLDSAGKTMILYKLKGNPLVETSPTVGFNVEPLESPGRVSLILWDVGGQPQLRATWKDYLEGIDILVYVLDSTDEARLPEAVAELQEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLGLERFQDRCWELRACSALTGQGLQEALQSLRHLLRSC
SIO_010081: Arl11
subclass of: SO_0000673
so part of: Arl11
location: complement(4153134..4153664)
location: region:4153134-4153664:-1
so has part: feature:4153134-4153664:-1:exon

XP_005355504.1
type: Protein
SIO_000068: ncbiprotein

position:4153134:-1
position: 4153134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4153664:-1
position: 4153664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4153134-4153664:-1:exon

Sgcg
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sgcg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4186527..4216909
location: region:4186527-4216909:1
so has part: feature:4186527-4216909:1:exon
subclass of: SO_0000010

101995953
type: Gene
SIO_000068: ncbigene

position:4186527:1
position: 4186527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4216909:1
position: 4216909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4186527-4216909:1:exon

Sgcg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sgcg
product: sarcoglycan gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013349225.2
SIO_010081: Sgcg
subclass of: SO_0000673
so part of: Sgcg
location: join(4186527..4186647,4191995..4192192,4198891..4198992,4200148..4200235,4203319..4203438,4206086..4206158,4211966..4212089,4215144..4216909)
location: region:4186527-4216909:1
so has part: feature:4186527-4186647:1:exon
so has part: feature:4191995-4192192:1:exon
so has part: feature:4198891-4198992:1:exon
so has part: feature:4200148-4200235:1:exon
so has part: feature:4203319-4203438:1:exon
so has part: feature:4206086-4206158:1:exon
so has part: feature:4211966-4212089:1:exon
so has part: feature:4215144-4216909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4186527-4186647:1:exon

position:4186647:1
position: 4186647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4191995-4192192:1:exon

position:4191995:1
position: 4191995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4192192:1
position: 4192192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4198891-4198992:1:exon

position:4198891:1
position: 4198891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4198992:1
position: 4198992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4200148-4200235:1:exon

position:4200148:1
position: 4200148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4200235:1
position: 4200235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4203319-4203438:1:exon

position:4203319:1
position: 4203319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4203438:1
position: 4203438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4206086-4206158:1:exon

position:4206086:1
position: 4206086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4206158:1
position: 4206158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4211966-4212089:1:exon

position:4211966:1
position: 4211966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4212089:1
position: 4212089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4215144-4216909:1:exon

position:4215144:1
position: 4215144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sgcg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sgcg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan
translation: MVREQYTTVTEGTHIERPENQHVYKIGIYGWRKRCLYLFVLLLLALLVVNLALTVWILKVMWFSPIGMGYLHVKQDGLRLEGESEFLFPLYVKEIRSRVDSSLLLQSTQNVTVSARNPEGEVTGRVKVGAQMVDVQSQGFQILSEDGKPLFTAEEQDVMVGTGRLRVTGPEGALFEHSVETPLVRADPFEDIWLESPTRSLSMDAPRGVHIKAHTGKMEALSQMDIILRSSDGALVLDAETVGLPMLKQGTPGPSGSSKEFYEICVCPDGKLYLSTAGEVTTCEEHSHICL
SIO_010081: Sgcg
subclass of: SO_0000673
so part of: Sgcg
location: join(4191998..4192192,4198891..4198992,4200148..4200235,4203319..4203438,4206086..4206158,4211966..4212089,4215144..4215317)
location: region:4191998-4215317:1
so has part: feature:4191998-4192192:1:exon
so has part: feature:4198891-4198992:1:exon
so has part: feature:4200148-4200235:1:exon
so has part: feature:4203319-4203438:1:exon
so has part: feature:4206086-4206158:1:exon
so has part: feature:4211966-4212089:1:exon
so has part: feature:4215144-4215317:1:exon

XP_013204679.1
type: Protein
SIO_000068: ncbiprotein

position:4191998:1
position: 4191998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215317:1
position: 4215317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4191998-4192192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4198891-4198992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4200148-4200235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203319-4203438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4206086-4206158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4211966-4212089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4215144-4215317:1:exon

Sacs
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Sacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4223559..4307048)
location: region:4223559-4307048:-1
so has part: feature:4223559-4307048:-1:exon
subclass of: SO_0000010

101996419
type: Gene
SIO_000068: ncbigene

position:4223559:-1
position: 4223559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307048:-1
position: 4307048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4223559-4307048:-1:exon

Sacs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sacs
product: sacsin molecular chaperone, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_026783229.1
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4223559..4236359,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4298368..4298829,4306781..4307048))
location: region:4223559-4307048:-1
so has part: feature:4306781-4307048:-1:exon
so has part: feature:4298368-4298829:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4223559-4236359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4306781-4307048:-1:exon

position:4306781:-1
position: 4306781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4298368-4298829:-1:exon

position:4298368:-1
position: 4298368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4298829:-1
position: 4298829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4266833-4266983:-1:exon

position:4266833:-1
position: 4266833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266983:-1
position: 4266983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4261805-4261892:-1:exon

position:4261805:-1
position: 4261805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261892:-1
position: 4261892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4257865-4257950:-1:exon

position:4257865:-1
position: 4257865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4257950:-1
position: 4257950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4256108-4256219:-1:exon

position:4256108:-1
position: 4256108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4256219:-1
position: 4256219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4247930-4248076:-1:exon

position:4247930:-1
position: 4247930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4248076:-1
position: 4248076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4245085-4246582:-1:exon

position:4245085:-1
position: 4245085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4246582:-1
position: 4246582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4244238-4244329:-1:exon

position:4244238:-1
position: 4244238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4244329:-1
position: 4244329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4223559-4236359:-1:exon

position:4236359:-1
position: 4236359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sacs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sacs
product: sacsin molecular chaperone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_013349226.2
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4223559..4236359,4240434..4240460,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4298368..4298829,4306781..4307048))
location: region:4223559-4307048:-1
so has part: feature:4306781-4307048:-1:exon
so has part: feature:4298368-4298829:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4240434-4240460:-1:exon
so has part: feature:4223559-4236359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4306781-4307048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4298368-4298829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266833-4266983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4261805-4261892:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4257865-4257950:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4256108-4256219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4247930-4248076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4245085-4246582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4244238-4244329:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4240434-4240460:-1:exon

position:4240434:-1
position: 4240434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4240460:-1
position: 4240460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4223559-4236359:-1:exon

Sacs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sacs
product: sacsin molecular chaperone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026783228.1
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4223559..4236359,4240434..4240460,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4267062..4267392))
location: region:4223559-4267392:-1
so has part: feature:4267062-4267392:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4240434-4240460:-1:exon
so has part: feature:4223559-4236359:-1:exon

position:4267392:-1
position: 4267392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4267062-4267392:-1:exon

position:4267062:-1
position: 4267062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4266833-4266983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4261805-4261892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4257865-4257950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4256108-4256219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4247930-4248076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245085-4246582:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4244238-4244329:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4240434-4240460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4223559-4236359:-1:exon

Sacs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X3
translation: METQERRWVRVTVLRGCVGCRTVAVPATATARDLKERIFAETGFPVAEQRLWRGDRELPDWIKIGDLTPKSCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTDTLWSKDMAQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEMNELPDQFAPFIGVFGSTKETFANGSFPGTFFRFPLRLQPSQLSSNLYTKQKVLELFDSFRADADTVLLFLKSVQSVSLHVREADGTEKLVFRVTASENKTLKHERPNSIKILGTAISNYCKKIPSNSITCVTYHINIVLEDESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGLAMPLSGRDDEENGAISDFSGKAFCFLPLPPGEESRTGLPVHVSGFFGLTDNRRSIKWRELDQWRDPAALWNEFLIVNVVPKAYATLILDSVKRLETEKSSDFPLSVDAIYKLWPEASKVKAHWQPVLGPLFSELFQHAVIYSISGEWVKLEQVYFSELDGSLEYTQSVLNYLQSSGKQIAKVPGNLAAAVQLSAGSATSTVTPVRKVTPTWVRQVLRKCAHLGSTEEKLHLLEFVLSDHTYSELLGLELLPLQSGAFVPFSSSVSDQDVVYITSEEFPRSLFPGLEARLILENLKPHLLAALKEAAQTRGRPCTQLQLLNPERFARLVKEVMNTFWPGRELVVQWYPFSEDKHHPSISWLKMVWKNLYIHFAEDLTLFDEMPLIPRTTLDEDQTCVELIRLRIPSVVILDDETGAQLPEFLADIVQKLGGIVLKRLDTSIQHPLVKKYIHSPLPSAILQIMEKIPLQKLCNQVASLLPTHKDALRKFLASLTDTSEKEKRIIQELTIFKRINHSSDQGISSYTKLKGCKVLDHTAKLPADLRLSLSVIDSSDEATIHLANMLKIEKLKTTSCLKFVLKDIENAFYTQEEVTHLMLWILENLSSLKNENPNVLDWLMPLKFIHMPQERMVAASELFDPDIEVLKDLFYHEEEACFPPAIFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVSSCQNQDVLLKKAKTLLLVLNKNHTLLQSSEGKMTLKKIKWVPAYKERPPNYPGSLVWRGDLCNLCAPPDMCDAAHAVLVGSSLPLVESVHVNLEKALGIFTKPSISAVLKHFKIVVDWYTSKTFSDEDYYQFQHILLEIYGFMHDHLNEGKDSFKALKFPWVWTGKNFCPLVQAVIKPIHDLDLQPYLYNVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYLASDQELSEQESKQNLHLMLNIMRWLYSNQIPASPNTPVPIYHSKNPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFINITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLAVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVNSMYLKYLKIEETNPTLAQDTIIIKKKACSSKALSAPALSVLKEAAKLMKTCSSSNKKLPTDVPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPATLFEMAKSGQSKKPSDELPQKTVDCTTWLICTCMDTGEALKFSLNESGKRLGLVPCGAVGVLLHETQEQKWSVKPHIGEVFCYLPLRIKTGLPIHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVIVKAYLQALSVLRDLATGGELIDYTYYTVWPDPDLVHDDFSVICQGFYEDIAHGKGKELTRVFSDGSTWVSMKNVRFLDDS…
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4224802..4236359,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4298368..4298387))
location: region:4224802-4298387:-1
so has part: feature:4298368-4298387:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4224802-4236359:-1:exon

XP_026639030.1
type: Protein
SIO_000068: ncbiprotein

position:4224802:-1
position: 4224802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4298387:-1
position: 4298387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4298368-4298387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266833-4266983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4261805-4261892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4257865-4257950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4256108-4256219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4247930-4248076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245085-4246582:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4244238-4244329:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4224802-4236359:-1:exon

Sacs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X1
translation: METQERRWVRVTVLRGCVGCRTVAVPATATARDLKERIFAETGFPVAEQRLWRGDRELPDWIKIGDLTPKSCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTDTLWSKDMAQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEMNELPDQFAPFIGVFGSTKETFANGSFPGTFFRFPLRLQPSQLSSNLYTKQKVLELFDSFRADADTVLLFLKSVQSVSLHVREADGTEKLVFRVTASENKTLKHERPNSIKILGTAISNYCKKIPSNSITCVTYHINIVLEDESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGLAMPLSGRDDEENGAISDFSGKAFCFLPLPPGEESRTGLPVHVSGFFGLTDNRRSIKWRELDQWRDPAALWNEFLIVNVVPKAYATLILDSVKRLETEKSSDFPLSVDAIYKLWPEASKVKAHWQPVLGPLFSELFQHAVIYSISGEWVKLEQVYFSELDGSLEYTQSVLNYLQSSGKQIAKVPGNLAAAVQLSAGSATSTVTPVRKVTPTWVRQVLRKCAHLGSTEEKLHLLEFVLSDHTYSELLGLELLPLQSGAFVPFSSSVSDQDVVYITSEEFPRSLFPGLEARLILENLKPHLLAALKEAAQTRAQQLLWGYSGRPCTQLQLLNPERFARLVKEVMNTFWPGRELVVQWYPFSEDKHHPSISWLKMVWKNLYIHFAEDLTLFDEMPLIPRTTLDEDQTCVELIRLRIPSVVILDDETGAQLPEFLADIVQKLGGIVLKRLDTSIQHPLVKKYIHSPLPSAILQIMEKIPLQKLCNQVASLLPTHKDALRKFLASLTDTSEKEKRIIQELTIFKRINHSSDQGISSYTKLKGCKVLDHTAKLPADLRLSLSVIDSSDEATIHLANMLKIEKLKTTSCLKFVLKDIENAFYTQEEVTHLMLWILENLSSLKNENPNVLDWLMPLKFIHMPQERMVAASELFDPDIEVLKDLFYHEEEACFPPAIFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVSSCQNQDVLLKKAKTLLLVLNKNHTLLQSSEGKMTLKKIKWVPAYKERPPNYPGSLVWRGDLCNLCAPPDMCDAAHAVLVGSSLPLVESVHVNLEKALGIFTKPSISAVLKHFKIVVDWYTSKTFSDEDYYQFQHILLEIYGFMHDHLNEGKDSFKALKFPWVWTGKNFCPLVQAVIKPIHDLDLQPYLYNVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYLASDQELSEQESKQNLHLMLNIMRWLYSNQIPASPNTPVPIYHSKNPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFINITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLAVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVNSMYLKYLKIEETNPTLAQDTIIIKKKACSSKALSAPALSVLKEAAKLMKTCSSSNKKLPTDVPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPATLFEMAKSGQSKKPSDELPQKTVDCTTWLICTCMDTGEALKFSLNESGKRLGLVPCGAVGVLLHETQEQKWSVKPHIGEVFCYLPLRIKTGLPIHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVIVKAYLQALSVLRDLATGGELIDYTYYTVWPDPDLVHDDFSVICQGFYEDIAHGKGKELTRVFSDGSTWVSM…
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4224802..4236359,4240434..4240460,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4298368..4298387))
location: region:4224802-4298387:-1
so has part: feature:4298368-4298387:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4240434-4240460:-1:exon
so has part: feature:4224802-4236359:-1:exon

XP_013204680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4298368-4298387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266833-4266983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4261805-4261892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4257865-4257950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4256108-4256219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4247930-4248076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245085-4246582:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4244238-4244329:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4240434-4240460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4224802-4236359:-1:exon

Sacs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X2
translation: MGDRWVRVTVLRGCVGCRTVAVPATATARDLKERIFAETGFPVAEQRLWRGDRELPDWIKIGDLTPKSCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTDTLWSKDMAQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEMNELPDQFAPFIGVFGSTKETFANGSFPGTFFRFPLRLQPSQLSSNLYTKQKVLELFDSFRADADTVLLFLKSVQSVSLHVREADGTEKLVFRVTASENKTLKHERPNSIKILGTAISNYCKKIPSNSITCVTYHINIVLEDESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGLAMPLSGRDDEENGAISDFSGKAFCFLPLPPGEESRTGLPVHVSGFFGLTDNRRSIKWRELDQWRDPAALWNEFLIVNVVPKAYATLILDSVKRLETEKSSDFPLSVDAIYKLWPEASKVKAHWQPVLGPLFSELFQHAVIYSISGEWVKLEQVYFSELDGSLEYTQSVLNYLQSSGKQIAKVPGNLAAAVQLSAGSATSTVTPVRKVTPTWVRQVLRKCAHLGSTEEKLHLLEFVLSDHTYSELLGLELLPLQSGAFVPFSSSVSDQDVVYITSEEFPRSLFPGLEARLILENLKPHLLAALKEAAQTRAQQLLWGYSGRPCTQLQLLNPERFARLVKEVMNTFWPGRELVVQWYPFSEDKHHPSISWLKMVWKNLYIHFAEDLTLFDEMPLIPRTTLDEDQTCVELIRLRIPSVVILDDETGAQLPEFLADIVQKLGGIVLKRLDTSIQHPLVKKYIHSPLPSAILQIMEKIPLQKLCNQVASLLPTHKDALRKFLASLTDTSEKEKRIIQELTIFKRINHSSDQGISSYTKLKGCKVLDHTAKLPADLRLSLSVIDSSDEATIHLANMLKIEKLKTTSCLKFVLKDIENAFYTQEEVTHLMLWILENLSSLKNENPNVLDWLMPLKFIHMPQERMVAASELFDPDIEVLKDLFYHEEEACFPPAIFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVSSCQNQDVLLKKAKTLLLVLNKNHTLLQSSEGKMTLKKIKWVPAYKERPPNYPGSLVWRGDLCNLCAPPDMCDAAHAVLVGSSLPLVESVHVNLEKALGIFTKPSISAVLKHFKIVVDWYTSKTFSDEDYYQFQHILLEIYGFMHDHLNEGKDSFKALKFPWVWTGKNFCPLVQAVIKPIHDLDLQPYLYNVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYLASDQELSEQESKQNLHLMLNIMRWLYSNQIPASPNTPVPIYHSKNPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFINITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLAVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVNSMYLKYLKIEETNPTLAQDTIIIKKKACSSKALSAPALSVLKEAAKLMKTCSSSNKKLPTDVPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPATLFEMAKSGQSKKPSDELPQKTVDCTTWLICTCMDTGEALKFSLNESGKRLGLVPCGAVGVLLHETQEQKWSVKPHIGEVFCYLPLRIKTGLPIHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVIVKAYLQALSVLRDLATGGELIDYTYYTVWPDPDLVHDDFSVICQGFYEDIAHGKGKELTRVFSDGSTWVSMKNV…
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4224802..4236359,4240434..4240460,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4267062..4267072))
location: region:4224802-4267072:-1
so has part: feature:4267062-4267072:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4240434-4240460:-1:exon
so has part: feature:4224802-4236359:-1:exon

XP_026639029.1
type: Protein
SIO_000068: ncbiprotein

position:4267072:-1
position: 4267072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4267062-4267072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266833-4266983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4261805-4261892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4257865-4257950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4256108-4256219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4247930-4248076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245085-4246582:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4244238-4244329:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4240434-4240460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4224802-4236359:-1:exon

Sacs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Sacs
product: sacsin molecular chaperone, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026783230.1
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4235991..4236359,4240434..4240455,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4298368..4298829,4306781..4307048))
location: region:4235991-4307048:-1
so has part: feature:4306781-4307048:-1:exon
so has part: feature:4298368-4298829:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4240434-4240455:-1:exon
so has part: feature:4235991-4236359:-1:exon

position:4235991:-1
position: 4235991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4306781-4307048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4298368-4298829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266833-4266983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4261805-4261892:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4257865-4257950:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4256108-4256219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4247930-4248076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4245085-4246582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4244238-4244329:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4240434-4240455:-1:exon

position:4240455:-1
position: 4240455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4235991-4236359:-1:exon

Sacs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Sacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X4
translation: METQERRWVRVTVLRGCVGCRTVAVPATATARDLKERIFAETGFPVAEQRLWRGDRELPDWIKIGDLTPKSCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTDTLWSKDMAQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEMNELPDQFAPFIGVFGSTKETFANGSFPGTFFRFPLRLQPSQLSSNLYTKQKVLELFDSFRADADTVLLFLKSVQSVSLHVREADGTEKLVFRVTASENKTLKHERPNSIKILGTAISNYCKKIPSNSITCVTYHINIVLEDESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGLAMPLSGRDDEENGAISDFSGKAFCFLPLPPGEESRTGLPVHVSGFFGLTDNRRSIKWRELDQWRDPAALWNEFLIVNVVPKAYATLILDSVKRLETEKSSDFPLSVDAIYKLWPEASKVKAHWQPVLGPLFSELFQHAVIYSISGEWVKLEQVYFSELDGSLEYTQSVLNYLQSSGKQIAKVPGNLAAAVQLSAGSATSTVTPVRKVTPTWVRQVLRKCAHLGSTEEKLHLLEFVLSDHTYSELLGLELLPLQSGAFVPFSSSVSDQDVVYITSEEFPRSLFPGLEARLILENLKPHLLAALKEAAQTRAASLGILRKTVYSAAASKSRTICTSC
SIO_010081: Sacs
subclass of: SO_0000673
so part of: Sacs
location: complement(join(4236302..4236359,4240434..4240455,4244238..4244329,4245085..4246582,4247930..4248076,4256108..4256219,4257865..4257950,4261805..4261892,4266833..4266983,4298368..4298387))
location: region:4236302-4298387:-1
so has part: feature:4298368-4298387:-1:exon
so has part: feature:4266833-4266983:-1:exon
so has part: feature:4261805-4261892:-1:exon
so has part: feature:4257865-4257950:-1:exon
so has part: feature:4256108-4256219:-1:exon
so has part: feature:4247930-4248076:-1:exon
so has part: feature:4245085-4246582:-1:exon
so has part: feature:4244238-4244329:-1:exon
so has part: feature:4240434-4240455:-1:exon
so has part: feature:4236302-4236359:-1:exon

XP_026639031.1
type: Protein
SIO_000068: ncbiprotein

position:4236302:-1
position: 4236302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4298368-4298387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266833-4266983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4261805-4261892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4257865-4257950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4256108-4256219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4247930-4248076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245085-4246582:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4244238-4244329:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4240434-4240455:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4236302-4236359:-1:exon

Tnfrsf19
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Tnfrsf19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4386259..4474863
location: region:4386259-4474863:1
so has part: feature:4386259-4474863:1:exon
subclass of: SO_0000010

101997070
type: Gene
SIO_000068: ncbigene

position:4386259:1
position: 4386259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4474863:1
position: 4474863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4386259-4474863:1:exon

Tnfrsf19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnfrsf19
product: TNF receptor superfamily member 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005355399.2
SIO_010081: Tnfrsf19
subclass of: SO_0000673
so part of: Tnfrsf19
location: join(4386259..4386674,4404434..4404526,4407763..4407873,4428362..4428540,4435646..4435731,4464997..4465161,4466155..4466280,4467771..4467873,4469006..4469387,4472247..4474863)
location: region:4386259-4474863:1
so has part: feature:4386259-4386674:1:exon
so has part: feature:4404434-4404526:1:exon
so has part: feature:4407763-4407873:1:exon
so has part: feature:4428362-4428540:1:exon
so has part: feature:4435646-4435731:1:exon
so has part: feature:4464997-4465161:1:exon
so has part: feature:4466155-4466280:1:exon
so has part: feature:4467771-4467873:1:exon
so has part: feature:4469006-4469387:1:exon
so has part: feature:4472247-4474863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4386259-4386674:1:exon

position:4386674:1
position: 4386674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4404434-4404526:1:exon

position:4404434:1
position: 4404434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4404526:1
position: 4404526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4407763-4407873:1:exon

position:4407763:1
position: 4407763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4407873:1
position: 4407873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4428362-4428540:1:exon

position:4428362:1
position: 4428362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4428540:1
position: 4428540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4435646-4435731:1:exon

position:4435646:1
position: 4435646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4435731:1
position: 4435731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4464997-4465161:1:exon

position:4464997:1
position: 4464997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4465161:1
position: 4465161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4466155-4466280:1:exon

position:4466155:1
position: 4466155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4466280:1
position: 4466280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4467771-4467873:1:exon

position:4467771:1
position: 4467771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4467873:1
position: 4467873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4469006-4469387:1:exon

position:4469006:1
position: 4469006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4469387:1
position: 4469387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4472247-4474863:1:exon

position:4472247:1
position: 4472247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tnfrsf19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnfrsf19
product: TNF receptor superfamily member 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_013349238.2
SIO_010081: Tnfrsf19
subclass of: SO_0000673
so part of: Tnfrsf19
location: join(4386263..4386442,4404434..4404526,4407763..4407873,4428362..4428540,4435646..4435731,4464997..4465161,4466155..4466280,4467771..4467873,4469006..4469387,4472247..4474863)
location: region:4386263-4474863:1
so has part: feature:4386263-4386442:1:exon
so has part: feature:4404434-4404526:1:exon
so has part: feature:4407763-4407873:1:exon
so has part: feature:4428362-4428540:1:exon
so has part: feature:4435646-4435731:1:exon
so has part: feature:4464997-4465161:1:exon
so has part: feature:4466155-4466280:1:exon
so has part: feature:4467771-4467873:1:exon
so has part: feature:4469006-4469387:1:exon
so has part: feature:4472247-4474863:1:exon

position:4386263:1
position: 4386263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4386263-4386442:1:exon

position:4386442:1
position: 4386442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4404434-4404526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4407763-4407873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4428362-4428540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4435646-4435731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4464997-4465161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4466155-4466280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4467771-4467873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4469006-4469387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4472247-4474863:1:exon

Tnfrsf19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Tnfrsf19
product: TNF receptor superfamily member 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_013349239.2
SIO_010081: Tnfrsf19
subclass of: SO_0000673
so part of: Tnfrsf19
location: join(4395658..4395766,4404434..4404526,4407763..4407873,4428362..4428540,4435646..4435731,4464997..4465161,4466155..4466280,4467771..4467873,4469006..4469387,4472247..4474863)
location: region:4395658-4474863:1
so has part: feature:4395658-4395766:1:exon
so has part: feature:4404434-4404526:1:exon
so has part: feature:4407763-4407873:1:exon
so has part: feature:4428362-4428540:1:exon
so has part: feature:4435646-4435731:1:exon
so has part: feature:4464997-4465161:1:exon
so has part: feature:4466155-4466280:1:exon
so has part: feature:4467771-4467873:1:exon
so has part: feature:4469006-4469387:1:exon
so has part: feature:4472247-4474863:1:exon

position:4395658:1
position: 4395658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4395658-4395766:1:exon

position:4395766:1
position: 4395766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4404434-4404526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4407763-4407873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4428362-4428540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4435646-4435731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4464997-4465161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4466155-4466280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4467771-4467873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4469006-4469387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4472247-4474863:1:exon

Tnfrsf19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnfrsf19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MRAMASRVLLEQGRVLLVTMLVLGCLLCKAMCETGDCRQQEFKDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVPCRPHRFKEDWGFQKCKPCVDCALVNRFQRANCTHTSDAVCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVKISSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDIQYNGSELSCFDQPRLRHCAHRACCQCHRDSAQTYGPVHLIPSLCCEEARSSARAALGCGLHSTATLQERNTASVADAMPAFFGSVSRSMCGEFSDGWPLMRNPLGDGSLCDSYPELTGEDINSLHPENESSTSLDSSGGQDLAGTAAADSSGNFTETTDSPRVREQTLARDVQRTPSQGSWEGSGNLNLGTPTPFQDA
SIO_010081: Tnfrsf19
subclass of: SO_0000673
so part of: Tnfrsf19
location: join(4404449..4404526,4407763..4407873,4428362..4428540,4435646..4435731,4464997..4465161,4466155..4466280,4467771..4467873,4469006..4469387,4472247..4472255)
location: region:4404449-4472255:1
so has part: feature:4404449-4404526:1:exon
so has part: feature:4407763-4407873:1:exon
so has part: feature:4428362-4428540:1:exon
so has part: feature:4435646-4435731:1:exon
so has part: feature:4464997-4465161:1:exon
so has part: feature:4466155-4466280:1:exon
so has part: feature:4467771-4467873:1:exon
so has part: feature:4469006-4469387:1:exon
so has part: feature:4472247-4472255:1:exon

XP_005355456.1
type: Protein
SIO_000068: ncbiprotein

position:4404449:1
position: 4404449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4472255:1
position: 4472255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4404449-4404526:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4407763-4407873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4428362-4428540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4435646-4435731:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4464997-4465161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4466155-4466280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4467771-4467873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4469006-4469387:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4472247-4472255:1:exon

Tnfrsf19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnfrsf19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MRAMASRVLLEQGRVLLVTMLVLGCLLCKAMCETGDCRQQEFKDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVPCRPHRFKEDWGFQKCKPCVDCALVNRFQRANCTHTSDAVCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVKISSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDIQYNGSELSCFDQPRLRHCAHRACCQCHRDSAQTYGPVHLIPSLCCEEARSSARAALGCGLHSTATLQERNTASVADAMPAFFGSVSRSMCGEFSDGWPLMRNPLGDGSLCDSYPELTGEDINSLHPENESSTSLDSSGGQDLAGTAAADSSGNFTETTDSPRVREQTLARDVQRTPSQGSWEGSGNLNLGTPTPFQDA
SIO_010081: Tnfrsf19
subclass of: SO_0000673
so part of: Tnfrsf19
location: join(4404449..4404526,4407763..4407873,4428362..4428540,4435646..4435731,4464997..4465161,4466155..4466280,4467771..4467873,4469006..4469387,4472247..4472255)
location: region:4404449-4472255:1
so has part: feature:4404449-4404526:1:exon
so has part: feature:4407763-4407873:1:exon
so has part: feature:4428362-4428540:1:exon
so has part: feature:4435646-4435731:1:exon
so has part: feature:4464997-4465161:1:exon
so has part: feature:4466155-4466280:1:exon
so has part: feature:4467771-4467873:1:exon
so has part: feature:4469006-4469387:1:exon
so has part: feature:4472247-4472255:1:exon

XP_013204692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4404449-4404526:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4407763-4407873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4428362-4428540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4435646-4435731:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4464997-4465161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4466155-4466280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4467771-4467873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4469006-4469387:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4472247-4472255:1:exon

Tnfrsf19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Tnfrsf19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MRAMASRVLLEQGRVLLVTMLVLGCLLCKAMCETGDCRQQEFKDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVPCRPHRFKEDWGFQKCKPCVDCALVNRFQRANCTHTSDAVCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVKISSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDIQYNGSELSCFDQPRLRHCAHRACCQCHRDSAQTYGPVHLIPSLCCEEARSSARAALGCGLHSTATLQERNTASVADAMPAFFGSVSRSMCGEFSDGWPLMRNPLGDGSLCDSYPELTGEDINSLHPENESSTSLDSSGGQDLAGTAAADSSGNFTETTDSPRVREQTLARDVQRTPSQGSWEGSGNLNLGTPTPFQDA
SIO_010081: Tnfrsf19
subclass of: SO_0000673
so part of: Tnfrsf19
location: join(4404449..4404526,4407763..4407873,4428362..4428540,4435646..4435731,4464997..4465161,4466155..4466280,4467771..4467873,4469006..4469387,4472247..4472255)
location: region:4404449-4472255:1
so has part: feature:4404449-4404526:1:exon
so has part: feature:4407763-4407873:1:exon
so has part: feature:4428362-4428540:1:exon
so has part: feature:4435646-4435731:1:exon
so has part: feature:4464997-4465161:1:exon
so has part: feature:4466155-4466280:1:exon
so has part: feature:4467771-4467873:1:exon
so has part: feature:4469006-4469387:1:exon
so has part: feature:4472247-4472255:1:exon

XP_013204693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4404449-4404526:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4407763-4407873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4428362-4428540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4435646-4435731:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4464997-4465161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4466155-4466280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4467771-4467873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4469006-4469387:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4472247-4472255:1:exon

Mipep
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mipep
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4510639..4646880)
location: region:4510639-4646880:-1
so has part: feature:4510639-4646880:-1:exon
subclass of: SO_0000010

101987780
type: Gene
SIO_000068: ncbigene

position:4510639:-1
position: 4510639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4646880:-1
position: 4646880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4510639-4646880:-1:exon

Mipep
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mipep
product: mitochondrial intermediate peptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349217.1
SIO_010081: Mipep
subclass of: SO_0000673
so part of: Mipep
location: complement(join(4510639..4510865,4540261..4540334,4543151..4543272,4570776..4570895,4587428..4587437,4588343..4588400,4592392..4592407,4595572..4595681,4597135..4597339,4598974..4599051,4600435..4600588,4611998..4612050,4617327..4617387,4619231..4619279,4623889..4624045,4624557..4624739,4628763..4628826,4635330..4635416,4636965..4637053,4640330..4640503,4642840..4643058,4644162..4644238,4646796..4646880))
location: region:4510639-4646880:-1
so has part: feature:4646796-4646880:-1:exon
so has part: feature:4644162-4644238:-1:exon
so has part: feature:4642840-4643058:-1:exon
so has part: feature:4640330-4640503:-1:exon
so has part: feature:4636965-4637053:-1:exon
so has part: feature:4635330-4635416:-1:exon
so has part: feature:4628763-4628826:-1:exon
so has part: feature:4624557-4624739:-1:exon
so has part: feature:4623889-4624045:-1:exon
so has part: feature:4619231-4619279:-1:exon
so has part: feature:4617327-4617387:-1:exon
so has part: feature:4611998-4612050:-1:exon
so has part: feature:4600435-4600588:-1:exon
so has part: feature:4598974-4599051:-1:exon
so has part: feature:4597135-4597339:-1:exon
so has part: feature:4595572-4595681:-1:exon
so has part: feature:4592392-4592407:-1:exon
so has part: feature:4588343-4588400:-1:exon
so has part: feature:4587428-4587437:-1:exon
so has part: feature:4570776-4570895:-1:exon
so has part: feature:4543151-4543272:-1:exon
so has part: feature:4540261-4540334:-1:exon
so has part: feature:4510639-4510865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4646796-4646880:-1:exon

position:4646796:-1
position: 4646796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4644162-4644238:-1:exon

position:4644162:-1
position: 4644162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4644238:-1
position: 4644238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4642840-4643058:-1:exon

position:4642840:-1
position: 4642840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4643058:-1
position: 4643058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4640330-4640503:-1:exon

position:4640330:-1
position: 4640330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640503:-1
position: 4640503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4636965-4637053:-1:exon

position:4636965:-1
position: 4636965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4637053:-1
position: 4637053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4635330-4635416:-1:exon

position:4635330:-1
position: 4635330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4635416:-1
position: 4635416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4628763-4628826:-1:exon

position:4628763:-1
position: 4628763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4628826:-1
position: 4628826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4624557-4624739:-1:exon

position:4624557:-1
position: 4624557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4624739:-1
position: 4624739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4623889-4624045:-1:exon

position:4623889:-1
position: 4623889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4624045:-1
position: 4624045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4619231-4619279:-1:exon

position:4619231:-1
position: 4619231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4619279:-1
position: 4619279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4617327-4617387:-1:exon

position:4617327:-1
position: 4617327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4617387:-1
position: 4617387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4611998-4612050:-1:exon

position:4611998:-1
position: 4611998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4612050:-1
position: 4612050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4600435-4600588:-1:exon

position:4600435:-1
position: 4600435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4600588:-1
position: 4600588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4598974-4599051:-1:exon

position:4598974:-1
position: 4598974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4599051:-1
position: 4599051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4597135-4597339:-1:exon

position:4597135:-1
position: 4597135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4597339:-1
position: 4597339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4595572-4595681:-1:exon

position:4595572:-1
position: 4595572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4595681:-1
position: 4595681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4592392-4592407:-1:exon

position:4592392:-1
position: 4592392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4592407:-1
position: 4592407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4588343-4588400:-1:exon

position:4588343:-1
position: 4588343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4588400:-1
position: 4588400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4587428-4587437:-1:exon

position:4587428:-1
position: 4587428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4587437:-1
position: 4587437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4570776-4570895:-1:exon

position:4570776:-1
position: 4570776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4570895:-1
position: 4570895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4543151-4543272:-1:exon

position:4543151:-1
position: 4543151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4543272:-1
position: 4543272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4540261-4540334:-1:exon

position:4540261:-1
position: 4540261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4540334:-1
position: 4540334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4510639-4510865:-1:exon

position:4510865:-1
position: 4510865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mipep
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mipep
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(4588369..4588371),aa:OTHER)
product: LOW QUALITY PROTEIN: mitochondrial intermediate peptidase
translation: MVPPELARGRWDVTVSILPIIASILKCRGLFGYVLGRLSPCPPGYLVVTVNCPQLGPGRVLLVANMLRYGRRLCGLGAGAALRGPTDRGGLLCGGRARGVSTSWSPVGAAFNVKPQGRRWDLLGERQGLFGVPELSTPEGFHVAQKEALRKTEWLVERACTTPPGPQTVLIFDELSDCLCRVADLADFVKIGHPEPAFREAAEEACRSIGTMVEKLNTNVELYQSLWKLLDDKKLMDSLDAETRRVAELFMFDFEISGIHLDEEKRRRAVDLNVKILDLSSAFLMGANFPNKIQKHLLPQHIRHHFARDGSYVVIDGLHAEASDDLVREAAYKIFLYPNAGQLKCLEELLSSRDLLANLVGYPTFSHRALQGTIAQTPETVMQFLEKLSDKLSERAAKDFEMMRDMKMKLNPQNSELMPWDPPYYSGVIRAERYNIEPSLYCPFFSLGACMEGLNILFNKLLGITLYAEQPAKGEVWCDDVRKLAVVHESEGLLGYIYCDFFQRANKPHQDCHFTIRGGRLKEDGSYQLPVVVLMLNLPHSSRDSPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFSNDYRVVSQFARHYQTGQPLEEDMLAVLCTSVRXRVPCTAGDLSLQVFYAALDQIYHGQHPLRKSTTDILMETQEHFYGLPYVPDTAWQLRFSHLVGYGAKYYSYLMSRAVASMVWKECFLQDPFNRAAGERYRREMLAHGGGKEPMLMVQGMLQKCPSIDDFVGALVSDLNLDFETFFMDSK
SIO_010081: Mipep
subclass of: SO_0000673
so part of: Mipep
location: complement(join(4510768..4510865,4540261..4540334,4543151..4543272,4570776..4570895,4587428..4587437,4588343..4588400,4592392..4592407,4595572..4595681,4597135..4597339,4598974..4599051,4600435..4600588,4611998..4612050,4617327..4617387,4619231..4619279,4623889..4624045,4624557..4624739,4628763..4628826,4635330..4635416,4636965..4637053,4640330..4640503,4642840..4643058,4644162..4644238,4646796..4646880))
location: region:4510768-4646880:-1
so has part: feature:4646796-4646880:-1:exon
so has part: feature:4644162-4644238:-1:exon
so has part: feature:4642840-4643058:-1:exon
so has part: feature:4640330-4640503:-1:exon
so has part: feature:4636965-4637053:-1:exon
so has part: feature:4635330-4635416:-1:exon
so has part: feature:4628763-4628826:-1:exon
so has part: feature:4624557-4624739:-1:exon
so has part: feature:4623889-4624045:-1:exon
so has part: feature:4619231-4619279:-1:exon
so has part: feature:4617327-4617387:-1:exon
so has part: feature:4611998-4612050:-1:exon
so has part: feature:4600435-4600588:-1:exon
so has part: feature:4598974-4599051:-1:exon
so has part: feature:4597135-4597339:-1:exon
so has part: feature:4595572-4595681:-1:exon
so has part: feature:4592392-4592407:-1:exon
so has part: feature:4588343-4588400:-1:exon
so has part: feature:4587428-4587437:-1:exon
so has part: feature:4570776-4570895:-1:exon
so has part: feature:4543151-4543272:-1:exon
so has part: feature:4540261-4540334:-1:exon
so has part: feature:4510768-4510865:-1:exon

XP_013204671.1
type: Protein
SIO_000068: ncbiprotein

position:4510768:-1
position: 4510768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4646796-4646880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4644162-4644238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4642840-4643058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4640330-4640503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4636965-4637053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635330-4635416:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4628763-4628826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4624557-4624739:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4623889-4624045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4619231-4619279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4617327-4617387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4611998-4612050:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4600435-4600588:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4598974-4599051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4597135-4597339:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4595572-4595681:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4592392-4592407:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4588343-4588400:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4587428-4587437:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4570776-4570895:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4543151-4543272:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4540261-4540334:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4510768-4510865:-1:exon

LOC101997641
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101997641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4646743..4659959)
location: region:4646743-4659959:-1
so has part: feature:4646743-4659959:-1:exon
subclass of: SO_0000010

101997641
type: Gene
SIO_000068: ncbigene

position:4646743:-1
position: 4646743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659959:-1
position: 4659959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4646743-4659959:-1:exon

LOC101997641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC101997641
product: complement C1q and tumor necrosis factor-related protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005355401.3
SIO_010081: LOC101997641
subclass of: SO_0000673
so part of: LOC101997641
location: complement(join(4646743..4647701,4650509..4650571,4652253..4652439,4659932..4659959))
location: region:4646743-4659959:-1
so has part: feature:4659932-4659959:-1:exon
so has part: feature:4652253-4652439:-1:exon
so has part: feature:4650509-4650571:-1:exon
so has part: feature:4646743-4647701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4659932-4659959:-1:exon

position:4659932:-1
position: 4659932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4652253-4652439:-1:exon

position:4652253:-1
position: 4652253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4652439:-1
position: 4652439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4650509-4650571:-1:exon

position:4650509:-1
position: 4650509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650571:-1
position: 4650571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4646743-4647701:-1:exon

position:4647701:-1
position: 4647701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101997641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC101997641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9
translation: MVPYVEGSPSPCHLIMKIWWLLLVMGACAKSVYSQDTCRQGHSGIPGNPGHNGLPGRDGRDGSKGDKGDTGEPGRPGDPGKDGIRGEKGEPGADGKVEAKGIKGDPGSRGSPGKHGPKGSIGPTGEQGLPGETGPQGQKGDKGDVGPTGPEGLMGSTGPLGPKGLPGPVGPIGKPGPKGEAGPMGPQGEPGVRGMRGWKGDRGEKGKVGEAPSLPKSAFTVGLTVISKFPPPDAPIKFDKILYNELNHYNVATGKFTCHVAGVYYFTYHITVFSRNVQVSLVKNGAKVLHTKDGYMSSEDQASGGIVLELKLGDEVWMQVTGGERFNGLFADEDDDTTFTGFLLFSSS
SIO_010081: LOC101997641
subclass of: SO_0000673
so part of: LOC101997641
location: complement(join(4646929..4647701,4650509..4650571,4652253..4652439,4659932..4659955))
location: region:4646929-4659955:-1
so has part: feature:4659932-4659955:-1:exon
so has part: feature:4652253-4652439:-1:exon
so has part: feature:4650509-4650571:-1:exon
so has part: feature:4646929-4647701:-1:exon

XP_005355458.2
type: Protein
SIO_000068: ncbiprotein

position:4646929:-1
position: 4646929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659955:-1
position: 4659955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4659932-4659955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4652253-4652439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4650509-4650571:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4646929-4647701:-1:exon

Spata13
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Spata13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4660725..4693105)
location: region:4660725-4693105:-1
so has part: feature:4660725-4693105:-1:exon
subclass of: SO_0000010

101997946
type: Gene
SIO_000068: ncbigene

position:4660725:-1
position: 4660725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4693105:-1
position: 4693105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4660725-4693105:-1:exon

Spata13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Spata13
product: spermatogenesis associated 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_013349236.2
SIO_010081: Spata13
subclass of: SO_0000673
so part of: Spata13
location: complement(join(4660725..4664398,4665924..4665998,4668826..4669198,4671135..4671264,4674901..4675133,4676568..4676747,4678776..4678961,4679289..4679468,4680642..4680778,4692974..4693105))
location: region:4660725-4693105:-1
so has part: feature:4692974-4693105:-1:exon
so has part: feature:4680642-4680778:-1:exon
so has part: feature:4679289-4679468:-1:exon
so has part: feature:4678776-4678961:-1:exon
so has part: feature:4676568-4676747:-1:exon
so has part: feature:4674901-4675133:-1:exon
so has part: feature:4671135-4671264:-1:exon
so has part: feature:4668826-4669198:-1:exon
so has part: feature:4665924-4665998:-1:exon
so has part: feature:4660725-4664398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4692974-4693105:-1:exon

position:4692974:-1
position: 4692974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4680642-4680778:-1:exon

position:4680642:-1
position: 4680642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4680778:-1
position: 4680778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4679289-4679468:-1:exon

position:4679289:-1
position: 4679289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4679468:-1
position: 4679468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4678776-4678961:-1:exon

position:4678776:-1
position: 4678776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4678961:-1
position: 4678961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4676568-4676747:-1:exon

position:4676568:-1
position: 4676568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4676747:-1
position: 4676747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4674901-4675133:-1:exon

position:4674901:-1
position: 4674901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4675133:-1
position: 4675133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4671135-4671264:-1:exon

position:4671135:-1
position: 4671135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4671264:-1
position: 4671264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4668826-4669198:-1:exon

position:4668826:-1
position: 4668826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669198:-1
position: 4669198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4665924-4665998:-1:exon

position:4665924:-1
position: 4665924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4665998:-1
position: 4665998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4660725-4664398:-1:exon

position:4664398:-1
position: 4664398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Spata13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Spata13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13
translation: MVARGEIARFWSLESLHMVSSDGGAESSALVDDNGSEEDFSYEELCQANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELPESCSSSHGEEQDEDSSKARHKHPESQQQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSNLMKQSKYRHFFEACRLLQQMIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITRQGKTQQRIFFLFDHQLVSCKKDLLRRDMLYYKGRMDMDAVELVDVEDGRDKDWNLSMRNAFKLVSRTTDEVHLFCARKQEDKARWLQAYADERQRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYSSCPVAPPHQSLPPLHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFHKLTPFRK
SIO_010081: Spata13
subclass of: SO_0000673
so part of: Spata13
location: complement(join(4664223..4664398,4665924..4665998,4668826..4669198,4671135..4671264,4674901..4675133,4676568..4676747,4678776..4678961,4679289..4679468,4680642..4680778,4692974..4693028))
location: region:4664223-4693028:-1
so has part: feature:4692974-4693028:-1:exon
so has part: feature:4680642-4680778:-1:exon
so has part: feature:4679289-4679468:-1:exon
so has part: feature:4678776-4678961:-1:exon
so has part: feature:4676568-4676747:-1:exon
so has part: feature:4674901-4675133:-1:exon
so has part: feature:4671135-4671264:-1:exon
so has part: feature:4668826-4669198:-1:exon
so has part: feature:4665924-4665998:-1:exon
so has part: feature:4664223-4664398:-1:exon

XP_013204690.1
type: Protein
SIO_000068: ncbiprotein

position:4664223:-1
position: 4664223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4693028:-1
position: 4693028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4692974-4693028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4680642-4680778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4679289-4679468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4678776-4678961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4676568-4676747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4674901-4675133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4671135-4671264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668826-4669198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4665924-4665998:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4664223-4664398:-1:exon

Amer2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Amer2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5067417..5075741)
location: region:5067417-5075741:-1
so has part: feature:5067417-5075741:-1:exon
subclass of: SO_0000010

101998232
type: Gene
SIO_000068: ncbigene

position:5067417:-1
position: 5067417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5075741:-1
position: 5075741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5067417-5075741:-1:exon

Amer2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Amer2
product: APC membrane recruitment protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349233.2
SIO_010081: Amer2
subclass of: SO_0000673
so part of: Amer2
location: complement(join(5067417..5070798,5071177..5071894,5074473..5074483,5074630..5075741))
location: region:5067417-5075741:-1
so has part: feature:5074630-5075741:-1:exon
so has part: feature:5074473-5074483:-1:exon
so has part: feature:5071177-5071894:-1:exon
so has part: feature:5067417-5070798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5074630-5075741:-1:exon

position:5074630:-1
position: 5074630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5074473-5074483:-1:exon

position:5074473:-1
position: 5074473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5074483:-1
position: 5074483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5071177-5071894:-1:exon

position:5071177:-1
position: 5071177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5071894:-1
position: 5071894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5067417-5070798:-1:exon

position:5070798:-1
position: 5070798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Amer2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Amer2
product: APC membrane recruitment protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349232.2
SIO_010081: Amer2
subclass of: SO_0000673
so part of: Amer2
location: complement(join(5067417..5071894,5074473..5074483,5074630..5075741))
location: region:5067417-5075741:-1
so has part: feature:5074630-5075741:-1:exon
so has part: feature:5074473-5074483:-1:exon
so has part: feature:5067417-5071894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5074630-5075741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5074473-5074483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5067417-5071894:-1:exon

Amer2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Amer2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 2 isoform X2
translation: METGRSRGGGGGISERXGGGARAGVCRRQEQAGALAADMDSHCECAAETPAAEPPSGKINKAAFKLFKKRKSGGTMPSIFGVKNKGDGKSAGPTGMVRSRTHDGLAEVLVLEGSKKEEPPGGGDHGGARPNPGPPKAAGPGLGSLASSSVAKSHSFFSLLKKNGRSETGKGDPAEASKAGGKQKRGLKGIFSSMRWHRRDKRGKEEEEKAARAAGPGSLVLPGSLTASLECVKEEPPRTARRPDSPGQDAPRHAAGCGDIIADPEEEAGPSCDKHAPGPGKPVLSKKNPSEVAYQGGGEEMASPDEVDDTYLPEFWDMLSQTEDQGQGPQEGTAKAATASDTKLAPETSNDVRCGEVAKDVSSVKRRRLHKIPIDPQQKEEPKHPEKEHQEGVPNSDEGYWDSTTPGPEEDSASSSKKAVIPRDSDSGDALYDLYTEPEGSSAVVPATEDPPCLSRLKPVSPGTITCPLRTPGSLLKDSKIPISIKHLSNLPSSHPVVHQQPARSEMPRTKIPVSKVLVRRVSNRGLAGTTIRAAACHDSAKKL
SIO_010081: Amer2
subclass of: SO_0000673
so part of: Amer2
location: complement(join(5069930..5070798,5071177..5071894,5074473..5074483,5074630..5074666))
location: region:5069930-5074666:-1
so has part: feature:5074630-5074666:-1:exon
so has part: feature:5074473-5074483:-1:exon
so has part: feature:5071177-5071894:-1:exon
so has part: feature:5069930-5070798:-1:exon

XP_013204687.2
type: Protein
SIO_000068: ncbiprotein

position:5069930:-1
position: 5069930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5074666:-1
position: 5074666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5074630-5074666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5074473-5074483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5071177-5071894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5069930-5070798:-1:exon

Amer2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Amer2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 2 isoform X1
translation: METGRSRGGGGGISERXGGGARAGVCRRQEQAGALAADMDSHCECAAETPAAEPPSGKINKAAFKLFKKRKSGGTMPSIFGVKNKGDGKSAGPTGMVRSRTHDGLAEVLVLEGSKKEEPPGGGDHGGARPNPGPPKAAGPGLGSLASSSVAKSHSFFSLLKKNGRSETGKGDPAEASKAGGKQKRGLKGIFSSMRWHRRDKRGKEEEEKAARAAGPGSLVLPGSLTASLECVKEEPPRTARRPDSPGQDAPRHAAGEPEGGEQAPASAERAPARTCLEAASPAGLGDQSARGEDAEGHWRAEKPGAALESGAGEVQAAEDASRTGDVPIKTVPLVDSEGGSGRASAVPDPSSVDPPSDPSADRICLMFSDVTSLKSFDSLTGCGDIIADPEEEAGPSCDKHAPGPGKPVLSKKNPSEVAYQGGGEEMASPDEVDDTYLPEFWDMLSQTEDQGQGPQEGTAKAATASDTKLAPETSNDVRCGEVAKDVSSVKRRRLHKIPIDPQQKEEPKHPEKEHQEGVPNSDEGYWDSTTPGPEEDSASSSKKAVIPRDSDSGDALYDLYTEPEGSSAVVPATEDPPCLSRLKPVSPGTITCPLRTPGSLLKDSKIPISIKHLSNLPSSHPVVHQQPARSEMPRTKIPVSKVLVRRVSNRGLAGTTIRAAACHDSAKKL
SIO_010081: Amer2
subclass of: SO_0000673
so part of: Amer2
location: complement(join(5069930..5071894,5074473..5074483,5074630..5074666))
location: region:5069930-5074666:-1
so has part: feature:5074630-5074666:-1:exon
so has part: feature:5074473-5074483:-1:exon
so has part: feature:5069930-5071894:-1:exon

XP_013204686.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5074630-5074666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5074473-5074483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5069930-5071894:-1:exon

Mtmr6
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Mtmr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5140203..5189999)
location: region:5140203-5189999:-1
so has part: feature:5140203-5189999:-1:exon
subclass of: SO_0000010

101998883
type: Gene
SIO_000068: ncbigene

position:5140203:-1
position: 5140203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5189999:-1
position: 5189999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5140203-5189999:-1:exon

Mtmr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Mtmr6
product: myotubularin related protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005355407.3
SIO_010081: Mtmr6
subclass of: SO_0000673
so part of: Mtmr6
location: complement(join(5140203..5142393,5143455..5143581,5144235..5144366,5145555..5145755,5146105..5146154,5148557..5148682,5149033..5149142,5149985..5150117,5152355..5152489,5165723..5165851,5169117..5169274,5171646..5171808,5174237..5174353,5189859..5189999))
location: region:5140203-5189999:-1
so has part: feature:5189859-5189999:-1:exon
so has part: feature:5174237-5174353:-1:exon
so has part: feature:5171646-5171808:-1:exon
so has part: feature:5169117-5169274:-1:exon
so has part: feature:5165723-5165851:-1:exon
so has part: feature:5152355-5152489:-1:exon
so has part: feature:5149985-5150117:-1:exon
so has part: feature:5149033-5149142:-1:exon
so has part: feature:5148557-5148682:-1:exon
so has part: feature:5146105-5146154:-1:exon
so has part: feature:5145555-5145755:-1:exon
so has part: feature:5144235-5144366:-1:exon
so has part: feature:5143455-5143581:-1:exon
so has part: feature:5140203-5142393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5189859-5189999:-1:exon

position:5189859:-1
position: 5189859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5174237-5174353:-1:exon

position:5174237:-1
position: 5174237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5174353:-1
position: 5174353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5171646-5171808:-1:exon

position:5171646:-1
position: 5171646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5171808:-1
position: 5171808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5169117-5169274:-1:exon

position:5169117:-1
position: 5169117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5169274:-1
position: 5169274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5165723-5165851:-1:exon

position:5165723:-1
position: 5165723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5165851:-1
position: 5165851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5152355-5152489:-1:exon

position:5152355:-1
position: 5152355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5152489:-1
position: 5152489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5149985-5150117:-1:exon

position:5149985:-1
position: 5149985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150117:-1
position: 5150117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5149033-5149142:-1:exon

position:5149033:-1
position: 5149033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5149142:-1
position: 5149142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5148557-5148682:-1:exon

position:5148557:-1
position: 5148557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5148682:-1
position: 5148682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5146105-5146154:-1:exon

position:5146105:-1
position: 5146105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5146154:-1
position: 5146154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5145555-5145755:-1:exon

position:5145555:-1
position: 5145555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5145755:-1
position: 5145755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5144235-5144366:-1:exon

position:5144235:-1
position: 5144235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5144366:-1
position: 5144366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5143455-5143581:-1:exon

position:5143455:-1
position: 5143455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5143581:-1
position: 5143581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5140203-5142393:-1:exon

position:5142393:-1
position: 5142393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mtmr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Mtmr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6
translation: MEHIRTTKVEQVKLLDRFSTNNKSLTGTLYLTATHLLFIDTQQKETWILHHHIASVEKLALTTSGCPLVIQCKNFRIVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLKGWQVIDLAKEYERMGVPNENWKLSDANREYKVCETYPRELYVPKTATPPMIMGSSNFRSKGRLPVLSYCRQGTEAAICRCSQPLSGFSARCVEDEKLLKAISAANSGNHYMYVVDTRPKLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVNGNKGLSVNDFYSGLESSGWLRHIKAVLDAAIFLAKAIVVENASVLVHCSDGWDRTSQVCSLGSLLLEPYYRTMEGFMVLIEKDWISFGHKFSERCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHVHSCQFGNFIGNCQKEREELKLKEKTYSLWPFLLDDRQKYLNPLYSSKSERLTVLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVLNIIMNMNEQNKQLEEDIKDLEAKITQCKNGILTKDLLLGVHPELPALKTSLCLKEQSLLPVNDTLRAIEGSSPADNRYCDYPEEFSKSEPGVVSLEYGVARMTC
SIO_010081: Mtmr6
subclass of: SO_0000673
so part of: Mtmr6
location: complement(join(5142145..5142393,5143455..5143581,5144235..5144366,5145555..5145755,5146105..5146154,5148557..5148682,5149033..5149142,5149985..5150117,5152355..5152489,5165723..5165851,5169117..5169274,5171646..5171808,5174237..5174353,5189859..5189882))
location: region:5142145-5189882:-1
so has part: feature:5189859-5189882:-1:exon
so has part: feature:5174237-5174353:-1:exon
so has part: feature:5171646-5171808:-1:exon
so has part: feature:5169117-5169274:-1:exon
so has part: feature:5165723-5165851:-1:exon
so has part: feature:5152355-5152489:-1:exon
so has part: feature:5149985-5150117:-1:exon
so has part: feature:5149033-5149142:-1:exon
so has part: feature:5148557-5148682:-1:exon
so has part: feature:5146105-5146154:-1:exon
so has part: feature:5145555-5145755:-1:exon
so has part: feature:5144235-5144366:-1:exon
so has part: feature:5143455-5143581:-1:exon
so has part: feature:5142145-5142393:-1:exon

XP_005355464.1
type: Protein
SIO_000068: ncbiprotein

position:5142145:-1
position: 5142145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5189882:-1
position: 5189882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5189859-5189882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5174237-5174353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5171646-5171808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5169117-5169274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5165723-5165851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5152355-5152489:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149985-5150117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5149033-5149142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5148557-5148682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5146105-5146154:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5145555-5145755:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5144235-5144366:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5143455-5143581:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5142145-5142393:-1:exon

Nup58
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Nup58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5201149..5236208
location: region:5201149-5236208:1
so has part: feature:5201149-5236208:1:exon
subclass of: SO_0000010

101999343
type: Gene
SIO_000068: ncbigene

position:5201149:1
position: 5201149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5236208:1
position: 5236208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5201149-5236208:1:exon

Nup58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Nup58
product: nucleoporin 58
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005355409.3
SIO_010081: Nup58
subclass of: SO_0000673
so part of: Nup58
location: join(5201149..5201416,5204925..5205061,5208822..5208971,5209776..5209913,5210749..5210859,5213977..5214001,5215260..5215325,5216029..5216203,5219597..5219676,5221423..5221541,5221911..5221993,5225483..5225684,5230981..5231079,5232697..5232792,5234187..5236208)
location: region:5201149-5236208:1
so has part: feature:5201149-5201416:1:exon
so has part: feature:5204925-5205061:1:exon
so has part: feature:5208822-5208971:1:exon
so has part: feature:5209776-5209913:1:exon
so has part: feature:5210749-5210859:1:exon
so has part: feature:5213977-5214001:1:exon
so has part: feature:5215260-5215325:1:exon
so has part: feature:5216029-5216203:1:exon
so has part: feature:5219597-5219676:1:exon
so has part: feature:5221423-5221541:1:exon
so has part: feature:5221911-5221993:1:exon
so has part: feature:5225483-5225684:1:exon
so has part: feature:5230981-5231079:1:exon
so has part: feature:5232697-5232792:1:exon
so has part: feature:5234187-5236208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5201149-5201416:1:exon

position:5201416:1
position: 5201416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5204925-5205061:1:exon

position:5204925:1
position: 5204925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5205061:1
position: 5205061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5208822-5208971:1:exon

position:5208822:1
position: 5208822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5208971:1
position: 5208971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5209776-5209913:1:exon

position:5209776:1
position: 5209776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5209913:1
position: 5209913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5210749-5210859:1:exon

position:5210749:1
position: 5210749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5210859:1
position: 5210859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5213977-5214001:1:exon

position:5213977:1
position: 5213977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5214001:1
position: 5214001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5215260-5215325:1:exon

position:5215260:1
position: 5215260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5215325:1
position: 5215325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5216029-5216203:1:exon

position:5216029:1
position: 5216029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5216203:1
position: 5216203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5219597-5219676:1:exon

position:5219597:1
position: 5219597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5219676:1
position: 5219676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5221423-5221541:1:exon

position:5221423:1
position: 5221423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5221541:1
position: 5221541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5221911-5221993:1:exon

position:5221911:1
position: 5221911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5221993:1
position: 5221993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5225483-5225684:1:exon

position:5225483:1
position: 5225483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5225684:1
position: 5225684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5230981-5231079:1:exon

position:5230981:1
position: 5230981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5231079:1
position: 5231079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5232697-5232792:1:exon

position:5232697:1
position: 5232697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5232792:1
position: 5232792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5234187-5236208:1:exon

position:5234187:1
position: 5234187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nup58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Nup58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45
translation: MSTGFSFGSGALGSTTVAPGGTGTGSGFSFGTGTSSTPSVGLNFGTLGSSATPASTSASTSGFGTGLFGAKPGFTLGGTSSGTPATTSASTTGFSLGFSKPAASATPFTLPGTSTSASGLTLSSALTSTPAASTGFTLNNLGTTPATTTTASTGLSLGGALAGLGGSLFQSANTATSGLGQNALSLSLGTTAPVSTAGNEGLGGIDFSTSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRNTLNIDKLKLETAQELKNAEIALRTQKTPPGLQHENTAPADYFRVLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLSYRKMFLGDAVDVFEARRTEAKKWQNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGASSGFGCGTTGASTFGFGTTDKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKRPPAGNKRGKR
SIO_010081: Nup58
subclass of: SO_0000673
so part of: Nup58
location: join(5201310..5201416,5204925..5205061,5208822..5208971,5209776..5209913,5210749..5210859,5213977..5214001,5215260..5215325,5216029..5216203,5219597..5219676,5221423..5221541,5221911..5221993,5225483..5225684,5230981..5231079,5232697..5232792,5234187..5234356)
location: region:5201310-5234356:1
so has part: feature:5201310-5201416:1:exon
so has part: feature:5204925-5205061:1:exon
so has part: feature:5208822-5208971:1:exon
so has part: feature:5209776-5209913:1:exon
so has part: feature:5210749-5210859:1:exon
so has part: feature:5213977-5214001:1:exon
so has part: feature:5215260-5215325:1:exon
so has part: feature:5216029-5216203:1:exon
so has part: feature:5219597-5219676:1:exon
so has part: feature:5221423-5221541:1:exon
so has part: feature:5221911-5221993:1:exon
so has part: feature:5225483-5225684:1:exon
so has part: feature:5230981-5231079:1:exon
so has part: feature:5232697-5232792:1:exon
so has part: feature:5234187-5234356:1:exon

XP_005355466.1
type: Protein
SIO_000068: ncbiprotein

position:5201310:1
position: 5201310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5234356:1
position: 5234356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5201310-5201416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5204925-5205061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5208822-5208971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5209776-5209913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5210749-5210859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5213977-5214001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5215260-5215325:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5216029-5216203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5219597-5219676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5221423-5221541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5221911-5221993:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5225483-5225684:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5230981-5231079:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5232697-5232792:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5234187-5234356:1:exon

LOC101999790
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101999790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5251364..5253338
location: region:5251364-5253338:1
so has part: feature:5251364-5253338:1:exon

101999790
type: Gene
SIO_000068: ncbigene

position:5251364:1
position: 5251364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5253338:1
position: 5253338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5251364-5253338:1:exon

LOC101999790
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101999790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101999790
subclass of: SO_0000673
so part of: LOC101999790
location: 5251364..5253338
location: region:5251364-5253338:1
so has part: feature:5251364-5253338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5251364-5253338:1:exon

Atp8a2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Atp8a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5305175..5874121
location: region:5305175-5874121:1
so has part: feature:5305175-5874121:1:exon
subclass of: SO_0000010

101988363
type: Gene
SIO_000068: ncbigene

position:5305175:1
position: 5305175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5874121:1
position: 5874121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5305175-5874121:1:exon

Atp8a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Atp8a2
product: ATPase phospholipid transporting 8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026783162.1
SIO_010081: Atp8a2
subclass of: SO_0000673
so part of: Atp8a2
location: join(5305175..5305610,5390314..5390458,5433574..5433673,5434275..5434373,5435188..5435233,5435802..5435842,5440967..5441040,5442670..5442739,5444518..5444645,5446015..5446126,5449665..5449830,5452593..5452720,5453463..5453540,5456559..5456647,5456891..5456935,5459882..5459957,5462372..5462477,5463125..5463207,5465372..5465421,5467995..5468064,5470282..5470366,5471602..5471741,5475037..5475175,5483369..5483433,5559622..5559794,5624278..5624461,5628224..5628334,5733198..5733258,5735651..5735712,5735901..5735957,5737688..5737795,5818671..5818759,5825803..5825907,5863129..5863220,5871707..5874121)
location: region:5305175-5874121:1
so has part: feature:5305175-5305610:1:exon
so has part: feature:5390314-5390458:1:exon
so has part: feature:5433574-5433673:1:exon
so has part: feature:5434275-5434373:1:exon
so has part: feature:5435188-5435233:1:exon
so has part: feature:5435802-5435842:1:exon
so has part: feature:5440967-5441040:1:exon
so has part: feature:5442670-5442739:1:exon
so has part: feature:5444518-5444645:1:exon
so has part: feature:5446015-5446126:1:exon
so has part: feature:5449665-5449830:1:exon
so has part: feature:5452593-5452720:1:exon
so has part: feature:5453463-5453540:1:exon
so has part: feature:5456559-5456647:1:exon
so has part: feature:5456891-5456935:1:exon
so has part: feature:5459882-5459957:1:exon
so has part: feature:5462372-5462477:1:exon
so has part: feature:5463125-5463207:1:exon
so has part: feature:5465372-5465421:1:exon
so has part: feature:5467995-5468064:1:exon
so has part: feature:5470282-5470366:1:exon
so has part: feature:5471602-5471741:1:exon
so has part: feature:5475037-5475175:1:exon
so has part: feature:5483369-5483433:1:exon
so has part: feature:5559622-5559794:1:exon
so has part: feature:5624278-5624461:1:exon
so has part: feature:5628224-5628334:1:exon
so has part: feature:5733198-5733258:1:exon
so has part: feature:5735651-5735712:1:exon
so has part: feature:5735901-5735957:1:exon
so has part: feature:5737688-5737795:1:exon
so has part: feature:5818671-5818759:1:exon
so has part: feature:5825803-5825907:1:exon
so has part: feature:5863129-5863220:1:exon
so has part: feature:5871707-5874121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5305175-5305610:1:exon

position:5305610:1
position: 5305610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5390314-5390458:1:exon

position:5390314:1
position: 5390314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5390458:1
position: 5390458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5433574-5433673:1:exon

position:5433574:1
position: 5433574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5433673:1
position: 5433673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5434275-5434373:1:exon

position:5434275:1
position: 5434275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5434373:1
position: 5434373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5435188-5435233:1:exon

position:5435188:1
position: 5435188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5435233:1
position: 5435233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5435802-5435842:1:exon

position:5435802:1
position: 5435802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5435842:1
position: 5435842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5440967-5441040:1:exon

position:5440967:1
position: 5440967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5441040:1
position: 5441040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5442670-5442739:1:exon

position:5442670:1
position: 5442670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5442739:1
position: 5442739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5444518-5444645:1:exon

position:5444518:1
position: 5444518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5444645:1
position: 5444645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5446015-5446126:1:exon

position:5446015:1
position: 5446015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5446126:1
position: 5446126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5449665-5449830:1:exon

position:5449665:1
position: 5449665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5449830:1
position: 5449830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5452593-5452720:1:exon

position:5452593:1
position: 5452593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5452720:1
position: 5452720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5453463-5453540:1:exon

position:5453463:1
position: 5453463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5453540:1
position: 5453540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5456559-5456647:1:exon

position:5456559:1
position: 5456559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5456647:1
position: 5456647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5456891-5456935:1:exon

position:5456891:1
position: 5456891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5456935:1
position: 5456935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5459882-5459957:1:exon

position:5459882:1
position: 5459882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5459957:1
position: 5459957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5462372-5462477:1:exon

position:5462372:1
position: 5462372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5462477:1
position: 5462477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5463125-5463207:1:exon

position:5463125:1
position: 5463125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5463207:1
position: 5463207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5465372-5465421:1:exon

position:5465372:1
position: 5465372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5465421:1
position: 5465421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5467995-5468064:1:exon

position:5467995:1
position: 5467995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5468064:1
position: 5468064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5470282-5470366:1:exon

position:5470282:1
position: 5470282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5470366:1
position: 5470366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5471602-5471741:1:exon

position:5471602:1
position: 5471602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5471741:1
position: 5471741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5475037-5475175:1:exon

position:5475037:1
position: 5475037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5475175:1
position: 5475175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5483369-5483433:1:exon

position:5483369:1
position: 5483369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5483433:1
position: 5483433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5559622-5559794:1:exon

position:5559622:1
position: 5559622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5559794:1
position: 5559794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5624278-5624461:1:exon

position:5624278:1
position: 5624278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5624461:1
position: 5624461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5628224-5628334:1:exon

position:5628224:1
position: 5628224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5628334:1
position: 5628334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5733198-5733258:1:exon

position:5733198:1
position: 5733198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5733258:1
position: 5733258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5735651-5735712:1:exon

position:5735651:1
position: 5735651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5735712:1
position: 5735712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5735901-5735957:1:exon

position:5735901:1
position: 5735901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5735957:1
position: 5735957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5737688-5737795:1:exon

position:5737688:1
position: 5737688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5737795:1
position: 5737795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:5818671-5818759:1:exon

position:5818671:1
position: 5818671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5818759:1
position: 5818759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5825803-5825907:1:exon

position:5825803:1
position: 5825803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5825907:1
position: 5825907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:5863129-5863220:1:exon

position:5863129:1
position: 5863129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5863220:1
position: 5863220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5871707-5874121:1:exon

position:5871707:1
position: 5871707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Atp8a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Atp8a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB
translation: MLNGTGLDQAFKMSLPRRARIGASVGPVRSSAGYKKAEDEMSRATSVGDQLEAPARIIYLNQSHLNKFCNNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADSAVNKKKTTVLRNGIWNTIVWKEVAVGDIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTADMQTREVLMKLTGRIECEGPNRHLYDFTGNLHLDGKSSVALGPDQILLRGTQLRNTQWVFGVVVYTGHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKSWYIKKMDTSSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREPSSDDFCRMGPCPSESCDFNDPRLLKNIEDQHPTAPCIQEFLTLLAVCHTVVPEKDGDEIIYQASSPDEAALVKGAKKLGFVFTGRTPYSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVRTPSGQLRLYCKGADNVIFERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASIILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKEDSLDATRAAITQHCTDLGELLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELATVPCQIGTVFVIILILFTNTPLASGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLIWLVFFGVYSTIWPTIPIAPDMKGQATMVLSSASFWLGLFLVPTACLIEDVVWRAAKHTCKKTLLEEVQELETKSRVMGKAMLQDSNGKRMNERDRLIKRLSRKTPPTLFRAGSIQQCVTHGYAFSQEEHGAVTQEEIVRAYDTTKTKSRKK
SIO_010081: Atp8a2
subclass of: SO_0000673
so part of: Atp8a2
location: join(5305535..5305610,5390314..5390458,5433574..5433673,5434275..5434373,5435188..5435233,5435802..5435842,5440967..5441040,5442670..5442739,5444518..5444645,5446015..5446126,5449665..5449830,5452593..5452720,5453463..5453540,5456559..5456647,5456891..5456935,5459882..5459957,5462372..5462477,5463125..5463207,5465372..5465421,5467995..5468064,5470282..5470366,5471602..5471741,5475037..5475175,5483369..5483433,5559622..5559794,5624278..5624461,5628224..5628334,5733198..5733258,5735651..5735712,5735901..5735957,5737688..5737795,5818671..5818759,5825803..5825907,5863129..5863220,5871707..5871804)
location: region:5305535-5871804:1
so has part: feature:5305535-5305610:1:exon
so has part: feature:5390314-5390458:1:exon
so has part: feature:5433574-5433673:1:exon
so has part: feature:5434275-5434373:1:exon
so has part: feature:5435188-5435233:1:exon
so has part: feature:5435802-5435842:1:exon
so has part: feature:5440967-5441040:1:exon
so has part: feature:5442670-5442739:1:exon
so has part: feature:5444518-5444645:1:exon
so has part: feature:5446015-5446126:1:exon
so has part: feature:5449665-5449830:1:exon
so has part: feature:5452593-5452720:1:exon
so has part: feature:5453463-5453540:1:exon
so has part: feature:5456559-5456647:1:exon
so has part: feature:5456891-5456935:1:exon
so has part: feature:5459882-5459957:1:exon
so has part: feature:5462372-5462477:1:exon
so has part: feature:5463125-5463207:1:exon
so has part: feature:5465372-5465421:1:exon
so has part: feature:5467995-5468064:1:exon
so has part: feature:5470282-5470366:1:exon
so has part: feature:5471602-5471741:1:exon
so has part: feature:5475037-5475175:1:exon
so has part: feature:5483369-5483433:1:exon
so has part: feature:5559622-5559794:1:exon
so has part: feature:5624278-5624461:1:exon
so has part: feature:5628224-5628334:1:exon
so has part: feature:5733198-5733258:1:exon
so has part: feature:5735651-5735712:1:exon
so has part: feature:5735901-5735957:1:exon
so has part: feature:5737688-5737795:1:exon
so has part: feature:5818671-5818759:1:exon
so has part: feature:5825803-5825907:1:exon
so has part: feature:5863129-5863220:1:exon
so has part: feature:5871707-5871804:1:exon

XP_026638963.1
type: Protein
SIO_000068: ncbiprotein

position:5305535:1
position: 5305535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5871804:1
position: 5871804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5305535-5305610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5390314-5390458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5433574-5433673:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5434275-5434373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5435188-5435233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5435802-5435842:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5440967-5441040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5442670-5442739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5444518-5444645:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5446015-5446126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5449665-5449830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5452593-5452720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5453463-5453540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5456559-5456647:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5456891-5456935:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5459882-5459957:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5462372-5462477:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5463125-5463207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5465372-5465421:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5467995-5468064:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5470282-5470366:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5471602-5471741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5475037-5475175:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5483369-5483433:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5559622-5559794:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5624278-5624461:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5628224-5628334:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5733198-5733258:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5735651-5735712:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5735901-5735957:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5737688-5737795:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5818671-5818759:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5825803-5825907:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5863129-5863220:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5871707-5871804:1:exon

LOC102000063
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102000063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5874637..5876885)
location: region:5874637-5876885:-1
so has part: feature:5874637-5876885:-1:exon

102000063
type: Gene
SIO_000068: ncbigene

position:5874637:-1
position: 5874637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5876885:-1
position: 5876885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5874637-5876885:-1:exon

LOC102000063
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC102000063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102000063
subclass of: SO_0000673
so part of: LOC102000063
location: complement(5874637..5876885)
location: region:5874637-5876885:-1
so has part: feature:5874637-5876885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5874637-5876885:-1:exon

Shisa2
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Shisa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5888649..5895025)
location: region:5888649-5895025:-1
so has part: feature:5888649-5895025:-1:exon
subclass of: SO_0000010

102000340
type: Gene
SIO_000068: ncbigene

position:5888649:-1
position: 5888649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5895025:-1
position: 5895025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5888649-5895025:-1:exon

Shisa2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Shisa2
product: shisa family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005355410.2
SIO_010081: Shisa2
subclass of: SO_0000673
so part of: Shisa2
location: complement(join(5888649..5890555,5893963..5895025))
location: region:5888649-5895025:-1
so has part: feature:5893963-5895025:-1:exon
so has part: feature:5888649-5890555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5893963-5895025:-1:exon

position:5893963:-1
position: 5893963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5888649-5890555:-1:exon

position:5890555:-1
position: 5890555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Shisa2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Shisa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-2 homolog
translation: MWGGRGLPVTSSGHRASLLQLLLAALLAAGARASGEYCHGWLDAQGVWRIGFQCPERFDGGDATICCGSCALRYCCSSAEARLDQGGCDNDRQQGVGEPGRTDREGPDSSAVPIYVPFLIVGSVFVAFIILGSLVAACCCRCLRPKQDPQQSRAPGGNRLMETIPMIPSASTSRGSSSRQSSTAASSSSSANSGARAPPTRSQTNCCLPEGTMNNVYVNMPTNFSVLNCQQATQIVPHQGQYLHTPYVGYAVQHDSVPMTPVPPFMDGLQPGYRQVQPSFAHTNSEQKMYPAVTV
SIO_010081: Shisa2
subclass of: SO_0000673
so part of: Shisa2
location: complement(join(5890002..5890555,5893963..5894296))
location: region:5890002-5894296:-1
so has part: feature:5893963-5894296:-1:exon
so has part: feature:5890002-5890555:-1:exon

XP_005355467.1
type: Protein
SIO_000068: ncbiprotein

position:5890002:-1
position: 5890002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5894296:-1
position: 5894296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5893963-5894296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5890002-5890555:-1:exon

Cdadc1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cdadc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <5940710..5964898
location: region:5940710-5964898:1
so has part: feature:5940710-5964898:1:exon
subclass of: SO_0000010

102000624
type: Gene
SIO_000068: ncbigene

position:5940710:1
position: 5940710
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5964898:1
position: 5964898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5940710-5964898:1:exon

Cdadc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cdadc1
product: cytidine and dCMP deaminase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_013349235.2
SIO_010081: Cdadc1
subclass of: SO_0000673
so part of: Cdadc1
location: join(<5940710..5940830,5941901..5941998,5944735..5944809,5947038..5947215,5950063..5950632,5955660..5955709,5957499..5957668,5959053..5959242,5963438..5963498,5964389..5964898)
location: region:5940710-5964898:1
so has part: feature:5940710-5940830:1:exon
so has part: feature:5941901-5941998:1:exon
so has part: feature:5944735-5944809:1:exon
so has part: feature:5947038-5947215:1:exon
so has part: feature:5950063-5950632:1:exon
so has part: feature:5955660-5955709:1:exon
so has part: feature:5957499-5957668:1:exon
so has part: feature:5959053-5959242:1:exon
so has part: feature:5963438-5963498:1:exon
so has part: feature:5964389-5964898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5940710-5940830:1:exon

position:5940830:1
position: 5940830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5941901-5941998:1:exon

position:5941901:1
position: 5941901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5941998:1
position: 5941998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5944735-5944809:1:exon

position:5944735:1
position: 5944735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5944809:1
position: 5944809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5947038-5947215:1:exon

position:5947038:1
position: 5947038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5947215:1
position: 5947215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5950063-5950632:1:exon

position:5950063:1
position: 5950063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5950632:1
position: 5950632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5955660-5955709:1:exon

position:5955660:1
position: 5955660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5955709:1
position: 5955709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5957499-5957668:1:exon

position:5957499:1
position: 5957499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5957668:1
position: 5957668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5959053-5959242:1:exon

position:5959053:1
position: 5959053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5959242:1
position: 5959242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5963438-5963498:1:exon

position:5963438:1
position: 5963438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5963498:1
position: 5963498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5964389-5964898:1:exon

position:5964389:1
position: 5964389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cdadc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cdadc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytidine and dCMP deaminase domain-containing protein 1
translation: VGELPWAEASGLGLKEADQMQSLEGSGTGRSVGTQTGSMTGQIPRLSKVNLFTLLSLWMELFPGVEAQGQKSQKNEEENRGPLGDNEELARVSADKKQVKKTGLVVVKNMKIIGLHCSSEDLHTGQIALIKHGSRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPSDPEISLLTEASSSEDAKLDAKAAERLKSNSRAHVCVLLQPLVCYMVQFVEETSYKCDFIQKTAKALQGADTDFYSECKQERLKEFEMLFLISNEDMHKQILMTIGLENLCENPYFSNLRQNMKDLILLLATVASSVPNLKHFGFYCSNPEQITDSHNQSLPQEVARHCMVQARLLAYRTEDHKTGVGAVIWAEGKARSCDGTGAMYFIGCGYNAFPVGSEYADFPHMDDKHKDREIRKFRYIIHAEQNALTFRCQDIKPEERSMIFVTKCPCDECVPLIKGAGIKQIYAGDVDVGKKKADISYMKFGELEGVRKFTWQLNPSETYSFDPNEPERREKHLSIKRSH
SIO_010081: Cdadc1
subclass of: SO_0000673
so part of: Cdadc1
location: join(<5940710..5940830,5941901..5941998,5944735..5944809,5947038..5947215,5950063..5950632,5955660..5955709,5957499..5957668,5959053..5959242,5963438..5963498,5964389..5964417)
location: region:5940710-5964417:1
so has part: feature:5940710-5940830:1:exon
so has part: feature:5941901-5941998:1:exon
so has part: feature:5944735-5944809:1:exon
so has part: feature:5947038-5947215:1:exon
so has part: feature:5950063-5950632:1:exon
so has part: feature:5955660-5955709:1:exon
so has part: feature:5957499-5957668:1:exon
so has part: feature:5959053-5959242:1:exon
so has part: feature:5963438-5963498:1:exon
so has part: feature:5964389-5964417:1:exon

XP_013204689.2
type: Protein
SIO_000068: ncbiprotein

position:5964417:1
position: 5964417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5940710-5940830:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5941901-5941998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5944735-5944809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5947038-5947215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5950063-5950632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5955660-5955709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957499-5957668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5959053-5959242:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5963438-5963498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5964389-5964417:1:exon

Cab39l
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Cab39l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5980504..6096472)
location: region:5980504-6096472:-1
so has part: feature:5980504-6096472:-1:exon
subclass of: SO_0000010

102000899
type: Gene
SIO_000068: ncbigene

position:5980504:-1
position: 5980504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6096472:-1
position: 6096472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5980504-6096472:-1:exon

Cab39l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cab39l
product: calcium binding protein 39 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_026783239.1
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5980504..5981143,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044636,6084554..6084623,6085814..6085952,6096419..6096472))
location: region:5980504-6096472:-1
so has part: feature:6096419-6096472:-1:exon
so has part: feature:6085814-6085952:-1:exon
so has part: feature:6084554-6084623:-1:exon
so has part: feature:6044495-6044636:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5980504-5981143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6096419-6096472:-1:exon

position:6096419:-1
position: 6096419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6085814-6085952:-1:exon

position:6085814:-1
position: 6085814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6085952:-1
position: 6085952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6084554-6084623:-1:exon

position:6084554:-1
position: 6084554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6084623:-1
position: 6084623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6044495-6044636:-1:exon

position:6044495:-1
position: 6044495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6044636:-1
position: 6044636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6041236-6041400:-1:exon

position:6041236:-1
position: 6041236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041400:-1
position: 6041400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6028633-6028751:-1:exon

position:6028633:-1
position: 6028633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6028751:-1
position: 6028751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6018315-6018483:-1:exon

position:6018315:-1
position: 6018315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6018483:-1
position: 6018483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6009062-6009121:-1:exon

position:6009062:-1
position: 6009062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6009121:-1
position: 6009121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6006960-6007025:-1:exon

position:6006960:-1
position: 6006960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6007025:-1
position: 6007025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5999925-6000068:-1:exon

position:5999925:-1
position: 5999925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6000068:-1
position: 6000068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5980504-5981143:-1:exon

position:5981143:-1
position: 5981143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cab39l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cab39l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 39-like isoform X2
translation: MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNDKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGARSPTVEYISSHPHILSMLLKGYEAPQIALRCGIMLRECIRHEPLAKIVLFSSQFRDFFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTVFEEYEKLLQSENYVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKASI
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5981132..5981143,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044605))
location: region:5981132-6044605:-1
so has part: feature:6044495-6044605:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5981132-5981143:-1:exon

XP_026639040.1
type: Protein
SIO_000068: ncbiprotein

position:5981132:-1
position: 5981132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6044605:-1
position: 6044605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6044495-6044605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6041236-6041400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6028633-6028751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6018315-6018483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6009062-6009121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6006960-6007025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5999925-6000068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5981132-5981143:-1:exon

Cab39l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cab39l
product: calcium binding protein 39 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_013349237.2
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5988576..5990501,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044636,6084554..6084623,6085814..6085952,6096419..6096472))
location: region:5988576-6096472:-1
so has part: feature:6096419-6096472:-1:exon
so has part: feature:6085814-6085952:-1:exon
so has part: feature:6084554-6084623:-1:exon
so has part: feature:6044495-6044636:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5988576-5990501:-1:exon

position:5988576:-1
position: 5988576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6096419-6096472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6085814-6085952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6084554-6084623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6044495-6044636:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6041236-6041400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6028633-6028751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6018315-6018483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6009062-6009121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6006960-6007025:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5999925-6000068:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5988576-5990501:-1:exon

position:5990501:-1
position: 5990501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cab39l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cab39l
product: calcium binding protein 39 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005355413.3
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5988576..5990501,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044636,6084554..6084653,6085814..6085952,6096419..6096472))
location: region:5988576-6096472:-1
so has part: feature:6096419-6096472:-1:exon
so has part: feature:6085814-6085952:-1:exon
so has part: feature:6084554-6084653:-1:exon
so has part: feature:6044495-6044636:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5988576-5990501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6096419-6096472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6085814-6085952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6084554-6084653:-1:exon

position:6084653:-1
position: 6084653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6044495-6044636:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6041236-6041400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6028633-6028751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6018315-6018483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6009062-6009121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6006960-6007025:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5999925-6000068:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5988576-5990501:-1:exon

Cab39l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Cab39l
product: calcium binding protein 39 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005355412.3
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5988576..5990501,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044636,6056519..6056938))
location: region:5988576-6056938:-1
so has part: feature:6056519-6056938:-1:exon
so has part: feature:6044495-6044636:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5988576-5990501:-1:exon

position:6056938:-1
position: 6056938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6056519-6056938:-1:exon

position:6056519:-1
position: 6056519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6044495-6044636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6041236-6041400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6028633-6028751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6018315-6018483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6009062-6009121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6006960-6007025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5999925-6000068:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5988576-5990501:-1:exon

Cab39l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cab39l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 39-like isoform X1
translation: MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNDKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGARSPTVEYISSHPHILSMLLKGYEAPQIALRCGIMLRECIRHEPLAKIVLFSSQFRDFFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTVFEEYEKLLQSENYVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKAAP
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5990322..5990501,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044605))
location: region:5990322-6044605:-1
so has part: feature:6044495-6044605:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5990322-5990501:-1:exon

XP_005355469.1
type: Protein
SIO_000068: ncbiprotein

position:5990322:-1
position: 5990322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6044495-6044605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6041236-6041400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6028633-6028751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6018315-6018483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6009062-6009121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6006960-6007025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5999925-6000068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5990322-5990501:-1:exon

Cab39l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cab39l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 39-like isoform X1
translation: MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNDKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGARSPTVEYISSHPHILSMLLKGYEAPQIALRCGIMLRECIRHEPLAKIVLFSSQFRDFFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTVFEEYEKLLQSENYVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKAAP
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5990322..5990501,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044605))
location: region:5990322-6044605:-1
so has part: feature:6044495-6044605:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5990322-5990501:-1:exon

XP_005355470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6044495-6044605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6041236-6041400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6028633-6028751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6018315-6018483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6009062-6009121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6006960-6007025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5999925-6000068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5990322-5990501:-1:exon

Cab39l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Cab39l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 39-like isoform X1
translation: MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNDKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGARSPTVEYISSHPHILSMLLKGYEAPQIALRCGIMLRECIRHEPLAKIVLFSSQFRDFFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTVFEEYEKLLQSENYVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKAAP
SIO_010081: Cab39l
subclass of: SO_0000673
so part of: Cab39l
location: complement(join(5990322..5990501,5999925..6000068,6006960..6007025,6009062..6009121,6018315..6018483,6028633..6028751,6041236..6041400,6044495..6044605))
location: region:5990322-6044605:-1
so has part: feature:6044495-6044605:-1:exon
so has part: feature:6041236-6041400:-1:exon
so has part: feature:6028633-6028751:-1:exon
so has part: feature:6018315-6018483:-1:exon
so has part: feature:6009062-6009121:-1:exon
so has part: feature:6006960-6007025:-1:exon
so has part: feature:5999925-6000068:-1:exon
so has part: feature:5990322-5990501:-1:exon

XP_013204691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6044495-6044605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6041236-6041400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6028633-6028751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6018315-6018483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6009062-6009121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6006960-6007025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5999925-6000068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5990322-5990501:-1:exon

LOC102001641
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC102001641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6096689..6162470
location: region:6096689-6162470:1
so has part: feature:6096689-6162470:1:exon
subclass of: SO_0000010

102001641
type: Gene
SIO_000068: ncbigene

position:6096689:1
position: 6096689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6162470:1
position: 6162470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6096689-6162470:1:exon

LOC102001641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC102001641
product: histone-lysine N-methyltransferase SETDB2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005355416.3
SIO_010081: LOC102001641
subclass of: SO_0000673
so part of: LOC102001641
location: join(6096689..6096909,6099463..6099796,6103278..6103403,6104695..6104754,6107925..6108018,6115353..6115913,6117846..6117962,6120290..6120459,6121693..6121891,6122523..6122622,6123152..6123242,6125820..6126157,6129556..6129644,6131208..6131295,6143197..6143316,6146801..6146908,6154020..6154153,6155244..6155293,6156307..6156374,6157103..6157166,6157741..6157872,6159511..6159582,6161686..6162470)
location: region:6096689-6162470:1
so has part: feature:6096689-6096909:1:exon
so has part: feature:6099463-6099796:1:exon
so has part: feature:6103278-6103403:1:exon
so has part: feature:6104695-6104754:1:exon
so has part: feature:6107925-6108018:1:exon
so has part: feature:6115353-6115913:1:exon
so has part: feature:6117846-6117962:1:exon
so has part: feature:6120290-6120459:1:exon
so has part: feature:6121693-6121891:1:exon
so has part: feature:6122523-6122622:1:exon
so has part: feature:6123152-6123242:1:exon
so has part: feature:6125820-6126157:1:exon
so has part: feature:6129556-6129644:1:exon
so has part: feature:6131208-6131295:1:exon
so has part: feature:6143197-6143316:1:exon
so has part: feature:6146801-6146908:1:exon
so has part: feature:6154020-6154153:1:exon
so has part: feature:6155244-6155293:1:exon
so has part: feature:6156307-6156374:1:exon
so has part: feature:6157103-6157166:1:exon
so has part: feature:6157741-6157872:1:exon
so has part: feature:6159511-6159582:1:exon
so has part: feature:6161686-6162470:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6096689-6096909:1:exon

position:6096909:1
position: 6096909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6099463-6099796:1:exon

position:6099463:1
position: 6099463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6099796:1
position: 6099796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6103278-6103403:1:exon

position:6103278:1
position: 6103278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6103403:1
position: 6103403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6104695-6104754:1:exon

position:6104695:1
position: 6104695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6104754:1
position: 6104754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6107925-6108018:1:exon

position:6107925:1
position: 6107925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6108018:1
position: 6108018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6115353-6115913:1:exon

position:6115353:1
position: 6115353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6115913:1
position: 6115913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6117846-6117962:1:exon

position:6117846:1
position: 6117846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117962:1
position: 6117962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6120290-6120459:1:exon

position:6120290:1
position: 6120290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6120459:1
position: 6120459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6121693-6121891:1:exon

position:6121693:1
position: 6121693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6121891:1
position: 6121891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6122523-6122622:1:exon

position:6122523:1
position: 6122523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6122622:1
position: 6122622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6123152-6123242:1:exon

position:6123152:1
position: 6123152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123242:1
position: 6123242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6125820-6126157:1:exon

position:6125820:1
position: 6125820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6126157:1
position: 6126157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6129556-6129644:1:exon

position:6129556:1
position: 6129556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6129644:1
position: 6129644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6131208-6131295:1:exon

position:6131208:1
position: 6131208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6131295:1
position: 6131295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6143197-6143316:1:exon

position:6143197:1
position: 6143197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6143316:1
position: 6143316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6146801-6146908:1:exon

position:6146801:1
position: 6146801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6146908:1
position: 6146908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6154020-6154153:1:exon

position:6154020:1
position: 6154020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6154153:1
position: 6154153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6155244-6155293:1:exon

position:6155244:1
position: 6155244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6155293:1
position: 6155293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6156307-6156374:1:exon

position:6156307:1
position: 6156307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6156374:1
position: 6156374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6157103-6157166:1:exon

position:6157103:1
position: 6157103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6157166:1
position: 6157166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6157741-6157872:1:exon

position:6157741:1
position: 6157741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6157872:1
position: 6157872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6159511-6159582:1:exon

position:6159511:1
position: 6159511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6159582:1
position: 6159582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6161686-6162470:1:exon

position:6161686:1
position: 6161686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102001641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC102001641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB2
translation: MGERNGDARTFWLELQDDGKVDFMFEKTQDVLQSLKKKIKDGTATNKDYVQAMILVNEATIRNSAIKDHIPVTQTEQEHRSIVFPSASCENFPEDSTTLSPGQKALLPANSKAADLEEKECPLSVSFQSHICSSACLMETPLSLKGENPLQRPIRCHFQRRHAKTNSHSSALHVNYKTPCGRSLRNMEEVFHYLIETECTFLFTDNFSFNTYVQLTRNHPKQDEVVSDVDISNGMEPVPISFCNEVDSRKLPQFKYRRTVWPRACYLNSSSMFSASCDCSEGCIDIQKCACLQLTAKNAKACSLLPDGVCTGYNYKRLQRLIPTGIYECNLLCKCSRQLCQNRVVQHGPQVRLQVFKSEKKGWGVRCLDDIDRGTFVCIYSGRLLSRATPEKTNTDKNRREQQNHMENELSKKRKIEVACSDCETQPSSPKMEQCSLKFSSDLREPVIEMNCRNVSKTQRHSVIRSPKSKTTIFHCNEKDTGFVSSESTTPEDENGFKPAPEHLNSKARAHEDVSSNQVGYSEDGQLVESDVMDTTRSREDPSPEGRWKHVATVDNKKTEKVLEVAVRSREGGPAASPSQPGSCHEELPNERTKTLSPSVMSLGEENVFLLDASKEGNVGRFLNHSCSPNLCVQNVFVETHDRNFPLVAFFTNRYVKARTELTWDYGYEAGTVPEKEILCQCGDCQAPEMMEKKICAFCPENHDWSVLYCARSENIAAHENCLLYSSGLVECEDHGHLSKARNFDVKSVKKEFRRGRRLTCTLCNKKGATVGCEEKSCAKNYHFFCAKKDNSVVQVDAVKGTYILFCQQHAPELPGTSQGAEGPSLQKKRGSKKRLPSSIPEQPTNMKFSRFKKRMTEEAPDHKDATVKVPFIKKCKEAGLLNELFEGILEKLDSIQGKLLNETASESDYEDIETLLFDCGVFEDTLIKFQKAIKSKACEQEEMQRQLKQQLEALGNLEQALCSFQENGDLNHSSSTSRVSPSSLFECEDSTD
SIO_010081: LOC102001641
subclass of: SO_0000673
so part of: LOC102001641
location: join(6099781..6099796,6103278..6103403,6104695..6104754,6107925..6108018,6115353..6115913,6117846..6117962,6120290..6120459,6121693..6121891,6122523..6122622,6123152..6123242,6125820..6126157,6129556..6129644,6131208..6131295,6143197..6143316,6146801..6146908,6154020..6154153,6155244..6155293,6156307..6156374,6157103..6157166,6157741..6157872,6159511..6159582,6161686..6161870)
location: region:6099781-6161870:1
so has part: feature:6099781-6099796:1:exon
so has part: feature:6103278-6103403:1:exon
so has part: feature:6104695-6104754:1:exon
so has part: feature:6107925-6108018:1:exon
so has part: feature:6115353-6115913:1:exon
so has part: feature:6117846-6117962:1:exon
so has part: feature:6120290-6120459:1:exon
so has part: feature:6121693-6121891:1:exon
so has part: feature:6122523-6122622:1:exon
so has part: feature:6123152-6123242:1:exon
so has part: feature:6125820-6126157:1:exon
so has part: feature:6129556-6129644:1:exon
so has part: feature:6131208-6131295:1:exon
so has part: feature:6143197-6143316:1:exon
so has part: feature:6146801-6146908:1:exon
so has part: feature:6154020-6154153:1:exon
so has part: feature:6155244-6155293:1:exon
so has part: feature:6156307-6156374:1:exon
so has part: feature:6157103-6157166:1:exon
so has part: feature:6157741-6157872:1:exon
so has part: feature:6159511-6159582:1:exon
so has part: feature:6161686-6161870:1:exon

XP_005355473.2
type: Protein
SIO_000068: ncbiprotein

position:6099781:1
position: 6099781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6161870:1
position: 6161870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6099781-6099796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6103278-6103403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6104695-6104754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6107925-6108018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6115353-6115913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6117846-6117962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6120290-6120459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6121693-6121891:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6122523-6122622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6123152-6123242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6125820-6126157:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6129556-6129644:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6131208-6131295:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6143197-6143316:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6146801-6146908:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6154020-6154153:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6155244-6155293:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6156307-6156374:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6157103-6157166:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6157741-6157872:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6159511-6159582:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6161686-6161870:1:exon

Rcbtb1
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Rcbtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6150670..6207036)
location: region:6150670-6207036:-1
so has part: feature:6150670-6207036:-1:exon
subclass of: SO_0000010

102002097
type: Gene
SIO_000068: ncbigene

position:6150670:-1
position: 6150670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6207036:-1
position: 6207036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6150670-6207036:-1:exon

Rcbtb1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 79684
gene: Rcbtb1
product: RCC1 and BTB domain containing protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003377668.1
SIO_010081: Rcbtb1
so part of: Rcbtb1
location: complement(join(6150670..6150890,6166604..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193612,6193727..6193795,6194394..6194561,6206139..6206833))
location: region:6150670-6206833:-1
so has part: feature:6206139-6206833:-1:exon
so has part: feature:6194394-6194561:-1:exon
so has part: feature:6193727-6193795:-1:exon
so has part: feature:6193443-6193612:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6166604-6167251:-1:exon
so has part: feature:6150670-6150890:-1:exon

position:6206833:-1
position: 6206833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6206139-6206833:-1:exon

position:6206139:-1
position: 6206139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6194394-6194561:-1:exon

position:6194394:-1
position: 6194394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6194561:-1
position: 6194561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6193727-6193795:-1:exon

position:6193727:-1
position: 6193727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6193795:-1
position: 6193795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6193443-6193612:-1:exon

position:6193443:-1
position: 6193443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6193612:-1
position: 6193612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6192990-6193140:-1:exon

position:6192990:-1
position: 6192990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6193140:-1
position: 6193140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6188839-6189005:-1:exon

position:6188839:-1
position: 6188839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6189005:-1
position: 6189005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6184037-6184195:-1:exon

position:6184037:-1
position: 6184037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6184195:-1
position: 6184195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6181045-6181152:-1:exon

position:6181045:-1
position: 6181045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6181152:-1
position: 6181152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6180536-6180678:-1:exon

position:6180536:-1
position: 6180536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6180678:-1
position: 6180678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6178885-6179075:-1:exon

position:6178885:-1
position: 6178885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6179075:-1
position: 6179075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6177448-6177574:-1:exon

position:6177448:-1
position: 6177448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6177574:-1
position: 6177574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6175865-6176016:-1:exon

position:6175865:-1
position: 6175865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6176016:-1
position: 6176016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6175102-6175232:-1:exon

position:6175102:-1
position: 6175102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6175232:-1
position: 6175232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6166604-6167251:-1:exon

position:6166604:-1
position: 6166604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6167251:-1
position: 6167251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6150670-6150890:-1:exon

position:6150890:-1
position: 6150890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rcbtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rcbtb1
product: RCC1 and BTB domain containing protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_026783184.1
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6166485..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193612,6193727..6193795,6206872..6207036))
location: region:6166485-6207036:-1
so has part: feature:6206872-6207036:-1:exon
so has part: feature:6193727-6193795:-1:exon
so has part: feature:6193443-6193612:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6166485-6167251:-1:exon

position:6166485:-1
position: 6166485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6206872-6207036:-1:exon

position:6206872:-1
position: 6206872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6193727-6193795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6193443-6193612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6166485-6167251:-1:exon

Rcbtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rcbtb1
product: RCC1 and BTB domain containing protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005355418.2
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6166485..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193612,6193727..6193795,6194394..6194561,6206139..6206286,6206872..6207036))
location: region:6166485-6207036:-1
so has part: feature:6206872-6207036:-1:exon
so has part: feature:6206139-6206286:-1:exon
so has part: feature:6194394-6194561:-1:exon
so has part: feature:6193727-6193795:-1:exon
so has part: feature:6193443-6193612:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6166485-6167251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6206872-6207036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6206139-6206286:-1:exon

position:6206286:-1
position: 6206286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6194394-6194561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6193727-6193795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6193443-6193612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6166485-6167251:-1:exon

Rcbtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rcbtb1
product: RCC1 and BTB domain containing protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_026783182.1
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6166485..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193612,6193727..6193795,6206139..6206833))
location: region:6166485-6206833:-1
so has part: feature:6206139-6206833:-1:exon
so has part: feature:6193727-6193795:-1:exon
so has part: feature:6193443-6193612:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6166485-6167251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6206139-6206833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6193727-6193795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6193443-6193612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6166485-6167251:-1:exon

Rcbtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rcbtb1
product: RCC1 and BTB domain containing protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_013349241.2
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6166485..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193609,6193727..6193795,6194394..6194561,6206139..6206833))
location: region:6166485-6206833:-1
so has part: feature:6206139-6206833:-1:exon
so has part: feature:6194394-6194561:-1:exon
so has part: feature:6193727-6193795:-1:exon
so has part: feature:6193443-6193609:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6166485-6167251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6206139-6206833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6194394-6194561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6193727-6193795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6193443-6193609:-1:exon

position:6193609:-1
position: 6193609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6166485-6167251:-1:exon

Rcbtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Rcbtb1
product: RCC1 and BTB domain containing protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_026783183.1
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6166485..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193612,6193727..6193795,6200657..6200766,6206139..6206833))
location: region:6166485-6206833:-1
so has part: feature:6206139-6206833:-1:exon
so has part: feature:6200657-6200766:-1:exon
so has part: feature:6193727-6193795:-1:exon
so has part: feature:6193443-6193612:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6166485-6167251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6206139-6206833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200657-6200766:-1:exon

position:6200657:-1
position: 6200657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6200766:-1
position: 6200766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6193727-6193795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6193443-6193612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6166485-6167251:-1:exon

Rcbtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rcbtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1 and BTB domain-containing protein 1
translation: MVDVGKWPIFTLLSPQETASIRKACVFGGSANEAIYVTDKDEVFVFGLNYSNCLGTGDNQSTLVPKRLEALCGKKIKSLSYGSGPHVLLSTEDGAVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHAKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHNVCVNQIACGYAHTLALTDEGLLYAWGANTYGQLGNGNKINVLNPTHIMVEKERVVEIAACHTTHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDHVFACFATPAVSWHLLSVEHEDFSTVADSLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKRLCQHIIKQGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTDVTQTAAFWQMDGPLLKEFIAKASKCGAFKN
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6167111..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193568))
location: region:6167111-6193568:-1
so has part: feature:6193443-6193568:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6167111-6167251:-1:exon

XP_026638983.1
type: Protein
SIO_000068: ncbiprotein

position:6167111:-1
position: 6167111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6193568:-1
position: 6193568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6193443-6193568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6167111-6167251:-1:exon

Rcbtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rcbtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1 and BTB domain-containing protein 1
translation: MVDVGKWPIFTLLSPQETASIRKACVFGGSANEAIYVTDKDEVFVFGLNYSNCLGTGDNQSTLVPKRLEALCGKKIKSLSYGSGPHVLLSTEDGAVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHAKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHNVCVNQIACGYAHTLALTDEGLLYAWGANTYGQLGNGNKINVLNPTHIMVEKERVVEIAACHTTHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDHVFACFATPAVSWHLLSVEHEDFSTVADSLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKRLCQHIIKQGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTDVTQTAAFWQMDGPLLKEFIAKASKCGAFKN
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6167111..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193568))
location: region:6167111-6193568:-1
so has part: feature:6193443-6193568:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6167111-6167251:-1:exon

XP_026638984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6193443-6193568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6167111-6167251:-1:exon

Rcbtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rcbtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1 and BTB domain-containing protein 1
translation: MVDVGKWPIFTLLSPQETASIRKACVFGGSANEAIYVTDKDEVFVFGLNYSNCLGTGDNQSTLVPKRLEALCGKKIKSLSYGSGPHVLLSTEDGAVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHAKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHNVCVNQIACGYAHTLALTDEGLLYAWGANTYGQLGNGNKINVLNPTHIMVEKERVVEIAACHTTHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDHVFACFATPAVSWHLLSVEHEDFSTVADSLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKRLCQHIIKQGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTDVTQTAAFWQMDGPLLKEFIAKASKCGAFKN
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6167111..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193568))
location: region:6167111-6193568:-1
so has part: feature:6193443-6193568:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6167111-6167251:-1:exon

XP_026638985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6193443-6193568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6167111-6167251:-1:exon

Rcbtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rcbtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1 and BTB domain-containing protein 1
translation: MVDVGKWPIFTLLSPQETASIRKACVFGGSANEAIYVTDKDEVFVFGLNYSNCLGTGDNQSTLVPKRLEALCGKKIKSLSYGSGPHVLLSTEDGAVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHAKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHNVCVNQIACGYAHTLALTDEGLLYAWGANTYGQLGNGNKINVLNPTHIMVEKERVVEIAACHTTHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDHVFACFATPAVSWHLLSVEHEDFSTVADSLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKRLCQHIIKQGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTDVTQTAAFWQMDGPLLKEFIAKASKCGAFKN
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6167111..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193568))
location: region:6167111-6193568:-1
so has part: feature:6193443-6193568:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6167111-6167251:-1:exon

XP_005355475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6193443-6193568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6167111-6167251:-1:exon

Rcbtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Rcbtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1 and BTB domain-containing protein 1
translation: MVDVGKWPIFTLLSPQETASIRKACVFGGSANEAIYVTDKDEVFVFGLNYSNCLGTGDNQSTLVPKRLEALCGKKIKSLSYGSGPHVLLSTEDGAVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHAKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHNVCVNQIACGYAHTLALTDEGLLYAWGANTYGQLGNGNKINVLNPTHIMVEKERVVEIAACHTTHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDHVFACFATPAVSWHLLSVEHEDFSTVADSLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKRLCQHIIKQGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTDVTQTAAFWQMDGPLLKEFIAKASKCGAFKN
SIO_010081: Rcbtb1
subclass of: SO_0000673
so part of: Rcbtb1
location: complement(join(6167111..6167251,6175102..6175232,6175865..6176016,6177448..6177574,6178885..6179075,6180536..6180678,6181045..6181152,6184037..6184195,6188839..6189005,6192990..6193140,6193443..6193568))
location: region:6167111-6193568:-1
so has part: feature:6193443-6193568:-1:exon
so has part: feature:6192990-6193140:-1:exon
so has part: feature:6188839-6189005:-1:exon
so has part: feature:6184037-6184195:-1:exon
so has part: feature:6181045-6181152:-1:exon
so has part: feature:6180536-6180678:-1:exon
so has part: feature:6178885-6179075:-1:exon
so has part: feature:6177448-6177574:-1:exon
so has part: feature:6175865-6176016:-1:exon
so has part: feature:6175102-6175232:-1:exon
so has part: feature:6167111-6167251:-1:exon

XP_013204695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6193443-6193568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6192990-6193140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6188839-6189005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6184037-6184195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6181045-6181152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180536-6180678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6178885-6179075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6177448-6177574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6175865-6176016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6175102-6175232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6167111-6167251:-1:exon

LOC106143962
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC106143962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6207311..6220487
location: region:6207311-6220487:1
so has part: feature:6207311-6220487:1:exon
subclass of: SO_0000010

106143962
type: Gene
SIO_000068: ncbigene

position:6207311:1
position: 6207311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6220487:1
position: 6220487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6207311-6220487:1:exon

LOC106143962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC106143962
product: uncharacterized LOC106143962, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013349223.2
SIO_010081: LOC106143962
subclass of: SO_0000673
so part of: LOC106143962
location: join(6207311..6207588,6210879..6211072,6211902..6212002,6212472..6212630,6212772..6212973,6215061..6215362,6215579..6215647,6218266..6218354,6220332..6220487)
location: region:6207311-6220487:1
so has part: feature:6207311-6207588:1:exon
so has part: feature:6210879-6211072:1:exon
so has part: feature:6211902-6212002:1:exon
so has part: feature:6212472-6212630:1:exon
so has part: feature:6212772-6212973:1:exon
so has part: feature:6215061-6215362:1:exon
so has part: feature:6215579-6215647:1:exon
so has part: feature:6218266-6218354:1:exon
so has part: feature:6220332-6220487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6207311-6207588:1:exon

position:6207588:1
position: 6207588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6210879-6211072:1:exon

position:6210879:1
position: 6210879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6211072:1
position: 6211072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6211902-6212002:1:exon

position:6211902:1
position: 6211902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6212002:1
position: 6212002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6212472-6212630:1:exon

position:6212472:1
position: 6212472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6212630:1
position: 6212630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6212772-6212973:1:exon

position:6212772:1
position: 6212772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6212973:1
position: 6212973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6215061-6215362:1:exon

position:6215061:1
position: 6215061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6215362:1
position: 6215362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6215579-6215647:1:exon

position:6215579:1
position: 6215579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6215647:1
position: 6215647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6218266-6218354:1:exon

position:6218266:1
position: 6218266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6218354:1
position: 6218354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6220332-6220487:1:exon

position:6220332:1
position: 6220332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106143962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC106143962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC106143962 isoform X2
translation: MGCSSTAQPLKPPWEMITGPSQNYHGSLKRPVMSHLIASVHLIPSQPSSLHPAIYVHPLSVFYPTSFPTLKNTFYFPTLMMAMPSSSCLAKLSANRPAVFQPSSYLSTLMTTPPRRVPLERYLVSLSHPEADCPQLDWELRKNSPDMEPGIEGNELAPTSLVQGKQPPETQTGNQEAEESQALVKFGAFTQNMKFQNDKIPT
SIO_010081: LOC106143962
subclass of: SO_0000673
so part of: LOC106143962
location: join(6212862..6212973,6215061..6215362,6215579..6215647,6218266..6218354,6220332..6220368)
location: region:6212862-6220368:1
so has part: feature:6212862-6212973:1:exon
so has part: feature:6215061-6215362:1:exon
so has part: feature:6215579-6215647:1:exon
so has part: feature:6218266-6218354:1:exon
so has part: feature:6220332-6220368:1:exon

XP_013204677.1
type: Protein
SIO_000068: ncbiprotein

position:6212862:1
position: 6212862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6220368:1
position: 6220368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6212862-6212973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6215061-6215362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6215579-6215647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6218266-6218354:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6220332-6220368:1:exon

LOC106143962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC106143962
product: uncharacterized LOC106143962, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013349224.2
SIO_010081: LOC106143962
subclass of: SO_0000673
so part of: LOC106143962
location: join(6214599..6215362,6215579..6215647,6218266..6218364,6220332..6220487)
location: region:6214599-6220487:1
so has part: feature:6214599-6215362:1:exon
so has part: feature:6215579-6215647:1:exon
so has part: feature:6218266-6218364:1:exon
so has part: feature:6220332-6220487:1:exon

position:6214599:1
position: 6214599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6214599-6215362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6215579-6215647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6218266-6218364:1:exon

position:6218364:1
position: 6218364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6220332-6220487:1:exon

LOC106143962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: LOC106143962
product: uncharacterized LOC106143962, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013349222.2
SIO_010081: LOC106143962
subclass of: SO_0000673
so part of: LOC106143962
location: join(6214599..6215362,6215579..6215647,6218266..6218354,6220332..6220487)
location: region:6214599-6220487:1
so has part: feature:6214599-6215362:1:exon
so has part: feature:6215579-6215647:1:exon
so has part: feature:6218266-6218354:1:exon
so has part: feature:6220332-6220487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6214599-6215362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6215579-6215647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6218266-6218354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6220332-6220487:1:exon

LOC106143962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC106143962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC106143962 isoform X1
translation: MALQGSGKMRRQHPRILGSLRNPLPLPLPLQTPPLYFFPASVHLIPSQPSSLHPAIYVHPLSVFYPTSFPTLKNTFYFPTLMMAMPSSSCLAKLSANRPAVFQPSSYLSTLMTTPPRRVPLERYLVSLSHPEADCPQLDWELRKNSPDMEPGIEGNELAPTSLVQGKQPPETQTGNQEAEESQALVKFGAFTQNMKFQNDKIPT
SIO_010081: LOC106143962
subclass of: SO_0000673
so part of: LOC106143962
location: join(6214943..6215362,6215579..6215647,6218266..6218354,6220332..6220368)
location: region:6214943-6220368:1
so has part: feature:6214943-6215362:1:exon
so has part: feature:6215579-6215647:1:exon
so has part: feature:6218266-6218354:1:exon
so has part: feature:6220332-6220368:1:exon

XP_013204676.1
type: Protein
SIO_000068: ncbiprotein

position:6214943:1
position: 6214943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6214943-6215362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6215579-6215647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6218266-6218354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6220332-6220368:1:exon

LOC106143962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: LOC106143962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC106143962 isoform X3
translation: MALQGSGKMRRQHPRILGSLRNPLPLPLPLQTPPLYFFPASVHLIPSQPSSLHPAIYVHPLSVFYPTSFPTLKNTFYFPTLMMAMPSSSCLAKLSANRPAVFQPSSYLSTLMTTPPRRVPLERYLVSLSHPEADCPQLDWELRKNSPDMEPGIEGNELAPTSLVQGKQPPETQTGNQEAEESQALVKFGAFTQ
SIO_010081: LOC106143962
subclass of: SO_0000673
so part of: LOC106143962
location: join(6214943..6215362,6215579..6215647,6218266..6218358)
location: region:6214943-6218358:1
so has part: feature:6214943-6215362:1:exon
so has part: feature:6215579-6215647:1:exon
so has part: feature:6218266-6218358:1:exon

XP_013204678.1
type: Protein
SIO_000068: ncbiprotein

position:6218358:1
position: 6218358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6214943-6215362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6215579-6215647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6218266-6218358:1:exon

LOC101978917
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101978917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7255275..7255764)
location: region:7255275-7255764:-1
so has part: feature:7255275-7255764:-1:exon

101978917
type: Gene
SIO_000068: ncbigene

position:7255275:-1
position: 7255275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7255764:-1
position: 7255764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7255275-7255764:-1:exon

LOC101978917
type: Exon
subclass of: SO_0000147
RO_0002162: 79684
gene: LOC101978917
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101978917
subclass of: SO_0000673
so part of: LOC101978917
location: complement(7255275..7255764)
location: region:7255275-7255764:-1
so has part: feature:7255275-7255764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7255275-7255764:-1:exon

Fgf9
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: Fgf9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7277442..7313183)
location: region:7277442-7313183:-1
so has part: feature:7277442-7313183:-1:exon
subclass of: SO_0000010

101979203
type: Gene
SIO_000068: ncbigene

position:7277442:-1
position: 7277442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7313183:-1
position: 7313183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7277442-7313183:-1:exon

Fgf9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fgf9
product: fibroblast growth factor 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005355419.3
SIO_010081: Fgf9
subclass of: SO_0000673
so part of: Fgf9
location: complement(join(7277442..7278208,7302938..7303041,7312145..7313183))
location: region:7277442-7313183:-1
so has part: feature:7312145-7313183:-1:exon
so has part: feature:7302938-7303041:-1:exon
so has part: feature:7277442-7278208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7312145-7313183:-1:exon

position:7312145:-1
position: 7312145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7302938-7303041:-1:exon

position:7302938:-1
position: 7302938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7303041:-1
position: 7303041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7277442-7278208:-1:exon

position:7278208:-1
position: 7278208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fgf9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 79684
gene: Fgf9
product: fibroblast growth factor 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_026783280.1
SIO_010081: Fgf9
subclass of: SO_0000673
so part of: Fgf9
location: complement(join(7277442..7278208,7302938..7303041,7309673..7309926))
location: region:7277442-7309926:-1
so has part: feature:7309673-7309926:-1:exon
so has part: feature:7302938-7303041:-1:exon
so has part: feature:7277442-7278208:-1:exon

position:7309926:-1
position: 7309926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7309673-7309926:-1:exon

position:7309673:-1
position: 7309673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7302938-7303041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277442-7278208:-1:exon

Fgf9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fgf9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9 isoform X1
translation: MAPLGEVGSYFGVQDSVPFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDRVPELYKDILSQS
SIO_010081: Fgf9
subclass of: SO_0000673
so part of: Fgf9
location: complement(join(7277963..7278208,7302938..7303041,7312145..7312421))
location: region:7277963-7312421:-1
so has part: feature:7312145-7312421:-1:exon
so has part: feature:7302938-7303041:-1:exon
so has part: feature:7277963-7278208:-1:exon

XP_005355476.1
type: Protein
SIO_000068: ncbiprotein

position:7277963:-1
position: 7277963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7312421:-1
position: 7312421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7312145-7312421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7302938-7303041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277963-7278208:-1:exon

Fgf9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 79684
gene: Fgf9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9 isoform X2
translation: MDGPYIPGLSTYLSPNGVLSFFFKNAVTFKIGRLPRALETSDICAKMQGQGARVFRGQRTRTAGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDRVPELYKDILSQS
SIO_010081: Fgf9
subclass of: SO_0000673
so part of: Fgf9
location: complement(join(7277963..7278208,7302938..7303041,7309673..7309862))
location: region:7277963-7309862:-1
so has part: feature:7309673-7309862:-1:exon
so has part: feature:7302938-7303041:-1:exon
so has part: feature:7277963-7278208:-1:exon

XP_026639081.1
type: Protein
SIO_000068: ncbiprotein

position:7309862:-1
position: 7309862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7309673-7309862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7302938-7303041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277963-7278208:-1:exon

LOC101979482
type: Gene
subclass of: SO_0000704
RO_0002162: 79684
gene: LOC101979482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7363731..7364211)
location: region:7363731-7364211:-1
so has part: feature:7363731-7364211:-1:exon

101979482
type: Gene
SIO_000068: ncbigene