Sugiyamaella lignohabitans strain CBS 10342 chromosome A, complete sequence.
type: Entry
definition: Sugiyamaella lignohabitans strain CBS 10342 chromosome A, complete sequence.
sequence version: NC_031672.1
sequence date: 2016-10-25
sequence: sequence
division: CON
label: NC_031672.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA342695
dblink: SAMN04417247
keyword: RefSeq
source: Sugiyamaella lignohabitans
organism: Sugiyamaella lignohabitans
taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Trichomonascaceae; Sugiyamaella.
reference: 1
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP014501.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 5930846
topology: linear
so has quality: SO_0000987
location: 1..5930846
location: region:1-5930846:1
RO_0002162: 796027

NC_031672
type: RefSeq
SIO_000068: refseq

PRJNA342695
type: BioProject
SIO_000068: bioproject

SAMN04417247
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence and transcriptome regulation of the pentose utilising yeast Sugiyamaella lignohabitans
author: Bellasio, M.
author: Peymann, A.
author: Valli, M.
author: Sipitzky, M.
author: Graf, A.
author: Sauer, M.
author: Marx, H.
author: Mattanovich, D.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (25-OCT-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Peymann, A.
author: Graf, A.
journal: Submitted (18-FEB-2016) Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna 1190, Austria

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5930846:1
position: 5930846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5930846:1:source
so part of: sequence
organism: Sugiyamaella lignohabitans
mol type: genomic DNA
strain: CBS 10342
chromosome: A

796027
type: Taxonomy
SIO_000068: taxonomy

AWJ20_1
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ITR2
locus tag: AWJ20_1
so part of: sequence
location: <3059..>4897
location: region:3059-4897:1
so has part: feature:3059-4897:1:exon
subclass of: SO_0000010

30032752
type: Gene
SIO_000068: ncbigene

position:3059:1
position: 3059
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:4897:1
position: 4897
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059-4897:1:exon

AWJ20_1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ITR2
locus tag: AWJ20_1
product: myo-inositol transporter ITR2
transcript id: XM_018877845.1
SIO_010081: AWJ20_1
subclass of: SO_0000673
so part of: AWJ20_1
location: <3059..>4897
location: region:3059-4897:1
so has part: feature:3059-4897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3059-4897:1:exon

AWJ20_1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ITR2
locus tag: AWJ20_1
note: Myo-inositol transporter; member of the sugar transporter superfamily; expressed constitutively; ITR2 has a paralog, ITR1, that arose from the whole genome duplication; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0016020 - membrane [Evidence ISS] [PMID 2040626]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 16233524]; GO_function: GO:0005365 - myo-inositol transmembrane transporter activity [Evidence IMP,ISS] [PMID 2040626]; GO_function: GO:0022891 - substrate-specific transmembrane transporter activity [Evidence IEA]; GO_function: GO:0022857 - transmembrane transporter activity [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0015798 - myo-inositol transport [Evidence IMP] [PMID 2040626]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA,IEA]
codon start: 1
product: myo-inositol transporter ITR2
translation: MSGAKADAAHLEHYDKEHVEAFEKSFQNPLAGIDRETLLSRVRTFAKEKGLEDKIPQLEKGALVAQDPENFESLSDLDDDEKRILQQEVDHKWHHPKAMYWTIIVCSIGAAVQGWDQTGSNGANLSFPQEFGIDISDPANPDYEKNNWLVGMINSAPYMCAAIISCWLSDPINYLIGRRGTIFIAAIFCLLTPIGQAVTQNWHQLFVCRLLLGFGIGLKEVTAPVFAAENAPARIRGAMVMTWQMWTAFGILLGFSANLILYRVGKIAWRLQVGSAFIPAVPLLLGIFFCPESPRWLMKKDRYRQAYDSLCRLRFSEVQAARDLYYIHAQLVIEDEMIGNRTYITRFIELFTVGRLRRATLASWVVMIAQQMCGINIISFFSSSIFVEAGQSEKSALLASWGFGMVNFVFAWPAFYTIDTFGRRALLLFTFPNMAWTLLAAGMSFFIPEGSRARLGLVALFIFLFDAFYSPGEGPIPFTYSAEVFPLSHREMGMSWAVATNNFFAAILSLSYFRIQAAFTIQGAFGFYTGLNLVAFVMIFLWLPETKQRTLEELDYVFSIPTKDFMRYQLTESLPYWCKRWILWKRNIKLRPLYYFEYSDHHQGNSNTYEVA
SIO_010081: AWJ20_1
subclass of: SO_0000673
so part of: AWJ20_1
location: 3059..4897
location: region:3059-4897:1
so has part: feature:3059-4897:1:exon

XP_018734259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3059-4897:1:exon

AWJ20_2
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DUR3
locus tag: AWJ20_2
so part of: sequence
location: complement(<4990..>6651)
location: region:4990-6651:-1
so has part: feature:4990-6651:-1:exon
subclass of: SO_0000010

30033862
type: Gene
SIO_000068: ncbigene

position:4990:-1
position: 4990
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:6651:-1
position: 6651
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4990-6651:-1:exon

AWJ20_2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DUR3
locus tag: AWJ20_2
product: Dur3p
transcript id: XM_018878922.1
SIO_010081: AWJ20_2
subclass of: SO_0000673
so part of: AWJ20_2
location: complement(<4990..>6651)
location: region:4990-6651:-1
so has part: feature:4990-6651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4990-6651:-1:exon

AWJ20_2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DUR3
locus tag: AWJ20_2
note: Plasma membrane transporter for both urea and polyamines; expression is highly sensitive to nitrogen catabolite repression and induced by allophanate, the last intermediate of the allantoin degradative pathway; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 17218313]; GO_component: GO:0005886 - plasma membrane [Evidence IMP,ISS] [PMID 8335627]; GO_function: GO:0015489 - putrescine transmembrane transporter activity [Evidence IDA,IMP] [PMID 17218313]; GO_function: GO:0015606 - spermidine transmembrane transporter activity [Evidence IDA,IMP] [PMID 17218313]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_function: GO:0015204 - urea transmembrane transporter activity [Evidence IMP,ISS] [PMID 8335627]; GO_process: GO:0015847 - putrescine transport [Evidence IDA,IMP] [PMID 17218313]; GO_process: GO:0015848 - spermidine transport [Evidence IDA,IMP] [PMID 17218313]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA,IEA]; GO_process: GO:0043419 - urea catabolic process [Evidence IEP] [PMID 8335627]; GO_process: GO:0015840 - urea transport [Evidence IMP,ISS] [PMID 8335627]
codon start: 1
product: Dur3p
translation: MILSGSQLVIGITGMHYVAATIILPFGVILYTVVGGLKATFLTDYLHTTIALILIMFFTISVLVNEHIGGLSGLYDKLQATAHLHPIPGNYQGSLLTIKSPDAVMWGLTLKFGNLALVVMDTAFWQKSFASKPSATVPGYLLTAVSIFAIPLGLGTVVGLAGRVIESTPLSPTYPNTFSADAVNRGYVMPYVVKGLLGKGATGGILLLLFMALTSTVSSSLIAVSSILSYDGYRTYINPKASDKTMIRVSHLTVVLYGAFIAGYTILLNYVGANMTFYGYLQPVVSCPGIFPLIFAIFSDRQSKPAAVLSPILGLLCGVLTWVYTARSIYGGISMEDTSNPAPGLYGSIVSLFSPIFFSIIISILRPSKFDWNEYLKIKLLDDVDSQTVAISDNTSVDQERKNSVQENSKEAIYTEHSSIDDEEKTTGNRGLNKVANYFRTKDSDYTNLEDIYDQETIREMRRWLKIAAVALVVIVLVTFVAWPMPLYRNYVFTKPFFSGWVTVAIIWQFQAFFTVAVYPLWDGRKSIQLALRGIKQQFRFKRSQESHSTEEN
SIO_010081: AWJ20_2
subclass of: SO_0000673
so part of: AWJ20_2
location: complement(4990..6651)
location: region:4990-6651:-1
so has part: feature:4990-6651:-1:exon

XP_018734260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4990-6651:-1:exon

AWJ20_3
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_3
so part of: sequence
location: <8242..>9495
location: region:8242-9495:1
so has part: feature:8242-9495:1:exon
subclass of: SO_0000010

30034972
type: Gene
SIO_000068: ncbigene

position:8242:1
position: 8242
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:9495:1
position: 9495
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8242-9495:1:exon

AWJ20_3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_3
product: hypothetical protein
transcript id: XM_018879985.1
SIO_010081: AWJ20_3
subclass of: SO_0000673
so part of: AWJ20_3
location: <8242..>9495
location: region:8242-9495:1
so has part: feature:8242-9495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8242-9495:1:exon

AWJ20_3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_3
codon start: 1
product: hypothetical protein
translation: MVRPFKLIFDEFECLNLMITRPVMTDPAIKLPVVVWIHGGGNVAGTPYRTICDPSDWISQSIKMAKPVIFVSLQYRVHLFGALPYEGIGNFFLHDQRLGLQWVHEYIDYFGGDKNRVTLIGQSAGSCCVAAQASAKGAEQLFKRAALMSGSISSMPFMTLDQYGAKSKEIAEAAGLETVEELSNLPWKQLVDAGVKCNFNVAYAVDDGKFLGYGQLNRAHTLVESIILSDCIEDGYFFTDYFTQGIGDLFTEIKQIACDEKVSQQLLAAYNIVEDESIIKRIGDLLTDAIFCQGNENMDIEVRKSGATKVFRQFFDANNPFNPTLGNNHMVEVLYLFNAYNVAAKYQPITRDVQSRWINFFYGHDPWSSECCLRVSDTGVEEISYNQRGQYRRIKNFDLLSSLDPKSMHRLTGDGWD
SIO_010081: AWJ20_3
subclass of: SO_0000673
so part of: AWJ20_3
location: 8242..9495
location: region:8242-9495:1
so has part: feature:8242-9495:1:exon

XP_018734261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8242-9495:1:exon

AWJ20_4
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RNA15
locus tag: AWJ20_4
so part of: sequence
location: complement(<9623..>10366)
location: region:9623-10366:-1
so has part: feature:9623-10366:-1:exon
subclass of: SO_0000010

30036082
type: Gene
SIO_000068: ncbigene

position:9623:-1
position: 9623
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:10366:-1
position: 10366
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9623-10366:-1:exon

AWJ20_4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RNA15
locus tag: AWJ20_4
product: Rna15p
transcript id: XM_018881044.1
SIO_010081: AWJ20_4
subclass of: SO_0000673
so part of: AWJ20_4
location: complement(<9623..>10366)
location: region:9623-10366:-1
so has part: feature:9623-10366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9623-10366:-1:exon

AWJ20_4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RNA15
locus tag: AWJ20_4
inference: similar to AA sequence:KEGG_Orthology:K14407
note: Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping; GO_component: GO:0005849 - mRNA cleavage factor complex [Evidence IPI] [PMID 11344258]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 17684230]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0046982 - protein heterodimerization activity [Evidence IPI] [PMID 15215336]; GO_process: GO:0006379 - mRNA cleavage [Evidence IDA] [PMID 11344258]; GO_process: GO:0006378 - mRNA polyadenylation [Evidence IDA] [PMID 11344258]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]
codon start: 1
product: Rna15p
translation: MDGPTKVVYVGSIPYDHTEEQMLDIFKSVGPVANIRLVFDKDTGKSKGFGFVEYHDEETAASAVRNLNNYSIGPRALKVAFSHETPVGGLFKDSKISSDLPPLPQGPIPARGVSGNELISQTIDGFSQERKVQVIVDMKTLISNNPTLATDLLKAAPQLSFAVVQTLSALQLITPQQITNLTPDSNPASESHAPAPAPAPVAVDPQQAALIKQVVQLTDDQINALPADQKETILTLKAKVKSGEIKI
SIO_010081: AWJ20_4
subclass of: SO_0000673
so part of: AWJ20_4
location: complement(9623..10366)
location: region:9623-10366:-1
so has part: feature:9623-10366:-1:exon

XP_018734262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9623-10366:-1:exon

AWJ20_5
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DST1
locus tag: AWJ20_5
so part of: sequence
location: <11423..>11992
location: region:11423-11992:1
so has part: feature:11423-11992:1:exon
subclass of: SO_0000010

30037192
type: Gene
SIO_000068: ncbigene

position:11423:1
position: 11423
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:11992:1
position: 11992
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11423-11992:1:exon

AWJ20_5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DST1
locus tag: AWJ20_5
product: Dst1p
transcript id: XM_018882109.1
SIO_010081: AWJ20_5
subclass of: SO_0000673
so part of: AWJ20_5
location: <11423..>11992
location: region:11423-11992:1
so has part: feature:11423-11992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11423-11992:1:exon

AWJ20_5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DST1
locus tag: AWJ20_5
inference: similar to AA sequence:KEGG_Orthology:K03145
note: General transcription elongation factor TFIIS; enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites; maintains RNAPII elongation activity on ribosomal protein genes during conditions of transcriptional stress; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 9334234]; GO_function: GO:0003677 - DNA binding [Evidence IEA,IEA]; GO_function: GO:0000993 - RNA polymerase II core binding [Evidence IPI] [PMID 6985606]; GO_function: GO:0000993 - RNA polymerase II core binding [Evidence IPI] [PMID 8876173]; GO_function: GO:0001012 - RNA polymerase II regulatory region DNA binding [Evidence IDA] [PMID 15767671]; GO_function: GO:0001139 - core RNA polymerase II recruiting transcription factor activity [Evidence IMP] [PMID 15767671]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006379 - mRNA cleavage [Evidence IDA] [PMID 12692127]; GO_process: GO:0006379 - mRNA cleavage [Evidence IMP] [PMID 9712888]; GO_process: GO:0001193 - maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter [Evidence IMP] [PMID 14531857]; GO_process: GO:0001193 - maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter [Evidence IMP] [PMID 16492753]; GO_process: GO:0001193 - maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter [Evidence IGI] [PMID 17535246]; GO_process: GO:0045899 - positive regulation of RNA polymerase II transcriptional preinitiation complex assembly [Evidence IDA,IMP] [PMID 17913884]; GO_process: GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter [Evide…
codon start: 1
product: Dst1p
translation: MTERFSNHGKPRNAKNDGVRTDLYSDKVRNSCIDLCYTALALDSVAAPADILGHAKAIEAVVFENNKGNTAAPAYRNKMRSLYMNLKDKANPMLRKRVVSGEISAQRLATMTPQEMASEELKEEIQRLDKENLFKAQGATEKRATTDRFTCGKCKQKKVSYYQMQTRSADEPLTTFCTCENCGNRWKFS
SIO_010081: AWJ20_5
subclass of: SO_0000673
so part of: AWJ20_5
location: 11423..11992
location: region:11423-11992:1
so has part: feature:11423-11992:1:exon

XP_018734263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11423-11992:1:exon

AWJ20_6
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_6
so part of: sequence
location: complement(<14738..>14832)
location: region:14738-14832:-1
so has part: feature:14738-14832:-1:exon
subclass of: SO_0000663

30037649
type: Gene
SIO_000068: ncbigene

position:14738:-1
position: 14738
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:14832:-1
position: 14832
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14738-14832:-1:exon

AWJ20_6
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_6
product: tRNA-Lys
SIO_010081: AWJ20_6
subclass of: SO_0000673
so part of: AWJ20_6
location: complement(<14738..>14832)
location: region:14738-14832:-1
so has part: feature:14738-14832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14738-14832:-1:exon

AWJ20_7
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PEX14
locus tag: AWJ20_7
so part of: sequence
location: complement(<16235..>17284)
location: region:16235-17284:-1
so has part: feature:16235-17284:-1:exon
subclass of: SO_0000010

30037760
type: Gene
SIO_000068: ncbigene

position:16235:-1
position: 16235
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:17284:-1
position: 17284
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16235-17284:-1:exon

AWJ20_7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PEX14
locus tag: AWJ20_7
product: Pex14p
transcript id: XM_018882654.1
SIO_010081: AWJ20_7
subclass of: SO_0000673
so part of: AWJ20_7
location: complement(<16235..>17284)
location: region:16235-17284:-1
so has part: feature:16235-17284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16235-17284:-1:exon

AWJ20_7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PEX14
locus tag: AWJ20_7
inference: similar to AA sequence:KEGG_Orthology:K13343
note: Central component of the peroxisomal protein import machinery; peroxisomal membrane peroxin; interacts with both PTS1 (Pex5p) and PTS2 (Pex7p), peroxisomal matrix protein signal recognition factors and membrane receptor Pex13p; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IEA,IEA]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IDA] [PMID 9094717]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IDA] [PMID 9312008]; GO_component: GO:0005777 - peroxisome [Evidence IEA]; GO_function: GO:0030674 - protein binding, bridging [Evidence IPI] [PMID 9094717]; GO_function: GO:0030674 - protein binding, bridging [Evidence IPI] [PMID 9312008]; GO_process: GO:0016560 - protein import into peroxisome matrix, docking [Evidence IEA]; GO_process: GO:0016560 - protein import into peroxisome matrix, docking [Evidence IMP,IPI] [PMID 16107331]; GO_process: GO:0016560 - protein import into peroxisome matrix, docking [Evidence IPI] [PMID 9094717]; GO_process: GO:0016560 - protein import into peroxisome matrix, docking [Evidence IPI] [PMID 9312008]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Pex14p
translation: MREELVRSAVSFLNDPQVADATLAKRIEFLESKGLTKEEVEEALTQATNGNSSPKSPSSLASVPITGVNSTTVKTAYLNQPHIPPLSLPPPVPKRDWKDYFVMATVSAGVAYGLYEVTRRYVLPLILPPTPSSLESDKEALEAEFTRAESLLEQLHKDTEEIKEAELQRKEQFTTVLQEAQDAIETVKGQSQQIEADMKLIKTQVDTIKDTLPKSLEKNRDQQDKALLEIQEELKSLKQLITNRLKSSSLPASLPPASSVPSTIPKFAASSVSSTSGPSPSSTSTNEGSTSLPVLGTNSSIVSPFSKPSVPYSEQTSPATSSTTPTPKPGLPAWQVAAASKYSENEAAS
SIO_010081: AWJ20_7
subclass of: SO_0000673
so part of: AWJ20_7
location: complement(16235..17284)
location: region:16235-17284:-1
so has part: feature:16235-17284:-1:exon

XP_018734264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16235-17284:-1:exon

AWJ20_8
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: lys7
locus tag: AWJ20_8
so part of: sequence
location: <19673..>20566
location: region:19673-20566:1
so has part: feature:19673-20566:1:exon
subclass of: SO_0000010

30037871
type: Gene
SIO_000068: ncbigene

position:19673:1
position: 19673
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:20566:1
position: 20566
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19673-20566:1:exon

AWJ20_8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: lys7
locus tag: AWJ20_8
product: alpha-aminoadipate reductase phosphopantetheinyl transferase Lys7
transcript id: XM_018882764.1
SIO_010081: AWJ20_8
subclass of: SO_0000673
so part of: AWJ20_8
location: <19673..>20566
location: region:19673-20566:1
so has part: feature:19673-20566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19673-20566:1:exon

AWJ20_8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: lys7
locus tag: AWJ20_8
codon start: 1
product: alpha-aminoadipate reductase phosphopantetheinyl transferase Lys7
translation: MRVTKLKFIDDAKMSLASHLLQRHLVWKFVQEKDKGTKLSFLKDIRFHSGKFGRPYFRSSPESDYVIDFNISTVSGRVIIAHIVRSKNCSERLEKSIQAQTDCPVLGIDLTDPPSLQSAEWMDEFAPMVSTPDELLAIKAASSINIGISDIDRTLLSGISLAIRWAIKESYIKGIGAGLVGAVDISQVEVDKESNDSIDKLVIDEYLKQARSAASHKNGGDNFSVSKSNNITAKYFSAQKVIVASSEQADWRVKIFTFDGIIAAIMLHQDICVSEEPELNLNRLALQTILDDIATSC
SIO_010081: AWJ20_8
subclass of: SO_0000673
so part of: AWJ20_8
location: 19673..20566
location: region:19673-20566:1
so has part: feature:19673-20566:1:exon

XP_018734265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19673-20566:1:exon

AWJ20_9
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_9
so part of: sequence
location: <21028..>22089
location: region:21028-22089:1
so has part: feature:21028-22089:1:exon
subclass of: SO_0000010

30037982
type: Gene
SIO_000068: ncbigene

position:21028:1
position: 21028
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:22089:1
position: 22089
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21028-22089:1:exon

AWJ20_9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_9
product: hypothetical protein
transcript id: XM_018882870.1
SIO_010081: AWJ20_9
subclass of: SO_0000673
so part of: AWJ20_9
location: <21028..>22089
location: region:21028-22089:1
so has part: feature:21028-22089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21028-22089:1:exon

AWJ20_9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_9
inference: similar to AA sequence:KEGG_Orthology:K15118
codon start: 1
product: hypothetical protein
translation: MSDSTPQPQQITAIKTPLPSKSCSKPLSISKDDSSSTEPDTKPKDKPLRKASPTSHLYAGFASGITSSILLQPLDLLKTRVQQSGEATITSAFKELTSFRALWRGTVPSALRMSIGSGLYFTTLNSTRAYLQQRNYNKLLQDHDKDTTSKAGNAGLGDSSSLPKLGMYENLASGAFVRGVVGFMTMPITVIKVRYESSMYNYTSMWNAVQSVYRNHGVRGYFYGYGATFARDAPYAGLYVLFYEKSKEIVNNLFPSTERRSTVTAAIMNSSSAFFSAGLATTITSPFDTIKTRVQLNPVKYKGFFQAAKIMVKEDGFIRFFDGLSLRLSRKALSAGISWCIYEEIVRRLQQPL
SIO_010081: AWJ20_9
subclass of: SO_0000673
so part of: AWJ20_9
location: 21028..22089
location: region:21028-22089:1
so has part: feature:21028-22089:1:exon

XP_018734266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21028-22089:1:exon

AWJ20_10
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PRX1
locus tag: AWJ20_10
so part of: sequence
location: complement(<22567..>23658)
location: region:22567-23658:-1
so has part: feature:22567-23658:-1:exon
subclass of: SO_0000010

30032753
type: Gene
SIO_000068: ncbigene

position:22567:-1
position: 22567
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:23658:-1
position: 23658
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22567-23658:-1:exon

AWJ20_10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PRX1
locus tag: AWJ20_10
product: Prx1p
transcript id: XM_018877846.1
SIO_010081: AWJ20_10
subclass of: SO_0000673
so part of: AWJ20_10
location: complement(join(<22567..23382,23440..>23658))
location: region:22567-23658:-1
so has part: feature:23440-23658:-1:exon
so has part: feature:22567-23382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23440-23658:-1:exon

position:23440:-1
position: 23440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22567-23382:-1:exon

position:23382:-1
position: 23382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AWJ20_10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PRX1
locus tag: AWJ20_10
inference: similar to AA sequence:KEGG_Orthology:K03386
note: Mitochondrial peroxiredoxin with thioredoxin peroxidase activity; has a role in reduction of hydroperoxides; reactivation requires Trr2p and glutathione; induced during respiratory growth and oxidative stress; phosphorylated; protein abundance increases in response to DNA replication stress; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA,ISS] [PMID 10681558]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 10821871]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0016209 - antioxidant activity [Evidence IEA,IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0004601 - peroxidase activity [Evidence IEA]; GO_function: GO:0051920 - peroxiredoxin activity [Evidence IEA,IEA]; GO_function: GO:0008379 - thioredoxin peroxidase activity [Evidence IDA,IMP,ISS] [PMID 10681558]; GO_function: GO:0008379 - thioredoxin peroxidase activity [Evidence IDA] [PMID 10821871]; GO_process: GO:0045454 - cell redox homeostasis [Evidence IDA,IMP] [PMID 10681558]; GO_process: GO:0034599 - cellular response to oxidative stress [Evidence IGI] [PMID 15051715]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0046686 - response to cadmium ion [Evidence IMP] [PMID 19332553]
codon start: 1
product: Prx1p
translation: MSTGNHAMARAHAYKQEDICLTLANSFFNSIDPEMSVLTLARKTLLTSARRSRSGARIVVPAVRHFAFNAADQPRIRIGSTAPNFKALTTDGEIDFHEFVGDSWTILFSHPADFTPVCTTELGAFAALQEEFTKRNAKLIGLSADGLESHGEWVKDIEETSTSGKKFDFPIIADKDRNVAFLYDMVDEEGFKNINSGMAMTIRNVFIIDPKKKVRLFLVYPASTGRNTAEVLRVLDALQLADGQGIATPVDWVPGKDVIVPVSVSTSDAAKKFGEVREVKPYLRFVKHNVKSSVLSLFGGPSYSSSSNYTTFALIAAGVGAALVGSEGLSKDSRVADLENVVGK
SIO_010081: AWJ20_10
subclass of: SO_0000673
so part of: AWJ20_10
location: complement(join(22567..23382,23440..23658))
location: region:22567-23658:-1
so has part: feature:23440-23658:-1:exon
so has part: feature:22567-23382:-1:exon

XP_018734267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23440-23658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22567-23382:-1:exon

AWJ20_11
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_11
so part of: sequence
location: complement(<23784..>24494)
location: region:23784-24494:-1
so has part: feature:23784-24494:-1:exon
subclass of: SO_0000010

30032864
type: Gene
SIO_000068: ncbigene

position:23784:-1
position: 23784
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:24494:-1
position: 24494
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23784-24494:-1:exon

AWJ20_11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_11
product: chitin synthase 6
transcript id: XM_018877953.1
SIO_010081: AWJ20_11
subclass of: SO_0000673
so part of: AWJ20_11
location: complement(<23784..>24494)
location: region:23784-24494:-1
so has part: feature:23784-24494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23784-24494:-1:exon

AWJ20_11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_11
note: Fungal Genetics Stock Center 12450; Fungal Genetics Stock Center 12449
codon start: 1
product: chitin synthase 6
translation: MDNFSWGNTRIVVEENAGKRKLKVDPNEVFDPRSVPLESWQSYANRNNLPGEERRIVFDDRKGRVINNVEYTDYGYDMQDLSARKSVMFDAATETRSTRPFSQFSMDINRVGTPTTAVGGEARSLRLSLAPTELLDDQAQFDEHREVQVRETIKTVLRGADLDTMTKRQLRQKVEDILGMDFVGNKVAAVDRLIDEELESMENEESEIPEHPPADLISTAPENEVVKDGPPSPNIP
SIO_010081: AWJ20_11
subclass of: SO_0000673
so part of: AWJ20_11
location: complement(23784..24494)
location: region:23784-24494:-1
so has part: feature:23784-24494:-1:exon

XP_018734268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23784-24494:-1:exon

AWJ20_12
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CHS3
locus tag: AWJ20_12
so part of: sequence
location: complement(<24844..>28581)
location: region:24844-28581:-1
so has part: feature:24844-28581:-1:exon
subclass of: SO_0000010

30032975
type: Gene
SIO_000068: ncbigene

position:24844:-1
position: 24844
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:28581:-1
position: 28581
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24844-28581:-1:exon

AWJ20_12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CHS3
locus tag: AWJ20_12
product: chitin synthase CHS3
transcript id: XM_018878056.1
SIO_010081: AWJ20_12
subclass of: SO_0000673
so part of: AWJ20_12
location: complement(<24844..>28581)
location: region:24844-28581:-1
so has part: feature:24844-28581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24844-28581:-1:exon

AWJ20_12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CHS3
locus tag: AWJ20_12
inference: similar to AA sequence:KEGG_Orthology:K00698
note: Chitin synthase III; catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan; contains overlapping di-leucine and di-acidic signals that mediate, respectively, intracellular trafficking by AP-1 and trafficking to plasma membrane by exomer complex; requires AP-3 complex for its intracellular retention; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 15470103]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 8909536]; GO_component: GO:0045009 - chitosome [Evidence IDA] [PMID 8970154]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 9008706]; GO_component: GO:0000131 - incipient cellular bud site [Evidence IDA] [PMID 15470103]; GO_component: GO:0000131 - incipient cellular bud site [Evidence IDA] [PMID 9008706]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005628 - prospore membrane [Evidence IDA] [PMID 15755916]; GO_function: GO:0004100 - chitin synthase activity [Evidence IEA]; GO_function: GO:0004100 - chitin synthase activity [Evidence IMP] [PMID 9760183]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA]; GO_process: GO:0030476 - ascospore wall assembly [Evidence IMP] [PMID 1293886]; GO_process: GO:0034221 - fungal-type cell wall chitin biosynthetic process [Evidence TAS] [PMID 7565410]
codon start: 1
product: chitin synthase CHS3
translation: MTALTPQNLSTRFHDGLGVKFELNARGDIVSTRILVPENPFSSLDQLLNLPSKESNRVFDVFYHLLLNESSETRGTYLSLKSSPDQYDLLKKSGTYKLPDWVNFSDDYALAKDWSDALRQCGFKASTLRGVLSTLSGILLLGNRDPNDIAEGASLIGIDPKTQSRYAPRELIVSSYIALVKNVVSELNAFLAKLDKPNDNNENEVVSVVTIAECADDHRKDVLRNVFDNSIGINQELFDDGLSIPKSPVAVTRAIQKMSTQTTNNSVTRTVAMIPNFEDILDSSLSYLSSRKPSISPDEEESAFEIADLIARNRIWVALNLTSCGDAAGLAADRWSSSVVSAQVREFFVTEWAQKRRQIDFTADFEPYEFIERYSALLPPNITFSDLEHWAIHDKRWGHNDFAKGSKRIWISESVWRDLELGLDGLSGNSPYVNDSTDTFGQSYPSDEYVASNPFDQTERLLPMQNVDHGYNNGSHDMTGYNKELNRAPQYQQTPGGDMDPSDDELDDADFDNDYGLKERGGDIEHNTAGRITKIEKMTTERRVWVFFVWLFTFWIPSPFLKYIMRMKRPEIRMAWREKLLLCFIIFLINAGIIFYMIFLGKFVCSDYDKVWNSKEIATHQGENDFYVSIHGNVYDLTKFYKIQHSDSSIQTTPSRMLEFAGQDLSDYFPPPLTVACPALVTDVSISLSYNETKSPISSGLHNSGAYLVPANNTALHKYTWYNSVFQPKIKNYYKGRVVAKRNDLLKTAQANNQYTFILNNQIYDVTNYFLTTAIYPDNDPVTKPWNFFSDTVVNMFVNGQGQDITEQFNGDQLDALTRQNTLQCLNNAFRAGEVDFRDSVRCQVANVILLVFAGILTSVTLVKFLASIRFGSKRVPSPQDKFVLCQIPIYTESETDFRLAVDSLTNLKYDNRRKLLLLVCDGMIVGAGNDKPTPNIVLDMLGVDERVNPPALAYESIGEGANQLNFAKVYSGLYENEGNVVPFIVVVKVGRPQETSKPGNRGKRDSQIMIMRFLNKVHYQKPMSPLELELFHHMTNIIGVDPELYEYIFMVDADTSVAEDSLTRLVSACANDSRIAGICGETGLQNEEKSWTTMIQVYEYFISHHLTKQFESLFGSVTCLPGCFSLYRLKTAKKYAPLFISNEVIRDYSIINVDTLHKKNLFSLGEDRYLTTLMSKYFPKMKYSFIPDAYCQTAAPEDFSVLLSQRRRWINSTVHNLMELLRLNTMCGFGFFSMRGVVFIDLIG
SIO_010081: AWJ20_12
subclass of: SO_0000673
so part of: AWJ20_12
location: complement(24844..28581)
location: region:24844-28581:-1
so has part: feature:24844-28581:-1:exon

XP_018734269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24844-28581:-1:exon

AWJ20_13
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CHS3
locus tag: AWJ20_13
so part of: sequence
location: <32456..>37627
location: region:32456-37627:1
so has part: feature:32456-37627:1:exon
subclass of: SO_0000010

30033086
type: Gene
SIO_000068: ncbigene

position:32456:1
position: 32456
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:37627:1
position: 37627
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32456-37627:1:exon

AWJ20_13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CHS3
locus tag: AWJ20_13
product: chitin synthase CHS3
transcript id: XM_018878167.1
SIO_010081: AWJ20_13
subclass of: SO_0000673
so part of: AWJ20_13
location: <32456..>37627
location: region:32456-37627:1
so has part: feature:32456-37627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32456-37627:1:exon

AWJ20_13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CHS3
locus tag: AWJ20_13
inference: similar to AA sequence:KEGG_Orthology:K00698
note: Chitin synthase III; catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan; contains overlapping di-leucine and di-acidic signals that mediate, respectively, intracellular trafficking by AP-1 and trafficking to plasma membrane by exomer complex; requires AP-3 complex for its intracellular retention; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 15470103]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 8909536]; GO_component: GO:0045009 - chitosome [Evidence IDA] [PMID 8970154]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 9008706]; GO_component: GO:0000131 - incipient cellular bud site [Evidence IDA] [PMID 15470103]; GO_component: GO:0000131 - incipient cellular bud site [Evidence IDA] [PMID 9008706]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005628 - prospore membrane [Evidence IDA] [PMID 15755916]; GO_function: GO:0004100 - chitin synthase activity [Evidence IEA]; GO_function: GO:0004100 - chitin synthase activity [Evidence IMP] [PMID 9760183]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA]; GO_process: GO:0030476 - ascospore wall assembly [Evidence IMP] [PMID 1293886]; GO_process: GO:0034221 - fungal-type cell wall chitin biosynthetic process [Evidence TAS] [PMID 7565410]
codon start: 1
product: chitin synthase CHS3
translation: MTLFCLRRLGLCPRPRGSSRYARVDLSTSSKFGEFVPFSATNLVQHHLLPLSIYGKLTGSALSNNPLSTKIKNADFVFQAFTTTKTAQSLASSRAGNVLEFQYGTDATLIGASILDYRLERSRITKVPTGERNYHVFYSLMAGISDTEREHLALSDLNTARYRYLGHHSQLRVGIDDRQRFKQLRSSLKSLEFTRADIANICQILAAILHIGQLMFRSTGADGMSSAAIEVTNTDVLNCIAGFLGVRPHILESTLSYKTVKIQKDRVTLVLDQLGARENADELARTLYTLLFSWIMEKINSRISQAESRSGSTAGFENEIESLVDNTITVVDFPGFTISSSVPTLDKLLHNSANEMFYNFMLKSYFEKPLEKFDSEEVAVPAAEYFDNSDTVRMLFRPTMGLLSVIDDYSRREKDDSALMHTLRQRYDKSGIIDTVTARRSFSIRHFAGEVEYEVDNLIGSNTESISGDIISLFTSSSSSDFLKSIFGSSAVVDSTFGTEVVQAHLSSKPLRAPSVVRRNTTSGANTKQDAEKKINRKNKQLNGCGQFISAIDRLLDSFEGANPYFVICLKPNDHRLSNSFDARCVRQQIKAFGLPEIARAVKQTDFRVFLTFNEFITAMSASEGHNSNLLQTADGVTEREKAIEMMHSLSWPERDARYGFTGIFLSEHAWLQIVDPKMSFAQSAAQRYIDSGADLTPAARGYADNDAFYYDPDSKSIAGATIGGDLFKYNDGRSINNQAYIRTKEMGESEQDQTDQYAVTGARKRWMFLVWLWTWWIPDWFIKILGRIPRKDIRTAWREKFAINLMIWAACAFCVVFLIGFPILICPLQNVMSTEELSQYSSKLNPGKTLTQVRGVVFDLTTFAPSHYPQVVSTDDILNYGGRDSSPIFPVPVSGVCRGTNGSISEYVVYGQTSNFSDANAVYHDFRYFTGDYRPDWYLQQMQFLNANFRKAYIGMTPSVLSKTVSQHKNVMASLNGYVYDLSSYTAGEVTTKAPHGKKVPADVDTHFMDSRLVNLFEQYSGTDITKRFNELDMSEETRVEMNRCLRNLFMVGKLDTRDSVRCVFARYFLLAITIFVVLIILVKFLAALQFGKSHIPDELDKFFICQVPAYTEDEESLRRAIDSLAATQYDDKRKLLIVVCDGMIVGAGNERPTPRIVLDILGCPPDVDPPALSFESLGEGAKQHNMGKVYSGLYEVHGHIVPYLVLVKVGKPTEINRPGNRGKRDSQMVLMRFLNRVHYNLPMSPLELELYHQIQNVIGVNPAYYEYLLQVDADTMVGPTSASQFVSSMVNDRKLQAICGETALSNAKSSIVTMVQVYEYYISHNLAKAFESLFGSVTCLPGCFSMYRIYDNETGKPLFVSHPVVKGYAENRVDTLHMKNLLHLGEDRYLTTLLLKYNPRYKTKFTRHAEAWTVAPDTWSVFLSQRRRWINSTVHNLIELVPMGNMCGFCCFSMRFIVVVDLFSTIIQPVTVAYLAYLVYLLVTKTDGVPITSIAMLGAIYGLQAFIFLLRRRWEMIGWMLIYILAIPIFSLALPLYAFWHMDDFSWGNTRVVNGEKAGTKVVLSDEGTFDPSEIPLRRWQEYQAEAWQTSEARNAPDAMSIARSQYSASQYSVPAPPAGGNVSIAPTERSSGGTPAGSAAATPSIRGEEHELHSLPPQLPILPSDGEITNAVREILRTADLMMVTKKSIRLQLEQQFGVKLASRRDYINYVTEAILTGEL
SIO_010081: AWJ20_13
subclass of: SO_0000673
so part of: AWJ20_13
location: 32456..37627
location: region:32456-37627:1
so has part: feature:32456-37627:1:exon

XP_018734270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32456-37627:1:exon

AWJ20_14
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RPN1
locus tag: AWJ20_14
so part of: sequence
location: complement(<37767..>40277)
location: region:37767-40277:-1
so has part: feature:37767-40277:-1:exon
subclass of: SO_0000010

30033197
type: Gene
SIO_000068: ncbigene

position:37767:-1
position: 37767
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:40277:-1
position: 40277
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37767-40277:-1:exon

AWJ20_14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RPN1
locus tag: AWJ20_14
product: proteasome regulatory particle base subunit RPN1
transcript id: XM_018878275.1
SIO_010081: AWJ20_14
subclass of: SO_0000673
so part of: AWJ20_14
location: complement(<37767..>40277)
location: region:37767-40277:-1
so has part: feature:37767-40277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37767-40277:-1:exon

AWJ20_14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RPN1
locus tag: AWJ20_14
inference: similar to AA sequence:KEGG_Orthology:K03028
note: Non-ATPase base subunit of the 19S RP of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein-protein interactions; RP is the acronym for regulatory particle; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 11914276]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 15210724]; GO_component: GO:0000502 - proteasome complex [Evidence IEA,IEA]; GO_component: GO:0008540 - proteasome regulatory particle, base subcomplex [Evidence IDA] [PMID 9741626]; GO_component: GO:0034515 - proteasome storage granule [Evidence IDA] [PMID 18504300]; GO_function: GO:0004175 - endopeptidase activity [Evidence TAS] [PMID 8982460]; GO_function: GO:0004175 - endopeptidase activity [Evidence TAS] [PMID 9697412]; GO_function: GO:0030234 - enzyme regulator activity [Evidence IEA]; GO_function: GO:0030674 - protein binding, bridging [Evidence IPI] [PMID 12198498]; GO_function: GO:0030674 - protein binding, bridging [Evidence IPI] [PMID 12200120]; GO_process: GO:0050790 - regulation of catalytic activity [Evidence IEA]; GO_process: GO:0042176 - regulation of protein catabolic process [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence TAS] [PMID 8982460]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence TAS] [PMID 9697412]
codon start: 1
product: proteasome regulatory particle base subunit RPN1
translation: MTAVPKPLKFLRPHYPALSELYDKWPKGELQNQLADVLSVLGMTYSGEGKLESLKYRLLSGIDDVGSWGHEYVRHLALEIGEEFGTRSEKEESTDDLLDLSLKIVPFFLKHNAEADAVDLLLEIEAIDRLTEFVDANTFGRVCLYMVSCVPLLAPPDDLNFLHTAYEIYLRHGQLTQALALAIRIDNEDLIRSVFNATTDELVQQQLAFIVARQQYWFQVDNEEVQKCLSNVSLSEHFLYLGKELNLLDPKTPEDIYKSHLEHSTLGTSTGILDSAKQNLAAAFVNAFVNCGYGADKLLMNDEESNSWIYKTKGPGMASTTASIGSLFQWNFDKGLQQLDKYTYSSEEQIKAGSLLGIGIVNAGVHDESDPAFALLSEYVDNPSVHLRASAIVGLGLSYAGSRREDLAELLLPIVTDSGLTMQLSSLAALSLGHIFVGSANGDISSSILQTLLERDHIQLSDKWTRFMALGLALLYMGKYEDTEEVLETLKAIDHPISQIIEVLLTICSYSGTGNVLQIQKLLQDCTTRPEPEKKDSDAAEQPPAEGQTEEQQQQQADKEKEEAEEKAKQESVFQGYSVLGLAVIAMGEEIGQDMVLRHFGHLMHYGDAHIRRAVPLAMGLVSASNPQMKVFDTLSRYSHDSDLDVAVNSIWAMGLVGAGTNNARLAQLLRQLAMYYSRDPDSLFMVRIAQGLIHLGKGTLTVNPFNTDRQILSRVSLAGLLTVSVALLDPKSFILSSAHSLLYFVTTAVRPRMLITLDEKLEPIKVNVRVGQAVDVVGQAGRPKTITGWVTHSTPVLLGYGERAELEDDEYISLASSLEGVVILKKNHDRMEVDG
SIO_010081: AWJ20_14
subclass of: SO_0000673
so part of: AWJ20_14
location: complement(37767..40277)
location: region:37767-40277:-1
so has part: feature:37767-40277:-1:exon

XP_018734271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37767-40277:-1:exon

AWJ20_15
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_15
so part of: sequence
location: complement(<40500..>40793)
location: region:40500-40793:-1
so has part: feature:40500-40793:-1:exon
subclass of: SO_0000010

30033308
type: Gene
SIO_000068: ncbigene

position:40500:-1
position: 40500
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:40793:-1
position: 40793
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40500-40793:-1:exon

AWJ20_15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_15
product: 26S proteasome regulatory subunit rpn1
transcript id: XM_018878385.1
SIO_010081: AWJ20_15
subclass of: SO_0000673
so part of: AWJ20_15
location: complement(<40500..>40793)
location: region:40500-40793:-1
so has part: feature:40500-40793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40500-40793:-1:exon

AWJ20_15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_15
note: Fungal Genetics Stock Center 13879
codon start: 1
product: 26S proteasome regulatory subunit rpn1
translation: MAPSKDTTTPNNNDGSEPTDSTQPQQTAAGSSKDAKDVKDVKGKKKDGKKKKGEEDVEELSEEDQKLKGELEMLVERLKVCFWTGFAMTRDSTHISS
SIO_010081: AWJ20_15
subclass of: SO_0000673
so part of: AWJ20_15
location: complement(40500..40793)
location: region:40500-40793:-1
so has part: feature:40500-40793:-1:exon

XP_018734272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40500-40793:-1:exon

AWJ20_16
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DAP2
locus tag: AWJ20_16
so part of: sequence
location: complement(<42237..>44834)
location: region:42237-44834:-1
so has part: feature:42237-44834:-1:exon
subclass of: SO_0000010

30033419
type: Gene
SIO_000068: ncbigene

position:42237:-1
position: 42237
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:44834:-1
position: 44834
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42237-44834:-1:exon

AWJ20_16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DAP2
locus tag: AWJ20_16
product: Dap2p
transcript id: XM_018878492.1
SIO_010081: AWJ20_16
subclass of: SO_0000673
so part of: AWJ20_16
location: complement(<42237..>44834)
location: region:42237-44834:-1
so has part: feature:42237-44834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42237-44834:-1:exon

AWJ20_16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DAP2
locus tag: AWJ20_16
inference: similar to AA sequence:KEGG_Orthology:K01282
note: Dipeptidyl aminopeptidase; synthesized as a glycosylated precursor; localizes to the vacuolar membrane; similar to Ste13p; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IDA] [PMID 2647766]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005774 - vacuolar membrane [Evidence IEA]; GO_component: GO:0005773 - vacuole [Evidence IEA]; GO_function: GO:0004177 - aminopeptidase activity [Evidence IEA]; GO_function: GO:0008239 - dipeptidyl-peptidase activity [Evidence IDA] [PMID 2647766]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO_function: GO:0008236 - serine-type peptidase activity [Evidence IEA,IEA]; GO_process: GO:0016485 - protein processing [Evidence ISS] [PMID 3305478]; GO_process: GO:0006508 - proteolysis [Evidence IEA,IEA]
codon start: 1
product: Dap2p
translation: MVARSRDYEPLRVDDQGEIDSPRSSTSSILEKFTGHGRSESDAERQWRGESEFDYGSEPRPKKVKRSRLIVLAVLSVITLVLFVSTSVSYIKSSPSGSFRQTTFSGTVDIATGKKLLTLEELRTGAYAANHQSISWIEPIPSAKENLGDFVLQKDNKFLLSHWANRSDEKLIVENVVEIEGTPRAINSVTLNRDQTKAILSTDRKKNWRHSSFSLFWVLDLETREITPVNTKDSSRPIALAEWSPRGDRIAFVADNNIFLRYVGGEDDGTVKQITTDGGDEIFYGRPDWVYEEEVFSGSKALWWSLNGEYLAFLRTNDTEVPEFPIPYFVQHGDDGSDPYPELVNLKYPKPGFPNPIVNILFLEISTEEYYAVPVEENPAIDNLITEVLWTDNSKVILRVTSRESDILKISVVDAKTRTGKIVRSSDETGDDGGWFEVSQDTVFIPADPENGRPEEGYIDTIFVDGYNHLAFFSPVDSSEPKTILTRGEWEVTDVSSVDLKNNKVYFLSTKKSAVERQLYSVNLDGTGLTSVSDDSQDGYYRASFSADSRYVLLSYDGPEVPWQKVVDLHSESPLSHAETIESNSGLRDRLKDYALPKINHFQLKVATDEETGADIVANVKEILPASFNPAKKYPVLFFVYGGPGSQTVTKAFALDFQRILSGLEDIIVVSVDGRGTGFMGRKFRTVVRDKLGHFEPLDQITTAKYYASKPYVDAEHIAIWGWSYGGYMTLKTLETDAGQTFRYGMSVAPVTNWRFYDSVYTERYMHTPQNNPKGYAEAAIHNVTAIAQNERFLLMHGTGDDNVHVQNSLVLLDLFDQNNVENYDVHVFPDSDHSISFNNANTIIYDKLHHWITSAFQGKFKTIL
SIO_010081: AWJ20_16
subclass of: SO_0000673
so part of: AWJ20_16
location: complement(42237..44834)
location: region:42237-44834:-1
so has part: feature:42237-44834:-1:exon

XP_018734273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42237-44834:-1:exon

AWJ20_17
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SLT2
locus tag: AWJ20_17
so part of: sequence
location: complement(<45313..>46773)
location: region:45313-46773:-1
so has part: feature:45313-46773:-1:exon
subclass of: SO_0000010

30033530
type: Gene
SIO_000068: ncbigene

position:45313:-1
position: 45313
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:46773:-1
position: 46773
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45313-46773:-1:exon

AWJ20_17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SLT2
locus tag: AWJ20_17
product: mitogen-activated serine/threonine-protein kinase SLT2
transcript id: XM_018878598.1
SIO_010081: AWJ20_17
subclass of: SO_0000673
so part of: AWJ20_17
location: complement(<45313..>46773)
location: region:45313-46773:-1
so has part: feature:45313-46773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45313-46773:-1:exon

AWJ20_17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SLT2
locus tag: AWJ20_17
inference: similar to AA sequence:KEGG_Orthology:K04464
note: Serine/threonine MAP kinase; involved in regulating maintenance of cell wall integrity, cell cycle progression, and nuclear mRNA retention in heat shock; required for mitophagy and pexophagy; affects recruitment of mitochondria to phagophore assembly site (PAS); plays a role in adaptive response of cells to cold; regulated by the PKC1-mediated signaling pathway; SLT2 has a paralog, KDX1, that arose from the whole genome duplication; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 12361575]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 23924898]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 12361575]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 23924898]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 12361575]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 12361575]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 23924898]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004707 - MAP kinase activity [Evidence IEA,IEA]; GO_function: GO:0004707 - MAP kinase activity [Evidence ISS] [PMID 8386319]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004672 - protein kinase activity [Evidence IDA] [PMID 16319894]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA,IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IDA] [PMID 20823268]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IDA] [PMID 24554767]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]; GO_process: GO:0000165 - MAPK cascade [Evidence IEA…
codon start: 1
product: mitogen-activated serine/threonine-protein kinase SLT2
translation: MIKAERHVYKVFNQDFTIDKRFHITKELGHGAYGIVCAARCPGSPEIPGIAIKKVTNIFSKKILCKRALRELRLLNHFRGHKNITCLYDMDIVDTNNFNELYLYEELMECDMHQIIRSQQPLTDAHYQSFIYQILVGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSSDPERNAGFLTEYVATRWYRAPEIMLSFQSYTKAIDIWSVGCILAELLGGKPFFKGKDYVDQLNQILHYLGTPSEETLQRIGSPRAQEYVRSLPYMPRIPFESLFPNANPEALDLLNKMLAFDPADRITVEEALEHPYLRIWHDPADEPVCPSEFDFSFEAVDDMDQMRQMILDEVMKFREMVRQPIPNQRQQEEAEAQAHAHAQAQAQAQAQAQAQAEAQAQAQAQAQAQAQAQAQQYADSSLAVEYTSPISMDQQHSLNAAFSRTDQLGIPSEEFRYQDQPPKPQENVGAPASAFDLERELEFGLDAR
SIO_010081: AWJ20_17
subclass of: SO_0000673
so part of: AWJ20_17
location: complement(45313..46773)
location: region:45313-46773:-1
so has part: feature:45313-46773:-1:exon

XP_018734274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45313-46773:-1:exon

AWJ20_18
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RPB8
locus tag: AWJ20_18
so part of: sequence
location: <49037..>49366
location: region:49037-49366:1
so has part: feature:49037-49366:1:exon
subclass of: SO_0000010

30033641
type: Gene
SIO_000068: ncbigene

position:49037:1
position: 49037
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:49366:1
position: 49366
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49037-49366:1:exon

AWJ20_18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RPB8
locus tag: AWJ20_18
product: DNA-directed RNA polymerase core subunit RPB8
transcript id: XM_018878706.1
SIO_010081: AWJ20_18
subclass of: SO_0000673
so part of: AWJ20_18
location: <49037..>49366
location: region:49037-49366:1
so has part: feature:49037-49366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49037-49366:1:exon

AWJ20_18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RPB8
locus tag: AWJ20_18
inference: similar to AA sequence:KEGG_Orthology:K03016
note: RNA polymerase subunit ABC14.5; common to RNA polymerases I, II, and III; GO_component: GO:0005736 - DNA-directed RNA polymerase I complex [Evidence IDA] [PMID 11486042]; GO_component: GO:0005736 - DNA-directed RNA polymerase I complex [Evidence IDA] [PMID 9837969]; GO_component: GO:0005665 - DNA-directed RNA polymerase II, core complex [Evidence IDA] [PMID 1331084]; GO_component: GO:0005665 - DNA-directed RNA polymerase II, core complex [Evidence IDA] [PMID 2183013]; GO_component: GO:0005665 - DNA-directed RNA polymerase II, core complex [Evidence IDA] [PMID 2186966]; GO_component: GO:0005666 - DNA-directed RNA polymerase III complex [Evidence IDA] [PMID 10611227]; GO_component: GO:0005666 - DNA-directed RNA polymerase III complex [Evidence IDA] [PMID 3905793]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO_function: GO:0001054 - RNA polymerase I activity [Evidence IDA] [PMID 9837969]; GO_function: GO:0001055 - RNA polymerase II activity [Evidence IDA] [PMID 8288647]; GO_function: GO:0001056 - RNA polymerase III activity [Evidence IDA] [PMID 3905793]; GO_function: GO:0003968 - RNA-directed RNA polymerase activity [Evidence IDA] [PMID 18004386]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]; GO_process: GO:0042797 - tRNA transcription from RNA polymerase III promoter [Evidence IDA] [PMID 3905793]; GO_process: GO:0006360 - transcription from RNA polymerase I promoter [Evidence IPI] [PMID 11486042]; GO_process: GO:0006360 - transcription from RNA polymerase I promoter [Evidence IDA] [PMID 9837969]; GO_process: GO:0006366 - transcription from RNA polymerase II promoter [Evidence IPI] [PMID 11486042]; GO_process: GO:0006383 - transcription from RNA polymerase III promoter [Evidence IPI] [PMID 11486042]; GO_process: GO:0006383 - transcription from RNA polymerase III promoter [Evidence IGI] [PMID 9927738]; GO_process…
codon start: 1
product: DNA-directed RNA polymerase core subunit RPB8
translation: MSATLFDDIFKVTSVDSSRYDRVSRITGQSSTSADIHLTLDVNTELFPVTKGTTLTVAVAQTISLDGEPSISSAGWREPKAGEKSLADDYDYVMYGTVYKFEESSADKM
SIO_010081: AWJ20_18
subclass of: SO_0000673
so part of: AWJ20_18
location: 49037..49366
location: region:49037-49366:1
so has part: feature:49037-49366:1:exon

XP_018734275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49037-49366:1:exon

AWJ20_19
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_19
so part of: sequence
location: complement(<51420..>51490)
location: region:51420-51490:-1
so has part: feature:51420-51490:-1:exon
subclass of: SO_0000663

30033752
type: Gene
SIO_000068: ncbigene

position:51420:-1
position: 51420
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:51490:-1
position: 51490
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51420-51490:-1:exon

AWJ20_19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_19
product: tRNA-Gly
SIO_010081: AWJ20_19
subclass of: SO_0000673
so part of: AWJ20_19
location: complement(<51420..>51490)
location: region:51420-51490:-1
so has part: feature:51420-51490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51420-51490:-1:exon

AWJ20_20
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YPS3
locus tag: AWJ20_20
so part of: sequence
location: <52538..>53896
location: region:52538-53896:1
so has part: feature:52538-53896:1:exon
subclass of: SO_0000010

30033863
type: Gene
SIO_000068: ncbigene

position:52538:1
position: 52538
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:53896:1
position: 53896
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52538-53896:1:exon

AWJ20_20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YPS3
locus tag: AWJ20_20
product: Yps3p
transcript id: XM_018878923.1
SIO_010081: AWJ20_20
subclass of: SO_0000673
so part of: AWJ20_20
location: <52538..>53896
location: region:52538-53896:1
so has part: feature:52538-53896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52538-53896:1:exon

AWJ20_20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YPS3
locus tag: AWJ20_20
note: Aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor; GO_component: GO:0031225 - anchored component of membrane [Evidence IEA]; GO_component: GO:0046658 - anchored component of plasma membrane [Evidence IDA,IPI] [PMID 11016834]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA,IEA]; GO_function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IDA,ISS] [PMID 10191273]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_process: GO:0031505 - fungal-type cell wall organization [Evidence IGI] [PMID 16087741]; GO_process: GO:0006508 - proteolysis [Evidence IEA,IEA]
codon start: 1
product: Yps3p
translation: MIGNNALLFVSALACTGAFALSDNTTSQVPKKTGSGYVLTDIVGKRADAHPNPRIYQYPQFLPDVVDTLLGDNILGNILLKERSDPAPVPVSNKFSYYEIDIEVGTPGQQLSLILDTGSSDLWGVSTSDIRCSNNGQGSLDCSQNTFNQEKSSTWQVNSSAPNFGIQYVDGSGAKGVWGNDVVSFGDVSLDSCSFGLATDSNSSTGIMGIAFPGQESTPYPYPNVPQLLKDQGYIETVAYSLWLNDVQASTGNILFGAVDHGKYDGPLYTIPIINTGSGSEPWDMAVTFSNITVCLGGVFSTIEFTEGTVILDSGTTFSYLPSNMVQPILKGLNAQYNSDISGYTVPCDVDDGGFIEFNLDGAIVVVLIQEFLLHLKTASGDIAYQNGKPLCQVGLVEQDDANSIHILGDTFLRSAYVVYDLQNYEISMANSALNSSFSDIEVIGSGGVRAL
SIO_010081: AWJ20_20
subclass of: SO_0000673
so part of: AWJ20_20
location: 52538..53896
location: region:52538-53896:1
so has part: feature:52538-53896:1:exon

XP_018734276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52538-53896:1:exon

AWJ20_21
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_21
so part of: sequence
location: complement(<54211..>54303)
location: region:54211-54303:-1
so has part: feature:54211-54303:-1:exon
subclass of: SO_0000663

30033973
type: Gene
SIO_000068: ncbigene

position:54211:-1
position: 54211
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:54303:-1
position: 54303
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54211-54303:-1:exon

AWJ20_21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_21
product: tRNA-Phe
SIO_010081: AWJ20_21
subclass of: SO_0000673
so part of: AWJ20_21
location: complement(<54211..>54303)
location: region:54211-54303:-1
so has part: feature:54211-54303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54211-54303:-1:exon

AWJ20_22
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TPO3
locus tag: AWJ20_22
so part of: sequence
location: <55160..>56650
location: region:55160-56650:1
so has part: feature:55160-56650:1:exon
subclass of: SO_0000010

30034084
type: Gene
SIO_000068: ncbigene

position:55160:1
position: 55160
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:56650:1
position: 56650
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55160-56650:1:exon

AWJ20_22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TPO3
locus tag: AWJ20_22
product: Tpo3p
transcript id: XM_018879127.1
SIO_010081: AWJ20_22
subclass of: SO_0000673
so part of: AWJ20_22
location: <55160..>56650
location: region:55160-56650:1
so has part: feature:55160-56650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55160-56650:1:exon

AWJ20_22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TPO3
locus tag: AWJ20_22
note: Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; TPO3 has a paralog, TPO2, that arose from the whole genome duplication; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IMP] [PMID 11171066]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 12562762]; GO_function: GO:0015297 - antiporter activity [Evidence IEA]; GO_function: GO:0000297 - spermine transmembrane transporter activity [Evidence IMP] [PMID 11171066]; GO_process: GO:0000296 - spermine transport [Evidence IMP] [PMID 11171066]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Tpo3p
translation: MNIPTAEKLSDLEKGPEPHPVSSLQDSTGTGTGPSPIIHVKAFEEGDPENPHNFPLSRKLYHTIVLVLFCFTCSMSSAMYTPALGDIEEKYNVTREVALMSTGVLLMGFIIGPIIWSAVNEAFGRWYSWTIGFFLFQLFQIPTGVDPNFRTLLVGRFFQGLFGVSTLVTFGASMSDIWGYKTRGFSAAIAVFSIFAAPALGPFIGSLLVEFAGFGYISWLVMMLGAILLVLNMFVKETAAPVIFHRKAIRMRKEGLNARAPIEEVPPTLMNLATKYCIRPFIMLVEDKALAFLCVYAGISYGLLYTILIALPVTFAEYRHFSFIPTYLPSIAVLVGVVITSLHLCVTNGAYIRAAEKAGVLMLPDQRLKPMMCGAIFLPIGLFIFGWTAPFTNVHWMGPIVGAAIVGYATSIIFIAAIMYMIESYGHFASSAFAANAIIRSMVAVLFLLVFSRMVEAMTLQGAFSFFGGISILIAPGPFILFKYGKVWRSLSKWTP
SIO_010081: AWJ20_22
subclass of: SO_0000673
so part of: AWJ20_22
location: 55160..56650
location: region:55160-56650:1
so has part: feature:55160-56650:1:exon

XP_018734277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55160-56650:1:exon

AWJ20_23
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MRPL25
locus tag: AWJ20_23
so part of: sequence
location: <57051..>57665
location: region:57051-57665:1
so has part: feature:57051-57665:1:exon
subclass of: SO_0000010

30034195
type: Gene
SIO_000068: ncbigene

position:57051:1
position: 57051
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:57665:1
position: 57665
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57051-57665:1:exon

AWJ20_23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MRPL25
locus tag: AWJ20_23
product: mitochondrial 54S ribosomal protein YmL25
transcript id: XM_018879237.1
SIO_010081: AWJ20_23
subclass of: SO_0000673
so part of: AWJ20_23
location: <57051..>57665
location: region:57051-57665:1
so has part: feature:57051-57665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57051-57665:1:exon

AWJ20_23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MRPL25
locus tag: AWJ20_23
inference: similar to AA sequence:KEGG_Orthology:K17438
note: Mitochondrial ribosomal protein of the large subunit; mutation confers increased replicative lifespan; GO_component: GO:0005762 - mitochondrial large ribosomal subunit [Evidence IPI] [PMID 12392552]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IPI] [PMID 12392552]; GO_process: GO:0032543 - mitochondrial translation [Evidence IC] [PMID 12392552]
codon start: 1
product: mitochondrial 54S ribosomal protein YmL25
translation: MRATQLLARSERLLASEVLANARQLKLAQETNVEAPQKGDAVTSTESASRDPFYAQLPSPLRKFFEKYPPSPFRKYSDKPTSTHAEDANPFLPNKHPITNSWHDPKYSLRRQADLYKMAYRFGVTHLLPKLGNGKTFYEEKYLTKTPPAGAMAFKLSKGERIAPIRQKEVDTAIAKADETIAKARGTKFLRKIEKKNNQGKRFV
SIO_010081: AWJ20_23
subclass of: SO_0000673
so part of: AWJ20_23
location: 57051..57665
location: region:57051-57665:1
so has part: feature:57051-57665:1:exon

XP_018734278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57051-57665:1:exon

AWJ20_24
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PCS60
locus tag: AWJ20_24
so part of: sequence
location: complement(<57742..>59451)
location: region:57742-59451:-1
so has part: feature:57742-59451:-1:exon
subclass of: SO_0000010

30034306
type: Gene
SIO_000068: ncbigene

position:57742:-1
position: 57742
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:59451:-1
position: 59451
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57742-59451:-1:exon

AWJ20_24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PCS60
locus tag: AWJ20_24
product: Pcs60p
transcript id: XM_018879343.1
SIO_010081: AWJ20_24
subclass of: SO_0000673
so part of: AWJ20_24
location: complement(<57742..>59451)
location: region:57742-59451:-1
so has part: feature:57742-59451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57742-59451:-1:exon

AWJ20_24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PCS60
locus tag: AWJ20_24
note: Oxalyl-CoA synthetase; capable of catalyzing conversion of oxalate to oxalyl-CoA; catalyzes first step in pathway of oxalate degradation that functions to protect yeast from inhibitory effects of oxalate; peroxisomal protein that binds mRNA; localizes to both peroxisomal peripheral membrane and matrix, expression is highly inducible by oleic acid; similar to E. coli long chain acyl-CoA synthetase; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005782 - peroxisomal matrix [Evidence IEA]; GO_component: GO:0005782 - peroxisomal matrix [Evidence IDA] [PMID 8841414]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IEA]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IDA] [PMID 8841414]; GO_component: GO:0005777 - peroxisome [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 20844764]; GO_function: GO:0050203 - oxalate-CoA ligase activity [Evidence IDA,IMP] [PMID 24291261]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0033611 - oxalate catabolic process [Evidence IDA,IMP] [PMID 24291261]
codon start: 1
product: Pcs60p
translation: MILLRFPTFIRAGPSTQAFKLRYKRKFSMTRQFSILADHPIVGKLKNHPRDKVAIRHVISGNSYTYGQLSDDIYKWHNILQSKLPSSGNGSRIAIMGENSYQFAVLFFATLMLPKTLAMPLCTNHTSAEIKYQLENSESSTIITPERFVDKVEEFVSPERKLIVFEEFDGNDVEASTSTSESTVSSPSTSDSSTPSGYMLYTSGTSGNPKGVVTPLETYVAQADALTKAWDINSNTAMLQTLPLHHVHGLVIGMTLPLLAGGSVDFLFPFSPKVFVDRITDASLPPINTYTAVPTIYTKLVSYVKQFQSDKEQFEKINSGLHNLHLAMCGSAALPSPLRNDWNKIVGDKVPLLERYGMTETSITLSQPLDPQYRVDGSVGAPVPSVIARLVDPDTSKVIYQSNEKSSHDTEASGELQLAGPVVFKEYWNKPEATSETFTEDGWFRTGDICRADASGNIFILGRASMDIIKSGGEKLSALEIEREILSLEEVDECSVVGVASEEWGQEVAVVAVLSEKGRASNFDLARLKSALKKTLANYKIPKKLLVVESIPRNQMGKVNKKTLVKIFD
SIO_010081: AWJ20_24
subclass of: SO_0000673
so part of: AWJ20_24
location: complement(57742..59451)
location: region:57742-59451:-1
so has part: feature:57742-59451:-1:exon

XP_018734279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57742-59451:-1:exon

AWJ20_25
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SMD1
locus tag: AWJ20_25
so part of: sequence
location: complement(<60984..>61322)
location: region:60984-61322:-1
so has part: feature:60984-61322:-1:exon
subclass of: SO_0000010

30034417
type: Gene
SIO_000068: ncbigene

position:60984:-1
position: 60984
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:61322:-1
position: 61322
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60984-61322:-1:exon

AWJ20_25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SMD1
locus tag: AWJ20_25
product: Smd1p
transcript id: XM_018879447.1
SIO_010081: AWJ20_25
subclass of: SO_0000673
so part of: AWJ20_25
location: complement(<60984..>61322)
location: region:60984-61322:-1
so has part: feature:60984-61322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60984-61322:-1:exon

AWJ20_25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SMD1
locus tag: AWJ20_25
inference: similar to AA sequence:KEGG_Orthology:K11087
note: Core Sm protein Sm D1; part of heteroheptameric complex (with Smb1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; relocalizes to the cytosol in response to hypoxia; homolog of human Sm D1; protein abundance increases in response to DNA replication stress; GO_component: GO:0005685 - U1 snRNP [Evidence IDA] [PMID 9012791]; GO_component: GO:0005685 - U1 snRNP [Evidence IDA] [PMID 9630245]; GO_component: GO:0071004 - U2-type prespliceosome [Evidence IDA] [PMID 16618970]; GO_component: GO:0046540 - U4/U6 x U5 tri-snRNP complex [Evidence IDA] [PMID 10377396]; GO_component: GO:0046540 - U4/U6 x U5 tri-snRNP complex [Evidence IDA] [PMID 10449419]; GO_component: GO:0005682 - U5 snRNP [Evidence IDA] [PMID 11720284]; GO_component: GO:0005682 - U5 snRNP [Evidence IDA] [PMID 11720285]; GO_component: GO:0000243 - commitment complex [Evidence IPI] [PMID 10072386]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 22932476]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22932476]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IPI] [PMID 10072386]; GO_process: GO:0008380 - RNA splicing [Evidence IEA]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]; GO_process: GO:0000398 - mRNA splicing, via spliceosome [Evidence IPI] [PMID 10072386]; GO_process: GO:0000398 - mRNA splicing, via spliceosome [Evidence IPI] [PMID 10377396]; GO_process: GO:0000398 - mRNA splicing, via spliceosome [Evidence IMP] [PMID 8430095]
codon start: 1
product: Smd1p
translation: MKLTSESVQIELKNGTVVSGTIVSVSPNMNTTLRGVKMTIKDRDPVALDYINLRGNTIRFYILPESLPLDTLLIDDTPKPKQRSKPEITRGRGRGRGGRGGGRGRGRPGRGF
SIO_010081: AWJ20_25
subclass of: SO_0000673
so part of: AWJ20_25
location: complement(60984..61322)
location: region:60984-61322:-1
so has part: feature:60984-61322:-1:exon

XP_018734280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60984-61322:-1:exon

AWJ20_26
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MET7
locus tag: AWJ20_26
so part of: sequence
location: <65268..>66761
location: region:65268-66761:1
so has part: feature:65268-66761:1:exon
subclass of: SO_0000010

30034528
type: Gene
SIO_000068: ncbigene

position:65268:1
position: 65268
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:66761:1
position: 66761
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65268-66761:1:exon

AWJ20_26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MET7
locus tag: AWJ20_26
product: tetrahydrofolate synthase
transcript id: XM_018879551.1
SIO_010081: AWJ20_26
subclass of: SO_0000673
so part of: AWJ20_26
location: <65268..>66761
location: region:65268-66761:1
so has part: feature:65268-66761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65268-66761:1:exon

AWJ20_26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MET7
locus tag: AWJ20_26
inference: similar to AA sequence:KEGG_Orthology:K01930
note: Folylpolyglutamate synthetase; catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA; protein abundance increases in response to DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 10775416]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 10775416]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0016874 - ligase activity [Evidence IEA,IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA,IEA]; GO_function: GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IDA] [PMID 10775416]; GO_process: GO:0009058 - biosynthetic process [Evidence IEA]; GO_process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]; GO_process: GO:0006730 - one-carbon metabolic process [Evidence IEA]; GO_process: GO:0006730 - one-carbon metabolic process [Evidence IMP] [PMID 10775416]; GO_process: GO:0046901 - tetrahydrofolylpolyglutamate biosynthetic process [Evidence IEA]
codon start: 1
product: tetrahydrofolate synthase
translation: MTSRTYADAIEALNSLQTNFSIIDAIRKSGGKSNKDAIPQMLEWARRSGYPDPKAFDKLNIIHVTGTKGKGSTCAFVQSILNQYRVESPSIGEHGISKIGLYTSPHLKSVRERIRINGEPIAEEKFVKYFFELWDQLESTSSNEADFPDMIAGVKPVYFRYLTLLSFHIFLHEGVDTAIYEVGIGGEYDSTNIIVSPTATGVSSLGLDHTNILGNTIEEIAWNKSGIFKKGTPALTIPQPEGGDAMKVLKERALEKAGRELTVVPVHPLIANGTAKLGLAGEFQKTNASLAVGLVTEHLRKLNIDSDNLATANSLPPKFLAGLEAASWPGRCQTLKQGTITYSIDGAHTQESITEAGKWYVSRVKDENQSNPPAHRVLLFNQQNRDANALVTTLHTVLSKDNVKFDHVIFTTNVTRKTGYSADLTSLNTSKEAVDELVVQNALSSAWEKIDTTAQRHVFSNIEESVNFIKSLGGETSVLVTGSLILVGGFLAVVEDN
SIO_010081: AWJ20_26
subclass of: SO_0000673
so part of: AWJ20_26
location: 65268..66761
location: region:65268-66761:1
so has part: feature:65268-66761:1:exon

XP_018734281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65268-66761:1:exon

AWJ20_27
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TDP1
locus tag: AWJ20_27
so part of: sequence
location: complement(<66962..>68458)
location: region:66962-68458:-1
so has part: feature:66962-68458:-1:exon
subclass of: SO_0000010

30034639
type: Gene
SIO_000068: ncbigene

position:66962:-1
position: 66962
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:68458:-1
position: 68458
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66962-68458:-1:exon

AWJ20_27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TDP1
locus tag: AWJ20_27
product: tyrosyl-DNA phosphodiesterase 1
transcript id: XM_018879661.1
SIO_010081: AWJ20_27
subclass of: SO_0000673
so part of: AWJ20_27
location: complement(<66962..>68458)
location: region:66962-68458:-1
so has part: feature:66962-68458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66962-68458:-1:exon

AWJ20_27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TDP1
locus tag: AWJ20_27
inference: similar to AA sequence:KEGG_Orthology:K10862
note: Tyrosyl-DNA phosphodiesterase I; hydrolyzes 3' and 5'-phosphotyrosyl bonds; involved in the repair of DNA lesions created by topoisomerase I and topoisomerase II; mutations in human homolog result in the neurodegenerative disease SCANI; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 12206772]; GO_function: GO:0017005 - 3'-tyrosyl-DNA phosphodiesterase activity [Evidence IDA] [PMID 10521354]; GO_function: GO:0070260 - 5'-tyrosyl-DNA phosphodiesterase activity [Evidence IDA] [PMID 16751265]; GO_function: GO:0004527 - exonuclease activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0004518 - nuclease activity [Evidence IEA]; GO_function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA,IEA]; GO_process: GO:0006281 - DNA repair [Evidence IMP] [PMID 10521354]; GO_process: GO:0006281 - DNA repair [Evidence IMP] [PMID 15135727]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0090305 - nucleic acid phosphodiester bond hydrolysis [Evidence IEA]
codon start: 1
product: tyrosyl-DNA phosphodiesterase 1
translation: MKRSQESSGDETRQTQKTKTENKAEVRSSPIYLTTIEDLPSEENVDTVGLRDLIGLEDMVSMFQFNFMFTLPFILEKLHPRARSVVNSYFIYGRKPIGDDHTGDMLRAEREAFGSKQNITIDGETLMNAYATHHTKMMVLFFKTKDGEEEAQVVIHTANLIEFDWSNMTQGVWKSPRLKLKSRGESTNSDSSSVGIKFGNDFLKYLRKYRNKSAKLAAEMISKYDFSPVEAIFVASAPGNYNTNDPEYGQWGIVKLQKEIAKFSKSSENGTESRTGYVVAQVSSIATLGATDSYLGPIVTNALNGRPFFDKVTEKTSPLKLIFPSVEDVADSLEGYVSGSSIHFKRQSAPQLKQLEYMKLLLHRWHALKAGRQRCAPHIKTYTKVINNGQELEWLLLTSANLSKHAWGTVNKTKANHWIQSWECGVLIHANAFRGKNNSLVPVYKSNNSNVEGQKDKNTICVRMPYDLPLQKYTPRDVIWSANENYTEPDWRGNKWIL
SIO_010081: AWJ20_27
subclass of: SO_0000673
so part of: AWJ20_27
location: complement(66962..68458)
location: region:66962-68458:-1
so has part: feature:66962-68458:-1:exon

XP_018734282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66962-68458:-1:exon

AWJ20_28
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BOI1
locus tag: AWJ20_28
so part of: sequence
location: <71937..>74573
location: region:71937-74573:1
so has part: feature:71937-74573:1:exon
subclass of: SO_0000010

30034750
type: Gene
SIO_000068: ncbigene

position:71937:1
position: 71937
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:74573:1
position: 74573
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71937-74573:1:exon

AWJ20_28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BOI1
locus tag: AWJ20_28
product: Boi1p
transcript id: XM_018879768.1
SIO_010081: AWJ20_28
subclass of: SO_0000673
so part of: AWJ20_28
location: <71937..>74573
location: region:71937-74573:1
so has part: feature:71937-74573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71937-74573:1:exon

AWJ20_28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BOI1
locus tag: AWJ20_28
note: Protein implicated in polar growth; functionally redundant with Boi2p; interacts with bud-emergence protein Bem1p; contains an SH3 (src homology 3) domain and a PH (pleckstrin homology) domain; relocalizes from bud neck to cytoplasm upon DNA replication stress; BOI1 has a paralog, BOI2, that arose from the whole genome duplication; GO_component: GO:0005933 - cellular bud [Evidence IDA] [PMID 12097146]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 12097146]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 22842922]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 22842922]; GO_component: GO:0030427 - site of polarized growth [Evidence IDA] [PMID 12097146]; GO_function: GO:0005543 - phospholipid binding [Evidence IDA] [PMID 12097146]; GO_process: GO:0007118 - budding cell apical bud growth [Evidence IGI] [PMID 17417630]; GO_process: GO:0007109 - cytokinesis, completion of separation [Evidence IGI] [PMID 16615892]
codon start: 1
product: Boi1p
translation: MTGLFPKVFTTELIVTNEPSGGNRTSEIRHKVLSGSSVSGGSSGVGSTAGPSVHDTISDIDEAISEFQNRGIGGVTAGISPAMSSPGQGSGPRSPLVHNSHANGEFNGNGSNSHMSNGGPNHQQYADNNAIGSNDGGLPSLNDIPNWTSYDISQYFAYRGYEPDVCEQFIRHKITGSILLELDLAYLKEIDIASFGTRFEISKDIKHLNSLVSAQMTGEGASIAAATAAIKRKSKAKSTHSRDRTASSSKGLMLPPQTSPKKNPINDRTSPPVNPRTSSLRSSISTTNETTFSAIGSPYHAKNRSNDSDVVRHPSFNPNWTHPIKTSADLDSPQTPEIVNDNSAHFTSNIGLLSPNSLNEYNETVPVPRSPQSQVPAGRRRSYTIDALTSRFDSSPLQPATAPTNTQQHIRNPSGDTLRDKAKENFYQRGHARSTSSLGLQARNDDITKSANEARKSHRRHSSIMSFMTTTQNLASTLTSPTESQVEQSNDLNAYSSSSREDIGMESESGASSVGISSSASGNNSTSSTAKKYLDLLPGRGNNNNNNSSANNNSATKRIGTDPIQSVTEAPPPSPKRSATFTKPKLRSTPSQPNLKKISKQQTSAFMEGIRQITADEAAKTASVSGWLHKRGGVGVGTWKSRYFTLHGTRLSYFTSQKDTKERGLIDITAHRVLPARESEDKLISIYAASVGAGRHCFKLVPPAPGFKKGVTFTAPKVHYFAVDTKEEMRMWMASLMKATIDRDDSVPVISSCATPTVPLPRAQELFAEARARDEDLRARMIAGGLASNPSSNAISNKARANNSSSTNETYPTTPDSPTGSSLQSSRTVSSTNSSSLKVSSPSSFSPVAAFGEYQPSDIRHLTTKTAGLQIVTNLEDS
SIO_010081: AWJ20_28
subclass of: SO_0000673
so part of: AWJ20_28
location: 71937..74573
location: region:71937-74573:1
so has part: feature:71937-74573:1:exon

XP_018734283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71937-74573:1:exon

AWJ20_29
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CDC27
locus tag: AWJ20_29
so part of: sequence
location: complement(<74755..>77142)
location: region:74755-77142:-1
so has part: feature:74755-77142:-1:exon
subclass of: SO_0000010

30034861
type: Gene
SIO_000068: ncbigene

position:74755:-1
position: 74755
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:77142:-1
position: 77142
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74755-77142:-1:exon

AWJ20_29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CDC27
locus tag: AWJ20_29
product: anaphase promoting complex subunit CDC27
transcript id: XM_018879875.1
SIO_010081: AWJ20_29
subclass of: SO_0000673
so part of: AWJ20_29
location: complement(<74755..>77142)
location: region:74755-77142:-1
so has part: feature:74755-77142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74755-77142:-1:exon

AWJ20_29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CDC27
locus tag: AWJ20_29
inference: similar to AA sequence:KEGG_Orthology:K03350
note: Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; GO_component: GO:0005680 - anaphase-promoting complex [Evidence IDA] [PMID 9469814]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0004842 - ubiquitin-protein transferase activity [Evidence IMP] [PMID 16481473]; GO_process: GO:0031145 - anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 16481473]; GO_process: GO:0031145 - anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process [Evidence IDA] [PMID 8895471]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0007067 - mitotic nuclear division [Evidence IEA]; GO_process: GO:0016567 - protein ubiquitination [Evidence IEA]; GO_process: GO:0016567 - protein ubiquitination [Evidence IDA,IMP] [PMID 16481473]
codon start: 1
product: anaphase promoting complex subunit CDC27
translation: MNGSMNSFHTTNNGSADNGRGPRPTSSTADRDGYIERLLTHYVWEALDLDMLDSAEFTMEKLLALDPENGSYKHLMALILYRQGRYKAAANIANTSSNHTGCVYIYSRCCLKLKMYGKGIEALEKTKHNWASVAKNYTDNATNERRVIPDQAALNALLGKLYQLQGDKVDALKAYGSSVRANPFLWEPVEALCKLGIKLRVSNAFRVEHLNDALMSSSSAGSGGVNTTGNDNANLNNGNISNGLSNPANTSINDPFTTPVGNGNQGTSSIPANPFKFGQQFLKNSMLNKANEETMSAPVTSKQPAANAPATTSDSSYSTPSDTRTSRPNGLPLAPQKRSSRNVTAGALANSNPEAKTGLPFPRRSARMAQTAQPSTINTTVTTNQKRNLMTPLSRAGPQGSTTASSTSITSNAASTSNLSTTSVVPGAHHATRALAQPQVASTTVAAALKRSRLKPDRESLAKRDAQLYIISLYRQITSAFILCSRYECRQAIALFDQLPEQQKNTPWVLAKLGRCYFEMVDYKEAEKVFIKLRKVDRCRIQDMEYYSTLLWHLRKEVELSLLAHELMEIERNSPQAWCTLGNSFSLKRETSQAQKCFKRAINIDPDSPYAYTLLAHEQVATEAYESAQDSFRLAIKADNRHYNAWYGLGMVFMRLDNFDLAELHFSKAAMINPSNVVLICCIGMVLEKKGRFAEALEQYKRACEIQSNSALARYKKARVLIQLQLYNAALVEFEHLQKLAPDEASVHFLLGQLYKLLDNRDLAIKHFTIALNLDPKGSGLIKDAIEGLNVFNTS
SIO_010081: AWJ20_29
subclass of: SO_0000673
so part of: AWJ20_29
location: complement(74755..77142)
location: region:74755-77142:-1
so has part: feature:74755-77142:-1:exon

XP_018734284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74755-77142:-1:exon

AWJ20_30
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TMN3
locus tag: AWJ20_30
so part of: sequence
location: <78732..>80636
location: region:78732-80636:1
so has part: feature:78732-80636:1:exon
subclass of: SO_0000010

30034973
type: Gene
SIO_000068: ncbigene

position:78732:1
position: 78732
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:80636:1
position: 80636
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78732-80636:1:exon

AWJ20_30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TMN3
locus tag: AWJ20_30
product: Tmn3p
transcript id: XM_018879986.1
SIO_010081: AWJ20_30
subclass of: SO_0000673
so part of: AWJ20_30
location: <78732..>80636
location: region:78732-80636:1
so has part: feature:78732-80636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78732-80636:1:exon

AWJ20_30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TMN3
locus tag: AWJ20_30
inference: similar to AA sequence:KEGG_Orthology:K17086
note: Protein with a role in cellular adhesion and filamentous growth; similar to Emp70p and Tmn2p; member of Transmembrane Nine family with 9 transmembrane segments; localizes to Golgi; induced by 8-methoxypsoralen plus UVA irradiation; GO_component: GO:0030137 - COPI-coated vesicle [Evidence IDA] [PMID 14562095]; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA]; GO_component: GO:0005794 - Golgi apparatus [Evidence IDA] [PMID 14562095]; GO_component: GO:0000139 - Golgi membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006878 - cellular copper ion homeostasis [Evidence IGI] [PMID 20681974]; GO_process: GO:0001403 - invasive growth in response to glucose limitation [Evidence IMP] [PMID 18178563]; GO_process: GO:0007124 - pseudohyphal growth [Evidence IGI] [PMID 18178563]; GO_process: GO:0007034 - vacuolar transport [Evidence IGI] [PMID 20526336]
codon start: 1
product: Tmn3p
translation: MVMVCEGFYIPGWSIKSYKDGEKVPLFVNKVTSDTTQLPYAYYDLPFVCKPSKDAERVPLNLGEVLLGDRIWGSDYQIHQGKQVDCAELCTAKVDKAALERAHELVSSNYLVEWIVDNLPGATAFISVDRSKRYYASGFPLGVVDETTGKTYLNNHVSIILRYRESSRDKGRNVIVGFEVYPKSVSTDSKKCPGNNDKFQPYLIDPEKENDEIRFTYTVLWREDKTVEWADRWSLYFSYLTHSSKAPKVNSLHWLAIVNSLVIASLLTILVGVVLVRTLSRDIQSYKKISSKQGDDDLVGELDKDMLEEESGWKLVYADVFRPPVLSSVLSSLIGSGIQIFVMALATIGFACFGVLNPSYRGGLLSYALFIFAFAGGFAGFVTARINKYMGNEYHWSRSVWLTAVLAPASVLIIVLTLNLFVWSSASSSALPFGTIVALFSIWLLISCPLVVVGAIIGNKRQASPPPTRISAIPRQIPNNAGYNLVRSTPFAVLAGGLLPFAVIFVELVTIFQSLWLEKSGYYYMYGFFGVVFIVLVLTVVEMSILTTYILLNSEDYRWWWRSFLVGTGSAWWVFLYSIYYYFTKLNVDGFISALLFFGYTLLGCLAYGLVTGAIGFLSSYVFVFRIYNAIKAD
SIO_010081: AWJ20_30
subclass of: SO_0000673
so part of: AWJ20_30
location: 78732..80636
location: region:78732-80636:1
so has part: feature:78732-80636:1:exon

XP_018734285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78732-80636:1:exon

AWJ20_31
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_31
so part of: sequence
location: <81188..>81269
location: region:81188-81269:1
so has part: feature:81188-81269:1:exon
subclass of: SO_0000663

30035084
type: Gene
SIO_000068: ncbigene

position:81188:1
position: 81188
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:81269:1
position: 81269
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81188-81269:1:exon

AWJ20_31
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_31
product: tRNA-Ser
SIO_010081: AWJ20_31
subclass of: SO_0000673
so part of: AWJ20_31
location: <81188..>81269
location: region:81188-81269:1
so has part: feature:81188-81269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81188-81269:1:exon

AWJ20_32
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FDH1
locus tag: AWJ20_32
so part of: sequence
location: complement(<87056..>87262)
location: region:87056-87262:-1
so has part: feature:87056-87262:-1:exon
subclass of: SO_0000010

30035195
type: Gene
SIO_000068: ncbigene

position:87056:-1
position: 87056
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:87262:-1
position: 87262
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87056-87262:-1:exon

AWJ20_32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FDH1
locus tag: AWJ20_32
product: formate dehydrogenase (NAD+)
transcript id: XM_018880206.1
SIO_010081: AWJ20_32
subclass of: SO_0000673
so part of: AWJ20_32
location: complement(<87056..>87262)
location: region:87056-87262:-1
so has part: feature:87056-87262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87056-87262:-1:exon

AWJ20_32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FDH1
locus tag: AWJ20_32
inference: similar to AA sequence:KEGG_Orthology:K00122
note: NAD(+)-dependent formate dehydrogenase; may protect cells from exogenous formate; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 11921099]; GO_function: GO:0051287 - NAD binding [Evidence IEA]; GO_function: GO:0048037 - cofactor binding [Evidence IEA]; GO_function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]; GO_function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IGI,ISS] [PMID 11921099]; GO_function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IDA] [PMID 21246355]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_process: GO:0042183 - formate catabolic process [Evidence IGI] [PMID 11921099]; GO_process: GO:0042183 - formate catabolic process [Evidence IGI] [PMID 19564482]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: formate dehydrogenase (NAD+)
translation: MFNKYGAGNAMTPHISGTSLDAQARYALGTKNILQSYLSGKFDYRPEDVIVIDGHYGTRSYGDDKKLK
SIO_010081: AWJ20_32
subclass of: SO_0000673
so part of: AWJ20_32
location: complement(87056..87262)
location: region:87056-87262:-1
so has part: feature:87056-87262:-1:exon

XP_018734286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87056-87262:-1:exon

AWJ20_33
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FDH1
locus tag: AWJ20_33
so part of: sequence
location: complement(<87345..>88211)
location: region:87345-88211:-1
so has part: feature:87345-88211:-1:exon
subclass of: SO_0000010

30035306
type: Gene
SIO_000068: ncbigene

position:87345:-1
position: 87345
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:88211:-1
position: 88211
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87345-88211:-1:exon

AWJ20_33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FDH1
locus tag: AWJ20_33
product: formate dehydrogenase (NAD+)
transcript id: XM_018880307.1
SIO_010081: AWJ20_33
subclass of: SO_0000673
so part of: AWJ20_33
location: complement(<87345..>88211)
location: region:87345-88211:-1
so has part: feature:87345-88211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87345-88211:-1:exon

AWJ20_33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FDH1
locus tag: AWJ20_33
inference: similar to AA sequence:KEGG_Orthology:K00122
note: NAD(+)-dependent formate dehydrogenase; may protect cells from exogenous formate; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 11921099]; GO_function: GO:0051287 - NAD binding [Evidence IEA]; GO_function: GO:0048037 - cofactor binding [Evidence IEA]; GO_function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]; GO_function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IGI,ISS] [PMID 11921099]; GO_function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IDA] [PMID 21246355]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_process: GO:0042183 - formate catabolic process [Evidence IGI] [PMID 11921099]; GO_process: GO:0042183 - formate catabolic process [Evidence IGI] [PMID 19564482]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: formate dehydrogenase (NAD+)
translation: MKVLLVLYSAGQHAQDEPKLLGCTENELGLRKWLEAQGHELVTTADKDGENSELDKHIVDAEIVITTPFHPGYITRERINKAKNLKICITAGIGSDHVDLAAANERKIAVLEVTGSNVQSVAEHVLMTMLVLVRNFVPAHEQYVSGGWDVAAVAKDSYDLEGKVIGTVGVGRIGTRVLQRVKPFNPKEMLYFDYQPLAPELEKEIGARRVDKLEDMLAQCDVVTINCPLHESTKGLFNKELISKMKKGAWLVNTARGAIVVAQDVADALRSGQLRGYGGDTSFPQRKY
SIO_010081: AWJ20_33
subclass of: SO_0000673
so part of: AWJ20_33
location: complement(87345..88211)
location: region:87345-88211:-1
so has part: feature:87345-88211:-1:exon

XP_018734287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87345-88211:-1:exon

AWJ20_34
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DSD1
locus tag: AWJ20_34
so part of: sequence
location: <88842..>90113
location: region:88842-90113:1
so has part: feature:88842-90113:1:exon
subclass of: SO_0000010

30035417
type: Gene
SIO_000068: ncbigene

position:88842:1
position: 88842
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:90113:1
position: 90113
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88842-90113:1:exon

AWJ20_34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DSD1
locus tag: AWJ20_34
product: D-serine ammonia-lyase DSD1
transcript id: XM_018880410.1
SIO_010081: AWJ20_34
subclass of: SO_0000673
so part of: AWJ20_34
location: <88842..>90113
location: region:88842-90113:1
so has part: feature:88842-90113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88842-90113:1:exon

AWJ20_34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DSD1
locus tag: AWJ20_34
note: D-serine dehydratase (aka D-serine ammonia-lyase); converts D-serine to pyruvate and ammonia by a reaction dependent on pyridoxal 5'-phosphate and zinc; may play a role in D-serine detoxification; L-serine is not a substrate; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO_function: GO:0008721 - D-serine ammonia-lyase activity [Evidence IDA] [PMID 17869212]; GO_function: GO:0008721 - D-serine ammonia-lyase activity [Evidence IDA] [PMID 17937657]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_process: GO:0070178 - D-serine metabolic process [Evidence IMP] [PMID 17937657]
codon start: 1
product: D-serine ammonia-lyase DSD1
translation: MSKQFRNFYPQVDVEALRQEYIGKNVLDLPTPSFIVNKDTIERNCLHMIQGAKNIKASFRPHLKTHKTLEITKFQLGDYSTKVVVSTLREAWSLIPFYEQGRVRDVLYGLPIVKSKIPELDDLSTYVDTLRILVDNIDQLKLLQEYGREKPWHIMIKVDMGTSRAGLHYQSEEFKQLVQASVDEHSDVVTLDGFYCHAGHSYSSHSSKEAEDYLYDEIVAGNVAAGYAKSIVPSGKYLVSVGSTPTGHASAEIALTKILPVSDNIDEIELHAGNYALCDLQQWATGCISEDNIACRVLVEVASTYPGRGKSELGEVLINAGVIGLAREPGQLPGFGLVSSKPYDNWYVDRVSQEHGILTPFTESTVASIPKPEQIAKEFPPLGTKLLVIPQHACIASNSYQWYFITDDEGKMVVDVWVPWRGW
SIO_010081: AWJ20_34
subclass of: SO_0000673
so part of: AWJ20_34
location: 88842..90113
location: region:88842-90113:1
so has part: feature:88842-90113:1:exon

XP_018734288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88842-90113:1:exon

AWJ20_35
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TAF8
locus tag: AWJ20_35
so part of: sequence
location: complement(<90182..>92092)
location: region:90182-92092:-1
so has part: feature:90182-92092:-1:exon
subclass of: SO_0000010

30035528
type: Gene
SIO_000068: ncbigene

position:90182:-1
position: 90182
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:92092:-1
position: 92092
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90182-92092:-1:exon

AWJ20_35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TAF8
locus tag: AWJ20_35
product: Taf8p
transcript id: XM_018880521.1
SIO_010081: AWJ20_35
subclass of: SO_0000673
so part of: AWJ20_35
location: complement(<90182..>92092)
location: region:90182-92092:-1
so has part: feature:90182-92092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90182-92092:-1:exon

AWJ20_35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TAF8
locus tag: AWJ20_35
inference: similar to AA sequence:KEGG_Orthology:K14649
note: TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 11914276]; GO_component: GO:0005669 - transcription factor TFIID complex [Evidence IDA] [PMID 10788514]; GO_component: GO:0005669 - transcription factor TFIID complex [Evidence IDA] [PMID 15448131]; GO_function: GO:0001075 - RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly [Evidence IC] [PMID 15448131]; GO_process: GO:0051123 - RNA polymerase II transcriptional preinitiation complex assembly [Evidence IC] [PMID 10788514]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] [PMID 12138208]; GO_process: GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] [PMID 15448131]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Taf8p
translation: MTELDKKDLPKHESNNEGEGELKESPADSPRDDSIVNGNREGSKVNIDEENRSLDAHTNGKTHEKKNSVASSRTSIEVEEEEEEEDDDDDDDDDDDDEGDTEGEAEPTSVKSELPAKSKISASPGPKRLGRREKYLLEVNPQHAPTYFGTLETIFRRALASILASRGISTNAHAFEFLSLLAEEYMDDLFSKLFKFSQIQRRVQPSVSDLKLTMEHFGIRITDLERERQLKSRYIDAFNNLKLDPEPEQLVPEAEAFFQSPISDLRHLVPSKKKAGAYIPSWMPPLPPDHTFMSTPQYSRNITEPRELREKLVEEGRLAEAALRRLVGMEIDNVGGTEPDNNNGIVHIEEDEEEIANELDKREINKGPISLAGSELKSSESNSQGDSDSDTDGDFEDLDLSQTDKETVDISLKKEDEAMEISTHESGEPVKQEDKDIAQVNEKDEDGDVKIEENGSLKSVSELTQDNEESEASPSVAKSVHFADANGHVKTEEAAQPVVQKPAKSFSLKITLGSKKTTTTIRPEVTTSELISLESGQKDVLSYASERLKIIERRKRKEESKKRRLPDDPSRETIQETLPKEESLPSDGDIVTKATSSTTLDDELRKVLASVSKRNKRSTSAIPNQELVMWDSNRYI
SIO_010081: AWJ20_35
subclass of: SO_0000673
so part of: AWJ20_35
location: complement(90182..92092)
location: region:90182-92092:-1
so has part: feature:90182-92092:-1:exon

XP_018734289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90182-92092:-1:exon

AWJ20_36
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DLD1
locus tag: AWJ20_36
so part of: sequence
location: complement(<92508..>94247)
location: region:92508-94247:-1
so has part: feature:92508-94247:-1:exon
subclass of: SO_0000010

30035639
type: Gene
SIO_000068: ncbigene

position:92508:-1
position: 92508
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:94247:-1
position: 94247
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92508-94247:-1:exon

AWJ20_36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DLD1
locus tag: AWJ20_36
product: Dld1p
transcript id: XM_018880627.1
SIO_010081: AWJ20_36
subclass of: SO_0000673
so part of: AWJ20_36
location: complement(<92508..>94247)
location: region:92508-94247:-1
so has part: feature:92508-94247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92508-94247:-1:exon

AWJ20_36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DLD1
locus tag: AWJ20_36
inference: similar to AA sequence:KEGG_Orthology:K00102
note: D-lactate dehydrogenase; oxidizes D-lactate to pyruvate, transcription is heme-dependent, repressed by glucose, and derepressed in ethanol or lactate; located in the mitochondrial inner membrane; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IDA] [PMID 9525904]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 11502169]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0004458 - D-lactate dehydrogenase (cytochrome) activity [Evidence IEA]; GO_function: GO:0004458 - D-lactate dehydrogenase (cytochrome) activity [Evidence IMP,ISS] [PMID 8492799]; GO_function: GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]; GO_process: GO:0009060 - aerobic respiration [Evidence IMP] [PMID 8492799]; GO_process: GO:0044262 - cellular carbohydrate metabolic process [Evidence IMP] [PMID 8492799]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: Dld1p
translation: MGSIIRTRQLETLLRVRLNLTRPLSRSVSSSVSKRSPNPPSGGAKPPKPQSNAESNRQSSKSNGGILLTLAVSGIVGAGSFFAAKSLYQSEQRVSSIEKKWDEPKYGGKEEFHRALPELKAILGEDGVSIDDEDLKAHGYSDWSTYNIETNPIAIAYPKSTEEVSEIAKVCHKYKLPMIGFSGGSSLEGNFCAPYGGVCIDFVHMNKIVEIRPQDMDVTVQPAVGWMALNEELAKEGHNLFFAVDPGPTAKIGGMVGTSCSGTNCVRYGPMRNHIVNLTVVLADGTIIKTKRRPMKSSAGYNLNHLFCGSEGTLGLVTEITLKLHTVPEQTSVAVCAFPTVQDATATATDIIRAGIPVHAIELMDDVQMMCVNRAGYTSRKWDEKPTVMFKFSGSKAYVNEQIQQAKAIAKLHQGVRFEFANGKEEQHQLWSARKEALWSAMAVGPPNGKVYSTDVAVPLSRLADLVMNTKKDLVESGLFGACLGHVGDGNFHACIIYDEKDYEKARKVATDIVHKGLELEGTCTGEHGIGAGKVHYLVEELGPDAVQLMRTIKLALDPNELLNPGKIFTKEALEAESH
SIO_010081: AWJ20_36
subclass of: SO_0000673
so part of: AWJ20_36
location: complement(92508..94247)
location: region:92508-94247:-1
so has part: feature:92508-94247:-1:exon

XP_018734290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92508-94247:-1:exon

AWJ20_37
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DSK2
locus tag: AWJ20_37
so part of: sequence
location: complement(<94768..>95985)
location: region:94768-95985:-1
so has part: feature:94768-95985:-1:exon
subclass of: SO_0000010

30035749
type: Gene
SIO_000068: ncbigene

position:94768:-1
position: 94768
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:95985:-1
position: 95985
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94768-95985:-1:exon

AWJ20_37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DSK2
locus tag: AWJ20_37
product: Dsk2p
transcript id: XM_018880727.1
SIO_010081: AWJ20_37
subclass of: SO_0000673
so part of: AWJ20_37
location: complement(<94768..>95985)
location: region:94768-95985:-1
so has part: feature:94768-95985:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94768-95985:-1:exon

AWJ20_37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DSK2
locus tag: AWJ20_37
inference: similar to AA sequence:KEGG_Orthology:K04523
note: Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; protein abundance increases in response to DNA replication stress; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IC] [PMID 8070654]; GO_function: GO:0030674 - protein binding, bridging [Evidence IMP,IPI] [PMID 11805328]; GO_process: GO:0030433 - ER-associated ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 15167887]; GO_process: GO:0030474 - spindle pole body duplication [Evidence IGI] [PMID 8070654]
codon start: 1
product: Dsk2p
translation: MSDTAGSSTENIDVVIKSSSDKKYTLSLPISTRIEELKAQLAQQSDIPADRQRLIFAGRVLKDNETLEFYKIKSGQTIHLVKGAAPPGSTSGTASGASTTGASATGSSPSSNSSNSTASQVPGNIAAGAGSGNLLADLTGARYAGLAQLPSASMFGPDGGMGAGANSEQLLNLMEEPGFAQHMQQALQNPAIVDLMINSNPQLRQMGPQFRQMLQSPEFVQMMSNPQTIRTMMQMERMFGGAGAGAGGAGANSFPAPGSTDNNGSTTTDSTASSDTSANAGTGAGANPFGGLFPNGQTPDVSANPFAALLNPQRHANAAAAAGGADNASTNQFNQFNPALLASLLGGNAPAPEPQDDRPPEERYESQLRQLNELGFFDFDRNVRALRRSGGNVQGAVEALLDGQV
SIO_010081: AWJ20_37
subclass of: SO_0000673
so part of: AWJ20_37
location: complement(94768..95985)
location: region:94768-95985:-1
so has part: feature:94768-95985:-1:exon

XP_018734291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94768-95985:-1:exon

AWJ20_38
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_38
so part of: sequence
location: complement(<96526..>96597)
location: region:96526-96597:-1
so has part: feature:96526-96597:-1:exon
subclass of: SO_0000663

30035860
type: Gene
SIO_000068: ncbigene

position:96526:-1
position: 96526
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:96597:-1
position: 96597
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96526-96597:-1:exon

AWJ20_38
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_38
product: tRNA-Arg
SIO_010081: AWJ20_38
subclass of: SO_0000673
so part of: AWJ20_38
location: complement(<96526..>96597)
location: region:96526-96597:-1
so has part: feature:96526-96597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96526-96597:-1:exon

AWJ20_39
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MAK21
locus tag: AWJ20_39
so part of: sequence
location: complement(<96976..>100074)
location: region:96976-100074:-1
so has part: feature:96976-100074:-1:exon
subclass of: SO_0000010

30035971
type: Gene
SIO_000068: ncbigene

position:96976:-1
position: 96976
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:100074:-1
position: 100074
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96976-100074:-1:exon

AWJ20_39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MAK21
locus tag: AWJ20_39
product: Mak21p
transcript id: XM_018880938.1
SIO_010081: AWJ20_39
subclass of: SO_0000673
so part of: AWJ20_39
location: complement(<96976..>100074)
location: region:96976-100074:-1
so has part: feature:96976-100074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96976-100074:-1:exon

AWJ20_39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MAK21
locus tag: AWJ20_39
inference: similar to AA sequence:KEGG_Orthology:K14832
note: Constituent of 66S pre-ribosomal particles; required for large (60S) ribosomal subunit biogenesis; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit; involved in nuclear export of pre-ribosomes; required for maintenance of dsRNA virus; homolog of human CAATT-binding protein; GO_component: GO:0030690 - Noc1p-Noc2p complex [Evidence IPI] [PMID 11371346]; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 23209026]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 23212245]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 23222640]; GO_process: GO:0000027 - ribosomal large subunit assembly [Evidence IMP] [PMID 9786894]; GO_process: GO:0042273 - ribosomal large subunit biogenesis [Evidence IMP] [PMID 23209026]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]
codon start: 1
product: Mak21p
translation: MSAEAPVIALDKLADKVKKISAGKTNDRPKKKDSKDKRAKKDTKDQTKKSENQKPQNEESELNDSLLKEVEALGGSKADLDLINGLDDSGSDSEIEVTVASKPDSKLNNDLSKFMSELGLPSEPEVVEDEETVVNVSSKSTEPTDNAETTPKEKKNKTKEEEKQKKREEKQKKKEEKKKKEEKEKAKAKEAAVSQTRTEKAAVPAPQSILEKKSTNNSRGVISNEIINHAKYIHPGQLVLEPRTEWYSHDLEPPAEESTLDQDQINVLFSKAKALLQKENDIYVHDNIKSTSQKQFLSQLLTAGTLSDKISALTLLIQESPIHSVKYFDTMIGLCRKKSRGSALQAVAALKDIFISGVLPNRKLKWFKNQPLTASTPVSWLIIWAFEDWLKQYFFTLLQALETLSHDPVVFIRSNAVLHIIDLLKAKPEQEVNLLRLGVNKLGDSDRKVASRVSYLLLQLEQAHPAMKGIVVESISELVFRTGTDYHARYYSVITLNQTILAHKDTEVANNLIKIYLSLFERLLAEWDRDSGRIKPEEPAKKVKKPRWKNKGNKGKHGGERQEAKTTEAVKEEENAKITSAILTGLNRAYPFSALPKDVFDTHIDTLYRVTHSANFNTSVQALMLIFQISKSEQRLTDRYYRTLYESLLDPRLATSSKLRLYLNLLFKSLREDTNTARIKAFAKRLLQMSSSWLSIGVVAAVIFLVNELFKLRDIKDIISEETKESEKIYDGRARDPLYSNSENSKLWEIIPLSNHFHPTVVVYALGLLNNDPSLAKPDLDLHSFSHFLDRFVYKNPRQKTTSKGGSIMQPLAGADPNGFLGIGGSSKSAVNSIDWKNTNLEDVDASERFFHQYFANRREKAAKSEKIEGELSDNEDEVWDALVNSRPDIEGEDAEDEDLSGFSDEDLSDGDLSDMSIDDEDLDEEDLEDDEKSADEDDAEGEDSDAEPLTLDDFDDVDGLIGSDEEVDENDSEEEEEEEEEEEDKQVGSKKRALERPEGKKSKKAKLKDLPVFASVDDYAQYLDSSDEDYS
SIO_010081: AWJ20_39
subclass of: SO_0000673
so part of: AWJ20_39
location: complement(96976..100074)
location: region:96976-100074:-1
so has part: feature:96976-100074:-1:exon

XP_018734292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96976-100074:-1:exon

AWJ20_40
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MBP1
locus tag: AWJ20_40
so part of: sequence
location: complement(<100553..>103243)
location: region:100553-103243:-1
so has part: feature:100553-103243:-1:exon
subclass of: SO_0000010

30036083
type: Gene
SIO_000068: ncbigene

position:100553:-1
position: 100553
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:103243:-1
position: 103243
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100553-103243:-1:exon

AWJ20_40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MBP1
locus tag: AWJ20_40
product: transcription factor MBP1
transcript id: XM_018881045.1
SIO_010081: AWJ20_40
subclass of: SO_0000673
so part of: AWJ20_40
location: complement(<100553..>103243)
location: region:100553-103243:-1
so has part: feature:100553-103243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100553-103243:-1:exon

AWJ20_40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MBP1
locus tag: AWJ20_40
inference: similar to AA sequence:KEGG_Orthology:K06647
codon start: 1
product: transcription factor MBP1
translation: MKRQSDGWVNATHILKVANFDKPQRTRILEREVQRGTHEKIQGGYGKYQGTWVPLERARAVAEQYKVLEILEPLFAYSPSDTDPTPFAPRHTWKSRSTNGAAGRGGGVAGTPSGRADFTPITARRGASRQSSSASASNIADAGIEDTSLVDNGLKRPYRVLSSGRGGANNGGDGQGAVEGNMLAPPVKKRRGRPPSSSSASLAKRSDSGPRKFHYGIPPSTPKQNIISSKSVNSARYDGNNETLSPESSSISSRSSSPSDFMSESDIDAALTNGVDTPSARNAILASKRRTPSMITDSPQFNYNGYEQRQYTIPDRYQDSPQQSMSGAGNHSMLHSSIQPHHQNLQHQQAEHQRQMQQQHPQQGHQRNISTASTSSEMLSTMYSNRLLDYFTSIDEAEIPQFLINPPPEFKINQVIDDEGHTAFHWACSMGDLKIIEVLLQAGANISATNFAEQTPLIRSILFTNNYDRRTFPKVVDLLRDTILYVDSHKQTVLHHIASTTSSRSKLSSTRYYTEIILAKLLEIKSLQVVTDFVNLQDENGDTALHIAARNGARKCVKVLFHYNARADIVNNNGRTTQEYISEYEAQRQQLLKQADGLVQVKSNTLPGQISSNGQAAVNGYGQSNGTPSNKYMLGKPNSNRELNAAPSQFDSNYRDINGSGSGEANGNANGTVYPAIGNPHVSEVAISATQRVAPSIIEGLEELALAYDSELQEKDSDIEQVRHLLESMKREITETENAIEEIGELPGDEQVVQARLQQSNELVNQRAMHLRKLLERTQSRDLAMLVQAEEDRAGAELQTREPTLNGTATTAPSEVDPKEEVLSLASTLADLQKRRGKLVDEIVELCASAGAGEKMNDYRRLVSLSCGVKVEEIDELLDGIAQALLADGGGSDGDD
SIO_010081: AWJ20_40
subclass of: SO_0000673
so part of: AWJ20_40
location: complement(100553..103243)
location: region:100553-103243:-1
so has part: feature:100553-103243:-1:exon

XP_018734293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100553-103243:-1:exon

AWJ20_41
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: EMP70
locus tag: AWJ20_41
so part of: sequence
location: complement(<106800..>108671)
location: region:106800-108671:-1
so has part: feature:106800-108671:-1:exon
subclass of: SO_0000010

30036194
type: Gene
SIO_000068: ncbigene

position:106800:-1
position: 106800
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:108671:-1
position: 108671
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106800-108671:-1:exon

AWJ20_41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: EMP70
locus tag: AWJ20_41
product: Emp70p
transcript id: XM_018881154.1
SIO_010081: AWJ20_41
subclass of: SO_0000673
so part of: AWJ20_41
location: complement(<106800..>108671)
location: region:106800-108671:-1
so has part: feature:106800-108671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106800-108671:-1:exon

AWJ20_41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: EMP70
locus tag: AWJ20_41
inference: similar to AA sequence:KEGG_Orthology:K17086
note: Protein with a role in cellular adhesion and filamentous growth; also endosome-to-vacuole sorting; similar to Tmn3p; member of Transmembrane Nine family of proteins with 9 transmembrane segments; EMP70 has a paralog, TMN2, that arose from the whole genome duplication; GO_component: GO:0005768 - endosome [Evidence IEA]; GO_component: GO:0005768 - endosome [Evidence IDA] [PMID 8314797]; GO_component: GO:0010008 - endosome membrane [Evidence IEA]; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IDA] [PMID 20681974]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006878 - cellular copper ion homeostasis [Evidence IGI,IMP] [PMID 20681974]; GO_process: GO:0016197 - endosomal transport [Evidence IMP] [PMID 20526336]; GO_process: GO:0001403 - invasive growth in response to glucose limitation [Evidence IMP] [PMID 18178563]; GO_process: GO:0007124 - pseudohyphal growth [Evidence IGI] [PMID 18178563]; GO_process: GO:0007034 - vacuolar transport [Evidence IGI] [PMID 20526336]
codon start: 1
product: Emp70p
translation: MLLASSGVHGFYLPGVAPTDYEKDERVPLFVNSMTPSNFYGSANGLTSVVPYDYYFRAFHFCQPEGGPKRQSESLGSILFGDRIFNSPFELYMLKNETCKTLCTAKYPFRDTLFVIRKIWSEYNFNWLIDGLPAAHEVQDESTGTSFYSAGFPLGSANYEKEEFFIHNHYDIKIEYHQALSGKYRVVGVTVEPASRENKPDEKGNVFCKVDDKPFMLHETESTDTDTEVPYTYSVTWIPSSTSWATRWDKYLHVYDANIHWFSLLNSAIIVVFLTMIVSGILLRAIRKDIARYNEIDLSEDIQEDSGWKLVHGDVFRPPKQKMLLSVFLGSGSQLLAMTLVTLVFALFGFISPSNRGSLSTVMILFYTFFGIIGGYVSARAYKTFGGESWKLNLILTPVVVPGIVFVAFILLNFLLIFAKSSGAVPIGTMIALIAMWFIISAPLSVVGGFLGTKREAYEAPVRTNQIPRQIPTQPTYLRPVPSILLAGILPFCAIFVELYFILSSIWFHKIYYMFGFLFLCFTIMVVTSSTVTVLMIYFTLCAENYNWQWRSFILSGSASIYIFLHSIIYLVSKLSLGGFISNGLYLGYSLLISFVFFILTGTVGFIASFFFVRKIYSSIKID
SIO_010081: AWJ20_41
subclass of: SO_0000673
so part of: AWJ20_41
location: complement(106800..108671)
location: region:106800-108671:-1
so has part: feature:106800-108671:-1:exon

XP_018734294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106800-108671:-1:exon

AWJ20_42
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TRS85
locus tag: AWJ20_42
so part of: sequence
location: <109594..>111672
location: region:109594-111672:1
so has part: feature:109594-111672:1:exon
subclass of: SO_0000010

30036305
type: Gene
SIO_000068: ncbigene

position:109594:1
position: 109594
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:111672:1
position: 111672
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109594-111672:1:exon

AWJ20_42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TRS85
locus tag: AWJ20_42
product: Trs85p
transcript id: XM_018881260.1
SIO_010081: AWJ20_42
subclass of: SO_0000673
so part of: AWJ20_42
location: <109594..>111672
location: region:109594-111672:1
so has part: feature:109594-111672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109594-111672:1:exon

AWJ20_42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TRS85
locus tag: AWJ20_42
note: Component of transport protein particle (TRAPP) complex III; TRAPPIII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating endosome-Golgi traffic and required for membrane expansion during autophagy and the CVT pathway; directs Ypt1p to the PAS; late post-replication meiotic role; GO_component: GO:0005794 - Golgi apparatus [Evidence IDA] [PMID 23986483]; GO_component: GO:1990072 - TRAPPIII protein complex [Evidence IDA] [PMID 20375281]; GO_component: GO:0031410 - cytoplasmic vesicle [Evidence IDA] [PMID 23129774]; GO_component: GO:0000407 - pre-autophagosomal structure [Evidence IEA]; GO_component: GO:0000407 - pre-autophagosomal structure [Evidence IDA] [PMID 20375281]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0032258 - CVT pathway [Evidence IMP] [PMID 16874038]; GO_process: GO:0032258 - CVT pathway [Evidence IMP] [PMID 20375281]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IGI] [PMID 10727015]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IMP] [PMID 11239471]; GO_process: GO:0000045 - autophagic vacuole assembly [Evidence IMP] [PMID 23129774]; GO_process: GO:0006914 - autophagy [Evidence IEA]; GO_process: GO:0016236 - macroautophagy [Evidence IMP] [PMID 16079147]; GO_process: GO:0016236 - macroautophagy [Evidence IMP] [PMID 16874038]; GO_process: GO:0016236 - macroautophagy [Evidence IMP] [PMID 20375281]; GO_process: GO:0007126 - meiotic nuclear division [Evidence IEA]; GO_process: GO:0007126 - meiotic nuclear division [Evidence IMP] [PMID 8619313]; GO_process: GO:0030242 - peroxisome degradation [Evidence IMP] [PMID 16079147]; GO_process: GO:0030242 - peroxisome degradation [Evidence IMP] [PMID 16874038]; GO_process: GO:0034727 - piecemeal microautophagy of nucleus [Evidence IMP] [PMID 18701704]; GO_process: GO:0034497 - protein localization to pre-autophagosomal structure [Evidence IMP] [PMID 20375281]; GO_process: GO:0034497 - protein loca…
codon start: 1
product: Trs85p
translation: MDQETSTSPSEGAQSIPLACKDIVSKAFSPNVSISVSSDVNDVARDMGLDSFVNLLRPFGDRISGRITVCDSQAASVSFDDFAIRFSVGTGSDVTGSNGTNVADVTQETESTGTTSPTGASTSVATGSGITTPAHQLPQLFNNDELESYLANRLQSFADKGVKLTPQLSQELYLDFFKRILTPLSSIPPFETFNHPVTGVIAVSSRNEQPIETLSLLYNRSHDPQLVHDYINKDYLRYYVLVHDETTGDLDKSIALFEKMKRNFGLHCHMIRINRDTTSVDEASIMKLDQPEWQSLQQLQSANTGQESQLDTSHYIHKEDYESLQQFVREMVVQSVLPFMERCIATWNDQVASSRRGITGRFFSASKKYFSSSTRATSSILSTASGSSPFYFSLGGSGASTPASRSPTPPTRTISSPNYPASSSKFSYNYLTPEAQIRKLADFAFMLRDYKFAYTTYDLLKRDYHNDKAWSYLAGCEEMAAISYLMTAESLPPKQRVDIIDSLLDSSTYSYISRCSLPSYALRSILISSELLCTLNTPSAASDGATKWVLKALNERLVGRLGYAMLMERISGAYSAYDSVADRFVNPPGLAKGTPINASSVSLIQGAPDRSSTPASITSTNSNTSKIIASSTVRTSRTRKAAFWQLLAAREWNDANVKEKSIYCIDQANSLIYNELDWAHRPTGLLHRLQES
SIO_010081: AWJ20_42
subclass of: SO_0000673
so part of: AWJ20_42
location: 109594..111672
location: region:109594-111672:1
so has part: feature:109594-111672:1:exon

XP_018734295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109594-111672:1:exon

AWJ20_43
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FOL1
locus tag: AWJ20_43
so part of: sequence
location: complement(<112903..>115359)
location: region:112903-115359:-1
so has part: feature:112903-115359:-1:exon
subclass of: SO_0000010

30036416
type: Gene
SIO_000068: ncbigene

position:112903:-1
position: 112903
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:115359:-1
position: 115359
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112903-115359:-1:exon

AWJ20_43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FOL1
locus tag: AWJ20_43
product: trifunctional dihydropteroate synthetase/dihydrohydroxymethylpterin pyrophosphokinase/dihydroneopterin aldolase FOL1
transcript id: XM_018881367.1
SIO_010081: AWJ20_43
subclass of: SO_0000673
so part of: AWJ20_43
location: complement(<112903..>115359)
location: region:112903-115359:-1
so has part: feature:112903-115359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112903-115359:-1:exon

AWJ20_43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FOL1
locus tag: AWJ20_43
inference: similar to AA sequence:KEGG_Orthology:K13939
note: Multifunctional enzyme of the folic acid biosynthesis pathway; has dihydropteroate synthetase, dihydro-6-hydroxymethylpterin pyrophosphokinase, and dihydroneopterin aldolase activities; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 8813764]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005740 - mitochondrial envelope [Evidence IDA] [PMID 15169867]; GO_component: GO:0031966 - mitochondrial membrane [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA,IEA]; GO_function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IDA] [PMID 15169867]; GO_function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence ISS] [PMID 9234673]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA,IEA]; GO_function: GO:0004150 - dihydroneopterin aldolase activity [Evidence ISS] [PMID 11752249]; GO_function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IDA] [PMID 15169867]; GO_function: GO:0004156 - dihydropteroate synthase activity [Evidence IEA,IEA]; GO_function: GO:0004156 - dihydropteroate synthase activity [Evidence IMP] [PMID 11731153]; GO_function: GO:0004156 - dihydropteroate synthase activity [Evidence IDA] [PMID 15169867]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: …
codon start: 1
product: trifunctional dihydropteroate synthetase/dihydrohydroxymethylpterin pyrophosphokinase/dihydroneopterin aldolase FOL1
translation: MKTHNPSQKDLVFVRELFIKAITGVDAWHRPQPQPVLVSIWLHTDVAEAGSTDHLTYSLNYDVISRNVTRNIESGKFRSLEQIASNVAEVVLADSTGGQWATIHVKKPRALLRAESSEIIISRRKVSTADGGYKIVTTPGTTDVVKIHKLQLVTIIGVNTIERLHRQNVILDLTLYKPTLEGSHTSTANAVAADADSTVASLSQDNNGTGSAPTPTATFNKHYDFRQVVDTVSNHVEDSSYKTVEAFVTSVAKVICKTCGVEKATVRAEKPSAITFAEAAGVEITRTRDSFTDDEPEPLESDNIAGTNASSVAASAAGTTTPRSIPASGTATPLFPQSGTETLSVADAIHNVYLAFGSNEGDPIANIEQSRHELAKRNINVIATSSLYLSEPMFVADQNKFYNGVFHCQTKLAPLDLLDSIKDIESNALGRVKLMDNGPRTIDLDILLYDDLVMNHPRLNIPHIGMLSRSFVLQPLVELVPSDALHPLTAETYRAHLDQIPSTSDVQSSSQLVTCIPLPHSAGNLEYDPVNHTRSTDIMAIINVTPDSFSDGGKVNLDNIVETACTFVKQGAKILDVGGMSTNPKSVDPGSAEELSRIVPAIKALRACPDLAHIPISIDTYRSEVAEAALEAGANIINDISAGVLDPVILEVAVKYKCPIILNHTRGSPQEMTKLAHYSIPDSQVKDDSDEAVVEIVGRELEDRVNDCVSAGLARWQIILDPGLGFAKNINHNLAIIRNLELLRSREAFTGLVWLLGPSRKRFIGTITGRQEAADRILGTAATVTSLIAGGSDIVRVHDVPEMADVVKMADAIHRNVY
SIO_010081: AWJ20_43
subclass of: SO_0000673
so part of: AWJ20_43
location: complement(112903..115359)
location: region:112903-115359:-1
so has part: feature:112903-115359:-1:exon

XP_018734296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112903-115359:-1:exon

AWJ20_44
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_44
so part of: sequence
location: <118444..>120015
location: region:118444-120015:1
so has part: feature:118444-120015:1:exon
subclass of: SO_0000010

30036527
type: Gene
SIO_000068: ncbigene

position:118444:1
position: 118444
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:120015:1
position: 120015
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118444-120015:1:exon

AWJ20_44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_44
product: hypothetical protein
transcript id: XM_018881465.1
SIO_010081: AWJ20_44
subclass of: SO_0000673
so part of: AWJ20_44
location: <118444..>120015
location: region:118444-120015:1
so has part: feature:118444-120015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118444-120015:1:exon

AWJ20_44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_44
codon start: 1
product: hypothetical protein
translation: MPNLSTPASRHTPILTPKVMAITVVMAMAIFGLLINRHSTMTAAQIPVLMPMSAVITSPGRNISIPARPAAFGPMFPSKIKGDQPDNDNGDNEGSGDHGGDGDSELGGFTGSLSVVHSFACGSGQEGQGQYDEDYEDLREKIALVQRGGCGFYEKVLTLQSWGAVAVIVGDNFYHRGLVTMYTRDEFDSAQIPSAFVSRESYDTLSGLDTITITRLPDSAPMMNTVVFLMVSPLCSLSIIYGILLFHRRYRLMKERAPKSLVDSLPTRIWQSYNATDEEDDDETSHLIANTHANGNTDEDSAVSSTALSPKSSKGAYDNDMTTNVSNVNSGSLLLAPKKQSSPLSLMISRRASITPPATLGRPEKIWVSSGECIICLEDYVAGTSKVMRLPCNHEFHADCISKWLIYRKKTCPICKHDVTKPPRSATTISTTITGTGSQPGSIDSHSEHDNSIDWNSPPHSNHGNRSTNDNDIPDLSHISTPSPPPRRPNTTTATSDTSLSNETTETTPLKGNINSKPTELLP
SIO_010081: AWJ20_44
subclass of: SO_0000673
so part of: AWJ20_44
location: 118444..120015
location: region:118444-120015:1
so has part: feature:118444-120015:1:exon

XP_018734297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118444-120015:1:exon

AWJ20_45
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YAP3
locus tag: AWJ20_45
so part of: sequence
location: <122886..>123890
location: region:122886-123890:1
so has part: feature:122886-123890:1:exon
subclass of: SO_0000010

30036638
type: Gene
SIO_000068: ncbigene

position:122886:1
position: 122886
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:123890:1
position: 123890
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122886-123890:1:exon

AWJ20_45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YAP3
locus tag: AWJ20_45
product: Yap3p
transcript id: XM_018881575.1
SIO_010081: AWJ20_45
subclass of: SO_0000673
so part of: AWJ20_45
location: <122886..>123890
location: region:122886-123890:1
so has part: feature:122886-123890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122886-123890:1:exon

AWJ20_45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YAP3
locus tag: AWJ20_45
note: Basic leucine zipper (bZIP) transcription factor; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IPI] [PMID 9372930]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IDA] [PMID 9372930]; GO_process: GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA] [PMID 9372930]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA,IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Yap3p
translation: MSAFYYDQTALQAPYQKPPAPLPSATEFTLPHDPADPANLDWVECDKILSSSHGNPGVGSPNDPSPSHSLHSLNNNSSNAQFFINPLMPSPESSESGQSTIAPIGNGSYSSALKPEDEIMNGTSGGMHLTGAPVDDSEVKRKAQNRAAQRAFRERKEQRVRELEIKLAESEEVVKKLTQENQKLTQENTVLKTENQVLRNSHHSNLQTAGSNGPPAPQQATFPSHQFYASLLEGHEDGSSNDPGSPGTGEVQPSYIVYERNHGETMLGAGTVWQMLMEDPVMSAEDVDISFVVQYIKDKAVCDGYGPVYPLREVHEGIRLAKAEKAKSEKAKIL
SIO_010081: AWJ20_45
subclass of: SO_0000673
so part of: AWJ20_45
location: 122886..123890
location: region:122886-123890:1
so has part: feature:122886-123890:1:exon

XP_018734298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122886-123890:1:exon

AWJ20_46
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TPO1
locus tag: AWJ20_46
so part of: sequence
location: complement(<124269..>126014)
location: region:124269-126014:-1
so has part: feature:124269-126014:-1:exon
subclass of: SO_0000010

30036749
type: Gene
SIO_000068: ncbigene

position:124269:-1
position: 124269
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:126014:-1
position: 126014
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124269-126014:-1:exon

AWJ20_46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TPO1
locus tag: AWJ20_46
product: Tpo1p
transcript id: XM_018881681.1
SIO_010081: AWJ20_46
subclass of: SO_0000673
so part of: AWJ20_46
location: complement(<124269..>126014)
location: region:124269-126014:-1
so has part: feature:124269-126014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124269-126014:-1:exon

AWJ20_46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TPO1
locus tag: AWJ20_46
inference: similar to AA sequence:KEGG_Orthology:K08157
note: Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; catalyzes uptake of polyamines at alkaline pH and excretion at acidic pH; during oxidative stress exports spermine, spermidine from the cell, which controls timing of expression of stress-responsive genes; phosphorylation enhances activity and sorting to the plasma membrane; GO_component: GO:0033101 - cellular bud membrane [Evidence IDA] [PMID 13679573]; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IMP] [PMID 11171066]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 12562762]; GO_component: GO:0005886 - plasma membrane [Evidence IDA,IMP] [PMID 15637075]; GO_function: GO:0015297 - antiporter activity [Evidence IEA]; GO_function: GO:0015606 - spermidine transmembrane transporter activity [Evidence IMP] [PMID 11171066]; GO_function: GO:0015606 - spermidine transmembrane transporter activity [Evidence IDA,IMP] [PMID 15637075]; GO_function: GO:0000297 - spermine transmembrane transporter activity [Evidence IMP] [PMID 11171066]; GO_function: GO:0000297 - spermine transmembrane transporter activity [Evidence IDA,IMP] [PMID 15637075]; GO_function: GO:0000297 - spermine transmembrane transporter activity [Evidence IMP] [PMID 9920864]; GO_process: GO:1902047 - polyamine transmembrane transport [Evidence IMP] [PMID 24136413]; GO_process: GO:0015847 - putrescine transport [Evidence IMP] [PMID 9920864]; GO_process: GO:0015848 - spermidine transport [Evidence IMP] [PMID 11171066]; GO_process: GO:0015848 - spermidine transport [Evidence IDA,IMP] [PMID 15637075]; GO_process: GO:0015848 - spermidine tra…
codon start: 1
product: Tpo1p
translation: MSETSHSAPPSTESAGFEKGFDKEQGEFEPKPMAEDSDIENSGAAAPQKFYGGDRDVESQRRLSRTSTNISEEANVETDYIARVLTGGSRRSNRPTPNMGGGKDYPPLLNYDKDLYKVEFDGPDDPMHPHNWPLKKKLPICAALGFTTFTVAWGSAIFASAVEVVAAKYHVSVTVGILCVSLYVMGFASGPILWAPLSEVYGRKIPSVISIFGFMLFSFAAATSKDFQTLILCRFFGGFFGAAPLAVVAAAFADMFGNEMRGTAISIFSLMVFCGPLLAPVVGGFIVNSYLGWRWTEYITGIMAAVALLSCVFLYEETYHPMILVQKAKLIRKATGNQLVYAPHEQVEIDMAELVTKNLTRPIVMTVTEPIIFLISLYTAFIYGILYLCLEAYPIIFSGYKMKGGIVELPYLGLLVGCVVGGFVIALFFEPQYNKKLAANNGKPVPEARLPPMIAGGIAFPIGIFWLTWTGNYPESVHWAAPAVSGLFTGFGLICVFLPAINYIVDSYLFFAASALAGNTFMRSSFGAAFPLFAIQMFHNLGINWAGTLIGCLAVVLIPVPVLFYIYGKKLRQKSKFAFDL
SIO_010081: AWJ20_46
subclass of: SO_0000673
so part of: AWJ20_46
location: complement(124269..126014)
location: region:124269-126014:-1
so has part: feature:124269-126014:-1:exon

XP_018734299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124269-126014:-1:exon

AWJ20_47
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SNF1
locus tag: AWJ20_47
so part of: sequence
location: <129232..>131217
location: region:129232-131217:1
so has part: feature:129232-131217:1:exon
subclass of: SO_0000010

30036859
type: Gene
SIO_000068: ncbigene

position:129232:1
position: 129232
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:131217:1
position: 131217
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129232-131217:1:exon

AWJ20_47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SNF1
locus tag: AWJ20_47
product: AMP-activated serine/threonine-protein kinase catalytic subunit SNF1
transcript id: XM_018881788.1
SIO_010081: AWJ20_47
subclass of: SO_0000673
so part of: AWJ20_47
location: <129232..>131217
location: region:129232-131217:1
so has part: feature:129232-131217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129232-131217:1:exon

AWJ20_47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SNF1
locus tag: AWJ20_47
inference: similar to AA sequence:KEGG_Orthology:K12761
note: AMP-activated serine/threonine protein kinase; found in a complex containing Snf4p and members of the Sip1p/Sip2p/Gal83p family; required for transcription of glucose-repressed genes, thermotolerance, sporulation, and peroxisome biogenesis; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; regulates filamentous growth in response to starvation; SUMOylation by Mms21p inhibits its function and targets Snf1p for destruction via the Slx5-Slx8 Ubiquitin ligase; GO_component: GO:0031588 - AMP-activated protein kinase complex [Evidence IDA] [PMID 12393914]; GO_component: GO:0031588 - AMP-activated protein kinase complex [Evidence IDA,IPI] [PMID 2481228]; GO_component: GO:0031588 - AMP-activated protein kinase complex [Evidence IPI] [PMID 9121458]; GO_component: GO:0005737 - cytoplasm [Evidence IPI] [PMID 11331606]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 17237508]; GO_component: GO:0000324 - fungal-type vacuole [Evidence IPI] [PMID 11331606]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005641 - nuclear envelope lumen [Evidence IDA] [PMID 17237508]; GO_component: GO:0031965 - nuclear membrane [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IPI] [PMID 11331606]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 17237508]; GO_function: GO:0004679 - AMP-activated protein kinase activity [Evidence IMP] [PMID 11486005]; GO_function: GO:0004679 - AMP-activated protein kinase activity [Evidence IMP] [PMID 2557546]; GO_function: GO:0004679 - AMP-activated protein kinase activity [Evidence IMP] [PMID 7913470]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004672 - …
codon start: 1
product: AMP-activated serine/threonine-protein kinase catalytic subunit SNF1
translation: MSVPSAPPPHAGGHGNADVMPSFGHEGGSAGRIGRYQIIKTLGEGSFGKVKLAYHMATHARVALKIINRKTLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIVMVIEFAGNELFDYIVQRGKMREDEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEDLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCGRLPFDDEFIPVLFKKISGGVYTIPNFLSPGAKHLLQRMLVVNPLNRITVQEIIEDPWFKVGIASYLLPPVEQDDGNEDHKEGNDSKTATEKVDDGIVASLGKTMGYDKEQVYEALKSSDDNGSEIRDAYYLLKDNHQASGDIHFKKDDIDRYLSEHPEDADDLKQPFSRTSTPVLAATASSPGTPVSSSGKPYGRGNPPTLTFDKRFQGGVAIDSNSLTTPHTTIAILPTSLPAYHRANMIAEGIQPSKKLNPISTKKSKTRWHFGIRSRSYPLDVMGEIYRALRNLGAEWAKPVDDDLWTIHVRWKCGLPLKQSLSNSCSGITTSGESTPQTTAVNSGDVTPTEANNNTDTSVTPRETPKTELMKMRIQLYQLEQNNYLVDFKFDGWENPDGTAHPKGAAAPIPEFDSFSAYPFLHLATKLIMELAVNSQA
SIO_010081: AWJ20_47
subclass of: SO_0000673
so part of: AWJ20_47
location: 129232..131217
location: region:129232-131217:1
so has part: feature:129232-131217:1:exon

XP_018734300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129232-131217:1:exon

AWJ20_48
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_48
so part of: sequence
location: complement(<131400..>132899)
location: region:131400-132899:-1
so has part: feature:131400-132899:-1:exon
subclass of: SO_0000010

30036970
type: Gene
SIO_000068: ncbigene

position:131400:-1
position: 131400
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:132899:-1
position: 132899
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131400-132899:-1:exon

AWJ20_48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_48
product: hypothetical protein
transcript id: XM_018881894.1
SIO_010081: AWJ20_48
subclass of: SO_0000673
so part of: AWJ20_48
location: complement(<131400..>132899)
location: region:131400-132899:-1
so has part: feature:131400-132899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131400-132899:-1:exon

AWJ20_48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_48
codon start: 1
product: hypothetical protein
translation: MKFIADEETKLYVGDAFSLLGILASYDKLEGLNPYQVRFADFVDDATMLRIIRASGGAWSINLSKYSSPASKAYLLGPEAGSAGIGGTIASWIGGGLGELGGLIWRRGSTGTEEHVSGTDETSPSALDEDLPHPTMSLLLPVYEFIQANKVFRRLLVETPASDNRSGSISGKDNVGAANSTSSSSARNKSPPPFVLFISLCSYLLQNQHKTLRAASYARLSLLILRIFAEDSAIVSKQLVSEELQTHISLCRLRNPALPLVTGKTTLLNGIMDSLLGCIRFNMKRTIDYDMYNLTLTVLFQVIASLRSTKTRTTYHWSEVWKSIISLIKFLNTHPPSGGSGSSKQAQEASETADLAVLIIAALLIHGENILPDNHEHDDLFYRVVESTDEFSKLKRLYSLEKSPSMAVITATTSHYASLLEPAKTKSLSPEQVAQTIKQGYQSLSLFQYASESSNEPTKKTLLYDSLPTYKESEQRLFLKKITRTAINDTQLLYQSANF
SIO_010081: AWJ20_48
subclass of: SO_0000673
so part of: AWJ20_48
location: complement(131400..132899)
location: region:131400-132899:-1
so has part: feature:131400-132899:-1:exon

XP_018734301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131400-132899:-1:exon

AWJ20_49
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HST3
locus tag: AWJ20_49
so part of: sequence
location: <135364..>136401
location: region:135364-136401:1
so has part: feature:135364-136401:1:exon
subclass of: SO_0000010

30037081
type: Gene
SIO_000068: ncbigene

position:135364:1
position: 135364
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:136401:1
position: 136401
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135364-136401:1:exon

AWJ20_49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HST3
locus tag: AWJ20_49
product: Hst3p
transcript id: XM_018882002.1
SIO_010081: AWJ20_49
subclass of: SO_0000673
so part of: AWJ20_49
location: <135364..>136401
location: region:135364-136401:1
so has part: feature:135364-136401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135364-136401:1:exon

AWJ20_49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HST3
locus tag: AWJ20_49
inference: similar to AA sequence:KEGG_Orthology:K11121
note: Member of the Sir2 family of NAD(+)-dependent protein deacetylases; involved along with Hst4p in telomeric silencing, cell cycle progression, radiation resistance, genomic stability and short-chain fatty acid metabolism; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IC] [PMID 12242223]; GO_function: GO:0003677 - DNA binding [Evidence ISS] [PMID 7498786]; GO_function: GO:0070403 - NAD+ binding [Evidence IEA]; GO_function: GO:0004407 - histone deacetylase activity [Evidence IMP] [PMID 16815704]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_process: GO:0006348 - chromatin silencing at telomere [Evidence IGI] [PMID 7498786]; GO_process: GO:0016575 - histone deacetylation [Evidence IMP] [PMID 16815704]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0046459 - short-chain fatty acid metabolic process [Evidence IMP] [PMID 12618394]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Hst3p
translation: MASLRRRILAARSTPTHWFIRHLKERGKLLRCYTQNIDGLEEQEGLLIGGLGYGLETIPIQAAEVVQLHGDINSLKCMSCSTKYSWTPDTEEQLNRGEAPICPNCNQIQEERTSAGKRFTGVGCLRPNIVLYGEEHADGYSIGDCTVKDIKSKPDFLIISGTSLKVVGIRKLVRCMAKAVKEKGGLVILVNMTELGQSMWNDLIDYYIEGQSDAWVADLKIQVPDFFQTQTKITGMSVKKGVPGMVGKLPSFNMPSPPSTPKKVKRPADSSWTSMTPSKHTRMASSSPSKPRTPSTPRVLRTPRTKRIQQGNLSFEVMLQPENRTPLATLSVNRQTARSPTRAGK
SIO_010081: AWJ20_49
subclass of: SO_0000673
so part of: AWJ20_49
location: 135364..136401
location: region:135364-136401:1
so has part: feature:135364-136401:1:exon

XP_018734302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135364-136401:1:exon

AWJ20_50
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: JLP1
locus tag: AWJ20_50
so part of: sequence
location: <137523..>138677
location: region:137523-138677:1
so has part: feature:137523-138677:1:exon
subclass of: SO_0000010

30037193
type: Gene
SIO_000068: ncbigene

position:137523:1
position: 137523
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:138677:1
position: 138677
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137523-138677:1:exon

AWJ20_50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: JLP1
locus tag: AWJ20_50
product: Jlp1p
transcript id: XM_018882110.1
SIO_010081: AWJ20_50
subclass of: SO_0000673
so part of: AWJ20_50
location: <137523..>138677
location: region:137523-138677:1
so has part: feature:137523-138677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137523-138677:1:exon

AWJ20_50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: JLP1
locus tag: AWJ20_50
note: Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase; involved in sulfonate catabolism for use as a sulfur source; contains sequence that resembles a J domain (typified by the E. coli DnaJ protein); induced by sulphur starvation; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0051213 - dioxygenase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0000907 - sulfonate dioxygenase activity [Evidence IDA] [PMID 10482536]; GO_process: GO:0046306 - alkanesulfonate catabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0044273 - sulfur compound catabolic process [Evidence IMP] [PMID 10482536]
codon start: 1
product: Jlp1p
translation: MAPPTTAPVYQLTDKALSPKEIIKGPSTYANTINEGPSVLKNWSGPLKVSGALDTAYKFKEITPAIGREYPDLQLKDVLENEEQLRDLAITISRRGVVFFRNQDITIAQQKKLADQLGKLAGKPETSGLHIHPVAPAGGFLKEGSDEIDEEVSIITSKINNDVYNNARIAFRKSSEKYHTDVNFEPVPADYTTLRIIETPDHGGDTLWASGYSLYDKLSPSLRAYLETLVGTYSQPTFKDSTKGEHGIYSAKRGAPENFGDELIAKHPVVRTNPVTGWKSIFSLGTHFTSFDGLTEDESTLLKTYIHNLLVSSHDIQVRFKWNKNDMAIWDNRSVFHTATNDYPIGAGTVVRTGVRTVSVGERPFFSEKSKSREEDLYENKLLV
SIO_010081: AWJ20_50
subclass of: SO_0000673
so part of: AWJ20_50
location: 137523..138677
location: region:137523-138677:1
so has part: feature:137523-138677:1:exon

XP_018734303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137523-138677:1:exon

AWJ20_51
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_51
so part of: sequence
location: <138819..>139469
location: region:138819-139469:1
so has part: feature:138819-139469:1:exon
subclass of: SO_0000010

30037304
type: Gene
SIO_000068: ncbigene

position:138819:1
position: 138819
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:139469:1
position: 139469
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138819-139469:1:exon

AWJ20_51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_51
product: hypothetical protein
transcript id: XM_018882219.1
SIO_010081: AWJ20_51
subclass of: SO_0000673
so part of: AWJ20_51
location: <138819..>139469
location: region:138819-139469:1
so has part: feature:138819-139469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138819-139469:1:exon

AWJ20_51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_51
codon start: 1
product: hypothetical protein
translation: MSQESDEAKIVHLYKSARALALSPISQAIQLRCFQTSSSKSINLPENAYHQQACPQCCIPWVPGLTVKIRIKLGNSMRTSGGLSKRARKRRQLLLQKKFSNSPPQLERKRALVYDCLVCDNRLVSDLSNKITVRDTGSAENISSVRDIKMELANNTSPLEVVASSALETNSISSAKKRAKERKSKSSLKSLLAKNRDKASTSSTTKLGLSDFFKPG
SIO_010081: AWJ20_51
subclass of: SO_0000673
so part of: AWJ20_51
location: 138819..139469
location: region:138819-139469:1
so has part: feature:138819-139469:1:exon

XP_018734304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138819-139469:1:exon

AWJ20_52
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_52
so part of: sequence
location: complement(<151135..>154011)
location: region:151135-154011:-1
so has part: feature:151135-154011:-1:exon
subclass of: SO_0000010

30037415
type: Gene
SIO_000068: ncbigene

position:151135:-1
position: 151135
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:154011:-1
position: 154011
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151135-154011:-1:exon

AWJ20_52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_52
product: hypothetical protein
transcript id: XM_018882327.1
SIO_010081: AWJ20_52
subclass of: SO_0000673
so part of: AWJ20_52
location: complement(<151135..>154011)
location: region:151135-154011:-1
so has part: feature:151135-154011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151135-154011:-1:exon

AWJ20_52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_52
codon start: 1
product: hypothetical protein
translation: MTVPCTNPAECSGKSIIVTTLPVVPTSTGMGATGYTTMTVSCTNPAECFGSSAIVTTLAVPQSTGATEYATVTLSCTNPSECSGKSVMVTTLPIVPASTEMGATGYTTMTVSCTNPAECSGNSVMVTTIPASQAANPIESGSTGYATVTLSCTNPAECSGKSIIVTTLPIVPTPTEMGATAYTTMTISCTNPAECSGKSIMVTTVPVSQSANPVQAGSTGYATVTTLPIVPASTEMGATDYTTMTVSCTNPAECSGHSVKVTTIAVLQSTGPTEYATVTVSCTNPAECSGKSVMVTTLPIVPTPTEMGATSYTTMTISCTNPAECSGKSIMVTTVPVSQSANPVQAGSTGYATVTVSCTNPAECSGKSIIVTTLPIVPTSAEMGATGYTTMTVSCTNPAECFGSSAIVTTLAVPQSTGATEYATVTVSCTNPAECSGKSVMVTTLPIVPTPTEMGATAYTTMTISCTNPAECSGNSVMVTTIPASQAANPIEAGSTGYATVTVSCTNPAECSGKSIIVTTLPIVPTPTEMGATAYTTMTISCTNPAECSGKSIMVTTVPVSQSANPVQAGSTEYATVTISCTNPAECSGKSIIVTTLPIVPTPTEMGATAYTTMTISCTNPAECSGKSIMVTTVPVSQSANPVQAGSTGYATVTVSCTNPAECSGKSVMVTTLPIVPVSTERGATGYTTMTVSCTNPAECSGSSVLVTTIAMLPSETQTGVAMSSLTVGQYTSYLTKTVPCENSMKCSGKSYMVTTIALVTSMSAEATEVATKTASLAISTSITTIGISEAPGIFPTGVPYTSYSTMTVPCQHPTKCSGKSYIVTTIPIYGTNVPTTSSSIEPSVETSIVSPAGIPYTSYRTETVPCQHPTKCSGRSYVLTTIPIYGTFIPSISESATVTQSVPYTEFISVQNSPVPGEGTTLLTTVTVPCTAKGCTTQQLVTTVTMVLPTPSYPNGK
SIO_010081: AWJ20_52
subclass of: SO_0000673
so part of: AWJ20_52
location: complement(151135..154011)
location: region:151135-154011:-1
so has part: feature:151135-154011:-1:exon

XP_018734305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151135-154011:-1:exon

AWJ20_53
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CAJ1
locus tag: AWJ20_53
so part of: sequence
location: <163382..>164872
location: region:163382-164872:1
so has part: feature:163382-164872:1:exon
subclass of: SO_0000010

30037525
type: Gene
SIO_000068: ncbigene

position:163382:1
position: 163382
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:164872:1
position: 164872
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163382-164872:1:exon

AWJ20_53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CAJ1
locus tag: AWJ20_53
product: Caj1p
transcript id: XM_018882430.1
SIO_010081: AWJ20_53
subclass of: SO_0000673
so part of: AWJ20_53
location: <163382..>164872
location: region:163382-164872:1
so has part: feature:163382-164872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163382-164872:1:exon

AWJ20_53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CAJ1
locus tag: AWJ20_53
inference: similar to AA sequence:KEGG_Orthology:K09527
note: Nuclear type II J heat shock protein of the E. coli dnaJ family; contains a leucine zipper-like motif, binds to non-native substrates for presentation to Ssa3p, may function during protein translocation, assembly and disassembly; GO_component: GO:0005634 - nucleus [Evidence TAS] [PMID 15170475]; GO_function: GO:0051087 - chaperone binding [Evidence ISS] [PMID 8045411]; GO_process: GO:0006457 - protein folding [Evidence ISS] [PMID 8045411]
codon start: 1
product: Caj1p
translation: MSQTETATADSAVTFKEQGNVAYKAGNYQEAVELYGKAIEADPTNPVYYGNRSMALMQLKEYQLALNDTLESNSYGPGVAKTLNRLGKLYTTLGRPDEALQAYSSSDPPASGPEVMYAHEMSRNLVQAEQLLHSENPALGIHSLDAAERYLGAGVKIPRKWTLLRGQLYLASGNIDGATSLVMSLLRSDSQDPDALTLRGKVLYQEGDVSKAVAHFTEALRCDPDNANARKSLKVAKELEKLRTEGNNAFKSGSYAAAKELYTRALQVDPTNKGINSKLYSNRATVNIKLNLIEEALADSDEALLLDPGFVKVKKTRARVLLQLERYEDAVQEFKSAIEMDSADTSLRQELQNAELELKKSKRKDYYKILGVSKTCTETELKKAYRKQALIYHPDKNPDDHTAQEKFKEVGEAYETLSDPQKRARYDSGVDLQDPSDMFGGMGGMGGMGGMGGMGGMGGMGGMGGIDPEILFQMFGGAGGGGRGGHPGFSFSSGGF
SIO_010081: AWJ20_53
subclass of: SO_0000673
so part of: AWJ20_53
location: 163382..164872
location: region:163382-164872:1
so has part: feature:163382-164872:1:exon

XP_018734306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163382-164872:1:exon

AWJ20_54
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YCK2
locus tag: AWJ20_54
so part of: sequence
location: complement(<165416..>166933)
location: region:165416-166933:-1
so has part: feature:165416-166933:-1:exon
subclass of: SO_0000010

30037583
type: Gene
SIO_000068: ncbigene

position:165416:-1
position: 165416
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:166933:-1
position: 166933
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165416-166933:-1:exon

AWJ20_54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YCK2
locus tag: AWJ20_54
product: serine/threonine protein kinase YCK2
transcript id: XM_018882484.1
SIO_010081: AWJ20_54
subclass of: SO_0000673
so part of: AWJ20_54
location: complement(<165416..>166933)
location: region:165416-166933:-1
so has part: feature:165416-166933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165416-166933:-1:exon

AWJ20_54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YCK2
locus tag: AWJ20_54
inference: similar to AA sequence:KEGG_Orthology:K02218
codon start: 1
product: serine/threonine protein kinase YCK2
translation: MSSHIQSSNVVGVHYRVGKKIGEGSFGVIFEGTNLLNNQQVAIKFEPRKSDAPQLRDEYRTYKILVGCLGMPNVYYFGQEGLHNILVIDLLGPSLEDLFDWCGRRFTLKTVVMVAKQMISRVQTIHEKNLIYRDIKPDNFLIGKPGTKNANLVYVVDFGMAKQYRDPKTKQHIPYRERKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGGLPWQGLKAATNKQKYEKIGEKKQTTQIRDLCEGFPEQLEQYLTYVRNLGFEETPDYDYLRDLFTQALKSTGEVEDGEYDWMKLNGGKGWDSATNKKPNLHGYGHPYPPGHNSSNANNNANATANNRHSQVHLSSSRLNAAQPPPPPPNAALIRHASKSRRNTRQSTPGQLQQATTAAQQQLQAQQQALAGQRLSKSGAALGVPANGTGGSIGGSNVAQYQNNSSQILSSNQYAQQGYQSTNQQLQQQSNLGSHQYGHDYQNQQQQQQQQGTEENKGFWAKIGAFCCG
SIO_010081: AWJ20_54
subclass of: SO_0000673
so part of: AWJ20_54
location: complement(165416..166933)
location: region:165416-166933:-1
so has part: feature:165416-166933:-1:exon

XP_018734307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165416-166933:-1:exon

AWJ20_55
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_55
so part of: sequence
location: complement(<177717..>178733)
location: region:177717-178733:-1
so has part: feature:177717-178733:-1:exon
subclass of: SO_0000010

30037594
type: Gene
SIO_000068: ncbigene

position:177717:-1
position: 177717
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:178733:-1
position: 178733
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177717-178733:-1:exon

AWJ20_55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_55
product: hypothetical protein
transcript id: XM_018882495.1
SIO_010081: AWJ20_55
subclass of: SO_0000673
so part of: AWJ20_55
location: complement(<177717..>178733)
location: region:177717-178733:-1
so has part: feature:177717-178733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177717-178733:-1:exon

AWJ20_55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_55
codon start: 1
product: hypothetical protein
translation: MYVLTCQASRAIFIGTVLGLALTVGGIAGLQFYSFRKIQAIQPIPSEWTFQTKLLVQAGVDSEQAQNIEQAAKYYQQAIDVLLGKDKQTDISTKSKQWLTGYADLLIRFGLVQEMLNHRQEAREALEAGYSMPVGTPHVRSKAAIQLGQYSLESNKFSESEKLFVESLKEVASAPILQYLATGPSPVVLPENIVANDYQMAPLIELGKLYVKQKRYQCAFSSFLASLRALRNAKDVFINQSGSGVPLDLHLQNFDVKCNEAIIMSYISEILWKLGKKQDAVIWGEGSYYESFPRSHGVVECRLCAKMVANNLYIMYRNMGMSEQSETFKNIHESLDFD
SIO_010081: AWJ20_55
subclass of: SO_0000673
so part of: AWJ20_55
location: complement(177717..178733)
location: region:177717-178733:-1
so has part: feature:177717-178733:-1:exon

XP_018734308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177717-178733:-1:exon

AWJ20_56
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_56
so part of: sequence
location: <181958..>182758
location: region:181958-182758:1
so has part: feature:181958-182758:1:exon
subclass of: SO_0000010

30037605
type: Gene
SIO_000068: ncbigene

position:181958:1
position: 181958
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:182758:1
position: 182758
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181958-182758:1:exon

AWJ20_56
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_56
product: hypothetical protein
transcript id: XM_018882506.1
SIO_010081: AWJ20_56
subclass of: SO_0000673
so part of: AWJ20_56
location: <181958..>182758
location: region:181958-182758:1
so has part: feature:181958-182758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181958-182758:1:exon

AWJ20_56
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_56
codon start: 1
product: hypothetical protein
translation: MMTSHNRTYNRRERTRLFPPNGDGYTSLDQVKWFFKDSPIPRWSDPLEQLIPASEHIDMDKIVLNHDRRPVESSVSEDESSVAQRTRGKPLARPIEDLMRLDGSEKAIPSPPPAKSDSPVSPAKKEVTKRRLSSRASPLKLNGGKNKRGPKSPSKVTPEAVADNSSSSEDDNDDNKGSDDDSEKESVISHEVIKPKKSYLTQGAYYGIMRRGRLSKGVRDNHVFPLPMLDGLKRMNTEKPFQLPWNIYCPSEDGPKAKWRTLKKSK
SIO_010081: AWJ20_56
subclass of: SO_0000673
so part of: AWJ20_56
location: 181958..182758
location: region:181958-182758:1
so has part: feature:181958-182758:1:exon

XP_018734309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181958-182758:1:exon

AWJ20_57
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_57
so part of: sequence
location: <183394..>188358
location: region:183394-188358:1
so has part: feature:183394-188358:1:exon
subclass of: SO_0000010

30037616
type: Gene
SIO_000068: ncbigene

position:183394:1
position: 183394
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:188358:1
position: 188358
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183394-188358:1:exon

AWJ20_57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_57
product: hypothetical protein
transcript id: XM_018882516.1
SIO_010081: AWJ20_57
subclass of: SO_0000673
so part of: AWJ20_57
location: <183394..>188358
location: region:183394-188358:1
so has part: feature:183394-188358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183394-188358:1:exon

AWJ20_57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_57
codon start: 1
product: hypothetical protein
translation: MQKWYVNGVPRIGLFAGPAYIEAGTELTYDYNFDWFKGAVAQFCHCGSDNCRGVIGKKSSSVSTSRSDDSSVPSSRNGTPITGLNGSKKKNQASVKSTVSRIVKKSVHSAKMKRVTSVNGPASSIARAKYAKQGLRGRKTPYTDSRVSIPVKKGLQLKIRLAKATPLAEADPPRRRPGRPRKDTNISVADSESSAQENVRTRTRSSASVTDSETAKNLKKGKKMVIPRTKPTIVFSSSLVTKRRGRPKKNLSPEPVLPKRRGRPRKEESQSITNTDVSTVKRARSKIGTVSNGEAANIDNSENKRRTRRSGLQPLIDIGNEDNNLLSAEALGFLHPPGITATLMKIRNPKRQFKRKRINTENNLQEEDGMDDENSEDDRPSEKIERGLRSRTVPLVGDLEWKRERRTSQRTQSVPSTGTADRMEISDADIEVEEIGASDDNFNEEIGASDDNFNEEIGDSDDNSIDDNQNDANDEFVAQSIDEDDSSSLSELDSKASNFSDYQLSMDEEVVSDNDDSEVIILDQSPAVDGGKEINSGAKQRGSLLVEEKGMGVQNSELNQDNDADDRLDIRDEEEKNQSLEQLSEMKERTHNETPEMHTNGRQQITIDHDNDHDQNVEGNIDESARIIPKKRGRPPKNRMQSGLPNGDGEAPTQPVRRSTRVVNQPQRFIDMVEAPEPKRKLRNRKIGRPKKNTAVLEFTSLDIGRSRQEQPSHVAMSHSRPETVNNSGDRSNSGSNSGSNSGLDILALAIASTEATSRTPNNVRTIARPSVINRPSHNPVSIGRYYRDDSGSEDDSEDTDGGRAPRSLTASSTPIQIEQRSTSQSSPKTESRGQLRQTHLTEFIGPTANRSRVEDERTGLPAPQEIPKESTETRMTIDEYVSKQALAEKQFIPLDVSSLASRRPYMPVPVPVVDAKDGKQPDGPLIECQVVLPEKLSKELSEHPGSLSSGSSRQAQPSQLPGPPGSTPPNTLVPMTPVPAVTYQVVSSPNGPQMIPQGIPYYSSPMGPPMGVPQMMPQMGPSYPSEMSMPDQQMYPQMGPQMGSQMGPQMGPQMGPQMGPQMGPRMGPQMGTPIGPQMGPHMGPHMGSPMGPPMTAPMGVPMGMPMEQAMGPPMGQPMGQPMGPFVGQPMGQPMGQPVGQPMGPPMGPPMGPPMGPPMGPPMGPMGHPMGQPMGQSMGPYMGQPMGPYYGPSMMPQTGPPVEPMAGHMGPPAGSPSGYPMSMPSNGTQSGPPGTSPSLGAPNSPVDGRRYSSTTRVVSGSPSRNVQPHFPTQIGPNGSSVSYRPDTIPGKSSPSSQLSDGTKVMETSVNTFDNRSENVTTKQDPSQTSSSEEEESSEDENQVASSGHTESTISSSGMPNHVGITSTGNVPANPRMAQFTPLGRSPITSGSTGNSYHPAAPSASQITPSSTSRNKREENRISETHAPINSAAGLVAEYLAKTPTSTSYKPTESTVIGESTPSGSKRTGVMTGTPAKIAPLTNTQNSNNDEEAQLPPMGTFAPPQSQVQPPKGIQTPTRKYTTSIVNKESYSRSKSPPSVHRRRRSSWRDVVGIDVETVENGHSGQNGTGESLPVEVEDSSSEDLSPSSAQPLDVIPNQGYVTTEGGDKNRTAIPRDEQQEIMNTRKILEPGDDLADTAGRFGTRFRRVPKKDLS
SIO_010081: AWJ20_57
subclass of: SO_0000673
so part of: AWJ20_57
location: 183394..188358
location: region:183394-188358:1
so has part: feature:183394-188358:1:exon

XP_018734310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183394-188358:1:exon

AWJ20_58
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: UPS2
locus tag: AWJ20_58
so part of: sequence
location: <191991..>192554
location: region:191991-192554:1
so has part: feature:191991-192554:1:exon
subclass of: SO_0000010

30037627
type: Gene
SIO_000068: ncbigene

position:191991:1
position: 191991
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:192554:1
position: 192554
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191991-192554:1:exon

AWJ20_58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: UPS2
locus tag: AWJ20_58
product: Ups2p
transcript id: XM_018882527.1
SIO_010081: AWJ20_58
subclass of: SO_0000673
so part of: AWJ20_58
location: <191991..>192554
location: region:191991-192554:1
so has part: feature:191991-192554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191991-192554:1:exon

AWJ20_58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: UPS2
locus tag: AWJ20_58
note: Mitochondrial intermembrane space protein; involved in phospholipid metabolism; has role in regulation of phospholipid metabolism by inhibiting conversion of phosphatidylethanolamine to phosphatidylcholine; null mutant has defects in mitochondrial morphology; similar to Ups1p, Ups3p and to human PRELI; UPS2 has a paralog, UPS3, that arose from the whole genome duplication; GO_component: GO:0031314 - extrinsic component of mitochondrial inner membrane [Evidence IDA] [PMID 19506038]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005758 - mitochondrial intermembrane space [Evidence IEA]; GO_component: GO:0005758 - mitochondrial intermembrane space [Evidence IDA] [PMID 19506038]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0032048 - cardiolipin metabolic process [Evidence IGI] [PMID 19506038]; GO_process: GO:0042407 - cristae formation [Evidence IGI,IMP] [PMID 19221197]; GO_process: GO:2001246 - negative regulation of phosphatidylcholine biosynthetic process [Evidence IMP] [PMID 22403410]; GO_process: GO:0046337 - phosphatidylethanolamine metabolic process [Evidence IGI,IMP] [PMID 19221197]
codon start: 1
product: Ups2p
translation: MKIFSTQHTFAYDWEHVSCANWKKYPNEMSTHVVAVDVLRREIDSTTGVLRTERLITCKQAIPSWVLALVGGTDVSYVREVSEVDPKSRSLTLRSVNLTMNQLLTVYETVNYTPDPANPKQATLFNQEAQITAYASFRRLCSKIEDWTVDRFGQNAALGKKGFESVLSQVAQKVQDGVFRENLAKSA
SIO_010081: AWJ20_58
subclass of: SO_0000673
so part of: AWJ20_58
location: 191991..192554
location: region:191991-192554:1
so has part: feature:191991-192554:1:exon

XP_018734311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191991-192554:1:exon

AWJ20_59
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SLM5
locus tag: AWJ20_59
so part of: sequence
location: complement(<193004..>194410)
location: region:193004-194410:-1
so has part: feature:193004-194410:-1:exon
subclass of: SO_0000010

30037638
type: Gene
SIO_000068: ncbigene

position:193004:-1
position: 193004
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:194410:-1
position: 194410
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193004-194410:-1:exon

AWJ20_59
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SLM5
locus tag: AWJ20_59
product: asparagine--tRNA ligase SLM5
transcript id: XM_018882538.1
SIO_010081: AWJ20_59
subclass of: SO_0000673
so part of: AWJ20_59
location: complement(<193004..>194410)
location: region:193004-194410:-1
so has part: feature:193004-194410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193004-194410:-1:exon

AWJ20_59
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SLM5
locus tag: AWJ20_59
inference: similar to AA sequence:KEGG_Orthology:K01893
note: Mitochondrial asparaginyl-tRNA synthetase; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005739 - mitochondrion [Evidence IMP] [PMID 9030748]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IDA] [PMID 9030748]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA,IEA]; GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]; GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IDA] [PMID 9030748]; GO_process: GO:0070145 - mitochondrial asparaginyl-tRNA aminoacylation [Evidence IMP] [PMID 9030748]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]
codon start: 1
product: asparagine--tRNA ligase SLM5
translation: MRTSRAVLASVRTIRSLVESPRLGEDATVNGWVRSVRRMKKVAFADIGDGTSADTLAVVLTPEQSKQLSTGACVQLSGKLSESPGNQKFELQVAEPVPGKPDPVKVLGPADQSYPLQKKFHTAEYLRTIPSFRWKTLGNSSVLRYRSYAQSRIARYFESAGFTQVSSPIITSSDCEGAGEVFTINSGEPDKNQKQPYFFGDKPAYLSVSSQLHLEVYAAALSRVWNMAPAFRAEKSDTNRHLSEFWMVEAELAFTESLKDVMTVAEQMIRAAVPDSAMAIDIIQSNKQSSSTKQETLKQRWQMLSQPKPWARVTYTEAVELLRKEFPSLKWGDSLSSEQEKHLAAHIIQGPVFVTDYPMHQKPFYMKKNAVSDETKATVACFDLLVPEMGELIGGSLREDDHQTLLSAMNDNNMNPDDLEWYLDLRKYGSFPHGGYGMGFERLVCFVCGVENIREAIGFPRWAGSCVC
SIO_010081: AWJ20_59
subclass of: SO_0000673
so part of: AWJ20_59
location: complement(193004..194410)
location: region:193004-194410:-1
so has part: feature:193004-194410:-1:exon

XP_018734312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193004-194410:-1:exon

AWJ20_60
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PLB1
locus tag: AWJ20_60
so part of: sequence
location: <198315..>200189
location: region:198315-200189:1
so has part: feature:198315-200189:1:exon
subclass of: SO_0000010

30037650
type: Gene
SIO_000068: ncbigene

position:198315:1
position: 198315
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:200189:1
position: 200189
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198315-200189:1:exon

AWJ20_60
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PLB1
locus tag: AWJ20_60
product: Plb1p
transcript id: XM_018882549.1
SIO_010081: AWJ20_60
subclass of: SO_0000673
so part of: AWJ20_60
location: <198315..>200189
location: region:198315-200189:1
so has part: feature:198315-200189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198315-200189:1:exon

AWJ20_60
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PLB1
locus tag: AWJ20_60
inference: similar to AA sequence:KEGG_Orthology:K13333
note: Phospholipase B (lysophospholipase) involved in lipid metabolism; required for efficient acyl chain remodeling of newly synthesized phosphatidylethanolamine-derived phosphatidylcholine; required for deacylation of phosphatidylcholine and phosphatidylethanolamine but not phosphatidylinositol; PLB1 has a paralog, PLB3, that arose from the whole genome duplication; GO_component: GO:0031225 - anchored component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0042597 - periplasmic space [Evidence IDA] [PMID 8051052]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 16622836]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 8051052]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0004622 - lysophospholipase activity [Evidence IEA]; GO_function: GO:0004622 - lysophospholipase activity [Evidence IMP] [PMID 8051052]; GO_function: GO:0004620 - phospholipase activity [Evidence IEA]; GO_process: GO:0006650 - glycerophospholipid metabolic process [Evidence IMP] [PMID 8051052]; GO_process: GO:0016042 - lipid catabolic process [Evidence IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0036151 - phosphatidylcholine acyl-chain remodeling [Evidence IMP] [PMID 23501167]; GO_process: GO:0009395 - phospholipid catabolic process [Evidence IEA]
codon start: 1
product: Plb1p
translation: MHFSHILPLLLAVPALAGSPTGGYTPGQVDCPDGSLVRPADSLNPKEADFVQKRHEVARPALIDWLNRANLSDFSADQFLSNSTIPIAIAFSGGGYRAMLAGAGEFSALDNRTANSTNQHHMGGLVQAATYFAGLSGGNWLLGSIVMNNFTSIPELQGSSDVWDLSHSILNPGGINVFSTASYWDDIADDVKSKKKAGFNTSITDIWGRALSHQFFNLSNGGPALTFDDVVNYDVFQNHEMPFPIVVSDGRAPGTTVISTNSTVFELTPYELGSWDPTIYAFTQIKYLGTQVQNGKPVNGTCIAGFDNAGFTIGTSSTLFNQFILQINSTGVSGVVYDLATDILDDIGKKSDDIAIYDPNPFFKVDTVTNGITTNSVLNLVDGGEDNENIPLVPLIQPERKLDVVFAFDNSADTTYNWPNGSSLVASFQRQFGNESNNTIFPYVPDTNTFINNGYTKRPTFFGCNATNLTSLFNDSQSTQDHFVPPLIIYIANFAHSYFSNTSTFKMSYETDEVAGMIENGYNVVTQQNGTIDSDWPACVGCAIIKRELDRRGQSPTDQCQQCFDKYCWDSAVDNQAVNISGENFAPTLSVANHTSSASVATAGSVFTTSLYVICAVGALFLFA
SIO_010081: AWJ20_60
subclass of: SO_0000673
so part of: AWJ20_60
location: 198315..200189
location: region:198315-200189:1
so has part: feature:198315-200189:1:exon

XP_018734313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198315-200189:1:exon

AWJ20_61
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_61
so part of: sequence
location: complement(<200384..>201934)
location: region:200384-201934:-1
so has part: feature:200384-201934:-1:exon
subclass of: SO_0000010

30037661
type: Gene
SIO_000068: ncbigene

position:200384:-1
position: 200384
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:201934:-1
position: 201934
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200384-201934:-1:exon

AWJ20_61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_61
product: 17-beta-hydroxysteroid dehydrogenase-like protein
transcript id: XM_018882560.1
SIO_010081: AWJ20_61
subclass of: SO_0000673
so part of: AWJ20_61
location: complement(<200384..>201934)
location: region:200384-201934:-1
so has part: feature:200384-201934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200384-201934:-1:exon

AWJ20_61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_61
note: Putative glycoside hydrolase of the mitochondrial intermembrane space; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005758 - mitochondrial intermembrane space [Evidence IDA] [PMID 22984289]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]
codon start: 1
product: 17-beta-hydroxysteroid dehydrogenase-like protein
translation: MGLGSLIKDKLSKPGGSLSGSGSPTPAAPASTPGQKPSSRQIFQNRFNHGPNLGGMFVLERWISGDDLFEGTDKTSELEAVKATVKKHGLDGARAKFENHWTSWLDEGNDWNWLQSKGVTAVRVPIGYWTVDNGKFTRHTPFEEYQAVYQNAWNIFKSHVIKPAAARNIAVLIDLHALPGGANEQDHSGTSSGKAEFWSHSSSVDLATDILKFIASDMKSYDNICGIQIINEAPYANNPKHQQNYYFKALSAIRGANPDIPVVISDGWNTQQFISIIKDHEDKLSGDASSLGLIIDTHVYKCFSDEDKRKPPGQLIQDVDSAIPQTGDVDILVGEYSCVMDEGTWKQLPQGQNRDQIVSDYGRRQVSHFYQRAKAGQYFWTYKFHWGSGGEWGFREMSDKGALPDYSQIPSKSPDVYQNAFNDRLKSSLDEHVNYWKGQDANKDWQNWRYEDGFTIGWHDAQAFDEFNHSEIGRWVAWKKSRLSQHVQQKGSSDLLWVFSHGFDKGVEQFIATRNS
SIO_010081: AWJ20_61
subclass of: SO_0000673
so part of: AWJ20_61
location: complement(200384..201934)
location: region:200384-201934:-1
so has part: feature:200384-201934:-1:exon

XP_018734314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200384-201934:-1:exon

AWJ20_62
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: VPS1
locus tag: AWJ20_62
so part of: sequence
location: complement(<203639..>205672)
location: region:203639-205672:-1
so has part: feature:203639-205672:-1:exon
subclass of: SO_0000010

30037672
type: Gene
SIO_000068: ncbigene

position:203639:-1
position: 203639
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:205672:-1
position: 205672
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203639-205672:-1:exon

AWJ20_62
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: VPS1
locus tag: AWJ20_62
product: dynamin-like GTPase VPS1
transcript id: XM_018882570.1
SIO_010081: AWJ20_62
subclass of: SO_0000673
so part of: AWJ20_62
location: complement(<203639..>205672)
location: region:203639-205672:-1
so has part: feature:203639-205672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203639-205672:-1:exon

AWJ20_62
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: VPS1
locus tag: AWJ20_62
inference: similar to AA sequence:KEGG_Orthology:K17065
note: Dynamin-like GTPase required for vacuolar sorting; also involved in actin cytoskeleton organization, endocytosis, late Golgi-retention of some proteins, regulation of peroxisome biogenesis; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 20841380]; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA,IEA]; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IDA] [PMID 15550248]; GO_component: GO:0005874 - microtubule [Evidence IEA]; GO_component: GO:0005741 - mitochondrial outer membrane [Evidence IDA] [PMID 16407407]; GO_component: GO:0005777 - peroxisome [Evidence IDA] [PMID 16520372]; GO_function: GO:0005525 - GTP binding [Evidence IEA,IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IDA,ISS] [PMID 8299420]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0006184 - GTP catabolic process [Evidence IEA]; GO_process: GO:0030036 - actin cytoskeleton organization [Evidence IGI,IMP,IPI] [PMID 15265985]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0006897 - endocytosis [Evidence IGI,IMP] [PMID 20841380]; GO_process: GO:0060988 - lipid tube assembly [Evidence IDA] [PMID 20841380]; GO_process: GO:0007126 - meiotic nuclear division [Evidence IEA]; GO_process: GO:0016559 - peroxisome fission [Evidence IMP] [PMID 18445678]; GO_process: GO:0007031 - peroxisome organization [Evidence IDA,IGI,IMP] [PMID 12707309]; GO_process: GO:0045053 - protein retention in Golgi apparatus [Evidence IMP] [PMID 8649377]; GO_process: GO:0006623 - protein targeting to vacuole [Evidence IMP] [PMID 8299420]; GO_process: GO:0007034 - vacuolar transport [Evidence IMP] [PMID 8299420]
codon start: 1
product: dynamin-like GTPase VPS1
translation: MDQHLISTVNRLQDAFATLGPTTNPIDLPQITVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLTNVKAGYHKAPEGVTFKDGENADEWGEFLHNPGKKFYDFNEIRNEIVRETDAKTGKNAGISSQPINLRIYSPNVLTLTLVDLPGLTKVPVGDQPKDIERQIKEMVLKFITKPNAIILSVTAANTDLANSDGLKLAREVDPEGARTIGVLTKVDLMDQGTDVVDILAGRVIPLRYGYVPVINRGQKDIETHKSIKNALDFERKFFEEHPSYRAKAQYCGTPFLARKLNMILMHHIKTTLPDIKARIHSTLAKYQLELAQLGEDASLLGSPSNIILNIITELANEYRTILDGNSQDLSTNELSGGARISFVFHELYSNGVKAVDPFDQVKDVDIRTILYNSSGSSPSLFVATQGFEVIVKQQIKRFEDPSLRCVALVYDELVRIINGILQKPIYRRYPNLKEQLYNTIVVFLKNCVNPTNKLVSDLVSMEASYVNTAHPDFINGHSAMAQVNEKLHPTKMDPKTGKPIITQPSSSASPEPDGSGGFFGSFFASKNKKRLAAMEPPPTVLKASGTLSERETMETDVIKLLISSYFNIVKRTMIDMVPKAIILNLVKHSKEEMQRELLEKLYKSDQLNEMLKESDFTVQRRKECQKMIASLETAAEIVSSV
SIO_010081: AWJ20_62
subclass of: SO_0000673
so part of: AWJ20_62
location: complement(203639..205672)
location: region:203639-205672:-1
so has part: feature:203639-205672:-1:exon

XP_018734315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203639-205672:-1:exon

AWJ20_63
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: LAS17
locus tag: AWJ20_63
so part of: sequence
location: complement(<206199..>208523)
location: region:206199-208523:-1
so has part: feature:206199-208523:-1:exon
subclass of: SO_0000010

30037683
type: Gene
SIO_000068: ncbigene

position:206199:-1
position: 206199
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:208523:-1
position: 208523
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206199-208523:-1:exon

AWJ20_63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: LAS17
locus tag: AWJ20_63
product: Las17p
transcript id: XM_018882581.1
SIO_010081: AWJ20_63
subclass of: SO_0000673
so part of: AWJ20_63
location: complement(<206199..>208523)
location: region:206199-208523:-1
so has part: feature:206199-208523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206199-208523:-1:exon

AWJ20_63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: LAS17
locus tag: AWJ20_63
inference: similar to AA sequence:KEGG_Orthology:K05747
note: Actin assembly factor; C-terminal WCA domain activates Arp2/3 complex-mediated nucleation of branched actin filaments and a polyproline domain which can nucleate actin filaments independent of Arp2/3; mutants are defective in actin cytoskeleton dependent processes such as: endocytosis, bud site selection and cytokinesis; localizes with the Arp2/3 complex to actin cortical patches; homolog of the Wiskott-Aldrich Syndrome protein (WASP), implicated in severe immunodeficiency; GO_component: GO:0030479 - actin cortical patch [Evidence IEA]; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 10512884]; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 9024694]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_function: GO:0003779 - actin binding [Evidence IEA]; GO_function: GO:0003779 - actin binding [Evidence IDA] [PMID 10512884]; GO_function: GO:0003779 - actin binding [Evidence IDA,IPI] [PMID 23290554]; GO_process: GO:0051666 - actin cortical patch localization [Evidence IGI,IMP] [PMID 18177206]; GO_process: GO:0007015 - actin filament organization [Evidence IEA]; GO_process: GO:0007015 - actin filament organization [Evidence IDA] [PMID 9214384]; GO_process: GO:0030041 - actin filament polymerization [Evidence IDA] [PMID 22973053]; GO_process: GO:0045010 - actin nucleation [Evidence IDA] [PMID 23290554]; GO_process: GO:0006897 - endocytosis [Evidence IEA]; GO_process: GO:2000601 - positive regulation of Arp2/3 complex-mediated actin nucleation [Evidence IEA]; GO_process: GO:2000601 - positive regulation of Arp2/3 complex-mediated actin nucleation [Evidence IDA] [PMID 10322115]; GO_process: GO:0032233 - positive regulation of actin filament bundle assembly [Evidence IDA] [PMID 19158382]
codon start: 1
product: Las17p
translation: MAILKDADKEKVKRAIPKASNKIVDATVARLYIAYPDANSWTYTGLSGAITLVNDLVGNTFFLKLVDIATHRGVIWDQELYINFKYNQDRSFFHTFELDECLAGLLFEEESEASHFFKRVQNKEKYASKATLNNKNAIALKKTANKIQANTPAPQGPRGDPTGLRRRLYLEGSSGPVYYDSEPPPEWRPLYAELASQGITEEMIAENREFIKEYIRQQGGPLVGLEPPIPRRSAPSSAATESTSNGSSGISNGRNRSDSSVTVASVGSGTSESSSTKATRKAKAPPPPPPPGPPNVPKKATPPSTSAPSASAGPPSVAPISTSVPSGSSASSPSPEPGTPSSATATPTSYKVPPPMPFIGQRVASNPSRPSAPATAPGGVPPPPPPPGSARPVPSLPPRGSVPPPPANANPYGTPPYQQQPPPASPYGQQPTSPYGQPPGTAGRPVPPPPSLPPRGVANNGQAPQFGMPPPPAPGAAGAGQYIPPAPPQRGAVPPPPPPQRGGVPPPPPPSRVQQPPPAAGVPPPPPPPPPGQPELQPPTFNPYQTPPPPQSQPQAVSPPVKIDVKPISSFPPPPRPHNAGTPPVASVAPPASTSQPPAPPPPPPPAAAPPSFNNAAVPPPPPPPPPPTAGVPPPPPPPPAPPGPPPAFGSAAPPPPPPPPPGGAPGAPPPPPPLQADAGGPPAPPLPTGDGGRDALLASIRGAGIGSLRKVDKSQLDRPSVILQEARGETPTPAPSAAPGGNASLADALASALNARKGKVALSDDEDDDEDWD
SIO_010081: AWJ20_63
subclass of: SO_0000673
so part of: AWJ20_63
location: complement(206199..208523)
location: region:206199-208523:-1
so has part: feature:206199-208523:-1:exon

XP_018734316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206199-208523:-1:exon

AWJ20_64
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_64
so part of: sequence
location: complement(<210307..>211734)
location: region:210307-211734:-1
so has part: feature:210307-211734:-1:exon
subclass of: SO_0000010

30037694
type: Gene
SIO_000068: ncbigene

position:210307:-1
position: 210307
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:211734:-1
position: 211734
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210307-211734:-1:exon

AWJ20_64
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_64
product: hypothetical protein
transcript id: XM_018882591.1
SIO_010081: AWJ20_64
subclass of: SO_0000673
so part of: AWJ20_64
location: complement(<210307..>211734)
location: region:210307-211734:-1
so has part: feature:210307-211734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210307-211734:-1:exon

AWJ20_64
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_64
codon start: 1
product: hypothetical protein
translation: MITPFSFFRRSKRETLSAKPVASLGPCICTRNISSQTGSNSVDLTSPLEPTDSRESSSSLSSSCASSNLDVSSVSQVSYPNEPPCPKGGSEDPIFLPNEVLLQRFSNRKSGLKLSKWKMEQQRLKCRRCSTATTASTNPDNTSSTSGRSSYTAGGVTMSAFAASASASASASATATSTTSRCNTSSTSASVSASSTGNTTLECTTLTGSTGSITVSTQCPASYKYSSSGSTTAAITENCHDELSDQTHPGVIYVTSERLIFVPKSELIDGYTLDITSLSCMKAIESTKRVWFFVCYKDNNSIATIPFSSQARCQAFLRLIKNIRFEHMVRQCLPPRYTHYSIPEETNSTMDTDSDSPADSNYTLSSSTPPNDNGSSEFQPDEWWYGDNQLPSYNDSEEALHKYLTNLGLLTETEPLDRTERISRLIALATVPQSVALDDSTSTTTSSSSSNRSNVPRTTQTAAAHEAYHSPYVWF
SIO_010081: AWJ20_64
subclass of: SO_0000673
so part of: AWJ20_64
location: complement(210307..211734)
location: region:210307-211734:-1
so has part: feature:210307-211734:-1:exon

XP_018734317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210307-211734:-1:exon

AWJ20_65
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_65
so part of: sequence
location: complement(<215475..>216728)
location: region:215475-216728:-1
so has part: feature:215475-216728:-1:exon
subclass of: SO_0000010

30037705
type: Gene
SIO_000068: ncbigene

position:215475:-1
position: 215475
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:216728:-1
position: 216728
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215475-216728:-1:exon

AWJ20_65
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_65
product: hypothetical protein
transcript id: XM_018882601.1
SIO_010081: AWJ20_65
subclass of: SO_0000673
so part of: AWJ20_65
location: complement(<215475..>216728)
location: region:215475-216728:-1
so has part: feature:215475-216728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215475-216728:-1:exon

AWJ20_65
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_65
codon start: 1
product: hypothetical protein
translation: MIRRQSIPLSLLTNNPVSSILNNGMSSENRDGTAGTPAAVGGSGASRINSILNPKPEYQTSALRYRTSPSQAISGVHATARVQHTPSGGLHGSEFSSPTSSSDLTDSAESEEDSGSFNRGLNRASTAGTVSSLTTHGTNGTNTANRTNMMNRMNSMNNSTLSSRSSSSSNSSGISISSITNNNNSTSTSLSTAPAPRPTRAKREEQPGSGAEPQPPEAHTPHPDPLSTRAPSASPPAGKPAGSHRRKSSVFNGNSETGLANYIKVPLKKRTRDQVDDGAGNDDDTESLEYQYQCLDCLDRFSSTSELRQHKKNLHHIQTYKCRKCGELFRSIADRQTHKNNKHFDTITCTIEGDNFREFKQGSTVSSNRNGAGYFSCPVDYCTFLTRIPGYWYDHVHHVEHHGENPQKRKKRASMAP
SIO_010081: AWJ20_65
subclass of: SO_0000673
so part of: AWJ20_65
location: complement(215475..216728)
location: region:215475-216728:-1
so has part: feature:215475-216728:-1:exon

XP_018734318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215475-216728:-1:exon

AWJ20_66
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CAF40
locus tag: AWJ20_66
so part of: sequence
location: complement(<217960..>219288)
location: region:217960-219288:-1
so has part: feature:217960-219288:-1:exon
subclass of: SO_0000010

30037716
type: Gene
SIO_000068: ncbigene

position:217960:-1
position: 217960
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:219288:-1
position: 219288
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217960-219288:-1:exon

AWJ20_66
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CAF40
locus tag: AWJ20_66
product: CCR4-NOT core subunit CAF40
transcript id: XM_018882612.1
SIO_010081: AWJ20_66
subclass of: SO_0000673
so part of: AWJ20_66
location: complement(<217960..>219288)
location: region:217960-219288:-1
so has part: feature:217960-219288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217960-219288:-1:exon

AWJ20_66
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CAF40
locus tag: AWJ20_66
inference: similar to AA sequence:KEGG_Orthology:K12606
note: Component of the CCR4-NOT transcriptional complex; evolutionarily conserved; involved in controlling mRNA initiation, elongation, and degradation; binds Cdc39p; GO_component: GO:0030015 - CCR4-NOT core complex [Evidence IPI] [PMID 11733989]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter [Evidence IDA,IPI] [PMID 21406554]; GO_process: GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IPI] [PMID 11733989]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: CCR4-NOT core subunit CAF40
translation: MYANVARQQGGAEQGPPGPNYAQLPQHQHPQQQPQQPQQQQQQQQQQQQQLHPQQAQAQAQAQGQAPGPGQPQNHPQSQSQHQQQQQQQQQPQQNPGQPHLMSQGPSQGNLGGGNIGANIGGNGTGLPAGISASALNIINAANSSAGQAGTGLPLPIPTDQGNEERHTSDDDRVFAWILELMHGPNREQALLELGKKREQYDELALILWHSFGVMTCLLQEIISVYPLLSPPQLSSPASNRVCNALALLQCVASHDQTRNLFLNAHIPLFIYPFLNTSSKSRAFEYLRLTSLGVVGALVKNDSPEVISFLLSTEIIPLCLSIMESGTELSKTVAIFIVQKILMDDMGLNYVCQTYERFFAVSVVLSNMVAQLVALPPASSRLLKHVVRCYLRLSDNGRAREALRQILPEPLRDATFSYTLRDDAGTKRCLAQLLVNLSDNYE
SIO_010081: AWJ20_66
subclass of: SO_0000673
so part of: AWJ20_66
location: complement(217960..219288)
location: region:217960-219288:-1
so has part: feature:217960-219288:-1:exon

XP_018734319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217960-219288:-1:exon

AWJ20_67
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HRR25
locus tag: AWJ20_67
so part of: sequence
location: <227115..>228152
location: region:227115-228152:1
so has part: feature:227115-228152:1:exon
subclass of: SO_0000010

30037727
type: Gene
SIO_000068: ncbigene

position:227115:1
position: 227115
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:228152:1
position: 228152
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227115-228152:1:exon

AWJ20_67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HRR25
locus tag: AWJ20_67
product: serine/threonine protein kinase HRR25
transcript id: XM_018882623.1
SIO_010081: AWJ20_67
subclass of: SO_0000673
so part of: AWJ20_67
location: <227115..>228152
location: region:227115-228152:1
so has part: feature:227115-228152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227115-228152:1:exon

AWJ20_67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HRR25
locus tag: AWJ20_67
inference: similar to AA sequence:KEGG_Orthology:K14758
codon start: 1
product: serine/threonine protein kinase HRR25
translation: MGIGRRGNQVNVIDFGLAKKFRDPRTYMHIPYRENKNLTGTARYASINTHLGVEQSRRDDLESLAYVLIYFCRGSLPWQGLKAQTKKEKYDRIMEKKMTTSTEALTRGLPCEFTIILNYARSLTFDDKPDYLYLHRVVRELFNRQGYQYDYVFDWTIYKHHQQKQAENNGANGSNAKNNNGGTGGAGAGATGGASVTNNGNAAALPSSSQPKLLGGPSQSGQAVNQSSSAQAQAQAQAQAAQAQVQAQAQAQMAQAQAQLQAQAQLQRQQQVLAGNGQGHVSHPSSSNLHNEATGGYYRGYDDSMARYNKSGSPQEQGGQAHPQAKRQDSDPLIDALQLGNQAWL
SIO_010081: AWJ20_67
subclass of: SO_0000673
so part of: AWJ20_67
location: 227115..228152
location: region:227115-228152:1
so has part: feature:227115-228152:1:exon

XP_018734320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227115-228152:1:exon

AWJ20_68
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NPY1
locus tag: AWJ20_68
so part of: sequence
location: <228875..>230263
location: region:228875-230263:1
so has part: feature:228875-230263:1:exon
subclass of: SO_0000010

30037738
type: Gene
SIO_000068: ncbigene

position:228875:1
position: 228875
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:230263:1
position: 230263
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228875-230263:1:exon

AWJ20_68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NPY1
locus tag: AWJ20_68
product: NAD(+) diphosphatase
transcript id: XM_018882634.1
SIO_010081: AWJ20_68
subclass of: SO_0000673
so part of: AWJ20_68
location: <228875..>230263
location: region:228875-230263:1
so has part: feature:228875-230263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228875-230263:1:exon

AWJ20_68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NPY1
locus tag: AWJ20_68
inference: similar to AA sequence:KEGG_Orthology:K03426
note: NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; nudix hydrolase family member; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005777 - peroxisome [Evidence IDA] [PMID 11361135]; GO_function: GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]; GO_function: GO:0000210 - NAD+ diphosphatase activity [Evidence IDA] [PMID 11361135]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA,IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA,IEA]; GO_process: GO:0006734 - NADH metabolic process [Evidence IDA] [PMID 11361135]
codon start: 1
product: NAD(+) diphosphatase
translation: MLTAARLRRVYSMVASSSVDIAATGAGAGAGGIPLGPVSRVYGPETKNFYSGNPLNRISFARDDYEFLDRALKHKGTRFLTLRDLDVSTRKLRPEQIVSAGSGHQIKSELAYLGYEDVKNIVGDPFSKPEKDQIKAWSSKRDAIGIGRVATVFLGIDESAPEATHVNYKHFRGQAYFAVDVTPERVTDSGLKSSVEQLLESKYTSSVSTTGAERSEEIDYEKAEHRNLRFGPRLSTESYALYAQARMYIDWNNRNKFCGGCGSRNMSVNGGTKLVCPSHDDGVELPFCETRGVVTNLSFPRTDTSIIVAVVNRSNDRILLGCGRRFPKGFYSCLAGFLEPAESIEDCVRREVYEESGVTVGRVHVHSTQPWPYPANIMVGCIAEVADDTPEASKIHLGHDPELLDAQWFTFDEVRKAVHRSKQPGYRFGATNDYPLNVPGPEAIANILIDAVVSTSSSLSKI
SIO_010081: AWJ20_68
subclass of: SO_0000673
so part of: AWJ20_68
location: 228875..230263
location: region:228875-230263:1
so has part: feature:228875-230263:1:exon

XP_018734321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228875-230263:1:exon

AWJ20_69
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MSS4
locus tag: AWJ20_69
so part of: sequence
location: <233185..>235227
location: region:233185-235227:1
so has part: feature:233185-235227:1:exon
subclass of: SO_0000010

30037749
type: Gene
SIO_000068: ncbigene

position:233185:1
position: 233185
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:235227:1
position: 235227
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233185-235227:1:exon

AWJ20_69
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MSS4
locus tag: AWJ20_69
product: 1-phosphatidylinositol-4-phosphate 5-kinase
transcript id: XM_018882645.1
SIO_010081: AWJ20_69
subclass of: SO_0000673
so part of: AWJ20_69
location: <233185..>235227
location: region:233185-235227:1
so has part: feature:233185-235227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233185-235227:1:exon

AWJ20_69
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MSS4
locus tag: AWJ20_69
inference: similar to AA sequence:KEGG_Orthology:K00889
note: Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 9624177]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 9624177]; GO_function: GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity [Evidence IEA]; GO_function: GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity [Evidence IDA] [PMID 9624177]; GO_function: GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity [Evidence IDA] [PMID 9624178]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016307 - phosphatidylinositol phosphate kinase activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0031321 - ascospore-type prospore assembly [Evidence IGI] [PMID 19502581]; GO_process: GO:0046488 - phosphatidylinositol metabolic process [Evidence IEA]; GO_process: GO:0046854 - phosphatidylinositol phosphorylation [Evidence IDA] [PMID 9624177]; GO_process: GO:0046854 - phosphatidylinositol phosphorylation [Evidence IDA] [PMID 9624178]; GO_process: GO:0016310 - phosphorylation [Evidence IEA]
codon start: 1
product: 1-phosphatidylinositol-4-phosphate 5-kinase
translation: MKVSIRSGGCYCVFTPANKLGIKQVVAAPLTQGSVHKVTYGPNYCPSSEGKYYEVSAALLSQRPANTLGIKQVVTAPLTQGPVHKVPRRPVLSDIQRLNSVAKVDVCEQQDRRRSARPFDFPSPLDSSVSVESNETLYEPTSWKHTKAIDIVGEHTTCEELNNTCSAPIDQDDDKCSKWSFESGNEAAFICHQIQNAWSEVNTEAAWTSLAASWALPDCPIEIDEASPSIDSHCDVTLVESHLKTSSSTLAGPEDSNHSLSVAETTSAKVDDQTPCAIADAPTTEGSCSIDSLDADVVNLSKGLPQSIVSGSLQADPESELLKTAPLAPSSEPIAQTTSDDLVIPVEGFDKSKTSLFLTRVKAKMASFTGIGAPISRSTLMFNGVQTATYANPPPCSQESLTKANKTYRLDGGAFIKAYSPIVYHYIRTLCGIDYQEFLNSFVLHSDLTKTKSPGKSGSDFLFTPDGKYIIKTIKRKEHKVISNVDFLGDYYNHIKAHPSTQLPFYLGNYTLLADGKKTHFVVMKNLLQKETELIYDLKGSSHGRHAGPRKDNRGRVVFKDLDWIDKNEAISMTQEDRDKLMVQVSKDVDLLMRHNIMDYSLLVGLQTDTGTCEQRPVIGMIDTLCPFGWRKRAENLSKSLFLGASAIDVVHPEKYGTRFLNFVQSAVIPGPGRSVSTHC
SIO_010081: AWJ20_69
subclass of: SO_0000673
so part of: AWJ20_69
location: 233185..235227
location: region:233185-235227:1
so has part: feature:233185-235227:1:exon

XP_018734322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233185-235227:1:exon

AWJ20_70
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GLO2
locus tag: AWJ20_70
so part of: sequence
location: complement(<237728..>238030)
location: region:237728-238030:-1
so has part: feature:237728-238030:-1:exon
subclass of: SO_0000010

30037761
type: Gene
SIO_000068: ncbigene

position:237728:-1
position: 237728
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:238030:-1
position: 238030
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237728-238030:-1:exon

AWJ20_70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GLO2
locus tag: AWJ20_70
product: hydroxyacylglutathione hydrolase GLO2
transcript id: XM_018882655.1
SIO_010081: AWJ20_70
subclass of: SO_0000673
so part of: AWJ20_70
location: complement(<237728..>238030)
location: region:237728-238030:-1
so has part: feature:237728-238030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237728-238030:-1:exon

AWJ20_70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GLO2
locus tag: AWJ20_70
inference: similar to AA sequence:KEGG_Orthology:K01069
note: Cytoplasmic glyoxalase II; catalyzes the hydrolysis of S-D-lactoylglutathione into glutathione and D-lactate; GLO2 has a paralog, GLO4, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 9261170]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA,IEA]; GO_function: GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA,IEA]; GO_function: GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IDA,IGI,IMP] [PMID 9261170]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006750 - glutathione biosynthetic process [Evidence IEA]; GO_process: GO:0019243 - methylglyoxal catabolic process to D-lactate [Evidence IDA,IGI,IMP] [PMID 9261170]
codon start: 1
product: hydroxyacylglutathione hydrolase GLO2
translation: MVTALVSVLGSLPDDTKVYPGHEYTASNLKFVKTVLNNEAVSKLDKFTAQNEQTTGAFTIGDEKQYNPFMMVDSPVIKKAVGLDDRVDVMHKLRELKNKM
SIO_010081: AWJ20_70
subclass of: SO_0000673
so part of: AWJ20_70
location: complement(237728..238030)
location: region:237728-238030:-1
so has part: feature:237728-238030:-1:exon

XP_018734323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237728-238030:-1:exon

AWJ20_71
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_71
so part of: sequence
location: <240865..>241452
location: region:240865-241452:1
so has part: feature:240865-241452:1:exon
subclass of: SO_0000010

30037772
type: Gene
SIO_000068: ncbigene

position:240865:1
position: 240865
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:241452:1
position: 241452
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240865-241452:1:exon

AWJ20_71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_71
product: glycerophosphoryl diester phosphodiesterase (predicted)
transcript id: XM_018882666.1
SIO_010081: AWJ20_71
subclass of: SO_0000673
so part of: AWJ20_71
location: <240865..>241452
location: region:240865-241452:1
so has part: feature:240865-241452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240865-241452:1:exon

AWJ20_71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_71
codon start: 1
product: glycerophosphoryl diester phosphodiesterase (predicted)
translation: MLDIKRTNEPWVIPKIVEDLKKVNSDLDFWGRRMVLGIWRWDVLESANSSCPTLPVLHIGFSRSLARKFLAQSQVVGISLNVVSLNVPGGSSLIHEAKQLGKLTYAWTVNQKPAMKWAASMDLDGIITDHPDVYAKFIGDVTEKEIETIYAVKEPSAFYTFSEKMSYRLKFAVMWMWVFYLQVSDFFFPSAKGPF
SIO_010081: AWJ20_71
subclass of: SO_0000673
so part of: AWJ20_71
location: 240865..241452
location: region:240865-241452:1
so has part: feature:240865-241452:1:exon

XP_018734324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240865-241452:1:exon

AWJ20_72
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SEC63
locus tag: AWJ20_72
so part of: sequence
location: <242359..>244443
location: region:242359-244443:1
so has part: feature:242359-244443:1:exon
subclass of: SO_0000010

30037783
type: Gene
SIO_000068: ncbigene

position:242359:1
position: 242359
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:244443:1
position: 244443
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242359-244443:1:exon

AWJ20_72
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SEC63
locus tag: AWJ20_72
product: protein-transporting protein SEC63
transcript id: XM_018882677.1
SIO_010081: AWJ20_72
subclass of: SO_0000673
so part of: AWJ20_72
location: <242359..>244443
location: region:242359-244443:1
so has part: feature:242359-244443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242359-244443:1:exon

AWJ20_72
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SEC63
locus tag: AWJ20_72
inference: similar to AA sequence:KEGG_Orthology:K09540
codon start: 1
product: protein-transporting protein SEC63
translation: MSDSRYSYDDNGEVWPYFAATLLGVVLVPMTGLAVVGSGSSSGDQQQQQKVGGTSGKKGDSKTKEKSEFKPRNYKQLSKFRSSRKSLFTAYNGLIAAGWLVMAGLVYIIIQQRILSASDTSKVTFDPYEILGVSYSASEKEIKSVYRKLSVKLHPDKIKASDLANQTREFFEARYVDITKAYKALTDETVRDNFLKYGHPDGPQQTSHGIALPKFLVEGKGSPIVIALYSSVVGILLPLLVGSWWAGTAIYTKTGIRQTTAGKFFEICAKDQPHFITYDRILEILAQSEELELIGKANKGKLGALNSKQIKQVLEDYLNRRETNEKDIDVDTQLEIVSVTPLLLDGLLDISSAFKSATLCQRVIEVKRCIVQAVPFKDQSHGEFLQIPGVQLDTKAKDSSSASSSSWEKSLSSTELEAARQIPKLHFLNAYFKVPGESVVPPNAQAHLIIKFAVTPLGGSSKPPKPEEFDPVLLEDPVDDDETSKVLREPLHTNDLPPVIPYASAPYFPGVYRPNWYGFIVNEKDNKIIDGPAELTRLSYQNLSLSDKDISSKSADNKLAVATFKIQLTTATPPFPGTFSFKLMLLSSGYFGTDIIESVKMTVENPPAVAETTAQDDEDDISEPEEDSVAGALSQMRGGSVKKRAPTSSSTTTDKNDDDEDESSDDEEDLTDIDTDTEDEEDLDDEDSDAKKNK
SIO_010081: AWJ20_72
subclass of: SO_0000673
so part of: AWJ20_72
location: 242359..244443
location: region:242359-244443:1
so has part: feature:242359-244443:1:exon

XP_018734325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242359-244443:1:exon

AWJ20_73
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CUE5
locus tag: AWJ20_73
so part of: sequence
location: complement(<245468..>246964)
location: region:245468-246964:-1
so has part: feature:245468-246964:-1:exon
subclass of: SO_0000010

30037794
type: Gene
SIO_000068: ncbigene

position:245468:-1
position: 245468
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:246964:-1
position: 246964
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245468-246964:-1:exon

AWJ20_73
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CUE5
locus tag: AWJ20_73
product: Cue5p
transcript id: XM_018882688.1
SIO_010081: AWJ20_73
subclass of: SO_0000673
so part of: AWJ20_73
location: complement(<245468..>246964)
location: region:245468-246964:-1
so has part: feature:245468-246964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245468-246964:-1:exon

AWJ20_73
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CUE5
locus tag: AWJ20_73
note: Ubiquitin-binding protein; contains a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; CUE5 has a paralog, DON1, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0043130 - ubiquitin binding [Evidence IDA] [PMID 12628920]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Cue5p
translation: MAPKSAKGDKKSQSAAAETDKTAAEETVKSKSAELTAESDTKSKDESTESKDTDADVAGSGGSDSNANAKSDADISSATAATTTTATSTTGATEGDGEGEDGKPPAKPARPMSPHAEAQATLEEAFPGVEKSVIRAVLIASQYKLDPAFNALLAMNDPDFKPEDSFPVETDEPSAARPRGPDPKQLAEDEALARKLAAEYNRSAGSRQPPPPPLRRTSTANSGDYNSSSRVRQSTSSYSGRYDEPRPVENERSFFDDDLPEIKATFEKGFNETKTKVSNWMNNFRKKIDGEGGQPGIFGALGGTGNSPRSSYDNQYSYRRTSNDEYDNRQPPPRPARYNNGNRRVYDRDPDEINDDFQGVTLQDDVDEAAPPKPPRPSGESGRTGSANSTTATTTVKKTTTSTSTGTKGASEDSSKPPTTRPRAVSALGDDDPEEITKSFAPPPLSAAKLSSGTSGATAKWEPLKAVAPEPESDKDAFFIGDSDEDDDDDEPLATLKK
SIO_010081: AWJ20_73
subclass of: SO_0000673
so part of: AWJ20_73
location: complement(245468..246964)
location: region:245468-246964:-1
so has part: feature:245468-246964:-1:exon

XP_018734326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245468-246964:-1:exon

AWJ20_74
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MEX67
locus tag: AWJ20_74
so part of: sequence
location: <248059..>249867
location: region:248059-249867:1
so has part: feature:248059-249867:1:exon
subclass of: SO_0000010

30037805
type: Gene
SIO_000068: ncbigene

position:248059:1
position: 248059
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:249867:1
position: 249867
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248059-249867:1:exon

AWJ20_74
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MEX67
locus tag: AWJ20_74
product: Mex67p
transcript id: XM_018882698.1
SIO_010081: AWJ20_74
subclass of: SO_0000673
so part of: AWJ20_74
location: <248059..>249867
location: region:248059-249867:1
so has part: feature:248059-249867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248059-249867:1:exon

AWJ20_74
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MEX67
locus tag: AWJ20_74
inference: similar to AA sequence:KEGG_Orthology:K14284
note: Poly(A)RNA binding protein involved in nuclear mRNA export; component of the nuclear pore; ortholog of human TAP; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 10684247]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0042272 - nuclear RNA export factor complex [Evidence IPI] [PMID 9774696]; GO_component: GO:0005643 - nuclear pore [Evidence IDA] [PMID 10684247]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 23212245]; GO_function: GO:0003723 - RNA binding [Evidence IDA] [PMID 12524544]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 23222640]; GO_function: GO:0005515 - protein binding [Evidence IPI] [PMID 12411502]; GO_process: GO:0006406 - mRNA export from nucleus [Evidence IMP] [PMID 10722667]; GO_process: GO:0051028 - mRNA transport [Evidence IEA,IEA]; GO_process: GO:0000055 - ribosomal large subunit export from nucleus [Evidence IGI,IMP] [PMID 17434126]; GO_process: GO:0000056 - ribosomal small subunit export from nucleus [Evidence IMP] [PMID 22956913]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Mex67p
translation: MSWRGGRGRGNSSNNNYNNGGDFGSRLGGTQSSGFGSGGSSHNNNATVEIRGWEGGTRDDLVAFILRKCSIKLQNVIVNGGVISAGVKQEEAGPLVKWSGVRFAGAPLRITIVESNKPSSASNPPTYGTVEILRNFLQSRYNAQISMLDLQNLKNDVYLQQNGLFASASTASKMFPALMKIAGELASGQQRMVVESVNLAANELQEVTGVTTLAQAFPDLKNLSLANNNITRLKGLEPWRHKFRLLRELILSGNPVTEQPGYKEEMMKMFPRLIMLDGQMIRDESTLDQLKLPLPVKQMFFENPDVQGIATSFLTNFFNAFDHDRAQLAQLYDETSTFSISVNSSSPRVMPGGGTTAPSQAGWSAYIPLSRNLQKVTTESARINRLAIGPQAILNAFRRIPPTKHPLMESPDKFAVETWHTNGVRAADDTGIMISIHGEFSEQQTNTVRSFDRTFILIQGPAGNMIVASDIMTVRSWGGSESWKESVLPPPTVPTTVPGVNTPSAGAGGVNGIPPPAPTINPMNPSAPPPIMATGTPPTVNTPPELADLPPPQLAIVQQLMQETRLTPQYSRMLAEQANFDLNQAAVLFQQSRQQLPPSAFL
SIO_010081: AWJ20_74
subclass of: SO_0000673
so part of: AWJ20_74
location: 248059..249867
location: region:248059-249867:1
so has part: feature:248059-249867:1:exon

XP_018734327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248059-249867:1:exon

AWJ20_75
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ERG5
locus tag: AWJ20_75
so part of: sequence
location: complement(<251796..>253397)
location: region:251796-253397:-1
so has part: feature:251796-253397:-1:exon
subclass of: SO_0000010

30037816
type: Gene
SIO_000068: ncbigene

position:251796:-1
position: 251796
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:253397:-1
position: 253397
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251796-253397:-1:exon

AWJ20_75
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ERG5
locus tag: AWJ20_75
product: C-22 sterol desaturase
transcript id: XM_018882709.1
SIO_010081: AWJ20_75
subclass of: SO_0000673
so part of: AWJ20_75
location: complement(<251796..>253397)
location: region:251796-253397:-1
so has part: feature:251796-253397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251796-253397:-1:exon

AWJ20_75
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ERG5
locus tag: AWJ20_75
inference: similar to AA sequence:KEGG_Orthology:K09831
note: C-22 sterol desaturase; a cytochrome P450 enzyme that catalyzes the formation of the C-22(23) double bond in the sterol side chain in ergosterol biosynthesis; may be a target of azole antifungal drugs; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 14562095]; GO_function: GO:0000249 - C-22 sterol desaturase activity [Evidence IDA] [PMID 8543054]; GO_function: GO:0020037 - heme binding [Evidence IEA]; GO_function: GO:0005506 - iron ion binding [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0004497 - monooxygenase activity [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]; GO_process: GO:0006696 - ergosterol biosynthetic process [Evidence IDA] [PMID 8543054]; GO_process: GO:0006696 - ergosterol biosynthetic process [Evidence IMP] [PMID 8635732]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0006694 - steroid biosynthetic process [Evidence IEA]; GO_process: GO:0008202 - steroid metabolic process [Evidence IEA]; GO_process: GO:0016126 - sterol biosynthetic process [Evidence IEA,IEA]
codon start: 1
product: C-22 sterol desaturase
translation: MSVENASVFTDQLPLDADNLSQSLTSSLIVQAIVWSRSNVWSLVLTVVVGLLIYDQISYIIKKGSIAGPKFKVWPVIGPFLESMNPKFEEYKAKWDSGPLSCVSVFHKFVVIASNRDLARKIFNSPSYVKPCVVDVAIKLLRPTNWVFLDGKAHVDYRRSLNGLFTRQALGVYLPHQETIYDKYFERFVALSKSNKGPLPFMPEFRELNCAVSLRTFCGEYITEEQVKIISDNYYKITAALELVNFPIILPFTKTWYGKKITDMTMDIFAKCAQMAKDHIAQGGDVTCVMDAWVKLMHDSKNSTSDDNDEVKKFLVRDFTNKEISETIFTFLFASQDASSSATTWLFQIIADRPDVMAKIREEQLRVRDGDVHRRLDVDLVESMEYTRMVVKEALRYRPPVTMVPYVAKKSYPISADYTIPKGAMVIPTLYPALHDPEVYENPDEFIPERWVANSPATNAAKNWLVFGTGPHVCLGQTYVMLNLTAMMGKAALFYDWKHTVTEKSENIRVFATIFPDDDCILEFSKRADPTKL
SIO_010081: AWJ20_75
subclass of: SO_0000673
so part of: AWJ20_75
location: complement(251796..253397)
location: region:251796-253397:-1
so has part: feature:251796-253397:-1:exon

XP_018734328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251796-253397:-1:exon

AWJ20_76
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: UGA4
locus tag: AWJ20_76
so part of: sequence
location: complement(<255830..>256993)
location: region:255830-256993:-1
so has part: feature:255830-256993:-1:exon
subclass of: SO_0000010

30037827
type: Gene
SIO_000068: ncbigene

position:255830:-1
position: 255830
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:256993:-1
position: 256993
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255830-256993:-1:exon

AWJ20_76
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: UGA4
locus tag: AWJ20_76
product: Uga4p
transcript id: XM_018882720.1
SIO_010081: AWJ20_76
subclass of: SO_0000673
so part of: AWJ20_76
location: complement(<255830..>256993)
location: region:255830-256993:-1
so has part: feature:255830-256993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255830-256993:-1:exon

AWJ20_76
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: UGA4
locus tag: AWJ20_76
note: GABA (gamma-aminobutyrate) permease; serves as a GABA transport protein involved in the utilization of GABA as a nitrogen source; catalyzes the transport of putrescine and delta-aminolevulinic acid (ALA); localized to the vacuolar membrane; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IDA] [PMID 14985124]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005774 - vacuolar membrane [Evidence IEA]; GO_component: GO:0005773 - vacuole [Evidence IEA]; GO_function: GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]; GO_function: GO:0015495 - gamma-aminobutyric acid:proton symporter activity [Evidence IGI] [PMID 8455553]; GO_function: GO:0015489 - putrescine transmembrane transporter activity [Evidence IGI] [PMID 14985124]; GO_process: GO:0003333 - amino acid transmembrane transport [Evidence IEA]; GO_process: GO:0006865 - amino acid transport [Evidence IEA]; GO_process: GO:0015812 - gamma-aminobutyric acid transport [Evidence IGI] [PMID 14985124]; GO_process: GO:0015812 - gamma-aminobutyric acid transport [Evidence IEP,IGI] [PMID 8455553]; GO_process: GO:0015847 - putrescine transport [Evidence IGI] [PMID 14985124]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IGI] [PMID 8455553]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Uga4p
translation: MFSEAKVFGLDFNVDVSNVRFRAVQWIVSEAILGLCLLINYLHPKYYKYAFRICMGIVILDFLLNVIWLPIGVSQTYGFQSADFVFTNFENETGGASNTWAWMLCFFATAGVQVGFDASAHVAEETKNASVTAAKGLIYSAIACTLMAAPIILIFLFCTPDLDVLFSFDAPQPFVQIYALALGKRAHCVMTALSVLSTLASSIVSIVAASRLVYAIARDGVLPFSGWISKVSPKTNQPTNAITFIGIVSAILLCSILPSALAFQSLVSISGVPTVSAWGLISFGRFFLSKQTAFKPKLSLGVFSKPFQLISFLWNTYLAGILFSPQEFPVTAQNLNYAPIIMGIVTMFALCAYFIIPEERWLKLKSNVLGIEENSDTDSSQHSSSQS
SIO_010081: AWJ20_76
subclass of: SO_0000673
so part of: AWJ20_76
location: complement(255830..256993)
location: region:255830-256993:-1
so has part: feature:255830-256993:-1:exon

XP_018734329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255830-256993:-1:exon

AWJ20_77
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_77
so part of: sequence
location: <259206..>260735
location: region:259206-260735:1
so has part: feature:259206-260735:1:exon
subclass of: SO_0000010

30037838
type: Gene
SIO_000068: ncbigene

position:259206:1
position: 259206
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:260735:1
position: 260735
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259206-260735:1:exon

AWJ20_77
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_77
product: hypothetical protein
transcript id: XM_018882731.1
SIO_010081: AWJ20_77
subclass of: SO_0000673
so part of: AWJ20_77
location: <259206..>260735
location: region:259206-260735:1
so has part: feature:259206-260735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259206-260735:1:exon

AWJ20_77
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_77
codon start: 1
product: hypothetical protein
translation: MVDDGMKQDEVLEVIADADSTFSDDLFGIVIKDDVLYKKQVLVQKALDDIGMTPFHWKLFFLNSFGYASDSLLVVCQSIAQPQVNLEFGRENDRIPGVSTASAVGLLVGAIFWGVGADIIGRRLAFNSSLFLAAVFVIIAGAMPSYISFTAMVALYSAATGGNYCLDASNLLEFLPRKKAFLTTILAVAWGFGYTITGLLAWAFMSNYSCLSADNCPRSSNQGWRYLHYTSGGLVLIAAILRVTIIHMPHTPKFLITQNRDEEAVKFLTDIARKYNRTTTITVEQLSSYGAIQDVKEGNKVRRFTKHVRGIFVSRKSTYSYILLLMLWLLIGLGDPLYSYFRPYYLKTRGYQDNTTASNYIVWRNYAISNICGLVGPLLAWPLLDFKYLRRKGTLAVSALATMLFLFGYTQVRTPTQNTALSFCINAVETMFFAALYGVTPELLPTGSRATGYGIAVALNRVCNIFASIIAGYANVETTAPLFISASMFGALAVVSLLLPFEPAGKYIA
SIO_010081: AWJ20_77
subclass of: SO_0000673
so part of: AWJ20_77
location: 259206..260735
location: region:259206-260735:1
so has part: feature:259206-260735:1:exon

XP_018734330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259206-260735:1:exon

AWJ20_78
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MID1
locus tag: AWJ20_78
so part of: sequence
location: <262714..>264360
location: region:262714-264360:1
so has part: feature:262714-264360:1:exon
subclass of: SO_0000010

30037849
type: Gene
SIO_000068: ncbigene

position:262714:1
position: 262714
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:264360:1
position: 264360
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262714-264360:1:exon

AWJ20_78
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MID1
locus tag: AWJ20_78
product: Mid1p
transcript id: XM_018882742.1
SIO_010081: AWJ20_78
subclass of: SO_0000673
so part of: AWJ20_78
location: <262714..>264360
location: region:262714-264360:1
so has part: feature:262714-264360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262714-264360:1:exon

AWJ20_78
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MID1
locus tag: AWJ20_78
inference: similar to AA sequence:KEGG_Orthology:K08284
note: N-glycosylated integral membrane protein of the ER and plasma membrane; functions as a stretch-activated Ca2+-permeable cation channel required for Ca2+ influx stimulated by pheromone; interacts with Cch1p; forms an oligomer; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA,IEA]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 14729456]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 10958666]; GO_function: GO:0005262 - calcium channel activity [Evidence IEA]; GO_function: GO:0005262 - calcium channel activity [Evidence IMP] [PMID 10958666]; GO_function: GO:0005262 - calcium channel activity [Evidence IMP] [PMID 9343395]; GO_function: GO:0015275 - stretch-activated, cation-selective, calcium channel activity [Evidence IDA] [PMID 10436155]; GO_process: GO:0070588 - calcium ion transmembrane transport [Evidence IEA]; GO_process: GO:0006816 - calcium ion transport [Evidence IEA]; GO_process: GO:0006816 - calcium ion transport [Evidence IDA] [PMID 10958666]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Mid1p
translation: MKSFTICFLWFLTLIPLICAQWIKQEGLLLPNSFLEVASENGEVDPSEPPDMHLDIYDRADHVLSTSQSSSTVVSSSSVIEQDPVTTTMTIPTSGATPIIDSTPIRFTINPGDVHTYELSGINPSAKALFISLNVCNEPFQSVPFDLPQNKTRLTLFATDTNMTDAPMSQIETELGYASIILRDLQSSTSVIEIAGPKLPSGLKSSSWTYEVIASTKALQSDFSFTSNLYLVDTDFANALFITNNFTTSNNVPTENISDFGIYVYQFSNSSNAGDIRRLSQSFCAVNTEGALIDQDNAQMSNTTRGYGNTMKGQIFVSGLNKSETYLAFLTKPSERLVYQAVNFTTKSDTNCQVIFDLDFCSGVAFAVPGNASAFTTETLREFYDDMALNRYGNFSKSLQNIPCNASAETQYSIMRGCDDCANSYKQWLCAITIPRCTDWSNQQSFLFPRPVGQSRNPEINEVIKPGKYKEILPCADLCYSIVQDCSPDFGFFCPKAGRGLEFSYGQRSPNGDISCSYPGAAYIPSTASTGRTISMELILFATLLWIL
SIO_010081: AWJ20_78
subclass of: SO_0000673
so part of: AWJ20_78
location: 262714..264360
location: region:262714-264360:1
so has part: feature:262714-264360:1:exon

XP_018734331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262714-264360:1:exon

AWJ20_79
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PUS4
locus tag: AWJ20_79
so part of: sequence
location: complement(<264410..>265621)
location: region:264410-265621:-1
so has part: feature:264410-265621:-1:exon
subclass of: SO_0000010

30037860
type: Gene
SIO_000068: ncbigene

position:264410:-1
position: 264410
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:265621:-1
position: 265621
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264410-265621:-1:exon

AWJ20_79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PUS4
locus tag: AWJ20_79
product: pseudouridine synthase PUS4
transcript id: XM_018882753.1
SIO_010081: AWJ20_79
subclass of: SO_0000673
so part of: AWJ20_79
location: complement(<264410..>265621)
location: region:264410-265621:-1
so has part: feature:264410-265621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264410-265621:-1:exon

AWJ20_79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PUS4
locus tag: AWJ20_79
inference: similar to AA sequence:KEGG_Orthology:K03177
note: Pseudouridine synthase; catalyzes only the formation of pseudouridine-55 (Psi55), a highly conserved tRNA modification, in mitochondrial and cytoplasmic tRNAs; PUS4 overexpression leads to translational derepression of GCN4 (Gcd- phenotype); GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IMP] [PMID 9358157]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IMP] [PMID 9358157]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0016853 - isomerase activity [Evidence IEA]; GO_function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO_function: GO:0009982 - pseudouridine synthase activity [Evidence IDA,IGI] [PMID 9358157]; GO_process: GO:0009451 - RNA modification [Evidence IEA]; GO_process: GO:0006396 - RNA processing [Evidence IEA]; GO_process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO_process: GO:0006400 - tRNA modification [Evidence IDA] [PMID 9358157]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]
codon start: 1
product: pseudouridine synthase PUS4
translation: MLWIKANLNFLRTVIETRKTVFIAAESRTVNALETTMNGVFAVNKPSGPTSHDIVHKIRDLFNKSSLFEADIKKVTSQYKGGKKSRRQRLPPIKVGHGGTLDPLADGILVIGVGNGTKELPKYLGNCTKVYRATALLGTTTDTYDSEGKVVGRGKTDHITDEMVATALTKLRGDISQIPPIYSALKMGGKKLYEYARSGQPLPREIEARNVTVHELELINGGLQWDHKFSAPAIESPEEERKISIEFEEKSLQSKGLAPPPELFYDGTIPENSKPSPILEIRFSVSSGTYIRTLIHDLGLALGCGAHMVTLTRLQQGNWKVGENAFELTDFTQHPDSYWGPPLQYYLHSGPGETLKNLFPKEEPGPATQDQEENETKEDTALTNVKQKNPDHVQGTETENYKR
SIO_010081: AWJ20_79
subclass of: SO_0000673
so part of: AWJ20_79
location: complement(264410..265621)
location: region:264410-265621:-1
so has part: feature:264410-265621:-1:exon

XP_018734332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264410-265621:-1:exon

AWJ20_80
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SHR5
locus tag: AWJ20_80
so part of: sequence
location: complement(<265857..>266546)
location: region:265857-266546:-1
so has part: feature:265857-266546:-1:exon
subclass of: SO_0000010

30037872
type: Gene
SIO_000068: ncbigene

position:265857:-1
position: 265857
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:266546:-1
position: 266546
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265857-266546:-1:exon

AWJ20_80
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SHR5
locus tag: AWJ20_80
product: Shr5p
transcript id: XM_018882765.1
SIO_010081: AWJ20_80
subclass of: SO_0000673
so part of: AWJ20_80
location: complement(<265857..>266546)
location: region:265857-266546:-1
so has part: feature:265857-266546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:265857-266546:-1:exon

AWJ20_80
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SHR5
locus tag: AWJ20_80
note: Palmitoyltransferase subunit; this complex adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; palmitoylation is required for Ras2p membrane localization; Palmitoyltransferase is composed of Shr5p and Erf2; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0031211 - endoplasmic reticulum palmitoyltransferase complex [Evidence IPI] [PMID 12193598]; GO_component: GO:0042406 - extrinsic component of endoplasmic reticulum membrane [Evidence IDA] [PMID 12379641]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0016409 - palmitoyltransferase activity [Evidence IDA] [PMID 12193598]; GO_process: GO:0018345 - protein palmitoylation [Evidence IDA] [PMID 12193598]; GO_process: GO:0018345 - protein palmitoylation [Evidence IMP] [PMID 16751107]; GO_process: GO:0006612 - protein targeting to membrane [Evidence IMP] [PMID 7532279]
codon start: 1
product: Shr5p
translation: MTEEGDSCSFFNCHEYVVQTSINSVQGRDVLLGGSDLPSSEMTAGSTGDSTVIESMLTDFPNPYVPHNSTAFKQTRIVRIPRIFDTQSYDDQNSCPQFSEYFPGTEPGALTPTFDENGVSHGLSSKSPLESYLTHQEFQTIIKGINERLLRAYYPWTWRNVIGNILSFFTLYMSDYFIKPQIDIDLAGIELFIKTTNESLNDIKIMSLKRSGYLSLDFQIPSQGTSLSS
SIO_010081: AWJ20_80
subclass of: SO_0000673
so part of: AWJ20_80
location: complement(265857..266546)
location: region:265857-266546:-1
so has part: feature:265857-266546:-1:exon

XP_018734333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265857-266546:-1:exon

AWJ20_81
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MDL2
locus tag: AWJ20_81
so part of: sequence
location: <267532..>270087
location: region:267532-270087:1
so has part: feature:267532-270087:1:exon
subclass of: SO_0000010

30037883
type: Gene
SIO_000068: ncbigene

position:267532:1
position: 267532
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:270087:1
position: 270087
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267532-270087:1:exon

AWJ20_81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MDL2
locus tag: AWJ20_81
product: ATP-binding cassette permease MDL2
transcript id: XM_018882775.1
SIO_010081: AWJ20_81
subclass of: SO_0000673
so part of: AWJ20_81
location: <267532..>270087
location: region:267532-270087:1
so has part: feature:267532-270087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267532-270087:1:exon

AWJ20_81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MDL2
locus tag: AWJ20_81
note: Mitochondrial inner membrane half-type ABC transporter; required for respiratory growth at high temperature; localizes to vacuole membrane in response to H2O2; similar to human TAP1 and TAP2 implicated in bare lymphocyte syndrome and Wegener-like granulomatosis; GO_component: GO:0016021 - integral component of membrane [Evidence IBA,IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IDA] [PMID 11251115]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005886 - plasma membrane [Evidence IRD]; GO_component: GO:0005774 - vacuolar membrane [Evidence IDA] [PMID 23509072]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0016887 - ATPase activity [Evidence IEA]; GO_function: GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA,IEA]; GO_function: GO:0015421 - oligopeptide-transporting ATPase activity [Evidence IBA]; GO_function: GO:0015421 - oligopeptide-transporting ATPase activity [Evidence ISA] [PMID 11251115]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006200 - ATP catabolic process [Evidence IEA]; GO_process: GO:0070301 - cellular response to hydrogen peroxide [Evidence IDA] [PMID 23509072]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0090374 - oligopeptide export from mitochondrion [Evidence ISA] [PMID 11251115]; GO_process: GO:0006857 - oligopeptide transport [Evidence ISA] [PMID 11251115]; GO_process: GO:0055085 - transmembrane transport [Evidence IBA,IEA]; GO_proce…
codon start: 1
product: ATP-binding cassette permease MDL2
translation: MSSRYGEFSSGYGRYRSEEERDTVPILPDARGLNHNSPLAGVHNTTRGVLRSVVQFVAVSKRFIYPSEYFYVVSLGTCCFLAGITHAVIAIQVSQLLGFKTSMLFDTDSTSLSGLSGSVPVYGLLKLLSSLNQPEIGTRISSRMRHGYLTEVLDSPYRRQSTTQYWNTILQSSVDHSIKIQQSLANCIWSGIETLGCLLCLIIFLCFILPEAIIFYLVTSLLAVLTVRFSNERIVFTISSPLTWSMLNGILLLIPSVIKDREEDEVNNGLIILMCVFLSQLSIFQLTEKVLSLKVTVREVDEFIQVLANCSIHQGDTSRQESNSEIVNARIQFVDVTFTFPSASEPSLVNFNLTIESGQCIGLVSDSSAEMLGQSAAILDLISGKYAPDSGQVLVDGQDPATIRAISRQIATISAYNMDIIDESIYDYVYKGLIGTKYESYDSVGQHRMIMRACKEAGLWHIAKPQSLQSQAANGTILSVAERLKLTIAKSLVSRPKIILLDQPIALVDQYALPFISSILHQISKNKTTVLVPYYGSGLRLTDRVLLLSHGKIIEDGTHSELSKSCAGYQVLTRHWKSKRRSSVNSLNSSPGILVPEILNAPSKTFTQRISDLKSVSFTNLATATIFCALGVSIVTKIFIGIRITIVSITNDTKYRTAYLISQASFSIAELSIIAGGLIIWCRPAFVLNHSFNSLVNVALFSTVFVCFMVVIIYLNWKLGLITVGYMLLALYNGYLNSKLQAENTNLVIDTYQSKRNQLAESITSRHAFQQFYDNVESEIKRFKRRRSNMKLLYAIMLIITFVTLSIGSLYLLYYNVSMSEVIMVFLIAASFGSLLNGVLFPVSPRNMYID
SIO_010081: AWJ20_81
subclass of: SO_0000673
so part of: AWJ20_81
location: 267532..270087
location: region:267532-270087:1
so has part: feature:267532-270087:1:exon

XP_018734334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267532-270087:1:exon

AWJ20_82
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HNM1
locus tag: AWJ20_82
so part of: sequence
location: <270632..>272203
location: region:270632-272203:1
so has part: feature:270632-272203:1:exon
subclass of: SO_0000010

30037894
type: Gene
SIO_000068: ncbigene

position:270632:1
position: 270632
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:272203:1
position: 272203
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270632-272203:1:exon

AWJ20_82
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HNM1
locus tag: AWJ20_82
product: Hnm1p
transcript id: XM_018882786.1
SIO_010081: AWJ20_82
subclass of: SO_0000673
so part of: AWJ20_82
location: <270632..>272203
location: region:270632-272203:1
so has part: feature:270632-272203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270632-272203:1:exon

AWJ20_82
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HNM1
locus tag: AWJ20_82
note: Plasma membrane transporter for choline, ethanolamine, and carnitine; involved in the uptake of nitrogen mustard and the uptake of glycine betaine during hypersaline stress; co-regulated with phospholipid biosynthetic genes and negatively regulated by choline and myo-inositol; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence ISS] [PMID 2203793]; GO_function: GO:1901235 - (R)-carnitine transmembrane transporter activity [Evidence IMP] [PMID 23755272]; GO_function: GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]; GO_function: GO:0015220 - choline transmembrane transporter activity [Evidence IMP] [PMID 2203793]; GO_function: GO:0015220 - choline transmembrane transporter activity [Evidence IGI] [PMID 3514579]; GO_function: GO:0034228 - ethanolamine transmembrane transporter activity [Evidence IGI] [PMID 3514579]; GO_process: GO:1900749 - (R)-carnitine transport [Evidence IMP] [PMID 23755272]; GO_process: GO:0003333 - amino acid transmembrane transport [Evidence IEA]; GO_process: GO:0006865 - amino acid transport [Evidence IEA,IEA]; GO_process: GO:0015871 - choline transport [Evidence IMP] [PMID 2203793]; GO_process: GO:0015871 - choline transport [Evidence IGI] [PMID 3514579]; GO_process: GO:0034229 - ethanolamine transport [Evidence IGI] [PMID 3514579]; GO_process: GO:0031460 - glycine betaine transport [Evidence IMP] [PMID 16487344]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Hnm1p
translation: MEEPGNSKNIVTQYDDALLLEQIGYKQELKRSFSLLTMAGWCFGVTSFWTAIGGSLVDTMNAGGPIALVWGWVIVCAFSLMVALSLAELTSAYPVAGGQYSWVLILSRGTKWGRGLSYATAFVQLAGLFSLGSTALYQFGSFTCGMAVLNSDGETWRPTNWQVVLVCWAICFVCLLINIFMNKMLHHIGNFGLWWTIGGFVVCTVTILAVSKHKQDASFVFTAYTNNSGWNDNGMAALFLLNAAFAMCCYDAACHMGEEMDNASRDTARAVVLSVVIGFFTGFAFILALLFCLQDFDAVANTVTGVPLLEIFYQATNNSKAGATCLTVIVVVCQVLASNGMITEGSRSLYAFARDDAFPYQISKYIGTVNSKYDVPIYALIICALFQCAFIAIYFGSSTAFFTVMSIGTVGLYVSYLVPILVVMFRRKHKAVGYYNLGKWGHWVNAPAALYLIYCSVCFFFPTTLPITGDNMNYTPVAFAICAILGLLSWFLGGRHTYATQTESVIIEGVGNEPVVEIVEQKN
SIO_010081: AWJ20_82
subclass of: SO_0000673
so part of: AWJ20_82
location: 270632..272203
location: region:270632-272203:1
so has part: feature:270632-272203:1:exon

XP_018734335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270632-272203:1:exon

AWJ20_83
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: VBA5
locus tag: AWJ20_83
so part of: sequence
location: <277639..>279300
location: region:277639-279300:1
so has part: feature:277639-279300:1:exon
subclass of: SO_0000010

30037905
type: Gene
SIO_000068: ncbigene

position:277639:1
position: 277639
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:279300:1
position: 279300
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277639-279300:1:exon

AWJ20_83
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: VBA5
locus tag: AWJ20_83
product: Vba5p
transcript id: XM_018882797.1
SIO_010081: AWJ20_83
subclass of: SO_0000673
so part of: AWJ20_83
location: <277639..>279300
location: region:277639-279300:1
so has part: feature:277639-279300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277639-279300:1:exon

AWJ20_83
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: VBA5
locus tag: AWJ20_83
note: Plasma membrane protein of the Major Facilitator Superfamily (MFS); involved in amino acid uptake and drug sensitivity; VBA5 has a paralog, VBA3, that arose from a segmental duplication; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 23047103]; GO_component: GO:0005774 - vacuolar membrane [Evidence IEA]; GO_component: GO:0005773 - vacuole [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0022857 - transmembrane transporter activity [Evidence IEA]; GO_process: GO:0006865 - amino acid transport [Evidence IEA]; GO_process: GO:0015809 - arginine transport [Evidence IGI,IMP] [PMID 23047103]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Vba5p
translation: MFTSSIHSKNQSVDISNSKTTEGSDAPVDLFVDLEQVEDSGDGTTSDQQILHGFKLVLCSVSLLLCMFIFALDQTITVTLLETVGNKFNSFGKISWITIGFFLPVAVLSMSWGSISLIFGRKICMLISIVLFEAGSLMCALAPSMNVLIGGRIIAGIGGGGIQTMVFLILTEIVTIEKRGLMISFIGLSFGIASVVAPLIGGALTTHVSWRWCFYINLPIGAAAFFCIALLFNPPKVAGSFKEKIKKVDYIGVLLLAIGLSCLLLPLSFGSSTSPWNSAEVISLFVIGFFGCIAFFIYNFFISKVPLIPRRIAKVAQVVLPCLGLFGCYGALMIGCIFLATFFQVVKGADGMQSGIDILPLILPTILAIIFSGAIVSKKGITKPLAIVGSALSTVGFGLLTLLNENSPSSKRIGYQILAGVGLGLLVQPMTISAQIASPKSNGGVLIATSMVTLFRSLGSILGSSLGQVVLNVVFGNKLNDYGAVVGFTTRDIVNNPGLIAALPEDKIPLAIKAFVEGYRDVMFLGMAFSIIAFLTTPFYTNKRVPIAPKSQD
SIO_010081: AWJ20_83
subclass of: SO_0000673
so part of: AWJ20_83
location: 277639..279300
location: region:277639-279300:1
so has part: feature:277639-279300:1:exon

XP_018734336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277639-279300:1:exon

AWJ20_84
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YSP2
locus tag: AWJ20_84
so part of: sequence
location: <281146..>283800
location: region:281146-283800:1
so has part: feature:281146-283800:1:exon
subclass of: SO_0000010

30037916
type: Gene
SIO_000068: ncbigene

position:281146:1
position: 281146
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:283800:1
position: 283800
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281146-283800:1:exon

AWJ20_84
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YSP2
locus tag: AWJ20_84
product: Ysp2p
transcript id: XM_018882808.1
SIO_010081: AWJ20_84
subclass of: SO_0000673
so part of: AWJ20_84
location: <281146..>283800
location: region:281146-283800:1
so has part: feature:281146-283800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281146-283800:1:exon

AWJ20_84
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YSP2
locus tag: AWJ20_84
note: Protein involved in programmed cell death; mutant shows resistance to cell death induced by amiodarone or intracellular acidification; YSP2 has a paralog, YHR080C, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 24390141]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0031966 - mitochondrial membrane [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16962064]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006915 - apoptotic process [Evidence IEA]; GO_process: GO:0006915 - apoptotic process [Evidence IMP] [PMID 16962064]
codon start: 1
product: Ysp2p
translation: MTDSESSSYHHQARGVPFKPSEHEHRRGHRDLLKALSDHPKSGSNGNLTRTSSASSKTSEHPSAVESTSNEDGLSHSESFGYHSSKSEDHSHASSASHFLSSVLTVAQNAANSLAGLKNGEHEESSRSYSEADESESVSEASMSHQRGEDGKLSEVKIEPVRSTISTMGKGELSLATLGFSRDSGSQHRAATPSGEGKKSPQLTDSLKPTSPNANEGYVSGGEGEFNLPEFHSNKFKRSVSITRNRSRRNTNKSMEQPPFRAVSSSTVSTESNEDEDSPEDSVTAFPEGADGDHHLTGFAYANQKRNKEFHRLFKSVQPDDYLLDDFNCALSKEILIQGKMYVSERHVCFNSNILGWVTNLVIAFDEIVTMEKKMTAGLFPNGIVIQTLHARHSFASFVNRDSVIDFLMSIWKKSSPHQPNRSEAYANGSAVNMSDSESTSSTDKERNREVDSDDGSFSYGSSGEVISDELDTDDEFGETARDSPSESANKDSSGGKAPAAGNGSGDGAGADSGSGSGSWPVPLEGPETHAPTDLPALDANDKELATETIHAPLGIVANLLFGSDSTWYKKFLTENQKNIKLGEVPPFEADGGNKTRHYEYVKPLSGPVGPKQTKCISTDTIEKWDLENYVVVTTATSTPDVPSGGSFVTKSRTGLCWAPGNSTKIVISYHIEWSAKSWLKGPIEKGALDGQTQYAKDLVAAINNTLKSKSKSKAPGGIAVTHKKPLKKKRREKVKKVKIDVASAPKSSLEKFMNLLTENPVPGVPLPTWALLTIGIILFSAIRWMFFSPSVPTEVEQARLMRVEEEYQMWKWFEDRGRVGHPLVHRGEGKFDDGDILRYPIFQPGVSSHVKGKKGSYSEQEVLEAIRITEHRLSILKERLNST
SIO_010081: AWJ20_84
subclass of: SO_0000673
so part of: AWJ20_84
location: 281146..283800
location: region:281146-283800:1
so has part: feature:281146-283800:1:exon

XP_018734337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281146-283800:1:exon

AWJ20_85
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_85
so part of: sequence
location: complement(<283843..>284679)
location: region:283843-284679:-1
so has part: feature:283843-284679:-1:exon
subclass of: SO_0000010

30037927
type: Gene
SIO_000068: ncbigene

position:283843:-1
position: 283843
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:284679:-1
position: 284679
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283843-284679:-1:exon

AWJ20_85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_85
product: hypothetical protein
transcript id: XM_018882819.1
SIO_010081: AWJ20_85
subclass of: SO_0000673
so part of: AWJ20_85
location: complement(<283843..>284679)
location: region:283843-284679:-1
so has part: feature:283843-284679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283843-284679:-1:exon

AWJ20_85
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_85
codon start: 1
product: hypothetical protein
translation: MSADSTLYTNALATSDQLNSTKAVGHGTGKDSAFHNRFLTANFIQTAGIYLRLSQTVISRAIVLAQRFYTTTGLRDFPIHDVAAAVLLISSKLVSGHPIKPEQLCYVVQFLSLNGNLVFEHDVQTFSVPQTFDVIDTWKQISPTEMEVLAGLAFDTNVVLPYSLALSYIQVLSLHERAGSDIIKLTWSTINDGIRDSPFLTIVHQPNTIAVTSIILAATKLNVVVSDQVNWWDMFDVNSEDVGHSMALILEGKEYASYIRNQNSHTIDTNTKQNKIIK
SIO_010081: AWJ20_85
subclass of: SO_0000673
so part of: AWJ20_85
location: complement(283843..284679)
location: region:283843-284679:-1
so has part: feature:283843-284679:-1:exon

XP_018734338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283843-284679:-1:exon

AWJ20_86
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_86
so part of: sequence
location: <285576..>287024
location: region:285576-287024:1
so has part: feature:285576-287024:1:exon
subclass of: SO_0000010

30037938
type: Gene
SIO_000068: ncbigene

position:285576:1
position: 285576
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:287024:1
position: 287024
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285576-287024:1:exon

AWJ20_86
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_86
product: hypothetical protein
transcript id: XM_018882829.1
SIO_010081: AWJ20_86
subclass of: SO_0000673
so part of: AWJ20_86
location: <285576..>287024
location: region:285576-287024:1
so has part: feature:285576-287024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285576-287024:1:exon

AWJ20_86
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_86
inference: similar to AA sequence:KEGG_Orthology:K00773
codon start: 1
product: hypothetical protein
translation: MTSDSMASSSFQTIKAASSSTSLARIGALKVRSNSSPVRTPTFLCPTSRGVIPHLSPDNVVKCETTASVGALISVEDFMEKAPQQNSALLKYPGPTRDLFSFPSKFGLALSHRRPVPVPSPQANFDDKVSVMTPEGFKYMTVDMYSEFITKFEPDMVFSIPDIPNLSPGGKPGNNRAQKMLKRTEKWLDELLEQRSKHTTGFEIFAPILPGLAAEFQSNYLQKIKSDARITGISLWNAQAARLSERQAELAKKRDVAKHSGASLDGEAAISTVTSYVKALHEDVSRLAVAYNSGLETPHEVLDLVNSGVDLFVATGINDFTDAGVALDFTFPASEEHPDFGFNLWDPKYATDMTNFGRANRDTVPNTYYRAYVHHLLNAREMTSWVLLQMHNIAVFNRFFEGIQKSIENGTFEQEREKFVKVYGTSEEVQVFRDLYKKKDSVPTVRGYHISYESEVIRRGEGSTQRLNDPPFKKYKEDASQN
SIO_010081: AWJ20_86
subclass of: SO_0000673
so part of: AWJ20_86
location: 285576..287024
location: region:285576-287024:1
so has part: feature:285576-287024:1:exon

XP_018734339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285576-287024:1:exon

AWJ20_87
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_87
so part of: sequence
location: <287209..>287326
location: region:287209-287326:1
so has part: feature:287209-287326:1:exon
subclass of: SO_0000663

30037949
type: Gene
SIO_000068: ncbigene

position:287209:1
position: 287209
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:287326:1
position: 287326
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287209-287326:1:exon

AWJ20_87
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_87
product: tRNA-Pro
SIO_010081: AWJ20_87
subclass of: SO_0000673
so part of: AWJ20_87
location: <287209..>287326
location: region:287209-287326:1
so has part: feature:287209-287326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287209-287326:1:exon

AWJ20_88
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ERG13
locus tag: AWJ20_88
so part of: sequence
location: complement(<290253..>291464)
location: region:290253-291464:-1
so has part: feature:290253-291464:-1:exon
subclass of: SO_0000010

30037960
type: Gene
SIO_000068: ncbigene

position:290253:-1
position: 290253
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:291464:-1
position: 291464
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290253-291464:-1:exon

AWJ20_88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ERG13
locus tag: AWJ20_88
product: hydroxymethylglutaryl-CoA synthase
transcript id: XM_018882849.1
SIO_010081: AWJ20_88
subclass of: SO_0000673
so part of: AWJ20_88
location: complement(<290253..>291464)
location: region:290253-291464:-1
so has part: feature:290253-291464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290253-291464:-1:exon

AWJ20_88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ERG13
locus tag: AWJ20_88
inference: similar to AA sequence:KEGG_Orthology:K01641
note: 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase; catalyzes the formation of HMG-CoA from acetyl-CoA and acetoacetyl-CoA; involved in the second step in mevalonate biosynthesis; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004421 - hydroxymethylglutaryl-CoA synthase activity [Evidence IEA,IEA]; GO_function: GO:0004421 - hydroxymethylglutaryl-CoA synthase activity [Evidence IMP] [PMID 6148937]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0006696 - ergosterol biosynthetic process [Evidence IMP] [PMID 6148937]; GO_process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0006694 - steroid biosynthetic process [Evidence IEA]; GO_process: GO:0008202 - steroid metabolic process [Evidence IEA]; GO_process: GO:0016126 - sterol biosynthetic process [Evidence IEA]
codon start: 1
product: hydroxymethylglutaryl-CoA synthase
translation: MAFVDDREDIYSFALTAVSKLLKKNNIDPASIGRLEVGTETLLDKSKSVKSVLMQLFGDNADIEGVDTINACYGGTNALFNAINWVESSSWDGRNAIVVAGDIAIYSKGAARPTGGAGVVALLIGPDAPLVFDPVHGSYMQHAYDFYKPDLTSEYPVVDGHFSLTCYTRALDQAYKSYNKKAEKRHLFTASEEKQGIKRFDYSVFHVPTCKLVSKCYGRLHYNDYLENPAAFADAEIPAEVKSVDYEASLTDKVVEKTFLNIAKDASKTRLAPSLIGPTNTGNMYTASVYSSLASLLTFVPADELAGKRVSLFSYGSGLASSFYSLVIKGDIAPLVKNLEFKKLLDDRTTVTPTEYEAALALREKAHLQKSFKPTGSVDALREGTYYLTEVDDKFRRSYAVKN
SIO_010081: AWJ20_88
subclass of: SO_0000673
so part of: AWJ20_88
location: complement(290253..291464)
location: region:290253-291464:-1
so has part: feature:290253-291464:-1:exon

XP_018734340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290253-291464:-1:exon

AWJ20_89
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: LDB17
locus tag: AWJ20_89
so part of: sequence
location: <295364..>296728
location: region:295364-296728:1
so has part: feature:295364-296728:1:exon
subclass of: SO_0000010

30037971
type: Gene
SIO_000068: ncbigene

position:295364:1
position: 295364
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:296728:1
position: 296728
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295364-296728:1:exon

AWJ20_89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: LDB17
locus tag: AWJ20_89
product: Ldb17p
transcript id: XM_018882859.1
SIO_010081: AWJ20_89
subclass of: SO_0000673
so part of: AWJ20_89
location: <295364..>296728
location: region:295364-296728:1
so has part: feature:295364-296728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295364-296728:1:exon

AWJ20_89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: LDB17
locus tag: AWJ20_89
note: Protein involved in the regulation of endocytosis; transiently recruited to actin cortical patches in a SLA1-dependent manner after late coat component assembly; GFP-fusion protein localizes to the periphery, cytoplasm, bud, and bud neck; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 19506040]; GO_component: GO:0005933 - cellular bud [Evidence IEA]; GO_component: GO:0005933 - cellular bud [Evidence IDA] [PMID 14562095]; GO_component: GO:0005935 - cellular bud neck [Evidence IEA]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006897 - endocytosis [Evidence IMP] [PMID 19506040]
codon start: 1
product: Ldb17p
translation: MLVLGLEDLSVPWRILIGAVLLVDGRLHKSTLEMLQEEAAISLIVETLWQDRFSNIRLQRIFLELLYEMCRIQKIPIRELQKISKEFLEFLFSVVENKAGYDTTDPYNMAAMKVILALNEQYMIAVLSGHSPDESDEEEQEENANQESISLRNKTFDILKKDGDMYRAFGENMVFIFNRGADKCIQLMMLKLLYLIFTTKETFQYMYLNDLKVVVGVIIRELHDLPFEEEDLRNTYLRILHPLLQNTQIRYEQYKKDELLSLLEVFANPSCANSHAISENTQRLAYRCLRVDWLGYCSPIISPITSLSEQNTGVSIETRSSSNSEYIDRKQTSSVPLIEMSPVTSISSASSSTTDVTEMPKLRHSSSHNHLLVTHHKRPPRPSPRKLQAMQIRNTSAIEVATLVKTHTPPPPPPRHRNLSLPGSQILEGRPSSTPPPPPRPRMMRIGTPVGPCP
SIO_010081: AWJ20_89
subclass of: SO_0000673
so part of: AWJ20_89
location: 295364..296728
location: region:295364-296728:1
so has part: feature:295364-296728:1:exon

XP_018734341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295364-296728:1:exon

AWJ20_90
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_90
so part of: sequence
location: complement(<296823..>297761)
location: region:296823-297761:-1
so has part: feature:296823-297761:-1:exon
subclass of: SO_0000010

30037983
type: Gene
SIO_000068: ncbigene

position:296823:-1
position: 296823
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:297761:-1
position: 297761
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296823-297761:-1:exon

AWJ20_90
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_90
product: glyoxylate reductase
transcript id: XM_018882871.1
SIO_010081: AWJ20_90
subclass of: SO_0000673
so part of: AWJ20_90
location: complement(<296823..>297761)
location: region:296823-297761:-1
so has part: feature:296823-297761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296823-297761:-1:exon

AWJ20_90
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_90
note: Glyoxylate reductase; acts on glyoxylate and hydroxypyruvate substrates; YPL113C is not an essential gene; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0048037 - cofactor binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IMP] [PMID 17173333]; GO_process: GO:0008152 - metabolic process [Evidence IMP] [PMID 17173333]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: glyoxylate reductase
translation: MLITWSGFTSVGGMNTDLVDALPVSLKVIGLPHVGYDHFDWEAIKKRGVIMCNSPGMSDNDVADIGLHLILSTYRSTSLFESTLRSQKNAALARRVVLNFDQDTGRADPGNEPMDPMKYVHGHRVGERVVTSPAGQRVGIAGFGGIGRALAKRLHVLGMTIHYFKRSQLSQKELKSLEGIPLVRHESFESLAKESDVLVLALPLSSSTRHIVNDKTIGILPAEARVINVGRGPLVDQAALLRGLKSGKLSGAGLDVFEHEPIIEEELLSRYDVTLLPHIGACTQKAVERALINSLENIKNVVVDGGHGIHPI
SIO_010081: AWJ20_90
subclass of: SO_0000673
so part of: AWJ20_90
location: complement(296823..297761)
location: region:296823-297761:-1
so has part: feature:296823-297761:-1:exon

XP_018734342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296823-297761:-1:exon

AWJ20_91
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_91
so part of: sequence
location: <300065..>300874
location: region:300065-300874:1
so has part: feature:300065-300874:1:exon
subclass of: SO_0000010

30037994
type: Gene
SIO_000068: ncbigene

position:300065:1
position: 300065
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:300874:1
position: 300874
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300065-300874:1:exon

AWJ20_91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_91
product: hypothetical protein
transcript id: XM_018882880.1
SIO_010081: AWJ20_91
subclass of: SO_0000673
so part of: AWJ20_91
location: <300065..>300874
location: region:300065-300874:1
so has part: feature:300065-300874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300065-300874:1:exon

AWJ20_91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_91
codon start: 1
product: hypothetical protein
translation: MSNYLQFTKTLHITKPTLYGEWHNGPALLELIDKFCDNLRILDFTMAGSSSWCAYLPKIPQVTCVRGRSKDISETAAASFAEFRIDDLSNSFTNLQEVSLSGLQVCFNRKADTDPLPLPKLTTLSLNDCSWEYPSQIDDLGSVTDLRVVYSTHHFTHSERLRTFALSPPKTLKSLVIDIKSAYSDDNPTDVAWQPLLKHQCKGLVSLEVRGFNFPGEEFFLALPAALTKLKISCRSGKQLSTSSWLILKQHKRRNQSFSMLLNNELVRL
SIO_010081: AWJ20_91
subclass of: SO_0000673
so part of: AWJ20_91
location: 300065..300874
location: region:300065-300874:1
so has part: feature:300065-300874:1:exon

XP_018734343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300065-300874:1:exon

AWJ20_92
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RCY1
locus tag: AWJ20_92
so part of: sequence
location: complement(<300953..>303595)
location: region:300953-303595:-1
so has part: feature:300953-303595:-1:exon
subclass of: SO_0000010

30038005
type: Gene
SIO_000068: ncbigene

position:300953:-1
position: 300953
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:303595:-1
position: 303595
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300953-303595:-1:exon

AWJ20_92
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RCY1
locus tag: AWJ20_92
product: Rcy1p
transcript id: XM_018882891.1
SIO_010081: AWJ20_92
subclass of: SO_0000673
so part of: AWJ20_92
location: complement(<300953..>303595)
location: region:300953-303595:-1
so has part: feature:300953-303595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300953-303595:-1:exon

AWJ20_92
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RCY1
locus tag: AWJ20_92
inference: similar to AA sequence:KEGG_Orthology:K15071
note: F-box protein involved in recycling endocytosed proteins; involved in recycling plasma membrane proteins internalized by endocytosis; localized to sites of polarized growth; direct interaction with C-terminal cytoplasmic region of Drs2p plays an important role for Drs2p function in endocytic recycling pathway; GO_component: GO:0005794 - Golgi apparatus [Evidence IDA] [PMID 15537705]; GO_component: GO:0051286 - cell tip [Evidence IEA]; GO_component: GO:0005935 - cellular bud neck [Evidence IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005768 - endosome [Evidence IDA] [PMID 15537705]; GO_component: GO:0030427 - site of polarized growth [Evidence IDA] [PMID 11287615]; GO_function: GO:0000149 - SNARE binding [Evidence IMP,IPI] [PMID 11287615]; GO_function: GO:0000149 - SNARE binding [Evidence IPI] [PMID 15537705]; GO_process: GO:0034498 - early endosome to Golgi transport [Evidence IMP] [PMID 15537705]; GO_process: GO:0032456 - endocytic recycling [Evidence IMP] [PMID 24272750]; GO_process: GO:0006897 - endocytosis [Evidence IMP] [PMID 10769031]; GO_process: GO:0006897 - endocytosis [Evidence IMP] [PMID 11378903]; GO_process: GO:0006887 - exocytosis [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0048278 - vesicle docking [Evidence IEA]
codon start: 1
product: Rcy1p
translation: MTSKTFSESRSIPMGTGSFQALVPSRVQKSTLLSGSIFDNSKIVTIIAEYLPVPDLCNLAQVSKICKNAVYAPYLWQQRLENVNVHAGTSSSTNKNSDPLTIFDGFKYNPSDTRSSCLKLYRALGVFYYDLVNNPETSHVFSHAFTDPVDQAKLLGQLKRFSTIDPIQDGYDENISRLNSTIDLFENAALSEFEKGIDESHDADIDSTKLEAVVEHIKKYANVLVTLNGGDSCVQLFIQKHPLIMDQPKIPPLDFLDDSLKLKSQEFQGYLQNICNILNRDSKTIDMIFSNTIAVMTPLFERVLEENIMETVSTIIDSLLHKSKFAFLAAVPEIYSYILVFEDQLEPGINSGDNFKKMVSTSIDDFYSLYIDNYLEKELERFTEYAESEVSKWSREIQDTEEATESFLWSNVTKEKDKTDFLTSFKKVLLMPVSVISSSSGNGNNNNNNNASSTYKSENISTTSLPGTVPPSFSSKLTSAPPSRQSMTSSPVPFRTTQTTPIPPSSELDAMVAVMNSKLESIKTLFSLELAVNIIREGKESIERMGRFVNMGGEGTHAKSQCEAIFIELIHTLGERHVKGGFSKAIQTLNLYDPKQHRKTVTGTEANGEELAAVEPLAIFAELVNIGDLIQQMVHVFFEEELGLRRYVDRNDFLSPSLKAKKKFEQMLDDCVANGLSRGIDVLIDQIDFLFVTVQLGSDYNPIVGLPQNNGFGGGMFGGLGMSGDLGPTTAAQKVVTLLSSHMTLLVGSTEKSVLDVFQQEVGLRFFGSVCKHIKRQVISTDGAINLISDLNYYYSFILGLKQKELVPYFAALKEVGQLFLIDGGDSKALGATLSDMVRFRGVFKPEELLEFVECRKDWTLVRRDVEKVMYGFGIDCVMM
SIO_010081: AWJ20_92
subclass of: SO_0000673
so part of: AWJ20_92
location: complement(300953..303595)
location: region:300953-303595:-1
so has part: feature:300953-303595:-1:exon

XP_018734344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300953-303595:-1:exon

AWJ20_93
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SGD1
locus tag: AWJ20_93
so part of: sequence
location: <303972..>306851
location: region:303972-306851:1
so has part: feature:303972-306851:1:exon
subclass of: SO_0000010

30038016
type: Gene
SIO_000068: ncbigene

position:303972:1
position: 303972
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:306851:1
position: 306851
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303972-306851:1:exon

AWJ20_93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SGD1
locus tag: AWJ20_93
product: Sgd1p
transcript id: XM_018882901.1
SIO_010081: AWJ20_93
subclass of: SO_0000673
so part of: AWJ20_93
location: <303972..>306851
location: region:303972-306851:1
so has part: feature:303972-306851:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303972-306851:1:exon

AWJ20_93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SGD1
locus tag: AWJ20_93
inference: similar to AA sequence:KEGG_Orthology:K17583
note: Essential nuclear protein; required for biogenesis of the small ribosomal subunit; has a possible role in the osmoregulatory glycerol response; putative homolog of human NOM1 which is implicated in acute myeloid leukemia; GO_component: GO:0097078 - FAl1-SGD1 complex [Evidence IPI] [PMID 21576267]; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 11042259]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA,ISS] [PMID 11042259]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006972 - hyperosmotic response [Evidence IGI] [PMID 11042259]; GO_process: GO:0006972 - hyperosmotic response [Evidence IGI] [PMID 12073033]; GO_process: GO:0042274 - ribosomal small subunit biogenesis [Evidence IMP] [PMID 19806183]
codon start: 1
product: Sgd1p
translation: MSRKRKSADDAEDDYQGIKLPPALLNELSQKGDHDETIHQPSLRRNRVTRATRKENRKLERQKKKNKRSGKPQQEEAPKNAANGAKKFNKKVALPKDDESEGDFDDFDGFKDGSGTDDFDLNEDDFEDLGSEDDSPMSALDTMAALKKMKEKKNSKPLTAADTMAALKAAKEKKTKVDNQVEKVKSNKISKGEKESEVLEDLKSGGDSMSVEETMAALKAAKEGKRKPGEVSDHSKKKRKTESKDSKGTSKKASLTKSKPDRVISERDKFLMAQDEEDIDFYAKKLGLKSYKLGGSKQKKSKDELDDGFDDILGGLDFEKFASGSETEDSENELSDSISLNERDREGERSSDESDDAEDEDDEDEEDEEADEEEEEEQKPKENPYVAPTVSSGKYVPPSKRRLLAQSNDNEAESEELIVLRRQLKGLINRLSESNMGSIINEIEALYQRNPRSHVNSTITTIIIESTSLQGTLLESFLIIHAALVTALYRTMGVEFGAHFVQTLVEEFEKHYKQGGGKEASNLLSLLSEIYTFQLVSCKLMYDFVRLFLQDVNEVNTEFLLKIVRNSGPQLRSDDPSSLKEIIYLLQSAVSKAEPTTINSRTKFLIESITALKNNRQKIANEMSIASTQRMKKFLGTISGLTSEPLQVSLDDIHNINTKGKWWLVGAAYNNNNGSVGNKTTPDVDIDAMNDILDTAEPNWMELAKKQRMNTDVRKAVFVALMTSEDYIDSCDRLQKLRLKSKQEREIPKVILHCCSNEEVYNPFYALVAGKLCGQHSLKKTFQFCLWDFLSELQGDEDSSDEEDGLGKLAKRSEANDKDVLRRVSHLAKFYGAIVAKGDMSLDTLKAVDFLTAVTEIKLFLEIFFISFFEIIGKNAEKGTGSQTKKNGFGNAMFGIRRNEKELAQILIKTKDQTVLRGIQYFQKFVTSSSLLPTKEKQKDRVIWGSSTMSDLVEGLLTH
SIO_010081: AWJ20_93
subclass of: SO_0000673
so part of: AWJ20_93
location: 303972..306851
location: region:303972-306851:1
so has part: feature:303972-306851:1:exon

XP_018734345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303972-306851:1:exon

AWJ20_94
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CAB4
locus tag: AWJ20_94
so part of: sequence
location: complement(<306924..>307952)
location: region:306924-307952:-1
so has part: feature:306924-307952:-1:exon
subclass of: SO_0000010

30038027
type: Gene
SIO_000068: ncbigene

position:306924:-1
position: 306924
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:307952:-1
position: 307952
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306924-307952:-1:exon

AWJ20_94
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CAB4
locus tag: AWJ20_94
product: putative pantetheine-phosphate adenylyltransferase
transcript id: XM_018882911.1
SIO_010081: AWJ20_94
subclass of: SO_0000673
so part of: AWJ20_94
location: complement(<306924..>307952)
location: region:306924-307952:-1
so has part: feature:306924-307952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306924-307952:-1:exon

AWJ20_94
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CAB4
locus tag: AWJ20_94
inference: similar to AA sequence:KEGG_Orthology:K02201
note: Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; probable pantetheine-phosphate adenylyltransferase (PPAT); PPAT catalyzes the fourth step in the biosynthesis of coenzyme A from pantothenate; null mutant lethality is complemented by E. coli coaD (encoding PPAT); widely conserved; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14690591]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14690591]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO_function: GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]; GO_function: GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence ISS] [PMID 11923312]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0009058 - biosynthetic process [Evidence IEA]; GO_process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO_process: GO:0015937 - coenzyme A biosynthetic process [Evidence ISS] [PMID 11923312]; GO_process: GO:0015937 - coenzyme A biosynthetic process [Evidence IGI] [PMID 19266201]
codon start: 1
product: putative pantetheine-phosphate adenylyltransferase
translation: MLYCSTVALIQGGPASAIPTKYSEFIGKCLHMTMPNGKLDIMVLKTPPTLVEAERTVRCLYDIARKEAARQGITSHKIDVTVLLDGLDIEVNRNQTWEVVAASKFELELPKLLRSLVPDNSDIQLLPVVLLGGGINTGVSLGGTPGGLTTPMNKKYQEIEEMEQKKETDAARHGETLYSRTWEYNVIALGGTFDHLHEGHKLLLTMAGYLARECLIVGITGPELLKNKKYAQAMQSYMERKESVRNFLNYVYPSLDLDIVMINDIYGPTAQVKEIDGLVVSKETAAGGDSVNKLRSEKGWPELVIFEVGLISDSDSGDDSDKVSSTQLRKEEIEQREKREKL
SIO_010081: AWJ20_94
subclass of: SO_0000673
so part of: AWJ20_94
location: complement(306924..307952)
location: region:306924-307952:-1
so has part: feature:306924-307952:-1:exon

XP_018734346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306924-307952:-1:exon

AWJ20_95
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CWC22
locus tag: AWJ20_95
so part of: sequence
location: <311106..>314132
location: region:311106-314132:1
so has part: feature:311106-314132:1:exon
subclass of: SO_0000010

30038038
type: Gene
SIO_000068: ncbigene

position:311106:1
position: 311106
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:314132:1
position: 314132
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311106-314132:1:exon

AWJ20_95
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CWC22
locus tag: AWJ20_95
product: Cwc22p
transcript id: XM_018882921.1
SIO_010081: AWJ20_95
subclass of: SO_0000673
so part of: AWJ20_95
location: <311106..>314132
location: region:311106-314132:1
so has part: feature:311106-314132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311106-314132:1:exon

AWJ20_95
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CWC22
locus tag: AWJ20_95
inference: similar to AA sequence:KEGG_Orthology:K13100
note: Spliceosome-associated protein that is required for pre-mRNA splicing; necessary for Prp2p function at the first catalytic step of splicing; has similarity to S. pombe Cwf22p; CWC22 is an essential protein; GO_component: GO:0071006 - U2-type catalytic step 1 spliceosome [Evidence IDA] [PMID 20956557]; GO_component: GO:0005684 - U2-type spliceosomal complex [Evidence IDA] [PMID 11884590]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005681 - spliceosomal complex [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008380 - RNA splicing [Evidence IEA]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]; GO_process: GO:0000398 - mRNA splicing, via spliceosome [Evidence IDA] [PMID 20956557]
codon start: 1
product: Cwc22p
translation: MSRADSRILRPYEEPSTDGGLVDSHETGPAKIANGSSSRQLEDEHQNHSRNFNPNDTPERYQNGRGYERKSSDWTRDPGRGRSRSRSRRRTPPRYRRNGLDRKGSPHSRDSRNYSRSPEPQNARNGGRQRRQQETRPKLFDVDGKRKAERERQAMERELQPEPEPATPLDPAEEYKRLMDLRSGGRYVPPAKLRALQEQIIKSQSSSSKEYQRLEWDKLKKSINGLINKVNVGNIREIIQLIFQENIIRGRGVLCRSIMRAQSLSLAYTPVYASLVAVINSKLPEIGELLVKRLVIQFRRSFKRNDKTMCIASGTFLAHLVNQQVAHEILCLEIMHLLLLHPTDDSVEIAVGFVKEAGLFLSENSSTAFNGVYERLRVILRESNLEKRTQYMIETLFQIIKDQFRDNPSIPKGLDLVEEDDQNIHMVSLDDELKGEETLNVFRFDDKYDENEESYKQIKKDILGDSDEEEESEEENEAENEQSEDESENEDEVEASVSATQDVASDAGKVVVQDMTNSALISLRRTIYLTVMSTMSIDEVCHKLTRIQVPSGHEIEVVNMLVECCSQEKIYNKIYGGVGSRLCRMGRQWQDLFNRAFEHYYEIIHRYDTNKLRNIATMFGFILASDSMSWSVFQIIKMSEESSTSSSRIFVKLLFQEIQQEIGINELVKRLKEPYLQQYLVNLMPKGDDLDATRFSINYFTAIGLGAVTEDMREYLKNLPPPPPVTDSRSSSLSRSDSRSRSRSRSRSLSSRSRSRSRSYDSRSRSRSYDSRSRSRSRSRSYDSHSRSRSRSRSISLSRSPPRTRKNRSLSRSSSLSSQGRVRKRARGRSYSRSLSRSMSQSRSDSRSVSRGRALSRSISRGRSYSRSYSRSRSDSRSRSYSRSRRNSTKSYSDSRSRSRSYSRSPARGRRYSRPSSTRRTRSYSDSRSRSDRSRSISRSRSPSHSRSLSRSLSRSRSRSHTPPSLSPPPPKRKAAAKSPPQKRHQSVSPPHDSEPTAKRRAKASDYL
SIO_010081: AWJ20_95
subclass of: SO_0000673
so part of: AWJ20_95
location: 311106..314132
location: region:311106-314132:1
so has part: feature:311106-314132:1:exon

XP_018734347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311106-314132:1:exon

AWJ20_96
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: LPD1
locus tag: AWJ20_96
so part of: sequence
location: <315673..>316830
location: region:315673-316830:1
so has part: feature:315673-316830:1:exon
subclass of: SO_0000010

30038049
type: Gene
SIO_000068: ncbigene

position:315673:1
position: 315673
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:316830:1
position: 316830
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315673-316830:1:exon

AWJ20_96
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: LPD1
locus tag: AWJ20_96
product: dihydrolipoyl dehydrogenase
transcript id: XM_018882930.1
SIO_010081: AWJ20_96
subclass of: SO_0000673
so part of: AWJ20_96
location: <315673..>316830
location: region:315673-316830:1
so has part: feature:315673-316830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315673-316830:1:exon

AWJ20_96
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: LPD1
locus tag: AWJ20_96
inference: similar to AA sequence:KEGG_Orthology:K00382
note: Dihydrolipoamide dehydrogenase; the lipoamide dehydrogenase component (E3) of the pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase multi-enzyme complexes; LPD1 has a paralog, IRC15, that arose from the whole genome duplication; GO_component: GO:0005960 - glycine cleavage complex [Evidence IMP] [PMID 7498764]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0042645 - mitochondrial nucleoid [Evidence IDA] [PMID 10869431]; GO_component: GO:0042645 - mitochondrial nucleoid [Evidence IDA] [PMID 11926067]; GO_component: GO:0009353 - mitochondrial oxoglutarate dehydrogenase complex [Evidence IDA] [PMID 2072900]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA,IEA]; GO_function: GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IDA] [PMID 2821168]; GO_function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO_function: GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IMP] [PMID 7498764]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]; GO_function: GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IMP] [PMID 3528755]; GO_function: GO:0004738 - pyruvate dehydrogenase activity [Evidence IMP] [PMID 3528755]; GO_process: GO:0006103 - 2-oxoglutarate metabolic process [Evidence IMP] [PMID 3528755]; GO_process: GO:0006564 - L-serine biosynthetic process [Evidence IMP] [PMID 7498764]; GO_process: GO:0045454 - cell redox homeostasis [Evidence IEA]; GO_process: GO:0006546 - glycine catabolic process [Evidence IMP] [PMID 7498764]; GO_process: GO:0042743 - hydrogen peroxide metabolic process [Evidence IGI,IMP] [PMID 17110466]; GO_process: GO:0006550 - isoleucine cata…
codon start: 1
product: dihydrolipoyl dehydrogenase
translation: MKAKDDAVTGLTKGIEILFKQNKVDYFKGTGSFVNENEIEVEPLDGSEKVNLKAKNIIIATGSEPTPFPGIEVDEKKIVTSTGILSLTEVPKKLAIIGGGIIGLEMASVWSRLGSDVTVIEFLNNIGGAGIDGELAKLAQKTLKKQGINFKLGTKVLSGKVEGENVKIEVENAKNGKKEELDADVLLVAIGRRPYTEGLKIENVGVDMDQRGRVVIDQEYRTKYPHIRVIGDATFGPMLAHKAEEEGIAAVEYIKNGHGHVNYGAIPSVMYTHPEFAWVGQTEEQIKEAGIKYNVGKFPFLANSRAKTNLDTEGIVKIIADKETDRVLGVHIAGPNAGEMIAEAVLAIEYGASSEDIARTCHAHPTLSEAFKEAAMATYDKAIHF
SIO_010081: AWJ20_96
subclass of: SO_0000673
so part of: AWJ20_96
location: 315673..316830
location: region:315673-316830:1
so has part: feature:315673-316830:1:exon

XP_018734348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315673-316830:1:exon

AWJ20_97
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_97
so part of: sequence
location: complement(<315747..>316049)
location: region:315747-316049:-1
so has part: feature:315747-316049:-1:exon
subclass of: SO_0000010

30038060
type: Gene
SIO_000068: ncbigene

position:315747:-1
position: 315747
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:316049:-1
position: 316049
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315747-316049:-1:exon

AWJ20_97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_97
product: Multispecies: transposase
transcript id: XM_018882940.1
SIO_010081: AWJ20_97
subclass of: SO_0000673
so part of: AWJ20_97
location: complement(<315747..>316049)
location: region:315747-316049:-1
so has part: feature:315747-316049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315747-316049:-1:exon

AWJ20_97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_97
codon start: 1
product: transposase
translation: MLFKNSITVTSDPRRDQTEAISRPIIPPPIMANFLGTSVNERIPVEVTIFFSSTSIPGKGVGSEPVAIMMFLAFKLTFSEPSRGSTSISFSLTKLPVPLK
SIO_010081: AWJ20_97
subclass of: SO_0000673
so part of: AWJ20_97
location: complement(315747..316049)
location: region:315747-316049:-1
so has part: feature:315747-316049:-1:exon

XP_018734349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315747-316049:-1:exon

AWJ20_98
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RAD51
locus tag: AWJ20_98
so part of: sequence
location: complement(<317652..>318515)
location: region:317652-318515:-1
so has part: feature:317652-318515:-1:exon
subclass of: SO_0000010

30038071
type: Gene
SIO_000068: ncbigene

position:317652:-1
position: 317652
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:318515:-1
position: 318515
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317652-318515:-1:exon

AWJ20_98
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RAD51
locus tag: AWJ20_98
product: recombinase RAD51
transcript id: XM_018882951.1
SIO_010081: AWJ20_98
subclass of: SO_0000673
so part of: AWJ20_98
location: complement(<317652..>318515)
location: region:317652-318515:-1
so has part: feature:317652-318515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317652-318515:-1:exon

AWJ20_98
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RAD51
locus tag: AWJ20_98
inference: similar to AA sequence:KEGG_Orthology:K04482
note: Strand exchange protein; forms a helical filament with DNA that searches for homology; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; homolog of Dmc1p and bacterial RecA protein; GO_component: GO:0005694 - chromosome [Evidence IEA,IEA]; GO_component: GO:0000794 - condensed nuclear chromosome [Evidence IDA] [PMID 9427283]; GO_component: GO:0000228 - nuclear chromosome [Evidence IDA] [PMID 11459983]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO_function: GO:0008094 - DNA-dependent ATPase activity [Evidence IDA] [PMID 8066464]; GO_function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA,IEA]; GO_function: GO:0000150 - recombinase activity [Evidence IDA] [PMID 8066464]; GO_function: GO:0003697 - single-stranded DNA binding [Evidence IDA] [PMID 20371520]; GO_process: GO:0006200 - ATP catabolic process [Evidence IEA]; GO_process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO_process: GO:0006310 - DNA recombination [Evidence IEA]; GO_process: GO:0006310 - DNA recombination [Evidence IDA] [PMID 22955832]; GO_process: GO:0006281 - DNA repair [Evidence IEA,IEA]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0045002 - double-strand break repair via single-strand annealing [Evidence IMP] [PMID 8849880]; GO_process: GO:0030491 - heteroduplex formation [Evidence IDA] [PMID 10506208]; GO_process: GO:0000709 - meiotic joint molecule formation [Evidence IMP] [PMID 1581961]; GO_process: GO:0007131 - reciprocal meiotic recombination [Evidence IMP] [PMID 16581767]; GO_process: GO:0042148 - strand invasion [Evidence IDA] [PMID 8066464]; GO_…
codon start: 1
product: recombinase RAD51
translation: MLTEVKGFSDTKVDKLLTEAAKYVPMGFTTATEFHSRRSELISITTGSKQLDTLLGGGIETGSVTEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPQRLLSIGERFGLSGTDALDNVAYARAYNADHQFELLNQAAAMMVQTRFAVLIVDSIMALYRTDYSGRGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDGMSNPYNPDPKKPIGGNIIAHASTTRLSFKKAKGENRRCTIYDSPCLPESTVEFAICEDGIRDPRDDKNND
SIO_010081: AWJ20_98
subclass of: SO_0000673
so part of: AWJ20_98
location: complement(317652..318515)
location: region:317652-318515:-1
so has part: feature:317652-318515:-1:exon

XP_018734350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317652-318515:-1:exon

AWJ20_99
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CTS1
locus tag: AWJ20_99
so part of: sequence
location: <326344..>328092
location: region:326344-328092:1
so has part: feature:326344-328092:1:exon
subclass of: SO_0000010

30038082
type: Gene
SIO_000068: ncbigene

position:326344:1
position: 326344
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:328092:1
position: 328092
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326344-328092:1:exon

AWJ20_99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CTS1
locus tag: AWJ20_99
product: Cts1p
transcript id: XM_018882962.1
SIO_010081: AWJ20_99
subclass of: SO_0000673
so part of: AWJ20_99
location: <326344..>328092
location: region:326344-328092:1
so has part: feature:326344-328092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326344-328092:1:exon

AWJ20_99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CTS1
locus tag: AWJ20_99
inference: similar to AA sequence:KEGG_Orthology:K01183
note: Endochitinase; required for cell separation after mitosis; transcriptional activation during the G1 phase of the cell cycle is mediated by transcription factor Ace2p; GO_component: GO:0005618 - cell wall [Evidence IEA,IEA]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 11747810]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 11914276]; GO_component: GO:0005576 - extracellular region [Evidence IEA,IEA]; GO_component: GO:0005576 - extracellular region [Evidence IDA] [PMID 19129178]; GO_component: GO:0005576 - extracellular region [Evidence IDA] [PMID 1918080]; GO_component: GO:0009277 - fungal-type cell wall [Evidence IDA] [PMID 11747810]; GO_component: GO:0009277 - fungal-type cell wall [Evidence IDA] [PMID 1918080]; GO_component: GO:0005635 - nuclear envelope [Evidence IDA] [PMID 11914276]; GO_function: GO:0008061 - chitin binding [Evidence IEA]; GO_function: GO:0004568 - chitinase activity [Evidence IEA,IEA]; GO_function: GO:0008843 - endochitinase activity [Evidence IDA] [PMID 6799506]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA,IEA]; GO_process: GO:0006032 - chitin catabolic process [Evidence IEA,IEA]; GO_process: GO:0006032 - chitin catabolic process [Evidence IC] [PMID 3033651]; GO_process: GO:0007109 - cytokinesis, completion of separation [Evidence IMP] [PMID 1918080]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0000272 - polysaccharide catabolic process [Evidence IEA]
codon start: 1
product: Cts1p
translation: MLSLKLIASSLALLGNVVSAVDVSTNTNVALYWGQNSAGGANTQQSLATYCQDASTDIVILSFLNTFFGPGNLPEVNFGPSCGGPNFPGSSLESCPNIGQDIQTCQSLGKTVLLSLGGAIGDYGFTSDSQAADFADTLWNTFGGGSSDTRPFGDAVVDGFDLDIENGDSTGYVAFINELRKDYATDSSKTYYISGAPVCPLSGNDLSSAITGADFDFIFVQFYDNTCGMQAWAPNDANSAFNFDAWNTFITTEADNTNAKIYLGVPGGPTAANSGYEPADTVIQAAQYLQKNYPSFGGVMIWDASQAFNNVNDGVNFAQAVKAGLLEEDVVSSTTSASSTAVSTVASLAAETGVIAVAVTSGFHNSSSSSSSAATAAPATVTAYATSEAVVQETVVETITSCTGSNVVSCHYVTKTYVTASTSTPSVLYETKVVTYTSNGEVVITTTVCPLTETTAAVPASTASGSSAAAAVLTSVAGAAAPAVTSAPAAGPASETGESVTTSIIYDTELLTVTVSGQVEETTAVVAVPAPVATSNGTFASNSSAVAPAIEPSVPFAESTGAASAVTVSVFGFLAAGIAMLL
SIO_010081: AWJ20_99
subclass of: SO_0000673
so part of: AWJ20_99
location: 326344..328092
location: region:326344-328092:1
so has part: feature:326344-328092:1:exon

XP_018734351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326344-328092:1:exon

AWJ20_100
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SEC7
locus tag: AWJ20_100
so part of: sequence
location: <330231..>332741
location: region:330231-332741:1
so has part: feature:330231-332741:1:exon
subclass of: SO_0000010

30032754
type: Gene
SIO_000068: ncbigene

position:330231:1
position: 330231
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:332741:1
position: 332741
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330231-332741:1:exon

AWJ20_100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SEC7
locus tag: AWJ20_100
product: Arf family guanine nucleotide exchange factor SEC7
transcript id: XM_018877847.1
SIO_010081: AWJ20_100
subclass of: SO_0000673
so part of: AWJ20_100
location: <330231..>332741
location: region:330231-332741:1
so has part: feature:330231-332741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330231-332741:1:exon

AWJ20_100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SEC7
locus tag: AWJ20_100
inference: similar to AA sequence:KEGG_Orthology:K18442
codon start: 1
product: Arf family guanine nucleotide exchange factor SEC7
translation: MTPVNNESNEPNESSEPTEPSVQSGSKVNEDPLISDSKTTLAAANISNVEGTESSAVYQKAEHPTTATDDADAEGVTPEPYSTNSTATDLTGPSDHKMSPSSSLSSIHAEGGTSASKSSGSPAGPQTPVQSINKEIIEGDDDKSTDSSPSVAKSLYQHTATFVNEDEYASWLGSDGETQQAVRVEYMSLFDFKSKSILSALRILCDKLYMKGESQQLNRVIEAFSQSWVSQNPKHGFYDANVVYTITYALVLLNTDLYAADHSTTKKMSRSVFIQNTLETVRAQRGPLPNSPNLSRRSEDFSSRRISVVSSNHDTLMVQDANVEPLSKEWEFQLEMVLKSFYSSVSKEALQLHIIEHAPFSPLSRIYSPTGHDHTPSILSASQAQNSGASSIFGRMNFGRLRGSKNLEPHQSRIALNDRAAEGFRHDSLASSYSLETSVTNNFGFSRHAVGFAGLLWNSMIKEEDSGAQSTGDDDDFADFSKIEKELADETELELLGAPWAKEGILMYRPYVDPSTGKKPRKKDWTKVFMVVQRGQLKMFKFDMSSSSHGAVNGAVGGGNWMENAQLVDGFHLCHTMAQELPPPKKSNGFAAVWSLTLPQRGLLVFQAGTPEVAREFVYTCNFWAGRLSKEPFDDPVSNMEYGWTAALDSSSGKSGSALMTTPSTATLRRPGSSAGHRVLPGDRLTIKEWKPTGHNMVVSDLNEEKQLKTLQEYIKRAENDLTEHNALVSKLAQAYTPSTTNWSKAHTNWENKSQFLLQQVIRYKIYVEVLDKAIKDRLEKFPVKSETDGDAQDDLTVSDGGLPVKDPSLAVFDKGSPNGEKFSSVTVEAHQVIAA
SIO_010081: AWJ20_100
subclass of: SO_0000673
so part of: AWJ20_100
location: 330231..332741
location: region:330231-332741:1
so has part: feature:330231-332741:1:exon

XP_018734352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330231-332741:1:exon

AWJ20_101
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PUP3
locus tag: AWJ20_101
so part of: sequence
location: <333438..>334013
location: region:333438-334013:1
so has part: feature:333438-334013:1:exon
subclass of: SO_0000010

30032765
type: Gene
SIO_000068: ncbigene

position:333438:1
position: 333438
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:334013:1
position: 334013
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333438-334013:1:exon

AWJ20_101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PUP3
locus tag: AWJ20_101
product: proteasome core particle subunit beta 3
transcript id: XM_018877858.1
SIO_010081: AWJ20_101
subclass of: SO_0000673
so part of: AWJ20_101
location: <333438..>334013
location: region:333438-334013:1
so has part: feature:333438-334013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333438-334013:1:exon

AWJ20_101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PUP3
locus tag: AWJ20_101
inference: similar to AA sequence:KEGG_Orthology:K02735
note: Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IC] [PMID 9087403]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IC] [PMID 9087403]; GO_component: GO:0000502 - proteasome complex [Evidence IEA]; GO_component: GO:0005839 - proteasome core complex [Evidence IEA]; GO_component: GO:0019774 - proteasome core complex, beta-subunit complex [Evidence IDA] [PMID 9087403]; GO_component: GO:0034515 - proteasome storage granule [Evidence IC] [PMID 9087403]; GO_function: GO:0061133 - endopeptidase activator activity [Evidence IGI] [PMID 9207060]; GO_function: GO:0004175 - endopeptidase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA,IEA]; GO_process: GO:0010499 - proteasomal ubiquitin-independent protein catabolic process [Evidence IDA] [PMID 19162040]; GO_process: GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process [Evidence IDA] [PMID 11545745]; GO_process: GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process [Evidence IDA] [PMID 19029916]; GO_process: GO:0006508 - proteolysis [Evidence IEA]; GO_process: GO:0051603 - proteolysis involved in cellular protein catabolic process [Evidence IEA]
codon start: 1
product: proteasome core particle subunit beta 3
translation: MAGKDCIAIACDLRLGMQSVGVSSNFEKIFEYDSVYLGLTGLATDVITLSEEFRMKHNMYKMREERRMEPDTFANLVSSSLYEKRFGPYFVGPIVAGLNSKTGKPFICGFDLIGAIDFAKDFIVAGTATDQLYGMCESLWEPDLEPEDLFETISQALLNAQDRDALSGWGAVVYIITKDKVVKRLLKTRQD
SIO_010081: AWJ20_101
subclass of: SO_0000673
so part of: AWJ20_101
location: 333438..334013
location: region:333438-334013:1
so has part: feature:333438-334013:1:exon

XP_018734353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333438-334013:1:exon

AWJ20_102
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_102
so part of: sequence
location: <334906..>336996
location: region:334906-336996:1
so has part: feature:334906-336996:1:exon
subclass of: SO_0000010

30032776
type: Gene
SIO_000068: ncbigene

position:334906:1
position: 334906
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:336996:1
position: 336996
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334906-336996:1:exon

AWJ20_102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_102
product: hypothetical protein
transcript id: XM_018877869.1
SIO_010081: AWJ20_102
subclass of: SO_0000673
so part of: AWJ20_102
location: <334906..>336996
location: region:334906-336996:1
so has part: feature:334906-336996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:334906-336996:1:exon

AWJ20_102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_102
codon start: 1
product: hypothetical protein
translation: MKPIRLATTKELHDASTIPSITVEKTNPSEMLSHSKKEVVPMASRATPTTRTISKISASHANKITESLPKSHKRAISHIISILSQTSLLECQTISFERYKREIEPHLFQVRYSQHDFDLVLSLYQCGHGEIAYKLQTILAAQWPYSADVKATIVTSLGLLVSQGKPEYAESFLNLLIEKFDEEQYEMFSRSLRLTVSDSDKDDPNVRKIGGLSVDKKSPPIPDSGDSQDIFSTLKNPRRFKYFVANALVKFALELGDPLLAASLLIQFRSDFVYIQTNSIYNCIRGLLVYDPYLNPFLIRAIYNIYCAYPNDRVLFDSEMKRKLTMNGIRYCKNKYPSFANECFNLAVKLKGDPVPIVAVYKMIMLNLQYNNVTQASNIWKAFSSSLGEFDNHDRLTISALLLRLSKDKKYLPVSVAIASSLQPSYYNLEGITEGLLLTCARSKNVELIEKIYPHLEQPFRRSTLTALLKLHLVLDDSSGVEKLLLEINSRKKTGSSTHHNGGLNEVELSSIIEELSNHDTSRAETFLERFSTWPSKLLLRSYAAISNRAIEKKEWATYQKYLDLLLDHDDSRDLSDVCCIENIQLKAECSKLSESTSSFHSVQRLHQSLTGPRRKFYKTRERLVGLHIICDTALKLQTRATSIIQWLVLEYLNLGLAHNDIRQHLQMRHGFRILPPDIQQKWLSSLEPHDQQTNL
SIO_010081: AWJ20_102
subclass of: SO_0000673
so part of: AWJ20_102
location: 334906..336996
location: region:334906-336996:1
so has part: feature:334906-336996:1:exon

XP_018734354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334906-336996:1:exon

AWJ20_103
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TSC11
locus tag: AWJ20_103
so part of: sequence
location: <339086..>343338
location: region:339086-343338:1
so has part: feature:339086-343338:1:exon
subclass of: SO_0000010

30032787
type: Gene
SIO_000068: ncbigene

position:339086:1
position: 339086
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:343338:1
position: 343338
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339086-343338:1:exon

AWJ20_103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TSC11
locus tag: AWJ20_103
product: Tsc11p
transcript id: XM_018877878.1
SIO_010081: AWJ20_103
subclass of: SO_0000673
so part of: AWJ20_103
location: join(<339086..339241,339436..>343338)
location: region:339086-343338:1
so has part: feature:339086-339241:1:exon
so has part: feature:339436-343338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339086-339241:1:exon

position:339241:1
position: 339241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339436-343338:1:exon

position:339436:1
position: 339436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AWJ20_103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TSC11
locus tag: AWJ20_103
note: Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p); TORC2 is a membrane-associated complex that regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; involved in sphingolipid metabolism; contains a RasGEFN domain; GO_component: GO:0031932 - TORC2 complex [Evidence IEA]; GO_component: GO:0031932 - TORC2 complex [Evidence IPI] [PMID 12408816]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005774 - vacuolar membrane [Evidence IEA]; GO_component: GO:0005773 - vacuole [Evidence IEA]; GO_function: GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IPI] [PMID 12631735]; GO_process: GO:0031929 - TOR signaling [Evidence IEA]; GO_process: GO:0031929 - TOR signaling [Evidence IC] [PMID 12408816]; GO_process: GO:0030950 - establishment or maintenance of actin cytoskeleton polarity [Evidence IPI] [PMID 12408816]; GO_process: GO:0030950 - establishment or maintenance of actin cytoskeleton polarity [Evidence IMP] [PMID 15809876]; GO_process: GO:0031505 - fungal-type cell wall organization [Evidence IGI,IMP] [PMID 15809876]; GO_process: GO:0043087 - regulation of GTPase activity [Evidence IEA]; GO_process: GO:0001558 - regulation of cell growth [Evidence IPI] [PMID 12408816]; GO_process: GO:0030148 - sphingolipid biosynthetic process [Evidence IGI] [PMID 9804843]
codon start: 1
product: Tsc11p
translation: MSRVPDSRNEIIGLPHHRSGDDQRNNGSRIDDILAKLEIEEKIKEGAENLLEVFDKRKIKGGDKEEIKKQVESQLDAANAKIQLLQQQLGDLGVGGQVTRDGRRSLETRRSIDDLRPLTRTGASRSTSDINGYGNGNGTSGIGRSDTEIAIPEGIEIGPGSDRSGYRENGRGISASASSTGTKKDSILGVNGDLESEDHADADEDLRSGQESPTWSLEAILHSLDPSQPSEFLVQRSNDLVELLQRHPVLKYDLVMSRVGDKIRVLLLHKKPEVIASGYRLARNAITDMSSIRDIRSLHIDFMIVRTMTKDSKSQLERLQAVRLVRSFLDVPGGVDEISIGVIRALVAVSEQSDDKLRYIAIETLGEIFIKNPEKVSASGGIRVLLQSIIEGPYELSGSLSMAFAYVLDSPKNRGFLRGGRDLEYLISAMTESQVRGHVNLERLQNGAKVISSLLRTWSGLFATCIDNFYCLKSLVLCLEVPIPSLRDVLLDIFLSILCIKPLSWSSSFLAGRRLTTFGRIPDLEKELANGGKSFQSSFSQSSGGGGTFAAGDYSSRYIDHYSALLLSILVECNLIESLVQLLRSNDDVANTRKATLLLGEILSMTSRVSPPATLRRIGALPGLLESAMDHKSAFSSASSAAVFQIDKISRNLHKGRQSTITGRTGPVSEVPSLLSSKRKAVRVKMGVQIDDASFKQLIMETQVLNTKTFVKWNWDALSELIQGPLLNPKRLDEAIKTTKFMKRLMSFYRPFKYRFSAIKRTKPNQKYIDVGKSLLLTLLYNPEGVRYLTENKLLRQIAECLAQLDPMSGITSAEPLFSRQRLENTLSHGYFMLLGTLSSDPNGLAMMERWRMFNMFYHLSEIPDREDLIISFIASMDYNLVGHPRIILSKALRTGQLEVRLFATGYLQNLMGTESETQKWAIELLATQLYDPSIEVCKLAVQILENFCSINENLEHFVKMKPSFDHLGDIGTPLLLRFLSTSRGFQYLKELDYVHNEMDNWVHGQNDAFVLQIEEYLENANNLWIHDKFGLSSTATATGLLARDDGTGVGENKPPRHFFGELTITEEGCHLLQSKGHFDVFAEYIDQHKFEEEDGEILTKLKGCMWAVAHIGSNPRGVPFLEESGVVENMIKIFESSQLYSLRGTAFFCLGLVSLTYEGVEILDEMGWACVRDIMDEPCGICIPKSLQSSFDESSKVVTDAPVTTYQSPSSSSESLDTTVKESLPQTSETIKNEKTSNSTSQDDETEFPMVYSDPIKRRIITALSNLSNQILANDASKQLVRLEAKYGSRFQSIDLFLDTMKLLETYHYKLPVRRFIFELFDTTTLMERMARKQKEQQRRARHLSDTTKRE
SIO_010081: AWJ20_103
subclass of: SO_0000673
so part of: AWJ20_103
location: join(339086..339241,339436..343338)
location: region:339086-343338:1
so has part: feature:339086-339241:1:exon
so has part: feature:339436-343338:1:exon

XP_018734355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339086-339241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339436-343338:1:exon

AWJ20_104
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NMD3
locus tag: AWJ20_104
so part of: sequence
location: <343924..>345444
location: region:343924-345444:1
so has part: feature:343924-345444:1:exon
subclass of: SO_0000010

30032798
type: Gene
SIO_000068: ncbigene

position:343924:1
position: 343924
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:345444:1
position: 345444
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343924-345444:1:exon

AWJ20_104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NMD3
locus tag: AWJ20_104
product: ribosome-binding protein NMD3
transcript id: XM_018877889.1
SIO_010081: AWJ20_104
subclass of: SO_0000673
so part of: AWJ20_104
location: <343924..>345444
location: region:343924-345444:1
so has part: feature:343924-345444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343924-345444:1:exon

AWJ20_104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NMD3
locus tag: AWJ20_104
inference: similar to AA sequence:KEGG_Orthology:K07562
note: Protein involved in nuclear export of the large ribosomal subunit; acts as a Crm1p-dependent adapter protein for export of nascent ribosomal subunits through the nuclear pore complex; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 10022925]; GO_component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IDA] [PMID 10022925]; GO_component: GO:0005654 - nucleoplasm [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 23212245]; GO_function: GO:0043023 - ribosomal large subunit binding [Evidence IDA] [PMID 11105761]; GO_function: GO:0043023 - ribosomal large subunit binding [Evidence IDA] [PMID 17347149]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0000055 - ribosomal large subunit export from nucleus [Evidence IMP] [PMID 11086007]; GO_process: GO:0000055 - ribosomal large subunit export from nucleus [Evidence IGI] [PMID 23212245]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: ribosome-binding protein NMD3
translation: MKAEGGLAMCNDCISLSVDITEGIQKEAVITFCKNCERLQVPPTHWIFAPRESRELLGACLKRLRGLNKVRLIDAKYVWTEPHSRRTKIKVLVQGEAPQFPGVLIQQGITVNFTETSAQCPDCAKSYTATTWRANIQVRQKVDHKKTFFYLEQLILKNHAHKYTVSIQENKEGLDFFYNQRNHALKMLEFLSGVIPVRVTKSSELISQNIHTSAKSYKFSYSVEIVPICKEDLVVLPKKLAKSLGISNQLTLCYRIGNAVHLIDPTNLQTAELAAGIYWRSPFSSLSTGKNLTEYVVLDIEPVGPANGKFALADVTVARSVDLGSNDTTYYVRTHLGGILHPGDTVMGYHLSNTNFNHALWDEIDQDKTPEVILVKKSYPDKIRSKTRNWKVKRMAKEYNDDTVRATGREKTKNKSNDAFERAQRDYEEFLRELEEDPELRTEVNLYKNVPEVDAQEENGEEGEDDDESEELPGVNLDELKLEDDLSSDLSFSDDNSDEPDDENDS
SIO_010081: AWJ20_104
subclass of: SO_0000673
so part of: AWJ20_104
location: 343924..345444
location: region:343924-345444:1
so has part: feature:343924-345444:1:exon

XP_018734356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343924-345444:1:exon

AWJ20_105
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MPP10
locus tag: AWJ20_105
so part of: sequence
location: <345783..>347639
location: region:345783-347639:1
so has part: feature:345783-347639:1:exon
subclass of: SO_0000010

30032809
type: Gene
SIO_000068: ncbigene

position:345783:1
position: 345783
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:347639:1
position: 347639
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345783-347639:1:exon

AWJ20_105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MPP10
locus tag: AWJ20_105
product: Mpp10p
transcript id: XM_018877900.1
SIO_010081: AWJ20_105
subclass of: SO_0000673
so part of: AWJ20_105
location: <345783..>347639
location: region:345783-347639:1
so has part: feature:345783-347639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345783-347639:1:exon

AWJ20_105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MPP10
locus tag: AWJ20_105
inference: similar to AA sequence:KEGG_Orthology:K14559
note: Component of the SSU processome and 90S preribosome; required for pre-18S rRNA processing, interacts with and controls the stability of Imp3p and Imp4p, essential for viability; similar to human Mpp10p; GO_component: GO:0030686 - 90S preribosome [Evidence IDA] [PMID 12150911]; GO_component: GO:0034457 - Mpp10 complex [Evidence IDA] [PMID 17515605]; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 11914276]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 11914276]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA,IEA]; GO_component: GO:0032040 - small-subunit processome [Evidence IDA] [PMID 12068309]; GO_component: GO:0032040 - small-subunit processome [Evidence IMP] [PMID 12242301]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 9315638]; GO_process: GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 9315638]; GO_process: GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 9315638]; GO_process: GO:0006364 - rRNA processing [Evidence IEA,IEA]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]
codon start: 1
product: Mpp10p
translation: MSAGLVELLNRSPQNLLVPSDDLKAAAFKAVKESLDPIASDYSIFDQLHTEGLDAEQIWAQARMVVDGAIEKLLGDVMSRKRKREDDGMSDEELDSELDEDIEQSGDEESDEGFADIRERQDLEDDEDSDLDVKELDGYEEVDEDEEEEEDDDEQTLVGEDGFSGDEDGSEEENEEDKDENVLSKPKSELDEGLFRLADFQQQILALEKDDQEDEEEDINYFADAKDQDSESDADMQYDDFFAPAPKILTGSADQEEDEEDEESDYDEDEEFTGLDTEAGSKDIDSAMKNARRELFADDDEEEEEGGPSTEKLSTFEKQQLEIMKQIKQLEEENVAEKSWAVRGEVKAKDRPLDSLIETDLDFERNAKPVPVITQEVTESLEDMIRRRIKNEQFDDIPRRLPDTLPEFQKAKLVEVQETKSQKSLAELYEDDYVKEHNPDSYKDAESEQLKGAHKEIEDMYTSLSRKLDALCSWNYTPKAPKAAISIVSNVAAISMEEAQPLAMATESMLAPQEVYQPGATSKREVVGANGLPVAKAEMSREERKREKRHQKAKRAKHFKEKEAKENSKAQKEGSKSNIMDTLKKGNVTVIGKKGEKRDLSGKLVKEKGKVESANLKL
SIO_010081: AWJ20_105
subclass of: SO_0000673
so part of: AWJ20_105
location: 345783..347639
location: region:345783-347639:1
so has part: feature:345783-347639:1:exon

XP_018734357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345783-347639:1:exon

AWJ20_106
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_106
so part of: sequence
location: complement(<347803..>349416)
location: region:347803-349416:-1
so has part: feature:347803-349416:-1:exon
subclass of: SO_0000010

30032820
type: Gene
SIO_000068: ncbigene

position:347803:-1
position: 347803
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:349416:-1
position: 349416
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347803-349416:-1:exon

AWJ20_106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_106
product: hypothetical protein
transcript id: XM_018877911.1
SIO_010081: AWJ20_106
subclass of: SO_0000673
so part of: AWJ20_106
location: complement(<347803..>349416)
location: region:347803-349416:-1
so has part: feature:347803-349416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347803-349416:-1:exon

AWJ20_106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_106
codon start: 1
product: hypothetical protein
translation: MSRRQPIAKDNHIGTGYGLDKNRLQARDYRDRTKPQGLGTRPRSRSVSPARKSEPPPYRRERPQNNKASNSFSRETGFKEADLERKWRNDEDNFILKQMKDGSIIRIKDNRAKPIDWFVVCLKYLEPNESSHSDLVDSLLGLNSRQPVENPYDLENLDIKYSDVHEFEFPEPTSVISSLSENELEQLKVQCEEFAKLDENKRNFEFWQSTIVLCTERLWEMGQKVKSRDSRVVEVVSSDIDNLIIGKSATELADLEKRVDTMLQSANISIDRDFWLQISKRLKVDKARAQLLSAYIDSINIRTVLVDKVRERELSRNSAESRELVAKLDALKDHLIKARKDPVQYPELLKRIASVTSDNQISMSKSTHQSAHSPIYPTALDESEFDIPKANEAHFNDEVESNANPELVKPKYYNRVILGYEWNKYNKAHYTSEHPPPKVVQGYKFNIFYPKLTGSATIPSYKIIPDKTKSTSDGASHAGSDTVILLFQSPAPYQNIAFRIVDQPWDRSSHGNSLYKSQFENGVLQLHFKFKKTYYKT
SIO_010081: AWJ20_106
subclass of: SO_0000673
so part of: AWJ20_106
location: complement(347803..349416)
location: region:347803-349416:-1
so has part: feature:347803-349416:-1:exon

XP_018734358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347803-349416:-1:exon

AWJ20_107
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PDX1
locus tag: AWJ20_107
so part of: sequence
location: <350257..>351528
location: region:350257-351528:1
so has part: feature:350257-351528:1:exon
subclass of: SO_0000010

30032831
type: Gene
SIO_000068: ncbigene

position:350257:1
position: 350257
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:351528:1
position: 351528
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350257-351528:1:exon

AWJ20_107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PDX1
locus tag: AWJ20_107
product: Pdx1p
transcript id: XM_018877920.1
SIO_010081: AWJ20_107
subclass of: SO_0000673
so part of: AWJ20_107
location: <350257..>351528
location: region:350257-351528:1
so has part: feature:350257-351528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350257-351528:1:exon

AWJ20_107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PDX1
locus tag: AWJ20_107
note: E3-binding protein of the mitochondrial pyruvate dehydrogenase complex; plays a structural role in the complex by binding and positioning Dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide acetyltransferase (E2) core; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0005967 - mitochondrial pyruvate dehydrogenase complex [Evidence IDA] [PMID 2007123]; GO_component: GO:0005967 - mitochondrial pyruvate dehydrogenase complex [Evidence IDA,IPI] [PMID 7947791]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0005198 - structural molecule activity [Evidence IDA,IMP] [PMID 2007123]; GO_function: GO:0016746 - transferase activity, transferring acyl groups [Evidence IEA]; GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IDA,IMP] [PMID 2007123]; GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IDA] [PMID 7947791]; GO_process: GO:0008152 - metabolic process [Evidence IEA]
codon start: 1
product: Pdx1p
translation: MVSFLARRLVTRANLRVGHRAISSSRNLLAASNFGMPAMSPTMTEGGIVEWKFKEGESFSAGDVLLEIETDKAQIDVEAQDDGVLAKIYAEAGEKGIPVGKPIAVIAEPGDDLASLKLPSTEQSEGATETPAAEQSQEESKPTASETSSSSSHASTSSPSSGASANKKQTLLPSVAGILRAKGISSEEALEKIQASGPNGRILKGDALAYIGSISNESVDAISDNIKKLQKLDLSHKLQEPKAKSESSDSEKAPEKAAASPVSSQAAPEPVSAIFSLSDVNLLKSTLDATLSTSISVQNLVEKAIKLALRDTPKLTRARKSILNDPIFDDIVSISPRGSKAFDYKVSYPTSSARSSSASVDIYDILTSSRKPLRSPTARIASTELLKISVTPNSKVSGSDKKAQVFLDRVGYYLAQGKGDLVL
SIO_010081: AWJ20_107
subclass of: SO_0000673
so part of: AWJ20_107
location: 350257..351528
location: region:350257-351528:1
so has part: feature:350257-351528:1:exon

XP_018734359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350257-351528:1:exon

AWJ20_108
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_108
so part of: sequence
location: complement(<351670..>352785)
location: region:351670-352785:-1
so has part: feature:351670-352785:-1:exon
subclass of: SO_0000010

30032842
type: Gene
SIO_000068: ncbigene

position:351670:-1
position: 351670
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:352785:-1
position: 352785
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351670-352785:-1:exon

AWJ20_108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_108
product: hypothetical protein
transcript id: XM_018877931.1
SIO_010081: AWJ20_108
subclass of: SO_0000673
so part of: AWJ20_108
location: complement(<351670..>352785)
location: region:351670-352785:-1
so has part: feature:351670-352785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351670-352785:-1:exon

AWJ20_108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_108
codon start: 1
product: hypothetical protein
translation: MFSSFRTGFSLPLRGTIRVPQPRSFCSLKQDLASRQKNLLPKTFKRNNTQLPKNVNDKNNLTSNDWKSRVPQFPFGKEVAPTLIPKANTPRVTKDFTFRQLVMSLKNAREPELLYTAESHRLYFLTSVALTFVVSYNLFDLVDRSVKSLIEEYKENPEDLSQRDNQIKAVKRGSLIALMASIYATAAFVFATFPTRLVRRIEYLPGNKEYLRLVTHPWFPGKPSPVLTIPLENLSIGKRSKVWTGSGFYGTAHRSSFFFFIFEKDKWFPWIVDRSGWFWGDGRVYDVILGKESIELAEKGLSYDDILRIQQNEASKRKTELRRELGPAWRAKAMGQLMKEDAVKLQGAAKRALNSSVSNHKQLPGEDQEKK
SIO_010081: AWJ20_108
subclass of: SO_0000673
so part of: AWJ20_108
location: complement(351670..352785)
location: region:351670-352785:-1
so has part: feature:351670-352785:-1:exon

XP_018734360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351670-352785:-1:exon

AWJ20_109
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_109
so part of: sequence
location: <353688..>355778
location: region:353688-355778:1
so has part: feature:353688-355778:1:exon
subclass of: SO_0000010

30032853
type: Gene
SIO_000068: ncbigene

position:353688:1
position: 353688
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:355778:1
position: 355778
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353688-355778:1:exon

AWJ20_109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_109
product: hypothetical protein
transcript id: XM_018877942.1
SIO_010081: AWJ20_109
subclass of: SO_0000673
so part of: AWJ20_109
location: <353688..>355778
location: region:353688-355778:1
so has part: feature:353688-355778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353688-355778:1:exon

AWJ20_109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_109
inference: similar to AA sequence:KEGG_Orthology:K03380
codon start: 1
product: hypothetical protein
translation: MPTHIVKESKVDVLIIGAGPAGHMAATWFARTGVNARIIDKRSASQFVGQADGLQSRTLEIFQSFGFADRAIKESNHMLEICFWQPGEDASKGIERSGRIPDSTIGLSRFQQAVIHQGRVEGWMRDSWRKWSDNSLVLERPVQATELVIDTSIPASDIESYPVTVTVEHLKDEQAVAEQFGSKVSNGLFRQFGGDGDKNAKGETEIIHAKYVVGTDGAHSWVRRNLGISMVGESTDYIWGVLDGIPVTDFPDIRCRCAIHSAEHGSIMVIPREHNMIRLYIQLQKTPQASDSSSGRIDRSKITPELILENANKILFPYTIDMVDIKWFTAYQIGQRVATEFQKNGRVFLAGDATHTHSPKAGQGMNISMADTYNLAWKIAHIVKGVADPAILDTYESERKTIAQNLIDFDAKLSKLFSGRPAVPGIETPGVDLAEFHKVFEKGNEFASGTTVDYDGSILIDKATNELTETKRRYDEDNITTNPLATNCPIGRRLDTAQVVVQSDSKPVELADVCLSDGRWRVLYFAGDIKSNASLKNFMVKFGEYLEASDNFVKKYTPATASLYSVIDILLVHASSRTACEWNDFPSAFRPRDHKGRMDYLKIYADDTSYHQGHGHAYKKYGIDTSFGALLVVRPDGYLAKVEPLNQDGINSIEEFFAKFMIPQKVSLSNHEPIILEREEKEWYGSESYARRIFLE
SIO_010081: AWJ20_109
subclass of: SO_0000673
so part of: AWJ20_109
location: 353688..355778
location: region:353688-355778:1
so has part: feature:353688-355778:1:exon

XP_018734361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353688-355778:1:exon

AWJ20_110
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_110
so part of: sequence
location: complement(<356023..>356096)
location: region:356023-356096:-1
so has part: feature:356023-356096:-1:exon
subclass of: SO_0000663

30032865
type: Gene
SIO_000068: ncbigene

position:356023:-1
position: 356023
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:356096:-1
position: 356096
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356023-356096:-1:exon

AWJ20_110
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_110
product: tRNA-Asn
SIO_010081: AWJ20_110
subclass of: SO_0000673
so part of: AWJ20_110
location: complement(<356023..>356096)
location: region:356023-356096:-1
so has part: feature:356023-356096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:356023-356096:-1:exon

AWJ20_111
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_111
so part of: sequence
location: complement(<356310..>358163)
location: region:356310-358163:-1
so has part: feature:356310-358163:-1:exon
subclass of: SO_0000010

30032876
type: Gene
SIO_000068: ncbigene

position:356310:-1
position: 356310
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:358163:-1
position: 358163
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356310-358163:-1:exon

AWJ20_111
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_111
product: hypothetical protein
transcript id: XM_018877964.1
SIO_010081: AWJ20_111
subclass of: SO_0000673
so part of: AWJ20_111
location: complement(<356310..>358163)
location: region:356310-358163:-1
so has part: feature:356310-358163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:356310-358163:-1:exon

AWJ20_111
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_111
inference: similar to AA sequence:KEGG_Orthology:K12373
codon start: 1
product: hypothetical protein
translation: MKLSLLNSLSIALYAFGTASAVTVNPLPAPRQINWGNTGPKQVAQYLTLSNNGPYNQILHDAFSRCMDNMNLKWTPAATEAPIPSFAPFPTGIPTVADSGSGPVTGAIPNAKRSQVQMNSPMIIGVKLQINDYNADLQYGVDESYNITITQSSQMIEISAVTVWGALNAFKTLQQIIIGGPSNTLIIEQPVTIVDAPLYPHRGIMVDTGRNFVSSKKVLEQIDIMSLSKMNVLHWHLDDSQSWPIQLNTYPQMVRDAYSPSEQFSHSDVANIIAYAKARGVRVIPEVDMPGHADAGWKQVDPNAVACSNSWWSNDVWEFHTAVEPNPGQLDIMYEGTYEIVENVYKELSDMFSDNWFHVGADELQTGCYNFSALTQEYLADGHTYNELLEYWVNRTYPIFSAPKDRRVVMWEDVVLSTPQASNVPTNVVMQSWNNGTGNVKLLAQMGYDVIVSSSDFLYLDCGYGGWVTNDDRYNIQANPDPSGATDSFNYGGNGGSWCAPYKTWQRIYEFDITYGLTDEEATHVIGAEAPLWSEQVDDNVVTIKFWPRAAALAELVWSGNKDANGQNRATEMTQRILNFREWLVALGYSVTPLVPRYCSLHPHACDLNYNQSAVSP
SIO_010081: AWJ20_111
subclass of: SO_0000673
so part of: AWJ20_111
location: complement(356310..358163)
location: region:356310-358163:-1
so has part: feature:356310-358163:-1:exon

XP_018734362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356310-358163:-1:exon

AWJ20_112
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_112
so part of: sequence
location: <360509..>360611
location: region:360509-360611:1
so has part: feature:360509-360611:1:exon
subclass of: SO_0000663

30032887
type: Gene
SIO_000068: ncbigene

position:360509:1
position: 360509
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:360611:1
position: 360611
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360509-360611:1:exon

AWJ20_112
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_112
product: tRNA-Val
SIO_010081: AWJ20_112
subclass of: SO_0000673
so part of: AWJ20_112
location: <360509..>360611
location: region:360509-360611:1
so has part: feature:360509-360611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360509-360611:1:exon

AWJ20_113
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_113
so part of: sequence
location: complement(<360954..>362033)
location: region:360954-362033:-1
so has part: feature:360954-362033:-1:exon
subclass of: SO_0000010

30032898
type: Gene
SIO_000068: ncbigene

position:360954:-1
position: 360954
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:362033:-1
position: 362033
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360954-362033:-1:exon

AWJ20_113
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_113
product: hypothetical protein
transcript id: XM_018877981.1
SIO_010081: AWJ20_113
subclass of: SO_0000673
so part of: AWJ20_113
location: complement(<360954..>362033)
location: region:360954-362033:-1
so has part: feature:360954-362033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360954-362033:-1:exon

AWJ20_113
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_113
codon start: 1
product: hypothetical protein
translation: MSTLRVRRQNEPHSFRTSKSRRNQHQNSGAIHFQNAATSSSVGGIVGTNGPNQSRTIANFHNSTYHPPANGLTTRGTSRFCISNEYAGIGQWGYGMWRQQSTDIYNIERDEEYRENYLKSIREFGYNYLKPSGIRQTMRSLLERAVQGDEDLDISRGHIDISGMADPNEREELELQQEQLEVRGVENEENDRARNVAEEDTTNDVGNERMANMRHAIDGEEDDTFRSDQDEDENEEEVDLDADIPDLDAEIPEAVDNSYDDSYDEDEYQEGFMADEEYGDVVTENDVQDADNSASMIMPSDQSAIGPAIALPDEDSFVRPVHPNQDIAHADVSYSSNAGYGLDDGDSELEMDVSNMSFQ
SIO_010081: AWJ20_113
subclass of: SO_0000673
so part of: AWJ20_113
location: complement(360954..362033)
location: region:360954-362033:-1
so has part: feature:360954-362033:-1:exon

XP_018734363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360954-362033:-1:exon

AWJ20_114
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: COX10
locus tag: AWJ20_114
so part of: sequence
location: complement(<362363..>363877)
location: region:362363-363877:-1
so has part: feature:362363-363877:-1:exon
subclass of: SO_0000010

30032909
type: Gene
SIO_000068: ncbigene

position:362363:-1
position: 362363
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:363877:-1
position: 363877
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362363-363877:-1:exon

AWJ20_114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: COX10
locus tag: AWJ20_114
product: Cox10p
transcript id: XM_018877990.1
SIO_010081: AWJ20_114
subclass of: SO_0000673
so part of: AWJ20_114
location: complement(<362363..>363877)
location: region:362363-363877:-1
so has part: feature:362363-363877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362363-363877:-1:exon

AWJ20_114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: COX10
locus tag: AWJ20_114
inference: similar to AA sequence:KEGG_Orthology:K02257
note: Heme A:farnesyltransferase; catalyzes the first step in the conversion of protoheme to the heme A prosthetic group required for cytochrome c oxidase activity; human ortholog is associated with mitochondrial disorders; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0031966 - mitochondrial membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0004659 - prenyltransferase activity [Evidence IEA]; GO_function: GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]; GO_function: GO:0008495 - protoheme IX farnesyltransferase activity [Evidence ISS] [PMID 8118433]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0048034 - heme O biosynthetic process [Evidence IEA]; GO_process: GO:0006784 - heme a biosynthetic process [Evidence IMP] [PMID 8118433]; GO_process: GO:0006783 - heme biosynthetic process [Evidence IEA,IEA]
codon start: 1
product: Cox10p
translation: MLYRCQSYEKNELIRALSHFSSAARSTTTSKLCRHFSSSRNLLIRSAAARSSSDVLRQDTFFSNIYLSQGHSRNSSSKSASVSSILYPKSDLDLGSVPSSPVNTSESDPSNASSGRAKATVYSSSTRSAIFSRSGSDSNNKTSDELRTASKENSTATDTIPIIPFEVRQLDHSSPRRSKPVTEIPFYAPYLALTKPRLSALVVLSAMSSYALTPYDATLSQLLFLTIGTALSSGSANAINMAREYEYDAQMTRTRTRPVVRGLLSPGQAFGFAGLSGTLGVASLYFGVNPTVAALGAANIVLYGWTYTSLKRKSIINTWVGAVVGAIPPLMGWAASSSLTDPGAWALAGLLYAWQFPHFNSLSHNIREEYRRAGYVMAAWTNPSLNARVALKYSVAMFPLCIALSYYNVTDWFYAIDSGILNGWLTYLAFKFWTEQRHIVGPVIEAASSSSAGGSSSYARKLFWGSVLHLPGVLVLAMIHKKGQWDWLWPQEEEEEEDIDADEE
SIO_010081: AWJ20_114
subclass of: SO_0000673
so part of: AWJ20_114
location: complement(362363..363877)
location: region:362363-363877:-1
so has part: feature:362363-363877:-1:exon

XP_018734364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362363-363877:-1:exon

AWJ20_115
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_115
so part of: sequence
location: complement(<364750..>365847)
location: region:364750-365847:-1
so has part: feature:364750-365847:-1:exon
subclass of: SO_0000010

30032920
type: Gene
SIO_000068: ncbigene

position:364750:-1
position: 364750
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:365847:-1
position: 365847
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364750-365847:-1:exon

AWJ20_115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_115
product: hypothetical protein
transcript id: XM_018878001.1
SIO_010081: AWJ20_115
subclass of: SO_0000673
so part of: AWJ20_115
location: complement(<364750..>365847)
location: region:364750-365847:-1
so has part: feature:364750-365847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364750-365847:-1:exon

AWJ20_115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_115
inference: similar to AA sequence:KEGG_Orthology:K00252
codon start: 1
product: hypothetical protein
translation: MRTQLASALQTRHISNARPALSKAKFDWENPLRLDTLLTEDEIAISQVAHEYCQEKLYPRVLEGYRTEIFDKTLMREMGELGLLGATIDGYGCSGVSSVAYGLIAREVEKVDSGYRSAMSVQSSLVMHPIDVFGTQEQKDRFLPKLATGELIGCFGLTEPNHGSDPASMETTARPHPTKKGVYLLNGAKNWITNSPIADIAIIWAKLNGEIRGFIVERDNVGNGSFATPAIKNKTALRASITGMVQMDDVEVPEENLFPDIKGLKGPFTCLNSARYGISWGAIGALEEALKLARNYALERKQFNKPLASFQLVQKKLAEALTDAAYGLTNCVQVGRLKDQGLATPEMISMIKRRNCDVALKNART
SIO_010081: AWJ20_115
subclass of: SO_0000673
so part of: AWJ20_115
location: complement(364750..365847)
location: region:364750-365847:-1
so has part: feature:364750-365847:-1:exon

XP_018734365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364750-365847:-1:exon

AWJ20_116
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: INP53
locus tag: AWJ20_116
so part of: sequence
location: complement(<367099..>368109)
location: region:367099-368109:-1
so has part: feature:367099-368109:-1:exon
subclass of: SO_0000010

30032931
type: Gene
SIO_000068: ncbigene

position:367099:-1
position: 367099
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:368109:-1
position: 368109
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367099-368109:-1:exon

AWJ20_116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: INP53
locus tag: AWJ20_116
product: phosphatidylinositol-3-/phosphoinositide 5-phosphatase INP53
transcript id: XM_018878012.1
SIO_010081: AWJ20_116
subclass of: SO_0000673
so part of: AWJ20_116
location: complement(<367099..>368109)
location: region:367099-368109:-1
so has part: feature:367099-368109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367099-368109:-1:exon

AWJ20_116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: INP53
locus tag: AWJ20_116
inference: similar to AA sequence:KEGG_Orthology:K01106
note: Polyphosphatidylinositol phosphatase; dephosphorylates multiple phosphatidylinositol phosphates; involved in trans Golgi network-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches; contains Sac1 and 5-ptase domains; INP53 has a paralog, INP52, that arose from the whole genome duplication; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 11094088]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11094088]; GO_component: GO:0016020 - membrane [Evidence IDA] [PMID 9560389]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0043813 - phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity [Evidence IDA] [PMID 10224048]; GO_function: GO:0004438 - phosphatidylinositol-3-phosphatase activity [Evidence IDA] [PMID 10224048]; GO_function: GO:0004439 - phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [Evidence IEA]; GO_function: GO:0004439 - phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [Evidence IDA] [PMID 10224048]; GO_function: GO:0004439 - phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [Evidence IMP] [PMID 9438131]; GO_function: GO:0043812 - phosphatidylinositol-4-phosphate phosphatase activity [Evidence IDA] [PMID 10224048]; GO_function: GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]; GO_process: GO:0006897 - endocytosis [Evidence IEA]; GO_process: GO:0046856 - phosphatidylinositol dephosphorylation [Evidence IEA]; GO_process: GO:0046856 - phosphatidylinositol dephosphorylation [Evidence IDA] [PMID 10224048]; GO_process: GO:0046856 - phosphatidylinositol dephosphorylation [Evidence IMP] [PMID 9438131]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: phosphatidylinositol-3-/phosphoinositide 5-phosphatase INP53
translation: MAMAINQGQAEILVFGFQELVELDNTSVTAKSMFHSKRKKEKEGAVVTSSHISHQYKAWQDKLDEFVGSNLSERYRLVHSNNMVGLFTCVFMKESECNRVRDIKSSAIKTGLGGLHGNKGGLAVRMVVDDSSLCFVNCHLAAGQSGVLQRNSDIETILETKFSDASDNTNFTSKGIFVNGGDGTKIMDHEICFFFGDMNYRINRHRQVAIKAIEENAFDQLLEYDQLGLQLKKNPGLRLRAFSEKPITFAPTYKFDVGSDRYDSSDKKRVPAWCDRIFYRGGLKVVPASYYSFSVRASDHRPVTGVYSVQLKTIDPGKRKEVYKDSLLRWKEYLAV
SIO_010081: AWJ20_116
subclass of: SO_0000673
so part of: AWJ20_116
location: complement(367099..368109)
location: region:367099-368109:-1
so has part: feature:367099-368109:-1:exon

XP_018734366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367099-368109:-1:exon

AWJ20_117
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_117
so part of: sequence
location: complement(<368189..>371158)
location: region:368189-371158:-1
so has part: feature:368189-371158:-1:exon
subclass of: SO_0000010

30032942
type: Gene
SIO_000068: ncbigene

position:368189:-1
position: 368189
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:371158:-1
position: 371158
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368189-371158:-1:exon

AWJ20_117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_117
product: inositol polyphosphate phosphatase (predicted)
transcript id: XM_018878023.1
SIO_010081: AWJ20_117
subclass of: SO_0000673
so part of: AWJ20_117
location: complement(<368189..>371158)
location: region:368189-371158:-1
so has part: feature:368189-371158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368189-371158:-1:exon

AWJ20_117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_117
codon start: 1
product: inositol polyphosphate phosphatase (predicted)
translation: MADHSSLPSVNNVKARFEQMAAAEADLAPGRSLKYSLSMPVGSSSARNDAGNIKADAADARSKSVSVVPDNSIQAAAVAAPLPKKLPPGAPPKPARLSSQHKRISSVGVSQSASQSASQPAVLAAAQSGVGLGLVSAPGVPATPSAPSAATPDPSAATEEIQQNTVNRQQSQHARTPSSLLMPPPASTSRTREGSVTPPIPPPPRIRTPVDFEKSPSQNMTRSPIRTPPTPPLPRSRTPIENLSLAPHSHGHGPAFGLRSPSQPSINTPPMLPPRPSAHHSIAGIETSSQNLPSISHSPASPVAPTTPISGISVSSTPVPPPVPPVPPHSIKQVASHQHSSLHHLDNPSHPVSQPVPETNNSSHAAAGVSATVPPTTPYSHINNSLQQFHINGGNDPSASYPNIALQQTNFTPPILPPRPVRSVSPQTALGQSPSLSESFSATTTLHPPALSVATTPSTPAMNPSLPPANLFPPPPQTQITQHLPTPIVPAASAVPTPSTAPAPTSTPISDSDNETELYSNPNTSNTSLAAGSEYAYYSFPDSSQASRRPPIFEGVLHSIQLSSKKEEGKKTISTFGKHACVSGGSTTCIYDTQTGGQIWSLSHSEVRITSIGYKSDDGHTFWLGTKDGQIWEISLTDIPGTIPNKRANTHLNSIILIYKNEQTNEMWTLSEDGKLCVWSECDLFKTPKTFRVTPNFKAVGVAGSTLWVGRNRQIFVYQPSSQANVPFLLTARPIQASAPVTPAAGGLQPSPSSASLSSMNGYKPPPANGTTASSNSNNLIGDFTCAANVGSIPDHMFFGHDNGCISVYSVSQLAFIDAVSVSMNKISSMCGVGDNLWIGLKTGTILVCDAKTTPWTVRKEWKAHDTAVASIACFDDLDISQVEGMLPVISTSLAETSVALWDGLLKHDWIGKFTGPLASGGWGSAPDPGCAPLRGAAGTVDERNDSSAARGAAGSGAEPQPPEAESPLRSTNRSRNGFTGARSRVQCS
SIO_010081: AWJ20_117
subclass of: SO_0000673
so part of: AWJ20_117
location: complement(368189..371158)
location: region:368189-371158:-1
so has part: feature:368189-371158:-1:exon

XP_018734367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368189-371158:-1:exon

AWJ20_118
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SSO2
locus tag: AWJ20_118
so part of: sequence
location: complement(<372419..>373186)
location: region:372419-373186:-1
so has part: feature:372419-373186:-1:exon
subclass of: SO_0000010

30032953
type: Gene
SIO_000068: ncbigene

position:372419:-1
position: 372419
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:373186:-1
position: 373186
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372419-373186:-1:exon

AWJ20_118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SSO2
locus tag: AWJ20_118
product: Sso2p
transcript id: XM_018878034.1
SIO_010081: AWJ20_118
subclass of: SO_0000673
so part of: AWJ20_118
location: complement(<372419..>373186)
location: region:372419-373186:-1
so has part: feature:372419-373186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372419-373186:-1:exon

AWJ20_118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SSO2
locus tag: AWJ20_118
inference: similar to AA sequence:KEGG_Orthology:K08486
note: Plasma membrane t-SNARE; involved in fusion of secretory vesicles at the plasma membrane; syntaxin homolog that is functionally redundant with Sso1p; SSO2 has a paralog, SSO1, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 11914276]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 16622836]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 17507646]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 19502581]; GO_component: GO:0005628 - prospore membrane [Evidence IDA] [PMID 19502581]; GO_function: GO:0005484 - SNAP receptor activity [Evidence IEA]; GO_function: GO:0005484 - SNAP receptor activity [Evidence IPI] [PMID 7954793]; GO_function: GO:0070300 - phosphatidic acid binding [Evidence IDA] [PMID 19502581]; GO_process: GO:0006893 - Golgi to plasma membrane transport [Evidence TAS] [PMID 10047442]; GO_process: GO:0031321 - ascospore-type prospore assembly [Evidence IGI] [PMID 19502581]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0006906 - vesicle fusion [Evidence TAS] [PMID 10047442]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]
codon start: 1
product: Sso2p
translation: MIAFFGELDDIKRNLVQYDDNVDRIEALHKRSLAEVGGEHEDYIQGQIESLTQDTQALADTLKARIKTLQAKSTRDSTKKTQAENVKRQFLSSIQKYQTTEARFRQKYREAAERQFRIVRPDATDAEVKEAIEDSAGVQIFSQALMNSNRRGQARTALTEVQTRHREIQKIEQTMAELAQLFRDMEVLVAEQEEPIRHIDEQAATVQTDIEQGVSHTQKAIFSARAARKKKWWCLGIVLIIVIILAVVLGVKLSN
SIO_010081: AWJ20_118
subclass of: SO_0000673
so part of: AWJ20_118
location: complement(372419..373186)
location: region:372419-373186:-1
so has part: feature:372419-373186:-1:exon

XP_018734368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372419-373186:-1:exon

AWJ20_119
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PGI1
locus tag: AWJ20_119
so part of: sequence
location: <381201..>382856
location: region:381201-382856:1
so has part: feature:381201-382856:1:exon
subclass of: SO_0000010

30032964
type: Gene
SIO_000068: ncbigene

position:381201:1
position: 381201
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:382856:1
position: 382856
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381201-382856:1:exon

AWJ20_119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PGI1
locus tag: AWJ20_119
product: glucose-6-phosphate isomerase
transcript id: XM_018878045.1
SIO_010081: AWJ20_119
subclass of: SO_0000673
so part of: AWJ20_119
location: <381201..>382856
location: region:381201-382856:1
so has part: feature:381201-382856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381201-382856:1:exon

AWJ20_119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PGI1
locus tag: AWJ20_119
inference: similar to AA sequence:KEGG_Orthology:K01810
note: Glycolytic enzyme phosphoglucose isomerase; catalyzes the interconversion of glucose-6-phosphate and fructose-6-phosphate; required for cell cycle progression and completion of the gluconeogenic events of sporulation; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16962558]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 16622836]; GO_function: GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA,IEA]; GO_function: GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IMP] [PMID 3007940]; GO_function: GO:0016853 - isomerase activity [Evidence IEA]; GO_process: GO:0006094 - gluconeogenesis [Evidence IEA,IEA]; GO_process: GO:0006094 - gluconeogenesis [Evidence IMP] [PMID 3020369]; GO_process: GO:0006096 - glycolytic process [Evidence IEA,IEA,IEA]; GO_process: GO:0006096 - glycolytic process [Evidence IMP] [PMID 3007940]; GO_process: GO:0006098 - pentose-phosphate shunt [Evidence IMP] [PMID 7901008]
codon start: 1
product: glucose-6-phosphate isomerase
translation: MASATFSQASDLPAWKTLQNLYDTEGKSLSVKEQFSKDPERFSKFSHTFTNFDGSKILFDFSKNIINDEILASLIKLAKEANVEGLREAFFKGDKINFTEDRAVYHIALRNQAGKPMLVDGKDVTPEVNSVLAHIKEFTEQVRSGEWKGYTGKAITDIVNIGIGGSDLGPVMVTEALKSYSKRDLDVHFVSNIDGTHIAEILRKVNPETTLFLIASKTFTTAETTTNANSAKKWFLETAKDKTHIARHFVALSTNAEEVSKFGIDTANMFGFENWVGGRYSVWSSIGLSVALYIGYDNFVQFLKGAEALDKHFTETPLEQNIPVLGGLLSVWYNNFFGAQTHLVAPFDQYLHRFPAYLQQLSMESNGKSVTRSNEFVKYSTGSILFGEPATNSQHSFFQLVHQGTKLIPTDFILAAKSHNPIENNLHQRMLASNFFAQAEALMVGKPQEVVKAEGAPDSLVPHKIFLGNRPTTSILAQEITPAALGALIAYYEHLTFTEGAVWNINSFDQWGVELGKVLAKAIGKELDNNEPVTDHDASTNALINQFKKWA
SIO_010081: AWJ20_119
subclass of: SO_0000673
so part of: AWJ20_119
location: 381201..382856
location: region:381201-382856:1
so has part: feature:381201-382856:1:exon

XP_018734369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381201-382856:1:exon

AWJ20_120
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_120
so part of: sequence
location: <384229..>384924
location: region:384229-384924:1
so has part: feature:384229-384924:1:exon
subclass of: SO_0000010

30032976
type: Gene
SIO_000068: ncbigene

position:384229:1
position: 384229
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:384924:1
position: 384924
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384229-384924:1:exon

AWJ20_120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_120
product: hypothetical protein
transcript id: XM_018878057.1
SIO_010081: AWJ20_120
subclass of: SO_0000673
so part of: AWJ20_120
location: <384229..>384924
location: region:384229-384924:1
so has part: feature:384229-384924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384229-384924:1:exon

AWJ20_120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_120
codon start: 1
product: hypothetical protein
translation: MINSVLPKQILSNDITLNVLPDSHPHIPAVVGRVPYATTVKLLQFLVTTLLIPPSSKLMILSARTDSHPSIFRYSYYRAHDTAKEPQKDEQHSRPTTTDPDQEAGHHGHHHHRLTQSQAVKSRLSSGLPPRFIVYWRTVSPEDYEMKTRTSSSSKDEDTTEYFPYSWSSSLTKEVDALKIARSLGILPHEYPVLTGIFEFDFDDTCTSIITHTITDLEYLTKPTSECVNPA
SIO_010081: AWJ20_120
subclass of: SO_0000673
so part of: AWJ20_120
location: 384229..384924
location: region:384229-384924:1
so has part: feature:384229-384924:1:exon

XP_018734370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384229-384924:1:exon

AWJ20_121
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: KSP1
locus tag: AWJ20_121
so part of: sequence
location: complement(<385276..>387441)
location: region:385276-387441:-1
so has part: feature:385276-387441:-1:exon
subclass of: SO_0000010

30032987
type: Gene
SIO_000068: ncbigene

position:385276:-1
position: 385276
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:387441:-1
position: 387441
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385276-387441:-1:exon

AWJ20_121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: KSP1
locus tag: AWJ20_121
product: putative serine/threonine protein kinase KSP1
transcript id: XM_018878068.1
SIO_010081: AWJ20_121
subclass of: SO_0000673
so part of: AWJ20_121
location: complement(<385276..>387441)
location: region:385276-387441:-1
so has part: feature:385276-387441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385276-387441:-1:exon

AWJ20_121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: KSP1
locus tag: AWJ20_121
codon start: 1
product: putative serine/threonine protein kinase KSP1
translation: MPAITEKPPTQSQTSASPSKSLLNGRYQIIADINKGSYGVVSLAKDIGGDGSLVAIKCITKSSNCAVYEEALYEVEMHKRLGNHPNIVQLIDFFDENSKAYLVLEYCAPGDLYEAIKAGRGPREQNCVLDFMLQLIDSVEYCHSKGVYHRDIKPENILIGNDGSVKLADWGLATCTKINGEFGIGSERYMAPELFDQANTKEYDAEKADIWALGICLLNILFGRNPFTVASQKDKLFLDFATAREALFDIFPSLSEDVFAALRHCLTMDPDNRSLSKLRKELLAVRMWTTDEYYEDEDVYDDDEFGLNLNDNEINEYEQQSNNEKTTKNNDDFEDNDDTVVGGFVKASSGALATVHGGSISAANGEHEPFATKTPGPHHAPSPLAIFQESLAVPQDFISTTTNRQPFRTPTGLVNHSPLRQDLDWNRTMQFTPPTRENGFFPNSKVKTPSNLSFVLSARGGNGSGFPMQSVGEDDESGLLESSTSSASRSRRGSDGSTNSIIDDEHHEDVFAMDGELSGSFNKLSLNSGHNNSNIINGGARAVPTSNERAGSGSDSSISSVPSLVKSTTLEEASLPSQRFTFNGASASFTPSNMTIPKMIVQGASPERRKTAFLASSAPPVRDFLNLGKSWSDIDFEDDDDADFVEDDFYYNKLRNAVPAGTGTVTSVSGSNSQRLDDAMASKETSAVSIKPMATKSRLPAIAGKSHPTPGQSWVYPHWVE
SIO_010081: AWJ20_121
subclass of: SO_0000673
so part of: AWJ20_121
location: complement(385276..387441)
location: region:385276-387441:-1
so has part: feature:385276-387441:-1:exon

XP_018734371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385276-387441:-1:exon

AWJ20_122
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_122
so part of: sequence
location: <392838..>393656
location: region:392838-393656:1
so has part: feature:392838-393656:1:exon
subclass of: SO_0000010

30032998
type: Gene
SIO_000068: ncbigene

position:392838:1
position: 392838
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:393656:1
position: 393656
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392838-393656:1:exon

AWJ20_122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_122
product: hypothetical protein
transcript id: XM_018878079.1
SIO_010081: AWJ20_122
subclass of: SO_0000673
so part of: AWJ20_122
location: <392838..>393656
location: region:392838-393656:1
so has part: feature:392838-393656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392838-393656:1:exon

AWJ20_122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_122
codon start: 1
product: hypothetical protein
translation: MPCPIVILSKVIGTVSLGVLAGASTTNSLVSLPSILTNSSLQTEVDVQQQDTILTSLYQTTVSKVILPLSTVAFGSLVSAYILAPRSGQHPYLIYSALSVPIVAGLNYFYGPGISFNTLLNNFCGSLSVGKCDRTSSTKPSQETGSPAVASGADLTETKSASSTSAVSKSSEDTSSSDEPSLLDNSVYAHLDHPDKGGSDIELSSASSNIATPEDQSEDELAGQPVSSTTTAGTNYPASALSSNLSKLSFYSSIVFQLAFLISTIGIYGDLS
SIO_010081: AWJ20_122
subclass of: SO_0000673
so part of: AWJ20_122
location: 392838..393656
location: region:392838-393656:1
so has part: feature:392838-393656:1:exon

XP_018734372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392838-393656:1:exon

AWJ20_123
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_123
so part of: sequence
location: <395872..>398796
location: region:395872-398796:1
so has part: feature:395872-398796:1:exon
subclass of: SO_0000010

30033009
type: Gene
SIO_000068: ncbigene

position:395872:1
position: 395872
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:398796:1
position: 398796
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395872-398796:1:exon

AWJ20_123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_123
product: hypothetical protein
transcript id: XM_018878090.1
SIO_010081: AWJ20_123
subclass of: SO_0000673
so part of: AWJ20_123
location: <395872..>398796
location: region:395872-398796:1
so has part: feature:395872-398796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395872-398796:1:exon

AWJ20_123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_123
codon start: 1
product: hypothetical protein
translation: MGNLQVSSGQYVQAAKSFASAVIFGLGGSVENDGRHLGVGTLNDLKSNSPINRRAISSIPDLVHAIDQSLRGSPVSANACSSHSPLLLSPQQALQARYKLFPPDGQLPLVSQCQNNQNTNPQIPVDSLPSNYIQRYNNMGREDDPRQTSASIEAIVSNALLNLSKIFQDGINSGAPDKVVYLNGRVPSTYDILSLYLLSLSLNASASTANNVGILLLASVTQSPMSSNLPCQNCERRTRDLALDYYLFGLSLDQKHPHLHTNLGSLLREQGKLNEAVQMYQKAIQCDPHFNIALANLAGCLKDQGQIDKAIIYYARAVQENPDFVEALVGLASCYGSVCNWTDRGGCGWEQMSVDIEGNLVSGQIEGWVTRVIKVAENQVDEVRRWGIGAIDFIDSVEGGNLFKTIERTVRISDPNERVKFRQLINSWRGCYEEGTNLLSLIEKTIRAVQRQWYLDRRQGVKPPVPDYTYARPHIPSVLPIPLAPSILPFHSFTLPLNSFYVRQISEKAASRVSMTVLSQNWLPKHVYPPPASPKNGVLKVAYISSDFANHPLAHLMQNVFGMHDRTKVHAYCYATSPSDSSQYRQEIEKGAYVFRDVSSWSTQKIVEQLVSDGIHISVNLNGFTKGGRNEIFATRPCPVQISLMGFAGPMGADWCDYVLGDITAMNGVPQYSNLSNNDSRLKLIQPPDENMSSYWPYRKEKVIYMPRTLFCCDHRQSAPDSNKVRIESGQPLHTWEADVELRQRLRKQLFPNLPEGAFLMGNFNQLYKIDPTIFVTWLRILQRLPHAYLWLLEFPKNGRTNLYTYAYKWTGSRDILSRIIFTPVAEKNEHIIRSRVCDLFLDTPECNAHTTAADVSWGGTPIITYPRHSYKLCSRIGASIVYGALPADYRGRQIGQRLVVHSEAEYEDRVVEFGSTLEGLRELNEIRTVLFNEREKDGNGLFNTKKWVESVEKGFQRAWEDWVQGKHENIFID
SIO_010081: AWJ20_123
subclass of: SO_0000673
so part of: AWJ20_123
location: 395872..398796
location: region:395872-398796:1
so has part: feature:395872-398796:1:exon

XP_018734373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395872-398796:1:exon

AWJ20_124
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ZAP1
locus tag: AWJ20_124
so part of: sequence
location: <401484..>404087
location: region:401484-404087:1
so has part: feature:401484-404087:1:exon
subclass of: SO_0000010

30033020
type: Gene
SIO_000068: ncbigene

position:401484:1
position: 401484
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:404087:1
position: 404087
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401484-404087:1:exon

AWJ20_124
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ZAP1
locus tag: AWJ20_124
product: Zap1p
transcript id: XM_018878101.1
SIO_010081: AWJ20_124
subclass of: SO_0000673
so part of: AWJ20_124
location: <401484..>404087
location: region:401484-404087:1
so has part: feature:401484-404087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401484-404087:1:exon

AWJ20_124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ZAP1
locus tag: AWJ20_124
note: Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 10899124]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding [Evidence IMP] [PMID 12549926]; GO_function: GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding [Evidence IDA,IMP] [PMID 9786867]; GO_function: GO:0046872 - metal ion binding [Evidence IEA,IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000981 - sequence-specific DNA binding RNA polymerase II transcription factor activity [Evidence IDA] [PMID 22128164]; GO_function: GO:0008270 - zinc ion binding [Evidence IDA] [PMID 14517251]; GO_function: GO:0008270 - zinc ion binding [Evidence IDA,IMP] [PMID 16720702]; GO_process: GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] [PMID 22128164]; GO_process: GO:0034225 - regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation [Evidence IMP] [PMID 9271382]; GO_process: GO:0034225 - regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation [Evidence IMP] [PMID 9786867]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Zap1p
translation: MLEAFVADDIYNWISPMMEKQAKNGAGNGPLARSASSPPTSVNGFGRPPARNVDREGSEPPHHFYPKLLESSTPLSEPETVDSETADSSSTTPNCVECEHESKPNLNSQHLSDRDLNKVDEANSVTKPNLKPDLTSTEQIPLSLQTAAASANVGTLPTEVQADGSCEECQVAMKDHLLQIYDPFLDYCAECQEAEEEHQLNNRDCAVAAQPDCEECIDVEHKPPPTDSNSMINFDILPSQKRISKKAFLENQIQPKYSNSRHEKMAMTVRTENMDLNMGINGGMNMGEGSLDPSLNIQTGNGLKRRASSFERSSEDHQRRKLESLSQLYNQQQNITRQYYLMLRQAQQQYNNSQGNKNQLDGTMPNKPLPSDLDQSHVQNNVGTSHSHIQHEHGHDHSHDHTHEHSHEHGNGHSCSHCHSSGNGHHDPQHQQVSPRSLYCHWNGHEGEAQFNSELALQAHLRHHIYPQAESMSDQLECQWDSCDVSLKFVDELLEHIRTDHYNNYSQPHTDCLYDGTHIHPKANDVTISQTSSQVYPSTQTQGYKCQWSNCQYIANTSDQLGVHVLSDHINNNIPKPSQMTTEPTREDMNNFMKNNDMFQCQYQACDFQSLNFDDFTSHIKSDHLSATAPLDSFATNDMVTHSLDPSLGIPQPNNIVGTTKPVNVTTTGTNNNTVKVKTEHDETTSTKTCKWVLENGQLCSCECKNTEELSNHIIEAHVGLRKTEYVCSWQGCDRNHRPFQQRQKMVRHLQVHTNHRPYKCHICNSTFGEESVLKQHLRVHSGERPFECKICHKRFAASAALSVHLRIHTGEKPLKCKYPGCEKRFSESSNLNKHLKTHFSGSPCICPICSESFQDPDHLFKHFKTH
SIO_010081: AWJ20_124
subclass of: SO_0000673
so part of: AWJ20_124
location: 401484..404087
location: region:401484-404087:1
so has part: feature:401484-404087:1:exon

XP_018734374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401484-404087:1:exon

AWJ20_125
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PEP8
locus tag: AWJ20_125
so part of: sequence
location: complement(<404377..>405324)
location: region:404377-405324:-1
so has part: feature:404377-405324:-1:exon
subclass of: SO_0000010

30033031
type: Gene
SIO_000068: ncbigene

position:404377:-1
position: 404377
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:405324:-1
position: 405324
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404377-405324:-1:exon

AWJ20_125
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PEP8
locus tag: AWJ20_125
product: retromer subunit PEP8
transcript id: XM_018878112.1
SIO_010081: AWJ20_125
subclass of: SO_0000673
so part of: AWJ20_125
location: complement(<404377..>405324)
location: region:404377-405324:-1
so has part: feature:404377-405324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404377-405324:-1:exon

AWJ20_125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PEP8
locus tag: AWJ20_125
inference: similar to AA sequence:KEGG_Orthology:K18466
note: Vacuolar protein component of the retromer; forms part of the multimeric membrane-associated retromer complex involved in vacuolar protein sorting along with Vps35p, Vps29p, Vps17p, and Vps5p; essential for endosome-to-Golgi retrograde protein transport; interacts with Ypt7p; protein abundance increases in response to DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0005768 - endosome [Evidence IPI] [PMID 9700157]; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IDA] [PMID 22842922]; GO_component: GO:0030904 - retromer complex [Evidence IEA]; GO_component: GO:0030904 - retromer complex [Evidence IMP,IPI] [PMID 9700157]; GO_component: GO:0030906 - retromer complex, inner shell [Evidence IMP] [PMID 9700157]; GO_function: GO:0008565 - protein transporter activity [Evidence IMP,IPI] [PMID 9700157]; GO_process: GO:0045053 - protein retention in Golgi apparatus [Evidence IMP] [PMID 8649377]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0042147 - retrograde transport, endosome to Golgi [Evidence IPI] [PMID 9700157]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0007034 - vacuolar transport [Evidence IEA]
codon start: 1
product: retromer subunit PEP8
translation: MASFFKSQLDIEIRLDGEDTRTHVEIKQSNGQKAIAGTGNPSSANALARRRSVPLYMDGESVKGSVTIRPRDGKRLEHMGIKVQFVGSIEQSSDRGQHDDFLSLAQELAAPAELRHPETYDFEFKNVEKQFESYNGINVKLRYYVKVTVFRRMADIVREKDLWVYNYKVPPEGISSIKMDVGIEDCLHIEFEYSKSRYHLKDVIVGRIYFLLVRLKIKHMELSIIRRETVGVAPNQYNESDTLVRFEIMDGAPVRGETIPIRLFLGGFDLTPTFRDVNKKFSIRTFLSLVLIDEDSRRYFKQSEIILYRNPQDET
SIO_010081: AWJ20_125
subclass of: SO_0000673
so part of: AWJ20_125
location: complement(404377..405324)
location: region:404377-405324:-1
so has part: feature:404377-405324:-1:exon

XP_018734375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404377-405324:-1:exon

AWJ20_126
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_126
so part of: sequence
location: complement(<405811..>407652)
location: region:405811-407652:-1
so has part: feature:405811-407652:-1:exon
subclass of: SO_0000010

30033042
type: Gene
SIO_000068: ncbigene

position:405811:-1
position: 405811
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:407652:-1
position: 407652
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405811-407652:-1:exon

AWJ20_126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_126
product: hypothetical protein
transcript id: XM_018878123.1
SIO_010081: AWJ20_126
subclass of: SO_0000673
so part of: AWJ20_126
location: complement(<405811..>407652)
location: region:405811-407652:-1
so has part: feature:405811-407652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405811-407652:-1:exon

AWJ20_126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_126
codon start: 1
product: hypothetical protein
translation: MSKAANRLNGSIGPPSRNGSESPVSLPPMLSPTLPAWAEEMIPQRMLSPTLPPEFDDLGSFRSDSTGSSDKKKPSSAATASDRPVILQPVPKRAVAPLISEGNGDHILSNGKDSTINGKKRRPSFIVTLKVDTKERERDRDRDGELSDKSNSESAKNREKVNDRRIGEKTDRSKDRTVTKDGEIRAKERPEKGVASTKLNEKSKRPPVKDGRDSEGELSSKKPSSTNPNSSSKKTIGLGIIEHKSSQNGSSTSNNANTNATTNNTKPSTKRPKINRSYSSSSEDEGPLAESAKRKKISKNQNQNQNQNHNSQTQLPSVKATKQKSEQKDSGAGLTNPASSPISKISSQSAISEEKREKYYRLLRSKMHNWIELAREKKHEADSAMEKKQYSLAAVISVDSLLAFIVGFDYEDRADQMVRRDANRSSWSTLIPFIGRLIINFEQNKIHQLVGLLYQIRALVHMRIASACHSVIQKKTKQLPDTGSSASRAGSGPGSGSDDVDVNKLNQEIVHLTTKYMACHDSSMQDFKLGLTQLSLDDVEKDYPKTWTNRHASPKPSSKHEGGYRPLEDPYYLPMHCFSTLQEAAAFGYKLTKEWADSNNIKCDSWALVKGLC
SIO_010081: AWJ20_126
subclass of: SO_0000673
so part of: AWJ20_126
location: complement(405811..407652)
location: region:405811-407652:-1
so has part: feature:405811-407652:-1:exon

XP_018734376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405811-407652:-1:exon

AWJ20_127
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_127
so part of: sequence
location: complement(<408233..>409825)
location: region:408233-409825:-1
so has part: feature:408233-409825:-1:exon
subclass of: SO_0000010

30033053
type: Gene
SIO_000068: ncbigene

position:408233:-1
position: 408233
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:409825:-1
position: 409825
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408233-409825:-1:exon

AWJ20_127
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_127
product: cystathionine gamma-synthase
transcript id: XM_018878134.1
SIO_010081: AWJ20_127
subclass of: SO_0000673
so part of: AWJ20_127
location: complement(<408233..>409825)
location: region:408233-409825:-1
so has part: feature:408233-409825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408233-409825:-1:exon

AWJ20_127
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_127
inference: similar to AA sequence:KEGG_Orthology:K01739
note: hypothetical protein with similarity to Str2p; Str2p is a cystathionine gamma-synthase important in sulfur metabolism; YLL058W is not an essential gene; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0003962 - cystathionine gamma-synthase activity [Evidence IEA]; GO_function: GO:0003962 - cystathionine gamma-synthase activity [Evidence ISS] [PMID 10821189]; GO_function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0009086 - methionine biosynthetic process [Evidence IEA]; GO_process: GO:0006790 - sulfur compound metabolic process [Evidence ISS] [PMID 10821189]
codon start: 1
product: cystathionine gamma-synthase
translation: MSVPDGIGDPIPPNEIHPVSFRLPTWRVVEGLMEDEPWVTSKLRTGYPRFSIHPKVQLLAADIISRFGDPGDKCLLFPFYDAAVRCKEFIERHSELPNVKVRVSGFTTTDKSDKKKQNDPSAPLATLTIFATFMPESEFAVGKLYLRVSGEAIGSRLGAYLCQCPRLEPTGSHTSSRELYATDSKSVLKKRIASLINDTASLSKVPTPKAVEEDVFLFPSGLTAIFNAHRAVLQAIGEYKSVCYGFAFTDTIKLLAKVGPGSHFYGNGEAEDLDSLTKLLESGERITALFCEVPTNPLLKTPDLLAIRKLADKYNFAVVVDDTLANYVNLNLFPYADIVCCSLTKIFNGACDALGGSLVLNPDSKYYNQLKQASTKFVDFLWYQDADVLEKNSRDVVERAYKSNTNSQAVVDLLNKSPVIDTVYYPSNSPTRKHYEELMVEKGGYGSLFSILFKDPINAQRFYDALDIDKGPSLGTNFTLCCPFPMLAHYSELDYVSTFGVDRNLIRVSIGLEPTADLVAKFDRALAACN
SIO_010081: AWJ20_127
subclass of: SO_0000673
so part of: AWJ20_127
location: complement(408233..409825)
location: region:408233-409825:-1
so has part: feature:408233-409825:-1:exon

XP_018734377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408233-409825:-1:exon

AWJ20_128
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_128
so part of: sequence
location: <410363..>411307
location: region:410363-411307:1
so has part: feature:410363-411307:1:exon
subclass of: SO_0000010

30033064
type: Gene
SIO_000068: ncbigene

position:410363:1
position: 410363
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:411307:1
position: 411307
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410363-411307:1:exon

AWJ20_128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_128
product: formamidase
transcript id: XM_018878145.1
SIO_010081: AWJ20_128
subclass of: SO_0000673
so part of: AWJ20_128
location: <410363..>411307
location: region:410363-411307:1
so has part: feature:410363-411307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410363-411307:1:exon

AWJ20_128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_128
codon start: 1
product: formamidase
translation: MTGELDQSFHVHSGQSHLKWSKDIKPVLRVKSGEVVTFDANDSSNNQIHKDSTLETLYFDLAICDPVYGPVYIEGAEPGDTLEVELMKLDPADWGWTAIFPDFGLLADEFPDTQLKIWKFAKGSKTAEFKKGIEVPIRPFLGEVGVAPPEGEHSTIPPLDTGGNIDCRHVVEGTKLYLPVKVAGALFSCGDGHAAQGDGEVCGTAIETPMTATLRFTVHKDKPWVTSPHYLTKPITTTVPDKGTYSILGIDSDLREAARKAIRSMIVYLTTTHSLTKVEAYMLCSVAVDLKIAEAVDMPNYAVAATLPLNIFTE
SIO_010081: AWJ20_128
subclass of: SO_0000673
so part of: AWJ20_128
location: 410363..411307
location: region:410363-411307:1
so has part: feature:410363-411307:1:exon

XP_018734378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410363-411307:1:exon

AWJ20_129
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_129
so part of: sequence
location: complement(<411573..>413339)
location: region:411573-413339:-1
so has part: feature:411573-413339:-1:exon
subclass of: SO_0000010

30033075
type: Gene
SIO_000068: ncbigene

position:411573:-1
position: 411573
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:413339:-1
position: 413339
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411573-413339:-1:exon

AWJ20_129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_129
product: hypothetical protein
transcript id: XM_018878156.1
SIO_010081: AWJ20_129
subclass of: SO_0000673
so part of: AWJ20_129
location: complement(<411573..>413339)
location: region:411573-413339:-1
so has part: feature:411573-413339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411573-413339:-1:exon

AWJ20_129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_129
codon start: 1
product: hypothetical protein
translation: MKVKSLHYIPMLPKADDKMIRKPAPLLTNNVLIRAMYNAVGKQPTADEIPDLRNSWAKIPANKQTVNLLGESLFWDTYLIMMASYGVEVVEALFQQRDAVVELCATPYYFGLVFDNSIIPSSPRWIVGAADNLLILALYLVSQISIHTQAIFKSQKYRLLLSCIIFGPFMLFEGWNFIQYESKRLELGLGLLFFTVGYPIISLIFVAFCFIIYSSAFLLVGGPSKMRTPFGSSEVGSATTLHDAIFKLCKAAVSDNGGHSFIKETMVIKAPSVTWVENPKNLNLLDSSMAILESTQASGISSSTSSSSSNSIYAQQHLGSKYISWLMRQPNYSTLSYIGSMLIFIIKLVKKIQLFLIYISQFLRRSARNSDKTSTRPDLQSGHVPFILEELEENESDEEEYNDHLDKNDAVDPETSDIDGWETESESESNDSAGPIDNGTFQEDFQELLLSGPDSLQTLLSAESPRRDILQKHLFNNSGRPLTRSQYTRLLENDRQESLKLIQNRWHDHNTSSLQNASDFDNDNEDGPDLPSSNLCVICISAPRQVVLFPCGCLLMCEPCRETLASQLFSGCVNCRRKVESYSHVVAE
SIO_010081: AWJ20_129
subclass of: SO_0000673
so part of: AWJ20_129
location: complement(411573..413339)
location: region:411573-413339:-1
so has part: feature:411573-413339:-1:exon

XP_018734379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411573-413339:-1:exon

AWJ20_130
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_130
so part of: sequence
location: complement(<414933..>416363)
location: region:414933-416363:-1
so has part: feature:414933-416363:-1:exon
subclass of: SO_0000010

30033087
type: Gene
SIO_000068: ncbigene

position:414933:-1
position: 414933
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:416363:-1
position: 416363
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414933-416363:-1:exon

AWJ20_130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_130
product: hypothetical protein
transcript id: XM_018878168.1
SIO_010081: AWJ20_130
subclass of: SO_0000673
so part of: AWJ20_130
location: complement(<414933..>416363)
location: region:414933-416363:-1
so has part: feature:414933-416363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414933-416363:-1:exon

AWJ20_130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_130
codon start: 1
product: hypothetical protein
translation: MSFPNFKYTPLAKEQTQLPSPTPHSPYISEAKVSFDNDLECPLQPGIQPVSRTPLWVSVKRFIKRFILFSLLSLLSLLTLTAVFNPSYTNPPDFKMLDEKVFITANIINGDLIRGRWGDSVVELIDLLGPQNVFLSIYGGPTDALKELEPRIKCDHSLVSEQDSPIHLESLPHIIVPGTNDTRVKRTEYLANVRNKALEPLNTLATKFDKILFMNDIIFNPHDAARLLFSTNVVDGKTDYRAACSVDFVNAFKFYDTFATRDFEGNSMGLPFFPWFANIGSAQSRRDVLNSKEAVRVRSCWGGMIAFEAKWFQSSNNNDNNDTSASDKVTTGTNRQLVRFRAEHEATWDASECCLINADLEAAAGANNGGIYMNPYVRVAYDEKNFKWLAFTRRFERLYSLIHDILNRMVSLPHKNPRYQEEPGQVIIESEYNFTQHQYQPRARVAGIGGYCGSRMLQVMKTHPKQGERMWESVKL
SIO_010081: AWJ20_130
subclass of: SO_0000673
so part of: AWJ20_130
location: complement(414933..416363)
location: region:414933-416363:-1
so has part: feature:414933-416363:-1:exon

XP_018734380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414933-416363:-1:exon

AWJ20_131
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MEP2
locus tag: AWJ20_131
so part of: sequence
location: <420374..>421774
location: region:420374-421774:1
so has part: feature:420374-421774:1:exon
subclass of: SO_0000010

30033098
type: Gene
SIO_000068: ncbigene

position:420374:1
position: 420374
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:421774:1
position: 421774
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420374-421774:1:exon

AWJ20_131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MEP2
locus tag: AWJ20_131
product: ammonium permease MEP2
transcript id: XM_018878179.1
SIO_010081: AWJ20_131
subclass of: SO_0000673
so part of: AWJ20_131
location: <420374..>421774
location: region:420374-421774:1
so has part: feature:420374-421774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420374-421774:1:exon

AWJ20_131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MEP2
locus tag: AWJ20_131
inference: similar to AA sequence:KEGG_Orthology:K03320
note: Ammonium permease involved in regulation of pseudohyphal growth; belongs to a ubiquitous family of cytoplasmic membrane proteins that transport only ammonium (NH4+); expression is under the nitrogen catabolite repression regulation; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 11069679]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 24124599]; GO_function: GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]; GO_function: GO:0008519 - ammonium transmembrane transporter activity [Evidence IDA,IMP] [PMID 9234685]; GO_process: GO:0072488 - ammonium transmembrane transport [Evidence IEA]; GO_process: GO:0015696 - ammonium transport [Evidence IEA,IEA]; GO_process: GO:0015696 - ammonium transport [Evidence IMP] [PMID 9234685]; GO_process: GO:0019740 - nitrogen utilization [Evidence IMP] [PMID 9234685]; GO_process: GO:0007124 - pseudohyphal growth [Evidence IMP] [PMID 9482721]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: ammonium permease MEP2
translation: MGNTGGDSLTEDINTQYNLANMVWIMTATALVWIMIPGVGLLYSGLSRKHHGLSLIWMALMAVSVVSLQWFFWGYSLAFSHEAGKFIGALDNFGMMNVLAAPSVGSTAIPDILYSFYQLVFAATTAMIMVGGAHERARLGPMMVMLFIWMTVVYCPIACWTWNPSGWLAKLGGLDFAGGGPVHMTSGAGALAYALVCGKRHDPLADDKVKTYRPHSVLSVVLGTVFLWFGWLGFNGGSSGNATIRGFYAANSTNLAAASGAMTWLMIDYFRKGRKWSVVAICTGAIAGLVGITPAAGFVPCWSAVPIGVITAAVCNFAFDLKKVLHIDDGLDVFALHGVGGLMGSILTGFFAADYIAALDGATQIPGGWLNHNYRQLGLQLAGATATLGYSFTVSTVILVALKYIPGFHLRLSVEEELLGTDVCQIGETYFQDSDEPVYTDGVSPGVMSGAQTPVPRTEKTADESV
SIO_010081: AWJ20_131
subclass of: SO_0000673
so part of: AWJ20_131
location: 420374..421774
location: region:420374-421774:1
so has part: feature:420374-421774:1:exon

XP_018734381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420374-421774:1:exon

AWJ20_132
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: AMO2
locus tag: AWJ20_132
so part of: sequence
location: complement(<422094..>424100)
location: region:422094-424100:-1
so has part: feature:422094-424100:-1:exon
subclass of: SO_0000010

30033109
type: Gene
SIO_000068: ncbigene

position:422094:-1
position: 422094
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:424100:-1
position: 424100
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422094-424100:-1:exon

AWJ20_132
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: AMO2
locus tag: AWJ20_132
product: putative peroxisomal copper amine oxidase
transcript id: XM_018878190.1
SIO_010081: AWJ20_132
subclass of: SO_0000673
so part of: AWJ20_132
location: complement(<422094..>424100)
location: region:422094-424100:-1
so has part: feature:422094-424100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422094-424100:-1:exon

AWJ20_132
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: AMO2
locus tag: AWJ20_132
inference: similar to AA sequence:KEGG_Orthology:K00276
note: one of two likely peroxisomal copper amine oxidase genes; similar to A.niger AO-I; allele of CaO19.10662
codon start: 1
product: putative peroxisomal copper amine oxidase
translation: MSHPLDQLTADEINRAVKLIKSRYSGKLLHFKNVETEEPPKALLVPYLEAEKAGRPIAPPPRIAYNIYYVLDDKKAEEAWIDLGTNTIIKTAVIPKPHHPPMDMIECMEMEKELFKSAEVLEAFKACGIEGDALNTISTDGWMYGADEEGAVARQMMFLIYSRNPKTNHVESNIYAFPIPFVPIFDLLEKKLIRIDWVATGGDNDDLDGFNYNTRTAGRNVLDQCAAHDYHPDLVPSLRTDLKAYNVIQPDGPSFTVEGNLVKWQKWRFRVGFTPREGMVLHDIDYDGRHTFYRLAMSEMAVPYGDPRPPLHRKMAFDFGDVGGGKCANQLNLGCDCLGVIKYFDGNLVTPSGDVDARKSVICMHEQDDGILWKHTNYRTEEPAVVRRRILVIQTILTVANYEYIFAWHLDQAANIQLEIRATGIVSTQAIDFGKRSKFGTVVSPGVLATSHQHIFNLRIDPAIDGYKNSISVQETEIIPWNHLNPRGTGFVNNKYYLEQAGYLDAKIENNRYLKIVNENKINPISGNPVGYKLSAAATALLMAPPGTVARSRAAFATHHFWVSKYKDSELYAGGIWTNQSFKEFCGVQNAVDRKEPVRNEDVVLWHSFGLTHHPRVEDFPVMPAEMLKISLHPNDFFVGNPALDVPPSTQQFNRSVEVMQTRSCHRM
SIO_010081: AWJ20_132
subclass of: SO_0000673
so part of: AWJ20_132
location: complement(422094..424100)
location: region:422094-424100:-1
so has part: feature:422094-424100:-1:exon

XP_018734382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422094-424100:-1:exon

AWJ20_133
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MNN10
locus tag: AWJ20_133
so part of: sequence
location: complement(<425344..>426708)
location: region:425344-426708:-1
so has part: feature:425344-426708:-1:exon
subclass of: SO_0000010

30033120
type: Gene
SIO_000068: ncbigene

position:425344:-1
position: 425344
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:426708:-1
position: 426708
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425344-426708:-1:exon

AWJ20_133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MNN10
locus tag: AWJ20_133
product: Mnn10p
transcript id: XM_018878201.1
SIO_010081: AWJ20_133
subclass of: SO_0000673
so part of: AWJ20_133
location: complement(<425344..>426708)
location: region:425344-426708:-1
so has part: feature:425344-426708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425344-426708:-1:exon

AWJ20_133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MNN10
locus tag: AWJ20_133
inference: similar to AA sequence:KEGG_Orthology:K05531
note: Subunit of a Golgi mannosyltransferase complex; complex mediates elongation of the polysaccharide mannan backbone; membrane protein of the mannosyltransferase family; other members of the complex are Anp1p, Mnn9p, Mnn11p, and Hoc1p; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA,IEA]; GO_component: GO:0000136 - alpha-1,6-mannosyltransferase complex [Evidence IDA] [PMID 10037752]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0000009 - alpha-1,6-mannosyltransferase activity [Evidence IDA] [PMID 10037752]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA]; GO_process: GO:0000917 - barrier septum assembly [Evidence IMP] [PMID 16034811]; GO_process: GO:0000032 - cell wall mannoprotein biosynthetic process [Evidence IMP] [PMID 10037752]; GO_process: GO:0006487 - protein N-linked glycosylation [Evidence IMP] [PMID 23210626]; GO_process: GO:0006487 - protein N-linked glycosylation [Evidence IMP] [PMID 8991513]
codon start: 1
product: Mnn10p
translation: MRLSQTVFLACSAAAILATIWYMAAFNSIDGVKWPASPNRKAPPKTDTPVLSDTEKQLERLMEAIHQKNEELGIKESLVKEKEEALAEMEHQRKVEIAAQEAKAKKEEEEKAERKKKMKELADEIKKKQKEEEEKKKKQREDEEKERKRLSDAFWLIRERLAKEEAGLLRPVEVPQELRDKYTDDNNKLVPNSKQVLLLSAFNNSAESSDNMTRKVMINRDEYCKYHGYTHLFINTTRYIKQDQNQRSPRWWKIPAIKEAFKKHPEAEWIWYADYDIMITNEMVDLAQHLLNPYILAERITYGSPVNSLGDQLDGLRVPPRDHFDVNKVDIIFSQDFFGINTASFFIRRSVFTEFLLDIWDDPFFMDKEWLREEQDAFVFLYQHYKVVFEHTAIVPQRGINSYHKYKTETGSWQKDDLALNFAVPSEDEKRSTKELFDTYFIIRKKVPEEFQIN
SIO_010081: AWJ20_133
subclass of: SO_0000673
so part of: AWJ20_133
location: complement(425344..426708)
location: region:425344-426708:-1
so has part: feature:425344-426708:-1:exon

XP_018734383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425344-426708:-1:exon

AWJ20_134
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HOC1
locus tag: AWJ20_134
so part of: sequence
location: complement(<429548..>430714)
location: region:429548-430714:-1
so has part: feature:429548-430714:-1:exon
subclass of: SO_0000010

30033131
type: Gene
SIO_000068: ncbigene

position:429548:-1
position: 429548
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:430714:-1
position: 430714
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429548-430714:-1:exon

AWJ20_134
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HOC1
locus tag: AWJ20_134
product: Hoc1p
transcript id: XM_018878212.1
SIO_010081: AWJ20_134
subclass of: SO_0000673
so part of: AWJ20_134
location: complement(<429548..>430714)
location: region:429548-430714:-1
so has part: feature:429548-430714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429548-430714:-1:exon

AWJ20_134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HOC1
locus tag: AWJ20_134
inference: similar to AA sequence:KEGG_Orthology:K05528
note: Alpha-1,6-mannosyltransferase; involved in cell wall mannan biosynthesis; subunit of a Golgi-localized complex that also contains Anp1p, Mnn9p, Mnn11p, and Mnn10p; identified as a suppressor of a cell lysis sensitive pkc1-371 allele; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA,IEA]; GO_component: GO:0000136 - alpha-1,6-mannosyltransferase complex [Evidence IDA] [PMID 10037752]; GO_component: GO:0000136 - alpha-1,6-mannosyltransferase complex [Evidence IPI] [PMID 9430634]; GO_component: GO:0000136 - alpha-1,6-mannosyltransferase complex [Evidence IDA] [PMID 9434768]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0000009 - alpha-1,6-mannosyltransferase activity [Evidence IDA] [PMID 10037752]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence ISS] [PMID 9653120]; GO_process: GO:0000032 - cell wall mannoprotein biosynthetic process [Evidence TAS] [PMID 10037752]; GO_process: GO:0006080 - substituted mannan metabolic process [Evidence TAS] [PMID 10037752]
codon start: 1
product: Hoc1p
translation: MLTFRRSVVVAATVLLLFFVFFSDPKSISAKDLLHDVELEQKLQKNRQETESAIRELQASTSRADDAQERKIELLEAQRKNLEKQLQQLRRLPPDAGVRTQLAFQFPYDTLNKFPAYIWQTWKQDFDDPNFDERFKYHVRSWDEKNNGFVHEVMSDQTARTLIRYLYMNIPQVIEAYEAMPENILRADFFRYLILLARGGTYSDVDTEALQPIPNWIPDRIDPMKLGLIIGIEADPDRPDWDEWYARRIQFCQWTIQSKPGHPVLREIVAKITETTLQKKKENRLQLPSTKDRGSEVMDWTGPGVWTDSVFGYFNDPVKSGLYYPVTWSNFTGMDQPKAVSDVLVLPITSFSPGIETMGAGGDNDPLAFVKHHFEGSWKPEDERMNSN
SIO_010081: AWJ20_134
subclass of: SO_0000673
so part of: AWJ20_134
location: complement(429548..430714)
location: region:429548-430714:-1
so has part: feature:429548-430714:-1:exon

XP_018734384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429548-430714:-1:exon

AWJ20_135
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MOG1
locus tag: AWJ20_135
so part of: sequence
location: complement(<431722..>432381)
location: region:431722-432381:-1
so has part: feature:431722-432381:-1:exon
subclass of: SO_0000010

30033142
type: Gene
SIO_000068: ncbigene

position:431722:-1
position: 431722
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:432381:-1
position: 432381
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431722-432381:-1:exon

AWJ20_135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MOG1
locus tag: AWJ20_135
product: Mog1p
transcript id: XM_018878222.1
SIO_010081: AWJ20_135
subclass of: SO_0000673
so part of: AWJ20_135
location: complement(<431722..>432381)
location: region:431722-432381:-1
so has part: feature:431722-432381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431722-432381:-1:exon

AWJ20_135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MOG1
locus tag: AWJ20_135
note: Conserved nuclear protein that interacts with GTP-Gsp1p; stimulates nucleotide release from Gsp1p; involved in nuclear protein import; nucleotide release is inhibited by Yrb1p; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 9860978]; GO_function: GO:0008536 - Ran GTPase binding [Evidence IPI] [PMID 11509570]; GO_process: GO:0051028 - mRNA transport [Evidence IEA]; GO_process: GO:0006606 - protein import into nucleus [Evidence IMP] [PMID 9860978]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Mog1p
translation: MTAVDLEKQELYGGALTSSVPVNFKDASFFRQVPDTQEVFVSDDNEYLNHSMVFDIMEMVEGCKSTKDAAVIHLNEISSLNGVDGRCKILSIDETTVSNGDVSDDEAIILTAVEPSRKWGRTEPSNGVLLLVLGLIRITKVTADILISYNVPITDPDQLKDLQELVYKSNTEGHSPSSQSVLSDTTTPATSILDTINVARSRVGGAMASFVVNDWSLFG
SIO_010081: AWJ20_135
subclass of: SO_0000673
so part of: AWJ20_135
location: complement(431722..432381)
location: region:431722-432381:-1
so has part: feature:431722-432381:-1:exon

XP_018734385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431722-432381:-1:exon

AWJ20_136
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: URB2
locus tag: AWJ20_136
so part of: sequence
location: <433916..>436552
location: region:433916-436552:1
so has part: feature:433916-436552:1:exon
subclass of: SO_0000010

30033153
type: Gene
SIO_000068: ncbigene

position:433916:1
position: 433916
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:436552:1
position: 436552
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433916-436552:1:exon

AWJ20_136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: URB2
locus tag: AWJ20_136
product: putative nucleolar protein URB2p
transcript id: XM_018878233.1
SIO_010081: AWJ20_136
subclass of: SO_0000673
so part of: AWJ20_136
location: <433916..>436552
location: region:433916-436552:1
so has part: feature:433916-436552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433916-436552:1:exon

AWJ20_136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: URB2
locus tag: AWJ20_136
inference: similar to AA sequence:KEGG_Orthology:K14862
note: similar to S. cerevisiae URB2 (YJR041C) essential nucleolar protein (Unhealthy Ribosome Biogenesis); allele of CaO19.5884
codon start: 1
product: putative nucleolar protein URB2p
translation: MSLKTAEEVTRFLRSKNESLPKLLEVAFSLRNGDLPVYLPQKDVVLLDWLLEKLSANNGTAWRLESGSWVLYKSIWEGLQQNNKTEARSRAFKNHNFASILVNSLRDIAESPSSIISVFPSLSDSLGSVLSATRDGHNVVILTRSGPQGGEVNTISQQLILEYMNCVLACTKSEEIEILSPFSKELLRTLDQVLVRGLKFSSKSSNSNGVSIFSRIIILLSTISDQSIIYFIHKLLASLFSSDSSELPSIKSSISEAIKLLETRHQSSDILTIGLGKLYNAMLSAPNGKMLSNKYFDELITEHPLSSTVLLQTALDRNIKIEQSTIRKILDKQLLDTSNTDWTIVKFVLEIDGQVVLQSEVSTKLFESINTAESNDSLEAIAALLVKSYSQPRDMPDFFVKWRTTLIEQSPTWRSEQVVKQVTSNLTGLSVHQISSLINGFLEGPSGSELPVKKSKKRKLEKSIDESVMPLAVLVNSLSPEKVPRVKESLMKILDTESLDISKVKYLIMSLSPDFVSSAMVSTEFSKHNWLDYFSSVFRVAEIHQVKEFSKVVNDLFEFLKRNKNKQVPTFLSEITSRWLFLVNQSFDESHITQLVELYLDNSANLLGLASNPYLYEQPRIINTLILAVSRDLESKAPRLQAVLPALVLFPIDVFTKGHRQDLLDSLLTLDKELDIEDCIALRKCLRLLLARPTFSSKIEKDYDVIINLFSSSAKSTELEAVTSDICTSVIGHHISNTNESSKEFISSLVAKVQKKTKKLSKKASLETWVLKFGCIVLTTAGLNEEFQTEFFNSIKQYLAAYEDSEDMASVLEYLLPVVRMTPEPFHEFRDTFGEILTASIGTRRVFMNCFKIMCLIVNGISDLRSLTAVYIVIGKFL
SIO_010081: AWJ20_136
subclass of: SO_0000673
so part of: AWJ20_136
location: 433916..436552
location: region:433916-436552:1
so has part: feature:433916-436552:1:exon

XP_018734386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433916-436552:1:exon

AWJ20_137
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MIT1
locus tag: AWJ20_137
so part of: sequence
location: <441333..>442730
location: region:441333-442730:1
so has part: feature:441333-442730:1:exon
subclass of: SO_0000010

30033164
type: Gene
SIO_000068: ncbigene

position:441333:1
position: 441333
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:442730:1
position: 442730
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441333-442730:1:exon

AWJ20_137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MIT1
locus tag: AWJ20_137
product: Mit1p
transcript id: XM_018878244.1
SIO_010081: AWJ20_137
subclass of: SO_0000673
so part of: AWJ20_137
location: <441333..>442730
location: region:441333-442730:1
so has part: feature:441333-442730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441333-442730:1:exon

AWJ20_137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MIT1
locus tag: AWJ20_137
note: Transcriptional regulator of pseudohyphal growth; protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1) and C. albicans Wor1; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Mit1p
translation: MMQSYYGHVRTQQDAILLFEACRQGLIPRIRRRLSERERFQITSGCVYIWDEQEAGMRRWTDGKSWSASRVSGAFLTYREMDGSRRPSSPDGKQSDSADGSPQGSSPQMKKRTKFWDNDVSVSSSTPASSSASDSGSGNGSEEGYRYKPNGLYKQSFSITTSSNLKLHLISYYRKEDIISGKLVQPTSDPRIKDLPIPLNLYPDTSPGVSLIPAITNAPLVGRHQMPTADGIKDPMGILVKNESFPQNGNNHNGLQKTGGFGELTGSPTPQYSNFASSTSTMPPSPSGVPPNTMVVHNGPEAQYYQQATPPAGPYILHPQQQPLTYHNPSQPPHVQVLSPPDQQPQPQPQPQSQQQGPQLPLPPPPPQQQPQQSQQQQLPQIQIHQQQQQMSQRLPGPPQPPAGHPPPSTSPRPMLPLGSPFNGTQPVLNTSSLTRSDMPHGLGPAAQFAEDRRVINILDKALII
SIO_010081: AWJ20_137
subclass of: SO_0000673
so part of: AWJ20_137
location: 441333..442730
location: region:441333-442730:1
so has part: feature:441333-442730:1:exon

XP_018734387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441333-442730:1:exon

AWJ20_138
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: rad4
locus tag: AWJ20_138
so part of: sequence
location: <445023..>446948
location: region:445023-446948:1
so has part: feature:445023-446948:1:exon
subclass of: SO_0000010

30033175
type: Gene
SIO_000068: ncbigene

position:445023:1
position: 445023
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:446948:1
position: 446948
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445023-446948:1:exon

AWJ20_138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: rad4
locus tag: AWJ20_138
product: BRCT domain protein Rad4
transcript id: XM_018878254.1
SIO_010081: AWJ20_138
subclass of: SO_0000673
so part of: AWJ20_138
location: <445023..>446948
location: region:445023-446948:1
so has part: feature:445023-446948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445023-446948:1:exon

AWJ20_138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: rad4
locus tag: AWJ20_138
codon start: 1
product: BRCT domain protein Rad4
translation: MSFLRPEGIPQIFEKWRSGLDIDIEQELEAAKLPVFDGYKICATNINIDPDRKILIDLITTHGGEYMPDLTKSVTQLISPVPTGKKYTFAKKWDIWVVSPLWVTMSVERGAALNEKFFSLDLPADKIGKGACSFDLHRQRERITKAREVAAVTEVDRTMSEISAPVKRKKSMASTAWNSILSDLGNHVVKKEIDVDRDQAAWEMNRRNAPNESEGYDHDNQDDNNSLNRRRRYEYENGDEHLIDKRNRLDIDTVNPANALFLNHCFMFVGFNDKQLKRLQSIITSHRGRLAEGEHRPTLIIVNSELPVAKYHELQLEREYTSVPIYTEWALERSLHKKKLSLDIWGQYVVHRDIPGFSGLNISLSGYAGVELLHLERLVNLLGGLYQSVFTASGDLLVSTPRSSKFKYALIWKVPIVNHLWIWGCASKGTILPLDCKEWVIDGKETEVRFLPRNKTAVVDTTVTADSRAPQAVSVAPVIPVQEKNRAESETEQSEESETMAPVSHSETSSLSELLQLARSDTDGLPVRDESHRPQKRSRDRRIVGRATESASANEVMKPATLVEVQPVEEQAHPSTQVSYLDIETQDERKKLLEALGESESAAEELRSVPDEMGPAVDLLHKRPRRNRNSTTPGRRLRANS
SIO_010081: AWJ20_138
subclass of: SO_0000673
so part of: AWJ20_138
location: 445023..446948
location: region:445023-446948:1
so has part: feature:445023-446948:1:exon

XP_018734388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445023-446948:1:exon

AWJ20_139
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RIT1
locus tag: AWJ20_139
so part of: sequence
location: complement(<447292..>448296)
location: region:447292-448296:-1
so has part: feature:447292-448296:-1:exon
subclass of: SO_0000010

30033186
type: Gene
SIO_000068: ncbigene

position:447292:-1
position: 447292
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:448296:-1
position: 448296
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447292-448296:-1:exon

AWJ20_139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RIT1
locus tag: AWJ20_139
product: Rit1p
transcript id: XM_018878265.1
SIO_010081: AWJ20_139
subclass of: SO_0000673
so part of: AWJ20_139
location: complement(<447292..>448296)
location: region:447292-448296:-1
so has part: feature:447292-448296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447292-448296:-1:exon

AWJ20_139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RIT1
locus tag: AWJ20_139
inference: similar to AA sequence:KEGG_Orthology:K15463
note: 2'-O-ribosyl phosphate transferase; modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO_function: GO:0016763 - transferase activity, transferring pentosyl groups [Evidence IEA]; GO_function: GO:0016763 - transferase activity, transferring pentosyl groups [Evidence IDA,IGI,IMP] [PMID 7954819]; GO_process: GO:0019988 - charged-tRNA amino acid modification [Evidence IGI,IMP] [PMID 7954819]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]
codon start: 1
product: Rit1p
translation: MPDALSKTIPIWCSVLNYLALGGDVMFFTPPNTVSASEHDQIRSRVIGWAELAVNNGIDVEMLKTKITKPLRPLWITPDAYLPDEVPEFDEFYPLILCTASRMVQDGTEHRQGYTYVQGAADDHEEWAQLLTPELLWFNRDSLGDSKHTDSELHEMIENLAEQSSRLGAGQNKDTSEITLIKPTNISIASRSGCDVEDFVKFDLIIDLSEKSMSADDDNRKSGYRKLTYPLAAGKKGSKELRTILPDLVAVVSNESLFKGKILVICDTGTDFSVGVALVIVCLFYSLSYDCLDSRTTAFLDKTEIRKRLVHIISEHKCNPSRNTLNAVNAYLMG
SIO_010081: AWJ20_139
subclass of: SO_0000673
so part of: AWJ20_139
location: complement(447292..448296)
location: region:447292-448296:-1
so has part: feature:447292-448296:-1:exon

XP_018734389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447292-448296:-1:exon

AWJ20_140
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RIT1
locus tag: AWJ20_140
so part of: sequence
location: complement(<448499..>448852)
location: region:448499-448852:-1
so has part: feature:448499-448852:-1:exon
subclass of: SO_0000010

30033198
type: Gene
SIO_000068: ncbigene

position:448499:-1
position: 448499
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:448852:-1
position: 448852
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448499-448852:-1:exon

AWJ20_140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RIT1
locus tag: AWJ20_140
product: Rit1p
transcript id: XM_018878276.1
SIO_010081: AWJ20_140
subclass of: SO_0000673
so part of: AWJ20_140
location: complement(<448499..>448852)
location: region:448499-448852:-1
so has part: feature:448499-448852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448499-448852:-1:exon

AWJ20_140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RIT1
locus tag: AWJ20_140
inference: similar to AA sequence:KEGG_Orthology:K15463
note: 2'-O-ribosyl phosphate transferase; modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO_function: GO:0016763 - transferase activity, transferring pentosyl groups [Evidence IEA]; GO_function: GO:0016763 - transferase activity, transferring pentosyl groups [Evidence IDA,IGI,IMP] [PMID 7954819]; GO_process: GO:0019988 - charged-tRNA amino acid modification [Evidence IGI,IMP] [PMID 7954819]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]
codon start: 1
product: Rit1p
translation: MNSNSDIDFVNGNFKESLDSLVNSSFGELSKSIRKDSRSVRNRIQSILQDSNYVQLVAASYNLPLVANERCGRWYIPPEKIKESVYFKSTDGHTGQWGFSTRRLNTHILDLILANNG
SIO_010081: AWJ20_140
subclass of: SO_0000673
so part of: AWJ20_140
location: complement(448499..448852)
location: region:448499-448852:-1
so has part: feature:448499-448852:-1:exon

XP_018734390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448499-448852:-1:exon

AWJ20_141
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FPR4
locus tag: AWJ20_141
so part of: sequence
location: <450374..>451582
location: region:450374-451582:1
so has part: feature:450374-451582:1:exon
subclass of: SO_0000010

30033209
type: Gene
SIO_000068: ncbigene

position:450374:1
position: 450374
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:451582:1
position: 451582
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450374-451582:1:exon

AWJ20_141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FPR4
locus tag: AWJ20_141
product: peptidylprolyl isomerase FPR4
transcript id: XM_018878287.1
SIO_010081: AWJ20_141
subclass of: SO_0000673
so part of: AWJ20_141
location: <450374..>451582
location: region:450374-451582:1
so has part: feature:450374-451582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450374-451582:1:exon

AWJ20_141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FPR4
locus tag: AWJ20_141
inference: similar to AA sequence:KEGG_Orthology:K14826
note: Peptidyl-prolyl cis-trans isomerase (PPIase); nuclear proline isomerase; affects expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; FPR4 has a paralog, FPR3, that arose from the whole genome duplication; GO_component: GO:0000785 - chromatin [Evidence IDA] [PMID 14981505]; GO_component: GO:0000785 - chromatin [Evidence IDA] [PMID 16959570]; GO_component: GO:0016020 - membrane [Evidence IBA]; GO_component: GO:0005730 - nucleolus [Evidence IBA,IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 22842922]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14981505]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 9371805]; GO_function: GO:0005528 - FK506 binding [Evidence IBA,IEA]; GO_function: GO:0016853 - isomerase activity [Evidence IEA]; GO_function: GO:0005527 - macrolide binding [Evidence IDA] [PMID 9371805]; GO_function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA,IEA,IEA]; GO_function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IDA] [PMID 14981505]; GO_function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IDA] [PMID 16959570]; GO_process: GO:0000412 - histone peptidyl-prolyl isomerization [Evidence IEA]; GO_process: GO:0000412 - histone peptidyl-prolyl isomerization [Evidence IDA] [PMID 16959570]; GO_process: GO:0000415 - negative regulation of histone H3-K36 methylation [Evidence IMP] [PMID 16959570]; GO_process: GO:0006334 - nucleosome assembly [Evidence IDA] [PMID 16846601]; GO_process: GO:0006334 - nucleosome assembly [Evidence IDA] [PMID 24297734]; GO_process: GO:0018208 - peptidyl-proline modification [Evidence IBA,IEA]; GO_process: GO:…
codon start: 1
product: peptidylprolyl isomerase FPR4
translation: MSAYNLLPLASFSLELIPGLPTPPIDDEFNVSVRLTMAAIDPNDAVDDEKTPSTLKIIKRVIEDYDDYDDDLLAASSDEDEDDEEEEEEEEEEEEKASKKSKKSEDEDEDEEMDDDEDDEDEDDDEDVETSETVICTLSPSSQFQQTLDLVITAGEEVLFVVEGSYPIHLTGNYVEHPYDDESDDYEESDDDEDLDDDELDYDLTPDEDEIDEDKIRELVDSEEEEEEEEEEKPAPKSKKEAKKENKKRAAEAEEEEAAAKKQKKADGKKVAFSKELEQGPTGSAAASKKPSTKKLEGGVVAEDRVVGEGPTAKSGQTVGIRYIGKLADGKVFDSNTKGKPFTFKLGAGDVIKGMDIGVTGMAVKGERRVVIPAALAYGKKKLPGIPANSELTFDIKVVKIK
SIO_010081: AWJ20_141
subclass of: SO_0000673
so part of: AWJ20_141
location: 450374..451582
location: region:450374-451582:1
so has part: feature:450374-451582:1:exon

XP_018734391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450374-451582:1:exon

AWJ20_142
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SEC1
locus tag: AWJ20_142
so part of: sequence
location: complement(<451808..>453898)
location: region:451808-453898:-1
so has part: feature:451808-453898:-1:exon
subclass of: SO_0000010

30033220
type: Gene
SIO_000068: ncbigene

position:451808:-1
position: 451808
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:453898:-1
position: 453898
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451808-453898:-1:exon

AWJ20_142
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SEC1
locus tag: AWJ20_142
product: Sec1p
transcript id: XM_018878298.1
SIO_010081: AWJ20_142
subclass of: SO_0000673
so part of: AWJ20_142
location: complement(<451808..>453898)
location: region:451808-453898:-1
so has part: feature:451808-453898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451808-453898:-1:exon

AWJ20_142
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SEC1
locus tag: AWJ20_142
inference: similar to AA sequence:KEGG_Orthology:K15292
note: Sm-like protein involved in docking and fusion of exocytic vesicles; binds to assembled SNARE complexes at the membrane and stimulates membrane fusion; localization to sites of secretion (bud neck and bud tip) is dependent on SNARE function; interacts directly with essential exocyst subunit Sec6p; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 10427089]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 11038189]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 10427089]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 11038189]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 15466482]; GO_function: GO:0000149 - SNARE binding [Evidence IDA] [PMID 10427089]; GO_process: GO:0006887 - exocytosis [Evidence IMP,IPI] [PMID 10427089]; GO_process: GO:0031340 - positive regulation of vesicle fusion [Evidence IDA] [PMID 15466482]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006904 - vesicle docking involved in exocytosis [Evidence IEA]; GO_process: GO:0006904 - vesicle docking involved in exocytosis [Evidence IPI] [PMID 10427089]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]
codon start: 1
product: Sec1p
translation: MLFDCSVKSNPITTAEANEIIEIFGLLDSVNPASRYKAVILDRETKKNFDRVIEVHEILDRNASSVQILDEKRQSESYLEAVYFIKPTAYNIECIAADFTRAPTRYACAHIFVTSNISDELLVKLKNSATGRYLKRLEIVHIDFWTLESQVFTLDDPFAIEQYYSSQCHDLVTKLVKKVASQLVGVCVMLDEYPIIRFYKPTSAIHEAHVLPFMIADEFQKQMDDYLRNNPNFKGVSEQRGRSVFLILDRSIDPFAPFLHEFTFQAMAYDLLPVKDGLKVEYFVDGKTGKEKVEGVISEKDPDWVGLRHLHMQEVIEKLTEKMDRLKTDNPHFAASQIGNGNSGGNTTVSDLQDMVASLPAFMETKDRFALNLHMASECMEILQRKGLSDIADVEQTVTLGVGADGIKPKNLADEFIALIADPNLGKAEKVRLVMLYSLHRGGLIEADYKKLMHHSGLDDTDIDVIRNMTVFGHPTFKTTLGKLKQSKLPKSYFSHSTEDVYSVSRFVPGVKNVVASAIERTLSADEFPYTKYEPTEGHDEMEVQASLRNPRQRAVWAKTTATSLNKQRVFVYMAGGFTQSEARSIYELNKKYPKEIIIGGDQVITPNNFLRILSRLSVSRKQLNLPCDQPKQQVPQHLFESDRQNRPSANQATPASTPAGQQASRPSSSKASSSTTQPERPPIKEKKSRFGKFFK
SIO_010081: AWJ20_142
subclass of: SO_0000673
so part of: AWJ20_142
location: complement(451808..453898)
location: region:451808-453898:-1
so has part: feature:451808-453898:-1:exon

XP_018734392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451808-453898:-1:exon

AWJ20_143
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PAF1
locus tag: AWJ20_143
so part of: sequence
location: complement(<454917..>456149)
location: region:454917-456149:-1
so has part: feature:454917-456149:-1:exon
subclass of: SO_0000010

30033231
type: Gene
SIO_000068: ncbigene

position:454917:-1
position: 454917
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:456149:-1
position: 456149
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454917-456149:-1:exon

AWJ20_143
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PAF1
locus tag: AWJ20_143
product: Paf1p
transcript id: XM_018878308.1
SIO_010081: AWJ20_143
subclass of: SO_0000673
so part of: AWJ20_143
location: complement(<454917..>456149)
location: region:454917-456149:-1
so has part: feature:454917-456149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454917-456149:-1:exon

AWJ20_143
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PAF1
locus tag: AWJ20_143
inference: similar to AA sequence:KEGG_Orthology:K15174
note: Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cell cycle-regulated genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; homolog of human PD2/hPAF1; GO_component: GO:0016593 - Cdc73/Paf1 complex [Evidence IPI] [PMID 11884586]; GO_component: GO:0016593 - Cdc73/Paf1 complex [Evidence IPI] [PMID 11927560]; GO_component: GO:0016593 - Cdc73/Paf1 complex [Evidence IPI] [PMID 9032243]; GO_component: GO:0005654 - nucleoplasm [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 15149594]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 15643076]; GO_component: GO:0035327 - transcriptionally active chromatin [Evidence IDA] [PMID 11983171]; GO_function: GO:1990269 - RNA polymerase II C-terminal domain phosphoserine binding [Evidence IDA] [PMID 22796944]; GO_function: GO:0000993 - RNA polymerase II core binding [Evidence IPI] [PMID 16581788]; GO_function: GO:0000983 - RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity [Evidence IDA] [PMID 16581788]; GO_function: GO:0001076 - RNA polymerase II transcription factor binding transcription factor activity [Evidence IPI] [PMID 11927560]; GO_function: GO:0001076 - RNA polymerase II transcription factor binding transcription factor activity [Evidence IPI] [PMID 16581788]; GO_function: GO:0001089 - TFIIF-class binding transcription factor activity [Evidence IMP,IPI] [PMID 9032243]; GO_function: GO:0003682 - chromatin binding [Evidence IDA] [PMID 11983171]; GO_process: GO:0006353 - DNA-templated transcription, termination [Evidence IMP] [PMID 23109428]; GO_process: GO:0000183 - chromatin silencing at rDNA [Evidence IMP] [PMID 16582434]; GO_process: GO:0070911 - global genome nucleotide-excision repair [Evidence IMP] [PMID 217…
codon start: 1
product: Paf1p
translation: MSRRQDYIARIRYQNDLPPPPCPPKLLNIPLDTSKLASSPAVLTNLVRKQPINVDIDIDLGMPLDLTEVQGIFDRGDEAGIYPSSTAPSVDRLDPKDRALLRNPKGITSVSKTQPGVSFLRRTEYISSEAVRQSSDSPLRSTALLRQKRLSVVSGPEEQLRIVENTFDASAEDLSKLKHPKKKNLKAVESWQLFPDSKMFDLQYLSVKLVGSASLSSSKRKFAPESLETAIFRQNSASNGEEWMSLYTADEETGKKLKSRLDSTEDTVVDDEEDDDQSYRFTRVQDNDIDLKLHPSSSFAEIAISFTDDGEAYYLPVVGRASLKRRRVTTLKQELINEHNIDAIDLSIREITPKESVIRDNQRSEYDKISFPYTENVDDDEDEDRPGESPEANENENDDDDEENNDLEEN
SIO_010081: AWJ20_143
subclass of: SO_0000673
so part of: AWJ20_143
location: complement(454917..456149)
location: region:454917-456149:-1
so has part: feature:454917-456149:-1:exon

XP_018734393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454917-456149:-1:exon

AWJ20_144
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PET8
locus tag: AWJ20_144
so part of: sequence
location: complement(<457981..>458799)
location: region:457981-458799:-1
so has part: feature:457981-458799:-1:exon
subclass of: SO_0000010

30033242
type: Gene
SIO_000068: ncbigene

position:457981:-1
position: 457981
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:458799:-1
position: 458799
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457981-458799:-1:exon

AWJ20_144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PET8
locus tag: AWJ20_144
product: Pet8p
transcript id: XM_018878319.1
SIO_010081: AWJ20_144
subclass of: SO_0000673
so part of: AWJ20_144
location: complement(<457981..>458799)
location: region:457981-458799:-1
so has part: feature:457981-458799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457981-458799:-1:exon

AWJ20_144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PET8
locus tag: AWJ20_144
inference: similar to AA sequence:KEGG_Orthology:K15111
note: S-adenosylmethionine transporter of the mitochondrial inner membrane; member of the mitochondrial carrier family; required for biotin biosynthesis and respiratory growth; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence ISS] [PMID 10930523]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14609944]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0000095 - S-adenosyl-L-methionine transmembrane transporter activity [Evidence IDA,IGI,IMP] [PMID 14609944]; GO_process: GO:0015805 - S-adenosyl-L-methionine transport [Evidence IDA,IGI,IMP] [PMID 14609944]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Pet8p
translation: MAGTSTDLFFFPIDTLKTRLQAKGGFFANGGWHGMYRGLGSAVVASAPGASLFFLSYESSKKYLTPIMTSKIENETLAHGLVHMLAASVGEVAACSVRVPAEVVKQRVQTSQEATSLQALKSILTNKYGEGIWRGLYRGWGTTIMREIPFTMLQFPLYEYLKHQRALSLGVDKISPGEGAVCGSIAGGFAAALTTPLDVIKTRLMLRKSRASALQVAKQLLKDEGYSAFFKGIGPRTMWISAGGAIFLGVYEAAKDTTSWLLASQASNAEPL
SIO_010081: AWJ20_144
subclass of: SO_0000673
so part of: AWJ20_144
location: complement(457981..458799)
location: region:457981-458799:-1
so has part: feature:457981-458799:-1:exon

XP_018734394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457981-458799:-1:exon

AWJ20_145
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NFS1
locus tag: AWJ20_145
so part of: sequence
location: <459771..>461255
location: region:459771-461255:1
so has part: feature:459771-461255:1:exon
subclass of: SO_0000010

30033253
type: Gene
SIO_000068: ncbigene

position:459771:1
position: 459771
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:461255:1
position: 461255
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459771-461255:1:exon

AWJ20_145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NFS1
locus tag: AWJ20_145
product: Nfs1p
transcript id: XM_018878330.1
SIO_010081: AWJ20_145
subclass of: SO_0000673
so part of: AWJ20_145
location: <459771..>461255
location: region:459771-461255:1
so has part: feature:459771-461255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459771-461255:1:exon

AWJ20_145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NFS1
locus tag: AWJ20_145
inference: similar to AA sequence:KEGG_Orthology:K04487
note: Cysteine desulfurase; involved in iron-sulfur cluster (Fe/S) biogenesis and in thio-modification of mitochondrial and cytoplasmic tRNAs; essential protein located predominantly in mitochondria; GO_component: GO:1990221 - L-cysteine desulfurase complex [Evidence IPI] [PMID 24045011]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 10406803]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 19720832]; GO_component: GO:0005634 - nucleus [Evidence IMP] [PMID 11110795]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 19720832]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0031071 - cysteine desulfurase activity [Evidence IEA,IEA]; GO_function: GO:0031071 - cysteine desulfurase activity [Evidence IDA] [PMID 12065597]; GO_function: GO:0031071 - cysteine desulfurase activity [Evidence IDA] [PMID 15220327]; GO_function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0006879 - cellular iron ion homeostasis [Evidence IMP] [PMID 10551871]; GO_process: GO:0006534 - cysteine metabolic process [Evidence IEA]; GO_process: GO:0016226 - iron-sulfur cluster assembly [Evidence IMP] [PMID 12970193]; GO_process: GO:0016226 - iron-sulfur cluster assembly [Evidence IDA] [PMID 15220327]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0070903 - mitochondrial tRNA thio-modification [Evidence IMP] [PMID 14722066]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]; GO_process: GO:0034227 - tRNA thio-modification [Evidence IMP] [PMID 14722066]; GO_process: GO:0034227 - tRNA thio-modification [Evidence IMP] [PMID 15220327]; GO_process: GO:0002098 - tRNA wobble uridine modification [Evidence IMP] [PMID 1875583…
codon start: 1
product: Nfs1p
translation: MLNITRRSVASVASIANAASTQARAASIGHRYSSTLPLIKETVSSNHVADVLSSIASRTVNAPSGPTPVAPAGSYVEEALKESKLVGQSSPGTGRPIYLDMQATTPTDPRVLDYMLQFYTGQYGNPHSRTHAYGWETDTAVETARKHVADVIGADAKEIIFTSGATESNNMSLKGVARFYKKTKNHIITTQTEHKCVLDSCRHLQDEGFDVTYLPVKSNGLIDLEDLERAIRPETAIVSIMFVNNEIGVIQPMEEIGRLCRKNKVFFHTDAAQAFGKIPIDVNKLNIDLMSISGHKIYGPKGIGACYVRRRPRVRLEPIINGGGQERGLRSGTLAPPLVAGFGEAARLMMSEMEYDSQHIRRLSNKLTSNILQLEHTVLNGDKDAHYPGCVNISFAYVEGESLLMALNDIALSSGSACTSASLEPSYVLRALGADDALAHSSIRFGIGRFTTEAEIDYVLQTVVSKVNKLRELSPLWEMVQEGIDLETIQWSQH
SIO_010081: AWJ20_145
subclass of: SO_0000673
so part of: AWJ20_145
location: 459771..461255
location: region:459771-461255:1
so has part: feature:459771-461255:1:exon

XP_018734395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459771-461255:1:exon

AWJ20_146
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HPA2
locus tag: AWJ20_146
so part of: sequence
location: <461730..>462188
location: region:461730-462188:1
so has part: feature:461730-462188:1:exon
subclass of: SO_0000010

30033264
type: Gene
SIO_000068: ncbigene

position:461730:1
position: 461730
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:462188:1
position: 462188
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461730-462188:1:exon

AWJ20_146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HPA2
locus tag: AWJ20_146
product: Hpa2p
transcript id: XM_018878341.1
SIO_010081: AWJ20_146
subclass of: SO_0000673
so part of: AWJ20_146
location: <461730..>462188
location: region:461730-462188:1
so has part: feature:461730-462188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461730-462188:1:exon

AWJ20_146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HPA2
locus tag: AWJ20_146
inference: similar to AA sequence:KEGG_Orthology:K18852
note: Tetrameric histone acetyltransferase; has similarity to Gcn5p, Hat1p, Elp3p, and Hpa3p; acetylates histones H3 and H4 in vitro and exhibits autoacetylation activity; also acetylates polyamines; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO_function: GO:0004402 - histone acetyltransferase activity [Evidence IEA]; GO_function: GO:0004402 - histone acetyltransferase activity [Evidence ISS] [PMID 10600387]; GO_function: GO:0042803 - protein homodimerization activity [Evidence IDA] [PMID 10600387]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016746 - transferase activity, transferring acyl groups [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]; GO_process: GO:0016573 - histone acetylation [Evidence ISS] [PMID 10600387]; GO_process: GO:0051289 - protein homotetramerization [Evidence IDA] [PMID 10600387]
codon start: 1
product: Hpa2p
translation: MTVTIRPIEQSDKSQYSSLFAAYLVFYKAQLPEKILEKTWERFFDDKEPVYAAVAFDDESPEKLIGFVTYVFHRSTWQYNDVIYLHDLFVDPEVRSRGTGRKLIEYVYGEADKHEVAKVYWHTQIFNHRAQLLYTKVGVRDDFVSYQRPAKK
SIO_010081: AWJ20_146
subclass of: SO_0000673
so part of: AWJ20_146
location: 461730..462188
location: region:461730-462188:1
so has part: feature:461730-462188:1:exon

XP_018734396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461730-462188:1:exon

AWJ20_147
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BFA1
locus tag: AWJ20_147
so part of: sequence
location: complement(<462286..>464847)
location: region:462286-464847:-1
so has part: feature:462286-464847:-1:exon
subclass of: SO_0000010

30033275
type: Gene
SIO_000068: ncbigene

position:462286:-1
position: 462286
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:464847:-1
position: 464847
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462286-464847:-1:exon

AWJ20_147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BFA1
locus tag: AWJ20_147
product: Bfa1p
transcript id: XM_018878352.1
SIO_010081: AWJ20_147
subclass of: SO_0000673
so part of: AWJ20_147
location: complement(<462286..>464847)
location: region:462286-464847:-1
so has part: feature:462286-464847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462286-464847:-1:exon

AWJ20_147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BFA1
locus tag: AWJ20_147
inference: similar to AA sequence:KEGG_Orthology:K02181
note: Component of the GTPase-activating Bfa1p-Bub2p complex; involved in multiple cell cycle checkpoint pathways that control exit from mitosis; specifically required when telomeres are damaged, but not for all types of chromosomal DNA damage; phosphorylated by the Polo-like kinase Cdc5p; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA]; GO_component: GO:0000922 - spindle pole [Evidence IEA]; GO_component: GO:0005816 - spindle pole body [Evidence IDA] [PMID 10220406]; GO_component: GO:0005816 - spindle pole body [Evidence IDA] [PMID 15147270]; GO_function: GO:0005096 - GTPase activator activity [Evidence IDA] [PMID 16682821]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0007067 - mitotic nuclear division [Evidence IEA]; GO_process: GO:0031578 - mitotic spindle orientation checkpoint [Evidence IGI,IMP] [PMID 16039591]; GO_process: GO:0007096 - regulation of exit from mitosis [Evidence IMP] [PMID 15147270]
codon start: 1
product: Bfa1p
translation: MPSKGVENWDDDDEFADIDESNFLISSVSSAGTQEGFYQMPASATDAAFSASNSESLRSSNLRGHASRPSNLRSFSEADENDDFSNDFDDLTTKMSKIDLAKLQGARKPSIDYSTITGTITGTVRRLGGSGSSASSGPEHYGGAFRDDMDMDLDGEDIQTIRVASGRKISSNSMAVPRVSSNARSNSRMLISGDFYRPPEQIETENKNRKKNISFDNDDEIIFDDTENLADRFTRVKNNRQMEVPGSLDDSLDDSFGFGTESRLSTYSLTTSATSYTDNEEDDDDFGFSKEAGDLFDKPSVLQQRLKEVRHQNELESERDRELLAKGRKYDTIRSNGSGNSIKANFRDNDNTITNKQVLVDFEDPDEDLLQGFDLKQGDDFISTKGTLHRNVVIKATNQRTGTSPQKKAPRETQSIADFKAIGAVPGGPDYSSVRVKKSMPVLRPPINQKISNGRGTNIAGSTSPQRPRPTHHTERRVSGNVASGSPPKQFIRASNPRPPSRNQDMFENEDYGNLTIDATSTLAMKPGQFQPKRLRPVQSMLTMQPQEQSKASRQFVRPRRGPTFEQDVLDQFDDLDVDFETESRFVATPKSKGHLYSGTVNNTSVKHVPLDTFREKFRPRKLREKDPVQNSQFSPQYQNQTPPQHQHQQHPSTVRSPTKSSLLKDNSQKKRGPKRRGPGLIRHLGVPIASEESNGMHFNPTKLVWEGNDIELKKFESVNPKTPGLIAFISNKGQQVVGDMVFDPDRLCWINIKDDHSDPFEGLDDLEVSSSIGGKHHNNAAVASAAVTAAEKLASSIGGDFAVGNEFNLSAKFIEKMKHEDDRWARKTKGWFSPNEQIDREFLKEIRSMVMR
SIO_010081: AWJ20_147
subclass of: SO_0000673
so part of: AWJ20_147
location: complement(462286..464847)
location: region:462286-464847:-1
so has part: feature:462286-464847:-1:exon

XP_018734397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462286-464847:-1:exon

AWJ20_148
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: KIP1
locus tag: AWJ20_148
so part of: sequence
location: complement(<465170..>468430)
location: region:465170-468430:-1
so has part: feature:465170-468430:-1:exon
subclass of: SO_0000010

30033286
type: Gene
SIO_000068: ncbigene

position:465170:-1
position: 465170
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:468430:-1
position: 468430
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465170-468430:-1:exon

AWJ20_148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: KIP1
locus tag: AWJ20_148
product: Kip1p
transcript id: XM_018878363.1
SIO_010081: AWJ20_148
subclass of: SO_0000673
so part of: AWJ20_148
location: complement(<465170..>468430)
location: region:465170-468430:-1
so has part: feature:465170-468430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465170-468430:-1:exon

AWJ20_148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: KIP1
locus tag: AWJ20_148
inference: similar to AA sequence:KEGG_Orthology:K10398
note: Kinesin-related motor protein; required for mitotic spindle assembly, chromosome segregation, and 2 micron plasmid partitioning; functionally redundant with Cin8p for chromosomal but not plasmid functions; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA]; GO_component: GO:0005871 - kinesin complex [Evidence IEA]; GO_component: GO:0005871 - kinesin complex [Evidence TAS] [PMID 9153752]; GO_component: GO:0005874 - microtubule [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_component: GO:0005819 - spindle [Evidence IEA]; GO_component: GO:0005876 - spindle microtubule [Evidence IDA] [PMID 1618910]; GO_component: GO:0005816 - spindle pole body [Evidence IDA] [PMID 9585415]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0008017 - microtubule binding [Evidence IEA]; GO_function: GO:0003777 - microtubule motor activity [Evidence IEA]; GO_function: GO:0003777 - microtubule motor activity [Evidence IGI] [PMID 1618910]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0005200 - structural constituent of cytoskeleton [Evidence IPI] [PMID 9585415]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0007019 - microtubule depolymerization [Evidence IMP] [PMID 19041752]; GO_process: GO:0007018 - microtubule-based movement [Evidence IEA]; GO_process: GO:0007067 - mitotic nuclear division [Evidence IEA]; GO_process: GO:0000070 - mitotic sister chromatid segregation [Evidence IGI] [PMID 7860634]; GO_process: GO:0000022 - mitotic spindle elongation [Evidence IMP] [PMID 9813090]; GO_process: GO:0030541 - plasmid partitioning [Evidence IMP] [PMID 19364922]; GO_process: GO:0090307 - spindle assembly involved in mitosis [Evidence IMP] [PMID 9813090]; GO_process: GO:0000073 - spindle pole body separation [Evidenc…
codon start: 1
product: Kip1p
translation: MTSPKASKDIPNYMKPRSPLSSSSGILTSSAGSDSPIRTPRKKSSLAMNRGPGVRSTMVTNGTPKIRKSMIRNELPNSNAAAIRSENLGGSTESESNIRVYVRCRGRNAREISENSGVVVKTNGGMKNKDITLQTGNTYSNKTYTFDRVFGPEADQEMVYEEVANKSLEEMLQGFNCTVFAYGQTGTGKTYTMTGDIDSIGKSESSGRPEENTGIIPRILFNLFKSLTAESKKRKLEHSIKLSYIELYNEELRDLIAAEGEDDKKVKIYDDSSKKGVVIHGMEEAFVKTVDEAMEVLRLGSVRRHVAATGCNDQSSRSHSVFTITVHIKEISDLTGQEFVRIGKLNLVDLAGSENINRSGAENKRAREAGMINQSLLTLGRVINALVDRSPHIPYRESKLTRILQDSLGGRTKTCIIATISPAKVSLDETLSTLDYASRAKNIKNKPQPNQTMSKQTHLMEYVMEIERLKQDLQSSRQKNGVYLSAESHQTLVDESESRRIQVEEQKMRLDVVEHQLRAAKERSDTFDQQVADMQNQIDEKSRAYDQLQNQFRLAQEELAASKLKLEQETIVRQAHQDTENKLHIIGNDLVNKLSSTVNDLDHLHSKLTSAVELSQSNELVIVSAKDRVSKAIDDIETGAYEFRDNFTAHNKSLHKTATDLIETMESTLTEVLSSIQSTANSSQGASGNMQHALVECENDTAVAIAEINKVKETIQSSISLQLKNIEATLVDHLDVVLGSVRNQYNYTKDFFDRISEQLSQSTTTTNERLNGQRQQVDEIIETLEKLSNNITRVTTRYNEQQYSLLEVELSSTTKEQELLVGQVQSALQDLTSKINILAEERKSRLTANHDLSKQQLSQIAVELGNVAGNIVPNHVMPLLDSQKESLEALASHDERIKSSLKEVKDGSKSFAHQIYKQTKETKASVANDISQNIEVAQHSATELGPLAEKLVQVNHTGYESLGRLVESQSAELRESLTNIETNIGSFESKILDCSETLATELGAHHDIWQVQQDQQLRELGDLKVYTTENLQARLVPDDMIPDRKAYSYLKVLPKTLARDVLLKQPYDENTNPREPLLDIDINSVS
SIO_010081: AWJ20_148
subclass of: SO_0000673
so part of: AWJ20_148
location: complement(465170..468430)
location: region:465170-468430:-1
so has part: feature:465170-468430:-1:exon

XP_018734398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465170-468430:-1:exon

AWJ20_149
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CAT5
locus tag: AWJ20_149
so part of: sequence
location: complement(<469640..>470230)
location: region:469640-470230:-1
so has part: feature:469640-470230:-1:exon
subclass of: SO_0000010

30033297
type: Gene
SIO_000068: ncbigene

position:469640:-1
position: 469640
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:470230:-1
position: 470230
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469640-470230:-1:exon

AWJ20_149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CAT5
locus tag: AWJ20_149
product: putative monooxygenase CAT5
transcript id: XM_018878374.1
SIO_010081: AWJ20_149
subclass of: SO_0000673
so part of: AWJ20_149
location: complement(<469640..>470230)
location: region:469640-470230:-1
so has part: feature:469640-470230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469640-470230:-1:exon

AWJ20_149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CAT5
locus tag: AWJ20_149
inference: similar to AA sequence:KEGG_Orthology:K06134
note: Protein required for ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; required for gluconeogenic gene activation; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IDA] [PMID 9452453]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0004497 - monooxygenase activity [Evidence ISS] [PMID 11435415]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO_process: GO:0006006 - glucose metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]; GO_process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA,IEA,IEA]; GO_process: GO:0006744 - ubiquinone biosynthetic process [Evidence IMP] [PMID 9452453]
codon start: 1
product: putative monooxygenase CAT5
translation: MLKRAINSVKHTNLTAKQQSKIQKIVRVDQAGELGADYIYAGQHLVFSNTKPALAPLIKHMWEQEIHHHNTFDSIQTEGRVRPSLLTPVWKAAAFGLGVGTAALGKEAAMACTEAVETVIGGHYNTQLRWLHKEFADSDIEGITELKEIIKNFRDDELEHLDTAVVEGAKQAVPYYLLTETIKTGCRVAIWIAERV
SIO_010081: AWJ20_149
subclass of: SO_0000673
so part of: AWJ20_149
location: complement(469640..470230)
location: region:469640-470230:-1
so has part: feature:469640-470230:-1:exon

XP_018734399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469640-470230:-1:exon

AWJ20_150
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CNE1
locus tag: AWJ20_150
so part of: sequence
location: <472691..>474421
location: region:472691-474421:1
so has part: feature:472691-474421:1:exon
subclass of: SO_0000010

30033309
type: Gene
SIO_000068: ncbigene

position:472691:1
position: 472691
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:474421:1
position: 474421
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472691-474421:1:exon

AWJ20_150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CNE1
locus tag: AWJ20_150
product: calnexin
transcript id: XM_018878386.1
SIO_010081: AWJ20_150
subclass of: SO_0000673
so part of: AWJ20_150
location: <472691..>474421
location: region:472691-474421:1
so has part: feature:472691-474421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472691-474421:1:exon

AWJ20_150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CNE1
locus tag: AWJ20_150
inference: similar to AA sequence:KEGG_Orthology:K08054
codon start: 1
product: calnexin
translation: MKFIESVAYALLTSSLTLGSVRAANEKPISREVDHPDFVPFNNVDPEAGLWEQFADSDEELAKRWKPSSAKSLEGTGDEYSYVGQWAFEEPTVLSGFKGDKGLVVKSPAARHAISAKLDRTLDNKDKTLVVQYEVKLQKGLECGGAYLKLLSENEDLHAEEFSGETPYQVMFGPDKCGSTNKVHFIIRRKNPISGEYEEKHLVAPPAARLNKLSNLYTLIIHPDQQFEIRIDGHTVKAGSIIEEGVFRPSFNPPKTVYDEDDVKPDDWVEDRYIPDPEQAEKPEDWDEDAPFQIPDPEAVKPADWNDDEEPFIPDPEAIKPEDWDDEEDGEWVAPEIPNPACAAGCGVWEAPKIRNPAYKGKWVQPQIENPDYKGEWEPRQIANPNYFEDSRPSDLEPIGAVGFELWTMQNDILFDNIYIGHSVAAAEYAGNNTFLPKLFIESEEEKANAPKPLKERKQYESALEFFRDDPVGYITEVTRVFILNFFVDYKQAILNQPLVALGLATAVLSAIVAALGILVGGFALIKNGVFGSSKPTPSAVADKKAKSAVAADASDADSATTTSSATSTNAVKRKT
SIO_010081: AWJ20_150
subclass of: SO_0000673
so part of: AWJ20_150
location: 472691..474421
location: region:472691-474421:1
so has part: feature:472691-474421:1:exon

XP_018734400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472691-474421:1:exon

AWJ20_151
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BUD3
locus tag: AWJ20_151
so part of: sequence
location: <475806..>480002
location: region:475806-480002:1
so has part: feature:475806-480002:1:exon
subclass of: SO_0000010

30033320
type: Gene
SIO_000068: ncbigene

position:475806:1
position: 475806
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:480002:1
position: 480002
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475806-480002:1:exon

AWJ20_151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BUD3
locus tag: AWJ20_151
product: Bud3p
transcript id: XM_018878397.1
SIO_010081: AWJ20_151
subclass of: SO_0000673
so part of: AWJ20_151
location: <475806..>480002
location: region:475806-480002:1
so has part: feature:475806-480002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475806-480002:1:exon

AWJ20_151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BUD3
locus tag: AWJ20_151
note: Protein involved in bud-site selection; required for axial budding pattern; localizes with septins to bud neck in mitosis and may constitute an axial landmark for next round of budding; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 12972503]; GO_component: GO:0000142 - cellular bud neck contractile ring [Evidence IDA] [PMID 7730410]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0007120 - axial cellular bud site selection [Evidence IMP] [PMID 2065354]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0032319 - regulation of Rho GTPase activity [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]
codon start: 1
product: Bud3p
translation: MTSQDPLFGPILAVVYRSSQKIGNKSNISSILISSHGTSGFLNVTLDEKSRFYVACQNLPEDHRNSLVRKALAVSCLRAFATMDSFTRAKLISAEVERTPIPTSGSQFSVNSNGQYVDNKMVIFDWDETAAGSLASRFRLADGKYPREIGQAILNTGVIEPKLIQANAIDVVYEDDDQTIDNNNELVYLLGEQLEQLFDPLTEYSPEHTERLYNPPLQNESYATLSDETELVRTICEELYLLQSHMRVDLMDFLHEFLIPLRVQVLGEEEEFEANGGNEHQHQQQPSNASEGDNPDTPRKLRQGRMTIRKLNTIFPPTIDEVVRINNIFYDALQQALSFGSYEVLKACGTTIPYFYKACMRHEAATKNLSRNLNYHLAALHQRCPPATAKKYTPRRIESILQSGLHLTKIKMILDRLMKTKEWSPEEKPTVDEYYQSAVGTIDAFGKQHSVAPYERFVFTPTGKILVEVASGWPKELEYGWLNRRVVCIFDAVNVLAEDTQSRDRHAVIILFTDSLVILEPKKPIPMVSASGLHIPSVADMLMHSMINEVPLRNVPEMAVVAWSKIENVHFSEYNKSKNLSILASGDGFSCSDGVKRHLALYELIRPDYTATKIVELVAKAKITNKTQPFHLFRTTRPQLKLYSTVHELEGYVNETRKSPIAVFLNLEADKATMKAHNLAACINVQFLDTAFVKVKSLSFMEYGQEKVVHKSQFADTIASEVSYLFTLFLSSANETMIDCIVSGNQLVTNFLVNYALNPSVSLIEKQKSHATSLHKRYMVTSPRAEIPTVPAIAVAPITSTKSPVVTSPAIASPPVVSPTVVKQENSPVPVEEEILTLEPPSKIAASQEKRRVSPVQFLKQKVVKSGTTNESIQKKKSFNFLRGILGTSEPPMPVIEPLKIEQPKPVQAVNPAPQPMAGASIELTAEPSMRSVSPASISSPFSQASSPYVGYTRPQKGAQIKYKPGGNIASDDEDYEDWEDMSSDGISIVSDVTSMDNAEEQQQRDVEEWFNNISEDDGDLDSVAPEFDDMNEQNATADMTVEDDDEVKSIQLTKFLDPVLKDVYNRHARNGSYARVRDTGSNPDTSMEIGQSEHETLDTLNFEDDFSYLAGLVGDEDTKTTNLEELPTSDSRRLYPDLRDSSVIFLSSYIRSSKDSTSGSFSAGHSICSSIEVVRVKRESSWESMGTSSNSSGQQVRTMPSVSELGIPMKQSYDDLPRPSQYPARVPSSGKNSLAHSRRNPSLQMRFEFPPRPQAPPPPLPVISPSFRRMINASSVNTLQLASFTVQIDRTIQELTQLKNWSLVREFQRTKRTVMQLYEMARMPVPDVVTLARTELEIRKVVTSTVWIMLSFAEQDPARSSVYHELFGSLLEMEWLRRNKILENLGDTPSIDIWTTN
SIO_010081: AWJ20_151
subclass of: SO_0000673
so part of: AWJ20_151
location: 475806..480002
location: region:475806-480002:1
so has part: feature:475806-480002:1:exon

XP_018734401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475806-480002:1:exon

AWJ20_152
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_152
so part of: sequence
location: complement(<480361..>481695)
location: region:480361-481695:-1
so has part: feature:480361-481695:-1:exon
subclass of: SO_0000010

30033331
type: Gene
SIO_000068: ncbigene

position:480361:-1
position: 480361
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:481695:-1
position: 481695
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480361-481695:-1:exon

AWJ20_152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_152
product: hypothetical protein
transcript id: XM_018878408.1
SIO_010081: AWJ20_152
subclass of: SO_0000673
so part of: AWJ20_152
location: complement(<480361..>481695)
location: region:480361-481695:-1
so has part: feature:480361-481695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480361-481695:-1:exon

AWJ20_152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_152
codon start: 1
product: hypothetical protein
translation: MSSWLYLDDYPFNTDHSNGSGPLSGSSFDTSGMWFDNNNNNSGSNSINYKDYPTALLSNPTNFSDIGGFDDFLFEGNNNHQNVSGSHHTAAPASTSSSSSPVLPQTPTDMMISTSNHGPYLGEVNDFSDSVSSTLAGVSDIGASYDHTYSNTYTNTSSNIASSSNSSTSSNATISASTSGSFSQDGYKQPNVSFSTTTNYTNDPSRLQYSPSLTDSQMNSFSSFSMDFSEFKAPLVSSVIPSVTDDLTTNTLPILPPSPKSSVSPTSADTPKSKRRLSNTRKVGESVQFSSSTNSTASPITVSSSSAASSALSGANPPRTGRKHSESRMSLPELYNLMGLGHNPTEARTREKRVLDLLQKEGFLLGQRTWIRDTEQAERQRIIDNIYAITNKDYHYTKDLIELIIRRGTYYVMQGRLRRIRRNKRAQELSNNDPDDTTENDMNL
SIO_010081: AWJ20_152
subclass of: SO_0000673
so part of: AWJ20_152
location: complement(480361..481695)
location: region:480361-481695:-1
so has part: feature:480361-481695:-1:exon

XP_018734402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480361-481695:-1:exon

AWJ20_153
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GSF2
locus tag: AWJ20_153
so part of: sequence
location: complement(<488874..>489359)
location: region:488874-489359:-1
so has part: feature:488874-489359:-1:exon
subclass of: SO_0000010

30033342
type: Gene
SIO_000068: ncbigene

position:488874:-1
position: 488874
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:489359:-1
position: 489359
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488874-489359:-1:exon

AWJ20_153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GSF2
locus tag: AWJ20_153
product: Gsf2p
transcript id: XM_018878419.1
SIO_010081: AWJ20_153
subclass of: SO_0000673
so part of: AWJ20_153
location: complement(<488874..>489359)
location: region:488874-489359:-1
so has part: feature:488874-489359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488874-489359:-1:exon

AWJ20_153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GSF2
locus tag: AWJ20_153
note: Endoplasmic reticulum (ER) localized integral membrane protein; may promote secretion of certain hexose transporters, including Gal2p; involved in glucose-dependent repression; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0030176 - integral component of endoplasmic reticulum membrane [Evidence IDA] [PMID 10377429]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005741 - mitochondrial outer membrane [Evidence IDA] [PMID 16407407]; GO_function: GO:0051082 - unfolded protein binding [Evidence IMP] [PMID 15623581]; GO_process: GO:0006457 - protein folding [Evidence IMP] [PMID 15623581]; GO_process: GO:0034394 - protein localization to cell surface [Evidence IGI,IMP] [PMID 10377429]
codon start: 1
product: Gsf2p
translation: MNPLKNRSHAKKEITREELLSIGWTGTRRATAFEWSEENRKTKIEAAGGVVNAYHQGILEDLRNSCIKLDKGEGWDSPGPQEKQKSESEVEEGRFLLSTNYFKLVYSPLAELIEDESIDQATKNTALKTFRRNGPANAPEELKEIFRKRRALEPVDKKKKK
SIO_010081: AWJ20_153
subclass of: SO_0000673
so part of: AWJ20_153
location: complement(488874..489359)
location: region:488874-489359:-1
so has part: feature:488874-489359:-1:exon

XP_018734403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488874-489359:-1:exon

AWJ20_154
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RSE1
locus tag: AWJ20_154
so part of: sequence
location: <492373..>496050
location: region:492373-496050:1
so has part: feature:492373-496050:1:exon
subclass of: SO_0000010

30033353
type: Gene
SIO_000068: ncbigene

position:492373:1
position: 492373
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:496050:1
position: 496050
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492373-496050:1:exon

AWJ20_154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RSE1
locus tag: AWJ20_154
product: Rse1p
transcript id: XM_018878429.1
SIO_010081: AWJ20_154
subclass of: SO_0000673
so part of: AWJ20_154
location: <492373..>496050
location: region:492373-496050:1
so has part: feature:492373-496050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492373-496050:1:exon

AWJ20_154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RSE1
locus tag: AWJ20_154
inference: similar to AA sequence:KEGG_Orthology:K12830
note: Protein involved in pre-mRNA splicing; component of the pre-spliceosome; associates with U2 snRNA; involved in ER to Golgi transport; GO_component: GO:0005686 - U2 snRNP [Evidence IPI] [PMID 10369685]; GO_component: GO:0005686 - U2 snRNP [Evidence IDA] [PMID 15565172]; GO_component: GO:0005686 - U2 snRNP [Evidence IDA] [PMID 16314500]; GO_component: GO:0071004 - U2-type prespliceosome [Evidence IDA] [PMID 16618970]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005681 - spliceosomal complex [Evidence IEA]; GO_function: GO:0030620 - U2 snRNA binding [Evidence IPI] [PMID 10369685]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_process: GO:0008380 - RNA splicing [Evidence IEA]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]; GO_process: GO:0000398 - mRNA splicing, via spliceosome [Evidence IPI] [PMID 16314500]; GO_process: GO:0000398 - mRNA splicing, via spliceosome [Evidence IGI,IMP] [PMID 9819400]; GO_process: GO:0000245 - spliceosomal complex assembly [Evidence IDA] [PMID 10369685]
codon start: 1
product: Rse1p
translation: MSLALYSLTLQKPGAITASIVGQFSGNRNQEIVVARGSWLELLKPDPNLGQLRSVLSYNCFGILRSLQTFRIAGSTKDNIVIGSDSGRIAILEYDEKKNTFKQIHLETFGKTGVRRIVPGQYLAVDPKGRATMIASVERNKIVYVLNRDAQLNITISSPLEAHTVKSLVYALISVDVGYDNPVFAAIECDYDDDKVYSSKLSAKVYRKKYGHDPSGELDDEDVDMEDDVPPMRRKKLTYYELDLGLNHVVRKWTDRIDSTANILVQVPGGNDGPSGVLVASDNTITYKHLNNPSHTVPIPKRRRKNYEIPAVKDETNGHTSSEFSDPDYESPVYIVSALVHKMRGAFFFLLQSNYGDVYKLWLDHDGQSVQKMYIKYFDTIPLTVSLNILKSGFLFSASESGDHLFYQFEKLGDNDDETEFTSVDEYKLKDIVFTPKPLDNIQLVDRITALNPLLQTQVANLTGDDAPQIYTITGQSNHSSLRKLEHGLLVNEIVSTELPAAPIGLWTTKVTSDDEFDKYIVLSFSNETLVLSIGASVEEVNDSAFLTSISTILVQQLGRDSLLQVHSRGVRHITANKEVNEWEPPVGTSILCASSNNSQVAVGLSSNEIVYFEVDEEGNLNEYEDHKELSESPISIAIGDIPAGRVRSPFLAVGTVDSTIRILSLDLDTTLDTLSVQALSANPSSIRIMNMDDTGFVYLHIGLENGVYIMSILDSVTGELSDTRTRFLGPRRVQLFKGKTSGVLDANGEYQGSDEIVLALSTKPWIGYTRNLSFDMVPLSYVPLSYASGFSSQDCPQGIVSVGGNMLRIFTIDSVEEKINQAKTDLKYTPRRMAENSFSNNFYVIETENNTVPDVYDQVPVDGVYNKRDSQWASSISVIDPLSQSVLSRIHLEENEAAFSIANCRFESHDAEYLIVGTAKDQIMLPQSNSGSFIRVYEYVDNGLKFLHKTAVESVPIALLEFQGRLVAGIGGKLRIYDLGLKQLLRKCEEDLGLNNIMTLNTQGNRIVVGDIRSSLTFVVYKEKENRLIPFADDPVARHITCAVMLDYDTVAAGDRFGNIFVLQCPKTISDASDEDGYGTFIRSQGHFLNGQASKLELVTHYYLEDIPTSLQRASLVSGGNECIICSGLQGTIAAFVPLTSKQDVKFFAQLENLLRENDVPIAGRDHMMYRSYYAPVKSTFDGDLCERFATLSHDKQEQIAASLDRTVREIERKVADVRVRAAF
SIO_010081: AWJ20_154
subclass of: SO_0000673
so part of: AWJ20_154
location: 492373..496050
location: region:492373-496050:1
so has part: feature:492373-496050:1:exon

XP_018734404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492373-496050:1:exon

AWJ20_155
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PTR3
locus tag: AWJ20_155
so part of: sequence
location: complement(<496166..>498571)
location: region:496166-498571:-1
so has part: feature:496166-498571:-1:exon
subclass of: SO_0000010

30033364
type: Gene
SIO_000068: ncbigene

position:496166:-1
position: 496166
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:498571:-1
position: 498571
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496166-498571:-1:exon

AWJ20_155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PTR3
locus tag: AWJ20_155
product: Ptr3p
transcript id: XM_018878439.1
SIO_010081: AWJ20_155
subclass of: SO_0000673
so part of: AWJ20_155
location: complement(<496166..>498571)
location: region:496166-498571:-1
so has part: feature:496166-498571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496166-498571:-1:exon

AWJ20_155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PTR3
locus tag: AWJ20_155
note: Component of the SPS plasma membrane amino acid sensor system; senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes; other members are Ssy1p, Ptr3p, and Ssy5p; GO_component: GO:0019897 - extrinsic component of plasma membrane [Evidence IDA] [PMID 10409731]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0043200 - response to amino acid [Evidence IMP] [PMID 10409731]
codon start: 1
product: Ptr3p
translation: MLASVSTSANYSVLKGKERINPAASNKNTVTSWSDFLYSLEKLVTHPEYVVLSCGCVLPEDDDGLQGFPWKSKSDSSQRNATRTDSNLNTICPICATPDVQILNRVPILHDIYQVIANNKRALGLGSSSASSPNNASNRRSSSTTTTQSLPQKAYTETNNSNVEIASSSPSQKRGLIELLREAARTAAANEVGIIPGKDNLIAKPVTADSNVTTSIGGFGPTSSTLTTTNGSSNMSTSATAGDSIKFDVGEWMSNIASDQQSQHTQLSEVSDLSQRSQLSQLSQPSQTSHQSQTSQLSQASKLSQTSFHSQSPQPGSQPTTMPPPSQPTSIPAPQQSQANLSRSPNFSSTSPLSQQQILHNHQKLMPSQPLFSQAELELREFNFSKSFPIYRKQFVHPTQPRNFLRSNKNSLASAISPDISHIMFASKGKCLFYTLPQDFNDPPILQHTLILENSDSSDSASIRSNKTSSSSQVTDWDKPMVSMTNNLAVVASQSGILKVIRLEPGYSEVYSYQSSFGIHCMTISPRGDLIAYAIVGRDKISGGSQPMIVLHRLGRSSLSSSHSSYLSNADSISWNEDNVNIVTLTIPYRDPIATLSFSSDACYLSCSTCTESRFMVISVMNPQEPRLVMKSSRRADVGPEYEGITSVRFFPSNSRYLAVTSVASSAPPIILDSKVSTSTRSMSSGASSGLSHPSVMMRVDKVGSSIHKAEISPRGDAVAFLDKNGLVSVMYSKGMVSELKRITIVDEVATAQTLKEAAAMQFSPNGHVLVIADRKGNVHIEDFGAALPHQAGMGKCRILS
SIO_010081: AWJ20_155
subclass of: SO_0000673
so part of: AWJ20_155
location: complement(496166..498571)
location: region:496166-498571:-1
so has part: feature:496166-498571:-1:exon

XP_018734405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496166-498571:-1:exon

AWJ20_156
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: APD1
locus tag: AWJ20_156
so part of: sequence
location: complement(<499919..>500650)
location: region:499919-500650:-1
so has part: feature:499919-500650:-1:exon
subclass of: SO_0000010

30033375
type: Gene
SIO_000068: ncbigene

position:499919:-1
position: 499919
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:500650:-1
position: 500650
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499919-500650:-1:exon

AWJ20_156
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: APD1
locus tag: AWJ20_156
product: Apd1p
transcript id: XM_018878450.1
SIO_010081: AWJ20_156
subclass of: SO_0000673
so part of: AWJ20_156
location: complement(<499919..>500650)
location: region:499919-500650:-1
so has part: feature:499919-500650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499919-500650:-1:exon

AWJ20_156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: APD1
locus tag: AWJ20_156
note: hypothetical protein; required for normal localization of actin patches and for normal tolerance of sodium ions and hydrogen peroxide; localizes to both cytoplasm and nucleus; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Apd1p
translation: MPDMSLFPKQDKPLPPSPIHAKQLVICSGTSDWPSKIDGDTTSLAGIIGASKRTLFRPQYPVMVVNCDLPATTSSKSPNSASAYLFPDNLYFDDIPLDKVDKFFENYVRPSSTEAVQSEDIPNPRPASPLILICGHASRDVRCGVIAPLLVEEFTKVLTEKGLYFDAETNPTGIRVSVSSHVGGHAFAGNVIYHPSDSSSAALPASVWYGKVFPHHVQGIVEETILNGRVVQPLLRGYGPRKW
SIO_010081: AWJ20_156
subclass of: SO_0000673
so part of: AWJ20_156
location: complement(499919..500650)
location: region:499919-500650:-1
so has part: feature:499919-500650:-1:exon

XP_018734406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499919-500650:-1:exon

AWJ20_157
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_157
so part of: sequence
location: complement(<501788..>502357)
location: region:501788-502357:-1
so has part: feature:501788-502357:-1:exon
subclass of: SO_0000010

30033386
type: Gene
SIO_000068: ncbigene

position:501788:-1
position: 501788
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:502357:-1
position: 502357
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501788-502357:-1:exon

AWJ20_157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_157
product: hypothetical protein
transcript id: XM_018878461.1
SIO_010081: AWJ20_157
subclass of: SO_0000673
so part of: AWJ20_157
location: complement(<501788..>502357)
location: region:501788-502357:-1
so has part: feature:501788-502357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501788-502357:-1:exon

AWJ20_157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_157
codon start: 1
product: hypothetical protein
translation: MFDFGAPNNKDGKLYRYDAKSSKVEVIADGLQIPNGIGFSPDNKVMYFIDSLTHFIFKFDYDVATGELSNRREFIRVDPGEPDGMTTSKDGHLWVAVWGQSSVLRYSPEGELVEVYKFPAERTSCPTFAGPNFDELIVTTASLVHADEEETEEKKNKINGTNGYAKDFGGTIFRVKVDVSGIPSNIVSI
SIO_010081: AWJ20_157
subclass of: SO_0000673
so part of: AWJ20_157
location: complement(501788..502357)
location: region:501788-502357:-1
so has part: feature:501788-502357:-1:exon

XP_018734407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501788-502357:-1:exon

AWJ20_158
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: JLP1
locus tag: AWJ20_158
so part of: sequence
location: complement(<503259..>504443)
location: region:503259-504443:-1
so has part: feature:503259-504443:-1:exon
subclass of: SO_0000010

30033397
type: Gene
SIO_000068: ncbigene

position:503259:-1
position: 503259
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:504443:-1
position: 504443
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503259-504443:-1:exon

AWJ20_158
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: JLP1
locus tag: AWJ20_158
product: Jlp1p
transcript id: XM_018878472.1
SIO_010081: AWJ20_158
subclass of: SO_0000673
so part of: AWJ20_158
location: complement(<503259..>504443)
location: region:503259-504443:-1
so has part: feature:503259-504443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:503259-504443:-1:exon

AWJ20_158
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: JLP1
locus tag: AWJ20_158
note: Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase; involved in sulfonate catabolism for use as a sulfur source; contains sequence that resembles a J domain (typified by the E. coli DnaJ protein); induced by sulphur starvation; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0051213 - dioxygenase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0000907 - sulfonate dioxygenase activity [Evidence IDA] [PMID 10482536]; GO_process: GO:0046306 - alkanesulfonate catabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0044273 - sulfur compound catabolic process [Evidence IMP] [PMID 10482536]
codon start: 1
product: Jlp1p
translation: MSPPTAVEIIEEGIRNQSIKTNNAVLKEGFAANYIDKLPEHSRKRFERHGVDLSRGYPERPSHIPIWLDEAAKIHSSRSEYVEKGAKADPEKKALFGAAKEVINLTKHIGTEIVGLQLADLNQTQLDELALLIAERSVVFFRDQDLAPQKQLEIGKYFGDVEIHPQVPHVPGLPGVSVIWPDFQVFEGRVVNFRKPGGASGWHTDLDHLIQSAAITHLHNDEIPAVGGDTSWSSGYGLYDKLSPALQKFLEGKTAIHRSAHAYLDKNDQFGGPKYIETEHPIVRTHPATGWKAVWVNRAHTVRIVGLEPAESAAILNLLYDIIEKNLDIQVRFRWQPTKEGLGTSALWDNRITIHNAVGDYSEPRHGTRVSGLGEKPYYDPNSKSRHEALGLSV
SIO_010081: AWJ20_158
subclass of: SO_0000673
so part of: AWJ20_158
location: complement(503259..504443)
location: region:503259-504443:-1
so has part: feature:503259-504443:-1:exon

XP_018734408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503259-504443:-1:exon

AWJ20_159
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SEO1
locus tag: AWJ20_159
so part of: sequence
location: <505286..>506869
location: region:505286-506869:1
so has part: feature:505286-506869:1:exon
subclass of: SO_0000010

30033408
type: Gene
SIO_000068: ncbigene

position:505286:1
position: 505286
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:506869:1
position: 506869
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505286-506869:1:exon

AWJ20_159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SEO1
locus tag: AWJ20_159
product: putative permease SEO1
transcript id: XM_018878481.1
SIO_010081: AWJ20_159
subclass of: SO_0000673
so part of: AWJ20_159
location: <505286..>506869
location: region:505286-506869:1
so has part: feature:505286-506869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505286-506869:1:exon

AWJ20_159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SEO1
locus tag: AWJ20_159
codon start: 1
product: putative permease SEO1
translation: MPRIKKPGPLLSDPYSTIGYQAMSSSIESISKTAEYPVEERQLSSFDDVSEIEELERRKGWKYRLASVIWDSADKGKDERALLFKLDIFFLSSIMLGYFIKTLDMNNINTAYINGMQEDLKMKGSDLNLIQTCWTVGYIVGQFPSNLILHRVSPRYYLGALEIMWSILTVLRITCNTLPKMYAISFFIGLLEAGFFPAVEFLLGSWYLPDELTKRSTLFAVSGTAASMVTGYLQAAIIKTLSHKKLASYKYLFVLDAVISFPIALYTMVANPDTPAYTTSWYLNDRDKKIAIARTTKYSGAKHPPKRKIGKDTLKRTFSTWHIFLFPVIFLAFNNTCNSSSQPTFQSWLKSLGYTPVEYNVYPTAVNGAGIGFALVVAWISDAFNGLNWPFVLLYFFLQALGSLFLAIWHIPRGLHWFSYFLVGIPTAWGQPMIFAWVNRLLSGDTDKRLLTVTATNNLAYVTNAWVPILTWNAGDMPRYFIGFTYNATLAVVGFILTISAIFLERRDKQTRKISEAEAHSSEVQDA
SIO_010081: AWJ20_159
subclass of: SO_0000673
so part of: AWJ20_159
location: 505286..506869
location: region:505286-506869:1
so has part: feature:505286-506869:1:exon

XP_018734409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505286-506869:1:exon

AWJ20_160
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_160
so part of: sequence
location: <507292..>508113
location: region:507292-508113:1
so has part: feature:507292-508113:1:exon
subclass of: SO_0000010

30033420
type: Gene
SIO_000068: ncbigene

position:507292:1
position: 507292
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:508113:1
position: 508113
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507292-508113:1:exon

AWJ20_160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_160
product: hypothetical protein
transcript id: XM_018878493.1
SIO_010081: AWJ20_160
subclass of: SO_0000673
so part of: AWJ20_160
location: <507292..>508113
location: region:507292-508113:1
so has part: feature:507292-508113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507292-508113:1:exon

AWJ20_160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_160
inference: similar to AA sequence:KEGG_Orthology:K06911
codon start: 1
product: hypothetical protein
translation: MFKVTLRGAATRRFVKTDWITAYQSFGEGPKYQFAGFGNLEALNEDRFPPRRGVNMHHHNDHEIFTYMLSGGLTHRDTMAAKEEDKSYTIHRGDVQFISSGSGIRHSEKNAQGNEVAHLLQFWVKPWKNCLGPRYETKTFSEADKRKGFVTIISPFSEKENSNSQPVVPGSIAINSDFSMGAAIIPPGEKFSWTVTGAANASGNSSVGDPSPSRNIYVYLPSLQDGLSKIKVAGQETLSEGDGAFVENIRPGDLLEIESVGEKDAEVVVTDSA
SIO_010081: AWJ20_160
subclass of: SO_0000673
so part of: AWJ20_160
location: 507292..508113
location: region:507292-508113:1
so has part: feature:507292-508113:1:exon

XP_018734410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507292-508113:1:exon

AWJ20_161
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: STL1
locus tag: AWJ20_161
so part of: sequence
location: <509317..>510801
location: region:509317-510801:1
so has part: feature:509317-510801:1:exon
subclass of: SO_0000010

30033431
type: Gene
SIO_000068: ncbigene

position:509317:1
position: 509317
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:510801:1
position: 510801
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509317-510801:1:exon

AWJ20_161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: STL1
locus tag: AWJ20_161
product: glucose-inactivated glycerol proton symporter STL1
transcript id: XM_018878504.1
SIO_010081: AWJ20_161
subclass of: SO_0000673
so part of: AWJ20_161
location: <509317..>510801
location: region:509317-510801:1
so has part: feature:509317-510801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509317-510801:1:exon

AWJ20_161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: STL1
locus tag: AWJ20_161
codon start: 1
product: glucose-inactivated glycerol proton symporter STL1
translation: MMPCFLWYGYNLAILGGVLSQPNFYNQFPKLNTDTTTGATHHYNSNIQGTVSSIYTVGGMFGALSASFYGDILGRRKTIFIASILCLIGAVLMTSSFSLGQLIVGRLILGLSAGTVSASVPVYQSEISSASKRGTHVAYTGFFITSGILIAYWIDFGCSYINSSASWRVPFAVQLILPLISGTLIFFLPESPHWLIKVGRVDEARSIMSLFVDNADPYSDPVEEQVAEIQRSLSVMQTLRFRDVLSMKDSRIFHRVLLALFSLFCSQACGVNAVTFYAPSLLAQAGISPGMAGWLAGCTEIVQPIGAYLAVLTVDSFGRRRLLMTAAIGMGISMIVMAACTAQTENKSALHAGVAFLFIINLAYSYGFLGVCFVYSAEIAPQRIRALINGFATFVTWGTNFWVVEVTPVAFASIGWRYYIVYAATNLALILPVLYFCFPETSGLHLDQIDEVFSKAKGFFDIVRVAKEVKQEGYQHEPSVIDTKEQIEEEESIN
SIO_010081: AWJ20_161
subclass of: SO_0000673
so part of: AWJ20_161
location: 509317..510801
location: region:509317-510801:1
so has part: feature:509317-510801:1:exon

XP_018734411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509317-510801:1:exon

AWJ20_162
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DCC1
locus tag: AWJ20_162
so part of: sequence
location: complement(<511409..>512173)
location: region:511409-512173:-1
so has part: feature:511409-512173:-1:exon
subclass of: SO_0000010

30033442
type: Gene
SIO_000068: ncbigene

position:511409:-1
position: 511409
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:512173:-1
position: 512173
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511409-512173:-1:exon

AWJ20_162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DCC1
locus tag: AWJ20_162
product: Dcc1p
transcript id: XM_018878515.1
SIO_010081: AWJ20_162
subclass of: SO_0000673
so part of: AWJ20_162
location: complement(<511409..>512173)
location: region:511409-512173:-1
so has part: feature:511409-512173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511409-512173:-1:exon

AWJ20_162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DCC1
locus tag: AWJ20_162
note: Subunit of a complex with Ctf8p and Ctf18p; shares some components with Replication Factor C; required for sister chromatid cohesion and telomere length maintenance; GO_component: GO:0031390 - Ctf18 RFC-like complex [Evidence IPI] [PMID 11389843]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006260 - DNA replication [Evidence IEA]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IMP] [PMID 12482937]; GO_process: GO:0035753 - maintenance of DNA trinucleotide repeats [Evidence IMP] [PMID 21347277]; GO_process: GO:0007064 - mitotic sister chromatid cohesion [Evidence IMP] [PMID 11389843]; GO_process: GO:0007064 - mitotic sister chromatid cohesion [Evidence IGI] [PMID 17483413]
codon start: 1
product: Dcc1p
translation: MADQSSTPSIEFYSQLEPDGFYRLLELTPELADILESGASLSLKAPETDSHLILCTVSKTYRVRQMNQSNTLLLSDSRDLSFSSESSEAPPYLVAFGSASSYLEVIDEQSPKLSVESIPLYMGNGVISGLHEPNRPTSIHYESLGVLRSRAPLSDAEFNEKWRLQGGVEIDDIACRINDSLTHSIICDILATVIGSKLDLSAVNCIQLLPLLPSDAEPLAVVEAVMARFSQSASSNCKYLVPQFLFYIYCFPLK
SIO_010081: AWJ20_162
subclass of: SO_0000673
so part of: AWJ20_162
location: complement(511409..512173)
location: region:511409-512173:-1
so has part: feature:511409-512173:-1:exon

XP_018734412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511409-512173:-1:exon

AWJ20_163
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RAD54
locus tag: AWJ20_163
so part of: sequence
location: <512409..>515585
location: region:512409-515585:1
so has part: feature:512409-515585:1:exon
subclass of: SO_0000010

30033453
type: Gene
SIO_000068: ncbigene

position:512409:1
position: 512409
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:515585:1
position: 515585
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512409-515585:1:exon

AWJ20_163
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RAD54
locus tag: AWJ20_163
product: DNA-dependent ATPase RAD54
transcript id: XM_018878526.1
SIO_010081: AWJ20_163
subclass of: SO_0000673
so part of: AWJ20_163
location: <512409..>515585
location: region:512409-515585:1
so has part: feature:512409-515585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512409-515585:1:exon

AWJ20_163
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RAD54
locus tag: AWJ20_163
inference: similar to AA sequence:KEGG_Orthology:K10875
note: DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family of DNA translocases; forms nuclear foci upon DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IMP] [PMID 12399378]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA,IEA]; GO_function: GO:0015616 - DNA translocase activity [Evidence IDA] [PMID 10506208]; GO_function: GO:0008094 - DNA-dependent ATPase activity [Evidence IDA] [PMID 10506208]; GO_function: GO:0004386 - helicase activity [Evidence IEA,IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0032392 - DNA geometric change [Evidence IDA] [PMID 10506208]; GO_process: GO:0006281 - DNA repair [Evidence IEA]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0006338 - chromatin remodeling [Evidence IDA] [PMID 12577053]; GO_process: GO:0045002 - double-strand break repair via single-strand annealing [Evidence IMP] [PMID 8849880]; GO_process: GO:0045003 - double-strand break repair via synthesis-dependent strand annealing [Evidence TAS] [PMID 10357855]; GO_process: GO:0030491 - heteroduplex formation [Evidence IDA] [PMID 10506208]; GO_process: GO:0032079 - positive regulation of endodeoxyribonuclease activity [Evidence IDA] [PMID 19129197]; GO_process: GO:0000722 - telomere maintenance via recombination [Evidence IMP] [PMID 11238918]
codon start: 1
product: DNA-dependent ATPase RAD54
translation: MMAEVRPRTTTRKRLPRLTSSGGSDLVVIPYDQHEEPTPILQNTINECILPDNGGIIDGYEPIYLDNETDVNLIDGLMVVPDHATGIDGLPITPIDTSPSHTDVMSIGAVLSNSQPTELSLDNGDTLGEIEEVSTPVAEKSQPKSRKESKSKADSQKKSKSSQGSSQNMNQAKSRSQKRSQSQNQIVENIALEEEENEVKEAEKTEENQEVIKKPKSLPRRPRPFDLASPCTPIHSSAIRRPQSAQNSPLGINKRLKTDPLSTITKPFRVPTKSAINANRPFSRRDDLSRSASRKIKSYAEIENIETEQFNKEIEQPASPYTPGGGIKRLGTKVDPALKNSIDASDMILGRRFITPLKEKPLNMGPSAALGMKRRHEFVPRPLHDPSGEFAIVLFDPTIDDEPVEEIDPNKIVEGSEDENLGETEVTPVAPTTPSKPSLADILGLSNEKKKVYPKVPVVIDPRLAKILRPHQVEGVKFLYKCVTGRVQKDANGCIMADEMGLGKTLQCITLMWTLLKQSPEGNGGTISKCIVVCPSSLVRNWANELVKWLGEGAITPLAADGKSVKNADLSAALRQWSTASGRQIVRPVLIISYETLRRHCDDLRNTEIGLLLADEGHRLKNGESLTFTALDALNVQRRVILSGTPIQNDLSEYFSLLSFANPGLLGTRLEFRKNYENAILKGRDSFATEEEVTDGETKLKELSLLVSRFIIRRTNDILSKYLPVKYEHVVFCNMTEFQINLYNKFIASPDVKKVIKGSKNNPLKSIGILKKLCNHPDLLDLSRDIQGAEDVLPSDYVHPSHRGGRDRGVRTLYSGKFMVLERMLARIRYETNDKIVIISNYTQTLDLIEAMCRESRYGAFRLDGKMAISKRQKLVDKFNDPEGSEFVFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFVYRFISTGSIEEKIFQRQSMKQSLSSCVVDEAEDVERLFSFNDLKKLFSFDGHTLSDTHDTFKCKRCKDNRQVAKAPAMLYGDATTWNHFTKPELENIQDLLLRQELTEEIVSFVFQYISH
SIO_010081: AWJ20_163
subclass of: SO_0000673
so part of: AWJ20_163
location: 512409..515585
location: region:512409-515585:1
so has part: feature:512409-515585:1:exon

XP_018734413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512409-515585:1:exon

AWJ20_164
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FAS2
locus tag: AWJ20_164
so part of: sequence
location: complement(<515730..>521126)
location: region:515730-521126:-1
so has part: feature:515730-521126:-1:exon
subclass of: SO_0000010

30033464
type: Gene
SIO_000068: ncbigene

position:515730:-1
position: 515730
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:521126:-1
position: 521126
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515730-521126:-1:exon

AWJ20_164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FAS2
locus tag: AWJ20_164
product: trifunctional fatty acid synthase subunit FAS2
transcript id: XM_018878537.1
SIO_010081: AWJ20_164
subclass of: SO_0000673
so part of: AWJ20_164
location: complement(<515730..>521126)
location: region:515730-521126:-1
so has part: feature:515730-521126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515730-521126:-1:exon

AWJ20_164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FAS2
locus tag: AWJ20_164
inference: similar to AA sequence:KEGG_Orthology:K00667
note: Alpha subunit of fatty acid synthetase; complex catalyzes the synthesis of long-chain saturated fatty acids; contains the acyl-carrier protein domain and beta-ketoacyl reductase, beta-ketoacyl synthase and self-pantetheinylation activities; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 6025308]; GO_component: GO:0005835 - fatty acid synthase complex [Evidence IDA] [PMID 65153]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IDA] [PMID 365179]; GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IMP] [PMID 1100391]; GO_function: GO:0003824 - catalytic activity [Evidence IEA,IEA]; GO_function: GO:0004312 - fatty acid synthase activity [Evidence IGI] [PMID 10785388]; GO_function: GO:0004312 - fatty acid synthase activity [Evidence IMP] [PMID 65153]; GO_function: GO:0004321 - fatty-acyl-CoA synthase activity [Evidence IEA]; GO_function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO_function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IGI,IMP] [PMID 10785388]; GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA,IEA]; GO_process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0006631 - fatty acid metabolic process [Evidence IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA];…
codon start: 1
product: trifunctional fatty acid synthase subunit FAS2
translation: MATRTLKSKYESYDAALSLQRQVLCYSKDTKEIYYTPDPVEPAESESTPASGDAPAAAAPAAVAAAPVAAAAAAGPAASVEDTPVKAVEVLHALVAQKIKKTLDQVPLSKAVKDLVGGKSTVQNEILGDLGKEFGSTPEKPEETPLGELAEQFQDSFSGQLGKQSSSLVSRLISSKMPGGFNITSARKYLNTRWGLGPGRQDSVFLVAITLEPKNRLGDEAAAKAFLDDVTTKYASIAGVNLSSASAAGGAAAGGAGGAVIDSAAFEELTKDQRYLVQQQLELFARYLKVDLRDGDKAFVAQKEATALLQQELDLWYSEHGDFYASGIKPVFSPLKARVYDSYWNWARQDCLTMFYDIIFGRLSNVDREIVSRCISIMNRTNPTLIDFMQYYIDHVPTDRGATYELAQELAQKLLQNCKEAVDADPVYKDVNYPTGPKTTVDSNGNISYAEVPRPAVRKLEQYVQDMAAGGEMTKDPAAGSHTRAELAKIYKRISSAADGKSSGKLKLDALYADLIKAIDTVEAESSPKKALDTVSAKHMREETIPFLHLKKKSGEIWDFDRDLSATYLDGLEVAARDGLTFANKNVLITGAGAGSIGADILQGLISGGAKVVVTTSRYSREVTEYYQSIYTKFGASGSTLIVVPFNQASSSDVRALVDYIYNDTKKGGLGWDLDFVIPFAAIPENGIELDGIDSKSELAHRLMLTNLLRLLGSIKSHKAANGFETRPAQVILPMSPNHGTFGADGLYSESKLSLETLFNRWYSESWSSYLTICGAVIGWTRGTGLMSQNNIIAEGVESLGVRTFSQKEMAFNILGLMTPTIVNICQQQPVWADLNGGLQFVENLKDVTGKLRKELVDSSELRRAVSVETAIEHKVVNGPDADLPYQKAIVKPRANHKFEFPKLKSYEELRKIAPELEGILDLEKVVVATGFSEVGPWGNSRTRWDMEINGAFSLEGAIEMAWIMGLIKHHSGPLKGKPYTGWVDTKTNEPVDDKDVKSKYESYILEHSGIRLIEPELFHGYDPLKKQLLQEIIVEHDLEPFEASKEAADQFKLEQGNKVEVFEIPESGQYTVRFLKGAKIYIPKALKFDRLVAGQIPTGWDARRYGIGEDIISQVDPITLYVLVSTVEALLSAGITDPYEFYKYVHLSEVGNCSGSGMGGVTALRGMFKDRYLDRPVQNDILQESFINTMSAWVNMLLLSSSGPIKTPVGACATAIESVDSGIELIESGKAKIVIVGGYDDFQEEGSHEFGNMNATSNSLTEFEHGRTPKEMSRPNSTSRSGFMESQGAGIQILMNAKLAIDMGVPIYGIVALTSTASDKIGRSVPAPGKGIMTTARENISDLKFPYRLLDVKYRKRQIESRRAQIKQWTESEFEYLQDEFEAIKATTSAADAEAFFKERSQQIENEARRQEKEALGTWGNNFYKSDPRIAPIRGALATYNLTIDDIGVSSFHGTSTKANDKNESGAINGMLNHLGRSKGNPVLGVFQKYLTGHPKGAAGAWMLNGVMQILNSGTVPGNPNADNIDAQMEGFDKIVYPSVTLQTYGVKAATVTSFGFGQKGAIAVVIHPDYVLATLNKKAYETYAAKVGTRYNKAYRYLHNAIAENSMFVSKSKAPYTDEQEMSVYLNPLARVSYDKKSESLIFNAKKLEQANPTQSSGHTEAVLKQLAANSLSGGAGNIGVDVQSLSGVNVENETFLERNFTDAERQYCAKSADPLSSYTGTWSAKEAVFKSLGVKSQGAGASLKSIEVLRDAKGAPVVTLHGEAKAAADAAGVKNVKVSISHDEFQAVAVAVSEK
SIO_010081: AWJ20_164
subclass of: SO_0000673
so part of: AWJ20_164
location: complement(515730..521126)
location: region:515730-521126:-1
so has part: feature:515730-521126:-1:exon

XP_018734414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515730-521126:-1:exon

AWJ20_165
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GPI8
locus tag: AWJ20_165
so part of: sequence
location: complement(<522891..>524120)
location: region:522891-524120:-1
so has part: feature:522891-524120:-1:exon
subclass of: SO_0000010

30033475
type: Gene
SIO_000068: ncbigene

position:522891:-1
position: 522891
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:524120:-1
position: 524120
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522891-524120:-1:exon

AWJ20_165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GPI8
locus tag: AWJ20_165
product: Gpi8p
transcript id: XM_018878547.1
SIO_010081: AWJ20_165
subclass of: SO_0000673
so part of: AWJ20_165
location: complement(<522891..>524120)
location: region:522891-524120:-1
so has part: feature:522891-524120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522891-524120:-1:exon

AWJ20_165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GPI8
locus tag: AWJ20_165
inference: similar to AA sequence:KEGG_Orthology:K05290
note: ER membrane glycoprotein subunit of the GPI transamidase complex; adds glycosylphosphatidylinositol (GPI) anchors to newly synthesized proteins; human PIG-K protein is a functional homolog; GO_component: GO:0042765 - GPI-anchor transamidase complex [Evidence IEA]; GO_component: GO:0042765 - GPI-anchor transamidase complex [Evidence IDA] [PMID 11598210]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IDA] [PMID 8978684]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003923 - GPI-anchor transamidase activity [Evidence IEA]; GO_function: GO:0003923 - GPI-anchor transamidase activity [Evidence IMP] [PMID 10793132]; GO_function: GO:0003923 - GPI-anchor transamidase activity [Evidence IMP] [PMID 11598210]; GO_function: GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO_function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_process: GO:0006506 - GPI anchor biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0016255 - attachment of GPI anchor to protein [Evidence IEA]; GO_process: GO:0016255 - attachment of GPI anchor to protein [Evidence IMP] [PMID 11598210]; GO_process: GO:0006508 - proteolysis [Evidence IEA,IEA]
codon start: 1
product: Gpi8p
translation: MRFIYFLNLLQIAAVLLLGFSRAQEFTEEAAPEETAEKFFRTSRHTNNWAVLVSTSRFWFNYRHMANVLSMYRTIKRLGIPDSQIILMLSDDVSCNPRNAFPGTVYNNADRALDLYGDNIEVDYRGYDVTVENFIRLLTDRWDADTPRSKRLLTDDRSNIFVYMTGHGGNEFLKFQDAEEIGAFDIADAFEQMWEKRRYNEILFMIDTCQANTMYSKFYSPNILAVGSSAMDENSYSHHADQDVGVAVIDRFTYYNLEFLESIDKTSKETMADLFASYNPADIHSNPGIRSDLFKDPLDQVLITDFFGNVQNVELGQVETNVLELAKLARDEELIGQNAFNGENTSTPEKKPNLPQPEVNSGSRAKNKPNSPSPIQHLLESEAKSSSHFLIAISILTAVTALVVGSSYF
SIO_010081: AWJ20_165
subclass of: SO_0000673
so part of: AWJ20_165
location: complement(522891..524120)
location: region:522891-524120:-1
so has part: feature:522891-524120:-1:exon

XP_018734415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522891-524120:-1:exon

AWJ20_166
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: IRC3
locus tag: AWJ20_166
so part of: sequence
location: <525252..>527288
location: region:525252-527288:1
so has part: feature:525252-527288:1:exon
subclass of: SO_0000010

30033486
type: Gene
SIO_000068: ncbigene

position:525252:1
position: 525252
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:527288:1
position: 527288
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525252-527288:1:exon

AWJ20_166
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: IRC3
locus tag: AWJ20_166
product: Irc3p
transcript id: XM_018878557.1
SIO_010081: AWJ20_166
subclass of: SO_0000673
so part of: AWJ20_166
location: <525252..>527288
location: region:525252-527288:1
so has part: feature:525252-527288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525252-527288:1:exon

AWJ20_166
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: IRC3
locus tag: AWJ20_166
inference: similar to AA sequence:KEGG_Orthology:K17677
note: Putative RNA helicase of the DEAH/D-box family; null mutant displays increased levels of spontaneous Rad52p foci; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004004 - ATP-dependent RNA helicase activity [Evidence ISS] [PMID 10322435]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA,IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA,IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0008152 - metabolic process [Evidence IEA,IEA]
codon start: 1
product: Irc3p
translation: MIVRKAFPGSLLSSESTLTARFLSRLSAYNNLKSCSQCFVPSIYAQHGTFLRHNSTKLGRPEGLPLRDYQQECIEECLITIKKGYRRFAVSMPTGSGKTRTFYGLLEAISRGGAHSGHGKKWLILAHREELITQAYDHAKRLFPDLKTSMEMGKHTADPDADIIVASVQSISREKRLERFDGSDFSAIVIDEAHHAPAASYAKVLNHLGANNPDSEIVVAGFSATLSRMDGLALGSTFDYIAYHKDLSEMIKNGYLTDIKFTTIATDVDLTGVKKARGDFATGSLSKAVDTPALNELVYKAWKRQSGKHSLIFGVNIEHVSNLALTFRENGIDAHVVTSDTPRDLRRGLVEDFRNGHLPVLINCGIFTEGTDIPNIDTVILVRPTRSAGLLMQMIGRGLRLHPGKEVCHIIDMFGSSSNANALATVPTLAGLDPSQVRVIDKAEIANGVSRPRVVASSKDPDSVYVEDFDNLDDFLNRNGGKLNTSAISRSRLNWIPSGQNNFLLFGKEGYLRLCPDANPSKLAPKYSLIQYFENPFREDNRGAKYLRKYIFESMPDFNAAVNAAELFARQNCPYHLVAKNVPWRSQPCTINQEKAVMKLFTKVVVDGDEEGMKRAKTICKDLTKGQSANIINLASIGNKSILKDMLYPKKEKKSKADLFEFLQAGPVNKLEIKLSQN
SIO_010081: AWJ20_166
subclass of: SO_0000673
so part of: AWJ20_166
location: 525252..527288
location: region:525252-527288:1
so has part: feature:525252-527288:1:exon

XP_018734416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525252-527288:1:exon

AWJ20_167
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_167
so part of: sequence
location: <527434..>529569
location: region:527434-529569:1
so has part: feature:527434-529569:1:exon
subclass of: SO_0000010

30033497
type: Gene
SIO_000068: ncbigene

position:527434:1
position: 527434
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:529569:1
position: 529569
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527434-529569:1:exon

AWJ20_167
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_167
product: Zinc transport protein zntB
transcript id: XM_018878567.1
SIO_010081: AWJ20_167
subclass of: SO_0000673
so part of: AWJ20_167
location: <527434..>529569
location: region:527434-529569:1
so has part: feature:527434-529569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527434-529569:1:exon

AWJ20_167
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_167
codon start: 1
product: Zinc transport protein zntB
translation: MTVFVEYDTGDANLPNPSGHVNDLYEDISDSTETDSLTDDEESTFESRHPRSSWIFSNIASINPIHSFENRRNNVPPPVSLQHPKDDVPSHKSPIPVSPLSNTRPISDIILKQSIDDKGRQLPAVPPKSDGPQNARFDSQNIYTDTVRVKRRYSSHPGVTNAAKRKPGWEPGIDLDTTDIILESSGSIVTVVDYNSDRCRLARTEFYSNPRDTSSMDSCFYDKTHDVDLSLTKYLESRPKWSKVRWINVNGLSKTAIYTIGQHYKLHKLAIEDMVDIPQRTKVDEYPLHTFCCLPLHRLIPYKHLTGPRVRYNQFFNFFTKRFGGNNDNFAPQSATARFSTLAAVDSAKLAKSNINYKIKPHFDTLQSRLASTRNMKSMYQWSNPTQLQRSDYLESRRPLASRQKMVGVEQVSLYLTHEGTVISFFEGSGDEIEKPILERLESESTILRESADPSILFQAIIDAIVDLLHPIIAAYRSRLAELELAAILNPSMAHTRDLHLINADLTVLRNSITPVTSLINSLRDRAGNSRKKSDSDKGTSSATGVSSSCTTKPSRASSTRSDYSKISQEACVYLADVADHTLSYTQDLDVMRNNTKSMIDLIFNTISIQSSDAVKLLSLVTVIFLPLSFLTGYFGMNFTGFDALSNGVGYYWGIAVPSSASMTILLMYPWVRDNVRKIHQLIKRSRDHNRRKKQTRRKQKRRQVTVIESV
SIO_010081: AWJ20_167
subclass of: SO_0000673
so part of: AWJ20_167
location: 527434..529569
location: region:527434-529569:1
so has part: feature:527434-529569:1:exon

XP_018734417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527434-529569:1:exon

AWJ20_168
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: UBX5
locus tag: AWJ20_168
so part of: sequence
location: complement(<529766..>531430)
location: region:529766-531430:-1
so has part: feature:529766-531430:-1:exon
subclass of: SO_0000010

30033508
type: Gene
SIO_000068: ncbigene

position:529766:-1
position: 529766
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:531430:-1
position: 531430
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529766-531430:-1:exon

AWJ20_168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: UBX5
locus tag: AWJ20_168
product: Ubx5p
transcript id: XM_018878577.1
SIO_010081: AWJ20_168
subclass of: SO_0000673
so part of: AWJ20_168
location: complement(<529766..>531430)
location: region:529766-531430:-1
so has part: feature:529766-531430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529766-531430:-1:exon

AWJ20_168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: UBX5
locus tag: AWJ20_168
note: UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 21211725]
codon start: 1
product: Ubx5p
translation: MDQDHSDEIAAFCAVTAADPESAQQYLAVADYDLDTAVTLFLEAGGPSIESQHRAASSTNVAGGAGGTGSGAASVHSPDPMDSGINNTNDEDEEAFVQRLQEEEYAQAGNGGGGTGGFGSGNDEVRERIRPVTERLVDPGFGAGFGGFGEADDFLGRMTRNLAMRGVTPRGIFNQGMPSQQIRRRQRGVFDNDEDEEDEDDDSDMEITGSNSFMEETVGSSNLTPHANRLAALFRPPFDLIQDVDLELAKNLGQEEKKWILVDIQNSREFSCQKLNRDLWSNKDVKATVKANFIFLQYSSEDSYGINYLQYYPYQGYPHIAILDPRTGERLRVWSEVPEPLQWIDDVHNFLSRYSLDPSHKNPIAKISRTKTDVQHMTEEEQIEFAVRQSLGVKSNSSSDDDFVSVHSDVMDEDSNDEIEVVEERSAVPESSGSSSRVPQAPDISESEPEDDHDLTEEDIFASILPREIQEPEADPKTTTRIQFRLADGSRIIRRFRLDDSVRTIFAFLKQNVEALSGHHFGLASDRRKLIDLVDETIQSAKLQNSVVLVEILD
SIO_010081: AWJ20_168
subclass of: SO_0000673
so part of: AWJ20_168
location: complement(529766..531430)
location: region:529766-531430:-1
so has part: feature:529766-531430:-1:exon

XP_018734418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529766-531430:-1:exon

AWJ20_169
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TNA1
locus tag: AWJ20_169
so part of: sequence
location: <533331..>534845
location: region:533331-534845:1
so has part: feature:533331-534845:1:exon
subclass of: SO_0000010

30033519
type: Gene
SIO_000068: ncbigene

position:533331:1
position: 533331
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:534845:1
position: 534845
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533331-534845:1:exon

AWJ20_169
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TNA1
locus tag: AWJ20_169
product: Tna1p
transcript id: XM_018878588.1
SIO_010081: AWJ20_169
subclass of: SO_0000673
so part of: AWJ20_169
location: <533331..>534845
location: region:533331-534845:1
so has part: feature:533331-534845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533331-534845:1:exon

AWJ20_169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TNA1
locus tag: AWJ20_169
note: High affinity nicotinic acid plasma membrane permease; responsible for uptake of low levels of nicotinic acid; expression of the gene increases in the absence of extracellular nicotinic acid or para-aminobenzoate (PABA); GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0005887 - integral component of plasma membrane [Evidence ISS] [PMID 9678606]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0015663 - nicotinamide mononucleotide transmembrane transporter activity [Evidence IMP] [PMID 10869563]; GO_process: GO:0015890 - nicotinamide mononucleotide transport [Evidence IEP,IMP] [PMID 10869563]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Tna1p
translation: MVKQETSVVDIEQPQELELATTNVSHEKKGISVEVQEALDYEYTPEEEKRVVRKFDMNILIYLFFLYMLSFLDRGNIGNANTAGMSKDLNMSDSQYQWLLTIFYIFYICFEFMILCYKIFPPRLYVPTIVIGWGITSTCCAAAQKWEHLMGLRALLGIFEASFGPGAILYISFFYYRHEVAAKNAIFLSSAPLATTFSGALAYGITKHNLAIASWRVLFLVEGLPTIVVGAIGYYAIPNGPTTCRFLTEHEKRIAGARMAKQTGRVNMEKTLHFKEMLRAAIDIKVWIPMIMYFSINVPFSSLPVFTPAIIEGMGFTSVNSQGLSALPYIYTFLTMLGAAYLSDRIKRRGIVIAFLALHGAAGYLILALSTTVGARYFALFLAAGGIFPCIALVLSWQSNNQGTESQRATGFVLLQTLGQSGPLVGTRLFPSTDAPLYHKGFWVSFGFCCLLFACACTLMTHLYFENKKLDARYGPIEESDEVEVTSDAYNAEGEFNPRFRYIM
SIO_010081: AWJ20_169
subclass of: SO_0000673
so part of: AWJ20_169
location: 533331..534845
location: region:533331-534845:1
so has part: feature:533331-534845:1:exon

XP_018734419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533331-534845:1:exon

AWJ20_170
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_170
so part of: sequence
location: <535821..>536402
location: region:535821-536402:1
so has part: feature:535821-536402:1:exon
subclass of: SO_0000010

30033531
type: Gene
SIO_000068: ncbigene

position:535821:1
position: 535821
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:536402:1
position: 536402
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535821-536402:1:exon

AWJ20_170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_170
product: AAT-domain-containing protein
transcript id: XM_018878599.1
SIO_010081: AWJ20_170
subclass of: SO_0000673
so part of: AWJ20_170
location: <535821..>536402
location: region:535821-536402:1
so has part: feature:535821-536402:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535821-536402:1:exon

AWJ20_170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_170
inference: similar to AA sequence:KEGG_Orthology:K19200
codon start: 1
product: AAT-domain-containing protein
translation: MTEGGIVGKIGLNEYGVGCCLNAIMAKGVDKNKIPIHLALRLVVSSKSAEEAIETLTKTGCASAGHIFVADSTTARGLEFSAFDYKALDLDGKNHLFHTNHYLAPHNAEEGQTEWVSDSPFRLSRIEELSKSLKPSIEGIQEAFKDEKNSPGSICRIGSSVTLFNIVMDLSAKTAAVTIGRPIDPDSKLTFSF
SIO_010081: AWJ20_170
subclass of: SO_0000673
so part of: AWJ20_170
location: 535821..536402
location: region:535821-536402:1
so has part: feature:535821-536402:1:exon

XP_018734420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535821-536402:1:exon

AWJ20_171
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MRF1
locus tag: AWJ20_171
so part of: sequence
location: complement(<537433..>538800)
location: region:537433-538800:-1
so has part: feature:537433-538800:-1:exon
subclass of: SO_0000010

30033542
type: Gene
SIO_000068: ncbigene

position:537433:-1
position: 537433
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:538800:-1
position: 538800
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537433-538800:-1:exon

AWJ20_171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MRF1
locus tag: AWJ20_171
product: Mrf1p
transcript id: XM_018878610.1
SIO_010081: AWJ20_171
subclass of: SO_0000673
so part of: AWJ20_171
location: complement(<537433..>538800)
location: region:537433-538800:-1
so has part: feature:537433-538800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537433-538800:-1:exon

AWJ20_171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MRF1
locus tag: AWJ20_171
inference: similar to AA sequence:KEGG_Orthology:K02835
note: Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 11502169]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IMP] [PMID 1475194]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 8265342]; GO_function: GO:0003747 - translation release factor activity [Evidence IEA]; GO_function: GO:0003747 - translation release factor activity [Evidence IDA] [PMID 10748224]; GO_function: GO:0003747 - translation release factor activity [Evidence IGI] [PMID 1475194]; GO_function: GO:0016149 - translation release factor activity, codon specific [Evidence IEA]; GO_process: GO:0032543 - mitochondrial translation [Evidence IMP] [PMID 14734569]; GO_process: GO:0070126 - mitochondrial translational termination [Evidence IGI] [PMID 1475194]; GO_process: GO:0070126 - mitochondrial translational termination [Evidence IMP] [PMID 15827612]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006415 - translational termination [Evidence IEA]; GO_process: GO:0006415 - translational termination [Evidence IMP] [PMID 1475194]
codon start: 1
product: Mrf1p
translation: MGPEKCFSAVNGGFETRSLQKGRSLVRHFQTLLGKTRAGLDLNQFRNGWNTTQNREFGVRRCYSTEETPESSTEVEVELLHPLLVQKAEQLKVEYNGLAQEMSSESGSGFDQVKATRMSRLGFVVDLFDQYESMEKEYQELLHLLNDPSLKEEAESELKSVESNLTALTATLQSKLVPTNPFVDKACILELRPGVGGSEAAIFANDLLTMYENYAIKNKWDTRMISITKTPAGNGIVEAIFNINAAGAYERLQYEGGVHRVQRIPETETKGRVHTSTAAVVVLPTEVMEPGADESKAGEEAERTFQANEVRVDVMRARGAGGQHVNTTDSAVRLTHIPSGIVVVIQDERSQHKNKAKAFTILRARLDEIERQEKVREERSKRTAQVTTTERSDKIRTYNYPQNRITDHRCGSTTYKLDDVVKGEINEFNEVVDQMDAFAKTEAMKQLLEDQASSL
SIO_010081: AWJ20_171
subclass of: SO_0000673
so part of: AWJ20_171
location: complement(537433..538800)
location: region:537433-538800:-1
so has part: feature:537433-538800:-1:exon

XP_018734421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537433-538800:-1:exon

AWJ20_172
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_172
so part of: sequence
location: <539360..>539953
location: region:539360-539953:1
so has part: feature:539360-539953:1:exon
subclass of: SO_0000010

30033553
type: Gene
SIO_000068: ncbigene

position:539360:1
position: 539360
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:539953:1
position: 539953
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539360-539953:1:exon

AWJ20_172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_172
product: hypothetical protein
transcript id: XM_018878621.1
SIO_010081: AWJ20_172
subclass of: SO_0000673
so part of: AWJ20_172
location: <539360..>539953
location: region:539360-539953:1
so has part: feature:539360-539953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539360-539953:1:exon

AWJ20_172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_172
codon start: 1
product: hypothetical protein
translation: MAVEQAAKRAVESEAAVLGTSGKSGGSSGGPVDTERELAQLYTRLSIAEEKAKNLETLKSTYEKTTSQLTRRLTEEQAKAQNYRDEVDLKTTSMQHLQDEMLALQIQLNVIEDNMKQVQKENEALVERWMAKVAGEAEKLNDANAFIERYSFTGWRSVPPAAGAPPQTPWLLLRRSLRGEMVANRNSLKRIKPPSEG
SIO_010081: AWJ20_172
subclass of: SO_0000673
so part of: AWJ20_172
location: 539360..539953
location: region:539360-539953:1
so has part: feature:539360-539953:1:exon

XP_018734422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539360-539953:1:exon

AWJ20_173
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DOT1
locus tag: AWJ20_173
so part of: sequence
location: complement(<540086..>541918)
location: region:540086-541918:-1
so has part: feature:540086-541918:-1:exon
subclass of: SO_0000010

30033564
type: Gene
SIO_000068: ncbigene

position:540086:-1
position: 540086
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:541918:-1
position: 541918
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540086-541918:-1:exon

AWJ20_173
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DOT1
locus tag: AWJ20_173
product: histone methyltransferase DOT1
transcript id: XM_018878632.1
SIO_010081: AWJ20_173
subclass of: SO_0000673
so part of: AWJ20_173
location: complement(<540086..>541918)
location: region:540086-541918:-1
so has part: feature:540086-541918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540086-541918:-1:exon

AWJ20_173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DOT1
locus tag: AWJ20_173
inference: similar to AA sequence:KEGG_Orthology:K11427
codon start: 1
product: histone methyltransferase DOT1
translation: MFFSQLSKVSGSASKGHPQNSANVKKTVITTTKVVRKSSSPLAQPAAAASGSHGSGSSSGSGISGGIAGSNVGNNSSKRDRQVKNRHSSEPVASSKRKRVENRSTAGARTGRATAGSSPLATDQNGSTGSTGGSSGVGGRGGDRATSSPKPRKRRTAKSYNTRVSDESSSEEEENWELTLKKPSSASITATQSPSSDLEFEDGQTSRQFYLDPENHSSELAGPVDIISFAQLVTSTSRNVRYKPLFDFKKNTVNNSRNESYKTNEPENEQKDDEKRTITLQLPFGSEEYPVMIPSKVEEANPIDEIAAVFEMTATVFVPGGGENSPSWLIKHPSNQDCILRRLRRAVKNNDSQSFHRSIDEFNDLILSLRESGAIESTIKSIDRLPTPTIYELLNQVYRRVVSPRTHELRDYKAFSSNVYGELLPPFVTEIFRQTKLVPSSVFIDLGSGVGNCVLQAALEIGCESWGCEMMKTASELATKQKTELENRVNKLYRLAMGSINLVSSDFVQDESIHAVLHRADVLLVNNYAFDAELNGQLVNMFLDLKDGCKIVSLRSFVPTGHVITEHNRESPINILRVEKRHFSNDSVSWTTAGGDYYIATIDRSRLTAS
SIO_010081: AWJ20_173
subclass of: SO_0000673
so part of: AWJ20_173
location: complement(540086..541918)
location: region:540086-541918:-1
so has part: feature:540086-541918:-1:exon

XP_018734423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540086-541918:-1:exon

AWJ20_174
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GPI10
locus tag: AWJ20_174
so part of: sequence
location: <542581..>544245
location: region:542581-544245:1
so has part: feature:542581-544245:1:exon
subclass of: SO_0000010

30033575
type: Gene
SIO_000068: ncbigene

position:542581:1
position: 542581
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:544245:1
position: 544245
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542581-544245:1:exon

AWJ20_174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GPI10
locus tag: AWJ20_174
product: Gpi10p
transcript id: XM_018878643.1
SIO_010081: AWJ20_174
subclass of: SO_0000673
so part of: AWJ20_174
location: <542581..>544245
location: region:542581-544245:1
so has part: feature:542581-544245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542581-544245:1:exon

AWJ20_174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GPI10
locus tag: AWJ20_174
inference: similar to AA sequence:KEGG_Orthology:K05286
note: Integral membrane protein involved in GPI anchor synthesis; putative alpha 1,2 mannosyltransferase required for addition of the third mannose onto the glycosylphosphatidylinositol (GPI) core structure; human PIG-Bp is a functional homolog; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016021 - integral component of membrane [Evidence ISS] [PMID 9639537]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004584 - dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity [Evidence IMP] [PMID 9576863]; GO_function: GO:0004584 - dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity [Evidence IMP] [PMID 9639537]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA,IEA]; GO_process: GO:0006506 - GPI anchor biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0006506 - GPI anchor biosynthetic process [Evidence IMP] [PMID 9759715]
codon start: 1
product: Gpi10p
translation: MQYSSRRWIHLPLYAIPLLVAFRVFNALSIKTFFQPDEYWQSLEPAHIAVYGYGYLTWEWREHLRSAAHPLLFAGVYKLANWLDIDPVLGPKLFQGVVAAIGDIYTYELAIQATNTPSASVAKLALFANLASAFNWFCLPRTFSNSLETVLTTIALSYWPWKSFTSGSPIIWPRFVLSLAIASIACIFRPTNALLWLFLGIHFLWTSSSSRQTTVKIIAATSAVLTLSLCFNGLVDYVYFGEPVFPLLNFIKFNIVESLSQFYGVNQWHYYLSQGLPLLTMAYLPLVLTGLYQYKSTIIVQLILFIIGSYSLLAHKEVRFIFPLIPLLHLLVAAALDRIRRRAIFPLPYLVAILLAINVPVATYFSLYHQRGVIDVISYLRHEPTVSSVGFLMPCHSTPWQSHIHRPDITAWFLTCEPPLGLTAKQQKSYLDIADQFYADPTTFLDTHFPPLDDAPTDTPPSHSDYDWPSHLVFFAALEPLASRYLSPVYQEVSSFFPGAGASGGWGSAPDPAAPLAALESFSSTVLAISCEAGATGSGAEPQPPEAPWPPDTV
SIO_010081: AWJ20_174
subclass of: SO_0000673
so part of: AWJ20_174
location: 542581..544245
location: region:542581-544245:1
so has part: feature:542581-544245:1:exon

XP_018734424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542581-544245:1:exon

AWJ20_175
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: UNG1
locus tag: AWJ20_175
so part of: sequence
location: complement(<544341..>545237)
location: region:544341-545237:-1
so has part: feature:544341-545237:-1:exon
subclass of: SO_0000010

30033586
type: Gene
SIO_000068: ncbigene

position:544341:-1
position: 544341
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:545237:-1
position: 545237
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544341-545237:-1:exon

AWJ20_175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: UNG1
locus tag: AWJ20_175
product: Ung1p
transcript id: XM_018878654.1
SIO_010081: AWJ20_175
subclass of: SO_0000673
so part of: AWJ20_175
location: complement(<544341..>545237)
location: region:544341-545237:-1
so has part: feature:544341-545237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544341-545237:-1:exon

AWJ20_175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: UNG1
locus tag: AWJ20_175
inference: similar to AA sequence:KEGG_Orthology:K03648
note: Uracil-DNA glycosylase; required for repair of uracil in DNA formed by spontaneous cytosine deamination; efficiently excises uracil from single-stranded DNA in vivo; not required for strand-specific mismatch repair; cell-cycle regulated, expressed in late G1; localizes to mitochondria and nucleus; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 11812822]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 24034606]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 11812822]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 24034606]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO_function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO_function: GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA,IEA]; GO_function: GO:0004844 - uracil DNA N-glycosylase activity [Evidence IDA] [PMID 2644266]; GO_process: GO:0006281 - DNA repair [Evidence IEA,IEA]; GO_process: GO:0006281 - DNA repair [Evidence IMP] [PMID 1938887]; GO_process: GO:0006284 - base-excision repair [Evidence IEA,IEA]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]
codon start: 1
product: Ung1p
translation: MTFLSPETNRQTVSRAEILTRCRLEITTLDESWLAVLHKELSKPYFLNLKKFIKTEINNGKRIFPPLQDIYSWSRHTPLDSVRVVILGQDPYHGPNQAHGLAFSVNPPTPPPPSLRNIYKGIAIDYPDFVVPKSGLLTPWANRGVLLLNTCLTVQAANANSHAGKGWETFTEEVLKAAVKARPSGICFLAWGNPAYARMQKIRPSSEHLVLRSVHPSPLSASRGFFECNHFRKANEWLFEKYGPAGVVDWALQTGNKLQAIELLLDPAKQQQLKELETLLADDDDEDDDEIPPTTTKN
SIO_010081: AWJ20_175
subclass of: SO_0000673
so part of: AWJ20_175
location: complement(544341..545237)
location: region:544341-545237:-1
so has part: feature:544341-545237:-1:exon

XP_018734425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544341-545237:-1:exon

AWJ20_176
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MSS2
locus tag: AWJ20_176
so part of: sequence
location: complement(<546078..>547541)
location: region:546078-547541:-1
so has part: feature:546078-547541:-1:exon
subclass of: SO_0000010

30033597
type: Gene
SIO_000068: ncbigene

position:546078:-1
position: 546078
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:547541:-1
position: 547541
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546078-547541:-1:exon

AWJ20_176
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MSS2
locus tag: AWJ20_176
product: Mss2p
transcript id: XM_018878663.1
SIO_010081: AWJ20_176
subclass of: SO_0000673
so part of: AWJ20_176
location: complement(<546078..>547541)
location: region:546078-547541:-1
so has part: feature:546078-547541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546078-547541:-1:exon

AWJ20_176
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MSS2
locus tag: AWJ20_176
inference: similar to AA sequence:KEGG_Orthology:K17798
note: Peripherally bound inner membrane protein of the mitochondrial matrix; involved in membrane insertion of C-terminus of Cox2p, interacts genetically and physically with Cox18p; GO_component: GO:0031314 - extrinsic component of mitochondrial inner membrane [Evidence IDA] [PMID 11604502]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IDA] [PMID 11604502]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0032979 - protein insertion into mitochondrial membrane from inner side [Evidence IMP] [PMID 11604502]; GO_process: GO:0032979 - protein insertion into mitochondrial membrane from inner side [Evidence IGI,IPI] [PMID 11950926]; GO_process: GO:0032979 - protein insertion into mitochondrial membrane from inner side [Evidence IPI] [PMID 17452441]
codon start: 1
product: Mss2p
translation: MRISGVLLAEFSLIPKRALRKYLFDFRVPLGYKTVVRVYQSCLDESDPNFLQPSKDVDQVPPYQLMTLKRILENYRKSSGVISKRAVDVENNLVDRASELGDYAAIALLCGRTLASSPGSDQQLTRSTSDTSATSATSSALSGATASTAGSSNITAATSATSSGTSATDSTTASSSGTTSATTPANNTDRTTSGIASSAASSAAPTLPDADSSNASVNADVSTGNGSNTPSNNGASSIVVKESSLPKDEITVEDRQHANLLLRQLMDKKFPLAFKIAGDLAYQRNQREKARQFYQLAIDNGIQSDNSLYVECLRNIGLICLMTKDQIDLVTARRYFDKAVASALDLNQVSDCHFYLGQILEKNQTASRYHLEKAASTGLRQAFAPLGFLLLNYFNKVELAQQWFELGSSIDDINCHTGLFDCLMKLGDYEGAARVLDKIRRDEKGDLVVQSRKKLIEQLEQHRQGPPPGGSGNRNDGADAGSERWSF
SIO_010081: AWJ20_176
subclass of: SO_0000673
so part of: AWJ20_176
location: complement(546078..547541)
location: region:546078-547541:-1
so has part: feature:546078-547541:-1:exon

XP_018734426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546078-547541:-1:exon

AWJ20_177
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SNF2
locus tag: AWJ20_177
so part of: sequence
location: <553718..>558487
location: region:553718-558487:1
so has part: feature:553718-558487:1:exon
subclass of: SO_0000010

30033608
type: Gene
SIO_000068: ncbigene

position:553718:1
position: 553718
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:558487:1
position: 558487
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553718-558487:1:exon

AWJ20_177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SNF2
locus tag: AWJ20_177
product: SWI/SNF catalytic subunit SNF2
transcript id: XM_018878674.1
SIO_010081: AWJ20_177
subclass of: SO_0000673
so part of: AWJ20_177
location: <553718..>558487
location: region:553718-558487:1
so has part: feature:553718-558487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553718-558487:1:exon

AWJ20_177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SNF2
locus tag: AWJ20_177
inference: similar to AA sequence:KEGG_Orthology:K11786
codon start: 1
product: SWI/SNF catalytic subunit SNF2
translation: MGSGPGAGLGQGQGPQGPMRQQPPMPSLGPDSPFNQEQMMLLRNQMIAYRALSKNAPIAQAMQAVQQALASNIRLQLPGQQPQQQQQQQTQQSQQPQQQQPQPQQQPQQQQQPQAQLQAQLGPGAAAQGSPNAAVLNHQRQPSVPVPDEFQNSPGRGFRKPAPSMSQRSFSRASSISSPVATPQTPASGAGTGPATGGTDPLLGVGGVSGQASAGLGNTPSPQPPMPVNLPPSVKLFGVSSYIDPRSPSYLAQSVSFEDYTARQQQLFIPTIMPVGLDVVDMKLERERRVQQAMHNRMAYLEEQESESSSGLSIDEKIELKSLRLANYNKALRGDILANVYYFNMVALDESNKGRYTRMKKLSLQEAIATEQFTYQQRVERQRRENQRKIDNIQSTVKHAVDVANSVTQKRSRLSRLQKSIVSFHAYTEKEEQKRLERTAKQRLQALRANDEEAYIKLLDQTKDTRITHLLRQTNTFLHSLTKAVESQQRENKGLATLNTELPDIQEGDEDSEVRDYYAVAHRIKEEITKQPSILVGGTLKEYQLKGLQWMVSLYNNSLNGILADEMGLGKTIQSISLITYLIEMKQLAGPFLVIVPLSTLTNWNLEFEKWAPSVKKVVYKGPPMARKAQQGIIRSGDFQVLLTTYEYIIKDRPILSRIKWAHMIIDEGHRMKNTQSKLSFTLTTYYSTRYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKMDLSEEETLLIIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVIKCKMSALQQKLYQQMIKYKLLILGDNVQGASASGLKGLNNQIMQLRKICNHPFVFEEVENLVNPNKETNDDLFRAAGKFELLDRILPKFKKTGHRVLIFFQMTQIMDIMEDYLRLRDMQYLRLDGSTKAEDRSDLLKKFNAPDSPYFAFLLSTRAGGLGLNLQTADTVIIYDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEDSVEEHILEKAHRKLEIDGKVIQAGKFDNKSTNEEQEAFLRSLLEAEEAKKGHKDDDDEEMDDEELNEVLARDDNEKEIFREIDRIRAADYGKSGARARLITEDELPDIYKQDVSHLVKPEPMENYGRGTRERKVLHYDDGLTEEQWLEAVDNDDDTIEDAIARKRQRINKRQQNKLRDREEDSADVSSPGTPLAGGDFAVSTPGTNGKRKRGRKARDTTASVSASATGNVGTPTAKDESPASAIILPVRKRAKGRPPKVKETLSPQARRQLTEQMEEIFNFVTTQVKDDDERNRIDLFLERPPKRIYPDYYLLIENPIACDIIRKRINDAYYQSLPQFREDFRLMFRNARTYNEEGSFVVQDANILENMVNTLYYKYIPEAEAIDKAEAERVLQEKLKKEETAKLMKSEVTQTTVSDATTVSGGNAGVTSTSVGESTSKVELMKLPLSSLANEQEPKQVFKASDSESDHDKAHLSPRLKETSSSSTSPLENGSIAGGAIKDSARISPGIHSGNSSDGGSAASQLGPGEDGDDENMDGGDNSLLVSGQQSAVDGSTVQGDEDEDDDALMHDHDGLELDPFGGDFNDYGNDFDNSNLLDRLN
SIO_010081: AWJ20_177
subclass of: SO_0000673
so part of: AWJ20_177
location: 553718..558487
location: region:553718-558487:1
so has part: feature:553718-558487:1:exon

XP_018734427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553718-558487:1:exon

AWJ20_178
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: INO80
locus tag: AWJ20_178
so part of: sequence
location: <564683..>569263
location: region:564683-569263:1
so has part: feature:564683-569263:1:exon
subclass of: SO_0000010

30033619
type: Gene
SIO_000068: ncbigene

position:564683:1
position: 564683
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:569263:1
position: 569263
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564683-569263:1:exon

AWJ20_178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: INO80
locus tag: AWJ20_178
product: chromatin-remodeling ATPase INO80
transcript id: XM_018878685.1
SIO_010081: AWJ20_178
subclass of: SO_0000673
so part of: AWJ20_178
location: <564683..>569263
location: region:564683-569263:1
so has part: feature:564683-569263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564683-569263:1:exon

AWJ20_178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: INO80
locus tag: AWJ20_178
inference: similar to AA sequence:KEGG_Orthology:K11665
note: ATPase and nucleosome spacing factor; subunit of complex containing actin and actin-related proteins that has chromatin remodeling activity and 3' to 5' DNA helicase activity in vitro; promotes nucleosome shifts in the 3 prime direction; has a role in modulating stress gene transcription; GO_component: GO:0031011 - Ino80 complex [Evidence IDA] [PMID 10361278]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0043140 - ATP-dependent 3'-5' DNA helicase activity [Evidence IDA] [PMID 10952318]; GO_function: GO:0016887 - ATPase activity [Evidence IDA] [PMID 10952318]; GO_function: GO:0003677 - DNA binding [Evidence IEA,IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA,IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IDA,IMP] [PMID 10952318]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]; GO_process: GO:0006338 - chromatin remodeling [Evidence IDA] [PMID 10952318]; GO_process: GO:0006338 - chromatin remodeling [Evidence IMP] [PMID 23207916]; GO_process: GO:0006348 - chromatin silencing at telomere [Evidence IMP] [PMID 18258182]; GO_process: GO:0043486 - histone exchange [Evidence IDA] [PMID 21241891]; GO_process: GO:0042766 - nucleosome mobilization [Evidence IMP] [PMID 17681272]; GO_process: GO:0016584 - nucleosome positioning [Evidence IDA] [PMID 21135121]; GO_process: GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IMP] [PMID 17681272]; GO_process: GO:0051983 - regulation of chromosome segregation [Evidence IMP] [P…
codon start: 1
product: chromatin-remodeling ATPase INO80
translation: MAISSLLSGSEESGAGGGAVGSVGGPGSSSVGDIASGGFGSVASSDGGFAVSSSDKSGLDRYTYNGTSHVKSSMNGFGAFKVNKWYNQPNYQMHFDWPTSLADNDAGEIAKQAAEPRYSSEKSEFLSSVRSKLENRMNQYHEKTKVEKRTEAHNTLLAKHSSRAKLLVNYANAELHTRALSHVLSGEESVYLEERQRMKRLEANSKRRDQRRLQKQRMALAEKADKIARGEIEAPEGEEQRIASLIASTKRKPGPKPKKEREEYEMLLDELELATTPDSQGAPETPATGKGKSKSKTKGKSLSSTGTGSTATPKSHKRKSTDTGGDDQTPSDKKTKLANGSAAVSAAAGTPKTKGEKAAERAAEKAAAKAAKDAAKQAEKAAKEEQKAADKAAAAAAAAAAEQTKGPSQKEIKAVARLYQNTYESIWKDMARRDSGKVYRLMQSSTNMKLSNVKKTAMLAAKEARRWQLKTNKSAKDIPARARRGMREMLTFWKRNEKEERDLRRKAEKEAIEQAKKDEELRESKRQAKKLNFLITQTELYSHFIGRKIKTAEAAGEEVNQDDDPHGIKQLESGDSAGRVEDIDFDNTDDNEIKRIAMNNAQKAVMDAQTKARNFNNSAEIKNVDIDDDDMNFQNPTSLGDEVIAQPKMLSCQLKEYQLKGLTWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQEISKFVPQFKALPYWGSGKDRKVLRKFWDRKQVTYTKDSPFHVLITSYQLVVADAQYFQRFKWQYMILDEAQAIKSSSSTRWKSLLSFRCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHEEFSEWFSKDIESHAQNNSQLNEQQLKRLHMILKPFMLRRVKKHVQQELGDKIEIDVYCNLTSRQRVLYKMLRSQISLMDLIERATSSSDDGTQSLMNLVMQFRKVCNHPDLFERADVKSAFNFATFAQTVNVNRDGPVIDVAYTAVNHISYSVPKLAYRDGGFLDIPSQGNYRVGFNQKYLKNKFSVWDPSNILESSADPNGAFTWSRFVGKSAGEIAKLSQQGVYERAIAGYSIAEKIHHEALVQQIYDEQEPDNSYVPGSKLFLIDDRYGHVEQLKSRASLGDGPLHELLSIADNVEIDNYYHVSEKAYDSRVLCPPISLVGSDMGLVNDQQSTLFNLSVRSTLDPLTLDQEWDLLQHGVKPGDFPASNLYPKERNTRAGYTSIRMPSMAKFVYESGKLLKLDQLLTELKANDHRVLIYFQMTKMMDLMEEYLTYRQYKYCRLDGSSKLSDRRDLVNDWQTRPDLFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVKGTIEERMRDRAKQKMHVQAVVMEGGGAAGSGVDFQKPGREVAFWLLDDDDAVDAALRQKEREKQLSEIKTSKKSRKSAGTGTGTGSNGTPAPIAAPVPRKQITLEDMYHEDEGNFDESSRPATGATTPVARGETPPVFKPKKRMTTEQRLRAVGDIA
SIO_010081: AWJ20_178
subclass of: SO_0000673
so part of: AWJ20_178
location: 564683..569263
location: region:564683-569263:1
so has part: feature:564683-569263:1:exon

XP_018734428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564683-569263:1:exon

AWJ20_179
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NPP1
locus tag: AWJ20_179
so part of: sequence
location: <570091..>572439
location: region:570091-572439:1
so has part: feature:570091-572439:1:exon
subclass of: SO_0000010

30033630
type: Gene
SIO_000068: ncbigene

position:570091:1
position: 570091
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:572439:1
position: 572439
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570091-572439:1:exon

AWJ20_179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NPP1
locus tag: AWJ20_179
product: Npp1p
transcript id: XM_018878695.1
SIO_010081: AWJ20_179
subclass of: SO_0000673
so part of: AWJ20_179
location: <570091..>572439
location: region:570091-572439:1
so has part: feature:570091-572439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570091-572439:1:exon

AWJ20_179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NPP1
locus tag: AWJ20_179
note: Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp2p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; NPP1 has a paralog, NPP2, that arose from the whole genome duplication, and an npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to the single mutants; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_function: GO:0035529 - NADH pyrophosphatase activity [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA,IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IGI,IMP] [PMID 16278456]; GO_function: GO:0047429 - nucleoside-triphosphate diphosphatase activity [Evidence IDA,IGI,IMP] [PMID 16278456]; GO_function: GO:0004551 - nucleotide diphosphatase activity [Evidence IEA]; GO_function: GO:0004551 - nucleotide diphosphatase activity [Evidence ISS] [PMID 16278456]; GO_function: GO:0004528 - phosphodiesterase I activity [Evidence IEA]; GO_function: GO:0004528 - phosphodiesterase I activity [Evidence ISS] [PMID 16278456]; GO_process: GO:0016036 - cellular response to phosphate starvation [Evidence IEP,IMP] [PMID 16278456]; GO_process: GO:0008152 - metabolic process [Evidence IEA,IEA]; GO_process: GO:0090305 - nucleic acid phosphodiester bond hydrolysis [Evidence IEA]; GO_process: GO:0009141 - nucleoside triphosphate metabolic process [Evidence IMP] [PMID 16278456]; GO_process: GO:0006796 - phosphate-containing compound metabolic process [Evidence ISS] [PMID 16278456]
codon start: 1
product: Npp1p
translation: MASGYSLDIPRESLDGDDESDIVASGGPVTDRDRDLLRADDEVLKALAGSSSSKSRTTPNIKSLLPKKKFLSFATPKKSSRPSPGGDYASLGDGSFKDEDDGFDIDSDDNDNLQGTGSSSSGGGRNGNPGKPKRSFFGGHKLDTFRREGDISNADSDFSSEDDFDIEIDVETQPGKRKKRRSRNSQMTGRKHLLVFLLIILGFGLLYSIHGSDDDEDTQKSGGSKKPKYKKLVKSLQSNGTHEFYPTTVVISLDGFHPHYVSEELTPNLHSLFVDHSGVPYMIPSFPSSTFPNHWTLVTGLYPANHGIIGNTFFDTKTGKQFFNTKPGQSLQREWWGGEPIWETAALQGVSTAVHMWPGSEVDWEDVAPVAVDKFNKSEPLTSKTNRVFQWLDNGNYEQRPELILTYVPNVDTVGHQVGISGPEIRATLQEVDSFVGSILSGIKSRNLDSIVNVMVLSDHGMAPTSNDRIVFLEDLMDTNSIEHLDGWPLVGLRLKNPTSSNSQKGGGSLDDAVNKNIDSKESTKSLEQTIQSTYQSLKSKEDPSKFKVFLKDNMPREWNFGGMNSQYSSRIAPLWLVPQVGWSITTRKQLEDMGGRYQPFGVHGYNNTESLMRALFLATGPYFSQDQMFHPIPNVDVYNIICDTLNLVPAHTDGAPVRRALESLPSKWVDPQPYPGVEFHTEILKVNSTYDILFGGSGGSNQYKVKEPSKSSSATNPSSTSSTATGPASTSSLPENSEKPSFFGKVTDWWNSISTATSDALSSAKDWVSSKFSSADKGESR
SIO_010081: AWJ20_179
subclass of: SO_0000673
so part of: AWJ20_179
location: 570091..572439
location: region:570091-572439:1
so has part: feature:570091-572439:1:exon

XP_018734429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570091-572439:1:exon

AWJ20_180
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_180
so part of: sequence
location: complement(<572597..>574318)
location: region:572597-574318:-1
so has part: feature:572597-574318:-1:exon
subclass of: SO_0000010

30033642
type: Gene
SIO_000068: ncbigene

position:572597:-1
position: 572597
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:574318:-1
position: 574318
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572597-574318:-1:exon

AWJ20_180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_180
product: putative indolepyruvate decarboxylase family protein
transcript id: XM_018878707.1
SIO_010081: AWJ20_180
subclass of: SO_0000673
so part of: AWJ20_180
location: complement(<572597..>574318)
location: region:572597-574318:-1
so has part: feature:572597-574318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572597-574318:-1:exon

AWJ20_180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_180
inference: similar to AA sequence:KEGG_Orthology:K12261
note: hypothetical protein with low sequence identity to Pdc1p; mRNA identified as translated by ribosome profiling data; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0008152 - metabolic process [Evidence IEA,IEA]
codon start: 1
product: putative indolepyruvate decarboxylase family protein
translation: MSVISGSEIIANSLVQLGVTHIFGIVGIPVIEVAEACINRGIKFISFRNEQAATYAATAYGYLTGKPGVSLVVGGPGVVHAMAGIENANSNHFPLLLLAGSSETHQRGKGAFQELNQVALLYPHTKFANQPSTVKSVPYMIEKAYRTSYFGRPGSTYIDLPADIIQAKLDIKNHQSKESVVQKLVPPGLAPKTMGDPERIRRAVNVLKTAKSPLLIVGKGAAYGRAENIIRQFQERTNIPFLPTPMGKGVIPDDNSLNVSAARSAALKNADVILLLGARLNWILHYGDSPKFSDNVKIIQVDSAAEELGNNSGNPELGIAGDIELVVHQILNELTSHGNSSWRSPPLLKEIADTKASNQAKAEKVDSTVTDPIKYQAVYKTIRETFSETLPSSKEIIYVSEGANTMDISRSSFSLNSPRTRLDAGTNATMGVGLGYAIAAKAASPDSLVVAIEGDSAFGFSAVEVETAVRSQLPMIIYVMNNSGVYHGVDPTAYDNVDDKPLPSTALQLNTAYHTLAESLGAKGYLAKTLDEVRSATLEAIRSDNVSVINVIIDSGKDKKLEFGWMASTKPKL
SIO_010081: AWJ20_180
subclass of: SO_0000673
so part of: AWJ20_180
location: complement(572597..574318)
location: region:572597-574318:-1
so has part: feature:572597-574318:-1:exon

XP_018734430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572597-574318:-1:exon

AWJ20_181
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BET3
locus tag: AWJ20_181
so part of: sequence
location: complement(<575899..>576312)
location: region:575899-576312:-1
so has part: feature:575899-576312:-1:exon
subclass of: SO_0000010

30033653
type: Gene
SIO_000068: ncbigene

position:575899:-1
position: 575899
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:576312:-1
position: 576312
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575899-576312:-1:exon

AWJ20_181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BET3
locus tag: AWJ20_181
product: TRAPP complex core subunit BET3
transcript id: XM_018878717.1
SIO_010081: AWJ20_181
subclass of: SO_0000673
so part of: AWJ20_181
location: complement(<575899..>576312)
location: region:575899-576312:-1
so has part: feature:575899-576312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575899-576312:-1:exon

AWJ20_181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BET3
locus tag: AWJ20_181
note: Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); hydrophilic homodimeric protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Golgi transport vesicles; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA,IEA]; GO_component: GO:1990070 - TRAPPI protein complex [Evidence IDA] [PMID 11239471]; GO_component: GO:1990071 - TRAPPII protein complex [Evidence IDA] [PMID 11239471]; GO_component: GO:1990072 - TRAPPIII protein complex [Evidence IDA] [PMID 20375281]; GO_component: GO:0033106 - cis-Golgi network membrane [Evidence IDA] [PMID 9564032]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA,IEA]; GO_component: GO:0000407 - pre-autophagosomal structure [Evidence IEA]; GO_function: GO:0017112 - Rab guanyl-nucleotide exchange factor activity [Evidence IGI] [PMID 11102533]; GO_function: GO:0017112 - Rab guanyl-nucleotide exchange factor activity [Evidence IGI] [PMID 17041589]; GO_function: GO:0017112 - Rab guanyl-nucleotide exchange factor activity [Evidence IDA] [PMID 17110339]; GO_function: GO:0017112 - Rab guanyl-nucleotide exchange factor activity [Evidence IMP] [PMID 17287728]; GO_function: GO:0017112 - Rab guanyl-nucleotide exchange factor activity [Evidence IGI] [PMID 8590804]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IMP] [PMID 11239471]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IGI,IMP] [PMID 8590804]; GO_process: GO:0006914 - autophagy [Evidence IEA]; GO_process: GO:0006891 - intra-Golgi vesicle-mediated transport [Evidence IMP] [PMID 11239471]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]
codon start: 1
product: TRAPP complex core subunit BET3
translation: MGYNIGLRLIEEFLAKSGTGRCRELKETAEIISKVGFKMFLNITPTIDNWTADFKQFSLIFDENPLAEFVELPDDGRAHRELWYSNLLAGVIRGALEMVQLQVETEFVSDTLQGSDYTELRVKFIKTLEDEIPPGED
SIO_010081: AWJ20_181
subclass of: SO_0000673
so part of: AWJ20_181
location: complement(575899..576312)
location: region:575899-576312:-1
so has part: feature:575899-576312:-1:exon

XP_018734431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575899-576312:-1:exon

AWJ20_182
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ERG12
locus tag: AWJ20_182
so part of: sequence
location: <576947..>578164
location: region:576947-578164:1
so has part: feature:576947-578164:1:exon
subclass of: SO_0000010

30033664
type: Gene
SIO_000068: ncbigene

position:576947:1
position: 576947
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:578164:1
position: 578164
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576947-578164:1:exon

AWJ20_182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ERG12
locus tag: AWJ20_182
product: mevalonate kinase
transcript id: XM_018878728.1
SIO_010081: AWJ20_182
subclass of: SO_0000673
so part of: AWJ20_182
location: <576947..>578164
location: region:576947-578164:1
so has part: feature:576947-578164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576947-578164:1:exon

AWJ20_182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ERG12
locus tag: AWJ20_182
inference: similar to AA sequence:KEGG_Orthology:K00869
note: Mevalonate kinase; acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0016301 - kinase activity [Evidence IEA,IEA]; GO_function: GO:0004496 - mevalonate kinase activity [Evidence IEA,IEA]; GO_function: GO:0004496 - mevalonate kinase activity [Evidence IDA] [PMID 16477420]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0006696 - ergosterol biosynthetic process [Evidence IMP] [PMID 200835]; GO_process: GO:0010142 - farnesyl diphosphate biosynthetic process, mevalonate pathway [Evidence IMP] [PMID 200835]; GO_process: GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO_process: GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IMP] [PMID 200835]; GO_process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0016310 - phosphorylation [Evidence IEA]; GO_process: GO:0006694 - steroid biosynthetic process [Evidence IEA]; GO_process: GO:0008202 - steroid metabolic process [Evidence IEA]; GO_process: GO:0016126 - sterol biosynthetic process [Evidence IEA]
codon start: 1
product: mevalonate kinase
translation: MKNFIVSAPGKVILFGEHAVVHNKPAIAAAVSLRTYTGVEDLADTSKIELDFADIKFDHQWAIEDLPWNELSASRSSESAIPTSLDQHVVDILNETALKGITNTFQHAAAFAFIYLYMSICSRDTPGKKFTTRSTLPVGAGLGSSACLSVCLSSALLRVAGQITNPEPTPSEEFIDLINNWAFIGECCIHGNPSGIDNTVATRGGAVKFRRPNIMEPIANFPPVKLVLTNTGYPRRTSELVANVGKLRKNLPTVVEPILDAIEHVSEEAYKILNSGQSSSAIAANLGSLVHINHALLVALGVSHPALEQTKYVADSLKLGETKLTGAGGGGCAITLVTEDVSKEEVHSKVAQLREKLPAEFQIFDTILGGPGVGYTEDYPQAVADKFASMENDDFEKLSWSYWSS
SIO_010081: AWJ20_182
subclass of: SO_0000673
so part of: AWJ20_182
location: 576947..578164
location: region:576947-578164:1
so has part: feature:576947-578164:1:exon

XP_018734432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576947-578164:1:exon

AWJ20_183
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FSF1
locus tag: AWJ20_183
so part of: sequence
location: complement(<578378..>579361)
location: region:578378-579361:-1
so has part: feature:578378-579361:-1:exon
subclass of: SO_0000010

30033675
type: Gene
SIO_000068: ncbigene

position:578378:-1
position: 578378
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:579361:-1
position: 579361
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578378-579361:-1:exon

AWJ20_183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FSF1
locus tag: AWJ20_183
product: Fsf1p
transcript id: XM_018878738.1
SIO_010081: AWJ20_183
subclass of: SO_0000673
so part of: AWJ20_183
location: complement(<578378..>579361)
location: region:578378-579361:-1
so has part: feature:578378-579361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578378-579361:-1:exon

AWJ20_183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FSF1
locus tag: AWJ20_183
note: Putative protein; predicted to be an alpha-isopropylmalate carrier; belongs to the sideroblastic-associated protein family; non-tagged protein is detected in purified mitochondria; likely to play a role in iron homeostasis; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0031966 - mitochondrial membrane [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0006812 - cation transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0055072 - iron ion homeostasis [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Fsf1p
translation: MASSVPGNRPLPESRYDLSTYMGRVRHCAEVSDPRMLFNTSKDIELARKLIGDYKNSDGPMTPELWRAKRVLDSTLHPDTGLPVVLPFRMSSYVLSNLVVTVGMLTPGLGTAGTLFWQIANQSLNVAVNTANANKSHPLSTQQLITNYLLAVSGSCSVALGLNAIVPRLKNVSASTKTILSRLVPFAAVVSAGIVNVFLMRGEEIRKGITVHDPETNEPVGTSKTAAKYAVGETALSRVITATPIMVFPPLILYRLQRGILRGKSNLAVTAANLGLITITSFAVLPFALGVFPTKRVKSTTQLEPELSNLKNSKGTPVSEVWFNRGM
SIO_010081: AWJ20_183
subclass of: SO_0000673
so part of: AWJ20_183
location: complement(578378..579361)
location: region:578378-579361:-1
so has part: feature:578378-579361:-1:exon

XP_018734433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578378-579361:-1:exon

AWJ20_184
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GUA1
locus tag: AWJ20_184
so part of: sequence
location: complement(<580465..>582048)
location: region:580465-582048:-1
so has part: feature:580465-582048:-1:exon
subclass of: SO_0000010

30033686
type: Gene
SIO_000068: ncbigene

position:580465:-1
position: 580465
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:582048:-1
position: 582048
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580465-582048:-1:exon

AWJ20_184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GUA1
locus tag: AWJ20_184
product: GMP synthase (glutamine-hydrolyzing)
transcript id: XM_018878749.1
SIO_010081: AWJ20_184
subclass of: SO_0000673
so part of: AWJ20_184
location: complement(<580465..>582048)
location: region:580465-582048:-1
so has part: feature:580465-582048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580465-582048:-1:exon

AWJ20_184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GUA1
locus tag: AWJ20_184
inference: similar to AA sequence:KEGG_Orthology:K01951
note: GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA,IEA]; GO_function: GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IMP,ISS] [PMID 8112582]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016462 - pyrophosphatase activity [Evidence IEA]; GO_process: GO:0006177 - GMP biosynthetic process [Evidence IEA,IEA,IEA]; GO_process: GO:0006177 - GMP biosynthetic process [Evidence IMP] [PMID 20980241]; GO_process: GO:0006541 - glutamine metabolic process [Evidence IEA]; GO_process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA,IEA]
codon start: 1
product: GMP synthase (glutamine-hydrolyzing)
translation: MSSEPVVEVSAVFDTILVLDFGSQYSHLITRRLREFNVYAEMLPCTQKISELTWKPKGVILSGGPYSVYDKDAPHVDHDVFKLDVPILGICYGMQELAWINGRGVARGEHREYGHATIHVKDSDNKLFHGIDNFQVWMSHGDKLNDLPTGFKTIATTDNSPYAAIAHEKENIWGIQFHPEVTHTTKGKQLLRNFAIDICQADQKWNMKNFIHTEIERIRTLVGEHGEVIGAVSGGVDSTVAAKLMKEAIGDRFHAILVDNGVMRLNECAEVKKTLSDGLGINLTVIDAADEFLSKLKGVTDPEKKRKIIGNTFIHIFEREAARIQPKAGGEIEYLLQGTLYPDVIESISFKGPSQTIKTHHNVGGLLEDMKLKLIEPLRELFKDEVRALGELMGIPHDLVWRHPFPGPGIAIRILGEVTPEQIKIARHADHIYIEEIKKAGIYDKISQAFACLLPVKSVGVMGDQRTYEQVIALRAIETSDFMTADWYIFDAAFLKNVAKRIVNEVDGVARVVYDITSKPPATVEWE
SIO_010081: AWJ20_184
subclass of: SO_0000673
so part of: AWJ20_184
location: complement(580465..582048)
location: region:580465-582048:-1
so has part: feature:580465-582048:-1:exon

XP_018734434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580465-582048:-1:exon

AWJ20_185
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RAM2
locus tag: AWJ20_185
so part of: sequence
location: <582904..>583980
location: region:582904-583980:1
so has part: feature:582904-583980:1:exon
subclass of: SO_0000010

30033697
type: Gene
SIO_000068: ncbigene

position:582904:1
position: 582904
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:583980:1
position: 583980
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582904-583980:1:exon

AWJ20_185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RAM2
locus tag: AWJ20_185
product: bifunctional protein farnesyltransferase/protein geranylgeranyltransferase
transcript id: XM_018878760.1
SIO_010081: AWJ20_185
subclass of: SO_0000673
so part of: AWJ20_185
location: <582904..>583980
location: region:582904-583980:1
so has part: feature:582904-583980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582904-583980:1:exon

AWJ20_185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RAM2
locus tag: AWJ20_185
inference: similar to AA sequence:KEGG_Orthology:K05955
note: Alpha subunit of farnesyltransferase and geranylgeranyltransferase-I; farnesyltransferase (RAM2-RAM1 heterodimer) catalyzes the addition of 15-carbon isoprenoid farnesyl to substrate proteins containing a CAAX consensus motif; type I geranylgeranyltransferase (RAM2-CDC43 heterodimer) catalyzes the addition of the 20-carbon isoprenoid geranylgeranyl to substrate proteins containing a CaaL consensus motif; required for membrane localization of Ras proteins and a-factor; GO_component: GO:0005953 - CAAX-protein geranylgeranyltransferase complex [Evidence IDA] [PMID 1400380]; GO_component: GO:0005965 - protein farnesyltransferase complex [Evidence IDA] [PMID 1763050]; GO_function: GO:0004662 - CAAX-protein geranylgeranyltransferase activity [Evidence IEA]; GO_function: GO:0004662 - CAAX-protein geranylgeranyltransferase activity [Evidence IDA] [PMID 1400380]; GO_function: GO:0004659 - prenyltransferase activity [Evidence IEA]; GO_function: GO:0004660 - protein farnesyltransferase activity [Evidence IEA]; GO_function: GO:0004660 - protein farnesyltransferase activity [Evidence IDA] [PMID 1763050]; GO_function: GO:0004661 - protein geranylgeranyltransferase activity [Evidence IDA] [PMID 2034682]; GO_function: GO:0008318 - protein prenyltransferase activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0007323 - peptide pheromone maturation [Evidence IDA] [PMID 1763050]; GO_process: GO:0018343 - protein farnesylation [Evidence IDA] [PMID 1763050]; GO_process: GO:0018344 - protein geranylgeranylation [Evidence IDA] [PMID 1400380]; GO_process: GO:0018342 - protein prenylation [Evidence IEA]
codon start: 1
product: bifunctional protein farnesyltransferase/protein geranylgeranyltransferase
translation: MATTYDWSDLKAIPQNDGGKPLAPISYNAEYVAAMNLLRGVMAVEEYSERALALTAEVIEMNPAHYTVWEYRSRILKSIGKDIVPKDKRLVPDGDEDFDIVDFADWLNATSLDNPKNYQVWNYRQLLEPVRSDNPESKIFYLMELELVRDVISDDTKNFHAWSHLKWVVNRVSERYEESGGSSTISKADSDDKAQEKTAEESDFTEVFSLKGQLKFSDLFIEEDVYNNSAWSYRYFVHSQWGILSKVELAASEERFNEEINYVKERIALAPQNEAVWTYLVGIYDKYDHDAHPLDELESLCIQYAAADHIESSHALELLLRIYEQRQDKAKASAALDTLEKLLPMRSGYWEYKRRSLG
SIO_010081: AWJ20_185
subclass of: SO_0000673
so part of: AWJ20_185
location: 582904..583980
location: region:582904-583980:1
so has part: feature:582904-583980:1:exon

XP_018734435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582904-583980:1:exon

AWJ20_186
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CHA1
locus tag: AWJ20_186
so part of: sequence
location: complement(<584733..>585803)
location: region:584733-585803:-1
so has part: feature:584733-585803:-1:exon
subclass of: SO_0000010

30033708
type: Gene
SIO_000068: ncbigene

position:584733:-1
position: 584733
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:585803:-1
position: 585803
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584733-585803:-1:exon

AWJ20_186
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CHA1
locus tag: AWJ20_186
product: L-serine/L-threonine ammonia-lyase CHA1
transcript id: XM_018878771.1
SIO_010081: AWJ20_186
subclass of: SO_0000673
so part of: AWJ20_186
location: complement(<584733..>585803)
location: region:584733-585803:-1
so has part: feature:584733-585803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584733-585803:-1:exon

AWJ20_186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CHA1
locus tag: AWJ20_186
inference: similar to AA sequence:KEGG_Orthology:K17989
note: Catabolic L-serine (L-threonine) deaminase; catalyzes the degradation of both L-serine and L-threonine; required to use serine or threonine as the sole nitrogen source, transcriptionally induced by serine and threonine; GO_component: GO:0042645 - mitochondrial nucleoid [Evidence IDA] [PMID 15692048]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]; GO_function: GO:0003941 - L-serine ammonia-lyase activity [Evidence IDA] [PMID 7042346]; GO_function: GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]; GO_function: GO:0004794 - L-threonine ammonia-lyase activity [Evidence IDA] [PMID 7042346]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO_process: GO:0006565 - L-serine catabolic process [Evidence IGI] [PMID 7042346]; GO_process: GO:0006520 - cellular amino acid metabolic process [Evidence IEA]; GO_process: GO:0006567 - threonine catabolic process [Evidence IGI] [PMID 7042346]
codon start: 1
product: L-serine/L-threonine ammonia-lyase CHA1
translation: MSIICENMTPTPTVLPSSELERPNPLPLPYIETPLIPSLYLSERVGCSVYLKLEQVQPSGSFKSRGLGNLVYETIRSSPFGSQFHFFSSSGGNAGCATAYAAKLYKQKCTVCVPISTPVAMVERIRRAGANVVVHGKYIADSDKYLREELIPSSDLPAVYCHPYDNELVWEGNSTLASEIVSQMSILGQKKPSAVICSVGGGGMFNGLVQGFQKANWQDVPILAVETEGCATLNKSIKSGGQQVRVEHPSTIARSLSTVSVTRETIDYAMHKHPTHSMTVSDAEAATACIEFANDHKLLIEAACGTALAPLYTNRIHEVVPGLSADSVLVVVVCGGTAVNWEILEQYSKEYGVPLY
SIO_010081: AWJ20_186
subclass of: SO_0000673
so part of: AWJ20_186
location: complement(584733..585803)
location: region:584733-585803:-1
so has part: feature:584733-585803:-1:exon

XP_018734436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584733-585803:-1:exon

AWJ20_187
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NOG1
locus tag: AWJ20_187
so part of: sequence
location: complement(<587294..>589237)
location: region:587294-589237:-1
so has part: feature:587294-589237:-1:exon
subclass of: SO_0000010

30033719
type: Gene
SIO_000068: ncbigene

position:587294:-1
position: 587294
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:589237:-1
position: 589237
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587294-589237:-1:exon

AWJ20_187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NOG1
locus tag: AWJ20_187
product: Nog1p
transcript id: XM_018878782.1
SIO_010081: AWJ20_187
subclass of: SO_0000673
so part of: AWJ20_187
location: complement(<587294..>589237)
location: region:587294-589237:-1
so has part: feature:587294-589237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587294-589237:-1:exon

AWJ20_187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NOG1
locus tag: AWJ20_187
inference: similar to AA sequence:KEGG_Orthology:K06943
note: Putative GTPase; associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; member of the ODN family of nucleolar G-proteins; GO_component: GO:0005730 - nucleolus [Evidence IEA,IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 11112701]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 11583614]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 16861225]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 17443350]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 23212245]; GO_function: GO:0005525 - GTP binding [Evidence IEA,IEA]; GO_function: GO:0005525 - GTP binding [Evidence ISS] [PMID 11112701]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:1902626 - assembly of large subunit precursor of preribosome [Evidence IMP] [PMID 22735702]; GO_process: GO:0006364 - rRNA processing [Evidence IMP] [PMID 12773575]; GO_process: GO:0042273 - ribosomal large subunit biogenesis [Evidence IDA] [PMID 16888624]; GO_process: GO:0042273 - ribosomal large subunit biogenesis [Evidence IMP] [PMID 17443350]; GO_process: GO:0000054 - ribosomal subunit export from nucleus [Evidence IMP,IPI] [PMID 12773575]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]
codon start: 1
product: Nog1p
translation: MQLTWKDIPTIPNANEFLDVVLNRTQRKTPTVIRAGFKITRIRAFYMRKVRYTADGFSEKLQQIVDSFPNINEIHPFHRDLLDTLYEKNHYKVSLAAVSRAKSLVEQVSRDYVRLLKFGQSLFQCKQLKRAAMGRMATIVKRLKDALLYLEQVRQHLGRLPSIDPNTRTLLICGYPNVGKSSFLKSITRADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHIRSCVLYFMDLSEQCGFSVADQVKLFHSIKPLFANKSVMVVINKIDLVKPQDLDEEKQALLKSMTATDGSMTVEILQASCHTEEGIMDVRNKACDKLLTARIEQKMKSSSRINSILNKIHVARPSPRDDVPVARDPFVPAGALERATSYDPEDPNRRRLQKDIEIENGGAGVFQPDYKDAYILEDEAWKHDIIPELLDGKNVYDFIDPEISAKLQALEEEEEKLEQQGFYDSDDDDMDNSEDEEIAAKAEWIRNKHKLMLNAARSKRTIKNRGGVIPRKLAKRTLSQMETHFDNIGVDASAVSTRARALAARAETATGQDVVMNQQEGPVIDTARIPKRDQSDRRYDGVGASKRSKAERLAKLDQRDRNRAARAGEGDRHTTASIPKHLFSGKRGMGKTQRR
SIO_010081: AWJ20_187
subclass of: SO_0000673
so part of: AWJ20_187
location: complement(587294..589237)
location: region:587294-589237:-1
so has part: feature:587294-589237:-1:exon

XP_018734437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587294-589237:-1:exon

AWJ20_188
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_188
so part of: sequence
location: <591808..>592320
location: region:591808-592320:1
so has part: feature:591808-592320:1:exon
subclass of: SO_0000010

30033730
type: Gene
SIO_000068: ncbigene

position:591808:1
position: 591808
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:592320:1
position: 592320
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591808-592320:1:exon

AWJ20_188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_188
product: hypothetical protein
transcript id: XM_018878792.1
SIO_010081: AWJ20_188
subclass of: SO_0000673
so part of: AWJ20_188
location: <591808..>592320
location: region:591808-592320:1
so has part: feature:591808-592320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:591808-592320:1:exon

AWJ20_188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_188
codon start: 1
product: hypothetical protein
translation: MSINWVTVENGSPLELPGERFQFQKFGAAIELWHPRPVPGQTATTRISSNRGTIYVSNKRVVFHPQSPHNFTVVGRGDREFRSFACDLAKMYQCQLVQPWFGANYWQADIVPTKVNGGLEPDSDLWKLKIVFKEGGVFDFTEAVSKAQAEARHLQQDGLDEALPAYSELS
SIO_010081: AWJ20_188
subclass of: SO_0000673
so part of: AWJ20_188
location: 591808..592320
location: region:591808-592320:1
so has part: feature:591808-592320:1:exon

XP_018734438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591808-592320:1:exon

AWJ20_189
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CMR3
locus tag: AWJ20_189
so part of: sequence
location: complement(<592836..>594251)
location: region:592836-594251:-1
so has part: feature:592836-594251:-1:exon
subclass of: SO_0000010

30033741
type: Gene
SIO_000068: ncbigene

position:592836:-1
position: 592836
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:594251:-1
position: 594251
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592836-594251:-1:exon

AWJ20_189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CMR3
locus tag: AWJ20_189
product: Cmr3p
transcript id: XM_018878803.1
SIO_010081: AWJ20_189
subclass of: SO_0000673
so part of: AWJ20_189
location: complement(<592836..>594251)
location: region:592836-594251:-1
so has part: feature:592836-594251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:592836-594251:-1:exon

AWJ20_189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CMR3
locus tag: AWJ20_189
note: Putative zinc finger protein; YPR013C is not an essential gene; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0003677 - DNA binding [Evidence IDA] [PMID 23012409]; GO_function: GO:0046872 - metal ion binding [Evidence IEA,IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19158363]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Cmr3p
translation: MIAASLQEMPVGNSRYSSEGYNNYQVSAAAAGGNNNGHQAGMLMGGGTGGAVTGMTTTTHNSSNHSSPTTTNSSMSSYPMPQLHQSSNGIPKLEPQSASVGYSQSTTTADHAAASAAAAAAANSDPNYYYYSSQQHQQQQAHLGRLSTESLDHLGQSYSRNQSIPSLPPPSYNRPMSSLPSVSGGVDESTQQAVSASSDSNNISRTSQGLHTHDHNTPSPTQHQQPSLQHQQSLLPQQQQQQHQQPLQQQQQPQQQIPTTQQQQQFHQTAMSGIPQPQLPALYQQPYPPLYQQPQQPQPGSSTGGYGDLTPQQQRSLSIGQPMTQPIGHPLSHHPMYMQQQPPIPGGTGTAPLPNLSSIPLGAYTTNASGQVVSTTPGPTNIIPGPAGTGTTSGPPSHLMTTFNSKISLRSLKKHACSVCGKRFTRPSSLQTHMYSHTGEKPFKCEYEGCGRSFSVVSNLRRHKKIHGIYP
SIO_010081: AWJ20_189
subclass of: SO_0000673
so part of: AWJ20_189
location: complement(592836..594251)
location: region:592836-594251:-1
so has part: feature:592836-594251:-1:exon

XP_018734439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592836-594251:-1:exon

AWJ20_190
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_190
so part of: sequence
location: <599111..>600202
location: region:599111-600202:1
so has part: feature:599111-600202:1:exon
subclass of: SO_0000010

30033753
type: Gene
SIO_000068: ncbigene

position:599111:1
position: 599111
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:600202:1
position: 600202
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599111-600202:1:exon

AWJ20_190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_190
product: histone N-acetyltransferase (predicted)
transcript id: XM_018878814.1
SIO_010081: AWJ20_190
subclass of: SO_0000673
so part of: AWJ20_190
location: <599111..>600202
location: region:599111-600202:1
so has part: feature:599111-600202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599111-600202:1:exon

AWJ20_190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_190
codon start: 1
product: histone N-acetyltransferase (predicted)
translation: MTLNLESVTSDAADADSAAAAVTAAVTGPVTSVTPVTPVTPVRADLPTKGSTDIQSDPESGFSAAAAAAAAAATSAADTNTGAEVDAETEAGGDTGTDSNPKSNDKLSPKIISETNAKSNVNSSLQTSSRATSTTDPITPLPLPVTDHLNGGQNGDAGPAAVNPNGGTASQTPATAAAAAAELISAQLLTNEDFIACYNMVRKLRGLYIASGLGWNAKDKKAEMRYTPGMQFLVIRSPATSTPITSSPVTPNTDTAPAVTAFASFVLDDHLNEDGTGDRVTYLYELHVSPTNQGSGYGRQLINEIRRLSTLKTGSPLPIALTVINANHKARAFYRHLGFTPIANDDEPPAKRSRTGWHQLRLE
SIO_010081: AWJ20_190
subclass of: SO_0000673
so part of: AWJ20_190
location: 599111..600202
location: region:599111-600202:1
so has part: feature:599111-600202:1:exon

XP_018734440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599111-600202:1:exon

AWJ20_191
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MNN9
locus tag: AWJ20_191
so part of: sequence
location: <607793..>608863
location: region:607793-608863:1
so has part: feature:607793-608863:1:exon
subclass of: SO_0000010

30033763
type: Gene
SIO_000068: ncbigene

position:607793:1
position: 607793
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:608863:1
position: 608863
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607793-608863:1:exon

AWJ20_191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MNN9
locus tag: AWJ20_191
product: mannosyltransferase complex subunit MNN9
transcript id: XM_018878823.1
SIO_010081: AWJ20_191
subclass of: SO_0000673
so part of: AWJ20_191
location: <607793..>608863
location: region:607793-608863:1
so has part: feature:607793-608863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607793-608863:1:exon

AWJ20_191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MNN9
locus tag: AWJ20_191
inference: similar to AA sequence:KEGG_Orthology:K05529
note: Subunit of Golgi mannosyltransferase complex; this complex mediates elongation of the polysaccharide mannan backbone; forms a separate complex with Van1p that is also involved in backbone elongation; this complex also contains Anp1p, Mnn10p, Mnn11p, and Hoc1p; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA]; GO_component: GO:0000139 - Golgi membrane [Evidence IEA]; GO_component: GO:0000136 - alpha-1,6-mannosyltransferase complex [Evidence IPI] [PMID 9430634]; GO_component: GO:0005801 - cis-Golgi network [Evidence IDA] [PMID 9430634]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0000009 - alpha-1,6-mannosyltransferase activity [Evidence IDA] [PMID 19249370]; GO_function: GO:0000009 - alpha-1,6-mannosyltransferase activity [Evidence IDA] [PMID 9430634]; GO_process: GO:0006487 - protein N-linked glycosylation [Evidence IDA] [PMID 19249370]; GO_process: GO:0006487 - protein N-linked glycosylation [Evidence IDA] [PMID 9430634]; GO_process: GO:0006486 - protein glycosylation [Evidence IEA]
codon start: 1
product: mannosyltransferase complex subunit MNN9
translation: MATVGPVRRPASVLIIVISLLAVVYLLFSPFSQPSTSVSAIPRVIQQNNAGKGTTAEKYIKNHKMNSLAATAKSADNNEKVLILTPLARFYPEYWENLLKLTYPRKLVELGFIVPRSSQGDEVLKSLNKAVNKVQSSSKKDERFAKITILRQDTESLDSQSEKDRHALSVQKKRRAQMSLARNSLLFTTIDADTSWVLWLDSDIVESPPTLIQDLARHDKDLIVANCFQRYTTDDGKPDIRPYDFNSWQESDTARELMSKMGDDEIILEGYAEMATYRVLMAHIYNAKDDIHTELPLDGVGGTALLVKADVHRDGAMFPPFPFYHLMETEGFAKMAKRLGYQAFGLPNYLVYHYNE
SIO_010081: AWJ20_191
subclass of: SO_0000673
so part of: AWJ20_191
location: 607793..608863
location: region:607793-608863:1
so has part: feature:607793-608863:1:exon

XP_018734441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607793-608863:1:exon

AWJ20_192
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: EMP24
locus tag: AWJ20_192
so part of: sequence
location: <610869..>611369
location: region:610869-611369:1
so has part: feature:610869-611369:1:exon
subclass of: SO_0000010

30033774
type: Gene
SIO_000068: ncbigene

position:610869:1
position: 610869
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:611369:1
position: 611369
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610869-611369:1:exon

AWJ20_192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: EMP24
locus tag: AWJ20_192
product: Emp24p
transcript id: XM_018878834.1
SIO_010081: AWJ20_192
subclass of: SO_0000673
so part of: AWJ20_192
location: <610869..>611369
location: region:610869-611369:1
so has part: feature:610869-611369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610869-611369:1:exon

AWJ20_192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: EMP24
locus tag: AWJ20_192
note: Component of the p24 complex; role in misfolded protein quality control; binds to GPI anchor proteins and mediates their efficient transport from the ER to the Golgi; integral membrane protein that associates with endoplasmic reticulum-derived COPII-coated vesicles; GO_component: GO:0030134 - ER to Golgi transport vesicle [Evidence IDA] [PMID 11157978]; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA]; GO_component: GO:0000139 - Golgi membrane [Evidence IEA]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 8862519]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISS] [PMID 8862519]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IPI] [PMID 11157978]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IMP] [PMID 8862519]; GO_process: GO:0006621 - protein retention in ER lumen [Evidence IMP] [PMID 8862519]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA,IEA]; GO_process: GO:0016050 - vesicle organization [Evidence IGI,IMP] [PMID 8862519]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]
codon start: 1
product: Emp24p
translation: MRKGDQLAISFQVGDRDPSSSNQLEVDFWITDPHKNQIRSLHRVADGDASVEITESGRYEYCFSNEFSHVGTKDVTFHIHGIVYVDNDNPSPDSLDSQVKILSRLVQEVKNEQGYLVIRERTHRNTAESTNSRVKWWSLFQIIVVAVNSLFQIYYLKRFFEVKTNV
SIO_010081: AWJ20_192
subclass of: SO_0000673
so part of: AWJ20_192
location: 610869..611369
location: region:610869-611369:1
so has part: feature:610869-611369:1:exon

XP_018734442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610869-611369:1:exon

AWJ20_193
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: THI73
locus tag: AWJ20_193
so part of: sequence
location: complement(<619707..>621299)
location: region:619707-621299:-1
so has part: feature:619707-621299:-1:exon
subclass of: SO_0000010

30033785
type: Gene
SIO_000068: ncbigene

position:619707:-1
position: 619707
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:621299:-1
position: 621299
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619707-621299:-1:exon

AWJ20_193
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: THI73
locus tag: AWJ20_193
product: Thi73p
transcript id: XM_018878845.1
SIO_010081: AWJ20_193
subclass of: SO_0000673
so part of: AWJ20_193
location: complement(<619707..>621299)
location: region:619707-621299:-1
so has part: feature:619707-621299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619707-621299:-1:exon

AWJ20_193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: THI73
locus tag: AWJ20_193
note: Putative plasma membrane permease; proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 16850348]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISS] [PMID 10869563]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_function: GO:0005215 - transporter activity [Evidence ISS] [PMID 10869563]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence ISS] [PMID 10869563]
codon start: 1
product: Thi73p
translation: MSSKGIQVETVEDVEAHRIETIDGTAPPAGVDKALRVLKAADGPVHISDEDDKRLLRKIDLHILPIMLFGYMLQQLDKSSLSYTSVFGLAKDANLKGNEYSNLGSAIYWLQVAAQPTTAYALVKLPPAKFMGINILCWGVVLCCSAIAKNYTGLLICRILMGAFEATIAPTYVALVAMWWRRAEQSNRNAAWYCMNGVAAMFGSLIAYGLGHIQSKLHSYQIIFLFTGCLTIVFSIVILLFLPDSPLTARFLTEQERIMVIERLRHNQMGIETNVWKWEQVLETALDLKTYVWMLLLFCVSVVSGGISTFGPLIIQEFGFTSFQTILLNIPSGFVQIMIVLIAGFVATRMKLKSPILMFAILGSLVGCIMIRFIDRTPSHRGVLLFAYYLLQFFTAITPMTYSWATQNTAGETKKKCTNAAIFLGQYAGNIVGPLLYSSKQAPLYRTGLTINMCMFAALVGLIVMAVLTLKVLNRKHAATRVSMGKSAQINDLSMAVHNYNVDDAGEAYDVDNAFRDLTDKKNEDFIYVF
SIO_010081: AWJ20_193
subclass of: SO_0000673
so part of: AWJ20_193
location: complement(619707..621299)
location: region:619707-621299:-1
so has part: feature:619707-621299:-1:exon

XP_018734443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619707-621299:-1:exon

AWJ20_194
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: EPL1
locus tag: AWJ20_194
so part of: sequence
location: <625900..>628782
location: region:625900-628782:1
so has part: feature:625900-628782:1:exon
subclass of: SO_0000010

30033796
type: Gene
SIO_000068: ncbigene

position:625900:1
position: 625900
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:628782:1
position: 628782
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625900-628782:1:exon

AWJ20_194
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: EPL1
locus tag: AWJ20_194
product: Epl1p
transcript id: XM_018878856.1
SIO_010081: AWJ20_194
subclass of: SO_0000673
so part of: AWJ20_194
location: <625900..>628782
location: region:625900-628782:1
so has part: feature:625900-628782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625900-628782:1:exon

AWJ20_194
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: EPL1
locus tag: AWJ20_194
inference: similar to AA sequence:KEGG_Orthology:K11322
note: Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex; conserved region at N-terminus is essential for interaction with the NPC (nucleosome core particle); required for autophagy; homologous to Drosophila Enhancer of Polycomb; coding sequence contains length polymorphisms in different strains; GO_component: GO:0035267 - NuA4 histone acetyltransferase complex [Evidence IEA]; GO_component: GO:0035267 - NuA4 histone acetyltransferase complex [Evidence IDA] [PMID 10911987]; GO_component: GO:0035267 - NuA4 histone acetyltransferase complex [Evidence IPI] [PMID 15485911]; GO_component: GO:0032777 - Piccolo NuA4 histone acetyltransferase complex [Evidence IEA]; GO_component: GO:0032777 - Piccolo NuA4 histone acetyltransferase complex [Evidence IDA] [PMID 12782659]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0004402 - histone acetyltransferase activity [Evidence IDA] [PMID 10911987]; GO_function: GO:0004402 - histone acetyltransferase activity [Evidence IDA] [PMID 17274630]; GO_process: GO:0006281 - DNA repair [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IDA] [PMID 15610740]; GO_process: GO:0006281 - DNA repair [Evidence IDA] [PMID 16135807]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0016573 - histone acetylation [Evidence IDA] [PMID 10911987]; GO_process: GO:0016239 - positive regulation of macroautophagy [Evidence IMP] [PMID 22539722]; GO_process: GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA] [PMID 10911987]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Epl1p
translation: MPTSTPAARFRQRKISVKQTLAVVKQTDIPDLEDEQQRELQQIETGVEKAEESEHHLKEVMNAHAAATSGAKVAQVYIPTPDASKKWSEFAKFYKGKFTPPAVYIRTSATVEDTEGCPYSMDEEDDAFLQKMNEEAIAESKKASSTGSDSKASSPNICTPDEFEMICHKFESVVSEKQPFLSTAPNSLLSLEELSETIIEQITQAENDPSSPEFLLRNMSASALASPGAGMYTPLYRKGPRPLVKSFQLFSAKIYPHYRERKIARGGKSVFPTLKFEDNSEKDDSDPYVCFRRREVRQVRKTRRTDMQSSERLRRLQAEMEAARELVELVVKREQLRKEALMSELNIFEHRVKVKTLKRTLGIKGDDEDLVAHKKKKVEEKKVGKDGKPLRKSTGTGLGGEKGSSAAAVAAANASTGSGAGTTGSSKAGSGTGSSSAPATVIIGPDGVITSTAPNGVNQVVPPNVRLPASKIPDMDLLSIEQVLREKEMAIRNAVKSKLKTRAQQDREWVNYTDNPFVPYCDYFDPGLERQMSEHGRIMDAKHSAYSSIASSYPPSTDMLLKLPLAASLGSSYSSRVEVSPVVMRTALNPETGDLELIAKAGEKDMNASGSFQVPRFSSTSLRKRIGRGGRIMVDRRGLVARPVSLNDDVLDKNTDDVEGQRLVDRYKYDSENHADNMEFACSDPCRLNGISDATQSIRFGGMLLSKAYETYREAYQQRQQQLLNLQQKLIQQQQLQLQQQQQQRQQQIQQRQQQRLQQQQAQQAQQQAQQQQQQQQGANLTPEQIQLRQRQLQQMQQQMQQQQLNGGGAVTGASANGASQATGQPQSQAQFQASQAQLAAAAAAAGRTTPLIRPPPSATMGVNGVPKLPPTTQAGGQQLTPQQQQQANIALLKQQQAAKLAAQQRTQAQIQAQAQAQQAKSAPTPPPRSPSTNSPSSSTASATPTPNRVVPVRKVEANV
SIO_010081: AWJ20_194
subclass of: SO_0000673
so part of: AWJ20_194
location: 625900..628782
location: region:625900-628782:1
so has part: feature:625900-628782:1:exon

XP_018734444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625900-628782:1:exon

AWJ20_195
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CAM1
locus tag: AWJ20_195
so part of: sequence
location: <630824..>631774
location: region:630824-631774:1
so has part: feature:630824-631774:1:exon
subclass of: SO_0000010

30033807
type: Gene
SIO_000068: ncbigene

position:630824:1
position: 630824
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:631774:1
position: 631774
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630824-631774:1:exon

AWJ20_195
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CAM1
locus tag: AWJ20_195
product: Cam1p
transcript id: XM_018878867.1
SIO_010081: AWJ20_195
subclass of: SO_0000673
so part of: AWJ20_195
location: <630824..>631774
location: region:630824-631774:1
so has part: feature:630824-631774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630824-631774:1:exon

AWJ20_195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CAM1
locus tag: AWJ20_195
inference: similar to AA sequence:KEGG_Orthology:K03233
note: Nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other nuclear factors; binds calcium and phospholipids; has similarity to translational cofactor EF-1 gamma; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005853 - eukaryotic translation elongation factor 1 complex [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 12824466]; GO_function: GO:0005509 - calcium ion binding [Evidence IDA] [PMID 8465602]; GO_function: GO:0005543 - phospholipid binding [Evidence IDA] [PMID 8465602]; GO_function: GO:0003713 - transcription coactivator activity [Evidence IMP] [PMID 12824466]; GO_function: GO:0003746 - translation elongation factor activity [Evidence IEA,IEA]; GO_process: GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IMP] [PMID 12824466]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IGI] [PMID 8041634]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006414 - translational elongation [Evidence IEA,IEA,IEA]
codon start: 1
product: Cam1p
translation: MSFVNAHIIVSAAAAFRPLLGIDPYNKKNVDTALENLASFTAILESHLVKNTYLVGERVTVADIYAAGGIVSAFKNLFGAEWRKSHPAITRWFTTLLHTPYYAKDYANFEFIAEPVKYTPPKKEEKPKQEKKKEEAKPKAAADDEEDEAPKEKKAAHPLAALGNPKVPIDNWKRVYSNEDTREKALPWFFENYDAADYSLWKVAYKYNDELTLTFMSNNLIGGFFNRLSASTKYLFGAAVVYGENNNNGIVGAFLVRGQDYAPAFDVAPDWESYEYTKLDISKPEDKELLGDLWAWDKPLVINGEKREIADGKVFK
SIO_010081: AWJ20_195
subclass of: SO_0000673
so part of: AWJ20_195
location: 630824..631774
location: region:630824-631774:1
so has part: feature:630824-631774:1:exon

XP_018734445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:630824-631774:1:exon

AWJ20_196
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_196
so part of: sequence
location: complement(<632487..>634517)
location: region:632487-634517:-1
so has part: feature:632487-634517:-1:exon
subclass of: SO_0000010

30033818
type: Gene
SIO_000068: ncbigene

position:632487:-1
position: 632487
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:634517:-1
position: 634517
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632487-634517:-1:exon

AWJ20_196
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_196
product: hypothetical protein
transcript id: XM_018878878.1
SIO_010081: AWJ20_196
subclass of: SO_0000673
so part of: AWJ20_196
location: complement(<632487..>634517)
location: region:632487-634517:-1
so has part: feature:632487-634517:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632487-634517:-1:exon

AWJ20_196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_196
codon start: 1
product: hypothetical protein
translation: MDIVDQAPCKYFQKGNCKFGLKCALAHITPDGRRVNRPSQNQHSHQHQNQNQNQNHSQNQNQGQNHNQNQNQSQNLGQNQSHGQNQAVNGSLASNGSVHGQHHQQHQQTQHQQSQPLALSQTQQQQQQQQQQQQLLQNSVHTQSPLSQAVSSSPGAAAFGSSASSSFHNRTWSYSHSNSGTSIPTTSGLSLALGSHNSTNNSSSTGLASGLASGLNSSLNSGLNSGLSSGLGSGSLGNGSAGNNSYSFGLATGSLISAASSAIPPSSPYSKSANPFSTTLGTSSGGGGAIPGGGMAAASYSNHINSMLGNNTPNSNINSATNNSLRSMSASSTTLWTDRPFIRSLRTSSFLFADNDSAIADDFEDHPAYRNIHGNSVSAIDDDDEEEDDNEGQKAGKKDNDANDVNEKAEDDDDEDARTIYDRRYSNNHDDDEAIADDDPFEEEFVPSSLKDLLTPRERKRRGSRVASSSGSAIASAAPGTPSSTGITGTTSTTSNVLLTPTGTSASIAATQPIASSLSQSHKAIDIWASPRYPRQSFSESTGSPLKVLQPIGTPERTSHFQTPLGSVSSSIGDVASASLSRSLHQSYQSHMLSPPPPRRDHTPVLTGLAGLPNQSNNPGYPSSSSTSTATAGPATAGSSSLFDDDLEDTQFVMEQEDERLDHHSTRLQNLRLMDP
SIO_010081: AWJ20_196
subclass of: SO_0000673
so part of: AWJ20_196
location: complement(632487..634517)
location: region:632487-634517:-1
so has part: feature:632487-634517:-1:exon

XP_018734446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:632487-634517:-1:exon

AWJ20_197
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: LTE1
locus tag: AWJ20_197
so part of: sequence
location: complement(<637237..>640779)
location: region:637237-640779:-1
so has part: feature:637237-640779:-1:exon
subclass of: SO_0000010

30033829
type: Gene
SIO_000068: ncbigene

position:637237:-1
position: 637237
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:640779:-1
position: 640779
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637237-640779:-1:exon

AWJ20_197
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: LTE1
locus tag: AWJ20_197
product: mitotic regulator LTE1
transcript id: XM_018878889.1
SIO_010081: AWJ20_197
subclass of: SO_0000673
so part of: AWJ20_197
location: complement(<637237..>640779)
location: region:637237-640779:-1
so has part: feature:637237-640779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:637237-640779:-1:exon

AWJ20_197
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: LTE1
locus tag: AWJ20_197
inference: similar to AA sequence:KEGG_Orthology:K06681
codon start: 1
product: mitotic regulator LTE1
translation: MSEDEDPYSSSPIVASRRHGSRDLVDGGNAMSPLQTPKKTPNKRSSDNETGYLASPFSVRNHATGNYRSGENHGKSSNIELPFVFDKFPMHMFDDISFIPGRDDARISRFNETTKSLVSATIPRLVVQLTSHDVLDYNFMSDFFLSYRIFMSSDELLECLFTRLIWAINLHTTKTTSSTASDKQDSEIGRDVSVRVFVVLRHWILNFFPDDFLVSFRLRSKFSSTLNKLYSWNTVQEEVQFKRIVEQLKKAWIRVCCMYWQLGSPLNNSNFDVSLPIFPGGTYGQINASRKHSTSTHQDKSTAIRRSTLLSFYKGPIRPAISNSDLKGADGISSDQTAQDTMSAMLNIDKTLRNGALVNGGIILSADVEVKSIKPPTPVRVVQKNHEERGNEGDCERKPANLTIPPPNYKPTLKSVMDSWRVKYKSSNRVLSLFSNIMAPRKPAVVEADSRESSKSFSDIRIDILSARVIEELDYFLKIKSEKQLGHGLGLMRNTRLAAKQSVTNQGEQVTSPSKVHRLSSSSESPTKRQRVHDRESVDLYSVSDTQDDERDQSSGILGDRFPIDKFVNQSLSSKRTSMIDSLRIQDRLGNTSSSSIALSDHFQETDEPFEFSDSLSSLTSSGGEGSLLSFDSYDSALSNQTVMATDKSAAELDENQLGLRRLRRWRNHENLRDITNFRTDGRTSMISGSANISGRVTALRSRNTSHASHGSKTSDKSEKMMLPYSGVDSEVAARLAAIPDDTPDEDAINAALLKLEGKYVRKRKNLSPEDDIFNFERTTAKTNGLIETTPSNTNTNRHTNTNSQILHAPIITHSESEFGNKITIQYTESHNSNLFKAAFESKADIAALASSPSPSTQSPVFSTPTRHQPFANSTPKERISRDQSQTQTQQDRSTVFSIPYSPEHPLSVSNIVTQGNHTPFILNFGSDELCAQFTLIERDALAEIDWKDLIEMRWTRTVVPIQSWLEFLVERDSRGVELVIARFNLMVNWIKSEILLTRQLDERAQTISRFIHIGHQARTLQNFATVMQIVLALQSAVISKLKTTWEHVTENDRELLRQMTELTSPLKNFSKLRSQLNQLEPTKGCVPFVGMYLSDLTFNAERPSFVDTDADHGTDNSTKLVNFDKFQTASSVVKSLLQCIEWSTNYKLHPDHDLVAKCLYIQSLTVEEMDMCLDHLIDP
SIO_010081: AWJ20_197
subclass of: SO_0000673
so part of: AWJ20_197
location: complement(637237..640779)
location: region:637237-640779:-1
so has part: feature:637237-640779:-1:exon

XP_018734447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637237-640779:-1:exon

AWJ20_198
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_198
so part of: sequence
location: complement(<643165..>644724)
location: region:643165-644724:-1
so has part: feature:643165-644724:-1:exon
subclass of: SO_0000010

30033840
type: Gene
SIO_000068: ncbigene

position:643165:-1
position: 643165
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:644724:-1
position: 644724
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643165-644724:-1:exon

AWJ20_198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_198
product: hypothetical protein
transcript id: XM_018878900.1
SIO_010081: AWJ20_198
subclass of: SO_0000673
so part of: AWJ20_198
location: complement(<643165..>644724)
location: region:643165-644724:-1
so has part: feature:643165-644724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643165-644724:-1:exon

AWJ20_198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_198
codon start: 1
product: hypothetical protein
translation: MAKRVEALDEVVDGVLNPPPDRNKRKIILNAFVMNTPTHHNFGQWRNPADKTPLSDQDWNTIDYWVNIAKVCEKGKFHALFIADTLGAYDIYNGPDNFKPSVRSGAQFPVNDPLLLVPALSYATESIGFGVTASTTYDHPYELARRFSTADHLSNGRVGWNIVTSYLESAAKNHGLHTQVEHDERYQIADEYLEVVYKLWEGSWHDKAVTKDVERNVYADPEKVRAINHKGKYFKVPGPHITAPSKQRTPFLFQAGLSVAGKNFGAKHAEGIFVTGDTPALVRKSVDDLRKKAQALGRDPYSLKTILGITVITAATDEEAQAKADEYTKYIDKEAILVFISGGSGFDLGPYSDDFDLRDSENLGLANYIKKKAIGLNQENEKWTKWKLAESYGLGNGSPVIIGGPETVTDKLLDWVDEGDVDGFNLKNLLLPGSYEDFIEYVVPELQKRNRFWTDYDVPKGSIRENVYGTPGNSKLRHDHPAYVKYNWETGTAFHANGTELTHKSEGGDLKRKYEDVEE
SIO_010081: AWJ20_198
subclass of: SO_0000673
so part of: AWJ20_198
location: complement(643165..644724)
location: region:643165-644724:-1
so has part: feature:643165-644724:-1:exon

XP_018734448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:643165-644724:-1:exon

AWJ20_199
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BUD6
locus tag: AWJ20_199
so part of: sequence
location: <646449..>649100
location: region:646449-649100:1
so has part: feature:646449-649100:1:exon
subclass of: SO_0000010

30033851
type: Gene
SIO_000068: ncbigene

position:646449:1
position: 646449
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:649100:1
position: 649100
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646449-649100:1:exon

AWJ20_199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BUD6
locus tag: AWJ20_199
product: Bud6p
transcript id: XM_018878911.1
SIO_010081: AWJ20_199
subclass of: SO_0000673
so part of: AWJ20_199
location: <646449..>649100
location: region:646449-649100:1
so has part: feature:646449-649100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646449-649100:1:exon

AWJ20_199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BUD6
locus tag: AWJ20_199
note: Actin- and formin-interacting protein; participates in actin cable assembly and organization as a nucleation-promoting factor (NPF) for formins Bni1p and Bnr1p; a triple helical coiled-coil domain in the C-terminal region interacts with Bni1p; involved in polarized cell growth; isolated as bipolar budding mutant; potential Cdc28p substrate; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 11071900]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 23671312]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 9247651]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 11071900]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 23671312]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 9247651]; GO_component: GO:0000131 - incipient cellular bud site [Evidence IDA] [PMID 11071900]; GO_component: GO:0000131 - incipient cellular bud site [Evidence IDA] [PMID 9247651]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 9082982]; GO_component: GO:0000133 - polarisome [Evidence IDA] [PMID 9632790]; GO_component: GO:0005628 - prospore membrane [Evidence IDA] [PMID 24390141]; GO_component: GO:0005816 - spindle pole body [Evidence IDA] [PMID 17416900]; GO_function: GO:0003779 - actin binding [Evidence IDA] [PMID 7719850]; GO_function: GO:0003779 - actin binding [Evidence IDA] [PMID 9247651]; GO_function: GO:0005519 - cytoskeletal regulatory protein binding [Evidence IPI] [PMID 15923184]; GO_function: GO:0005519 - cytoskeletal regulatory protein binding [Evidence IDA] [PMID 9082982]; GO_function: GO:0008047 - enzyme activator activity [Evidence IMP] [PMID 23671312]; GO_process: GO:0051017 - actin filament bundle assembly [Evidence IGI,IMP] [PMID 23671312]; GO_process: GO:0030953 - astral microtubule organization [Evidence IMP] [PMID 22608510]; GO_process: GO:0007121 - bipolar cellular…
codon start: 1
product: Bud6p
translation: MLRVILEKALSDDASHENLDKYLPDIREIIVTLLQKLKQKQALIRASGSSVGSAPSIPLPTYHHNSTSHPQPPTHGRYQQTHQGPGPQPQQQSQPHSHQHANPGPPPSPRLQMQGQMSQISAPMKYPTRSESLSSPASPLASTMLPPRHNSVGGHSGAGPRTSSAPDSVKLGGGVPGFQARPPPPPPGGPNGPNGPGPVPGPGGIHIKKNNSRSNLSNISITASNAPRSDYQRGPPSSSPRKESSNPLATLQRSEALERRASRRFSAYQFAKLTNGPQAAREAVPEMPPLPSDKRSSLLPTTSSHSSSMADYTLSTSVVDKTNDQQHLAATIKDTTPSGELAAQKESPSTQSRISSSPQVNGSQEQFPGTIPVFLQIGHKVKKAMVDPSDITIASLRLQFIEKFAYSPGSEAFPDIYIQDPKSGIRYELDETSLDEVKKGSVLVSLNIKEMDEVKKHFSEGLAKLAETVNNLHSKIDDNTSAINQLKETKVNSIATTSSQTQSRSETPMSTRPTSKISLKQVEAIRKDVAVLRQVSASSLGGLKDELAGILTKAKALQNTSFLIQQSGSSRAFMEQCHKKLSAESDSLLTNVDDLQDVIEALRKDVAQRGVRHTPRQLETVAKELAVAKEDLEKMTEYITNERPSWKKIWERELDVVCEEQQFFKLQEELVADLRDDLSKAEETFKLVEMCSQEQSKVSGGRRPTQPTILSAPVDGIVHVKDAVLSEVSALQPNHEQRVEAIERAEKMRRKELELRSKGGEFEEELEEFVGENKLKKSGGVEETERRLKLREQKMLEEQRKNDAEAKLIRDQERERRKLERQKERGKREPIPEDDVPLDAVDTANPVVEPEVNTTPPEEHEVVTNATAEHASEPVEASVESLD
SIO_010081: AWJ20_199
subclass of: SO_0000673
so part of: AWJ20_199
location: 646449..649100
location: region:646449-649100:1
so has part: feature:646449-649100:1:exon

XP_018734449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:646449-649100:1:exon

AWJ20_200
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: EST2
locus tag: AWJ20_200
so part of: sequence
location: complement(<649389..>652592)
location: region:649389-652592:-1
so has part: feature:649389-652592:-1:exon
subclass of: SO_0000010

30033864
type: Gene
SIO_000068: ncbigene

position:649389:-1
position: 649389
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:652592:-1
position: 652592
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649389-652592:-1:exon

AWJ20_200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: EST2
locus tag: AWJ20_200
product: Est2p
transcript id: XM_018878924.1
SIO_010081: AWJ20_200
subclass of: SO_0000673
so part of: AWJ20_200
location: complement(<649389..>652592)
location: region:649389-652592:-1
so has part: feature:649389-652592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:649389-652592:-1:exon

AWJ20_200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: EST2
locus tag: AWJ20_200
inference: similar to AA sequence:KEGG_Orthology:K11126
note: Reverse transcriptase subunit of the telomerase holoenzyme; essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function; mutations in human homolog are associated with aplastic anemia; GO_component: GO:0005694 - chromosome [Evidence IEA]; GO_component: GO:0000781 - chromosome, telomeric region [Evidence IEA,IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 12101098]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 12101098]; GO_component: GO:0000333 - telomerase catalytic core complex [Evidence IDA,IPI] [PMID 15813705]; GO_component: GO:0005697 - telomerase holoenzyme complex [Evidence IDA,IPI] [PMID 10898986]; GO_function: GO:0003677 - DNA binding [Evidence IEA,IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA,IEA,IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO_function: GO:0003720 - telomerase activity [Evidence IDA] [PMID 15813705]; GO_function: GO:0042162 - telomeric DNA binding [Evidence IDA] [PMID 17656141]; GO_function: GO:0003721 - telomeric template RNA reverse transcriptase activity [Evidence IEA]; GO_function: GO:0003721 - telomeric template RNA reverse transcriptase activity [Evidence TAS] [PMID 11884619]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0006278 - RNA-dependent DNA replication [Evidence IEA]; GO_process: GO:0001302 - replicative cell aging [Evidence IGI] [PMID 18627461]; GO_process: GO:0007004 - telomere maintenance via telomerase [Evidence IDA,IMP] [PMID 15813705]; GO_process: GO:0007004 - telomere maintenance via telomerase [Evidence IMP] [PMID 8978029]
codon start: 1
product: Est2p
translation: MSSGELTALSQVYKSVTPLDQFLETFLDPGQIDELYKPTIGNCDFRKFLESVYVGVDFELNADSPPSYPTSIHAQRFRERYLSYKELISFATRNAYQQSLQYTRTLDISESWKGTFSNVLSHGVTSTLKLSYDYPNATAMMFMQHEWRLLYSRLDSAWLYYLLTQCSLFYYLEHCESYIQLTGVNVIYKLRDTLRSDGVGKRSSDGDVGAQRPKKKAKTAGESISLVSNPLQSISTAHVLKQGSSRKKPIRTMLTKASKVFISKESCLYGPTPKNDVCFGFKRNFCLNRVPFREPGLDTQSPVKSSSDRSLSFHVRYLLALIFPSQYGLEGISKLTGPSETNKWQKLNWKAETLRINNLVQTHLESKKRHKTRLLKTNATGKPVTPSIAHILQSSLSRHRHLPYAVFMDESFRIEHLKTAGTIDATKVEIEGSNSSALSVPYHRVSKFIILVINYLFPKETFGSDYNWSLLYKKIGQYVRQRTSEKLSLLVYFEGFRIKDIPWLAPANGTGATSLARPDFEKRQDLFLEFLLWTFDSLIPNLVKANFYVSEISGQTSVSYYRQDVWKIIYHKTVTRYIQEKLHCAPSDAHIQVAHRPYTGYSGLRIVPKPTGFRVIITLGKAPTEGTAVLKSVNSYLSILKKVLDSSRILYHKTLPSHLSNPNEMFERLASFYKNCESPMKDNSSFYFVKADITRCFDTIPVSKAFEIAKSIIKGEHFWLQKVQSYNLRIKGRYKYREELIARDLSAPMSFQANVSNAYCRKSSARSRILVDRGGDETVPGQKMVDLLEQHLNRCVVRLEENNYWLREGIPQGSCISSLLCDLVYDAFVQKCLPYNEKTSIMFRYVDDFLFVSRAKGEAERFLGLMVKGFSEFGVSINPRKTITNFESALPTEVMRTGHFPFLSHQIDCYTLRPVNKRDFIRQTLVKTPLYRMPKSNISVLTEKIMRIINFRVNAKIIKELQISRLLRKYISNVCSNIASTVLTYDRICLQRLSAKQSSKPIASLLLDVVVRISSVVGESASSENRHGKNFTELEILKSCLQGFNKVFRNKPRYASILDDLYRTLKI
SIO_010081: AWJ20_200
subclass of: SO_0000673
so part of: AWJ20_200
location: complement(649389..652592)
location: region:649389-652592:-1
so has part: feature:649389-652592:-1:exon

XP_018734450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:649389-652592:-1:exon

AWJ20_201
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SFH1
locus tag: AWJ20_201
so part of: sequence
location: <652819..>653895
location: region:652819-653895:1
so has part: feature:652819-653895:1:exon
subclass of: SO_0000010

30033875
type: Gene
SIO_000068: ncbigene

position:652819:1
position: 652819
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:653895:1
position: 653895
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652819-653895:1:exon

AWJ20_201
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SFH1
locus tag: AWJ20_201
product: Sfh1p
transcript id: XM_018878935.1
SIO_010081: AWJ20_201
subclass of: SO_0000673
so part of: AWJ20_201
location: <652819..>653895
location: region:652819-653895:1
so has part: feature:652819-653895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:652819-653895:1:exon

AWJ20_201
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SFH1
locus tag: AWJ20_201
inference: similar to AA sequence:KEGG_Orthology:K11770
note: Component of the RSC chromatin remodeling complex; essential gene required for cell cycle progression and maintenance of proper ploidy; phosphorylated in the G1 phase of the cell cycle; Snf5p paralog; GO_component: GO:0016586 - RSC complex [Evidence IDA] [PMID 10619019]; GO_component: GO:0016586 - RSC complex [Evidence IDA] [PMID 12183366]; GO_component: GO:0016586 - RSC complex [Evidence IDA] [PMID 9154831]; GO_component: GO:0000228 - nuclear chromosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0015616 - DNA translocase activity [Evidence IDA] [PMID 12183366]; GO_function: GO:0015616 - DNA translocase activity [Evidence IDA] [PMID 16455496]; GO_function: GO:0015616 - DNA translocase activity [Evidence IDA] [PMID 17188033]; GO_function: GO:0015616 - DNA translocase activity [Evidence IDA] [PMID 17918861]; GO_process: GO:0043044 - ATP-dependent chromatin remodeling [Evidence IDA] [PMID 12183366]; GO_process: GO:0000086 - G2/M transition of mitotic cell cycle [Evidence IMP] [PMID 17542652]; GO_process: GO:0000086 - G2/M transition of mitotic cell cycle [Evidence IMP] [PMID 9154831]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]; GO_process: GO:0006338 - chromatin remodeling [Evidence IEA]; GO_process: GO:0031055 - chromatin remodeling at centromere [Evidence IMP] [PMID 12697820]; GO_process: GO:0007059 - chromosome segregation [Evidence IGI] [PMID 12697820]; GO_process: GO:0006302 - double-strand break repair [Evidence IMP] [PMID 16024655]; GO_process: GO:0006337 - nucleosome disassembly [Evidence IDA] [PMID 16492771]; GO_process: GO:0033262 - regulation of nuclear cell cycle DNA replication [Evidence IGI] [PMID 17542652]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006368 - transcription elongation from RNA polymerase II promoter [Evidence IDA] [PMID 17081996]; GO_process: GO:0006351 - transcription,…
codon start: 1
product: Sfh1p
translation: MAAAKLPQAVQTGFSSRLRLEQTSLFISTQPVVRATKRATANLISYAEIEEDYDDDDEDPSFGPDGSTGYGSTPAPTSHQQSQSQEPAEPKKVEVKRPAVRTRHPLYTEQQLVDIAQREEILVPIKLALEFDTYRITDFLMWNLNEQVLTPESFAIITCNDLELPVGYTNTISSSIKSQLAEYSSVANIQLPRDCGIHVIIHLSVNLDKELYEDKFEWDLGCDLTPEMFAQSVVKDLGISGEFYPAIAHALHDVLIRMKKEAVEGHLPQEVDNLAAFGAEAGWRVDQELLGAEWAPTLEKLSQEEIERREIERERNIRRLKRESARMGDITDIGGLFGGRSKRRRYDSPSQGGSPAFW
SIO_010081: AWJ20_201
subclass of: SO_0000673
so part of: AWJ20_201
location: 652819..653895
location: region:652819-653895:1
so has part: feature:652819-653895:1:exon

XP_018734451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:652819-653895:1:exon

AWJ20_202
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DSE1
locus tag: AWJ20_202
so part of: sequence
location: <655692..>657173
location: region:655692-657173:1
so has part: feature:655692-657173:1:exon
subclass of: SO_0000010

30033886
type: Gene
SIO_000068: ncbigene

position:655692:1
position: 655692
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:657173:1
position: 657173
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655692-657173:1:exon

AWJ20_202
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DSE1
locus tag: AWJ20_202
product: Dse1p
transcript id: XM_018878946.1
SIO_010081: AWJ20_202
subclass of: SO_0000673
so part of: AWJ20_202
location: <655692..>657173
location: region:655692-657173:1
so has part: feature:655692-657173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655692-657173:1:exon

AWJ20_202
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DSE1
locus tag: AWJ20_202
note: Daughter cell-specific protein; may regulate cross-talk between the mating and filamentation pathways; deletion affects cell separation after division and sensitivity to alpha-factor and drugs affecting the cell wall; relocalizes from bud neck to cytoplasm upon DNA replication stress; GO_component: GO:0005935 - cellular bud neck [Evidence IEA]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0007109 - cytokinesis, completion of separation [Evidence IMP] [PMID 11309124]; GO_process: GO:0001403 - invasive growth in response to glucose limitation [Evidence IMP] [PMID 19820940]; GO_process: GO:0010969 - regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion [Evidence IMP] [PMID 19820940]
codon start: 1
product: Dse1p
translation: MDGPIRVLGDGQVDPGFYNSDDYNSRLDGLKIRQEFEVPAAKQQLRHVNDVNDYFQPQEPTGEVSVSSHYWKIPDKRQYLTAIATHETDPLVAIASGSRESNLFIYELDKNELDASKSILTHHQTITLAEIHSLAWASPNDPLGQQGNVIFTGHNTGMVHMILLPDPYRSSDPAEIMKRFNHNRHVEGATSTRISQLGLTSGSWTCSAPTSIMSLFNEHLFLWDPSRSDMPIMKKKIRGVSCFDISTLHDGVISVGSSKGISIRDVRAKGSHGLSPPTGNDKKVTQVKWSPFDANIVAAVHDGNTLKVWDVRANAPMLTYHGHSDIINSINWSNTDSNQLWSASDDNTIRMWDIDESQEQQRQVDSISNSVQSVRNNEKDAKWVPTKPWKLYRQRLSRYNESFSLGYFVDPSQGGTLSSTTIFSESKQFLSLASFPNTRHGDQSILSIDNDGFFGLHVKENSNAGSRRGSFGYSDSMDSSDSDIGSSYSVPTV
SIO_010081: AWJ20_202
subclass of: SO_0000673
so part of: AWJ20_202
location: 655692..657173
location: region:655692-657173:1
so has part: feature:655692-657173:1:exon

XP_018734452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:655692-657173:1:exon

AWJ20_203
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: EAF3
locus tag: AWJ20_203
so part of: sequence
location: complement(<657634..>658689)
location: region:657634-658689:-1
so has part: feature:657634-658689:-1:exon
subclass of: SO_0000010

30033896
type: Gene
SIO_000068: ncbigene

position:657634:-1
position: 657634
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:658689:-1
position: 658689
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657634-658689:-1:exon

AWJ20_203
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: EAF3
locus tag: AWJ20_203
product: Eaf3p
transcript id: XM_018878955.1
SIO_010081: AWJ20_203
subclass of: SO_0000673
so part of: AWJ20_203
location: complement(<657634..>658689)
location: region:657634-658689:-1
so has part: feature:657634-658689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657634-658689:-1:exon

AWJ20_203
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: EAF3
locus tag: AWJ20_203
inference: similar to AA sequence:KEGG_Orthology:K11339
note: Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition; GO_component: GO:0035267 - NuA4 histone acetyltransferase complex [Evidence IPI] [PMID 15485911]; GO_component: GO:0032221 - Rpd3S complex [Evidence IDA] [PMID 16286007]; GO_component: GO:0032221 - Rpd3S complex [Evidence IDA] [PMID 16286008]; GO_component: GO:0000123 - histone acetyltransferase complex [Evidence IDA] [PMID 11036083]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_function: GO:0004402 - histone acetyltransferase activity [Evidence IDA] [PMID 11036083]; GO_process: GO:0006281 - DNA repair [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IDA] [PMID 16135807]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]; GO_process: GO:0016573 - histone acetylation [Evidence IDA] [PMID 11036083]; GO_process: GO:0016575 - histone deacetylation [Evidence IMP] [PMID 16286007]; GO_process: GO:0060195 - negative regulation of antisense RNA transcription [Evidence IMP] [PMID 21248844]; GO_process: GO:0045892 - negative regulation of transcription, DNA-templated [Evidence IMP] [PMID 16364921]; GO_process: GO:0030174 - regulation of DNA-dependent DNA replication initiation [Evidence IMP] [PMID 19417103]; GO_process: GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IMP] [PMID 11036083]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006368 - transcription elongation from RNA polymerase II promoter [Evidence IGI] [PMID 19948887]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Eaf3p
translation: MTKGPNVLAAGTKCLAFHGPLLYEAKIIKSYNPAVKQAMSRAPPSEGGEKKADISDLPSEFKEKVAYFVHYKGWKSTWDEWIAADRVLQWNEENLRTQKELKQAALAAVNQNKTKKTAASSSSTAGAATNGVSGSLAGETSSKRKDAPKEESGLSFSRSHKRSRPSGQDDLEREEDFIKRLEINIMVPDSLKSLLVDDWEYITKEHQLLSLPQKPNVVEILKKYRDSKPKMRVGSSEAEILDEVISGLKLYFDRSLGNMLLYRFERQQYLEIRKAHPDKEMSELYGAQHLLRLFVSLPNLIALTNMDPQGVSVLKDHLEDCLQFLAKNRDQLFTKAYENTSQRYEAFAKGV
SIO_010081: AWJ20_203
subclass of: SO_0000673
so part of: AWJ20_203
location: complement(657634..658689)
location: region:657634-658689:-1
so has part: feature:657634-658689:-1:exon

XP_018734453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:657634-658689:-1:exon

AWJ20_204
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BNA4
locus tag: AWJ20_204
so part of: sequence
location: <659107..>660621
location: region:659107-660621:1
so has part: feature:659107-660621:1:exon
subclass of: SO_0000010

30033907
type: Gene
SIO_000068: ncbigene

position:659107:1
position: 659107
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:660621:1
position: 660621
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659107-660621:1:exon

AWJ20_204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BNA4
locus tag: AWJ20_204
product: kynurenine 3-monooxygenase
transcript id: XM_018878966.1
SIO_010081: AWJ20_204
subclass of: SO_0000673
so part of: AWJ20_204
location: <659107..>660621
location: region:659107-660621:1
so has part: feature:659107-660621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659107-660621:1:exon

AWJ20_204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BNA4
locus tag: AWJ20_204
inference: similar to AA sequence:KEGG_Orthology:K00486
note: Kynurenine 3-mono oxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p; putative therapeutic target for Huntington disease; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0031966 - mitochondrial membrane [Evidence IEA]; GO_component: GO:0005741 - mitochondrial outer membrane [Evidence IEA,IEA]; GO_component: GO:0005741 - mitochondrial outer membrane [Evidence IDA] [PMID 16407407]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO_function: GO:0004502 - kynurenine 3-monooxygenase activity [Evidence IEA,IEA,IEA]; GO_function: GO:0004502 - kynurenine 3-monooxygenase activity [Evidence IMP] [PMID 15806102]; GO_function: GO:0004497 - monooxygenase activity [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_process: GO:0034354 - 'de novo' NAD biosynthetic process from tryptophan [Evidence IEA]; GO_process: GO:0034354 - 'de novo' NAD biosynthetic process from tryptophan [Evidence IGI] [PMID 12062417]; GO_process: GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO_process: GO:0043420 - anthranilate metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]; GO_process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]; GO_process: GO:0019805 - quinolinate biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0006569 - tryptophan catabolic process [Evidence IEA,IEA]
codon start: 1
product: kynurenine 3-monooxygenase
translation: MSSNESHTVGIVGAGLVGCLAALAFANEGFKVELFESRPDLRDPDQQVLSQLRSINLAVSARGITALRSVDEEMADRVLKDLVPMHGRMVHDLNGKQICQKYGLYGECINSINRSLLNRSLLDELDKLDNVKVTFNHKLIRLDNLKRSSSDNLENAANSEVVRGHFVGTKTNESLTVENVNVWIGADGSYSQVRSQIQRALQMNFSQEYIDHYYLELRIPAKNETAKSSHFDSTCPEAVEVGTEAKFALNPNHLHIWPRHEYMLIALANSDGSFTCTLFAPKSLFDKELAISASDADVVSFFRTNFPSAIELMGDDLLLESFRKNPRGSLVCVKCSPYNVGGKAIIIGDAAHSMVPFYGQGMNCGFEDVRTLMAILKKHEFDFETGFNEYTETRRKDLGAIVDLSMRNYQEMRHDVTSTAYLLRKSVDGFLSRVMGDFWLPLYTMVSFRADIPYSRAVQERQWQNDILTWVIRASVGTSLLAGTALWHGRLFNTLSSLYSRLTR
SIO_010081: AWJ20_204
subclass of: SO_0000673
so part of: AWJ20_204
location: 659107..660621
location: region:659107-660621:1
so has part: feature:659107-660621:1:exon

XP_018734454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:659107-660621:1:exon

AWJ20_205
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SWC4
locus tag: AWJ20_205
so part of: sequence
location: complement(<662932..>665021)
location: region:662932-665021:-1
so has part: feature:662932-665021:-1:exon
subclass of: SO_0000010

30033918
type: Gene
SIO_000068: ncbigene

position:662932:-1
position: 662932
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:665021:-1
position: 665021
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662932-665021:-1:exon

AWJ20_205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SWC4
locus tag: AWJ20_205
product: Swc4p
transcript id: XM_018878977.1
SIO_010081: AWJ20_205
subclass of: SO_0000673
so part of: AWJ20_205
location: complement(join(<662932..664601,664919..>665021))
location: region:662932-665021:-1
so has part: feature:664919-665021:-1:exon
so has part: feature:662932-664601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664919-665021:-1:exon

position:664919:-1
position: 664919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662932-664601:-1:exon

position:664601:-1
position: 664601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AWJ20_205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SWC4
locus tag: AWJ20_205
inference: similar to AA sequence:KEGG_Orthology:K11324
note: Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; GO_component: GO:0035267 - NuA4 histone acetyltransferase complex [Evidence IEA]; GO_component: GO:0035267 - NuA4 histone acetyltransferase complex [Evidence IPI] [PMID 15353583]; GO_component: GO:0035267 - NuA4 histone acetyltransferase complex [Evidence IPI] [PMID 15485911]; GO_component: GO:0000812 - Swr1 complex [Evidence IDA] [PMID 14645854]; GO_component: GO:0000812 - Swr1 complex [Evidence IDA] [PMID 14690608]; GO_component: GO:0000123 - histone acetyltransferase complex [Evidence IPI] [PMID 12672825]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14690591]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence ISS] [PMID 14690591]; GO_function: GO:0003682 - chromatin binding [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA,IEA]; GO_process: GO:0006281 - DNA repair [Evidence IDA] [PMID 16135807]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IPI] [PMID 12672825]; GO_process: GO:0006338 - chromatin remodeling [Evidence IEA]; GO_process: GO:0006338 - chromatin remodeling [Evidence IDA] [PMID 14645854]; GO_process: GO:0006338 - chromatin remodeling [Evidence IPI] [PMID 14690608]; GO_process: GO:0051276 - chromosome organization [Evidence IMP] [PMID 18439903]; GO_process: GO:0043968 - histone H2A acetylation [Evidence IEA]; GO_process: GO:0043967 - histone H4 acetylation [Evidence IEA]; GO_process: GO:0016573 - histone acetylation [Evidence IPI] [PMID 14690591]; GO_process: GO:0043486 - histone exchange [Evidence IPI] [PMID 16299513]; GO_process: GO:0006355 - regulation of transcription, D…
codon start: 1
product: Swc4p
translation: MSSDVRDVLNLPSRPAPKPPVAKRQKTESAMKKMGRSTTAANKNRVWSGFKNQAREDGLVLHHWVRGAAHQEDEEYPFAKYSQSIRVPRFDRQDYDEAFADDSWSYDETCYLFGLCKEYDLRWVVIHDRYDFAKDSSNDNEKKDGQNEKAEGEDSDEKKAEKEQGSDVDSSDEADKNESKEDADADAMDVDEEEPENADVKSSDDKESSGKDDDDSSKDAAADKSNDEKKIEKTAEENQEKTGAVAAPDTQASRTIEDLKLRFYGVCRALLKLQQTRSGIALSPAEEDLYKQMKFSKSNELQRKAHLENLLKRSPAEIAEEEALVIESRKLEAAAERMLMERAELLKLLDAPQASGSIAQYQSSQGLAQLTSTLLTTDKTRKRKDATSSVPGSPSHESAEQSPVVDGSVSSVSASASTGPGASNKSSHDTPTKTKSDEKNKGKPSDGSTDKTGQRVKNEKDSEKAASATPSGGADKDKKTGAAAVAQLIQKKLTAKEEAAYGISYHDKLSPGVSLRSSKITTLKATVQAKVSGVLNELGLPSRPTMPTAKVTAKFESLQQSISVLLEAKKQLDKLDTEVRILKTQRETAK
SIO_010081: AWJ20_205
subclass of: SO_0000673
so part of: AWJ20_205
location: complement(join(662932..664601,664919..665021))
location: region:662932-665021:-1
so has part: feature:664919-665021:-1:exon
so has part: feature:662932-664601:-1:exon

XP_018734455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:664919-665021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662932-664601:-1:exon

AWJ20_206
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YTM1
locus tag: AWJ20_206
so part of: sequence
location: <665452..>666810
location: region:665452-666810:1
so has part: feature:665452-666810:1:exon
subclass of: SO_0000010

30033929
type: Gene
SIO_000068: ncbigene

position:665452:1
position: 665452
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:666810:1
position: 666810
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665452-666810:1:exon

AWJ20_206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YTM1
locus tag: AWJ20_206
product: Ytm1p
transcript id: XM_018878987.1
SIO_010081: AWJ20_206
subclass of: SO_0000673
so part of: AWJ20_206
location: <665452..>666810
location: region:665452-666810:1
so has part: feature:665452-666810:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:665452-666810:1:exon

AWJ20_206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YTM1
locus tag: AWJ20_206
inference: similar to AA sequence:KEGG_Orthology:K14863
note: Constituent of 66S pre-ribosomal particles; forms a complex with Nop7p and Erb1p that is required for maturation of the large ribosomal subunit; has seven C-terminal WD repeats; GO_component: GO:0070545 - PeBoW complex [Evidence IDA,IPI] [PMID 16287855]; GO_component: GO:0005730 - nucleolus [Evidence IEA,IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 11583614]; GO_component: GO:0005654 - nucleoplasm [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 11914276]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IEA]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 11583614]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 17443350]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0043021 - ribonucleoprotein complex binding [Evidence IEA]; GO_process: GO:0051276 - chromosome organization [Evidence IGI] [PMID 10454593]; GO_process: GO:0000466 - maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IEA]; GO_process: GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IEA]; GO_process: GO:0006364 - rRNA processing [Evidence IEA]; GO_process: GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]; GO_process: GO:0042273 - ribosomal large subunit biogenesis [Evidence IMP,IPI] [PMID 11583614]; GO_process: GO:0042273 - ribosomal large subunit biogenesis [Evidence IPI] [PMID 15100437]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA,IEA]
codon start: 1
product: Ytm1p
translation: MSEGANTRQVQIRLVTRDTELQVPDAPLYVPVSLKRYGLSEVVNQLLDQDTPIPFDFLIDGKLLRSSLDGYLIANGLSNETTITLEYARSILPPSFLASFAHQDWVSAVSISRNKATQKIATGSYDGVVRLWNHSGSVTHQLVGHNAAVKAVQWTDASRLVSGGSDRILYLWKFANNNSNEETHDNDDEDDEDAASGKKGSIVAVLQGHTASVDDLAYNKSTKQIVSASADSTLKVWSSNYKELPAAETLAKSSSTASQKRRRVAAASLTSSRTRGALSTLTGHSAPVTGVVYHHTDNHVVYSVSQDHTVRTWDTATESLVDTKTTSFPLLSIASLGPHTGLLACGSSARHITLIDPRTTTTTSQAQLIGHTNFVVSLAPSPDNHYMFCSGSHDGTTRIWDVRAQKSVYVISRESGESPTAVYGVDWDTTVGIASAGQDKKLQINSAAFSKK
SIO_010081: AWJ20_206
subclass of: SO_0000673
so part of: AWJ20_206
location: 665452..666810
location: region:665452-666810:1
so has part: feature:665452-666810:1:exon

XP_018734456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:665452-666810:1:exon

AWJ20_207
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GFA1
locus tag: AWJ20_207
so part of: sequence
location: complement(<667298..>670910)
location: region:667298-670910:-1
so has part: feature:667298-670910:-1:exon
subclass of: SO_0000010

30033940
type: Gene
SIO_000068: ncbigene

position:667298:-1
position: 667298
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:670910:-1
position: 670910
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667298-670910:-1:exon

AWJ20_207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GFA1
locus tag: AWJ20_207
product: glutamine--fructose-6-phosphate transaminase (isomerizing) GFA1
transcript id: XM_018878997.1
SIO_010081: AWJ20_207
subclass of: SO_0000673
so part of: AWJ20_207
location: complement(join(<667298..669304,670842..>670910))
location: region:667298-670910:-1
so has part: feature:670842-670910:-1:exon
so has part: feature:667298-669304:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670842-670910:-1:exon

position:670842:-1
position: 670842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667298-669304:-1:exon

position:669304:-1
position: 669304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AWJ20_207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GFA1
locus tag: AWJ20_207
inference: similar to AA sequence:KEGG_Orthology:K00820
note: Glutamine-fructose-6-phosphate amidotransferase; catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis; GFA1 has a paralogous region, comprising ORFs YMR084W-YMR085W, that arose from the whole genome duplication; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0030246 - carbohydrate binding [Evidence IEA]; GO_function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA,IEA]; GO_function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IDA] [PMID 2656689]; GO_function: GO:0008483 - transaminase activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]; GO_process: GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0034221 - fungal-type cell wall chitin biosynthetic process [Evidence IGI] [PMID 11895440]; GO_process: GO:0006541 - glutamine metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]
codon start: 1
product: glutamine--fructose-6-phosphate transaminase (isomerizing) GFA1
translation: MDLVTVGLRVRELAIPGARAMEAGLQRQEYRGYDSAGLAVDGDKAGEVEIFRSVGKVKALAEVINNAKINTEKVFDCHAGIAHTRWATHGQPKTVNCHPQRSDPNSEFTVVHNGIITNYREIRELLTSKGFKFESETDTEVIAKFFKYIYDSNKQHNLDFSQLAKLVIIELEGAYGLLIKSIHYQDEVVATRKGSPLLVGVKTEKKLKTDFVDVEFPDTLEELSSVPADANSNINGTANGLLIPKDNLRHSVSRAFMSDEGIPMAAEFFLASDPAAVVEHTKKVLFLEDDDIAHIYDGQLHIHRSSNEVGASTIRSIQTLEMELAEIMKGSFDHFMQKEIFEQPESVINTMRGRVDFETNTITLGGLRSYLTTIRRCRRLIMIACGTSYHSCLATRAIFEELTEIPVSVELASDFLDRRSPVFRDDTVVFVSQSGETADTILALQYCLDRGALTVGIVNSVGSSISRQTHCGVHINAGPEIGVASTKAYTSQYIALVMMALSLSDDSLSKSARRLEIIEGLKNISEQISKVLELNDSIKTMCDETLSDQKSLLLLGRGYQHATALEGALKIKEISYMHSEGVLAGELKHGVLALVDENLPIIVMATRDSLFPKVMSAVQQVVARSGNPIIICNPGDKFDPKYKTLEVPATVDCLQGLLNVIPLQLMSYWLAVRKGIDVDFPRNLAKSVTVE
SIO_010081: AWJ20_207
subclass of: SO_0000673
so part of: AWJ20_207
location: complement(join(667298..669304,670842..670910))
location: region:667298-670910:-1
so has part: feature:670842-670910:-1:exon
so has part: feature:667298-669304:-1:exon

XP_018734457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:670842-670910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667298-669304:-1:exon

AWJ20_208
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BSC6
locus tag: AWJ20_208
so part of: sequence
location: complement(<674142..>675548)
location: region:674142-675548:-1
so has part: feature:674142-675548:-1:exon
subclass of: SO_0000010

30033951
type: Gene
SIO_000068: ncbigene

position:674142:-1
position: 674142
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:675548:-1
position: 675548
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674142-675548:-1:exon

AWJ20_208
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BSC6
locus tag: AWJ20_208
product: Bsc6p
transcript id: XM_018879007.1
SIO_010081: AWJ20_208
subclass of: SO_0000673
so part of: AWJ20_208
location: complement(<674142..>675548)
location: region:674142-675548:-1
so has part: feature:674142-675548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674142-675548:-1:exon

AWJ20_208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BSC6
locus tag: AWJ20_208
note: hypothetical protein with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; GO_component: GO:0030137 - COPI-coated vesicle [Evidence IDA] [PMID 14562095]; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA,IEA]; GO_component: GO:0030136 - clathrin-coated vesicle [Evidence IDA] [PMID 14562095]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Bsc6p
translation: MAEKINAEEARQKSAGELDYQENKQNNTETLTLSVPPSDPEDHLYDWNYPIRNIFRVAAGYYSFIICGMNDSSIGVLIPTLEPYYGLDYLLVSLAFLAPFIGYSIAALISDKIHRLIGRCGVGIMGASCQVICYIVVCTAPPFPVFVIMYGIAGFGNGSIDSTVNSWVGGLKHSNEALGLLHGCYGLGGTICPAIFTAMIGHGIRWNHCYFLLIGMGATSILAFASAFWGETAVKYKQEVEKDVTNSMTEERRGDIENSSHDVDTTVGEASNDNKIMLRVVSDRLVWMLSITLFVYLGASVSFGGWISTFMIQVRHGAKDKMGYVTTGFWAGLTVGRMTLGFLVGHFQAEDYFVIFFILVSLASVLIVWLVPVLGVSVAFTIVFGIISGPVFPTIIASALRKLPKYLHVAGVGFCVAVGGGGAALPPFINGVIANKFGPRVLGPYTVILLSLMLVMWLLILKLHPQRN
SIO_010081: AWJ20_208
subclass of: SO_0000673
so part of: AWJ20_208
location: complement(674142..675548)
location: region:674142-675548:-1
so has part: feature:674142-675548:-1:exon

XP_018734458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:674142-675548:-1:exon

AWJ20_209
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_209
so part of: sequence
location: <676215..>676287
location: region:676215-676287:1
so has part: feature:676215-676287:1:exon
subclass of: SO_0000663

30033962
type: Gene
SIO_000068: ncbigene

position:676215:1
position: 676215
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:676287:1
position: 676287
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676215-676287:1:exon

AWJ20_209
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_209
product: tRNA-Trp
SIO_010081: AWJ20_209
subclass of: SO_0000673
so part of: AWJ20_209
location: <676215..>676287
location: region:676215-676287:1
so has part: feature:676215-676287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676215-676287:1:exon

AWJ20_210
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ABP140
locus tag: AWJ20_210
so part of: sequence
location: <676544..>677500
location: region:676544-677500:1
so has part: feature:676544-677500:1:exon
subclass of: SO_0000010

30033974
type: Gene
SIO_000068: ncbigene

position:676544:1
position: 676544
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:677500:1
position: 677500
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676544-677500:1:exon

AWJ20_210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ABP140
locus tag: AWJ20_210
product: Abp140p
transcript id: XM_018879027.1
SIO_010081: AWJ20_210
subclass of: SO_0000673
so part of: AWJ20_210
location: <676544..>677500
location: region:676544-677500:1
so has part: feature:676544-677500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676544-677500:1:exon

AWJ20_210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ABP140
locus tag: AWJ20_210
inference: similar to AA sequence:KEGG_Orthology:K17053
note: AdoMet-dependent tRNA methyltransferase and actin binding protein; C-terminal domain is responsible for 3-methylcytidine modification of residue 32 of the tRNA anticodon loop of tRNA-Thr and tRNA-Ser and contains an S-adenosylmethionine (AdoMet) binding motif; N-terminal actin binding sequence interacts with actin filaments and localizes to actin patches and cables; N- and C-terminal domains are encoded in separate ORFs that are translated into one protein via a +1 frameshift; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 9467951]; GO_component: GO:0005884 - actin filament [Evidence IDA] [PMID 9467951]; GO_component: GO:0032432 - actin filament bundle [Evidence IDA] [PMID 11805329]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA,IEA]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_function: GO:0003779 - actin binding [Evidence IEA]; GO_function: GO:0051015 - actin filament binding [Evidence IDA] [PMID 9467951]; GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_function: GO:0030674 - protein binding, bridging [Evidence IDA] [PMID 9467951]; GO_function: GO:0052735 - tRNA (cytosine-3-)-methyltransferase activity [Evidence IDA,IMP] [PMID 21518804]; GO_function: GO:0052735 - tRNA (cytosine-3-)-methyltransferase activity [Evidence IDA] [PMID 21518805]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0051017 - actin filament bundle assembly [Evidence IDA] [PMID 9467951]; GO_process: GO:0032259 - methylation [Evidence IEA]; GO_process: GO:0030488 - tRNA methylation [Evidence IMP] [PMID 21518804]; GO_process: GO:0030488 - tRNA methylation [Evidence IMP] [PMID 21518805]
codon start: 1
product: Abp140p
translation: MVEMPETQPEVPGPVDTSVSRLERGDTPFTFGQRNLVDEEQVWNHNAWDNVEWGEEQITEAEEKLVKQREAPVKPFDKKLFMSDPAKYWNQFYRNNRENFFKDRKWLRVEFPSLYEATRHDAGKRVILEVGCGAGNTMFPVLEANENPDLMITGVDFSNQAVKLVKESKSFDPKHAHAAVWDLAEPSGALPEGIEEHSVDIVVMIFVFSALAPDQWEQAVRNLKKLLKPDGEILFRDYGRYDLTQLRFKGGRLLDDNFYIRGDGTRVYFFTEEELEQIFGKEFEVAKIAADRRLLVNRLRKLKMYRIWMQARFVNRLE
SIO_010081: AWJ20_210
subclass of: SO_0000673
so part of: AWJ20_210
location: 676544..677500
location: region:676544-677500:1
so has part: feature:676544-677500:1:exon

XP_018734459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676544-677500:1:exon

AWJ20_211
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ENV9
locus tag: AWJ20_211
so part of: sequence
location: complement(<677531..>678349)
location: region:677531-678349:-1
so has part: feature:677531-678349:-1:exon
subclass of: SO_0000010

30033985
type: Gene
SIO_000068: ncbigene

position:677531:-1
position: 677531
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:678349:-1
position: 678349
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677531-678349:-1:exon

AWJ20_211
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ENV9
locus tag: AWJ20_211
product: Env9p
transcript id: XM_018879037.1
SIO_010081: AWJ20_211
subclass of: SO_0000673
so part of: AWJ20_211
location: complement(<677531..>678349)
location: region:677531-678349:-1
so has part: feature:677531-678349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677531-678349:-1:exon

AWJ20_211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ENV9
locus tag: AWJ20_211
note: Protein proposed to be involved in vacuolar functions; mutant shows defect in CPY processing and defects in vacuolar morphology; has similarity to oxidoreductases, found in lipid particles; required for replication of Brome mosaic virus in S. cerevisiae, a model system for studying replication of positive-strand RNA viruses in their natural hosts; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0005811 - lipid particle [Evidence IEA,IEA]; GO_component: GO:0005811 - lipid particle [Evidence IDA] [PMID 14562095]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence ISS] [PMID 8972580]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]; GO_process: GO:0006624 - vacuolar protein processing [Evidence IMP] [PMID 21912603]; GO_process: GO:0007033 - vacuole organization [Evidence IMP] [PMID 21912603]
codon start: 1
product: Env9p
translation: MDRAHWAIRDIQIDAILRKPKLPDRCEFGELKFLRLDLTSLQMVMQSVQNFKKQESSLDLLINNAGVMGLPYAETEDGFEIQTQTDHIGPFLFTIKLISTLRKSKYEPRIVFVSSIGHYMATRKVDLSRSHNHRPNILWTWPRYGNAKTANIHTTIILSELYPDILSLVVHPGFSLQTGILSYWKDLPYVGAAFSQGFTLFNKVFGVTPEQASYSALQAAISDRFSLQKGDSGKYLVTYGAEGVASRRACSYTMARQTWQWTANELKSRNFL
SIO_010081: AWJ20_211
subclass of: SO_0000673
so part of: AWJ20_211
location: complement(677531..678349)
location: region:677531-678349:-1
so has part: feature:677531-678349:-1:exon

XP_018734460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:677531-678349:-1:exon

AWJ20_212
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_212
so part of: sequence
location: complement(<680825..>682444)
location: region:680825-682444:-1
so has part: feature:680825-682444:-1:exon
subclass of: SO_0000010

30033996
type: Gene
SIO_000068: ncbigene

position:680825:-1
position: 680825
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:682444:-1
position: 682444
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680825-682444:-1:exon

AWJ20_212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_212
product: Kinesin-like protein
transcript id: XM_018879048.1
SIO_010081: AWJ20_212
subclass of: SO_0000673
so part of: AWJ20_212
location: complement(join(<680825..681416,681564..>682444))
location: region:680825-682444:-1
so has part: feature:681564-682444:-1:exon
so has part: feature:680825-681416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681564-682444:-1:exon

position:681564:-1
position: 681564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680825-681416:-1:exon

position:681416:-1
position: 681416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AWJ20_212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_212
codon start: 1
product: Kinesin-like protein
translation: MIHAMAKQQASRSKFLRDVKANEKAIQQQQQLQQQLQQQQYQQQQLQQHKQRSHQVQPQRHFAQHEELTASLASARGIAPTTGSNTSKATGTAHLASGAKKKLSEEDPFYKFYSSINSVFTKTFNASIEKAKEERLHQVQNHSSALHKNGMSSSGGASESEANSAITSLMLPIKFDNESFYVVPNTNKSSIEELATENANLRQMINRTSIQLHAYETATKKQKDALKNNLMLLRNEFNSRESARNRQHEEEIEALTSEIDKLKIQIGRMKSRWDDLKESARKRREESVTDDEDKTSNDTCIQEETPAEEPDFDSEAAAEELAEAEEAAAAAEVASVEVVSAEVVSDAVVVSAADVDNVVPGDVSAAEAALETSALEACAAEVIGEEATEAIEEVVWKLSTAELGKTFTTEPPSEADAPKAPLELLESEDVPLPAEPAPLEPDEEPPEPDPESEPDPEPDPDVDPEPEVDPDPDPDPEEPEPEDELLPEPQ
SIO_010081: AWJ20_212
subclass of: SO_0000673
so part of: AWJ20_212
location: complement(join(680825..681416,681564..682444))
location: region:680825-682444:-1
so has part: feature:681564-682444:-1:exon
so has part: feature:680825-681416:-1:exon

XP_018734461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:681564-682444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680825-681416:-1:exon

AWJ20_213
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_213
so part of: sequence
location: complement(<683097..>684227)
location: region:683097-684227:-1
so has part: feature:683097-684227:-1:exon
subclass of: SO_0000010

30034007
type: Gene
SIO_000068: ncbigene

position:683097:-1
position: 683097
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:684227:-1
position: 684227
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683097-684227:-1:exon

AWJ20_213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_213
product: glyoxylate reductase
transcript id: XM_018879058.1
SIO_010081: AWJ20_213
subclass of: SO_0000673
so part of: AWJ20_213
location: complement(<683097..>684227)
location: region:683097-684227:-1
so has part: feature:683097-684227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683097-684227:-1:exon

AWJ20_213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_213
note: Glyoxylate reductase; acts on glyoxylate and hydroxypyruvate substrates; YPL113C is not an essential gene; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0048037 - cofactor binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IMP] [PMID 17173333]; GO_process: GO:0008152 - metabolic process [Evidence IMP] [PMID 17173333]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: glyoxylate reductase
translation: MTASVRPKILLLGVVHFIDKDILKRYESEFELINYDITTKEDLISKLETEFNDIVAIATVWFSFVPVGGLHDEKLLNALPKTLKVIATPTVGVDLYNLDALTKRGIVLANSAGITSDDVADIALHLSLSAYRFTSLFENSLRTHRNTLSARYVVEDQFDKAAGRASSEDVSAKRKMVYGHLVGNYKVDSPKGQVAGIVGFGSIGRAIAKRLAVLGMKIHYLKRSPLTESEIEELGGTGSTPPFEITRHETFDSLAKVSNLLVLVVPLTSDTRHILNERTIALLPDAARVVNVGRGPLIDQKALIKALESGKLSSAGLDVYEQEPLIEPALAERHDVTLLPHIGSCTDESAQAALENCFVNIKDVVLGSGKARNSVN
SIO_010081: AWJ20_213
subclass of: SO_0000673
so part of: AWJ20_213
location: complement(683097..684227)
location: region:683097-684227:-1
so has part: feature:683097-684227:-1:exon

XP_018734462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:683097-684227:-1:exon

AWJ20_214
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_214
so part of: sequence
location: complement(<684631..>685875)
location: region:684631-685875:-1
so has part: feature:684631-685875:-1:exon
subclass of: SO_0000010

30034018
type: Gene
SIO_000068: ncbigene

position:684631:-1
position: 684631
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:685875:-1
position: 685875
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684631-685875:-1:exon

AWJ20_214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_214
product: hypothetical protein
transcript id: XM_018879068.1
SIO_010081: AWJ20_214
subclass of: SO_0000673
so part of: AWJ20_214
location: complement(<684631..>685875)
location: region:684631-685875:-1
so has part: feature:684631-685875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684631-685875:-1:exon

AWJ20_214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_214
codon start: 1
product: hypothetical protein
translation: MSELPDISHVAGVVVSFLKGEGFLGEGYENIEKLIVGMFAVLMSYLARRLYKNYNPFGKDSQHQVRQGRYIAGRYPSAIVPVSRSFDWENENPRKYRPYKPGPYFMTMGLRALDPNDWLLLENTYKDITKARAEIVENHRDNTVLTNPLAIEAVDETYDMFVNYITKKFPKYFYTTRRRPGYIYNAIKKDYIPSTSEQYDKDFEESIPDKKERMDSKIRLLAKHFEEDFLILIYDEKTQQYYLRAGSFAFPSGFNPAEKLNLALKDIHGPVPLYKEKIENAMDRFFHKIEVGKWVQRYNWSIQGHTNLYAPTLNHAKKGAKLKAINPDELDFDKVFLRVERQVLTRLPNTKHLLFTIRTYVTPLSQIREEDRALELVEAIDNLPDNVAHYKKRDEWGPAVKAYLQRESDGIKKK
SIO_010081: AWJ20_214
subclass of: SO_0000673
so part of: AWJ20_214
location: complement(684631..685875)
location: region:684631-685875:-1
so has part: feature:684631-685875:-1:exon

XP_018734463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:684631-685875:-1:exon

AWJ20_215
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: tam14
locus tag: AWJ20_215
so part of: sequence
location: complement(<688654..>689403)
location: region:688654-689403:-1
so has part: feature:688654-689403:-1:exon
subclass of: SO_0000010

30034029
type: Gene
SIO_000068: ncbigene

position:688654:-1
position: 688654
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:689403:-1
position: 689403
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688654-689403:-1:exon

AWJ20_215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: tam14
locus tag: AWJ20_215
product: conserved fungal protein
transcript id: XM_018879079.1
SIO_010081: AWJ20_215
subclass of: SO_0000673
so part of: AWJ20_215
location: complement(<688654..>689403)
location: region:688654-689403:-1
so has part: feature:688654-689403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688654-689403:-1:exon

AWJ20_215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: tam14
locus tag: AWJ20_215
note: top hit is XP_002839470.1 originated in Tuber melanosporum Mel28
codon start: 1
product: conserved fungal protein
translation: MPRKRARNPLKRKQVDFDTAPSVLINPKKVSKKNKAASKPTQNGDDMEDDMPKEFKRLMNWSNKKQGKVAKGTEGEERGRSRTRESTSSVASISNTTPAADLKILPGERMSDFSRRVNEALPLVKARKGSPSRADKRKARKRAKDEANSRKKKDDDDDDDNDEDDEDQKPKKGKREPSPDPWAHLESKKPKFGDVADRPPELNLPTKLLRNVPKSAGSLARRVILEEERDRVIQSYRALMEQKRGGDVL
SIO_010081: AWJ20_215
subclass of: SO_0000673
so part of: AWJ20_215
location: complement(688654..689403)
location: region:688654-689403:-1
so has part: feature:688654-689403:-1:exon

XP_018734464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688654-689403:-1:exon

AWJ20_216
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NOC3
locus tag: AWJ20_216
so part of: sequence
location: <689818..>691890
location: region:689818-691890:1
so has part: feature:689818-691890:1:exon
subclass of: SO_0000010

30034040
type: Gene
SIO_000068: ncbigene

position:689818:1
position: 689818
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:691890:1
position: 691890
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689818-691890:1:exon

AWJ20_216
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NOC3
locus tag: AWJ20_216
product: Noc3p
transcript id: XM_018879089.1
SIO_010081: AWJ20_216
subclass of: SO_0000673
so part of: AWJ20_216
location: <689818..>691890
location: region:689818-691890:1
so has part: feature:689818-691890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689818-691890:1:exon

AWJ20_216
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NOC3
locus tag: AWJ20_216
inference: similar to AA sequence:KEGG_Orthology:K14834
note: Subunit of a nuclear complex with Noc2p and pre-replicative complexes; the Noc2p-Noc3p complex binds to 66S ribosomal precursors to mediate their maturation and intranuclear transport; binds to chromatin at active replication origins, and is required for pre-RC formation and maintenance during DNA replication licensing; GO_component: GO:0030691 - Noc2p-Noc3p complex [Evidence IPI] [PMID 11371346]; GO_component: GO:0005656 - nuclear pre-replicative complex [Evidence IDA] [PMID 22421151]; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 11371346]; GO_component: GO:0005654 - nucleoplasm [Evidence IDA] [PMID 11371346]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 12110182]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 23212245]; GO_function: GO:0003682 - chromatin binding [Evidence IDA] [PMID 12110182]; GO_process: GO:0006260 - DNA replication [Evidence IEA]; GO_process: GO:0006270 - DNA replication initiation [Evidence IDA] [PMID 12110182]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0006267 - pre-replicative complex assembly involved in nuclear cell cycle DNA replication [Evidence IMP] [PMID 22421151]; GO_process: GO:0006364 - rRNA processing [Evidence IDA] [PMID 12110182]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]
codon start: 1
product: Noc3p
translation: MAKRPRGKVAEKLAKRSKDRHTADSALSSSSWSALGEVDEDPNYPDSDQEQDYDSRPRKFQVADDERVERLPVKTLEGEVKRVMGKKEKKIQKEVEEDKEDESESEEDESSKSEEVTTEQKASGDGEDDSDSEPEDNDPVSLNQKLLELKEIIAETAEKLNEDPEEHISKLRELRELIASSKHFKAKQLIILSLVQIFQSLIPGYRIRPLTESEQKEKVSKEVRKLRNFEESLLLNYKAYISTLQTFSRKGKSSQVGTVKYSLASVSILAACELLESVPYFNFRSELVQIIVDKLSTKKNDETFYKSIQTLETIFKADEEGQISFDLVRLLSKMIKARKYKVDEKVINSLLHLRLLTELAARADLEKVQRFVEDEGPKKKKDRVHLSKKERKARKERKAITEEMMRAETAVSAEERERLQGETLKLVFILYFNILKERSEKLIGVTLEGLAKFAHLINADLFGDLLEVLRELILERQKRIVGGEYEFKESATRESLLCIVTAFALLSAQAGVGESMNLDLTFFVNHFYSSLYSLSLNADIEFSHKTLRLDDPLKAASITPNKYKVNISTETEMMIRAFEFIFFRQRSIGPNRVQSFAKRLAISTLHMPEKSCAASLRILDKMTKKFNSMPALYSTEDRVANGVYNMEVDDPEHSNPGAATIWETVLLEKHYSPMVAKAAQAVPKGAIVPT
SIO_010081: AWJ20_216
subclass of: SO_0000673
so part of: AWJ20_216
location: 689818..691890
location: region:689818-691890:1
so has part: feature:689818-691890:1:exon

XP_018734465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:689818-691890:1:exon

AWJ20_217
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_217
so part of: sequence
location: <695480..>696115
location: region:695480-696115:1
so has part: feature:695480-696115:1:exon
subclass of: SO_0000010

30034051
type: Gene
SIO_000068: ncbigene

position:695480:1
position: 695480
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:696115:1
position: 696115
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695480-696115:1:exon

AWJ20_217
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_217
product: hypothetical protein
transcript id: XM_018879098.1
SIO_010081: AWJ20_217
subclass of: SO_0000673
so part of: AWJ20_217
location: <695480..>696115
location: region:695480-696115:1
so has part: feature:695480-696115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695480-696115:1:exon

AWJ20_217
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_217
codon start: 1
product: hypothetical protein
translation: MTSPKSPNEKSVGAYRVDELSSSSLSIENEDLAVGQDNIFKDPAIYEHYKKVYEEANYECRHLLDPDFEWTPQEERKLVWKTEWRCCFVAFLFFFNLDIDRGNISSALGDNMLTDLKLTTNDYNLGSTINLVCFLSSELPSQLISKKLGPDVWIPLQMVLFSAIAMSQMAIQNRAGFFATRALLGALQGGVSYSSKSCFQHKLSNLVTVHT
SIO_010081: AWJ20_217
subclass of: SO_0000673
so part of: AWJ20_217
location: 695480..696115
location: region:695480-696115:1
so has part: feature:695480-696115:1:exon

XP_018734466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695480-696115:1:exon

AWJ20_218
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_218
so part of: sequence
location: <696333..>697175
location: region:696333-697175:1
so has part: feature:696333-697175:1:exon
subclass of: SO_0000010

30034062
type: Gene
SIO_000068: ncbigene

position:696333:1
position: 696333
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:697175:1
position: 697175
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696333-697175:1:exon

AWJ20_218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_218
product: hypothetical protein
transcript id: XM_018879109.1
SIO_010081: AWJ20_218
subclass of: SO_0000673
so part of: AWJ20_218
location: <696333..>697175
location: region:696333-697175:1
so has part: feature:696333-697175:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:696333-697175:1:exon

AWJ20_218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_218
codon start: 1
product: hypothetical protein
translation: MPPSVVQTKTWFRPKGWYTEREEKIQVNRILRDDPSKGDMHNREAIGPKLLYKCISDYHLWPIYFVRLLCDINVSPVSNYMTLTLRKLGFSTLNTTLLVIPSSFISIATMLIVTYGSEFFNQRAFALLLTPLWCVPFLAVLRFWPGAQIEIWKTYAVLILALSRPVASVLTISWAASNSSTVSTRTVSAALVNIFSQTAGIISTQIYRADDAPKYHRGNLQLLLIAIGAIGMCLVAKAYYVIQNKRRDKVWNAMSKEEQTYYILNTKDKANNRLDFRFVH
SIO_010081: AWJ20_218
subclass of: SO_0000673
so part of: AWJ20_218
location: 696333..697175
location: region:696333-697175:1
so has part: feature:696333-697175:1:exon

XP_018734467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:696333-697175:1:exon

AWJ20_219
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_219
so part of: sequence
location: <697550..>699979
location: region:697550-699979:1
so has part: feature:697550-699979:1:exon
subclass of: SO_0000010

30034073
type: Gene
SIO_000068: ncbigene

position:697550:1
position: 697550
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:699979:1
position: 699979
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697550-699979:1:exon

AWJ20_219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_219
product: hypothetical protein
transcript id: XM_018879119.1
SIO_010081: AWJ20_219
subclass of: SO_0000673
so part of: AWJ20_219
location: <697550..>699979
location: region:697550-699979:1
so has part: feature:697550-699979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697550-699979:1:exon

AWJ20_219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_219
inference: similar to AA sequence:KEGG_Orthology:K16572
codon start: 1
product: hypothetical protein
translation: MSDHSRRRSEKIEQLVRSIVVQTSSKRFERILTWTKKQATADHISIDKDAVLNAYDGLIEKFDVLGRSDLSSALQDRIEELTPMVDNKDGYSSAQCLALIKDLSVDPWRYPLVDLKARADLPRAAGAVPLTWKDIVDSEPLEGPHWEEVSEEETLSGLETESDDNGAENSVPDPSRPVTQPARRPSAARNPAPQAFIYPDPYSALEAIRLPSYGQSHLPYWMVKDDGISTPPVISTADILREIVFALLGLPSSVFTRTTIDNFNIVVVDEAAVSFFNLPHLSTEALLSILREFANFASIIAQLRQFSLIYFVMEHFQSFDYKNILAILDENCRKIETSILEFQDELQNDKNSTVSLLSFETYCRQLLLPYTAVVSIIKTVCAESYKKVTVVSLLDTLYDRLCTSDISGDDYYDLLYDIFCRVLQDYIEQLRPWLESGIVPQTRSFVVEAVPDNRLPTSSGQFRLVKANIAECFNGCSKLVLSAGKAAYILKILASPDSIISDGISIPSKLGFSETISGLGGKSAGNFADSLDQMLHAYFGNIEQRNNELLYRRIISDYHLKQNLIHQFGIYFMFDGVSSALFLERLFERIDDRYPIDRYSVADILEETWSCDKLYPLFNITAVIAQDALDFSIKIDVPLSTTVFKEIITHDTLAVYQSIWELQLHCRRIYYRLSRMRGLPVKFLFINFLNAYMVYLQESVLRKESNHLLSKLDSPWLSFQELIDAHRMHLDIIYKRSLMGTHARKALWELLSYGYTLDHTGAPELRVFTQLYEQLQASFTGIDDPVIQTLAQLLSPDSQIKIKENHAIS
SIO_010081: AWJ20_219
subclass of: SO_0000673
so part of: AWJ20_219
location: 697550..699979
location: region:697550-699979:1
so has part: feature:697550-699979:1:exon

XP_018734468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:697550-699979:1:exon

AWJ20_220
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_220
so part of: sequence
location: <706765..>707160
location: region:706765-707160:1
so has part: feature:706765-707160:1:exon
subclass of: SO_0000010

30034085
type: Gene
SIO_000068: ncbigene

position:706765:1
position: 706765
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:707160:1
position: 707160
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706765-707160:1:exon

AWJ20_220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_220
product: DNA-binding protein C1D
transcript id: XM_018879128.1
SIO_010081: AWJ20_220
subclass of: SO_0000673
so part of: AWJ20_220
location: <706765..>707160
location: region:706765-707160:1
so has part: feature:706765-707160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:706765-707160:1:exon

AWJ20_220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_220
codon start: 1
product: DNA-binding protein C1D
translation: MNELERVKSYMNKVKEQTGEPVKKPQRARVVDKEAANRFIQNALSDSNDKTEVVFSGKHTRLDGDETKDKEDDKEGKAEERDVDTTAPKKRAAKSSSEAPPKKKSNKKAVVRAKKKAAKEAAAEAAASARE
SIO_010081: AWJ20_220
subclass of: SO_0000673
so part of: AWJ20_220
location: 706765..707160
location: region:706765-707160:1
so has part: feature:706765-707160:1:exon

XP_018734469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706765-707160:1:exon

AWJ20_221
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_221
so part of: sequence
location: <708488..>709039
location: region:708488-709039:1
so has part: feature:708488-709039:1:exon
subclass of: SO_0000010

30034096
type: Gene
SIO_000068: ncbigene

position:708488:1
position: 708488
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:709039:1
position: 709039
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708488-709039:1:exon

AWJ20_221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_221
product: hypothetical protein
transcript id: XM_018879138.1
SIO_010081: AWJ20_221
subclass of: SO_0000673
so part of: AWJ20_221
location: <708488..>709039
location: region:708488-709039:1
so has part: feature:708488-709039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708488-709039:1:exon

AWJ20_221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_221
codon start: 1
product: hypothetical protein
translation: MTAKPVSEEVEKMKTSTWGGSEKKETDMDGLGGLESGLAGSGTGTSENDISDIEASERNFDKGKTFESAKPPFESSEVVQPDQAESKDEQISAPVTAPPLVGPPPNGGLKAWLVVAGGFFALFNSWGVVNAFGSFQAYYSTNLLKNESDSAISWIGAIQGFIIVSTGIIVSANGTGVPRVGVF
SIO_010081: AWJ20_221
subclass of: SO_0000673
so part of: AWJ20_221
location: 708488..709039
location: region:708488-709039:1
so has part: feature:708488-709039:1:exon

XP_018734470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:708488-709039:1:exon

AWJ20_222
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PEX3
locus tag: AWJ20_222
so part of: sequence
location: complement(<710428..>711885)
location: region:710428-711885:-1
so has part: feature:710428-711885:-1:exon
subclass of: SO_0000010

30034107
type: Gene
SIO_000068: ncbigene

position:710428:-1
position: 710428
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:711885:-1
position: 711885
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710428-711885:-1:exon

AWJ20_222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PEX3
locus tag: AWJ20_222
product: Pex3p
transcript id: XM_018879149.1
SIO_010081: AWJ20_222
subclass of: SO_0000673
so part of: AWJ20_222
location: complement(<710428..>711885)
location: region:710428-711885:-1
so has part: feature:710428-711885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:710428-711885:-1:exon

AWJ20_222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PEX3
locus tag: AWJ20_222
inference: similar to AA sequence:KEGG_Orthology:K13336
note: Peroxisomal membrane protein (PMP); required for proper localization and stability of PMPs; anchors peroxisome retention factor Inp1p at the peroxisomal membrane; interacts with Pex19p; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 16009135]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0005779 - integral component of peroxisomal membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IEA]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IDA] [PMID 1894692]; GO_component: GO:0005777 - peroxisome [Evidence IEA]; GO_component: GO:0005777 - peroxisome [Evidence IDA] [PMID 23900285]; GO_function: GO:0005515 - protein binding [Evidence IPI] [PMID 9418908]; GO_function: GO:0030674 - protein binding, bridging [Evidence IMP] [PMID 23900285]; GO_process: GO:0032581 - ER-dependent peroxisome organization [Evidence IDA] [PMID 17646399]; GO_process: GO:0032581 - ER-dependent peroxisome organization [Evidence IMP] [PMID 20427571]; GO_process: GO:0045033 - peroxisome inheritance [Evidence IMP] [PMID 19948495]; GO_process: GO:0007031 - peroxisome organization [Evidence IEA]; GO_process: GO:0045046 - protein import into peroxisome membrane [Evidence IMP] [PMID 10637226]
codon start: 1
product: Pex3p
translation: MFQSASNLVKRHKRKILVATGLVAGGYFVIDYVKNKFFELQDRLATERQARENLKRRFEQNQEDATFTIMALLPSLASQIMEKYPVEKITQELQAKRTERIATTAAIANEAVTNGTPSLNDSVQTLPSETSGNTPIPANSSSPAVANEGNTTNASTGPSAPASLTGSWSVTEDAAPVVKKTKTELWRDLKIRSIARAMTLVYCSALLVFFTRLQLNILGRKNYVASVIHMAESRTKQQKLEQEENAYGAYISEPTEEDLVKLALEEEEVNINRMYLTFSWWLLNKGWAALSERIEDAVTDVFDSVNPRTDLSLAEISDLIGQVQFKIDHPISVLESNNFINNLLPPTELESYVLSQAPVNPDNLSTLRSADNDENLVTPPLRRLLDETYDFIESPNAIDVIQRLVHSGLTVFVESISTIYPPGGADAEPSKVKLASILANVTRQGHALAAGKPLDPNEYILAMINVPELDGFSALVYSNFGTSSE
SIO_010081: AWJ20_222
subclass of: SO_0000673
so part of: AWJ20_222
location: complement(710428..711885)
location: region:710428-711885:-1
so has part: feature:710428-711885:-1:exon

XP_018734471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710428-711885:-1:exon

AWJ20_223
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_223
so part of: sequence
location: <713600..>714892
location: region:713600-714892:1
so has part: feature:713600-714892:1:exon
subclass of: SO_0000010

30034118
type: Gene
SIO_000068: ncbigene

position:713600:1
position: 713600
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:714892:1
position: 714892
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713600-714892:1:exon

AWJ20_223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_223
product: hypothetical protein
transcript id: XM_018879160.1
SIO_010081: AWJ20_223
subclass of: SO_0000673
so part of: AWJ20_223
location: <713600..>714892
location: region:713600-714892:1
so has part: feature:713600-714892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713600-714892:1:exon

AWJ20_223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_223
codon start: 1
product: hypothetical protein
translation: MGLASKLAAAGVAAAVSNMSGGAPGGPGGYGRPPAPGGYGQPQGYNQGYSQQSGPGGYPPPGQQQPGHGYPPSQQQPGHGYPPSQQQPSHGYPPSQQHPGYPSQQQPGYPSQQQPGYGQPGPGGYGAAAAGAALGAAAGYGAASYGGGPAGQAGGYYSILEAAVRENRLEAFYPPQRLQQVAASVSGQVQQLAQTWDIPMEIARDLVRLALYDIVLYVDDSGSMAFEEKGERIDDLKLILHRVSFAASLFDTNGIEVRFMNNNYQGNGIRSEQQVGQMMQNVKFQGLTPLGTNLRKKVLDPLVVGPASAGQLQKPVLIITITDGEPAGESSSTLKHAIKNAKHQLQSTRYGPGALALQFGQVGNDLKARAFLASLDNDREVGPMIDCTSNFEVEQDEMARIGVDLSPSLWLVKILVGSIDRSYDKKDERQ
SIO_010081: AWJ20_223
subclass of: SO_0000673
so part of: AWJ20_223
location: 713600..714892
location: region:713600-714892:1
so has part: feature:713600-714892:1:exon

XP_018734472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:713600-714892:1:exon

AWJ20_224
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PCD1
locus tag: AWJ20_224
so part of: sequence
location: complement(<715148..>715918)
location: region:715148-715918:-1
so has part: feature:715148-715918:-1:exon
subclass of: SO_0000010

30034129
type: Gene
SIO_000068: ncbigene

position:715148:-1
position: 715148
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:715918:-1
position: 715918
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715148-715918:-1:exon

AWJ20_224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PCD1
locus tag: AWJ20_224
product: Pcd1p
transcript id: XM_018879171.1
SIO_010081: AWJ20_224
subclass of: SO_0000673
so part of: AWJ20_224
location: complement(<715148..>715918)
location: region:715148-715918:-1
so has part: feature:715148-715918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715148-715918:-1:exon

AWJ20_224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PCD1
locus tag: AWJ20_224
note: 8-oxo-dGTP diphosphatase; prevents spontaneous mutagenesis via sanitization of oxidized purine nucleoside triphosphates; can also act as peroxisomal pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function to remove potentially toxic oxidized CoA disulfide from peroxisomes to maintain the capacity for beta-oxidation of fatty acids; nudix hydrolase family member; similar E. coli MutT and human, rat and mouse MTH1; GO_component: GO:0005777 - peroxisome [Evidence IEA,IEA]; GO_component: GO:0005777 - peroxisome [Evidence IDA] [PMID 10922370]; GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity [Evidence IDA,IMP] [PMID 15475388]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA,IEA]; GO_function: GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0030145 - manganese ion binding [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016462 - pyrophosphatase activity [Evidence IDA] [PMID 10922370]; GO_process: GO:0006281 - DNA repair [Evidence IMP] [PMID 15475388]; GO_process: GO:0009132 - nucleoside diphosphate metabolic process [Evidence IEA]
codon start: 1
product: Pcd1p
translation: MEINRLKSFQTDESDHLWTSVPYNKRAAVLIILYRNAAGKLLTVLTVRSFNMRTYPGQAAFPGGRSDHPNENPWSTALREAQEEIGFDPASYKFHQLCSLPCYLSRNFLVVRPCVCYIEPLHETSPPVSIEQIVAKMNGAEVQIAYGLELETFFLNDPSTLKASDPTEWAGQPWVYYEYEAHRNENSEWVFEDPTSRLAESYASNSVTGLTAQIALDCARVAYGRDPEGFPIIPSIGYDLAVADCIKLGTFNRKRM
SIO_010081: AWJ20_224
subclass of: SO_0000673
so part of: AWJ20_224
location: complement(715148..715918)
location: region:715148-715918:-1
so has part: feature:715148-715918:-1:exon

XP_018734473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:715148-715918:-1:exon

AWJ20_225
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_225
so part of: sequence
location: complement(<716670..>719402)
location: region:716670-719402:-1
so has part: feature:716670-719402:-1:exon
subclass of: SO_0000010

30034140
type: Gene
SIO_000068: ncbigene

position:716670:-1
position: 716670
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:719402:-1
position: 719402
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716670-719402:-1:exon

AWJ20_225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_225
product: hypothetical protein
transcript id: XM_018879182.1
SIO_010081: AWJ20_225
subclass of: SO_0000673
so part of: AWJ20_225
location: complement(<716670..>719402)
location: region:716670-719402:-1
so has part: feature:716670-719402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716670-719402:-1:exon

AWJ20_225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_225
codon start: 1
product: hypothetical protein
translation: MKLSGLFQSSKPLVTALYILLVTIGPTSAGDVDPSPSTTIIDILSASPEYSILLHYLQKHGLVNLINQSRNSTLLAPVNSAFYQLEEDGATVTKDLLLYHFLNGTVVSDNVTSDVVLQSHLSKRLYEAWDDDEDEHDREGEEELKDGIPVVISPDSSHDSDDDGIGLKVNGQATVVELDQMAGYHRGVVQGVDSLLSIPPTLCEVIEAKSRKHSFFSELFSLEYNCDSSRKKQTKLRKNLVTLLVPNDNAFDKFIDVEKDYLLSASAKADREILINRHTIDHLLKPQAIQTSIEPRHRSERSSGEMTAVTADGTVLKFDRDYIINSTFNPDEVNILTRDGIIYTYDSLLSTRQDASSKVVEFNPEKYLHGLGADLFVEETYLRGLQSLIDGTETEPQSIFVYPIGTSETNSHPNIKYHIVKGANALEDLDTRGTYLLTSKLSSHRMGDYYQKIKAIVSSEGTISLNSQLVLTSDYNVGNTSIYLLEGDLDVPPSLAFALGPFFQSSFSVAFLESTGLISPPKNDPPRTYLVPSRRAWENQILLKLYLQSNHTALRAVFESLIFETPVYSNEKPRVVESLDGTKSKLSVFSGGEGRHNGPYIARVNNTSYDIDAEDILFNSGVAHSIDQLSIPKHVEVSPHDLIIAGDRKDFVDLLKARNMSHILDRNESYTILVPNMDQLADNGYYANSSKTDRLLSLHILPDNPINTLFAGEAIPTLDEDVQLSGRNVTENFHILSIVDGTGQETYVVSRGDAQNHEFGKHSTVLFLDRYISPDWVHTPLIRPPYRLKTHVAILIGAALGLILAATSIVTCLYAFVGTRKATDPENDEHRPLLRDRTTSPSGRSTRSARSNRSRRDSNNGASDVDGTSPNSTSNNFYSTISSNSSINPIATGHVNEHREFGRHLNLPSP
SIO_010081: AWJ20_225
subclass of: SO_0000673
so part of: AWJ20_225
location: complement(716670..719402)
location: region:716670-719402:-1
so has part: feature:716670-719402:-1:exon

XP_018734474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:716670-719402:-1:exon

AWJ20_226
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SAT4
locus tag: AWJ20_226
so part of: sequence
location: <726023..>728335
location: region:726023-728335:1
so has part: feature:726023-728335:1:exon
subclass of: SO_0000010

30034151
type: Gene
SIO_000068: ncbigene

position:726023:1
position: 726023
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:728335:1
position: 728335
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726023-728335:1:exon

AWJ20_226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SAT4
locus tag: AWJ20_226
product: serine/threonine protein kinase SAT4
transcript id: XM_018879193.1
SIO_010081: AWJ20_226
subclass of: SO_0000673
so part of: AWJ20_226
location: <726023..>728335
location: region:726023-728335:1
so has part: feature:726023-728335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726023-728335:1:exon

AWJ20_226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SAT4
locus tag: AWJ20_226
inference: similar to AA sequence:KEGG_Orthology:K08286
codon start: 1
product: serine/threonine protein kinase SAT4
translation: MSVAFDLQQCSPNTGPNPSPLSDRETNSSTPTSPPSPKAIISRTGKEELNLTSSTTTPVSNNNLSISPPISPLITNRTDGVKNVVSLTGVTENIPSLELNSAASERGAEAEAGIGKENDIVPALGERTVQTKSRSYSTSSTSPPKLSVVTGLSGPPGQKSASAAVVTNRSGTSRPRSNSVLHSTSSGGSGGSGFSSGFGSGSGFSQATPAPAPAPTPPLRPRSNSKISGTMTKLRSFLFSGEKERPGVTPGHTPLGSTAQSGTATPANTLHTSVTPSTIGSHTESTLHIPEAGIGRSGGPKISSGGTSSPANGGGSANGSIGTQSPSSSTVSIPSLHETSSPASTPQPAQTGNTTPNSSSASVGRSGSISKSSSSSAAGLPRFAVSEDGSTHSHHLKTAKRQEKLSGMIKEFLGGKKLRDEAVSAVSAILNSGGNASNAAAQVPGNQPPSLMAGFVHQIKKGDQDVESLFKTGVVPSQSSFVEKYGKCHEVIGKGAFGVVRVAHKTDPKNQRDLLFAVKEFKKRPQESEQKYSKRLTSEFCISSSLHHPNIIQTLDLLQDAKGEYCEVMEYCAGGDLYSLILVVGKLEYLEADCFFKQIIRGVNYMHEMGVAHRDLKPENILLTSNGAVKITDFGNGECFRMAWEKVIHLSNGVCGSAPYIAPEEFTEPEFDPRALDIWAVGVIYMAMRTGRHLWRMAKASEDEFYAKYLEGRKDEHGYEPIESLKRARCRNVIYSILDPVPSRRITGKQILNSEWGREIHVCQAGDLGL
SIO_010081: AWJ20_226
subclass of: SO_0000673
so part of: AWJ20_226
location: 726023..728335
location: region:726023-728335:1
so has part: feature:726023-728335:1:exon

XP_018734475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726023-728335:1:exon

AWJ20_227
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RVS161
locus tag: AWJ20_227
so part of: sequence
location: <733058..>733846
location: region:733058-733846:1
so has part: feature:733058-733846:1:exon
subclass of: SO_0000010

30034162
type: Gene
SIO_000068: ncbigene

position:733058:1
position: 733058
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:733846:1
position: 733846
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733058-733846:1:exon

AWJ20_227
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RVS161
locus tag: AWJ20_227
product: amphiphysin-like protein RVS161
transcript id: XM_018879204.1
SIO_010081: AWJ20_227
subclass of: SO_0000673
so part of: AWJ20_227
location: <733058..>733846
location: region:733058-733846:1
so has part: feature:733058-733846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733058-733846:1:exon

AWJ20_227
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RVS161
locus tag: AWJ20_227
inference: similar to AA sequence:KEGG_Orthology:K12562
note: Amphiphysin-like lipid raft protein; interacts with Rvs167p and regulates polarization of the actin cytoskeleton, endocytosis, cell polarity, cell fusion and viability following starvation or osmotic stress; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 16239147]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA,IEA]; GO_component: GO:0005937 - mating projection [Evidence IDA] [PMID 9566960]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_component: GO:0045121 - membrane raft [Evidence IDA] [PMID 12477802]; GO_function: GO:0008092 - cytoskeletal protein binding [Evidence IPI,ISS] [PMID 10388809]; GO_function: GO:0008289 - lipid binding [Evidence IDA] [PMID 20610658]; GO_process: GO:0051666 - actin cortical patch localization [Evidence IMP] [PMID 8590801]; GO_process: GO:0030036 - actin cytoskeleton organization [Evidence IMP] [PMID 7891662]; GO_process: GO:0031532 - actin cytoskeleton reorganization [Evidence IMP] [PMID 7891662]; GO_process: GO:0000747 - conjugation with cellular fusion [Evidence IMP] [PMID 11096097]; GO_process: GO:0006897 - endocytosis [Evidence IMP] [PMID 8590801]; GO_process: GO:0060988 - lipid tube assembly [Evidence IDA] [PMID 20610658]; GO_process: GO:0006970 - response to osmotic stress [Evidence IMP] [PMID 1776363]; GO_process: GO:0042594 - response to starvation [Evidence IMP] [PMID 1776363]
codon start: 1
product: amphiphysin-like protein RVS161
translation: MSWNGFKKAVSRAGTSVMMKTGHVEKTVDKEFEVEERRYRTMETACMSLQKEAKGYLDSLRAMTASQTRIAETIDAFYGDAGTRDGVSKYYLTAVQELDSETVKALDGPFRETVLEPVSRFCAYFTDINEAVKKRNHKLLDYDSLRAKVKRLTEKPSDDVSKLPRLEKELSMAKEIYDQLNQQLINELPQLIDLRVPYLDPSFEALVKIQLRFCTESYTRLAQVQQYLDASTREEYANGQLDSRVEQVLLEMRELSITSLGN
SIO_010081: AWJ20_227
subclass of: SO_0000673
so part of: AWJ20_227
location: 733058..733846
location: region:733058-733846:1
so has part: feature:733058-733846:1:exon

XP_018734476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733058-733846:1:exon

AWJ20_228
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_228
so part of: sequence
location: complement(<735245..>735589)
location: region:735245-735589:-1
so has part: feature:735245-735589:-1:exon
subclass of: SO_0000010

30034173
type: Gene
SIO_000068: ncbigene

position:735245:-1
position: 735245
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:735589:-1
position: 735589
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735245-735589:-1:exon

AWJ20_228
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_228
product: hypothetical protein
transcript id: XM_018879215.1
SIO_010081: AWJ20_228
subclass of: SO_0000673
so part of: AWJ20_228
location: complement(<735245..>735589)
location: region:735245-735589:-1
so has part: feature:735245-735589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:735245-735589:-1:exon

AWJ20_228
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_228
codon start: 1
product: hypothetical protein
translation: MFGLFEDSHNQVYNGQQHESKFSHELVAGAASFAAAKIFEDKQRKEGKPVSHQFAKEALAGIAGAEVDKLFESKGLNYLDKEKVKHQAQQNVQQGYDDHYGSQAQWDPNHPPSV
SIO_010081: AWJ20_228
subclass of: SO_0000673
so part of: AWJ20_228
location: complement(735245..735589)
location: region:735245-735589:-1
so has part: feature:735245-735589:-1:exon

XP_018734477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:735245-735589:-1:exon

AWJ20_229
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_229
so part of: sequence
location: complement(<738444..>740516)
location: region:738444-740516:-1
so has part: feature:738444-740516:-1:exon
subclass of: SO_0000010

30034184
type: Gene
SIO_000068: ncbigene

position:738444:-1
position: 738444
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:740516:-1
position: 740516
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738444-740516:-1:exon

AWJ20_229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_229
product: hypothetical protein
transcript id: XM_018879226.1
SIO_010081: AWJ20_229
subclass of: SO_0000673
so part of: AWJ20_229
location: complement(<738444..>740516)
location: region:738444-740516:-1
so has part: feature:738444-740516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738444-740516:-1:exon

AWJ20_229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_229
inference: similar to AA sequence:KEGG_Orthology:K01626
codon start: 1
product: hypothetical protein
translation: MGAGKEFRVDVVGPERLIASEGAKSAAKLRTLSSDQAGSDRPTGLTAVHPSGSAVDDGKAEWSPTSWQSHPIKQDVVYDDYSKVEKALEKLESLPPLVHPKEIEDLKSKLRDAAEGRAFVLQGGDCAELFDYCNQDRIEAKLKVLLQMSLVLIWGTKLPIVRIGRIAGQYAKPRSKQTEVVEGYGEIPSFRGDNINGYDPSDRTPDPSRLVSSYFHSAATLNFIRSTLASGFADLHHPFEWDLSHVRKDSIRNRYQQVVDNISEGLQFMSTVGGDNPAWQSIDLFTSHEALLLEYEQSFTRLLRDPTVKSTNGTTDTNSNSTRSSSANSAKKYYNTSAHFVWIGDRTRQLDGAHVEFFRGVANPIGIKVGPSTETDELVAVLDRVDPDFVPGRVTLITRYGADKIKDKLGEQIRAVKKSGHKVVWISDPCHGNTKTSPVSKLKTRYFDDIISEIRLALEIHKDNDSTLNGLHLELTGDPVTECIGGSQDLEDEDLVVRYETFCDPRLSLSQCKYHNLSPVPHTTTKLLLTHHSTGRRIPDRRLLPPGYPEGRLNKVFDKWYTVNKHNFVRPLCLRRLGSAPDPGCSSRSARVITSHLLLRDNCEWPLCLRRLGLRPRPWLLRPRPWLLLSLRSSRHAGSKTKTPAPPAKQEQPECEAEPQSPEATPASESIGSEQNRNYVNSRSTHRGPQ
SIO_010081: AWJ20_229
subclass of: SO_0000673
so part of: AWJ20_229
location: complement(738444..740516)
location: region:738444-740516:-1
so has part: feature:738444-740516:-1:exon

XP_018734478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:738444-740516:-1:exon

AWJ20_230
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_230
so part of: sequence
location: <741135..>741216
location: region:741135-741216:1
so has part: feature:741135-741216:1:exon
subclass of: SO_0000663

30034196
type: Gene
SIO_000068: ncbigene

position:741135:1
position: 741135
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:741216:1
position: 741216
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741135-741216:1:exon

AWJ20_230
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_230
product: tRNA-Ser
SIO_010081: AWJ20_230
subclass of: SO_0000673
so part of: AWJ20_230
location: <741135..>741216
location: region:741135-741216:1
so has part: feature:741135-741216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741135-741216:1:exon

AWJ20_231
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: LYS14
locus tag: AWJ20_231
so part of: sequence
location: complement(<741283..>742779)
location: region:741283-742779:-1
so has part: feature:741283-742779:-1:exon
subclass of: SO_0000010

30034207
type: Gene
SIO_000068: ncbigene

position:741283:-1
position: 741283
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:742779:-1
position: 742779
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741283-742779:-1:exon

AWJ20_231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: LYS14
locus tag: AWJ20_231
product: Lys14p
transcript id: XM_018879248.1
SIO_010081: AWJ20_231
subclass of: SO_0000673
so part of: AWJ20_231
location: complement(<741283..>742779)
location: region:741283-742779:-1
so has part: feature:741283-742779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741283-742779:-1:exon

AWJ20_231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: LYS14
locus tag: AWJ20_231
note: Transcriptional activator involved in regulating lysine biosynthesis; involved in the regulation of genes of the lysine biosynthesis pathway; requires 2-aminoadipate semialdehyde as co-inducer; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 10975256]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0000978 - RNA polymerase II core promoter proximal region sequence-specific DNA binding [Evidence IDA] [PMID 9701810]; GO_function: GO:0001077 - RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [Evidence ISA] [PMID 7935367]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19158363]; GO_function: GO:0000981 - sequence-specific DNA binding RNA polymerase II transcription factor activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0009085 - lysine biosynthetic process [Evidence IEA]; GO_process: GO:2001196 - positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine [Evidence IMP] [PMID 3123231]; GO_process: GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] [PMID 11952910]; GO_process: GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IMP] [PMID 3123231]; GO_process: GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] [PMID 7935367]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA,IEA]; GO_process: GO:0006366 - transcription from RNA polymerase II promoter [Evidence IEA]; GO_process: G…
codon start: 1
product: Lys14p
translation: MTITEPPPFFDEALLHDEDWISHAGLLATNLNDLVSMRLGEMSIDFSNSQNTIPPTELFMTEFVQDKSDIHHNVPVDYIKVSPKHQPYLNEFYHWFAKVILPFSAHFNGVDLNPVRDVLLTYAARERYLLLALLACGATSSHKKTSLAADELAYGEYLTTCIQSLEPIFNVETTLVSKIESILLTVLVLTSDHASSSNQNWRAHLQGAKELLLKYTSQSKQSHVLFLCKSWYSSIELLAALGAPNGGTLRSDRELELLISPDNPVEMKSLTQLHLYGPNGFSLLHGYSKQLVTLIRDMVKLLHKTRPWNDDRKSLPSGADNRSMDLISYKEVLRVLSGLYQQLDYTVGDPSPLNGLSSEAVEIVKQNNKQVSICWYDVSNKSYTLAALITMFTSVQGLSKHSPIVQGAVKELLSLVNFLDGRVESYGTFMLQLPMFVAGYNVIDDSDAAKIERFFKLLDELGAGSANHVLKKMKKVWGGAYSSEAATSGDDEKDILAY
SIO_010081: AWJ20_231
subclass of: SO_0000673
so part of: AWJ20_231
location: complement(741283..742779)
location: region:741283-742779:-1
so has part: feature:741283-742779:-1:exon

XP_018734479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:741283-742779:-1:exon

AWJ20_232
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_232
so part of: sequence
location: <743807..>743878
location: region:743807-743878:1
so has part: feature:743807-743878:1:exon
subclass of: SO_0000663

30034218
type: Gene
SIO_000068: ncbigene

position:743807:1
position: 743807
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:743878:1
position: 743878
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743807-743878:1:exon

AWJ20_232
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_232
product: tRNA-Met
SIO_010081: AWJ20_232
subclass of: SO_0000673
so part of: AWJ20_232
location: <743807..>743878
location: region:743807-743878:1
so has part: feature:743807-743878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743807-743878:1:exon

AWJ20_233
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_233
so part of: sequence
location: <743954..>744025
location: region:743954-744025:1
so has part: feature:743954-744025:1:exon
subclass of: SO_0000663

30034229
type: Gene
SIO_000068: ncbigene

position:743954:1
position: 743954
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:744025:1
position: 744025
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743954-744025:1:exon

AWJ20_233
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_233
product: tRNA-Met
SIO_010081: AWJ20_233
subclass of: SO_0000673
so part of: AWJ20_233
location: <743954..>744025
location: region:743954-744025:1
so has part: feature:743954-744025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743954-744025:1:exon

AWJ20_234
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: AVL9
locus tag: AWJ20_234
so part of: sequence
location: <745451..>748096
location: region:745451-748096:1
so has part: feature:745451-748096:1:exon
subclass of: SO_0000010

30034240
type: Gene
SIO_000068: ncbigene

position:745451:1
position: 745451
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:748096:1
position: 748096
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745451-748096:1:exon

AWJ20_234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: AVL9
locus tag: AWJ20_234
product: Avl9p
transcript id: XM_018879277.1
SIO_010081: AWJ20_234
subclass of: SO_0000673
so part of: AWJ20_234
location: <745451..>748096
location: region:745451-748096:1
so has part: feature:745451-748096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:745451-748096:1:exon

AWJ20_234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: AVL9
locus tag: AWJ20_234
note: Conserved protein involved in exocytic transport from the Golgi; mutation is synthetically lethal with apl2 vps1 double mutation; member of a protein superfamily with orthologs in diverse organisms; relocalizes from bud neck to cytoplasm upon DNA replication stress; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 22842922]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006892 - post-Golgi vesicle-mediated transport [Evidence IMP] [PMID 17229886]
codon start: 1
product: Avl9p
translation: MDHAHERIEEDHPDNEGDLEITGSNQVEPTRTEEEMDSENHPQRPTTIEEKNTNADEDINEQPEEDQEHSKSEELPENDVEPEEKDVENNGSLDTTDGVDNDGDNSEDNTDDADIQSDSHDDPSKRNSIPVPQTPSRSNKRENDNSPLSNVENIDTAPSTPNSRQDFQTPPSGDDGSPPDVIPGGFPLPKDEEESHTATSQSEEQDSTLIIEEAGSEDHSTFTDDHETIDLTGSPLSEKDRKDVNAADESNSNATYEPEEENNRHNETNGKIDGHEDVQDTNGNVQDNGNEMTVENGEENGEENGDENGDEDDDGYDDDEEEAEIIEVSSTQISDPYKDRRELKADKQDGNVLQSPERTSPQRSIASESSFSFSEENSTPGKKAAGTIDYGSYSKGPQDRLVSRLVSNFESQMDSATETPKVERRTFSKAKLKTIVSPISGSFPADVKEESRSILSGATALGPSALAANSSPPSAEPSDQSATKESETISQSASVNNDKPTQVELEHDEPVGPPVPNLQPIPKPKRITSFQLKPIEAVKEESSSEENLIFGVCVVGFHHARGPEVEYWVGPDGDKSSVWPYLAFQSLPDGSHVRDENFCYFTLLYDDEKKIAVNTTPKRDKDGHIIEQSDFKNVTTLFGISCNRQIKTEELKHVTDDITRSTVQKSVVVVARKPIFGPIKEKLAVVTRAYFIQGDFEDRQLIDNLYENLTQIFTYKLDDASMNIGMPLRELIYRLGPKVLVILKALMLEKRVLFFASNTELLCASQFSIVSLVPNLINNLEDCGSPLLSSYETNLKKPTSLRTSDRSSLLAFMGLPLQLFAGGGIFSPYVPLQQLSELHADETKYFLVGSTNSLVLSQQNTIADIIVNVSIMRSALRMVSK
SIO_010081: AWJ20_234
subclass of: SO_0000673
so part of: AWJ20_234
location: 745451..748096
location: region:745451-748096:1
so has part: feature:745451-748096:1:exon

XP_018734480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:745451-748096:1:exon

AWJ20_235
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: AVL9
locus tag: AWJ20_235
so part of: sequence
location: <748317..>749018
location: region:748317-749018:1
so has part: feature:748317-749018:1:exon
subclass of: SO_0000010

30034251
type: Gene
SIO_000068: ncbigene

position:748317:1
position: 748317
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:749018:1
position: 749018
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748317-749018:1:exon

AWJ20_235
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: AVL9
locus tag: AWJ20_235
product: Avl9p
transcript id: XM_018879288.1
SIO_010081: AWJ20_235
subclass of: SO_0000673
so part of: AWJ20_235
location: <748317..>749018
location: region:748317-749018:1
so has part: feature:748317-749018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:748317-749018:1:exon

AWJ20_235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: AVL9
locus tag: AWJ20_235
note: Conserved protein involved in exocytic transport from the Golgi; mutation is synthetically lethal with apl2 vps1 double mutation; member of a protein superfamily with orthologs in diverse organisms; relocalizes from bud neck to cytoplasm upon DNA replication stress; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 22842922]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006892 - post-Golgi vesicle-mediated transport [Evidence IMP] [PMID 17229886]
codon start: 1
product: Avl9p
translation: MHLLASVKYDTYLTKIGSKPAPMLARDITGNPLTLYNNNWAKEWKMSNNYRIFNKFTDEELFDIIEPKHLGESLSSNGANAREGIAKSVSKVFGNLWGTSPTGTTQASRSPTPKNEDNTSITGETSDGSDSKSLAESVETTSHKSQKSMSSTVSSTAEQPSQEGYFAGLARWAARRRQKVTSPQPNERAESIVEEQSTAEDESVSTPTDATATTSDPSLETGTTNQSTNDRNA
SIO_010081: AWJ20_235
subclass of: SO_0000673
so part of: AWJ20_235
location: 748317..749018
location: region:748317-749018:1
so has part: feature:748317-749018:1:exon

XP_018734481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748317-749018:1:exon

AWJ20_236
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RGP1
locus tag: AWJ20_236
so part of: sequence
location: complement(<749142..>751544)
location: region:749142-751544:-1
so has part: feature:749142-751544:-1:exon
subclass of: SO_0000010

30034262
type: Gene
SIO_000068: ncbigene

position:749142:-1
position: 749142
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:751544:-1
position: 751544
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749142-751544:-1:exon

AWJ20_236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RGP1
locus tag: AWJ20_236
product: Rgp1p
transcript id: XM_018879299.1
SIO_010081: AWJ20_236
subclass of: SO_0000673
so part of: AWJ20_236
location: complement(<749142..>751544)
location: region:749142-751544:-1
so has part: feature:749142-751544:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749142-751544:-1:exon

AWJ20_236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RGP1
locus tag: AWJ20_236
note: Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p); this complex catalyzes nucleotide exchange on Ypt6p; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA,IEA]; GO_component: GO:0005794 - Golgi apparatus [Evidence IDA] [PMID 10990452]; GO_component: GO:0000139 - Golgi membrane [Evidence IPI] [PMID 10990452]; GO_component: GO:0034066 - RIC1-RGP1 guanyl-nucleotide exchange factor complex [Evidence IPI] [PMID 10990452]; GO_component: GO:0032045 - guanyl-nucleotide exchange factor complex [Evidence IDA] [PMID 10990452]; GO_function: GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IDA,IPI] [PMID 10990452]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0007067 - mitotic nuclear division [Evidence IEA]; GO_process: GO:0043087 - regulation of GTPase activity [Evidence IEA]; GO_process: GO:0042147 - retrograde transport, endosome to Golgi [Evidence IPI] [PMID 10990452]; GO_process: GO:0042147 - retrograde transport, endosome to Golgi [Evidence IMP] [PMID 11082047]
codon start: 1
product: Rgp1p
translation: MPSSRSNIRVEVTFKNPVVFAGESLNAIVTFRNISVGESGLEEGGSSGYRGNNGQQGGGHQRYKSTIDASLSQKPRPHRKLGRSADLSNGKDPILEADSDNNHLNGNGTKNGLETDREAVSGSAHGSDGVPTEASSGIDSSVDSPVRENSRAALADDDDDSSWLSGRRLSMQLANSFREFYNGGNNSSTAITRSSTGLGRSASTATRGGSKLTRSSTGAGGRSGINASGDNGAISYQSSLAASRNNLALAGSQGLPPVNLLMGFAQLQGYFQVDDTIVSAEVFEHVKTQGIVVGHNGLEYKSGRGDTGLLRGLTSGLGSFGGFGSFFKSDDNPNSNPTARHGVSNSGSGANNGPSDIPIFSTPQSLLFVDLKLAPGESKSFSYQLNIPKTLPPSCRAKAISIYYNLVIGTQKLSSRGTPEPKIILVPFRVFPFVDSSGNQPSHNLHDPIVLKKDEAVITQLNERRPSVKSFEALEQKQRSPNTNQDSPAFKKCKEDFTNYLDDLLTNTEPLSGDTSLSDIKLGQESSRLLRHRSSLPVVGGQEEYTARENIDFFIKYYQQIQAQQSQASPQLALEMPNSDSQFDPPSISPPQLQPQLAPELKTSSMPQLTSHKVSFDINLHGHRIAFIYLSRPIYRIGEDIILVFDFTSSVLNCHHITATLETTEKLGADISLKSPQEVVSITRRIFSHTAISTFASSRTCLQFTIPSTGTPQFSTSDISLGWSIRIDFITSSHRLPDDQQSLLKHASPPSASSTVLRAKSALASETFSCRIPIQVYPTNQDIRALLDHHSGMMSRRWVI
SIO_010081: AWJ20_236
subclass of: SO_0000673
so part of: AWJ20_236
location: complement(749142..751544)
location: region:749142-751544:-1
so has part: feature:749142-751544:-1:exon

XP_018734482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749142-751544:-1:exon

AWJ20_237
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RRP45
locus tag: AWJ20_237
so part of: sequence
location: complement(<752076..>753038)
location: region:752076-753038:-1
so has part: feature:752076-753038:-1:exon
subclass of: SO_0000010

30034273
type: Gene
SIO_000068: ncbigene

position:752076:-1
position: 752076
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:753038:-1
position: 753038
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752076-753038:-1:exon

AWJ20_237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RRP45
locus tag: AWJ20_237
product: exosome non-catalytic core subunit RRP45
transcript id: XM_018879310.1
SIO_010081: AWJ20_237
subclass of: SO_0000673
so part of: AWJ20_237
location: complement(<752076..>753038)
location: region:752076-753038:-1
so has part: feature:752076-753038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752076-753038:-1:exon

AWJ20_237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RRP45
locus tag: AWJ20_237
inference: similar to AA sequence:KEGG_Orthology:K03678
note: Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp45p (PM/SCL-75, EXOSC9); protein abundance increases in response to DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0000177 - cytoplasmic exosome (RNase complex) [Evidence IDA] [PMID 10465791]; GO_component: GO:0000177 - cytoplasmic exosome (RNase complex) [Evidence IDA] [PMID 19046973]; GO_component: GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO_component: GO:0000176 - nuclear exosome (RNase complex) [Evidence IDA] [PMID 10465791]; GO_component: GO:0000176 - nuclear exosome (RNase complex) [Evidence IDA] [PMID 19046973]; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 16541108]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0034473 - U1 snRNA 3'-end processing [Evidence IGI,IMP] [PMID 10508172]; GO_process: GO:0034475 - U4 snRNA 3'-end processing [Evidence IGI,IMP] [PMID 10508172]; GO_process: GO:0034476 - U5 snRNA 3'-end processing [Evidence IGI,IMP] [PMID 10508172]; GO_process: GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 10465791]; GO_process: GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 10508172]; GO_process: GO:0070651 - nonfunctional rRNA decay [Evidence IC] [PMID 10465791]; GO_process: GO:0071042 - nuclear polyadenylation-dependent mRNA catabolic process [Evidence IC] [PMID 10465791]; GO_process: GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process [Evidence IMP] [PMID 10465791]; GO_…
codon start: 1
product: exosome non-catalytic core subunit RRP45
translation: MPKRKDISLNERQFILSLLKDSQRLDGRAIDQFRKVDLKFGDSLGHAEVQLGKTRLVVRVSAEVSKPYEDRPYEGTFIITTDVSSMASPLFENNRSSDDEMLMTRLIEKAIRRSNALDLESLCIVAGKSCWMIRADVHYLSYDGGLVDASCIGVIAALMHFRRPDTSIDGDQTIIHSVEERVPVPLSILHVPICVTFSFFKVDEVPSSTENPVAAIPGSGQSANGVPTADDSAILVIDATAQEEALRHSELTITINKNRDICQIAKPGGYSVEALTILECANKAYKIATNITDLIYRRLKEDESKRNAGNLVPLTAENER
SIO_010081: AWJ20_237
subclass of: SO_0000673
so part of: AWJ20_237
location: complement(752076..753038)
location: region:752076-753038:-1
so has part: feature:752076-753038:-1:exon

XP_018734483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:752076-753038:-1:exon

AWJ20_238
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TPO1
locus tag: AWJ20_238
so part of: sequence
location: complement(<753396..>755045)
location: region:753396-755045:-1
so has part: feature:753396-755045:-1:exon
subclass of: SO_0000010

30034284
type: Gene
SIO_000068: ncbigene

position:753396:-1
position: 753396
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:755045:-1
position: 755045
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753396-755045:-1:exon

AWJ20_238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TPO1
locus tag: AWJ20_238
product: Tpo1p
transcript id: XM_018879321.1
SIO_010081: AWJ20_238
subclass of: SO_0000673
so part of: AWJ20_238
location: complement(<753396..>755045)
location: region:753396-755045:-1
so has part: feature:753396-755045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753396-755045:-1:exon

AWJ20_238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TPO1
locus tag: AWJ20_238
note: Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; catalyzes uptake of polyamines at alkaline pH and excretion at acidic pH; during oxidative stress exports spermine, spermidine from the cell, which controls timing of expression of stress-responsive genes; phosphorylation enhances activity and sorting to the plasma membrane; GO_component: GO:0033101 - cellular bud membrane [Evidence IDA] [PMID 13679573]; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IMP] [PMID 11171066]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 12562762]; GO_component: GO:0005886 - plasma membrane [Evidence IDA,IMP] [PMID 15637075]; GO_function: GO:0015297 - antiporter activity [Evidence IEA]; GO_function: GO:0015606 - spermidine transmembrane transporter activity [Evidence IMP] [PMID 11171066]; GO_function: GO:0015606 - spermidine transmembrane transporter activity [Evidence IDA,IMP] [PMID 15637075]; GO_function: GO:0000297 - spermine transmembrane transporter activity [Evidence IMP] [PMID 11171066]; GO_function: GO:0000297 - spermine transmembrane transporter activity [Evidence IDA,IMP] [PMID 15637075]; GO_function: GO:0000297 - spermine transmembrane transporter activity [Evidence IMP] [PMID 9920864]; GO_process: GO:1902047 - polyamine transmembrane transport [Evidence IMP] [PMID 24136413]; GO_process: GO:0015847 - putrescine transport [Evidence IMP] [PMID 9920864]; GO_process: GO:0015848 - spermidine transport [Evidence IMP] [PMID 11171066]; GO_process: GO:0015848 - spermidine transport [Evidence IDA,IMP] [PMID 15637075]; GO_process: GO:0015848 - spermidine tra…
codon start: 1
product: Tpo1p
translation: MKISEVARVQTEFSDVESGLAYADARGEAENKPGELPGELRVSHSHRDNIFESFSGDHSEENNNTKSEFDVETFSTAPAEVTSESSTAEPTLLTAFERGDPDDPHNYPIWRKVCHSLVLVCMCFITAMSSAMYTPALVDIETKYNISRELALLSTGMVLVGYSFGPIIWSGVNEAFGRWYAWTVGFAIFLLFQIPTGLDPNFQTLLIGRFFQGFFGVSTLVTFGGAMSDVWDYSTRSYAAAAAVFAIFAAPALGPVISSFFIKWVSFGWISWIIIILGGVVLTLDILFIKETFPPVLLRNKAVKLRKEGHNVCAPLEAIPPTLKNLTTKYAIRPFIMLVEDKALGFLCVYAGISYGLLYTVLAALPVTFSTYRKFSFIPTYLPSISLLVGVAMTSTFISATNRNYVRALKMSGAMVLPDQRLKPMMLAAPLLPVGLFIFAWTAPFRHVHWIAPVIGSAIVGFSTSTIFISSISYMIESYKQYATSAFALNAIIRSLVAVLLLLVFSRMVEAMTLQGTFSFFGGVAILIAPGPFILHRNGDKWRKASKWA
SIO_010081: AWJ20_238
subclass of: SO_0000673
so part of: AWJ20_238
location: complement(753396..755045)
location: region:753396-755045:-1
so has part: feature:753396-755045:-1:exon

XP_018734484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:753396-755045:-1:exon

AWJ20_239
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ERG10
locus tag: AWJ20_239
so part of: sequence
location: <759571..>760761
location: region:759571-760761:1
so has part: feature:759571-760761:1:exon
subclass of: SO_0000010

30034295
type: Gene
SIO_000068: ncbigene

position:759571:1
position: 759571
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:760761:1
position: 760761
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759571-760761:1:exon

AWJ20_239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ERG10
locus tag: AWJ20_239
product: acetyl-CoA C-acetyltransferase
transcript id: XM_018879332.1
SIO_010081: AWJ20_239
subclass of: SO_0000673
so part of: AWJ20_239
location: <759571..>760761
location: region:759571-760761:1
so has part: feature:759571-760761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759571-760761:1:exon

AWJ20_239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ERG10
locus tag: AWJ20_239
inference: similar to AA sequence:KEGG_Orthology:K00626
note: Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase); cytosolic enzyme that transfers an acetyl group from one acetyl-CoA molecule to another, forming acetoacetyl-CoA; involved in the first step in mevalonate biosynthesis; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 5571830]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]; GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IDA] [PMID 7989303]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016746 - transferase activity, transferring acyl groups [Evidence IEA]; GO_function: GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups [Evidence IEA]; GO_process: GO:0006696 - ergosterol biosynthetic process [Evidence IMP] [PMID 200835]; GO_process: GO:0008152 - metabolic process [Evidence IEA]
codon start: 1
product: acetyl-CoA C-acetyltransferase
translation: MSRPAVYIVAASRTPIGSLLGSLASQTYVDLGAHAVKSALAKVPEIEPSAVEEIVFGNVYSANVGQAPARQVALKAGLSEATVATTINKVCASGLKAVIIGAQTILTGTADIVVAGGAESMSNVPHYLPSGRTGTKFGGATIVDGLQRDGLQDAYDGQAMGMAGEDTAAEHKISREEQDEYAINSYKRAQKAHADGKFKAEISPVELPGARGKPGVTVSVDEEVARLDEGRLKSARPVFKSDGSLTAPNSSPINDGAAAVILVSEQKVKELNLKPIAKILGWGDAAQAPIKFPTSPSLAVPKALKHANVAIEDVDFFEFNEAFSVVGVANSKILQLDPSKVNIYGGAVAIGHPLGASGARILVTLTSVLAQENGKIGVAAICNGGGGASAIVIERV
SIO_010081: AWJ20_239
subclass of: SO_0000673
so part of: AWJ20_239
location: 759571..760761
location: region:759571-760761:1
so has part: feature:759571-760761:1:exon

XP_018734485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:759571-760761:1:exon

AWJ20_240
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_240
so part of: sequence
location: complement(<760146..>760397)
location: region:760146-760397:-1
so has part: feature:760146-760397:-1:exon
subclass of: SO_0000010

30034307
type: Gene
SIO_000068: ncbigene

position:760146:-1
position: 760146
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:760397:-1
position: 760397
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760146-760397:-1:exon

AWJ20_240
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_240
product: hypothetical protein
transcript id: XM_018879344.1
SIO_010081: AWJ20_240
subclass of: SO_0000673
so part of: AWJ20_240
location: complement(<760146..>760397)
location: region:760146-760397:-1
so has part: feature:760146-760397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760146-760397:-1:exon

AWJ20_240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_240
codon start: 1
product: hypothetical protein
translation: MGLRFNSLTFCSETRITAAAPSLIGEELGAVREPSDLKTGLADLSLPSSRRATSSSTETVTPGLPRAPGSSTGLISALNLPSA
SIO_010081: AWJ20_240
subclass of: SO_0000673
so part of: AWJ20_240
location: complement(760146..760397)
location: region:760146-760397:-1
so has part: feature:760146-760397:-1:exon

XP_018734486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:760146-760397:-1:exon

AWJ20_241
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RPN10
locus tag: AWJ20_241
so part of: sequence
location: complement(<761087..>761872)
location: region:761087-761872:-1
so has part: feature:761087-761872:-1:exon
subclass of: SO_0000010

30034318
type: Gene
SIO_000068: ncbigene

position:761087:-1
position: 761087
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:761872:-1
position: 761872
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761087-761872:-1:exon

AWJ20_241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RPN10
locus tag: AWJ20_241
product: proteasome regulatory particle base subunit RPN10
transcript id: XM_018879351.1
SIO_010081: AWJ20_241
subclass of: SO_0000673
so part of: AWJ20_241
location: complement(<761087..>761872)
location: region:761087-761872:-1
so has part: feature:761087-761872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761087-761872:-1:exon

AWJ20_241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RPN10
locus tag: AWJ20_241
inference: similar to AA sequence:KEGG_Orthology:K03029
note: Non-ATPase base subunit of the 19S RP of the 26S proteasome; N-terminus plays a role in maintaining the structural integrity of the regulatory particle (RP); binds selectively to polyubiquitin chains; homolog of the mammalian S5a protein; GO_component: GO:0000502 - proteasome complex [Evidence IEA]; GO_component: GO:0000502 - proteasome complex [Evidence IMP] [PMID 15242647]; GO_component: GO:0008540 - proteasome regulatory particle, base subcomplex [Evidence IEA]; GO_component: GO:0008540 - proteasome regulatory particle, base subcomplex [Evidence IPI] [PMID 15907469]; GO_component: GO:0008540 - proteasome regulatory particle, base subcomplex [Evidence IDA] [PMID 9741626]; GO_function: GO:0031593 - polyubiquitin binding [Evidence IDA] [PMID 8887631]; GO_function: GO:0005198 - structural molecule activity [Evidence IMP] [PMID 9741626]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 15242647]
codon start: 1
product: proteasome regulatory particle base subunit RPN10
translation: MTLGGNGPEVKVTLCSEFGKILAGIHDTTVHGTNHLATSIQVAALALKHRQNKIQRQRVVVFVGSPIKEDSKELIKLAKKMKKNNVAVDFVNFGEEAENTEKLESFIEQVNSSDNSHLVTIPPGPHLLSDVLASSPIINEDSVGGGIPGGLGAGSGGAGAGSSSELFEFGVDPSVDPELALALRMSLEDEKARQEKEKEKAAASSSAAATIPEETASEVATAEASSSASAAPAANTEATNASEEAKESEENKPSQMDTSND
SIO_010081: AWJ20_241
subclass of: SO_0000673
so part of: AWJ20_241
location: complement(761087..761872)
location: region:761087-761872:-1
so has part: feature:761087-761872:-1:exon

XP_018734487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:761087-761872:-1:exon

AWJ20_242
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MRPL23
locus tag: AWJ20_242
so part of: sequence
location: complement(<764320..>764739)
location: region:764320-764739:-1
so has part: feature:764320-764739:-1:exon
subclass of: SO_0000010

30034329
type: Gene
SIO_000068: ncbigene

position:764320:-1
position: 764320
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:764739:-1
position: 764739
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764320-764739:-1:exon

AWJ20_242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MRPL23
locus tag: AWJ20_242
product: mitochondrial 54S ribosomal protein YmL23
transcript id: XM_018879362.1
SIO_010081: AWJ20_242
subclass of: SO_0000673
so part of: AWJ20_242
location: complement(<764320..>764739)
location: region:764320-764739:-1
so has part: feature:764320-764739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764320-764739:-1:exon

AWJ20_242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MRPL23
locus tag: AWJ20_242
inference: similar to AA sequence:KEGG_Orthology:K02871
note: Mitochondrial ribosomal protein of the large subunit; localizes to vacuole in response to H2O2; GO_component: GO:0000324 - fungal-type vacuole [Evidence IDA] [PMID 23509072]; GO_component: GO:0005762 - mitochondrial large ribosomal subunit [Evidence IPI] [PMID 12392552]; GO_component: GO:0005762 - mitochondrial large ribosomal subunit [Evidence IDA] [PMID 9151978]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA,IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IPI] [PMID 12392552]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IDA] [PMID 9151978]; GO_process: GO:0032543 - mitochondrial translation [Evidence IC] [PMID 12392552]; GO_process: GO:0032543 - mitochondrial translation [Evidence IC] [PMID 9151978]; GO_process: GO:0006412 - translation [Evidence IEA]
codon start: 1
product: mitochondrial 54S ribosomal protein YmL23
translation: MAKDPRTLGRLASAIAVTLMGKHKPVYHPSDDCGDYVVVTNCKYLNVTGEKMTQKLYRKHSGKPGHLKEWTMADLQNRKGGSEILRKAVSGMLPKNSLRKYRLARLKTVEDSQNPYADNIVATWEEGVKIVENAKKTTS
SIO_010081: AWJ20_242
subclass of: SO_0000673
so part of: AWJ20_242
location: complement(764320..764739)
location: region:764320-764739:-1
so has part: feature:764320-764739:-1:exon

XP_018734488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:764320-764739:-1:exon

AWJ20_243
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MET5
locus tag: AWJ20_243
so part of: sequence
location: complement(<765304..>769746)
location: region:765304-769746:-1
so has part: feature:765304-769746:-1:exon
subclass of: SO_0000010

30034340
type: Gene
SIO_000068: ncbigene

position:765304:-1
position: 765304
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:769746:-1
position: 769746
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765304-769746:-1:exon

AWJ20_243
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MET5
locus tag: AWJ20_243
product: sulfite reductase (NADPH) subunit beta
transcript id: XM_018879372.1
SIO_010081: AWJ20_243
subclass of: SO_0000673
so part of: AWJ20_243
location: complement(join(<765304..769658,769725..>769746))
location: region:765304-769746:-1
so has part: feature:769725-769746:-1:exon
so has part: feature:765304-769658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769725-769746:-1:exon

position:769725:-1
position: 769725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765304-769658:-1:exon

position:769658:-1
position: 769658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AWJ20_243
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MET5
locus tag: AWJ20_243
inference: similar to AA sequence:KEGG_Orthology:K00381
note: Sulfite reductase beta subunit; involved in amino acid biosynthesis, transcription repressed by methionine; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0009337 - sulfite reductase complex (NADPH) [Evidence IDA] [PMID 6751400]; GO_component: GO:0009337 - sulfite reductase complex (NADPH) [Evidence IDA] [PMID 9003798]; GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO_function: GO:0010181 - FMN binding [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0020037 - heme binding [Evidence IEA]; GO_function: GO:0005506 - iron ion binding [Evidence IEA]; GO_function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA,IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0004783 - sulfite reductase (NADPH) activity [Evidence IEA]; GO_function: GO:0004783 - sulfite reductase (NADPH) activity [Evidence IDA] [PMID 6751400]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0019344 - cysteine biosynthetic process [Evidence IEA]; GO_process: GO:0070814 - hydrogen sulfide biosynthetic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0009086 - methionine biosynthetic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0000103 - sulfate assimilation [Evidence IMP] [PMID 19236486]; GO_process: GO:0000097 - sulfur amino acid biosynthetic process [Evidence IMP] [PMID 1479340]
codon start: 1
product: sulfite reductase (NADPH) subunit beta
translation: MVTSYESETNKFVVANVLSSTGSKVFAIQPALAVKSKFSEDLEKKVSDLTVLRVNNDPFQTVVDYLESQQSSDVVSVTSSLTGLFKSLPHLTTLKKSPVTVHVDVSTESDYGLIAALRHSGFVFLQSFGPAEAQQTALISHLIAQKLSLPVVHFFYSNDDEEKVRLLTGAEIQKASSNTSFQPTQQEQAEETTETDENSAAPTAITQADISSTIEEAFKFTKTSYKPFEYIGSSKATSAIVLFAANADPFVQAINQDANLGVVLIRVYRPWSSEDLIGTLPSSVKRVGLVEQIQKQTTAWSPLFQDFVSDGVEKLSRFDHLVSFQLGGVNYDNVRTVLKSISSNLNAEVPIQKLFVGSKPESNDITYDAELKEAQTAAKKLEEAYTNVLHQLFPSSLDIINASDKPNAGLEANPEYGFGAYLAKVQQKEELVSKARAAIKSNDFTSPLKQELQTLLSQWIVANTSGKSNQSVDADKLIELLSKDGSSAAKQLLESKQYFKESSSWLIGSDAWSYDLGSSGVHHVISSGKNINMLVIDSQPFSEVKANALRKKDIGLYAMNFGNVYVASVAVYASYTQLLQALIEAEKFDGPSVVVAYLPYYSEHENALQVLQETKKAVETGYWPLYRYDPTLESESFKLDSFQIRKSLQDFLDRENKLTLLSKRHPTFARSLQSSYGADIKASQKKRAQAALASLLEGLSGPPLTVLFASDGGVAESVAKRLQRRAKGRGLKSIVMSFDDYPVEEISNEENVVFVTSTAGQGELPQNGRAFWDAVKNATDIDLANVNFGVFGLGDSHYWPRKEDKIYYNKPAKDLYNRLTILGGKELVPLGLGDDQDADGYSTAYNEWEPLLWKALGVDGVAGADEPPPITNEDIKIGSNFLRGTIAEGLQDKSTGAIAANDQQLTKFHGIYMQDDRDIRDERKAAGLEPAFSFMVRVRLPGCVASPAQWLKIDELSDKRGNGTFKITTRGTFQLHGVIKENLKPAIRGINSSLIDTVAACGDVNRNVVTAALPGNAKIHDEIVKIGTEISEHLLPETTAYHEIWLEGEDEGDGSDYTKTFAERKTGPKKKKTLVSAGTLVDYEPLYGPTYLPRKFKINIAVPPYNDVDVYGHDIGLIAIVEDNEVVGFNVLAGGGMGVTHNNKKTYPRTGSLLGYVEKANIVNVCEKVMLVQRDNGDRGNRKHARLKYTVDDLGVDTFRSKVEKLLGYKFEPGRDIHFDSNTDTFGWVTDETGKHHFTTFVENGRVEDTPELQFKTGLREVAKIMKGDNEFRLTANQHILISNISDDQLDQFKELLAKYKLDNVTFSGLRLSSAACVAFPTCGLAMAESERYLPVLVTKLEEALEEYGLRHDSIVLRMTGCPNGCARPWLAEVALVGKAYDTYNLLLGGGFHGQRINKLYRSSIKEDEILAILKPLFKRWALERNDGEHFGDFLIRVGVIAETTEGKNFWDNVPEEA
SIO_010081: AWJ20_243
subclass of: SO_0000673
so part of: AWJ20_243
location: complement(join(765304..769658,769725..769746))
location: region:765304-769746:-1
so has part: feature:769725-769746:-1:exon
so has part: feature:765304-769658:-1:exon

XP_018734489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:769725-769746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765304-769658:-1:exon

AWJ20_244
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_244
so part of: sequence
location: <771439..>772680
location: region:771439-772680:1
so has part: feature:771439-772680:1:exon
subclass of: SO_0000010

30034351
type: Gene
SIO_000068: ncbigene

position:771439:1
position: 771439
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:772680:1
position: 772680
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771439-772680:1:exon

AWJ20_244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_244
product: hypothetical protein
transcript id: XM_018879383.1
SIO_010081: AWJ20_244
subclass of: SO_0000673
so part of: AWJ20_244
location: <771439..>772680
location: region:771439-772680:1
so has part: feature:771439-772680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771439-772680:1:exon

AWJ20_244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_244
codon start: 1
product: hypothetical protein
translation: MLDLVLPAGIVIVLFYFIYNGLRHTIKPKIKSKQVETEEKPDDVCNLVPSPIGLTPEKLPFYNDRPWRPFRWPYHQTMSIRKLDINHWLDMDKWYVRYIKERKDILSKYKEKVFGYLPESEAASRELLETVVAHMLARYPKLFKLDTENPNRFHNLITGEVLDLKDEKLHPLEVAGRIAKEDFYIVQRRPDGRHYLTAMLVAFPGGFFANEENIGKHLDQIHTSVPYYQTKLQPSMERFFGKLKVNEPVERASFIIAYDKGLYTTKMHEHDPGNRYSHQSFDHVPHSKFGVRVERQALRRLPKTQAIIFTNHPIFYTFEEMKDEPMIPSILRNIIKDGPEKILPYKLYNVLEPYLGPYLESLIQRQIDMGIIKESDPVRTIPTYPFAHWIDTGPTEYGWTSPHQPDTAEPTAL
SIO_010081: AWJ20_244
subclass of: SO_0000673
so part of: AWJ20_244
location: 771439..772680
location: region:771439-772680:1
so has part: feature:771439-772680:1:exon

XP_018734490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:771439-772680:1:exon

AWJ20_245
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_245
so part of: sequence
location: <773653..>775821
location: region:773653-775821:1
so has part: feature:773653-775821:1:exon
subclass of: SO_0000010

30034362
type: Gene
SIO_000068: ncbigene

position:773653:1
position: 773653
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:775821:1
position: 775821
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773653-775821:1:exon

AWJ20_245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_245
product: NADH:ubiquinone oxidoreductase 78kD subunit
transcript id: XM_018879393.1
SIO_010081: AWJ20_245
subclass of: SO_0000673
so part of: AWJ20_245
location: <773653..>775821
location: region:773653-775821:1
so has part: feature:773653-775821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773653-775821:1:exon

AWJ20_245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_245
inference: similar to AA sequence:KEGG_Orthology:K03934
note: Neurospora crassa e-Compendium ncu01765.3
codon start: 1
product: NADH:ubiquinone oxidoreductase 78kD subunit
translation: MLSRVRLLGGRTGVSSSGIAGAGARRLLSSTAVRRAQVELTIDGKKVSIEAGSALIQACEKAGVTVPRYCYHEKLAIAGNCRMCLVDVERAPKPVASCAFPVAPGMVVRTDTERVKKAREGVTEMILANHPLDCPVCDQGGECDLQDQSLRYGSDRGRFKEIAGKRATEDKDIGPLVKTSMNRCIQCTRCIRFANDVAGAPELGSSGRGNEMQIGTYIEQNLKSELSGNVIDLCPVGALTSKPYAFKARPWELKKTETIDVFDALGSNIRVDSRGTAVMRVLPRLNDDINEEWISDKTRFAVDGLNTQRLTKPLIKVGDAFQDATWEDVLVTIQEKVKALNIKGDEFKAIAGDLVDVESLVALKDLTNKLGSENLALDHKGGNLPPAHGVDIRSNYLFNSSIRGIDQADVILLVGTNPRHEAAVLNARIRKQFLNSEVEIGLIGEEFDSTFWVENFGNDHASLVKALEGEFGKKLANAKNPLIITGSGVVENSDASAIFKTIGDFVVKHKNNFLTENWNGYNLLHRAASRAGAYEVGFAPPSAEIAKVTPKVVYLLGADEVQAQDIPKDAFVIYQGHHGDVGASFADVILPGAAYTEKSATYVNTEGRAQTTRAAVAPPGAAREDWKIIRAVADVLDVELPYDDIEQIRSRVADIAPNLVYYDVVEPSSLAEVGVKVQLVDNNHSATATGAPLTKVIDNFYFTDAISRSSPTMAKSSVAFNN
SIO_010081: AWJ20_245
subclass of: SO_0000673
so part of: AWJ20_245
location: 773653..775821
location: region:773653-775821:1
so has part: feature:773653-775821:1:exon

XP_018734491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:773653-775821:1:exon

AWJ20_246
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SPS19
locus tag: AWJ20_246
so part of: sequence
location: <778393..>779268
location: region:778393-779268:1
so has part: feature:778393-779268:1:exon
subclass of: SO_0000010

30034373
type: Gene
SIO_000068: ncbigene

position:778393:1
position: 778393
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:779268:1
position: 779268
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778393-779268:1:exon

AWJ20_246
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SPS19
locus tag: AWJ20_246
product: Sps19p
transcript id: XM_018879404.1
SIO_010081: AWJ20_246
subclass of: SO_0000673
so part of: AWJ20_246
location: <778393..>779268
location: region:778393-779268:1
so has part: feature:778393-779268:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778393-779268:1:exon

AWJ20_246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SPS19
locus tag: AWJ20_246
inference: similar to AA sequence:KEGG_Orthology:K13237
note: Peroxisomal 2,4-dienoyl-CoA reductase; auxiliary enzyme of fatty acid beta-oxidation; homodimeric enzyme required for growth and sporulation on petroselineate medium; expression induced during late sporulation and in the presence of oleate; GO_component: GO:0005782 - peroxisomal matrix [Evidence IDA] [PMID 9268358]; GO_component: GO:0005777 - peroxisome [Evidence IEA,IEA]; GO_function: GO:0008670 - 2,4-dienoyl-CoA reductase (NADPH) activity [Evidence IEA]; GO_function: GO:0008670 - 2,4-dienoyl-CoA reductase (NADPH) activity [Evidence IDA,ISS] [PMID 9268358]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0030437 - ascospore formation [Evidence IEP,IMP] [PMID 7969036]; GO_process: GO:0009062 - fatty acid catabolic process [Evidence IDA,ISS] [PMID 9268358]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]; GO_process: GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
codon start: 1
product: Sps19p
translation: MPNTLGQSYLQTSPWKKNLFDGKVVFVTGGAGSICRVEVEALVLLGANAAIIGRRKDVTEKAAEEIGQLRPGAKVIGIGGVDVRDVKSLASAVDTTVGQLGRIDFVIAGAAGNFLANVANLSANAFKTVVDIDLLGSYNTFKATFDELRKNKGHIIFISATLHYTGLPMQVHASAAKAGVDSLMRTLAVELGPLGIRSNAIAPGPIAGTEGMDRLSGKNDPNRFNRIPLQRYGTTTEIADATVYLFSDASSYITGTVTVVDGGSWQTGSVTASSAMYPTKITELNSKTAKL
SIO_010081: AWJ20_246
subclass of: SO_0000673
so part of: AWJ20_246
location: 778393..779268
location: region:778393-779268:1
so has part: feature:778393-779268:1:exon

XP_018734492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:778393-779268:1:exon

AWJ20_247
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_247
so part of: sequence
location: <779566..>779639
location: region:779566-779639:1
so has part: feature:779566-779639:1:exon
subclass of: SO_0000663

30034384
type: Gene
SIO_000068: ncbigene

position:779566:1
position: 779566
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:779639:1
position: 779639
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779566-779639:1:exon

AWJ20_247
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_247
product: tRNA-Val
SIO_010081: AWJ20_247
subclass of: SO_0000673
so part of: AWJ20_247
location: <779566..>779639
location: region:779566-779639:1
so has part: feature:779566-779639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779566-779639:1:exon

AWJ20_248
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: POX1
locus tag: AWJ20_248
so part of: sequence
location: <779945..>780619
location: region:779945-780619:1
so has part: feature:779945-780619:1:exon
subclass of: SO_0000010

30034395
type: Gene
SIO_000068: ncbigene

position:779945:1
position: 779945
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:780619:1
position: 780619
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779945-780619:1:exon

AWJ20_248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: POX1
locus tag: AWJ20_248
product: acyl-CoA oxidase
transcript id: XM_018879425.1
SIO_010081: AWJ20_248
subclass of: SO_0000673
so part of: AWJ20_248
location: <779945..>780619
location: region:779945-780619:1
so has part: feature:779945-780619:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779945-780619:1:exon

AWJ20_248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: POX1
locus tag: AWJ20_248
inference: similar to AA sequence:KEGG_Orthology:K00232
note: Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; GO_component: GO:0005782 - peroxisomal matrix [Evidence IDA] [PMID 11967269]; GO_component: GO:0005777 - peroxisome [Evidence IEA,IEA,IEA]; GO_function: GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]; GO_function: GO:0003997 - acyl-CoA oxidase activity [Evidence IEA,IEA]; GO_function: GO:0003997 - acyl-CoA oxidase activity [Evidence ISA] [PMID 2189786]; GO_function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]; GO_process: GO:0006635 - fatty acid beta-oxidation [Evidence IEA]; GO_process: GO:0006635 - fatty acid beta-oxidation [Evidence IMP] [PMID 12819196]; GO_process: GO:0033540 - fatty acid beta-oxidation using acyl-CoA oxidase [Evidence IEA]; GO_process: GO:0033540 - fatty acid beta-oxidation using acyl-CoA oxidase [Evidence ISA] [PMID 2189786]; GO_process: GO:0006631 - fatty acid metabolic process [Evidence IEA,IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: acyl-CoA oxidase
translation: MALNSAVLPNATSNVVIGGIHYDTTTEPPRALAEERKNVTFNVRDMSYFIDGSKEVTERFEDFMNQIERDPLFSNDAFYDLTLDKKRELTMARVAQAFKYMDKYKTTKERADLLLVIGLADPSVNTRMFVHFNLFLSGVQGSGTDAQLKYWASRGAVTGHKFYGCFAMTEAGHGSNVAGLETTAVFDEATDEFVINTPNQAAAKVSLYHDFIRNWSPRYDLPPL
SIO_010081: AWJ20_248
subclass of: SO_0000673
so part of: AWJ20_248
location: 779945..780619
location: region:779945-780619:1
so has part: feature:779945-780619:1:exon

XP_018734493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:779945-780619:1:exon

AWJ20_249
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: POX1
locus tag: AWJ20_249
so part of: sequence
location: <780800..>782134
location: region:780800-782134:1
so has part: feature:780800-782134:1:exon
subclass of: SO_0000010

30034406
type: Gene
SIO_000068: ncbigene

position:780800:1
position: 780800
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:782134:1
position: 782134
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780800-782134:1:exon

AWJ20_249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: POX1
locus tag: AWJ20_249
product: acyl-CoA oxidase
transcript id: XM_018879436.1
SIO_010081: AWJ20_249
subclass of: SO_0000673
so part of: AWJ20_249
location: <780800..>782134
location: region:780800-782134:1
so has part: feature:780800-782134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780800-782134:1:exon

AWJ20_249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: POX1
locus tag: AWJ20_249
inference: similar to AA sequence:KEGG_Orthology:K00232
note: Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; GO_component: GO:0005782 - peroxisomal matrix [Evidence IDA] [PMID 11967269]; GO_component: GO:0005777 - peroxisome [Evidence IEA,IEA,IEA]; GO_function: GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]; GO_function: GO:0003997 - acyl-CoA oxidase activity [Evidence IEA,IEA]; GO_function: GO:0003997 - acyl-CoA oxidase activity [Evidence ISA] [PMID 2189786]; GO_function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]; GO_process: GO:0006635 - fatty acid beta-oxidation [Evidence IEA]; GO_process: GO:0006635 - fatty acid beta-oxidation [Evidence IMP] [PMID 12819196]; GO_process: GO:0033540 - fatty acid beta-oxidation using acyl-CoA oxidase [Evidence IEA]; GO_process: GO:0033540 - fatty acid beta-oxidation using acyl-CoA oxidase [Evidence ISA] [PMID 2189786]; GO_process: GO:0006631 - fatty acid metabolic process [Evidence IEA,IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: acyl-CoA oxidase
translation: MGRDGVDNGWITFSNVRIPRTFMMMRFARVDKNGNVTQPPLAQLAYGALIGGRVSMAADSFQVAKKFITIAVRYGAARRQFSSEDGQPETKLLDYTYHQRRLLPLLAYTYAMRTAADGLYDMYYNATEKLANTNVSDKQGLQSAIEDIKELFSLSAGLKAFSTWGCGHIIDEARQSCGGHGYSSYNAFGPGYADWIVNTIWEGDNNVLTLSAGRALVQSGVALRKGKRLGGPVEYLSRSEELKNAGLGSNHDSALRDPATIIKSWESICSQAINSTVDKFLELTQKENLSLTQAFEQLSLQRFQIARIHTRLYVIRSFFERVEKTQDGPLKKAVLDVALLFALWSIENESGIFLKYNFFTPDDLDTITELVNEYCRKVRVNAIGLTDAFNLSDYYINSAIGNYNGDFYKSYFEKVTRRNPPEEIRPPYYDSLMRPFFDRTNDEA
SIO_010081: AWJ20_249
subclass of: SO_0000673
so part of: AWJ20_249
location: 780800..782134
location: region:780800-782134:1
so has part: feature:780800-782134:1:exon

XP_018734494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:780800-782134:1:exon

AWJ20_250
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_250
so part of: sequence
location: <782876..>783643
location: region:782876-783643:1
so has part: feature:782876-783643:1:exon
subclass of: SO_0000010

30034418
type: Gene
SIO_000068: ncbigene

position:782876:1
position: 782876
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:783643:1
position: 783643
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782876-783643:1:exon

AWJ20_250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_250
product: hypothetical protein
transcript id: XM_018879448.1
SIO_010081: AWJ20_250
subclass of: SO_0000673
so part of: AWJ20_250
location: <782876..>783643
location: region:782876-783643:1
so has part: feature:782876-783643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:782876-783643:1:exon

AWJ20_250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_250
codon start: 1
product: hypothetical protein
translation: MRLHIKYLISLYRAINNPRLSILAIDYSLAPEVVFPAALTEIATVYSELVDHDGCNNIILSGDSAGGNLCIVLSAHLKHHYEDLSVPSRYVQPIAEVLISPWVELDPVLQGSYVSNKDSDVLGGSFLKEVSKLYCPDNKLQQSPFVNPARSKPEFWEGVFPEKTLVTFGQNEIMRDDIIKFARIASIEHRYGDIGGFHCSVLSAKNYDQNKLFNGIVSFIQRSLQQTVGLAAGEATAVDIEALESRNKVMRTSKL
SIO_010081: AWJ20_250
subclass of: SO_0000673
so part of: AWJ20_250
location: 782876..783643
location: region:782876-783643:1
so has part: feature:782876-783643:1:exon

XP_018734495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:782876-783643:1:exon

AWJ20_251
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HOL1
locus tag: AWJ20_251
so part of: sequence
location: complement(<783732..>784652)
location: region:783732-784652:-1
so has part: feature:783732-784652:-1:exon
subclass of: SO_0000010

30034429
type: Gene
SIO_000068: ncbigene

position:783732:-1
position: 783732
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:784652:-1
position: 784652
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783732-784652:-1:exon

AWJ20_251
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HOL1
locus tag: AWJ20_251
product: Hol1p
transcript id: XM_018879458.1
SIO_010081: AWJ20_251
subclass of: SO_0000673
so part of: AWJ20_251
location: complement(<783732..>784652)
location: region:783732-784652:-1
so has part: feature:783732-784652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783732-784652:-1:exon

AWJ20_251
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HOL1
locus tag: AWJ20_251
note: Putative transporter in the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005886 - plasma membrane [Evidence ISS] [PMID 8955402]; GO_function: GO:0015665 - alcohol transmembrane transporter activity [Evidence IMP] [PMID 2405251]; GO_function: GO:0022890 - inorganic cation transmembrane transporter activity [Evidence IMP] [PMID 8955402]; GO_process: GO:0006812 - cation transport [Evidence IMP] [PMID 8955402]; GO_process: GO:0015850 - organic hydroxy compound transport [Evidence IMP] [PMID 2405251]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Hol1p
translation: MPETKWERGRKADVIQVSNEKETTSTIEDSSSVSKPGAEVSDNQAGTYMLDDFLYKGRPHRRQFGLLFHNKEESIFSILKLFWIPVKLCSYPIIVWASIVYSGCASLFLMINMTQSANFAAPPYNFSPSAVGYTNFAVLGGLVIGLFTAGPFSDWICKFSTKRNGNVREPEMRLPALIPFAIIATVGTVIITVGYTQKWDWPVIVILGYGCIGLQTSSIMGIVSTYAVDGYVNASGSIFVLASIFKDVYGYGVSKYLPPMIPEKGYTTSIMVVYAVAIGPLALAVVMYFIGKPLRRLSRNSSVHHM
SIO_010081: AWJ20_251
subclass of: SO_0000673
so part of: AWJ20_251
location: complement(783732..784652)
location: region:783732-784652:-1
so has part: feature:783732-784652:-1:exon

XP_018734496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:783732-784652:-1:exon

AWJ20_252
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_252
so part of: sequence
location: complement(<785009..>785449)
location: region:785009-785449:-1
so has part: feature:785009-785449:-1:exon
subclass of: SO_0000010

30034440
type: Gene
SIO_000068: ncbigene

position:785009:-1
position: 785009
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:785449:-1
position: 785449
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785009-785449:-1:exon

AWJ20_252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_252
product: hypothetical protein
transcript id: XM_018879468.1
SIO_010081: AWJ20_252
subclass of: SO_0000673
so part of: AWJ20_252
location: complement(<785009..>785449)
location: region:785009-785449:-1
so has part: feature:785009-785449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785009-785449:-1:exon

AWJ20_252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_252
codon start: 1
product: hypothetical protein
translation: MLRDVDLEHQLEEDVQNELHIDLPPGTELMHDVGHIHFAKKGNTVLIPQPDNNPNDPLNWSKPWKYSILIGSSLLSFIHQIGGLSIAPQVPFYVEEFNRSADDVLLLTGVYILLMGLSTWFWIPISEKYGRRIVILSVSQNIFDIL
SIO_010081: AWJ20_252
subclass of: SO_0000673
so part of: AWJ20_252
location: complement(785009..785449)
location: region:785009-785449:-1
so has part: feature:785009-785449:-1:exon

XP_018734497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:785009-785449:-1:exon

AWJ20_253
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CDC43
locus tag: AWJ20_253
so part of: sequence
location: <786833..>787966
location: region:786833-787966:1
so has part: feature:786833-787966:1:exon
subclass of: SO_0000010

30034451
type: Gene
SIO_000068: ncbigene

position:786833:1
position: 786833
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:787966:1
position: 787966
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786833-787966:1:exon

AWJ20_253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CDC43
locus tag: AWJ20_253
product: protein geranylgeranyltransferase type I subunit CDC43
transcript id: XM_018879479.1
SIO_010081: AWJ20_253
subclass of: SO_0000673
so part of: AWJ20_253
location: <786833..>787966
location: region:786833-787966:1
so has part: feature:786833-787966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786833-787966:1:exon

AWJ20_253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CDC43
locus tag: AWJ20_253
inference: similar to AA sequence:KEGG_Orthology:K11713
note: Beta subunit of geranylgeranyltransferase type I; catalyzes geranylgeranylation to the cysteine residue in proteins containing a C-terminal CaaX sequence ending in Leu or Phe; has substrates important for morphogenesis; GO_component: GO:0005953 - CAAX-protein geranylgeranyltransferase complex [Evidence IDA] [PMID 1400380]; GO_component: GO:0005622 - intracellular [Evidence TAS] [PMID 9891811]; GO_function: GO:0004662 - CAAX-protein geranylgeranyltransferase activity [Evidence IEA]; GO_function: GO:0004662 - CAAX-protein geranylgeranyltransferase activity [Evidence IDA] [PMID 1400380]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0004659 - prenyltransferase activity [Evidence IEA]; GO_function: GO:0004661 - protein geranylgeranyltransferase activity [Evidence IDA] [PMID 10066831]; GO_function: GO:0004661 - protein geranylgeranyltransferase activity [Evidence IDA] [PMID 2034682]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0006874 - cellular calcium ion homeostasis [Evidence TAS] [PMID 9891811]; GO_process: GO:0030010 - establishment of cell polarity [Evidence TAS] [PMID 9891811]; GO_process: GO:0018344 - protein geranylgeranylation [Evidence IDA] [PMID 2034682]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence TAS] [PMID 9891811]
codon start: 1
product: protein geranylgeranyltransferase type I subunit CDC43
translation: MPSAYTSYDSSHVSLVYFCIAGLKLLNALTEVIPNETDRSNWIEWVYLHLTPSGNGFRGSLSHDLQQSTTLDGDNINDPAHLASTFFCLSILAILQDRSMTTRLDRVKILRYVKSCQRSTGQFSGLSHPSIGPVGDNDPRYTYVAAAIRRILKGDQLHETLKAEVDFNVKKASDFIKSTKSYDGGLGDKQGSESHAGLVFCGIAALDLMNTLNCKDWVDTAVWLSKRQLSEFTIDHSYSITADGDYDQHSRDNDTRHGASSFCCWNSWEAGGFNGRLNKPADTCYAYWTCASLTVLNSANFVSSPAARTFLLENCMDPVLGGMVKVKGSYADPLHSYLGLAALAMISPELGFCEFNPSLTLPVETVSFIDTLDWNPL
SIO_010081: AWJ20_253
subclass of: SO_0000673
so part of: AWJ20_253
location: 786833..787966
location: region:786833-787966:1
so has part: feature:786833-787966:1:exon

XP_018734498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:786833-787966:1:exon

AWJ20_254
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_254
so part of: sequence
location: complement(<788069..>788150)
location: region:788069-788150:-1
so has part: feature:788069-788150:-1:exon
subclass of: SO_0000663

30034462
type: Gene
SIO_000068: ncbigene

position:788069:-1
position: 788069
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:788150:-1
position: 788150
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788069-788150:-1:exon

AWJ20_254
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_254
product: tRNA-Ser
SIO_010081: AWJ20_254
subclass of: SO_0000673
so part of: AWJ20_254
location: complement(<788069..>788150)
location: region:788069-788150:-1
so has part: feature:788069-788150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788069-788150:-1:exon

AWJ20_255
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RNT1
locus tag: AWJ20_255
so part of: sequence
location: <790117..>791385
location: region:790117-791385:1
so has part: feature:790117-791385:1:exon
subclass of: SO_0000010

30034473
type: Gene
SIO_000068: ncbigene

position:790117:1
position: 790117
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:791385:1
position: 791385
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790117-791385:1:exon

AWJ20_255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RNT1
locus tag: AWJ20_255
product: Rnt1p
transcript id: XM_018879498.1
SIO_010081: AWJ20_255
subclass of: SO_0000673
so part of: AWJ20_255
location: <790117..>791385
location: region:790117-791385:1
so has part: feature:790117-791385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:790117-791385:1:exon

AWJ20_255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RNT1
locus tag: AWJ20_255
inference: similar to AA sequence:KEGG_Orthology:K03685
note: Nuclear dsRNA-specific ribonuclease (RNase III); involved in rDNA transcription, rRNA processing and U2 snRNA 3' end formation by cleavage of a stem-loop structure at the 3' end of U2 snRNA; involved in polyadenylation-independent transcription termination; involved in the cell wall stress response, regulating the degradation of cell wall integrity and morphogenesis checkpoint genes; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 15090619]; GO_component: GO:0005654 - nucleoplasm [Evidence IDA] [PMID 15090619]; GO_function: GO:0003723 - RNA binding [Evidence IEA,IEA]; GO_function: GO:0004519 - endonuclease activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0004518 - nuclease activity [Evidence IEA]; GO_function: GO:0004525 - ribonuclease III activity [Evidence IEA,IEA]; GO_function: GO:0004525 - ribonuclease III activity [Evidence IDA] [PMID 15766245]; GO_process: GO:0090501 - RNA phosphodiester bond hydrolysis [Evidence IEA,IEA]; GO_process: GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic [Evidence IEA,IEA]; GO_process: GO:0006396 - RNA processing [Evidence IEA]; GO_process: GO:0034473 - U1 snRNA 3'-end processing [Evidence IMP] [PMID 10508172]; GO_process: GO:0034475 - U4 snRNA 3'-end processing [Evidence IMP] [PMID 10508172]; GO_process: GO:0034476 - U5 snRNA 3'-end processing [Evidence IMP] [PMID 10508172]; GO_process: GO:0034963 - box C/D snoRNA processing [Evidence IMP] [PMID 23201338]; GO_process: GO:0034964 - box H/ACA snoRNA processing [Evidence IMP] [PMID 23201338]; GO_process: GO:0006325 - chromatin organization [Evidence IMP] [PMID 17991894]; GO_process: GO:0006379 - mRNA cleavage [Evidence IDA,IMP] [PMID 17158880]; GO_process: GO:0016075 - rRNA catabolic process [Evidence IEA]; GO_process: GO:0006364 - rRNA processing [Evidence IMP] [PMID 17991894]; GO_process: GO:0009303 - rRNA transcription [Evidence IMP] [PMID 17991894]; GO_process: GO:0060237 - regulation of fungal-type ce…
codon start: 1
product: Rnt1p
translation: MSREFSTKNFFTSIALEIVLKLPENSAEEMLYWPPLTSAYPLKEEEEYERESELVTNGSEVNGLFGDSSDHDGLKNVNGARKADEAGETYEALKIKSKRDKNDRLEVFDKKTNQSKTIRRRGQSEKIRLCGLEKSDGVYDANDVHERAKELEEIVDNGMNYSTQSRSKSTNNESTPTGNLSLRPSRVSDLPSMVTTPLEVLEHGISSNSSNEPKTMDYDGYHIVTSHTNVPESPASPEWKWPPRLPLLSQERVERQVYAQKPLPDSNEFQSLVVSSMFYKNNRRLKYLGKSILDFTMSALIFERFQKATSTEMRIFKKKLLNQRQIEKWSRIYEFHHYVDVDHEFKLGQMEWQAPDYEADPSGNTWYSKPQDEDISPLQDAFEAYVGAIYLDPCLGPEAIKSWLSLLAEPILSGKEEPSSWE
SIO_010081: AWJ20_255
subclass of: SO_0000673
so part of: AWJ20_255
location: 790117..791385
location: region:790117-791385:1
so has part: feature:790117-791385:1:exon

XP_018734499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:790117-791385:1:exon

AWJ20_256
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: IES6
locus tag: AWJ20_256
so part of: sequence
location: <791751..>792131
location: region:791751-792131:1
so has part: feature:791751-792131:1:exon
subclass of: SO_0000010

30034484
type: Gene
SIO_000068: ncbigene

position:791751:1
position: 791751
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:792131:1
position: 792131
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791751-792131:1:exon

AWJ20_256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: IES6
locus tag: AWJ20_256
product: Ies6p
transcript id: XM_018879509.1
SIO_010081: AWJ20_256
subclass of: SO_0000673
so part of: AWJ20_256
location: <791751..>792131
location: region:791751-792131:1
so has part: feature:791751-792131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791751-792131:1:exon

AWJ20_256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: IES6
locus tag: AWJ20_256
inference: similar to AA sequence:KEGG_Orthology:K11667
note: Component of the INO80 chromatin remodeling complex; critical for INO80 function; involved in regulation of chromosome segregation and maintenance of normal centromeric chromatin structure; human ortholog INO80C is a member of the human INO80 complex; implicated in DNA repair based on genetic interactions with RAD52 epistasis genes; GO_component: GO:0031011 - Ino80 complex [Evidence IPI] [PMID 24034245]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0006338 - chromatin remodeling [Evidence IMP] [PMID 23207916]; GO_process: GO:0051983 - regulation of chromosome segregation [Evidence IMP] [PMID 23207916]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Ies6p
translation: MSSASESPSLIEQADFSTVPKPFKSESWKQSNKRYKNLKALVTDEQKRLASLPPSDDKATYFSIEAPPSLRPQKHWCDITGLPGRYKSARHGLRFYNVEIFKAIDEMAPGADQQYLSLRNANVILR
SIO_010081: AWJ20_256
subclass of: SO_0000673
so part of: AWJ20_256
location: 791751..792131
location: region:791751-792131:1
so has part: feature:791751-792131:1:exon

XP_018734500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:791751-792131:1:exon

AWJ20_257
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TAD3
locus tag: AWJ20_257
so part of: sequence
location: complement(<796540..>797376)
location: region:796540-797376:-1
so has part: feature:796540-797376:-1:exon
subclass of: SO_0000010

30034495
type: Gene
SIO_000068: ncbigene

position:796540:-1
position: 796540
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:797376:-1
position: 797376
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796540-797376:-1:exon

AWJ20_257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TAD3
locus tag: AWJ20_257
product: Tad3p
transcript id: XM_018879520.1
SIO_010081: AWJ20_257
subclass of: SO_0000673
so part of: AWJ20_257
location: complement(<796540..>797376)
location: region:796540-797376:-1
so has part: feature:796540-797376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796540-797376:-1:exon

AWJ20_257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TAD3
locus tag: AWJ20_257
note: Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IDA] [PMID 10550050]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006400 - tRNA modification [Evidence IDA] [PMID 10550050]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]
codon start: 1
product: Tad3p
translation: MWRGNPNAIRNEITSNEVEAMRKHLKSLVQLSKQHAPGELPISTLIVDPETDTVVVSNSDARHSNGNPINHSIMVALYDAAILEAERRRQLSAERSSRSSSLRPDEVNSRASTPSLNVNNINNSQSLNGTTTISCATTTTVTSTTIDNLHNTDLSPPGLMTASSASVSSASTLNTLDQLSPDDKNYLCLNMHVYTTHEPCPMCAMALVHSRIARLIYIKPSPKTGAIEPTSGASYGVHWNKLLNWKYEAWRWQADGYLATDDDKLISSVEDISPDING
SIO_010081: AWJ20_257
subclass of: SO_0000673
so part of: AWJ20_257
location: complement(796540..797376)
location: region:796540-797376:-1
so has part: feature:796540-797376:-1:exon

XP_018734501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:796540-797376:-1:exon

AWJ20_258
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SOD1
locus tag: AWJ20_258
so part of: sequence
location: complement(<803537..>804172)
location: region:803537-804172:-1
so has part: feature:803537-804172:-1:exon
subclass of: SO_0000010

30034506
type: Gene
SIO_000068: ncbigene

position:803537:-1
position: 803537
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:804172:-1
position: 804172
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803537-804172:-1:exon

AWJ20_258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SOD1
locus tag: AWJ20_258
product: superoxide dismutase SOD1
transcript id: XM_018879529.1
SIO_010081: AWJ20_258
subclass of: SO_0000673
so part of: AWJ20_258
location: complement(<803537..>804172)
location: region:803537-804172:-1
so has part: feature:803537-804172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803537-804172:-1:exon

AWJ20_258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SOD1
locus tag: AWJ20_258
inference: similar to AA sequence:KEGG_Orthology:K04565
note: Cytosolic copper-zinc superoxide dismutase; detoxifies superoxide; stabilizes Yck1p and Yck2p kinases in glucose to repress respiration; phosphorylated by Dun1p and enters the nucleus under oxidative stress to promote transcription of stress response genes; human ortholog implicated in ALS; abundance increases under DNA replication stress and during exposure to boric acid; localization of a fraction to the mitochondrial intermembrane space is modulated by the MICOS complex; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 11500508]; GO_component: GO:0005758 - mitochondrial intermembrane space [Evidence IEA]; GO_component: GO:0005758 - mitochondrial intermembrane space [Evidence IDA] [PMID 11500508]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 18977757]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 24647101]; GO_function: GO:0016209 - antioxidant activity [Evidence IEA]; GO_function: GO:0005507 - copper ion binding [Evidence IBA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA,IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0004784 - superoxide dismutase activity [Evidence IEA,IEA]; GO_function: GO:0004784 - superoxide dismutase activity [Evidence IDA] [PMID 3290902]; GO_function: GO:0008270 - zinc ion binding [Evidence IBA]; GO_process: GO:0001320 - age-dependent response to reactive oxygen species involved in chronological cell aging [Evidence IMP] [PMID 8647826]; GO_process: GO:0006878 - cellular copper ion homeostasis [Evidence IMP] [PMID 8530401]; GO_process: GO:0006882 - cellular zinc ion homeostasis [Evidence IMP] [PMID 11581253]; GO_process: GO:0031505 - fungal-type cell wall organization [Evidence IMP] [PMID 20176017]; GO_process: GO:1901856 - negative regulation of cellular respiration [Evidenc…
codon start: 1
product: superoxide dismutase SOD1
translation: MLGVKWLCLPSSNRLEHPAETPADWTARHVDSSEARGATRSGAAPQPPEAHPLQELNANRAVAVLRGDSDVKGVVHFEQTSEDEYATVSWEITGNDKNALRGFHIHQFGDNTNGCTSAGPHFNPLKKEHGAPEDENRHVGDLGNITTDANGVSKGSKKDLLIKLFGENSIIGRTVVVHAGTDDLGKGGHADSLTTGNAGGRNACGVIGVSN
SIO_010081: AWJ20_258
subclass of: SO_0000673
so part of: AWJ20_258
location: complement(803537..804172)
location: region:803537-804172:-1
so has part: feature:803537-804172:-1:exon

XP_018734502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:803537-804172:-1:exon

AWJ20_259
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_259
so part of: sequence
location: <807445..>808455
location: region:807445-808455:1
so has part: feature:807445-808455:1:exon
subclass of: SO_0000010

30034517
type: Gene
SIO_000068: ncbigene

position:807445:1
position: 807445
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:808455:1
position: 808455
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807445-808455:1:exon

AWJ20_259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_259
product: Pc12g14970
transcript id: XM_018879540.1
SIO_010081: AWJ20_259
subclass of: SO_0000673
so part of: AWJ20_259
location: <807445..>808455
location: region:807445-808455:1
so has part: feature:807445-808455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807445-808455:1:exon

AWJ20_259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_259
codon start: 1
product: Pc12g14970
translation: MGQVKTLEDLPSYNQLPNKQRFWEWGPPGSHEEGLGKQNLLTPEHVAKSAKSEIKTGDRIGLGWEMHKLEYPAFGRKHFDLKIDARSEFSLDDIYEFNPQQSSQWDGFRHYQQPVAFSGADEDKQKGKVDGLWFGGASRSEITEKGSTRIGVHHWAQQGIVGRGVLIDYATYAEEKGIKYSCFEPNIITHADLQGAIKRFNVDIQPADIVFIRIGLPREWDKYSDEEKKAIQERPPEFMGLEPSQDNLSWIWDNHFPAVASDAIALEVLPKGGYPNGLPMHQHLLAGWGVTIGEIFNLEPLAELCKKLNRYSFFVASVPLNAVGAVSTPPNAVAIF
SIO_010081: AWJ20_259
subclass of: SO_0000673
so part of: AWJ20_259
location: 807445..808455
location: region:807445-808455:1
so has part: feature:807445-808455:1:exon

XP_018734503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:807445-808455:1:exon

AWJ20_260
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_260
so part of: sequence
location: complement(<809303..>809662)
location: region:809303-809662:-1
so has part: feature:809303-809662:-1:exon
subclass of: SO_0000010

30034529
type: Gene
SIO_000068: ncbigene

position:809303:-1
position: 809303
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:809662:-1
position: 809662
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809303-809662:-1:exon

AWJ20_260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_260
product: hypothetical protein
transcript id: XM_018879552.1
SIO_010081: AWJ20_260
subclass of: SO_0000673
so part of: AWJ20_260
location: complement(<809303..>809662)
location: region:809303-809662:-1
so has part: feature:809303-809662:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809303-809662:-1:exon

AWJ20_260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_260
codon start: 1
product: hypothetical protein
translation: MVLAEEVVHFRYHYHLQLPLSHLYIHIFDRHIPDSETVALDASVPAEAVVVGIYQTHLAVDTDTLADTLADTLLDTPVDTAADTPVDTSVDTPVDTPVDTPAVDAPAVDAAANAAVRTW
SIO_010081: AWJ20_260
subclass of: SO_0000673
so part of: AWJ20_260
location: complement(809303..809662)
location: region:809303-809662:-1
so has part: feature:809303-809662:-1:exon

XP_018734504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:809303-809662:-1:exon

AWJ20_261
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TUS1
locus tag: AWJ20_261
so part of: sequence
location: <809308..>812684
location: region:809308-812684:1
so has part: feature:809308-812684:1:exon
subclass of: SO_0000010

30034540
type: Gene
SIO_000068: ncbigene

position:809308:1
position: 809308
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:812684:1
position: 812684
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809308-812684:1:exon

AWJ20_261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TUS1
locus tag: AWJ20_261
product: Rho family guanine nucleotide exchange factor TUS1
transcript id: XM_018879563.1
SIO_010081: AWJ20_261
subclass of: SO_0000673
so part of: AWJ20_261
location: join(<809308..812348,812447..>812684)
location: region:809308-812684:1
so has part: feature:809308-812348:1:exon
so has part: feature:812447-812684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809308-812348:1:exon

position:812348:1
position: 812348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:812447-812684:1:exon

position:812447:1
position: 812447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AWJ20_261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TUS1
locus tag: AWJ20_261
codon start: 1
product: Rho family guanine nucleotide exchange factor TUS1
translation: MYGQQHSQQHPQQEHPQQGYQQGYQQGYQQRYPQEYQQQYQQEYQEGYQQEYQQEYQYQQPNVSDRYQQPLPLPGQRHPELQSQSPGYGGQRYGYRGEKEAAVNGNGIGNGPPLPPKPYQANDDGLVRLNQAMSGVRLVGPRQPTTGQGFGNYNDYTSNNSNTDSGSSNIGRGKSYSDEYGGSGSANGFSAVTEFADRRPTFHPSGPRSPPRTGSPTRNSYQTTPGNLYSTQTDGSTAATYGYSQPLAPQVPSQVPPLVPPVPVLQAPTTEFRHSNPTNTFDLSTPSRYDIVGGTGSIRPRLHLDPQPSTPPSQHYSHPQQTPPSQGYVHPQQPSHQSYSPLPFVPDQYNNQRSNWDEQPVQVPRLSPINAEAPRFGNDNLTRQAPVSDYSDEEEYEEDSSSFVSGIREELNSLYPSSPYGQTAGRDTSITPQQYTYQSTSPTIDRYSYGQDYQAQVQPDPRSEYQPHYEPDYQNQQQYTNHRQNQSDLVPKRLSLPSQSNVLYQESDRQNRRLSNIVAGVSNTQFDNNVSTAVNAGSDMFRSTSDVSQGPSYGTVPQSSQSNPSPQLRQWTQQQTANRVPVGSSDRIPSYGNQAIPEFNRSLTTSDVPPVSTLAPSSASVYSAQTDMSSSLLSSTRSTDNDLMIKMGLPVIPDTVPVFDASRLSSRDYERCKEIWSLSSVSQWIASLFRNDLQVTVKEVNRALVGLFTHYIPTLNWLHAEVMADDFIRTLRASGFITIKEEENTKTNQENRTVPASVPKPTITGLKTGSSPCVQINSSVSVSGVFPILTGGGCYSKYSHEIKRDQVQPYRCYSPKCSRTIPVRAALPTIDIANVDSAANKDWATCYSIDKAQQLEIGKREVSRQSAIHELIAGEESYVSDLNILLSVYGESLSRIVPTIIDDQAEFCAAAFGLVKGVMNCNSQYLLRGLRERQAQESPFITGVADIVLEWVKHAKEPYISYVNSYPQVDRRIRKEKETNIPFSDWLDRTSRDVRTKGVPHSFYFQRVIPRFLRPRLQPATGRNPEIHGPAGSGRAAQVGEQKHEARTATKRRQTANHPTRRGSPQRGPQRRLGSQPPDSARQLPPHRQTPA
SIO_010081: AWJ20_261
subclass of: SO_0000673
so part of: AWJ20_261
location: join(809308..812348,812447..812684)
location: region:809308-812684:1
so has part: feature:809308-812348:1:exon
so has part: feature:812447-812684:1:exon

XP_018734505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:809308-812348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:812447-812684:1:exon

AWJ20_262
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ROM2
locus tag: AWJ20_262
so part of: sequence
location: <812875..>814602
location: region:812875-814602:1
so has part: feature:812875-814602:1:exon
subclass of: SO_0000010

30034551
type: Gene
SIO_000068: ncbigene

position:812875:1
position: 812875
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:814602:1
position: 814602
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812875-814602:1:exon

AWJ20_262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ROM2
locus tag: AWJ20_262
product: Rho family guanine nucleotide exchange factor ROM2
transcript id: XM_018879574.1
SIO_010081: AWJ20_262
subclass of: SO_0000673
so part of: AWJ20_262
location: <812875..>814602
location: region:812875-814602:1
so has part: feature:812875-814602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812875-814602:1:exon

AWJ20_262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ROM2
locus tag: AWJ20_262
codon start: 1
product: Rho family guanine nucleotide exchange factor ROM2
translation: MDLLVLESADDEPVVKSSSAKLLGSNVTPATDHRKIAVSRRFIGGSGQTSPTKPGMSPTSLTSAGSASVTMLNDVDKDRDILFPFRITHAGLGANLTLYTFSTPEKARRDRELWRDAIMNAKREYSSAATTLKSEPFRLRVLADQAFGYDSSSAPQIPVHTAGTALDRAVREAESRTPVSLTRSNDSTSATSVSTLVDGGAGDGPRQVVNSLINSPVNCGVSFVYADRNEYCMLGLDYGVYLHDKRVGSVWKRCLTLTHVTQIAVIQDMNVAIILAGKTLAYYHLDVLINQATKPDTQKSTVVPKGYKLSEKNVGFFATGIMRDRILLFYKKTDGLSSVFKVLEPVREKGSQQKRSKVLFSRDETLSSTEYFRDVDKFYIPTESYGISLFKSTFAVHTTKGFELLSFDTKSTPLSLPLIAPQALQNVLRISRGFKFSSVDSFKKKIESSKPLGMFRVTSESIILCYAEFALYTDNDGNLNDRNAVFSYLSKAKKVSFQMPHLIIFGDEIIEVRRVDRSGQLRQVITGKHIRCIDSRDGQIKAAMVHPLIRTKQLVVELVENEFAVMDDTSTLSGY
SIO_010081: AWJ20_262
subclass of: SO_0000673
so part of: AWJ20_262
location: 812875..814602
location: region:812875-814602:1
so has part: feature:812875-814602:1:exon

XP_018734506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:812875-814602:1:exon

AWJ20_263
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_263
so part of: sequence
location: complement(<816386..>816766)
location: region:816386-816766:-1
so has part: feature:816386-816766:-1:exon
subclass of: SO_0000010

30034562
type: Gene
SIO_000068: ncbigene

position:816386:-1
position: 816386
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:816766:-1
position: 816766
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816386-816766:-1:exon

AWJ20_263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_263
product: hypothetical protein
transcript id: XM_018879585.1
SIO_010081: AWJ20_263
subclass of: SO_0000673
so part of: AWJ20_263
location: complement(<816386..>816766)
location: region:816386-816766:-1
so has part: feature:816386-816766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:816386-816766:-1:exon

AWJ20_263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_263
codon start: 1
product: hypothetical protein
translation: MTGLVFYLERTKGFYAAYNEMAAGVAVYFVLALAYQFWISKVEKNAKYLGQHPSTGSRIAIITSSPKATSEYNVTVYISDKSDKVVETQELKGNFTDWFNVNGFIVYDKFATAIASVVPTVPKKDL
SIO_010081: AWJ20_263
subclass of: SO_0000673
so part of: AWJ20_263
location: complement(816386..816766)
location: region:816386-816766:-1
so has part: feature:816386-816766:-1:exon

XP_018734507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:816386-816766:-1:exon

AWJ20_264
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MAG2
locus tag: AWJ20_264
so part of: sequence
location: <818272..>820653
location: region:818272-820653:1
so has part: feature:818272-820653:1:exon
subclass of: SO_0000010

30034573
type: Gene
SIO_000068: ncbigene

position:818272:1
position: 818272
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:820653:1
position: 820653
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818272-820653:1:exon

AWJ20_264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MAG2
locus tag: AWJ20_264
product: Mag2p
transcript id: XM_018879595.1
SIO_010081: AWJ20_264
subclass of: SO_0000673
so part of: AWJ20_264
location: <818272..>820653
location: region:818272-820653:1
so has part: feature:818272-820653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818272-820653:1:exon

AWJ20_264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MAG2
locus tag: AWJ20_264
note: Cytoplasmic hypothetical protein; induced in response to mycotoxin patulin; ubiquitinated protein similar to the human ring finger motif protein RNF10; predicted to be involved in repair of alkylated DNA due to interaction with MAG1; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Mag2p
translation: MSQGYNFNANSFVPGSTQVVKSPGTGPGSSPDSSNLKVATLNASRTKSSDGADTPTGKRNGSRRNSNNGNDTGHGLKTGNMNANQHRTSRNNGRGNNNNNNNSNDKGGANRKSKPNGGGGGSRKESRRGGNDLSLSDILQSENRNKRGEISISHLVDLSPGPEHRQSQSGRRRVPGAGSTYSSSYYSDSYYSHSNSYLDKVSYINMTCRFVLDPRLEYKFLLNDPDSHVPMERVLRVICQPATCPICLEAIPEAPRMLECGHLICYPCLFRYLDADKFEVNPSPPRPSAGAASTTGSSGRKNKECPLCFDRIRIEKVKPVTLADVGDDRFDAPKVDGEAILRLMFRPNDSLLSIPRDTVGAKKSDFYDLPLVSEKDISQCSRLVRGSVEYAISEFQREIAELKKSREENRLMYQDDGYWHTEAIKMIQEMIRIYSSESGLEINDKDGITGSAGTTAPTSSANSPISGPSQPSTAASAIHSGQSTPQIHQIGEWQIEGDVPMGSFDSDVKEEVEESISEPIIEESVKNQLSSLSLNEEPVKDIQLANAQSEKFYGRYNDESAFFFYQTGSLESSTKYFLAPLDIRILKKAFGSYSEFPAIIVVKVENILNGTSVNDQLKKRMKYLGHLPTQTPVAFLECDWRDVVPGEVLRSFSKELQLRKKRKQDKEKREDRDQKRIQKEQEEQFRRDLLQESNSPFSYPVGSLGSPPMNAYDDSADPVLAPVPTLPVSPILGSSDSNDGSSSPWGSKTSFAQAASISKAEQDGRIIDELLSEAEQRKGRGGRKKLVLMSNRH
SIO_010081: AWJ20_264
subclass of: SO_0000673
so part of: AWJ20_264
location: 818272..820653
location: region:818272-820653:1
so has part: feature:818272-820653:1:exon

XP_018734508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:818272-820653:1:exon

AWJ20_265
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CRN1
locus tag: AWJ20_265
so part of: sequence
location: complement(<820839..>822593)
location: region:820839-822593:-1
so has part: feature:820839-822593:-1:exon
subclass of: SO_0000010

30034584
type: Gene
SIO_000068: ncbigene

position:820839:-1
position: 820839
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:822593:-1
position: 822593
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820839-822593:-1:exon

AWJ20_265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CRN1
locus tag: AWJ20_265
product: Crn1p
transcript id: XM_018879606.1
SIO_010081: AWJ20_265
subclass of: SO_0000673
so part of: AWJ20_265
location: complement(<820839..>822593)
location: region:820839-822593:-1
so has part: feature:820839-822593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:820839-822593:-1:exon

AWJ20_265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CRN1
locus tag: AWJ20_265
inference: similar to AA sequence:KEGG_Orthology:K13886
note: Coronin; cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regulate its activity; plays a role in regulation of actin patch assembly; GO_component: GO:0005885 - Arp2/3 protein complex [Evidence IDA,IPI] [PMID 12499356]; GO_component: GO:0030479 - actin cortical patch [Evidence IDA] [PMID 9822583]; GO_component: GO:0005826 - actomyosin contractile ring [Evidence IBA]; GO_function: GO:0003779 - actin binding [Evidence IEA]; GO_function: GO:0051015 - actin filament binding [Evidence IEA]; GO_function: GO:0051015 - actin filament binding [Evidence IDA] [PMID 9885246]; GO_function: GO:0008017 - microtubule binding [Evidence IDA] [PMID 9885246]; GO_function: GO:0030674 - protein binding, bridging [Evidence IDA] [PMID 9885246]; GO_process: GO:0051666 - actin cortical patch localization [Evidence IMP] [PMID 18177206]; GO_process: GO:0007015 - actin filament organization [Evidence IMP,IPI] [PMID 9885246]; GO_process: GO:0007017 - microtubule-based process [Evidence IPI] [PMID 9885246]; GO_process: GO:0034316 - negative regulation of Arp2/3 complex-mediated actin nucleation [Evidence IDA,IMP] [PMID 12499356]; GO_process: GO:2000601 - positive regulation of Arp2/3 complex-mediated actin nucleation [Evidence IDA,IMP] [PMID 21454476]
codon start: 1
product: Crn1p
translation: MSEVGKLPDKIPLFRGHTAAVLDTDWNPFDETMVASASDDGKIGIWKVPEGFTLRPVGEDVDDIKDVEPVKFLTGHSKKVGHIQFHPVAENILASSSGDYTVRIWDIEQGKALYTLPHKDLITSFAFNHDGSLLATASRDKKLRVWDIRQEKIISEGAGHAGAKASRVVWLGDSDRLATTGFSRMSDRQLGVWNATDLASGPIGSFIVLDSSAGICMPFYDEGTKCLYLAGKGDGNIRYFEFVNDEFIALSEYQSIEPQRGMGVLPRRALDVKQHEVVRFYKMVNDSLIEPVQFFVPRRADTFQDDIYPEARAGEHALTAEEWASGKNSAPKVISLADVFDGKTGSSFIPEKKPEQPAPKSEPKSEPKSEAKEAPKEEPKEEPKPAAVKEEPKTETKEVSTPATPSTPRSIKQDDTDIFASKDVQKFLAKDAEKEDEGEKEDEDSAWKDEDDIVIVKDDKIPSSSTKSNAVAEETKPEPATPTSSTPVDDEPKPTETKEPETKEPETKKPEPTEATTNGNVHTPLLPKSLHETLSQHGVDKTVEVLVDHVTKLTTTVQSLLADVEKKHSHIQSLEAKLEQALKK
SIO_010081: AWJ20_265
subclass of: SO_0000673
so part of: AWJ20_265
location: complement(820839..822593)
location: region:820839-822593:-1
so has part: feature:820839-822593:-1:exon

XP_018734509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:820839-822593:-1:exon

AWJ20_266
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ALD4
locus tag: AWJ20_266
so part of: sequence
location: <824006..>825157
location: region:824006-825157:1
so has part: feature:824006-825157:1:exon
subclass of: SO_0000010

30034595
type: Gene
SIO_000068: ncbigene

position:824006:1
position: 824006
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:825157:1
position: 825157
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824006-825157:1:exon

AWJ20_266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ALD4
locus tag: AWJ20_266
product: aldehyde dehydrogenase (NADP(+)) ALD4
transcript id: XM_018879617.1
SIO_010081: AWJ20_266
subclass of: SO_0000673
so part of: AWJ20_266
location: <824006..>825157
location: region:824006-825157:1
so has part: feature:824006-825157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824006-825157:1:exon

AWJ20_266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ALD4
locus tag: AWJ20_266
inference: similar to AA sequence:KEGG_Orthology:K00128
note: Mitochondrial aldehyde dehydrogenase; required for growth on ethanol and conversion of acetaldehyde to acetate; phosphorylated; activity is K+ dependent; utilizes NADP+ or NAD+ equally as coenzymes; expression is glucose repressed; can substitute for cytosolic NADP-dependent aldehyde dehydrogenase when directed to the cytosol; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0042645 - mitochondrial nucleoid [Evidence IDA] [PMID 10869431]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 11502169]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0004029 - aldehyde dehydrogenase (NAD) activity [Evidence IDA] [PMID 9473035]; GO_function: GO:0004029 - aldehyde dehydrogenase (NAD) activity [Evidence IMP] [PMID 9675847]; GO_function: GO:0004030 - aldehyde dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO_function: GO:0004030 - aldehyde dehydrogenase [NAD(P)+] activity [Evidence IDA] [PMID 9473035]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_process: GO:0006740 - NADPH regeneration [Evidence IGI] [PMID 19158096]; GO_process: GO:0019413 - acetate biosynthetic process [Evidence IGI] [PMID 10919763]; GO_process: GO:0006067 - ethanol metabolic process [Evidence IMP] [PMID 9675847]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0006090 - pyruvate metabolic process [Evidence IMP] [PMID 10409655]
codon start: 1
product: aldehyde dehydrogenase (NADP(+)) ALD4
translation: MSVLTTISPITSSAIITTPATSIEDIDNKILPTAVSAQKKWASTSLAERKAIVAKYIELLKDDETATRLGKDITKQMGRPVRYTKGEISTAALRAEVLLGYADEALAPVNVDESTRPSFKKYLTKDPLGVILIIFPWNYPYLCLTNGLIPALLAGNSVLIKPSPQTPNVANEVAKLFKTAGLPDGVLQVVHSGDVQVLEGLVQRKAVAGVVFTGSVEGGLAVQKAAAGRTIPIALELGGNDPAYVRSDVKDIKATAEDIVDGAIFNSGQSCCSIERVYVDEKVYDQFVDAAVEIVKGYKLGDPFDESTQIGPVISEKAARGIRAQIKDAVDRGAKKLIPSETFAQAEKLNPTFVAPQILVNLDETSRKYLKYSWLGRYSGPSI
SIO_010081: AWJ20_266
subclass of: SO_0000673
so part of: AWJ20_266
location: 824006..825157
location: region:824006-825157:1
so has part: feature:824006-825157:1:exon

XP_018734510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824006-825157:1:exon

AWJ20_267
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_267
so part of: sequence
location: <825275..>825508
location: region:825275-825508:1
so has part: feature:825275-825508:1:exon
subclass of: SO_0000010

30034606
type: Gene
SIO_000068: ncbigene

position:825275:1
position: 825275
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:825508:1
position: 825508
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825275-825508:1:exon

AWJ20_267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_267
product: hypothetical protein
transcript id: XM_018879628.1
SIO_010081: AWJ20_267
subclass of: SO_0000673
so part of: AWJ20_267
location: <825275..>825508
location: region:825275-825508:1
so has part: feature:825275-825508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825275-825508:1:exon

AWJ20_267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_267
codon start: 1
product: hypothetical protein
translation: MNDSDLGLTASVWTSDLEVGEELGNQLEAGTVFVNRSDYPDPHLAWTGFKNSGRGVSLGPFGFTFFTKLKSHHIKAL
SIO_010081: AWJ20_267
subclass of: SO_0000673
so part of: AWJ20_267
location: 825275..825508
location: region:825275-825508:1
so has part: feature:825275-825508:1:exon

XP_018734511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:825275-825508:1:exon

AWJ20_268
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GLN4
locus tag: AWJ20_268
so part of: sequence
location: <833710..>836196
location: region:833710-836196:1
so has part: feature:833710-836196:1:exon
subclass of: SO_0000010

30034617
type: Gene
SIO_000068: ncbigene

position:833710:1
position: 833710
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:836196:1
position: 836196
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833710-836196:1:exon

AWJ20_268
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GLN4
locus tag: AWJ20_268
product: glutamine--tRNA ligase
transcript id: XM_018879639.1
SIO_010081: AWJ20_268
subclass of: SO_0000673
so part of: AWJ20_268
location: <833710..>836196
location: region:833710-836196:1
so has part: feature:833710-836196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833710-836196:1:exon

AWJ20_268
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GLN4
locus tag: AWJ20_268
inference: similar to AA sequence:KEGG_Orthology:K01886
note: Glutamine tRNA synthetase; monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Glu); N-terminal domain proposed to be involved in enzyme-tRNA interactions; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 15706032]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 15706032]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0004819 - glutamine-tRNA ligase activity [Evidence IDA] [PMID 2991203]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0016876 - ligase activity, forming aminoacyl-tRNA and related compounds [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 23222640]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA,IEA]; GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]; GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IMP,ISS] [PMID 2991203]; GO_process: GO:0043039 - tRNA aminoacylation [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA,IEA]
codon start: 1
product: glutamine--tRNA ligase
translation: MSEVDELAVKFEKTLGFKETKVKEILKNTKVSGSLDEILAEAGVDEAHPVEDASVATLLHSLAQLSKDADEQLKKGRKSLSDLIANSGGQIKTNVQLNGGWDYIVRVVKDGKSVDREELEKESGVGIVVTDDQIKESVAKYIKEHEAELVEKRYKLAPTVIVGVKQLPELKWANPAAFKPIIDEQILALLGPKDERDVVKKEKKKKADTKPGAAGTGSDAKSDSGAGAGAGAGSARSMFTEGFLGSLHKPGENAQIYPERMKEHLKFTGGHVMTRFPPEPNGYLHIGHSKAIAINFGFAQYYNGKCYLRFDDTNPEAEEEQYFTSIKEIVEWLGFKPWAITYSSDYFDQLYELAEQLILKDLAYVCFCTAEEMKAHRGISEDGTRGGKRTPCKHRSQSTEENLKLFREMRDGKYAKGEATLRMKQDLENPNPQMWDLVAYRVLNATHHRTGDKWKIYPTYDFTHCLVDSIENISHSLCTLEFYLSRESYDWLCNALCVYRPQQRESGRLNVTGTIMSKRKILKLVNDKIVRGWDDPRLFTLVAIRRRGVPPGAVLSFIAELGVTTTNSTIQASRFENSVRKYLEDSTPRLMMIPDPVPVILDNLPEDHLEFVSVPFKPGNPDFGEHTVPFTRTVYVDRSDFREEASKDYFRLAPGQSVGLLKVPHNIRVTSFKKDDNGLVTEIHAHYENDIPFKKPKTFIQWVAHAPAHNSPVRIAETRLFNQLFKSENPDSNPDGYLADINPDSEIILRNSIIETGFFEVKERSPWTITKPGEEKDILAGHDKKGAPEAVRFQALRVGYFCLDKDSTPDSIVLNRIVTLKEDTAKNN
SIO_010081: AWJ20_268
subclass of: SO_0000673
so part of: AWJ20_268
location: 833710..836196
location: region:833710-836196:1
so has part: feature:833710-836196:1:exon

XP_018734512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833710-836196:1:exon

AWJ20_269
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MET30
locus tag: AWJ20_269
so part of: sequence
location: <839956..>842436
location: region:839956-842436:1
so has part: feature:839956-842436:1:exon
subclass of: SO_0000010

30034628
type: Gene
SIO_000068: ncbigene

position:839956:1
position: 839956
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:842436:1
position: 842436
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839956-842436:1:exon

AWJ20_269
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MET30
locus tag: AWJ20_269
product: Met30p
transcript id: XM_018879650.1
SIO_010081: AWJ20_269
subclass of: SO_0000673
so part of: AWJ20_269
location: <839956..>842436
location: region:839956-842436:1
so has part: feature:839956-842436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:839956-842436:1:exon

AWJ20_269
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MET30
locus tag: AWJ20_269
inference: similar to AA sequence:KEGG_Orthology:K10259
note: F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p; GO_component: GO:0019005 - SCF ubiquitin ligase complex [Evidence IDA] [PMID 9716410]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0043224 - nuclear SCF ubiquitin ligase complex [Evidence IDA] [PMID 10637232]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 10637232]; GO_function: GO:0043130 - ubiquitin binding [Evidence IDA] [PMID 21070969]; GO_process: GO:0006270 - DNA replication initiation [Evidence IMP] [PMID 15870262]; GO_process: GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP] [PMID 15870262]; GO_process: GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [Evidence IGI] [PMID 9716410]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0019344 - cysteine biosynthetic process [Evidence IEA]; GO_process: GO:0009086 - methionine biosynthetic process [Evidence IEA]; GO_process: GO:0000209 - protein polyubiquitination [Evidence IMP] [PMID 9716410]; GO_process: GO:0016567 - protein ubiquitination [Evidence IEA]; GO_process: GO:0016567 - protein ubiquitination [Evidence IGI,IPI] [PMID 9499404]; GO_process: GO:0030174 - regulation of DNA-dependent DNA replication initiation [Evidence IMP] [PMID 15870262]; GO_process: GO:0000083 - regulation of transcription involved in G1/S transition of mitotic cell cycle [Evidence IMP] [PMID 15870262]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0046685 - response to arsenic-containing substance [Evidence IDA] […
codon start: 1
product: Met30p
translation: MSIGSVPTPAAGTSPLDVVSSNTSLNMTGATTLSSPSTSTSKASCSTAGPASIQQQLYTKPQTLSSVSAFDSAPTPSSPPATPESENSRPPTTDVTNTTSNISTPNNNAKQNSISSSGSSSSPDAGLLAPVSSVSSRESTPSTTSNSNIKSLLPTAVARSSSEHKNYCYRHHPDVTCNRQADEKKMQELQEEMDRIQDPTEKEAINQIWATFSAAPSRQRMLILQGILAQCCFPQLSTVSQLVKDLIRIDFLSALPTELSFQILSYLDSASLCRAAAVSKHWKTLADDDVVWHRMCEQHIDKKCTKCGWGLPLLEKKRLQDAKRAIQARAAGRSKDSSTSGTGSLTPVLTTSNKRPLESDDSRTPSASPAPNSSSNGLSVVPSKKRKTRPWKDVYSERYKIERNWRDNRYQLKEYKDTSAVLSLQFDDQYLMTGTYDGDIKVWDVESGDLIRTLSGHLQAVSGLKFDQTKLISGSWDRTVRVWNYRTGECVSTFRGHEQQVLCIDFHDKWIASGSADCNVKVWNFEEKSCFTLRGHKEWVHSVKIHSASSTLYSSSEDITVRMWDLTTKQCLKVFGGPDNTPIGHVAQIQQVIPLTLDHLEGQPERRRSVVTSSNSNNSNDTVGSSTNPAGTAPINVNTNVSSTSAIDNQVHGNNTDENAGDDRADATGATTVAGTNRSSSFSTNNTVTTAIPGRLLTTSLTNSNTGFSANDSQTNIKNRPTHLLTSSLDNTIKLWDIETGECVRTLFGHAEGVWCIAADTFRIVSGAHDKLVKIWDLQSGKCWHTFSGHSRPVCCVGLSDTRFASGGDDGVVRIYCFDDIEANQP
SIO_010081: AWJ20_269
subclass of: SO_0000673
so part of: AWJ20_269
location: 839956..842436
location: region:839956-842436:1
so has part: feature:839956-842436:1:exon

XP_018734513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:839956-842436:1:exon

AWJ20_270
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GAC1
locus tag: AWJ20_270
so part of: sequence
location: <853989..>856904
location: region:853989-856904:1
so has part: feature:853989-856904:1:exon
subclass of: SO_0000010

30034640
type: Gene
SIO_000068: ncbigene

position:853989:1
position: 853989
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:856904:1
position: 856904
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853989-856904:1:exon

AWJ20_270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GAC1
locus tag: AWJ20_270
product: protein phosphatase regulator GAC1
transcript id: XM_018879662.1
SIO_010081: AWJ20_270
subclass of: SO_0000673
so part of: AWJ20_270
location: <853989..>856904
location: region:853989-856904:1
so has part: feature:853989-856904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853989-856904:1:exon

AWJ20_270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GAC1
locus tag: AWJ20_270
codon start: 1
product: protein phosphatase regulator GAC1
translation: MIMLSRPSPVDSPASGSPSTSPSPASSSQQSGSASSTASANPRSEISKLRSQSQSPLQKSQSGSALSSLIEQHNNHHHHHIPVYTPGQHSELSTAFLHKQKRGGNVRKHGDVIAIDRPLASSTHSTSPPTSPNSITTSASISSPTGSITSPLGSPAAATSTSAPSVTTTGVTTGATTSGPVGSVAAPASPISPTSQLASINSKPFMQLVPDYVTSSSPGFSPVNDSNDSDNITIKASPSTSEDDDDDSPEANQRRQQKMIRKKSGELVKSSLKLPSLLRTQSMPIKMVHFDSKLEHVRKFFRRERPTAVSSGSTTPVKEKVSFQWASGSSTSDSETDSDYSSDSEEEDDGLDGDASEDDDIETIRGAVASHRRSIAGSISGAPKKHLRHHQKKIWQIALPNFNSENSNQSDKMVYLDSVFLSSDNNNLIGHICVKNVSYRKNVSVRYTVDFWKSVTDVVADYNGDVRRKTLRSGYDRFTFSIRLADLPQAALTSNSMFFCVRYQSDDGDFWDNNNSLNYEVLLTRVPKHAADHTSSGTVKPAKTHTKQQPTMLDDDMDEIDKTTFKSAPRQASSYFMYQPNQPAATNAAPHHGRNGGLKHHHRRNKTDPSPDFLYDNDFDHHHSVEDTADLFDGLTVGPKQDATRATGNVSKTGSYNSSGTGSFGNSGNSFGSSNNKPSISNSFGGASNFSPTKKSNGLTSRYSFGASLNAALARNNMTGRRSSYDVDGEADEEVTTSESTSDDESTDTTPVDSSNLSTPQLRSFIFPKTNPRNSMLIRPHSSTDVTDESSRPAWDSLSYKDIINKYCFFQDTPVSNSSSITPTGTSAASNKNTAAATGQTGKKSSTMVHNHHHHSHSMLPHHHQSHPRPAGSYIPSPMTTSPALIPQSFTPPIVPQSTSVYSAQNASSSPLLAAAAATLALNSPPESSSSTPSGSFSPSPTDTPGSPGESSSDTLLDVSEPRKIWHSVEV
SIO_010081: AWJ20_270
subclass of: SO_0000673
so part of: AWJ20_270
location: 853989..856904
location: region:853989-856904:1
so has part: feature:853989-856904:1:exon

XP_018734514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:853989-856904:1:exon

AWJ20_271
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DBP9
locus tag: AWJ20_271
so part of: sequence
location: <859190..>860950
location: region:859190-860950:1
so has part: feature:859190-860950:1:exon
subclass of: SO_0000010

30034651
type: Gene
SIO_000068: ncbigene

position:859190:1
position: 859190
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:860950:1
position: 860950
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859190-860950:1:exon

AWJ20_271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DBP9
locus tag: AWJ20_271
product: Dbp9p
transcript id: XM_018879673.1
SIO_010081: AWJ20_271
subclass of: SO_0000673
so part of: AWJ20_271
location: <859190..>860950
location: region:859190-860950:1
so has part: feature:859190-860950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:859190-860950:1:exon

AWJ20_271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DBP9
locus tag: AWJ20_271
inference: similar to AA sequence:KEGG_Orthology:K14810
note: DEAD-box protein required for 27S rRNA processing; exhibits DNA, RNA and DNA/RNA helicase activities; ATPase activity shows preference for DNA over RNA; DNA helicase activity abolished by mutation in RNA-binding domain; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 11565753]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004003 - ATP-dependent DNA helicase activity [Evidence IDA] [PMID 15028736]; GO_function: GO:0033680 - ATP-dependent DNA/RNA helicase activity [Evidence IDA] [PMID 15028736]; GO_function: GO:0004004 - ATP-dependent RNA helicase activity [Evidence IDA] [PMID 15028736]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA,IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 23222640]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0006200 - ATP catabolic process [Evidence IEA]; GO_process: GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 11565753]; GO_process: GO:0006364 - rRNA processing [Evidence IEA]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]
codon start: 1
product: Dbp9p
translation: MSSSNGEMAGKNGFESFNLDPRLQQALVQAGFSEPTLIQENAIPLALSEKKDIVARARTGSGKTAAYLIPIIESLLQAAGSGNAGTGVISTLILVPSKELADQVVKMTTMLTTYCTKLIQVVNISQATSEQVQTSLLSENPAIVVATPARALAHIKRKSLDTKSLAYFVIDEADLILSYGHEDDLNELAELLPKSMQTWLMSATLSDEIDAIKGKFCRNVAVLKLQDTVSSEQLLQYYVKCNELDKFLLAYVIFKLKLVKGKTIVFVNDIDRCYRLKLFFEQFGIKSCVLNSELPVSSRLHIVDEFNKNVYNLLIATDESNEKIEDDEDDKDDATANSNGNDQEKQTDSQPTENTQETQETQKKNNNNNKSKDYGVSRGVDFQNVACVLNFDLPTSTKSYTHRIGRTARASKTGMALSFVVSKESWGKHKPSMLASAKRDEKVLNRIIKTQGKQDNELKPYSFDMKQVESFRYRMEDAFRAVTKVAIREARVKEIRQELLASDKLKRHFEENPEDLANLRHDKELHPARVQGHLKRVPDYLLPKTGQKPAAFTGHVPFNKTNNKHRVHKSKKSSKKRDPLKSFKRR
SIO_010081: AWJ20_271
subclass of: SO_0000673
so part of: AWJ20_271
location: 859190..860950
location: region:859190-860950:1
so has part: feature:859190-860950:1:exon

XP_018734515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:859190-860950:1:exon

AWJ20_272
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_272
so part of: sequence
location: complement(<861644..>862252)
location: region:861644-862252:-1
so has part: feature:861644-862252:-1:exon
subclass of: SO_0000010

30034662
type: Gene
SIO_000068: ncbigene

position:861644:-1
position: 861644
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:862252:-1
position: 862252
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861644-862252:-1:exon

AWJ20_272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_272
product: hypothetical protein
transcript id: XM_018879684.1
SIO_010081: AWJ20_272
subclass of: SO_0000673
so part of: AWJ20_272
location: complement(<861644..>862252)
location: region:861644-862252:-1
so has part: feature:861644-862252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861644-862252:-1:exon

AWJ20_272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_272
codon start: 1
product: hypothetical protein
translation: MGIIFASPEYKKIINGKSAPSLCNVVNVGLSALRGANPLENGRPASNAFDRINRESAVTLAKAFASQQQTETTNPAPFVYISAHDWNPLAPRGYIQSKRAAETEISVIPHLRSVFLQPGFMYDSSSSSTVRDSLSKLLRTGEFISNATGLSSLNLLPNNPSISVQVVARATIEALDDQSVSGVVSLEALQKFAHFQSDPKPV
SIO_010081: AWJ20_272
subclass of: SO_0000673
so part of: AWJ20_272
location: complement(861644..862252)
location: region:861644-862252:-1
so has part: feature:861644-862252:-1:exon

XP_018734516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:861644-862252:-1:exon

AWJ20_273
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GCY1
locus tag: AWJ20_273
so part of: sequence
location: complement(<863178..>864119)
location: region:863178-864119:-1
so has part: feature:863178-864119:-1:exon
subclass of: SO_0000010

30034673
type: Gene
SIO_000068: ncbigene

position:863178:-1
position: 863178
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:864119:-1
position: 864119
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863178-864119:-1:exon

AWJ20_273
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GCY1
locus tag: AWJ20_273
product: glycerol 2-dehydrogenase (NADP(+)) GCY1
transcript id: XM_018879695.1
SIO_010081: AWJ20_273
subclass of: SO_0000673
so part of: AWJ20_273
location: complement(<863178..>864119)
location: region:863178-864119:-1
so has part: feature:863178-864119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863178-864119:-1:exon

AWJ20_273
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GCY1
locus tag: AWJ20_273
inference: similar to AA sequence:KEGG_Orthology:K18097
note: Glycerol dehydrogenase; involved in an alternative pathway for glycerol catabolism used under microaerobic conditions; also has mRNA binding activity; member of the aldo-keto reductase (AKR) family; protein abundance increases in response to DNA replication stress; GCY1 has a paralog, YPR1, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0004032 - alditol:NADP+ 1-oxidoreductase activity [Evidence IDA,ISS] [PMID 11306085]; GO_function: GO:0004033 - aldo-keto reductase (NADP) activity [Evidence IDA] [PMID 10818358]; GO_function: GO:0004033 - aldo-keto reductase (NADP) activity [Evidence IDA] [PMID 17140678]; GO_function: GO:0047953 - glycerol 2-dehydrogenase (NADP+) activity [Evidence IEA]; GO_function: GO:1990042 - glycerol dehydrogenase [NAD(P)+] activity [Evidence IMP] [PMID 22979944]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 20844764]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IDA] [PMID 17962934]; GO_process: GO:0042843 - D-xylose catabolic process [Evidence IDA] [PMID 12271459]; GO_process: GO:0019568 - arabinose catabolic process [Evidence IDA] [PMID 12271459]; GO_process: GO:0034599 - cellular response to oxidative stress [Evidence IGI] [PMID 17919749]; GO_process: GO:0006071 - glycerol metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: glycerol 2-dehydrogenase (NADP(+)) GCY1
translation: MTSLDIKLNNGVTIPALGLGTWQSPKGAVESAVEYALTEAGLRHIDAAFAYLNEEEVGNGIKKAIASGKVKREDIFITTKVFPTFHNRVEESLNRSLKNLQLEYIDLLLVHWPVGLNPNGNHLLVPTKADGTRDVDPTFDLSATWKQFEKVYESGKVKAIGVSNCSVPVLTDLLKTVKVVPAVNQIENHPLLPQTEIRDFCKEKGIVIEAYSPFGSTGGPLFSNKTVLAIAEKHKTTPGTVLVSYHISSGRVVLPKTTTPSRIVENTKTVELTPEEIKELDNVHVTEGKKRFAAPPWGVDLKFPDWNASTPKP
SIO_010081: AWJ20_273
subclass of: SO_0000673
so part of: AWJ20_273
location: complement(863178..864119)
location: region:863178-864119:-1
so has part: feature:863178-864119:-1:exon

XP_018734517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:863178-864119:-1:exon

AWJ20_274
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RSB1
locus tag: AWJ20_274
so part of: sequence
location: complement(<868545..>869027)
location: region:868545-869027:-1
so has part: feature:868545-869027:-1:exon
subclass of: SO_0000010

30034684
type: Gene
SIO_000068: ncbigene

position:868545:-1
position: 868545
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:869027:-1
position: 869027
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868545-869027:-1:exon

AWJ20_274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RSB1
locus tag: AWJ20_274
product: phospholipid-translocating ATPase RSB1
transcript id: XM_018879705.1
SIO_010081: AWJ20_274
subclass of: SO_0000673
so part of: AWJ20_274
location: complement(<868545..>869027)
location: region:868545-869027:-1
so has part: feature:868545-869027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:868545-869027:-1:exon

AWJ20_274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RSB1
locus tag: AWJ20_274
note: Suppressor of sphingoid LCB sensitivity of an LCB-lyase mutation; putative integral membrane transporter or flippase that may transport long chain bases (LCBs) from the cytoplasmic side toward the extracytoplasmic side of the membrane; GO_component: GO:0071944 - cell periphery [Evidence IDA] [PMID 24146988]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 12034738]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IDA] [PMID 12034738]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 12034738]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 16407254]; GO_function: GO:0004012 - phospholipid-translocating ATPase activity [Evidence IDA,ISS] [PMID 12034738]; GO_process: GO:0015908 - fatty acid transport [Evidence IDA] [PMID 12034738]; GO_process: GO:0006869 - lipid transport [Evidence IEA]; GO_process: GO:0045332 - phospholipid translocation [Evidence IMP] [PMID 15342785]; GO_process: GO:0006950 - response to stress [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: phospholipid-translocating ATPase RSB1
translation: MSSTVPSSVASAVASAAIASASATGGGDQSLYGGLIPSHSANLAGVILFAIVWAYHTITGVYFRQYWFSTAFFIGAGLETAGYIGRFSSSTDIDNENDFLVQIICLTLAPAFFMGGVYYLLAKLVTIYGQQYSMLKPMHYSLVFILCDLCSIVIQAVGKF
SIO_010081: AWJ20_274
subclass of: SO_0000673
so part of: AWJ20_274
location: complement(868545..869027)
location: region:868545-869027:-1
so has part: feature:868545-869027:-1:exon

XP_018734518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:868545-869027:-1:exon

AWJ20_275
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ARO80
locus tag: AWJ20_275
so part of: sequence
location: <872862..>876281
location: region:872862-876281:1
so has part: feature:872862-876281:1:exon
subclass of: SO_0000010

30034695
type: Gene
SIO_000068: ncbigene

position:872862:1
position: 872862
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:876281:1
position: 876281
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872862-876281:1:exon

AWJ20_275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ARO80
locus tag: AWJ20_275
product: Aro80p
transcript id: XM_018879716.1
SIO_010081: AWJ20_275
subclass of: SO_0000673
so part of: AWJ20_275
location: <872862..>876281
location: region:872862-876281:1
so has part: feature:872862-876281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:872862-876281:1:exon

AWJ20_275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ARO80
locus tag: AWJ20_275
note: Zinc finger transcriptional activator of the Zn2Cys6 family; activates transcription of aromatic amino acid catabolic genes in the presence of aromatic amino acids; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 23651256]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19158363]; GO_function: GO:0000981 - sequence-specific DNA binding RNA polymerase II transcription factor activity [Evidence IEA]; GO_function: GO:0000981 - sequence-specific DNA binding RNA polymerase II transcription factor activity [Evidence ISS] [PMID 10207060]; GO_function: GO:0000981 - sequence-specific DNA binding RNA polymerase II transcription factor activity [Evidence IDA] [PMID 23651256]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO_process: GO:0009074 - aromatic amino acid family catabolic process [Evidence IMP] [PMID 10207060]; GO_process: GO:0009083 - branched-chain amino acid catabolic process [Evidence IEA]; GO_process: GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IMP] [PMID 10207060]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA,IEA]; GO_process: GO:0006366 - transcription from RNA polymerase II promoter [Evidence IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006569 - tryptophan catabolic process [Evidence IEA]; GO_process: GO:0006572 - tyrosine catabolic process [Evidence IEA]
codon start: 1
product: Aro80p
translation: MPPAAGALPQTPWLLSLRSSRVSGVPGAPLRGAQQGLGQSPSRRRQVDQVDPGIGLGSTGYLPGQPGNVPFPVETRPQYSWDPPKPDSSEARGATGSGAKPQPPEAHGPPESCPNLRNCGGYPRLLKEKFMCSRRKPKTVFFANPGSTEKIVDCKDDWKKNGAGNVLGRITGQSFNMASNLQDQAGGFTSVNSNQVVGPGGAPGAGVGPGGIVTGQPGIRDRQQTSSPLESSITGGSSRSPSPPLQSSGGANHSNQQQQTFRRTYKACLNCRIRKVKCDFGDLANPNKPPCARCRREGRECQLVQSRRGGIRNILAGRERRAAEAAALTLSSGSGSGADGGVNGGNEINEVSGSMGSSTSVGGAGLGSGVYGGVGGRIGGGVVGSANGGFGGLNDAGGIGPGQKSGSNAGTDVISKRELHNTSDALEILAHAARSFPKIGGAGGSGNSGTASPQGRFPPTALAPGLAGSGIGINITKNGNLGANNGAGNGGQSASSAPQPPKTLLKDSDLIAVEKIVTEDEVRVLVDYFFNALHPFYPFIPDDLHSPDEIADMPLLLAAVTTLASRYYVPEIEPHQTTKEVEEQCYAIHARLWEYTQKLISSSVWAEASTRSIGTVFAFLLFSEWNPRAIHQRWKDYANNPTEKERANVASAGSDSTVGLGAARRSDRMAWMLIGLGIRLAQDLGLMDTDPKVYLATHLSEIVLALRMGRRSMLGQFLNDPIPELNFSTFEQARLELLQIMSLAHETLYSSRNTTRELLKDGKFLNFLGLFSPHLDSWDQKYREILQDPANKTPSASSPAAPPVMDNRKTLDRESLLFDFHYIRLYIYSLALQTNAENTSTLAVAEIIPSARYVALATDAAKELLAVAIRVHGLGLLRRAPIRWVVRIVHATVFLVKTLMLSTSLVSLDSQKRTITLIKRISVVLLEASPDEIHLASRYGTILGFLGNQLSAKLDTNNKTTRRRGPKQRKIDTSAQNSGESSNASPTTTPAPSSNIGYNQPSQYPNNVEPVQGYKAEAETGDQIPAPEFDPVQGRSLYQLQEQQQQQQQQQQQQQQQQAPQQFQQFNQVPQSIPDFDIPDDDSINLATMLNVDFDFLMEGTEGLGFVEPLMEGIEQQQWSQLQQQQWMQQQQQMAGPQM
SIO_010081: AWJ20_275
subclass of: SO_0000673
so part of: AWJ20_275
location: 872862..876281
location: region:872862-876281:1
so has part: feature:872862-876281:1:exon

XP_018734519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:872862-876281:1:exon

AWJ20_276
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: JEN1
locus tag: AWJ20_276
so part of: sequence
location: complement(<876451..>877122)
location: region:876451-877122:-1
so has part: feature:876451-877122:-1:exon
subclass of: SO_0000010

30034706
type: Gene
SIO_000068: ncbigene

position:876451:-1
position: 876451
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:877122:-1
position: 877122
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876451-877122:-1:exon

AWJ20_276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: JEN1
locus tag: AWJ20_276
product: Jen1p
transcript id: XM_018879726.1
SIO_010081: AWJ20_276
subclass of: SO_0000673
so part of: AWJ20_276
location: complement(<876451..>877122)
location: region:876451-877122:-1
so has part: feature:876451-877122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876451-877122:-1:exon

AWJ20_276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: JEN1
locus tag: AWJ20_276
inference: similar to AA sequence:KEGG_Orthology:K08178
note: Monocarboxylate/proton symporter of the plasma membrane; transport activity is dependent on the pH gradient across the membrane; mediates high-affinity uptake of carbon sources lactate, pyuvate, and acetate, and also of the micronutrient selenite, whose structure mimics that of monocarboxylates; expression and localization are tightly regulated, with transcription repression, mRNA degradation, and protein endocytosis and degradation all occurring in the presence of glucose; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 17710650]; GO_function: GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]; GO_function: GO:0015355 - secondary active monocarboxylate transmembrane transporter activity [Evidence IMP] [PMID 17710650]; GO_function: GO:0097079 - selenite:proton symporter activity [Evidence IMP] [PMID 20861301]; GO_function: GO:0022857 - transmembrane transporter activity [Evidence IEA]; GO_process: GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]; GO_process: GO:0035879 - plasma membrane lactate transport [Evidence IMP] [PMID 10198029]; GO_process: GO:0035879 - plasma membrane lactate transport [Evidence IMP] [PMID 17710650]; GO_process: GO:0006849 - plasma membrane pyruvate transport [Evidence IMP] [PMID 17710650]; GO_process: GO:0097080 - plasma membrane selenite transport [Evidence IMP] [PMID 20861301]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Jen1p
translation: MALMNFNSHGSQDLYPTFLTAQLGFSKNASTVTNCVANIGALVGGVVAGHLSHVIGRRLMILICCVLGGAMVYPWAFSTNNASVNAAVFFMQALGVQSSWGVIPIHLSELSPPRFRAFIVGISYQLGNLASSASSTIESTIGERFPLTGPNGEHVPGKYNYGKVMAIFMGCVFGVLFIVILVGPENRGANLLTRDPDEEIAAAQQAYFQEKNDHQHIEGDAQP
SIO_010081: AWJ20_276
subclass of: SO_0000673
so part of: AWJ20_276
location: complement(876451..877122)
location: region:876451-877122:-1
so has part: feature:876451-877122:-1:exon

XP_018734520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876451-877122:-1:exon

AWJ20_277
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_277
so part of: sequence
location: <877483..>877821
location: region:877483-877821:1
so has part: feature:877483-877821:1:exon
subclass of: SO_0000010

30034717
type: Gene
SIO_000068: ncbigene

position:877483:1
position: 877483
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:877821:1
position: 877821
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877483-877821:1:exon

AWJ20_277
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_277
product: hypothetical protein
transcript id: XM_018879737.1
SIO_010081: AWJ20_277
subclass of: SO_0000673
so part of: AWJ20_277
location: <877483..>877821
location: region:877483-877821:1
so has part: feature:877483-877821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877483-877821:1:exon

AWJ20_277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_277
codon start: 1
product: hypothetical protein
translation: MPPAAGALPQTPWHLLRRRCWDRQRNDSSAARGATGSGAEPQPPEAQYLRSVTIQTAHGDAEERSTCQESAVGLGESRADFQDNEQKQIGNERPFTAPFITGKTKNEGANRS
SIO_010081: AWJ20_277
subclass of: SO_0000673
so part of: AWJ20_277
location: 877483..877821
location: region:877483-877821:1
so has part: feature:877483-877821:1:exon

XP_018734521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:877483-877821:1:exon

AWJ20_278
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: JEN1
locus tag: AWJ20_278
so part of: sequence
location: complement(<877627..>877983)
location: region:877627-877983:-1
so has part: feature:877627-877983:-1:exon
subclass of: SO_0000010

30034728
type: Gene
SIO_000068: ncbigene

position:877627:-1
position: 877627
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:877983:-1
position: 877983
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877627-877983:-1:exon

AWJ20_278
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: JEN1
locus tag: AWJ20_278
product: Jen1p
transcript id: XM_018879746.1
SIO_010081: AWJ20_278
subclass of: SO_0000673
so part of: AWJ20_278
location: complement(<877627..>877983)
location: region:877627-877983:-1
so has part: feature:877627-877983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877627-877983:-1:exon

AWJ20_278
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: JEN1
locus tag: AWJ20_278
inference: similar to AA sequence:KEGG_Orthology:K08178
note: Monocarboxylate/proton symporter of the plasma membrane; transport activity is dependent on the pH gradient across the membrane; mediates high-affinity uptake of carbon sources lactate, pyuvate, and acetate, and also of the micronutrient selenite, whose structure mimics that of monocarboxylates; expression and localization are tightly regulated, with transcription repression, mRNA degradation, and protein endocytosis and degradation all occurring in the presence of glucose; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 17710650]; GO_function: GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]; GO_function: GO:0015355 - secondary active monocarboxylate transmembrane transporter activity [Evidence IMP] [PMID 17710650]; GO_function: GO:0097079 - selenite:proton symporter activity [Evidence IMP] [PMID 20861301]; GO_function: GO:0022857 - transmembrane transporter activity [Evidence IEA]; GO_process: GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]; GO_process: GO:0035879 - plasma membrane lactate transport [Evidence IMP] [PMID 10198029]; GO_process: GO:0035879 - plasma membrane lactate transport [Evidence IMP] [PMID 17710650]; GO_process: GO:0006849 - plasma membrane pyruvate transport [Evidence IMP] [PMID 17710650]; GO_process: GO:0097080 - plasma membrane selenite transport [Evidence IMP] [PMID 20861301]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Jen1p
translation: MMTAKQWNFFAVAFLGWTWDAVDFFTVSLTATDIAKTFDKEVSEITWGITLVLMLRSVGALIFGLAGDKWGRKWPFIANLFLFIVLEIGTGFAQTYSGFLACRALFGIAMGGLYGNAA
SIO_010081: AWJ20_278
subclass of: SO_0000673
so part of: AWJ20_278
location: complement(877627..877983)
location: region:877627-877983:-1
so has part: feature:877627-877983:-1:exon

XP_018734522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:877627-877983:-1:exon

AWJ20_279
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_279
so part of: sequence
location: complement(<879158..>881605)
location: region:879158-881605:-1
so has part: feature:879158-881605:-1:exon
subclass of: SO_0000010

30034739
type: Gene
SIO_000068: ncbigene

position:879158:-1
position: 879158
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:881605:-1
position: 881605
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879158-881605:-1:exon

AWJ20_279
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_279
product: hypothetical protein
transcript id: XM_018879757.1
SIO_010081: AWJ20_279
subclass of: SO_0000673
so part of: AWJ20_279
location: complement(<879158..>881605)
location: region:879158-881605:-1
so has part: feature:879158-881605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879158-881605:-1:exon

AWJ20_279
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_279
codon start: 1
product: hypothetical protein
translation: MTKVTEQLTALGTTEEIVQPDNIKLVLHNNYANGSDVKAKELLLFFRDAVEGLLVPITHPSKTLATSGSVMNYDQIAGADNLHGVTCYLDSLMFAMFARLENFEPILYKTFESDEKRENLAIFLRLYVNLLRSGKLITTDVTKCLLDTIFNAGWTPSSKRYEQQDAAELFNFITEKLSMPLLTLRVDIAHAGKEVAEDDHKLVNERLLLVPIPGERTDPPVTLEECLERYFANSVEVSRQLERFGSDFSDLARRSPSANHSGVRKGASSPNLAKPVRKFSLETVEIPRFLKEIERKATENQSDAGSGTGRSSPAIASTEEGNDENDYPDHMVKKLRTRASTSHSLPPSYDSLYKDRPPPTLPPQKVVDLWNQKNEITLPAWMFLQLLPFYSDMRSQQQKKHDKKVLRNQFLNGNGTANEDKKDDDDENDEVDAPVEEHFANARPVLGICLKRYSWTPEGQSIRNDRQVIVPQTIHLPSFVADDSEEGSLFGNFKLVLESAIFHRGTSINSGHFVAIAAEDAAIDYSAEEVLPSNNNSTGSFFNSRRRHHRRHHTHNDRDVLPVPKSPLSQPVSGRNSESGPRPKRWVFFDDLQPVGKKTQIVDFDEVFARECPYLLFYRMVSANDDEALSTKSRGDIQPLPYVSSLDLSHSSSIESDTLDSVTDTFVNVPPFESQTTIQTMSTVADQLSTTGDRGRGGNADTSSIDMNEFKNETKGERRSKLFRLTRGKSAQDINSRSRSAPPDKRNLSTPRMFEQGLDPSLPSLDVVPNPVYPGATHRQQPLASGVDASRMSSRSLRRRANETQYNVDEKCVLM
SIO_010081: AWJ20_279
subclass of: SO_0000673
so part of: AWJ20_279
location: complement(879158..881605)
location: region:879158-881605:-1
so has part: feature:879158-881605:-1:exon

XP_018734523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:879158-881605:-1:exon

AWJ20_280
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_280
so part of: sequence
location: complement(<883138..>883896)
location: region:883138-883896:-1
so has part: feature:883138-883896:-1:exon
subclass of: SO_0000010

30034751
type: Gene
SIO_000068: ncbigene

position:883138:-1
position: 883138
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:883896:-1
position: 883896
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883138-883896:-1:exon

AWJ20_280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_280
product: hypothetical protein
transcript id: XM_018879769.1
SIO_010081: AWJ20_280
subclass of: SO_0000673
so part of: AWJ20_280
location: complement(<883138..>883896)
location: region:883138-883896:-1
so has part: feature:883138-883896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:883138-883896:-1:exon

AWJ20_280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_280
codon start: 1
product: hypothetical protein
translation: MLSRTLRSVSSAPNLRQRAAGSALSAVSTPPPPVPKLPSTYIRTAHLHQSAKATKPSNLLTNNSKYMSLSVAALRAECKKRGVKVGGRKAELVDRLMSVDASQRVQTISTTAKKQAKGDDSSIDYYKVPHPEPEKYKPAFKVPVLPDSAGASSKEVPQPEFNTSAPDHGVADHVEGKVSGTKDAPKVHVPGSTEEGIGEDESPLESSSGGTSSGSGEFSSGDKTFLVGFAVAVTAWWFLPFGSKKKKKPTPE
SIO_010081: AWJ20_280
subclass of: SO_0000673
so part of: AWJ20_280
location: complement(883138..883896)
location: region:883138-883896:-1
so has part: feature:883138-883896:-1:exon

XP_018734524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:883138-883896:-1:exon

AWJ20_281
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PLC2
locus tag: AWJ20_281
so part of: sequence
location: <885257..>886156
location: region:885257-886156:1
so has part: feature:885257-886156:1:exon
subclass of: SO_0000010

30034762
type: Gene
SIO_000068: ncbigene

position:885257:1
position: 885257
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:886156:1
position: 886156
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885257-886156:1:exon

AWJ20_281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PLC2
locus tag: AWJ20_281
product: 1-phosphatidylinositol phosphodiesterase
transcript id: XM_018879780.1
SIO_010081: AWJ20_281
subclass of: SO_0000673
so part of: AWJ20_281
location: <885257..>886156
location: region:885257-886156:1
so has part: feature:885257-886156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885257-886156:1:exon

AWJ20_281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PLC2
locus tag: AWJ20_281
inference: similar to AA sequence:KEGG_Orthology:K01771
codon start: 1
product: 1-phosphatidylinositol phosphodiesterase
translation: MVDYSNWLRDVSDDTKLSTLSIPGTHNSAAYHMALPSVQCQDASITEQLENGVRFLDIRVSKNILHSDDQQYNLVVCHGKFPIKLLGNVELSEALDEVYKFLDSHRSETVIVSIKQEGSGTWDNDHDEFGNCIWDRYVNKNKDKWYLGTDIPKVGDTRGKAVLFRRFGVKDQQRKSQFGFEASWWTYNTSNDDRGNLQVQDWCEINKPEDIGTKANYVKEHIKRAVDYNSTNTDSQKLFVNFCSGSNFFDHECWPQKIAEGLDQDKIDETFGKGSGILVLDYAKTNDWRIVREYVNKNF
SIO_010081: AWJ20_281
subclass of: SO_0000673
so part of: AWJ20_281
location: 885257..886156
location: region:885257-886156:1
so has part: feature:885257-886156:1:exon

XP_018734525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:885257-886156:1:exon

AWJ20_282
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MET16
locus tag: AWJ20_282
so part of: sequence
location: <886728..>887561
location: region:886728-887561:1
so has part: feature:886728-887561:1:exon
subclass of: SO_0000010

30034773
type: Gene
SIO_000068: ncbigene

position:886728:1
position: 886728
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:887561:1
position: 887561
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886728-887561:1:exon

AWJ20_282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MET16
locus tag: AWJ20_282
product: phosphoadenylyl-sulfate reductase (thioredoxin)
transcript id: XM_018879791.1
SIO_010081: AWJ20_282
subclass of: SO_0000673
so part of: AWJ20_282
location: <886728..>887561
location: region:886728-887561:1
so has part: feature:886728-887561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886728-887561:1:exon

AWJ20_282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MET16
locus tag: AWJ20_282
inference: similar to AA sequence:KEGG_Orthology:K00390
note: 3'-phosphoadenylsulfate reductase; reduces 3'-phosphoadenylyl sulfate to adenosine-3',5'-bisphosphate and free sulfite using reduced thioredoxin as cosubstrate, involved in sulfate assimilation and methionine metabolism; GO_component: GO:0005737 - cytoplasm [Evidence IC] [PMID 3060034]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA,IEA]; GO_function: GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IMP] [PMID 2203779]; GO_function: GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IDA] [PMID 3060034]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0019344 - cysteine biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0070814 - hydrogen sulfide biosynthetic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0009086 - methionine biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]; GO_process: GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IMP] [PMID 197388]; GO_process: GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IDA] [PMID 3060034]; GO_process: GO:0000096 - sulfur amino acid metabolic process [Evidence IMP] [PMID 1101032]
codon start: 1
product: phosphoadenylyl-sulfate reductase (thioredoxin)
translation: MSPSVVASIPAQNTGGQVSETQTVPKVTFTAKQLEHINKFAENMSAEEIIRWSIMTIPGLYQTTAFGLTGLVTLDIISKLFPDTHPIDLVFVDTLHHFQETLDLIERIKVRYPNVKLHIYKPDGCETREDFTKEFGPELWETNDTFYDYLVKVEPVQRAYSELNISAVFTGRRKTQGGQRGSIPIIEVVENGLIKINPLANWSFDQVNEYIKKNDVPYNALLDQGYRSVGDYHSTVPVKDGEDERAGRWKGKKKTECGIHETSRFSEFLKNKTATTV
SIO_010081: AWJ20_282
subclass of: SO_0000673
so part of: AWJ20_282
location: 886728..887561
location: region:886728-887561:1
so has part: feature:886728-887561:1:exon

XP_018734526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:886728-887561:1:exon

AWJ20_283
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DPH2
locus tag: AWJ20_283
so part of: sequence
location: <887930..>889669
location: region:887930-889669:1
so has part: feature:887930-889669:1:exon
subclass of: SO_0000010

30034784
type: Gene
SIO_000068: ncbigene

position:887930:1
position: 887930
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:889669:1
position: 889669
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887930-889669:1:exon

AWJ20_283
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DPH2
locus tag: AWJ20_283
product: Dph2p
transcript id: XM_018879802.1
SIO_010081: AWJ20_283
subclass of: SO_0000673
so part of: AWJ20_283
location: <887930..>889669
location: region:887930-889669:1
so has part: feature:887930-889669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887930-889669:1:exon

AWJ20_283
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DPH2
locus tag: AWJ20_283
inference: similar to AA sequence:KEGG_Orthology:K17866
note: Protein required for synthesis of diphthamide; required along with Dph1p, Kti11p, Jjj3p, and Dph5p; diphthamide is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); may act in a complex with Dph1p and Kti11p; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA,IEA]; GO_process: GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IMP] [PMID 15485916]; GO_process: GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IMP] [PMID 8406038]
codon start: 1
product: Dph2p
translation: MSEISIAAPVLSTESEFDKVALAARSRPSPSEDDLIKVYNLDQLVNKIVENDYKSIALQFPDDLIQDSTYISRFLSQQFLKLEGQQTRNVYILADTSYSPCCIDEVAAKHVNADVVVHFGNACLNPVRSFPVIYVFDSTVNVDMDLVETKFVEAFEEDPNQHILLVAETNYSIILNDLYERVKAKFPNCLPSSVNALHDDTQSDETTSAPTASCQSCSGSNGSSCCNATGNGSKDKSNCHSCSDKPSDTKTSPSVYFIPTLDIPALHTESTFLPTRRHPSLKTDLSDYKAFFITSPSPSSSFVLHLSTLVSSVTLLDVDTLKLSTPRTTLQKRYRYMNVARSASTIGLLINTLSLRNVNEVLARLKTWITQAGKKHYTFVVGKPNVPKLANFDVVDIWVVLGCSMGGIIVDCDKFYKPIITPYELNLALQSEVAWTGQWLIDFEAVLKMSSGEEDQVSSDISSDDDDAPVFDPISGKYVSTSKPLRRRAHIDIERDSSDTVNAPSDTSNSTNALATRLSSQLAIRGTVSTAAEYLHNKTTWNGLGSDFDESVDSSEGATVKEGRGGIARGYRVGETDRT
SIO_010081: AWJ20_283
subclass of: SO_0000673
so part of: AWJ20_283
location: 887930..889669
location: region:887930-889669:1
so has part: feature:887930-889669:1:exon

XP_018734527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887930-889669:1:exon

AWJ20_284
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SEN1
locus tag: AWJ20_284
so part of: sequence
location: complement(<889766..>897309)
location: region:889766-897309:-1
so has part: feature:889766-897309:-1:exon
subclass of: SO_0000010

30034795
type: Gene
SIO_000068: ncbigene

position:889766:-1
position: 889766
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:897309:-1
position: 897309
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889766-897309:-1:exon

AWJ20_284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SEN1
locus tag: AWJ20_284
product: putative DNA/RNA helicase SEN1
transcript id: XM_018879812.1
SIO_010081: AWJ20_284
subclass of: SO_0000673
so part of: AWJ20_284
location: complement(join(<889766..892799,893153..>897309))
location: region:889766-897309:-1
so has part: feature:893153-897309:-1:exon
so has part: feature:889766-892799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893153-897309:-1:exon

position:893153:-1
position: 893153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:889766-892799:-1:exon

position:892799:-1
position: 892799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AWJ20_284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SEN1
locus tag: AWJ20_284
inference: similar to AA sequence:KEGG_Orthology:K10706
note: Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p); complex interacts with the exosome to mediate 3' end formation of some mRNAs, snRNAs, snoRNAs, and CUTs; has a separate role in coordinating DNA replication with transcription, by associating with moving replication forks and preventing errors that occur when forks encounter transcribed regions; homolog of Senataxin, which is implicated in Ataxia-Oculomotor Apraxia 2 and a dominant form of ALS; GO_component: GO:0035649 - Nrd1 complex [Evidence IDA] [PMID 16427013]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 23222640]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 23222640]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 8544822]; GO_component: GO:0005657 - replication fork [Evidence IDA] [PMID 23141540]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0043141 - ATP-dependent 5'-3' DNA helicase activity [Evidence ISS] [PMID 10545196]; GO_function: GO:0032575 - ATP-dependent 5'-3' RNA helicase activity [Evidence ISS] [PMID 10545196]; GO_function: GO:0008094 - DNA-dependent ATPase activity [Evidence ISS] [PMID 10545196]; GO_function: GO:0008186 - RNA-dependent ATPase activity [Evidence ISS] [PMID 10545196]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 23222640]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0019904 - protein domain specific binding [Evidence IDA,IMP] [PMID 22286094]; GO_process: GO:0006353 - DNA-templated transcription, termination [Evidence IMP] [PMID 23748379]; GO_process: GO:0031124 - mRNA 3'-end processing [Evidence IMP] [PMID 11565036]; GO_process: GO:0006378 - mRNA polyadenylation [Evidence IMP] [PMID 22123738]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]; GO_process: GO:0045005 - maintenance…
codon start: 1
product: putative DNA/RNA helicase SEN1
translation: MAPTPTEIAQQAYEEALKLNQDWVENTSIQHLFLASVSSAKALLAQTKLAEQSHVEWCHWFCDEKWRPLAANALFVLSMDGSKQAIGLYDKLGLVVSKCASCGAFYHLEFEKTRIMLKQRLHIGDDKISIFERAVQAQDKDRLLSVFQDLSDWKKTFEQENVGVSIPIEKRASFFVPMVECLYCPWLFSPLNLACTSGDDDKLYTLFKEAFTLFEDAKVYDPVIIKTRHSFCLGAEVLFFSMEPKIHQLAKSVIMRFTCISVNSDKSPEVCVLYPNLTSNMVGLINDTALQVMEYMGPIKPGLAENPFSQLINVNNPSVLYLLNASYFVGMLYFCRNKNYLKIELKDVLDPSDNFLNLLRNCLSYTPSDESTGRFSMALSALNTLLLWKPVDLMYLTTKLAPLTFKDIAQSMLTQSNQLFSSGKARLISNLSSVAIFPSYDVTYEFGISDWYNWLNAIFKADLPGHGPRSQGQNGSQENSQGRSTSPVTASESATGDSSLASQPSQPSSALAVDENTKLNICNIILNVLDRHITSLPVQTEAAKRSSLIRRFLIVAISGLDFPKSVENGLPKISDVSRLMRATIRGIVDKGSRYILDSRSSRDLLPLVYQLIRQCLEFDIISSIGAAVTKASTPNVGDKSASNSARPSNGLWQAINRMPRLFDVDFTTNILKGLKLAAFTFESPTLANNSPIQPDVLNQAADSLRIISELDPVVIRKVFKDRDALVSVFLSSFSGSIELSDLAIDVICQTLDETSSRSEAFKQLLRDDPKLVVRSFNEAVDLVRSVGMFSPCAKLIKVSQDFVDALYSPHGGVVDGRFKADLTKDIEENELLQYWLKTWSFLQFTFKNTRNWGETYIMSTMKDFFREEAHYCQTLLDQFRLFEVDLPFEADPNISHGERLALPVASTIELMCDLLRLRDTQLLDACFRNIISIIELMKSFNVKLPESLVEVFKRCSSGKITNKLSQDNIAQLLAALNSMGVLSEAEIETIQMESQMRKKKSGSVSVTPAHTQSPPPGSGLTLANLPLRSGSTVKAPAISIKGVSSRQRTLLDMYQKTPDGRPPPVVIPPHSSSVQPSAPPRTSAMDLLRESVKQNRMSSTGAAMLAATSSKPPAKEIHPPRPPGFNSRRTVLPSSSASSTPAPSSLNSSDVSDQSDDESDDGLFTEKKAADTGPKMRNINRPGFRINTANMTRKGTPTVAQKQLEKRLMQQRLNIDMGPLHKEVLSWDYFARNDYFQKSKGQLKPVQSEFKSVEDYQSTFTPLLMLECWEGIQKVKEENVGRVPFKIQVGKRVKCDDFYDVYASVSMKEFQIIKLGESDLIVLSYHTNLEVKALMPQHNVPHCYARIQQINLHQDYADLILRTYEPGKMIGYLSQNCVICGLKASSPPGTGKTKTILAIAGAYLTSAIPALSQFDDDVPNTRRILVCAPSNAAVDELVLRFKSGIIGSHGKVFEPSVVRLGRSDAVNIQVRDVTLEELLDKMVEKNSDENGRQDDNSVREKQQAIIKERNELRRKIDNTQDISGEEYSKLSEEIRVLSKQIKDLSRQLDVQREQRTTAARMREAQRRKFQDQILRDAQVICCTLSGSSHKVLSSLKMRFDTVIIDEAAQSVELSALIPLRYGCTRCIMVGDPNQLPPTVLSQAASNLKYEQSLFVRMFEKFPERVYLLDTQFRMHPDISEFASREFYGGRLYNGDGMASLTARAWHSNPMLAPYKFFDVVGSQKKSIDTKSMYNTEEAEAAYALYEMLFKTCSENGIHDLAGKVGIISPYKRQVKELRFVFRAHLGEAASNQIDFNTIDGFQGQEKDVIILSCVRAQPDAQGVGFLGDTRRMNVAITRAKSSMWILGNENNLVKNPVWKRLIGDARQRNMFVKLRADVQESLQEQIIARATQQARAQIEQRTPDVQAQSVAREAHADNLAKRLAEDQIIKEEGDKKLKIDAAPAVTEEPVLSKKERKRLKNAEKKARKLKELELRQMNARDPRFRLYNVSDSSSPSDTSR…
SIO_010081: AWJ20_284
subclass of: SO_0000673
so part of: AWJ20_284
location: complement(join(889766..892799,893153..897309))
location: region:889766-897309:-1
so has part: feature:893153-897309:-1:exon
so has part: feature:889766-892799:-1:exon

XP_018734528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893153-897309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:889766-892799:-1:exon

AWJ20_285
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PRX1
locus tag: AWJ20_285
so part of: sequence
location: complement(<898447..>899124)
location: region:898447-899124:-1
so has part: feature:898447-899124:-1:exon
subclass of: SO_0000010

30034806
type: Gene
SIO_000068: ncbigene

position:898447:-1
position: 898447
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:899124:-1
position: 899124
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898447-899124:-1:exon

AWJ20_285
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PRX1
locus tag: AWJ20_285
product: Prx1p
transcript id: XM_018879823.1
SIO_010081: AWJ20_285
subclass of: SO_0000673
so part of: AWJ20_285
location: complement(<898447..>899124)
location: region:898447-899124:-1
so has part: feature:898447-899124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898447-899124:-1:exon

AWJ20_285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PRX1
locus tag: AWJ20_285
note: Mitochondrial peroxiredoxin with thioredoxin peroxidase activity; has a role in reduction of hydroperoxides; reactivation requires Trr2p and glutathione; induced during respiratory growth and oxidative stress; phosphorylated; protein abundance increases in response to DNA replication stress; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA,ISS] [PMID 10681558]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 10821871]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0016209 - antioxidant activity [Evidence IEA,IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0004601 - peroxidase activity [Evidence IEA]; GO_function: GO:0051920 - peroxiredoxin activity [Evidence IEA,IEA]; GO_function: GO:0008379 - thioredoxin peroxidase activity [Evidence IDA,IMP,ISS] [PMID 10681558]; GO_function: GO:0008379 - thioredoxin peroxidase activity [Evidence IDA] [PMID 10821871]; GO_process: GO:0045454 - cell redox homeostasis [Evidence IDA,IMP] [PMID 10681558]; GO_process: GO:0034599 - cellular response to oxidative stress [Evidence IGI] [PMID 15051715]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0046686 - response to cadmium ion [Evidence IMP] [PMID 19332553]
codon start: 1
product: Prx1p
translation: MSAPPAGTLRLGSTAPNFQADTSNGPIDFHEYLGNSWGILFSHPDDFTPVCTTELGAFAKLEPEFAKRDVKLIGLSANSTDSHKEWIKDIDEVSGSKLSFPIIADPTRKISHLYDMVDYQDTTNVDSKGVAFTIRSVFIIDPKKTIRLILSYPASTGRNTAEVLRVIDSLQTGDKHRITTPINWTPGDDVIVHPSVSNDEAKTLFPKFKIIKPYLRLTPLEVNNN
SIO_010081: AWJ20_285
subclass of: SO_0000673
so part of: AWJ20_285
location: complement(898447..899124)
location: region:898447-899124:-1
so has part: feature:898447-899124:-1:exon

XP_018734529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898447-899124:-1:exon

AWJ20_286
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_286
so part of: sequence
location: <900713..>900812
location: region:900713-900812:1
so has part: feature:900713-900812:1:exon
subclass of: SO_0000663

30034817
type: Gene
SIO_000068: ncbigene

position:900713:1
position: 900713
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:900812:1
position: 900812
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900713-900812:1:exon

AWJ20_286
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_286
product: tRNA-Lys
SIO_010081: AWJ20_286
subclass of: SO_0000673
so part of: AWJ20_286
location: <900713..>900812
location: region:900713-900812:1
so has part: feature:900713-900812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:900713-900812:1:exon

AWJ20_287
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_287
so part of: sequence
location: complement(<901232..>901323)
location: region:901232-901323:-1
so has part: feature:901232-901323:-1:exon
subclass of: SO_0000663

30034828
type: Gene
SIO_000068: ncbigene

position:901232:-1
position: 901232
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:901323:-1
position: 901323
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901232-901323:-1:exon

AWJ20_287
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_287
product: tRNA-Phe
SIO_010081: AWJ20_287
subclass of: SO_0000673
so part of: AWJ20_287
location: complement(<901232..>901323)
location: region:901232-901323:-1
so has part: feature:901232-901323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901232-901323:-1:exon

AWJ20_288
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PCL6
locus tag: AWJ20_288
so part of: sequence
location: complement(<902782..>905577)
location: region:902782-905577:-1
so has part: feature:902782-905577:-1:exon
subclass of: SO_0000010

30034839
type: Gene
SIO_000068: ncbigene

position:902782:-1
position: 902782
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:905577:-1
position: 905577
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902782-905577:-1:exon

AWJ20_288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PCL6
locus tag: AWJ20_288
product: Pcl6p
transcript id: XM_018879853.1
SIO_010081: AWJ20_288
subclass of: SO_0000673
so part of: AWJ20_288
location: complement(<902782..>905577)
location: region:902782-905577:-1
so has part: feature:902782-905577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902782-905577:-1:exon

AWJ20_288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PCL6
locus tag: AWJ20_288
note: Pho85p cyclin of the Pho80p subfamily; forms the major Glc8p kinase together with Pcl7p and Pho85p; involved in the control of glycogen storage by Pho85p; stabilized by Elongin C binding; PCL6 has a paralog, PCL7, that arose from the whole genome duplication; GO_component: GO:0000307 - cyclin-dependent protein kinase holoenzyme complex [Evidence TAS] [PMID 11602261]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity [Evidence TAS] [PMID 11602261]; GO_function: GO:0019901 - protein kinase binding [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0005977 - glycogen metabolic process [Evidence IEA]; GO_process: GO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity [Evidence IEA]; GO_process: GO:0005979 - regulation of glycogen biosynthetic process [Evidence IGI] [PMID 11602261]; GO_process: GO:0005981 - regulation of glycogen catabolic process [Evidence IGI] [PMID 11602261]
codon start: 1
product: Pcl6p
translation: MDEDPHQPEITVIEGTAIDHGLPSGSSSGSGSGSGSVGSGAAAYQYQYLQQQQLAQQAFARQLQNMQHARPVGIPGSGDSSSVPRDGLNMVDVDTGVQGLGQSSVSESPATQNTQNQDQQTQGQVQSQNSQLQSQPQVQVQSQSQFSNQIQGQTQYLAQSHSAIDRERHLHQLQSLQKQQPLPMGSSGSGIGIGLNQFGQQQQQQQQQQQQPGIGPGSSSSFVGSFGQNYPLGPSSRHNSTSNLVQAHALQGGAHSFRDDPSVTSIAAGLVPGSIGTSPGTAATSAFFSPSSGSRLAPHTNLPSSVSSSYKSAQPSNSFSSYSSYPYNGGAASIGASSVGGGGGGGGVVGSSAFNTNFTSFATANSSLNDRTGIYASSPITGDSASENANPAVNSSSSFAGKLVQPGNVVRTSLLTSKLAASSNSGSSNNSTANNTPNNASPSRATVSRQSSFSASGNQQLTTSTSNFPYPNPRTNSRHNSLVASGQPGPFQQQQQPYSSDPVNFSSSGPASSGFSRFTNITNNSGPGSYTPSSATGVSSTPGVPGQVPGQVPAGNNSSGQQNFLPHPSSTTTNISREQVSAASSADTSADFGAVTTHNPSSSPMDTATDEFNTPADSFQPSYQSPSTTSSAVFGNQQQQQQTGSSIHGHTTGQTNELPPITNQGITSQRGTPGTTDDGSGVNIAPGTGSATGDEFNRQYSAAHPGPHLDIANHPVPDVLVMLTVLLQKIIDANDALHPHNYQASEIADTSDRFTANVLAFHGRNIPAISLHAYLSRILKYCPTTNEVFISLLVYFDRIAQRANSGELSPSGVMAGSASGTTNHPGGSTDPDHPDQPQLFVMDSYNIHRLIIAGVTVASKFFSDIFYKNSRYAKVGGLPVDELNHLELQFLLLTDFRLMISLEELQRYADLLLRFWQKEAVHSSPHPMSTI
SIO_010081: AWJ20_288
subclass of: SO_0000673
so part of: AWJ20_288
location: complement(902782..905577)
location: region:902782-905577:-1
so has part: feature:902782-905577:-1:exon

XP_018734530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902782-905577:-1:exon

AWJ20_289
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HSP104
locus tag: AWJ20_289
so part of: sequence
location: <912132..>914804
location: region:912132-914804:1
so has part: feature:912132-914804:1:exon
subclass of: SO_0000010

30034850
type: Gene
SIO_000068: ncbigene

position:912132:1
position: 912132
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:914804:1
position: 914804
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912132-914804:1:exon

AWJ20_289
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HSP104
locus tag: AWJ20_289
product: chaperone ATPase HSP104
transcript id: XM_018879864.1
SIO_010081: AWJ20_289
subclass of: SO_0000673
so part of: AWJ20_289
location: <912132..>914804
location: region:912132-914804:1
so has part: feature:912132-914804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:912132-914804:1:exon

AWJ20_289
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HSP104
locus tag: AWJ20_289
note: Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responsive to stresses including: heat, ethanol, and sodium arsenite; involved in [PSI+] propagation; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; potentiated Hsp104p variants decrease TDP-43 proteotoxicity by eliminating its cytoplasmic aggregation; GO_component: GO:0072380 - TRC complex [Evidence IDA] [PMID 20850366]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 10467108]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 10467108]; GO_function: GO:0043531 - ADP binding [Evidence IMP] [PMID 11867765]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0005524 - ATP binding [Evidence IMP] [PMID 11867765]; GO_function: GO:0042623 - ATPase activity, coupled [Evidence IDA,IMP] [PMID 16135516]; GO_function: GO:0042623 - ATPase activity, coupled [Evidence IMP] [PMID 9674429]; GO_function: GO:0051087 - chaperone binding [Evidence IDA] [PMID 9674429]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA,IEA]; GO_function: GO:0051082 - unfolded protein binding [Evidence IDA] [PMID 16135516]; GO_process: GO:0070370 - cellular heat acclimation [Evidence IMP] [PMID 2188365]; GO_process: GO:0070389 - chaperone cofactor-dependent protein refolding [Evidence IDA] [PMID 9674429]; GO_process: GO:0001319 - inheritance of oxidatively modified proteins involved in replicative cell aging [Evidence IGI,IMP] [PMID 17908928]; GO_process: GO:0034975 - protein folding in endoplasmic reticulum [Evidence IMP] [PMID 10931304]; GO_process: GO:0019538 - protein metabolic process [Evidence IEA]…
codon start: 1
product: chaperone ATPase HSP104
translation: MDQSEFTDRAIKIITDAVQIASDHGHAFVSPVHFLAAMTPDDQDGTPSYLRTVTEKARYDWKPLERIINKHLVRIPSQSPAPPKPELTSQSANIIQSAANIRAKQKDTFTAQDHILLALLDDTSIQAIFKEVSIDIKALQSQVQAIRGNRRIDSRMADSSEQFEFLSKYALDLTTMAREGKIDPVIGREEEIRRCIRVLARRTKSNPCLIGDPGVGKTSIVEGVAQRIIDGDVPNVLANTRLFSLDLGALKAGAKYQGDFEERVKGVLTEIEESKDMIVLFIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTVEEYRKYIEKDGAFERRFQKIDVPEPTIPETIAILRGLQGKYELHHGVRILDSALVTAAQLASRYLTYRKLPDSAVDLIDETAASVAVARDSKPEELDTLERQLQLLQVEIKALERDSGTDATTGDRLSAARQKAASLEEQLAPLRERFQEERKGHEELSSLKKKLDELETKAQDAERRRDTGASADLRYFAIPDIKRRIDEIERTIDDKSDSTLLEDIVDSDKVAETAARLSGIPVSKLTQAENSKLINMEKTLSKQVVGQTEAVKAVSNAIRLSRSGLSNPNAPASFLFMGLSGSGKTELAKKVAGFLFADEKAMIRIDCSELADKWSASKLLGAAPGYVGYEEGGILTEALARKPYSVVLFDELEKAAPEVLTILLQILDDGRVRSSSGKVVNAANCIIIMTSNLGAESINRSSSSKIDPITRDQVMEAVRAHFRPEFLNRISSMIIFNRLSKKAIRKIVELRISEIEKRFVSSNKNIHLDLDDACYDYLVENGYSKDLGARPLNRLIQNEILNKLALLMLRGQVQDNETVKITLGDRGLELIPNHEPATTDEEYMEVDSDSDMDDIPALD
SIO_010081: AWJ20_289
subclass of: SO_0000673
so part of: AWJ20_289
location: 912132..914804
location: region:912132-914804:1
so has part: feature:912132-914804:1:exon

XP_018734531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:912132-914804:1:exon

AWJ20_290
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_290
so part of: sequence
location: complement(<913598..>913825)
location: region:913598-913825:-1
so has part: feature:913598-913825:-1:exon
subclass of: SO_0000010

30034862
type: Gene
SIO_000068: ncbigene

position:913598:-1
position: 913598
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:913825:-1
position: 913825
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913598-913825:-1:exon

AWJ20_290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_290
product: hypothetical protein
transcript id: XM_018879876.1
SIO_010081: AWJ20_290
subclass of: SO_0000673
so part of: AWJ20_290
location: complement(<913598..>913825)
location: region:913598-913825:-1
so has part: feature:913598-913825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:913598-913825:-1:exon

AWJ20_290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_290
codon start: 1
product: hypothetical protein
translation: MSLEFSAWVSLDTGMPERRAAVSATLSESTISSNKVESDLSSIVLSISSILRLISGIAKYLKSAEAPVSLRRSAS
SIO_010081: AWJ20_290
subclass of: SO_0000673
so part of: AWJ20_290
location: complement(913598..913825)
location: region:913598-913825:-1
so has part: feature:913598-913825:-1:exon

XP_018734532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:913598-913825:-1:exon

AWJ20_291
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TIF6
locus tag: AWJ20_291
so part of: sequence
location: complement(<915066..>915644)
location: region:915066-915644:-1
so has part: feature:915066-915644:-1:exon
subclass of: SO_0000010

30034873
type: Gene
SIO_000068: ncbigene

position:915066:-1
position: 915066
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:915644:-1
position: 915644
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915066-915644:-1:exon

AWJ20_291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TIF6
locus tag: AWJ20_291
product: translation initiation factor 6
transcript id: XM_018879887.1
SIO_010081: AWJ20_291
subclass of: SO_0000673
so part of: AWJ20_291
location: complement(<915066..>915644)
location: region:915066-915644:-1
so has part: feature:915066-915644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:915066-915644:-1:exon

AWJ20_291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TIF6
locus tag: AWJ20_291
inference: similar to AA sequence:KEGG_Orthology:K03264
note: Constituent of 66S pre-ribosomal particles; has similarity to human translation initiation factor 6 (eIF6); may be involved in the biogenesis and or stability of 60S ribosomal subunits; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11238882]; GO_component: GO:0005730 - nucleolus [Evidence IEA,IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 17353896]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 11238882]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 11583614]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 16188229]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 17443350]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 22735702]; GO_component: GO:0030687 - preribosome, large subunit precursor [Evidence IDA] [PMID 23212245]; GO_function: GO:0043023 - ribosomal large subunit binding [Evidence IEA]; GO_function: GO:0043023 - ribosomal large subunit binding [Evidence IDA] [PMID 9891075]; GO_function: GO:0043022 - ribosome binding [Evidence IEA]; GO_function: GO:0003743 - translation initiation factor activity [Evidence IEA,IEA]; GO_process: GO:1902626 - assembly of large subunit precursor of preribosome [Evidence IMP] [PMID 22735702]; GO_process: GO:0000466 - maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 11238882]; GO_process: GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 11238882]; GO_process: GO:0042256 - mature ribosome assembly [Evidence IEA,IEA]; GO_process: GO:0006364 - rRNA processing [Evidence IGI] [PMID 17353896]; GO_process: GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]; GO_process: GO:0042273 - ribosoma…
codon start: 1
product: translation initiation factor 6
translation: MCQTTIAGTRIVGRMTAGNRRGLLVPIQTTDQELQHLRNTLPDTVRIQRVEERLSALGNVICCNDYVALVHPDIERETEELIADVLGVEVFRQTVAGNVLVGSYASITNQGGLVHPQTSVQDQEELSSLLQIPLVAGTVNRGSAVIGGGMVANDWLAVVGLDTTAPELHVVESIFGLNNETPEKDMLIEHYY
SIO_010081: AWJ20_291
subclass of: SO_0000673
so part of: AWJ20_291
location: complement(915066..915644)
location: region:915066-915644:-1
so has part: feature:915066-915644:-1:exon

XP_018734533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:915066-915644:-1:exon

AWJ20_292
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_292
so part of: sequence
location: complement(<917035..>918666)
location: region:917035-918666:-1
so has part: feature:917035-918666:-1:exon
subclass of: SO_0000010

30034884
type: Gene
SIO_000068: ncbigene

position:917035:-1
position: 917035
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:918666:-1
position: 918666
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917035-918666:-1:exon

AWJ20_292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_292
product: hypothetical protein
transcript id: XM_018879897.1
SIO_010081: AWJ20_292
subclass of: SO_0000673
so part of: AWJ20_292
location: complement(<917035..>918666)
location: region:917035-918666:-1
so has part: feature:917035-918666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917035-918666:-1:exon

AWJ20_292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_292
codon start: 1
product: hypothetical protein
translation: MKAHKRQRQDSGDATNVLDVTGLLEGGVAGLLADKNENGQQGGIISGKVIDPALSGALETGNHRHQTGNTEKDLGGLESDANSRHGRDMENHDDEARLRIALEQHNAVAASVGVGVGADVDVVDTTGSDPASRILSSSHGTGVLGVPRTAALAVANAINGTNPAVGSRSNSGGSSIRTNLDHPQVADQSVGQRSEEAQTSDQNSQNELMVDFSFGPNGEPIDPKKVCQFCGRMFSHPGSLGRHLDLKRGNRLHPAALVDRIRGDVKRRGDPVEVKNRRAQRARLYNSREDVKQRAKLRRKEREKTESARAVARLNFIQRLGFPPQAGDDGAKVLDPTMIDTHDSSSVLAAGNGTGTGSGSGSSGTGGLVVDRTDSNSLIGSVDILSKKYRSSFAYFTLFFLQSNAWPYGNDLPSEEHYNQVSTVLATVVEPLDPETAAIYRVKLDVAYQEWAKLGDADKRAIWTLCLRRILESTLGSFSPYNIATRDTWLALEEDRILDLSSAADSPSATAVTPTTQHDPSDASPQDMAVAFASAAVTSGSPL
SIO_010081: AWJ20_292
subclass of: SO_0000673
so part of: AWJ20_292
location: complement(917035..918666)
location: region:917035-918666:-1
so has part: feature:917035-918666:-1:exon

XP_018734534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:917035-918666:-1:exon

AWJ20_293
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_293
so part of: sequence
location: complement(<921323..>922939)
location: region:921323-922939:-1
so has part: feature:921323-922939:-1:exon
subclass of: SO_0000010

30034895
type: Gene
SIO_000068: ncbigene

position:921323:-1
position: 921323
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:922939:-1
position: 922939
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921323-922939:-1:exon

AWJ20_293
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_293
product: E3 ubiquitin-protein ligase MARCH5
transcript id: XM_018879908.1
SIO_010081: AWJ20_293
subclass of: SO_0000673
so part of: AWJ20_293
location: complement(<921323..>922939)
location: region:921323-922939:-1
so has part: feature:921323-922939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921323-922939:-1:exon

AWJ20_293
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_293
codon start: 1
product: E3 ubiquitin-protein ligase MARCH5
translation: MSDRLESVSPGLRPLNQEDYRCWICLGTADEPPPHNQKDHHWCRPCRCNLVSHQTCLLEWAAEVASTNPRSLLYNSGPKTPQCPQCKSAIHIAKSKSLFIQLRDRIEAANASGFQLFFVTVIGGSIASAVYTSLYALGAASIRCICPRDMALPLLGISVTDQFVQIQPLSVRRMLLVPSIPIVLLLSGSRSTFADVVTLLMPLTLSDGDHLPWKLTGPRLTMALLPLARIGYHVLYDSLVEPIIQLCAARIRPSFSQGLTGRGDGEGAGVELAFDDDDNNGGPLRALGVNFEIVLHDENAGGAGDDPAGNIGDGIADEDGNNDNMNGLAGAGPDQAGRRGGRVGQRRNILTLLLGRLGVLVANALDRAVLPAAAVDNAIPPVIQDDDAIPPVGQDQVNGNLDDPLAGQLNNANQDNNNNNNNNIANGQAENNNGGPADARLVRRQRAADWVFSSQGWSLRAGNTLLLPLFSGIMGSGLSLIPAFRRLVPDKFNRNIIGGMLIIVLRDLVNIATALLRVRQENSRRVLDYVELAARGLD
SIO_010081: AWJ20_293
subclass of: SO_0000673
so part of: AWJ20_293
location: complement(921323..922939)
location: region:921323-922939:-1
so has part: feature:921323-922939:-1:exon

XP_018734535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:921323-922939:-1:exon

AWJ20_294
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_294
so part of: sequence
location: <924187..>925302
location: region:924187-925302:1
so has part: feature:924187-925302:1:exon
subclass of: SO_0000010

30034906
type: Gene
SIO_000068: ncbigene

position:924187:1
position: 924187
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:925302:1
position: 925302
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924187-925302:1:exon

AWJ20_294
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_294
product: hypothetical protein
transcript id: XM_018879919.1
SIO_010081: AWJ20_294
subclass of: SO_0000673
so part of: AWJ20_294
location: <924187..>925302
location: region:924187-925302:1
so has part: feature:924187-925302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:924187-925302:1:exon

AWJ20_294
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_294
codon start: 1
product: hypothetical protein
translation: MVYTLKWGILATGGIATTFAKDILADPGLRNVSDVKHEIVAVASSSSAERAKKFAEEVGAPSAAAYGNYEQLVADKNVDVIYVATPHSHHYQNAKLALEAGKNVLCEKPFTINAKQLKHLVKIAREKKLFLMEAVWTRYFPMTLELQKLLFKDRIIGKILRVSSDLAVPFNIPNDFDPKHRMKNPELGGGALLDLGIYSLTWIFITAFAEPENKRQAPKVNGSILFTKDTKVDEHTTVNLIFPESHVSAVATTSMTGLSEHDNVCLIQGEKGYIKVDFPTYRPEGFTINLYQDGIKGSGKNLKTEHKSYPIPGGHGMHWEADEVARCLRDGKLESSLMPLDESIIIAEAMDKVREVNDFKYPAALEAVDQY
SIO_010081: AWJ20_294
subclass of: SO_0000673
so part of: AWJ20_294
location: 924187..925302
location: region:924187-925302:1
so has part: feature:924187-925302:1:exon

XP_018734536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:924187-925302:1:exon

AWJ20_295
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_295
so part of: sequence
location: complement(<925546..>926142)
location: region:925546-926142:-1
so has part: feature:925546-926142:-1:exon
subclass of: SO_0000010

30034917
type: Gene
SIO_000068: ncbigene

position:925546:-1
position: 925546
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:926142:-1
position: 926142
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925546-926142:-1:exon

AWJ20_295
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_295
product: hypothetical protein
transcript id: XM_018879930.1
SIO_010081: AWJ20_295
subclass of: SO_0000673
so part of: AWJ20_295
location: complement(<925546..>926142)
location: region:925546-926142:-1
so has part: feature:925546-926142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:925546-926142:-1:exon

AWJ20_295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_295
inference: similar to AA sequence:KEGG_Orthology:K06910
codon start: 1
product: hypothetical protein
translation: MHVFVEKIFGFVLPKIFTPPTEDMLLKNKPSLAKIPTELVVTSSAFEDGQHMPWKYGGEGVGEDTSPPLTVENIPSDTGSLVFVLQDLDVPLPKPITHTVAYNLPVQKEFPEGYFDSKESSDKLTCGKAFRGHTGYLGPRPIINHGPHRYYFTIYAIKQEAPRLNPLVEEPELIAYLEKWAVSTGTVIGTFERTDAKH
SIO_010081: AWJ20_295
subclass of: SO_0000673
so part of: AWJ20_295
location: complement(925546..926142)
location: region:925546-926142:-1
so has part: feature:925546-926142:-1:exon

XP_018734537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:925546-926142:-1:exon

AWJ20_296
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HNT1
locus tag: AWJ20_296
so part of: sequence
location: <928388..>928954
location: region:928388-928954:1
so has part: feature:928388-928954:1:exon
subclass of: SO_0000010

30034928
type: Gene
SIO_000068: ncbigene

position:928388:1
position: 928388
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:928954:1
position: 928954
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928388-928954:1:exon

AWJ20_296
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HNT1
locus tag: AWJ20_296
product: Hnt1p
transcript id: XM_018879941.1
SIO_010081: AWJ20_296
subclass of: SO_0000673
so part of: AWJ20_296
location: <928388..>928954
location: region:928388-928954:1
so has part: feature:928388-928954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928388-928954:1:exon

AWJ20_296
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HNT1
locus tag: AWJ20_296
note: Adenosine 5'-monophosphoramidase; interacts physically and genetically with Kin28p, a CDK and TFIIK subunit, and genetically with CAK1; member of the histidine triad (HIT) superfamily of nucleotide-binding proteins and similar to Hint; protein abundance increases in response to DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IDA] [PMID 11805111]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence ISS] [PMID 9164465]; GO_process: GO:0009117 - nucleotide metabolic process [Evidence IDA] [PMID 11805111]
codon start: 1
product: Hnt1p
translation: MFSEECPFCDIAASNRPGSLESTSTVFYSTEHVLAFLDIQPLVSSAAHVLVTSRKHYKTLDELASDPDTSAALGIALAKVSKALKTQFGAEAFNIVQNNGSAAGQVVPHVHFHVVIRKQQTNPPSTLPKSADLMKTLLSAPSYDSLDFKTKMAYSSLIFGRGTRQDLDDSWAATLVPQLRTALSSPKL
SIO_010081: AWJ20_296
subclass of: SO_0000673
so part of: AWJ20_296
location: 928388..928954
location: region:928388-928954:1
so has part: feature:928388-928954:1:exon

XP_018734538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928388-928954:1:exon

AWJ20_297
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CLB2
locus tag: AWJ20_297
so part of: sequence
location: complement(<929217..>931241)
location: region:929217-931241:-1
so has part: feature:929217-931241:-1:exon
subclass of: SO_0000010

30034939
type: Gene
SIO_000068: ncbigene

position:929217:-1
position: 929217
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:931241:-1
position: 931241
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929217-931241:-1:exon

AWJ20_297
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CLB2
locus tag: AWJ20_297
product: B-type cyclin CLB2
transcript id: XM_018879952.1
SIO_010081: AWJ20_297
subclass of: SO_0000673
so part of: AWJ20_297
location: complement(<929217..>931241)
location: region:929217-931241:-1
so has part: feature:929217-931241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:929217-931241:-1:exon

AWJ20_297
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CLB2
locus tag: AWJ20_297
inference: similar to AA sequence:KEGG_Orthology:K02220
codon start: 1
product: B-type cyclin CLB2
translation: MSRQLRNRTRIGNENDENNNVGLVARARAKAVELDSNSNGINRLDKKPLGNLSANNNVNGNIAVGGVQDNVTRMTTRRRAALGDVSNVSKKTDPAAAGAATKGGLGIRAGSTVTNPTRASLLRSRNNGVTSNSSATAAGVASTTGNINTNGTARPGLTKTGADGGVATRTALRTTSWTSAGAGTGAGNHARHALNNGLNNSNIHSNGASNGASNAAAYRSASVGAASNTVANTASNAGEVDQITTKNIHLLDESSNSRASKRPKTSAMSGLVSSSSSSLSNDSTTNSSRLARNNTDTAASTSTSTSTGSSTNTLSSRNHSRPLAEIPLLEVPVPSRNSMARPSVLGKVAQTSTSRLSVASSASSSKQESETITSTHGTAEASSNSLVATTTTSPVQDWDDLDAEDFDDPLMVSEYVVEIFEFLYKSQYTYMPDADYVRNQTYFTWSMRDILVDWLGEVHTRFRLLPETLFLAVNIFDRYMSSVDVPGDEIQTIGITSMFIAAKYEEVFTPSVANFAYMVDNLAEEDILEAERGILRVLEFRNSYPNPMNFLRRISKADDYDINTRTIGKYLLEISLFEHRLLKYTPAEHSAAAMFLARRMLKRPSWDANMKHYSGGYDEESLKPILAIIVDYLVSAVTHEAFFRKYAHKRFLKASIIARTWAKENRLHYQLPSS
SIO_010081: AWJ20_297
subclass of: SO_0000673
so part of: AWJ20_297
location: complement(929217..931241)
location: region:929217-931241:-1
so has part: feature:929217-931241:-1:exon

XP_018734539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:929217-931241:-1:exon

AWJ20_298
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_298
so part of: sequence
location: <934497..>937007
location: region:934497-937007:1
so has part: feature:934497-937007:1:exon
subclass of: SO_0000010

30034950
type: Gene
SIO_000068: ncbigene

position:934497:1
position: 934497
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:937007:1
position: 937007
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934497-937007:1:exon

AWJ20_298
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_298
product: hypothetical protein
transcript id: XM_018879963.1
SIO_010081: AWJ20_298
subclass of: SO_0000673
so part of: AWJ20_298
location: <934497..>937007
location: region:934497-937007:1
so has part: feature:934497-937007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934497-937007:1:exon

AWJ20_298
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_298
codon start: 1
product: hypothetical protein
translation: MKSRIPSRLRTFVGNTARSLSPGPSREPSSKDGLDQRRPLSVQEDVEADVDDDDDESSFSTEEEDEDEDDLTEDLQDLRIKPSTSISSKQSRHFTINDADSIIGGHSIGGGSRIDSDEELLPIDDEALIEEAVEEEEDDGPIEDVLEDDMVDAEETRQREREEKGLRRSYSEGSRSVDVGSSNNDSNVTFASTSVEGDGSINKEARHDSVLVAGVGSGVGSGVGSGARAGPRSNLGIDTAAANSTTKARAAPKSASQAERGSFGTGYGVNKGRSRSGTFQEAYRARARSFSSSKYISHIKQQKVFSFSLPFNNPLANLEMPSFTSSLDLPTINFRSMIFNSNADSGSDIHKDSLSEYADLDSDEEDLKYSAIKRQDNTRVRAVRHTLSRNFSLPLSPARQDTFPDIQGDVVIMGGYRGSILRDSKTKKRIWIPIKAGLNMRKIDLTVGITDQDEYDMPTEHIYPDGMLTHIGPIDISRRLIRKMTEQPGCRVHEFGYDWRLSSDINSQRLRQFLKKIKQKSKNHKPAIVIAHSMGGLIAHHAMQNEPELFRGLLYAGVPSSCPNILGPLRYGDSVLLSSRILTAKVNFLMRSSYVFLPLNGRCFVDKHDKTKRYDLDFFDVNTWVEYGLSPCVSPIAEVRASACRQLQPSSSTTPSSTSVIQDRIQDKLRAAAKTTFPSLTNSPDMPIPFDEAKEYLDRTLKRTKKFINELTEVHPDKSYPPLAVIYGCTLPTLRGARVDGPEGIKEGDYDHLFFGAGDGVVYRKTLMPDYYGFPVVVKVPSDASHVTLLTDIDGVGRALAGILEEEALRNKTNSTTKHRSGAQHASTMPVQATTY
SIO_010081: AWJ20_298
subclass of: SO_0000673
so part of: AWJ20_298
location: 934497..937007
location: region:934497-937007:1
so has part: feature:934497-937007:1:exon

XP_018734540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:934497-937007:1:exon

AWJ20_299
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: JJJ3
locus tag: AWJ20_299
so part of: sequence
location: complement(<937234..>937743)
location: region:937234-937743:-1
so has part: feature:937234-937743:-1:exon
subclass of: SO_0000010

30034961
type: Gene
SIO_000068: ncbigene

position:937234:-1
position: 937234
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:937743:-1
position: 937743
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937234-937743:-1:exon

AWJ20_299
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: JJJ3
locus tag: AWJ20_299
product: Jjj3p
transcript id: XM_018879974.1
SIO_010081: AWJ20_299
subclass of: SO_0000673
so part of: AWJ20_299
location: complement(<937234..>937743)
location: region:937234-937743:-1
so has part: feature:937234-937743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:937234-937743:-1:exon

AWJ20_299
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: JJJ3
locus tag: AWJ20_299
inference: similar to AA sequence:KEGG_Orthology:K17867
note: hypothetical protein; contains a CSL Zn finger and a DnaJ-domain; involved in diphthamide biosynthesis; ortholog human Dph4; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0008198 - ferrous iron binding [Evidence IDA] [PMID 22367199]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_process: GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IMP] [PMID 15485916]
codon start: 1
product: Jjj3p
translation: MSSGLNLYEILGIRQWHGRENEISDDEIKQAYREALLESHPDKRQQRNEDHSTISIEEIRKAYTILSDPVARKEYLIRLQSGSHGTAPSGRGFVQLGDAVDLDDMTIHEDILNSSGETTTKWTKACRCGHSQGYVVWESDLLNNGSADEIKVPCVGCSLWITVQYSVEE
SIO_010081: AWJ20_299
subclass of: SO_0000673
so part of: AWJ20_299
location: complement(937234..937743)
location: region:937234-937743:-1
so has part: feature:937234-937743:-1:exon

XP_018734541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:937234-937743:-1:exon

AWJ20_300
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RPA49
locus tag: AWJ20_300
so part of: sequence
location: <938459..>939697
location: region:938459-939697:1
so has part: feature:938459-939697:1:exon
subclass of: SO_0000010

30034974
type: Gene
SIO_000068: ncbigene

position:938459:1
position: 938459
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:939697:1
position: 939697
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938459-939697:1:exon

AWJ20_300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RPA49
locus tag: AWJ20_300
product: DNA-directed RNA polymerase I subunit RPA49
transcript id: XM_018879987.1
SIO_010081: AWJ20_300
subclass of: SO_0000673
so part of: AWJ20_300
location: <938459..>939697
location: region:938459-939697:1
so has part: feature:938459-939697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938459-939697:1:exon

AWJ20_300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RPA49
locus tag: AWJ20_300
inference: similar to AA sequence:KEGG_Orthology:K03005
note: RNA polymerase I subunit A49; essential for nucleolar assembly and for high polymerase loading rate; required for nucleolar localization of Rpa34p; GO_component: GO:0005736 - DNA-directed RNA polymerase I complex [Evidence IDA] [PMID 11486042]; GO_component: GO:0005736 - DNA-directed RNA polymerase I complex [Evidence IMP] [PMID 1409638]; GO_component: GO:0005736 - DNA-directed RNA polymerase I complex [Evidence IDA] [PMID 9837969]; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 21263028]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA,IEA]; GO_function: GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA,IEA]; GO_function: GO:0001054 - RNA polymerase I activity [Evidence IDA] [PMID 9837969]; GO_function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0008361 - regulation of cell size [Evidence IMP] [PMID 12089449]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]; GO_process: GO:0006362 - transcription elongation from RNA polymerase I promoter [Evidence IDA] [PMID 18160037]; GO_process: GO:0006360 - transcription from RNA polymerase I promoter [Evidence IDA] [PMID 9837969]; GO_process: GO:0042790 - transcription of nuclear large rRNA transcript from RNA polymerase I promoter [Evidence IMP] [PMID 12374750]; GO_process: GO:0042790 - transcription of nuclear large rRNA transcript from RNA polymerase I promoter [Evidence IGI] [PMID 9121426]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: DNA-directed RNA polymerase I subunit RPA49
translation: MASTKATEVVKLQTKLLIDDERESSAILGQFPGINVSETASFELYKSKSGKALVHGQSDKLEYDGVSEGKDGNKYCVAVYDPQTKSLQLVPTPLVALSTIVKSKKRVRGPDIKQSNVRNSIQRTALGEAFGTKKAKKAITDLERNKIDADLLQDLETAIVDTVKTSTENLPSHEKIQEALSSERPIPPYNLEATDTSLIYPLIDGVFSKQEYDAMKVASIILKEKDDAKRIAMFPQKTSTYIHTRVQNTILSEISSVDKIHKIKLLYYASLLIAVYENRRISSKTALLAKLGNPPEILVQGVINKFTVSKAGRFGRSKDMSFAIDPACENKLLCYFLVLALHLDNFSVEIPPLVHELSLKPSKLADLFKALGCNIKVVGASKSNNNAGLKIAVLKAPLRLPEVAKRKRAGGR
SIO_010081: AWJ20_300
subclass of: SO_0000673
so part of: AWJ20_300
location: 938459..939697
location: region:938459-939697:1
so has part: feature:938459-939697:1:exon

XP_018734542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:938459-939697:1:exon

AWJ20_301
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MAL11
locus tag: AWJ20_301
so part of: sequence
location: complement(<940054..>941709)
location: region:940054-941709:-1
so has part: feature:940054-941709:-1:exon
subclass of: SO_0000010

30034985
type: Gene
SIO_000068: ncbigene

position:940054:-1
position: 940054
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:941709:-1
position: 941709
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940054-941709:-1:exon

AWJ20_301
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MAL11
locus tag: AWJ20_301
product: Mal11p
transcript id: XM_018879998.1
SIO_010081: AWJ20_301
subclass of: SO_0000673
so part of: AWJ20_301
location: complement(<940054..>941709)
location: region:940054-941709:-1
so has part: feature:940054-941709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:940054-941709:-1:exon

AWJ20_301
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MAL11
locus tag: AWJ20_301
note: High-affinity maltose transporter (alpha-glucoside transporter); inducible; encoded in the MAL1 complex locus; broad substrate specificity that includes maltotriose; required for isomaltose utilization; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence ISS] [PMID 16741702]; GO_component: GO:0005886 - plasma membrane [Evidence ISS] [PMID 8594329]; GO_function: GO:0005352 - alpha-glucoside:proton symporter activity [Evidence IDA] [PMID 12702465]; GO_function: GO:0005364 - maltose:proton symporter activity [Evidence IMP] [PMID 1999393]; GO_function: GO:0005364 - maltose:proton symporter activity [Evidence IMP] [PMID 8594329]; GO_function: GO:0022891 - substrate-specific transmembrane transporter activity [Evidence IEA]; GO_function: GO:0015293 - symporter activity [Evidence IEA]; GO_function: GO:0022857 - transmembrane transporter activity [Evidence IEA]; GO_function: GO:0015574 - trehalose transmembrane transporter activity [Evidence IDA] [PMID 12702465]; GO_process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO_process: GO:0046352 - disaccharide catabolic process [Evidence IMP] [PMID 20562106]; GO_process: GO:0000023 - maltose metabolic process [Evidence IEA]; GO_process: GO:0015768 - maltose transport [Evidence IGI] [PMID 6371820]; GO_process: GO:0015768 - maltose transport [Evidence IMP] [PMID 8594329]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0015771 - trehalose transport [Evidence IDA] [PMID 12702465]
codon start: 1
product: Mal11p
translation: MSKEGEFQDEVEVPGVTATEAEINARAAQMAAHKDGYRAAFKRYPKIFFWIGVMLWMLILMGFDNSAGGQVLSIPKFRENFGGGLFVDGNFLLSASWQSAIQAGPTAMNVVGLYVGSYTADHLGKRIVLFAAICISFAAIGVEYSCKTIETFFAGKMVNGFALGIMSALCVSYVAEISPLSIRGIATGCCNLSQTIGPFIGSILGNYVGTKNNDWSYKSLFVAQWLFGGIAILVQPWMPESPAFYLKKGKEDKARKQLRRLCSNEEDAEDQLNVLKITLYEAEQLYNGGSYIQCFKGTNLRRTLLAGLVFFTHPMSGVSFNSSYGPFIYQLIGISAQESFRIGIGAQVLSMGGTIASFFIIDRFGRRPLILCGLTALMINLLCTGITGTQSQHSAAARTACVAFLTMFNFWYNGGIGAIAYAIASEIPTSVLRTKTVAIALSVNQGFGTMWTFVLPFIINPNEGNLGPKVGFIFFALSMINLVLLYLFLPEIAHRTFEELDELFANHVPAREFKKYITAAEVKAEQAFNQKGIADGTINEKQQDIEMVEHA
SIO_010081: AWJ20_301
subclass of: SO_0000673
so part of: AWJ20_301
location: complement(940054..941709)
location: region:940054-941709:-1
so has part: feature:940054-941709:-1:exon

XP_018734543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:940054-941709:-1:exon

AWJ20_302
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_302
so part of: sequence
location: <942926..>944233
location: region:942926-944233:1
so has part: feature:942926-944233:1:exon
subclass of: SO_0000010

30034996
type: Gene
SIO_000068: ncbigene

position:942926:1
position: 942926
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:944233:1
position: 944233
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942926-944233:1:exon

AWJ20_302
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_302
product: hypothetical protein
transcript id: XM_018880009.1
SIO_010081: AWJ20_302
subclass of: SO_0000673
so part of: AWJ20_302
location: <942926..>944233
location: region:942926-944233:1
so has part: feature:942926-944233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:942926-944233:1:exon

AWJ20_302
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_302
codon start: 1
product: hypothetical protein
translation: MPSQNKTRYALIGTGGRAMFFYVSLVRDYSQTSELVAFCDTNQTRMNYANKKVEELGGKAVPTYLAHDFEKMIAEVKPDHLIVTTMDRTHHKYIIRAMELGVDVISEKPMTVDEVKCQEILDAVERTGRKLRVTFNYRYAPHNTKIRELIADDTIGQVNAVHFEWFLNTKHGADYFRRWHRNKNNSGGLLVHKSTHHFDLVNFWMNTNPVTAFAFGDLRFYGKENAEKRGVTQFYSRAHGSKVAKDDPFALHLEENEQLKEMYLDAEHEDDYFRDQSVFGDGISIEDTMAATVKYANGAVLSYALHAYSPLEGFRVVFNGSKGRIELNVIECSYVNSGGEQAKEGAIEKLEITVYPMFGKSYNVDIDFKEGGHGGGDPVLLNDIFGVPVPDRFNRAASHVDGALSILTGIACNKSIRTGLPVQVMDLVDFRGARK
SIO_010081: AWJ20_302
subclass of: SO_0000673
so part of: AWJ20_302
location: 942926..944233
location: region:942926-944233:1
so has part: feature:942926-944233:1:exon

XP_018734544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:942926-944233:1:exon

AWJ20_303
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_303
so part of: sequence
location: complement(<944475..>946499)
location: region:944475-946499:-1
so has part: feature:944475-946499:-1:exon
subclass of: SO_0000010

30035007
type: Gene
SIO_000068: ncbigene

position:944475:-1
position: 944475
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:946499:-1
position: 946499
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944475-946499:-1:exon

AWJ20_303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_303
product: hypothetical protein
transcript id: XM_018880020.1
SIO_010081: AWJ20_303
subclass of: SO_0000673
so part of: AWJ20_303
location: complement(<944475..>946499)
location: region:944475-946499:-1
so has part: feature:944475-946499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944475-946499:-1:exon

AWJ20_303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_303
codon start: 1
product: hypothetical protein
translation: MAIDRLSLVRRHNPTRTSSNPISPLQVGNGHLAFGADITGLQTFVPFSIMSDWGYKSDPLPSEKLSDFTGQTWSTHGRDVKYLMPNEQKELSQWLISNPNRMNLGRIGLYFGEATVSESDLRDCHQELDLWTGSVRSSFEYKGEKVQIQTICDPENDTVSFSIQSTLIEKKKLSIFLDFPYNCGKSKFQAPYVGDWDNPSAHTTKVSESSASNVSLVRDIDGTKYFVTANWNSSGKLVRLKDHRFALELDEGSSVLEVGVTFSESNAKNEWSFQSSLAKAESHWESFWKEGGAIDLSRSKDPRWKELERRFVVGQYAMAINATGKEPPQESGLVNTGWYGKFHTEMVWWHLGYLALLNKWSVLRRPLSVYDKLLPEALKLASSQGYKGARWPKMVDPSGRPSPGEINALLIWQNPHVMLFAELDYRAHPTSETLEKWKKAVFETAEFLEDYAHWNPETQTYDLGSPVHVVSENTDARETYNPSLELQYWRFGLSVAQQWRKRLGIAPNEQWERVLTNLATPHIEDGLYVIWPGIKDMWTKYTWEHPALVGMYGWLPSNDALDINTMKATSKKIWETWHFDECWGWDFGMLAMNAARLGEPEKAIDFLLDPNMPFDDAGLAPGGTQVPFPYLPATGSLLLAVAFMAAGWDDDNGKPSPGFPTGWEVSCEGLHKAI
SIO_010081: AWJ20_303
subclass of: SO_0000673
so part of: AWJ20_303
location: complement(944475..946499)
location: region:944475-946499:-1
so has part: feature:944475-946499:-1:exon

XP_018734545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:944475-946499:-1:exon

AWJ20_304
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_304
so part of: sequence
location: <947045..>948394
location: region:947045-948394:1
so has part: feature:947045-948394:1:exon
subclass of: SO_0000010

30035018
type: Gene
SIO_000068: ncbigene

position:947045:1
position: 947045
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:948394:1
position: 948394
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947045-948394:1:exon

AWJ20_304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_304
product: hypothetical protein
transcript id: XM_018880031.1
SIO_010081: AWJ20_304
subclass of: SO_0000673
so part of: AWJ20_304
location: <947045..>948394
location: region:947045-948394:1
so has part: feature:947045-948394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947045-948394:1:exon

AWJ20_304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_304
inference: similar to AA sequence:KEGG_Orthology:K12661
codon start: 1
product: hypothetical protein
translation: MVDDTKSVRRFPRIKEIRTFIPSGPGMGDYHDVERGHWLIDDKFSTPMSKYPDYRKSRVDWGINVLGSFFVEIEADDGTVGFATGFGGPPACWLVKNHFERFLIGADPRNTNKLWDQMFKSSMYYGRKGLPVAVISVIDLALWDLLGKIRNEPVYQMIGGCVLDKLKFYCTGCDPAAAKELGFWGGKVPLPYGPDEGHEGLKLNVEFLRKHREAVGPDFPLMVDCWMSLNVPYLIDLVNATRDLNINWWEETLHPDDYDGYAQLKRALPFIKLTTGEHEYTKYGFRKLIEGRNVDILQPDVMWVGGLTELLRVNAQAQAYDIPVVPHASGPYSYHFMFSQPNTPFQEYLASSPDSKTILPVFGNLFVNEPMPHGGYMDISALDKPGFGLELNPAANLIPADFILTPAPAKPLSNGTNGHVQKSITNGKSAELAHIELNGNAAVINGHAK
SIO_010081: AWJ20_304
subclass of: SO_0000673
so part of: AWJ20_304
location: 947045..948394
location: region:947045-948394:1
so has part: feature:947045-948394:1:exon

XP_018734546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947045-948394:1:exon

AWJ20_305
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_305
so part of: sequence
location: <948662..>949303
location: region:948662-949303:1
so has part: feature:948662-949303:1:exon
subclass of: SO_0000010

30035029
type: Gene
SIO_000068: ncbigene

position:948662:1
position: 948662
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:949303:1
position: 949303
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948662-949303:1:exon

AWJ20_305
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_305
product: hypothetical protein
transcript id: XM_018880042.1
SIO_010081: AWJ20_305
subclass of: SO_0000673
so part of: AWJ20_305
location: <948662..>949303
location: region:948662-949303:1
so has part: feature:948662-949303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:948662-949303:1:exon

AWJ20_305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_305
inference: similar to AA sequence:KEGG_Orthology:K18338
codon start: 1
product: hypothetical protein
translation: MTRRTRRVIDSHVHLFDRSHLDKLAWMTADSPLNEGNDLVRYGEECHDKKPRNLNYSITGLIFIEADRKVLKPIDDPSGWDFVLDEYKYVDRIRRNELLSSENSAPLPSIPVKAVIPWAPVPSGRKVLEKYISELKKAGAQSSTSVKGFRYLVQDKPNGVMLEEGFIEGVNYLGEEGYIFELGIDIRSGGLWQLEEAISLVKKIPNTVIIIGE
SIO_010081: AWJ20_305
subclass of: SO_0000673
so part of: AWJ20_305
location: 948662..949303
location: region:948662-949303:1
so has part: feature:948662-949303:1:exon

XP_018734547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:948662-949303:1:exon

AWJ20_306
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_306
so part of: sequence
location: complement(<949782..>952166)
location: region:949782-952166:-1
so has part: feature:949782-952166:-1:exon
subclass of: SO_0000010

30035040
type: Gene
SIO_000068: ncbigene

position:949782:-1
position: 949782
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:952166:-1
position: 952166
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949782-952166:-1:exon

AWJ20_306
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_306
product: hypothetical protein
transcript id: XM_018880053.1
SIO_010081: AWJ20_306
subclass of: SO_0000673
so part of: AWJ20_306
location: complement(<949782..>952166)
location: region:949782-952166:-1
so has part: feature:949782-952166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949782-952166:-1:exon

AWJ20_306
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_306
codon start: 1
product: hypothetical protein
translation: MSERLSKVEADLSKLNQLELHSSTQPDRLNKLESEISSQSSAIMELSRELDYLRHQLMSQSPMSPRNHIRSSPNSNLMGHNAMSIGNPAVSKSSPGTGAGEIVRRASATISNSNGNANSASSLHPQGNNTVSRPAAGSLSNSVAGELSLIEGVSDSSGSRSASSLSDIKVTLLPPKALLRELVDLFFQRIHPCYPFLHPVKASGALHDIISQNLTDSPNPHSTPLSDKRKEYPLVLYSIVVVTLRFVPQFKLNDRDKERYYRSCKETVMLRSFAITDLDCLQALVILAIDLVGISNGPETWSIIPLICSAATHLGLSREPALFLSNSDVASDSNNESISAQSADILPAAENWQDLESRRRLFWVIYSLDRFSSVATAFSFKINSLEIDRLLPVRADLWTDDSLLHSHVDTRTRWLKTIIRKDYSINFPSNIDTFGYMVENLQILSSIHVFLKKPISIYSLQDVLDWQVQFRQLDIELDNWYKSLPPHLSSEVINDDLKDQLDPMVLMLQATYQTTVIRLNSAAGYSCLKSEFFTNSPSAAKRCLLAVSNVVALAKHVIIFGLGKYVGPHYAWALWVSARLLVVDCVTNYKSFPEDLEILLTGLKKLGRVWKVAARYYGLLTMVIDEELSLRSTARGSNALSRGDDDSPIDSMTGEHKRNGSSAQIMSDMRRNAYALDFLLSKQKKEQKKEKPTSGEGPVLKSSPANDNESIKSDEMDQESIISSFELSELMDGSNMNDIFDWFNWPRQSGKMGQKTPVQHSVGEYKNILSREEQIGLYQGESSNTNDRPDWMSM
SIO_010081: AWJ20_306
subclass of: SO_0000673
so part of: AWJ20_306
location: complement(949782..952166)
location: region:949782-952166:-1
so has part: feature:949782-952166:-1:exon

XP_018734548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:949782-952166:-1:exon

AWJ20_307
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SES1
locus tag: AWJ20_307
so part of: sequence
location: complement(<952947..>954305)
location: region:952947-954305:-1
so has part: feature:952947-954305:-1:exon
subclass of: SO_0000010

30035051
type: Gene
SIO_000068: ncbigene

position:952947:-1
position: 952947
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:954305:-1
position: 954305
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:952947-954305:-1:exon

AWJ20_307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SES1
locus tag: AWJ20_307
product: serine--tRNA ligase SES1
transcript id: XM_018880063.1
SIO_010081: AWJ20_307
subclass of: SO_0000673
so part of: AWJ20_307
location: complement(<952947..>954305)
location: region:952947-954305:-1
so has part: feature:952947-954305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952947-954305:-1:exon

AWJ20_307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SES1
locus tag: AWJ20_307
inference: similar to AA sequence:KEGG_Orthology:K01875
note: Cytosolic seryl-tRNA synthetase; class II aminoacyl-tRNA synthetase that aminoacylates tRNA(Ser), displays tRNA-dependent amino acid recognition which enhances discrimination of the serine substrate, interacts with peroxin Pex21p; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA,IEA]; GO_function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0004828 - serine-tRNA ligase activity [Evidence IDA] [PMID 3031581]; GO_process: GO:0097056 - selenocysteinyl-tRNA(Sec) biosynthetic process [Evidence IEA]; GO_process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]; GO_process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IDA] [PMID 3031581]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]
codon start: 1
product: serine--tRNA ligase SES1
translation: MLDIIQFLEEKGGNPEEIRKSQLARGDPVEIVDEIIADYKEWTKIRFRVDELNKEQNKLQKAIGLKFKAKEDASELVKEKDAIVAKKQSLIAEEEEADKALRAKVNLVGNIVHPSVPVSQDEANNELIRTWAPEGVVVDASVKAKLSHHEVLLRLDGYDPDRGVKVSGHRGYFLRGNGLFLNQALINYGLDFLAKREYTPLQAPVMMNKDVMAKTAQLSQFDEELYKIIDGTDEKYLIATSEQPISAYHSGEWFEQPSEQLPKRYAGYSNCFRREAGSHGKDAWGIFRIHQFDKIEQFCLTEPEKSWEEFERMAGAAEDFYKSLNIPYRLVAIVSGELNNAAAKKYDLEAWFPFQSEYKELVSCSNCTDYQSRNLEIRCGIKKLNDREKKYVHCLNSTLCATQRALCCVLENYQTDDGLRVPEVLRKFIPGEPEFLPYVKDLPKDSTSNKRK
SIO_010081: AWJ20_307
subclass of: SO_0000673
so part of: AWJ20_307
location: complement(952947..954305)
location: region:952947-954305:-1
so has part: feature:952947-954305:-1:exon

XP_018734549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:952947-954305:-1:exon

AWJ20_308
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ESL1
locus tag: AWJ20_308
so part of: sequence
location: <957317..>960346
location: region:957317-960346:1
so has part: feature:957317-960346:1:exon
subclass of: SO_0000010

30035062
type: Gene
SIO_000068: ncbigene

position:957317:1
position: 957317
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:960346:1
position: 960346
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957317-960346:1:exon

AWJ20_308
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ESL1
locus tag: AWJ20_308
product: Esl1p
transcript id: XM_018880074.1
SIO_010081: AWJ20_308
subclass of: SO_0000673
so part of: AWJ20_308
location: <957317..>960346
location: region:957317-960346:1
so has part: feature:957317-960346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957317-960346:1:exon

AWJ20_308
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ESL1
locus tag: AWJ20_308
note: hypothetical protein; predicted to contain a PINc domain; ESL1 has a paralog, ESL2, that arose from the whole genome duplication; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Esl1p
translation: MDPGAGESPLRIGSTRRARGSNPDPDFDRGPISNNEKNLRLFNARISGRSRGFVGSGSATSSGAGGLESSPNPTTYGVAGSIAGDGSPYHKDRVGTESDSRQYQDQNQQNQQNNQQHQQHHMQMLHQQQAQLQQQQQQQQQYQQQHQQQHQLLLQQQQQQQQQQQQQGQGQGQGQQSQQQQKSGGAGTEPARTNTAGGGGMENAAVGSGAGSSTRETSSRGGQQQNMPPQQQHYHQSQPPSSSSRHHVQTAYELGVNLPTVEKLIGEIQSAYFDISRLEVKCLMLSKQIEDNQHIIQQSNLTGSNGNYGDNPTSSRLRNLGIDLSNPSSTGSFDSSKIPPEYWAESYFLELYQNQANLIDKYFDFMFLAYHPCGNSVTRGLVKKYKIPIRMWNKGIFKFLDILRAHMPKSQDLITKFIYHCFSLLTMLVDPPYESRYMWLEALGDLARFSMALGNISHGEWRGVSQYWYSRAANRSPGVGRLFHHCAVVCIYRLDSLFYFCKSLTTTQQFEPSRETILSLFESNQEGEANTPIALFIKLHQVNFTQTNISDFPKILSDVTSSIMARDRDYNDLDLKNRGAILAYCNITSLLGYGSLKNPASAFFYELAKERSGAGAALGAASSTTNTANTANTANTTNTTGNTTGSTTGSTTGSNASGNNGSGNNNTAGSGNHSTSANSSSNPTTSSVTASAGSLFMAQQISFEMLKQFLTLPRHIALLHVIVWLHFFNALTDNPDVCHHLLLSDFFPASKLVRFLNEGLKTVDLILKDTNTSKQHWTSTTSNSTSNTASGNATNKSNSVGSFHSIHGSAASGSVSGSGAAPPVGTSSGTSGSNKSDNTFSPPGSPSLQCQQCTESESLIDRIASWKKSYNSRSPAAEDSIELISSKLPNPEERGHFPMLRERPLPEELLLLGFVWSYKTAKTELYNEYESSTTDEPFPGPPGKEVLRPIREVRAIELALSLADSNSWLAYHNGYFELQGPLRVHSEDHMSDSEYVPSPMTTANTGVLD
SIO_010081: AWJ20_308
subclass of: SO_0000673
so part of: AWJ20_308
location: 957317..960346
location: region:957317-960346:1
so has part: feature:957317-960346:1:exon

XP_018734550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:957317-960346:1:exon

AWJ20_309
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_309
so part of: sequence
location: <961559..>962311
location: region:961559-962311:1
so has part: feature:961559-962311:1:exon
subclass of: SO_0000010

30035073
type: Gene
SIO_000068: ncbigene

position:961559:1
position: 961559
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:962311:1
position: 962311
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961559-962311:1:exon

AWJ20_309
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_309
product: hypothetical protein
transcript id: XM_018880085.1
SIO_010081: AWJ20_309
subclass of: SO_0000673
so part of: AWJ20_309
location: <961559..>962311
location: region:961559-962311:1
so has part: feature:961559-962311:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961559-962311:1:exon

AWJ20_309
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_309
codon start: 1
product: hypothetical protein
translation: MIERSALPSSAATSVSSSSASSLLPKHLAHHKPGQIPEVTTSGSGAGAGAGAASGSGSGATGEAKKRVIRPKASPSAAVNPRPYANMLYEVNPAVHGFFGNIKDMYVVRGPRAFVQGFMPTIFRQVMNSTVRFTTFNFLKQFFHPHDNEPMPGLMAFGIGCVAGAVEVLATQPIDVVKTRMQTVNGIKLYGSSLMCSYKIFVHEGPKHLWAGMLPRFVKVTFSGGIVFGVYEFANSLVMRAMQENPFSWE
SIO_010081: AWJ20_309
subclass of: SO_0000673
so part of: AWJ20_309
location: 961559..962311
location: region:961559-962311:1
so has part: feature:961559-962311:1:exon

XP_018734551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:961559-962311:1:exon

AWJ20_310
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ADE5,7
locus tag: AWJ20_310
so part of: sequence
location: <963887..>966256
location: region:963887-966256:1
so has part: feature:963887-966256:1:exon
subclass of: SO_0000010

30035085
type: Gene
SIO_000068: ncbigene

position:963887:1
position: 963887
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:966256:1
position: 966256
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963887-966256:1:exon

AWJ20_310
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ADE5,7
locus tag: AWJ20_310
product: bifunctional aminoimidazole ribotide synthase/glycinamide ribotide synthase
transcript id: XM_018880096.1
SIO_010081: AWJ20_310
subclass of: SO_0000673
so part of: AWJ20_310
location: <963887..>966256
location: region:963887-966256:1
so has part: feature:963887-966256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963887-966256:1:exon

AWJ20_310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ADE5,7
locus tag: AWJ20_310
inference: similar to AA sequence:KEGG_Orthology:K11788
note: Enzyme of the 'de novo' purine nucleotide biosynthetic pathway; contains aminoimidazole ribotide synthetase and glycinamide ribotide synthetase activities; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA,IEA]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA,IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA,IEA]; GO_function: GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence ISS] [PMID 3097325]; GO_function: GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA,IEA]; GO_function: GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence ISS] [PMID 3097325]; GO_process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0009113 - purine nucleobase biosynthetic process [Evidence IEA]; GO_process: GO:0006144 - purine nucleobase metabolic process [Evidence TAS] [PMID 9148957]; GO_process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
codon start: 1
product: bifunctional aminoimidazole ribotide synthase/glycinamide ribotide synthase
translation: MASLNILLIGNGGREHALAWKLNQSKLVNKIYVAPGNGGTGNGQLSKVENIAIGSSKQDFEKLVEFAVKNDVNLVVPGPEQPLVEGIEGYFRKVGIPVFGPSEKAARMEGSKTFSKDFMAKHKIPTAEFENFTDFDKAKAYVESVNHNVVIKASGLAAGKGVLMPTTKEEAYKALEQVMKDKEFGDAGDEVVVEECLEGDELSILAFSDGYTVIDLPAAQDHKRIGEADTGLNTGGMGAYSPTPIATPELIDEIRETILKPTVTGMRRDGIPFVGMLFTGIMLTKTGPKVLEYNVRFGDPETQTVLPLLSEDTDLAEVFLACAEHRLDSVTLKVNPGFATTVVLSAGGYPSSYEKGDEITVGEVAKDTFVFHAGTSTKDGKIVTSGGRVIASSAVAPTLKEAVQKAYEGVEKIQFKNRYFRRDIAHRAFRDASKSSAANSTSITYEQAGVSVDQGNKFVEEIKAKVKSTRRPGADADIGGFGGLFDLKATGFRDPLLVGATDGVGTKLKIAQTLGIHDTVGIDLVGMNVNDLVVQGAEPLIFLDYFASGKLNIETAAAFVSGVAEGCIQAGCALVGGETAEMPGLYHGDDYDVNGTSIGAVERDAILPRLDDLAVGDVVLGIASHGPHSNGFSLIRKILEVSKLQYTDKAPWDPSTTVGKSLLTPTRIYVKSLLPIIKQKKIIALAHITGGGLVENVPRVLPKHLNAEIDGSSWEIPAVFQWLGKAGNVPVSDISKTLNMGIGMVVIVKKEDAASVLSQLNEAGEKAYSIGSIVSGEQKCVLKNTSNWY
SIO_010081: AWJ20_310
subclass of: SO_0000673
so part of: AWJ20_310
location: 963887..966256
location: region:963887-966256:1
so has part: feature:963887-966256:1:exon

XP_018734552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:963887-966256:1:exon

AWJ20_311
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DHH1
locus tag: AWJ20_311
so part of: sequence
location: complement(<969152..>970762)
location: region:969152-970762:-1
so has part: feature:969152-970762:-1:exon
subclass of: SO_0000010

30035096
type: Gene
SIO_000068: ncbigene

position:969152:-1
position: 969152
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:970762:-1
position: 970762
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969152-970762:-1:exon

AWJ20_311
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DHH1
locus tag: AWJ20_311
product: DExD/H-box ATP-dependent RNA helicase DHH1
transcript id: XM_018880107.1
SIO_010081: AWJ20_311
subclass of: SO_0000673
so part of: AWJ20_311
location: complement(<969152..>970762)
location: region:969152-970762:-1
so has part: feature:969152-970762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:969152-970762:-1:exon

AWJ20_311
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DHH1
locus tag: AWJ20_311
inference: similar to AA sequence:KEGG_Orthology:K12614
note: Cytoplasmic DExD/H-box helicase, stimulates mRNA decapping; coordinates distinct steps in mRNA function and decay, interacts with both the decapping and deadenylase complexes, role in translational repression, mRNA decay, and processing body dynamics; may have a role in mRNA export; C-terminus of Dhh1p interacts with Ngr1p and promotes POR1, but not EDC1 mRNA decay; forms cytoplasmic foci upon DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 12032091]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0000932 - cytoplasmic mRNA processing body [Evidence IEA]; GO_component: GO:0000932 - cytoplasmic mRNA processing body [Evidence IDA] [PMID 12730603]; GO_component: GO:0000932 - cytoplasmic mRNA processing body [Evidence IDA] [PMID 18611963]; GO_component: GO:0010494 - cytoplasmic stress granule [Evidence IDA] [PMID 20368989]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004004 - ATP-dependent RNA helicase activity [Evidence ISS] [PMID 12930949]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003682 - chromatin binding [Evidence IDA] [PMID 23706738]; GO_function: GO:0004386 - helicase activity [Evidence IEA,IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA,IDA] [PMID 23222640]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IPI] [PMID 11780629]; GO_function: GO:0090079 - translation regulator activity, nucleic acid binding [Evidence IGI,IMP] [PMID 22719226]; GO_process: GO:0006200 - ATP catabolic process [Evidence IEA]; GO_process: GO:0033962 - cytoplasmic mRNA processing body assembly [Evidence IMP] [PMID 18182159]; GO_process:…
codon start: 1
product: DExD/H-box ATP-dependent RNA helicase DHH1
translation: MSDAWKSQLNIPEKDHRPQTEDVTATKGNGFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPIALAGRDILARAKNGTGKTAAFTIPALQQVNPKLGKIQALILVPTRELALQTSQVCRTLGKHLGINVMVTTGGTTLKDDIIRLNESVHVLVGTPGRVLDLAGKNVVDFSECPMFIMDEADKLLSPDFTPIIEQLLAHFPPDRQILLFSATFPLLVKSFMDKHLNKPYEINLMDELTLRGITQYYAFVEEKQKLHCLNTLFSKLSINQSIIFCNSTNRVELLARKITELGYSCYYSHAKMIQAHRNRVFHEFRNGTCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYQIEQELGTEIKPIPSHIDRSLYVAQNTDAIPKPFPLKELPKSNQRSHEKYQQQTDLNFQPRPQHHNQHHHHQQQQGQQHLQQNQNQNPNQIPTQNQHPSQAFSGQPQPPQGVPPQGYPQFPQGYPPQPGYPPQGFPQQPPVPPNGQFYAQPPPALPQ
SIO_010081: AWJ20_311
subclass of: SO_0000673
so part of: AWJ20_311
location: complement(969152..970762)
location: region:969152-970762:-1
so has part: feature:969152-970762:-1:exon

XP_018734553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:969152-970762:-1:exon

AWJ20_312
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: STE7
locus tag: AWJ20_312
so part of: sequence
location: <972230..>974227
location: region:972230-974227:1
so has part: feature:972230-974227:1:exon
subclass of: SO_0000010

30035107
type: Gene
SIO_000068: ncbigene

position:972230:1
position: 972230
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:974227:1
position: 974227
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972230-974227:1:exon

AWJ20_312
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: STE7
locus tag: AWJ20_312
product: mitogen-activated protein kinase kinase STE7
transcript id: XM_018880118.1
SIO_010081: AWJ20_312
subclass of: SO_0000673
so part of: AWJ20_312
location: <972230..>974227
location: region:972230-974227:1
so has part: feature:972230-974227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:972230-974227:1:exon

AWJ20_312
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: STE7
locus tag: AWJ20_312
inference: similar to AA sequence:KEGG_Orthology:K11226
codon start: 1
product: mitogen-activated protein kinase kinase STE7
translation: MSGSAEFTRQKLSLGDDSDTSSRASIQVGIGNGSSIVNNGLGSGSGSGSNTLDTDLGAGTVPAAVTTAAGATATTAVSAIADIVSTAPAAADSRPVTDNFASPIDTASSVFGAGISTGVGSVGGIAIALPDSQDSVHSPVRSTISSASSSPLTANTADTATASPNSSFNSVNSSSVDDVPRILPVKTLKRKNFKALSLPVSSPGSGNINTNGLGNGLGNGVGNGNGNGNGTSNDFMSAGSNGGHVPSLLAPSTAASARQSTQRVAPVPLGSINGNNNSNNNNGNPNNSNSSINNNSNSINNFNNNSNNSNSNDNINSNISSNSSNNGSNGSYDTSYGASGPVDSSINNYSSNSIGVSTYTGGGNIVTQLASLELGVEFKLDLREEDFENITDLGHGNGGTVSKVVHVPTKTVMAKKVIHLETKPAVRKQIARELHIMHECESDYIVGYYGGFVTESSVIICMEYMDCGSLDRISKLKGSINEGIISKITYAVVQGLTYLYDEHRIVHRDVKPSNVLVNSRGQVKLCDFGVSGELINSLAETFVGTSTYMSPERIQGAAYSVKGDVWSLGLTVLELAIGKFPFSSNNGGNPGSILDLLQRIVNEDPPALPDNGQFSPQFRKFVDKCLYKEPQRPTPHELLDHDAFILTAKHSAISVENWACDLCID
SIO_010081: AWJ20_312
subclass of: SO_0000673
so part of: AWJ20_312
location: 972230..974227
location: region:972230-974227:1
so has part: feature:972230-974227:1:exon

XP_018734554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972230-974227:1:exon

AWJ20_313
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_313
so part of: sequence
location: complement(<974469..>974762)
location: region:974469-974762:-1
so has part: feature:974469-974762:-1:exon
subclass of: SO_0000010

30035118
type: Gene
SIO_000068: ncbigene

position:974469:-1
position: 974469
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:974762:-1
position: 974762
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974469-974762:-1:exon

AWJ20_313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_313
product: hypothetical protein
transcript id: XM_018880129.1
SIO_010081: AWJ20_313
subclass of: SO_0000673
so part of: AWJ20_313
location: complement(<974469..>974762)
location: region:974469-974762:-1
so has part: feature:974469-974762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974469-974762:-1:exon

AWJ20_313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_313
codon start: 1
product: hypothetical protein
translation: MSNILDVFNPKTPPNGQQPQEPCFPCLLTSAAVMIAGGGYMASGAVFMAKEGQPLPQAATPAWRATVRLGGVGVLALGLYRAYDTLMLSKEADSKLH
SIO_010081: AWJ20_313
subclass of: SO_0000673
so part of: AWJ20_313
location: complement(974469..974762)
location: region:974469-974762:-1
so has part: feature:974469-974762:-1:exon

XP_018734555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:974469-974762:-1:exon

AWJ20_314
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CMR1
locus tag: AWJ20_314
so part of: sequence
location: <987840..>989351
location: region:987840-989351:1
so has part: feature:987840-989351:1:exon
subclass of: SO_0000010

30035129
type: Gene
SIO_000068: ncbigene

position:987840:1
position: 987840
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:989351:1
position: 989351
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987840-989351:1:exon

AWJ20_314
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CMR1
locus tag: AWJ20_314
product: Cmr1p
transcript id: XM_018880140.1
SIO_010081: AWJ20_314
subclass of: SO_0000673
so part of: AWJ20_314
location: <987840..>989351
location: region:987840-989351:1
so has part: feature:987840-989351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:987840-989351:1:exon

AWJ20_314
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CMR1
locus tag: AWJ20_314
note: DNA-binding protein with preference for UV-damaged DNA; protein sequence contains three WD domains (WD-40 repeat); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; potential regulatory target of Mbp1p, which binds to the promoter region; co-localizes with Hos2p in nuclear foci in response to DNA damage by MMS; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22367945]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0000790 - nuclear chromatin [Evidence IDA] [PMID 22367945]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_function: GO:0003677 - DNA binding [Evidence IDA] [PMID 22367945]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Cmr1p
translation: MFSDVRQKSAKTARSSSNSSSRTRRAPRVKQEVDLGPRRKSRRLEGKKAEFDIERETAERLLVIEKQAAQEDKARKEGELKLADVIKNGEWDQALGLLSSLGKVSQGDYFEKIKKEEEQEENDGGTRDSDNSGLSSGKKKELVSARKELSNLSLHTKISPNDIKVTSERIFSVAFHPSETKRIVLAGDKMGELGLWDIDSTNKIKDEGDYEYETPNILSFKVHTRAIATILMPQFAPDKAYTASYDGSVRCLDLGSGTSTEAFVYDSDPRNPVGVSDCAMPDANTLYYTTLEGEFGIHDLRENQRKPKSQLLRLHDKKIGGFSFNPNAIHQIATGSLDRTLKVWDLRATSVIAESEDNEKAPHMYGEYQSRLSISATDWNSAGQIVCNGYDDTINVFDLSTSKSWTKSETHDIVPSVRLKHNCQTGRWVSILKSRWQPRPADSVQKFVIANMKRYLDIYSADGQQLAHLGHELMSAVPAVVQFHPSQNWLVGGSASGKLYLWE
SIO_010081: AWJ20_314
subclass of: SO_0000673
so part of: AWJ20_314
location: 987840..989351
location: region:987840-989351:1
so has part: feature:987840-989351:1:exon

XP_018734556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:987840-989351:1:exon

AWJ20_315
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_315
so part of: sequence
location: <991873..>993621
location: region:991873-993621:1
so has part: feature:991873-993621:1:exon
subclass of: SO_0000010

30035140
type: Gene
SIO_000068: ncbigene

position:991873:1
position: 991873
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:993621:1
position: 993621
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991873-993621:1:exon

AWJ20_315
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_315
product: hypothetical protein
transcript id: XM_018880151.1
SIO_010081: AWJ20_315
subclass of: SO_0000673
so part of: AWJ20_315
location: <991873..>993621
location: region:991873-993621:1
so has part: feature:991873-993621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:991873-993621:1:exon

AWJ20_315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_315
codon start: 1
product: hypothetical protein
translation: MPRVTLNRPQGIVLTACILLFVGYELFIIYNRNEVDPAWSKISSPFSKTPKTPQYVTEFKEQMDKGGYIPSLDSYDLYESVDVWRSPESFSHAYDDNPNSRHKSSMHFDNVHGRPKNPDPASYGSTGEYLKIPLVADYPPNADKIFLMIKTGASVLWDRLPVHLFTTLTRVPNFAIYSDAPGSVGGYEVIDVLANMTAKSRLRNEFKMYRDQRTLHDTHGNMPLTDVMGKDGWVLDKFKNIPMLAHAWTVSPDSDWYVFMDADSFYFIDNLVEVLSHFDPNQPLYMGSPAGAGRYTFAHGGSGVVLSHRTMQDTVGVDPIQVPKDYEDRTFKECCGDLMVAYMVVDRANTLITPNPSFKGEPYYSMELKESLWCKPPVSFHHLFPHDIEVLWEYERIKRLQGKQILFADMYRDFVMPYIDHQIEDWDNESWTTIVTLAKDRQNNILPSTEGGDEVRPYESLDACLKFCEGLPDCLMYSYHKKKQQCAVAPLVKLGKPAHDFQKSAIKDSNQGMVSGWMIERIQQMRNRTECDVAYKSSDAVYKTGIDRTEGWLRREDRTIITGKPYLDRDTDYASDTDAGIA
SIO_010081: AWJ20_315
subclass of: SO_0000673
so part of: AWJ20_315
location: 991873..993621
location: region:991873-993621:1
so has part: feature:991873-993621:1:exon

XP_018734557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991873-993621:1:exon

AWJ20_316
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PRC1
locus tag: AWJ20_316
so part of: sequence
location: complement(<993802..>994497)
location: region:993802-994497:-1
so has part: feature:993802-994497:-1:exon
subclass of: SO_0000010

30035151
type: Gene
SIO_000068: ncbigene

position:993802:-1
position: 993802
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:994497:-1
position: 994497
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:993802-994497:-1:exon

AWJ20_316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PRC1
locus tag: AWJ20_316
product: carboxypeptidase C PRC1
transcript id: XM_018880162.1
SIO_010081: AWJ20_316
subclass of: SO_0000673
so part of: AWJ20_316
location: complement(<993802..>994497)
location: region:993802-994497:-1
so has part: feature:993802-994497:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:993802-994497:-1:exon

AWJ20_316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PRC1
locus tag: AWJ20_316
inference: similar to AA sequence:KEGG_Orthology:K13289
note: Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; member of the serine carboxypeptidase family; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 11914276]; GO_component: GO:0000324 - fungal-type vacuole [Evidence IDA] [PMID 14562095]; GO_component: GO:0000324 - fungal-type vacuole [Evidence IDA] [PMID 23708375]; GO_component: GO:0005773 - vacuole [Evidence IEA,IEA,IEA]; GO_function: GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]; GO_function: GO:0004185 - serine-type carboxypeptidase activity [Evidence IDA,IMP] [PMID 8679540]; GO_process: GO:0046938 - phytochelatin biosynthetic process [Evidence IDA,IMP] [PMID 17408619]; GO_process: GO:0006508 - proteolysis [Evidence IEA,IEA]; GO_process: GO:0007039 - vacuolar protein catabolic process [Evidence TAS] [PMID 8789256]
codon start: 1
product: carboxypeptidase C PRC1
translation: MACGQGGYQAVLSNSVCSAMKSEIPSCLSSISQCYSSNSQLQCVQATNQCNEDEYEPLAETGLNVYDLRTQCQGELCYAGLNDVSTYLNQASVKQALGANPQITFQDCNDDINEAFSTAGDYIHSFAPDVAQILEANIPILIYAGDKDFICNWLGCRAWTRALEWPGQSEYNNASSVPWMSGQTHAGDVTNYQHFTFLRIYNAGHMVPHDQPQAALTMLNQWLQGDYSLQG
SIO_010081: AWJ20_316
subclass of: SO_0000673
so part of: AWJ20_316
location: complement(993802..994497)
location: region:993802-994497:-1
so has part: feature:993802-994497:-1:exon

XP_018734558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:993802-994497:-1:exon

AWJ20_317
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_317
so part of: sequence
location: complement(<994984..>995475)
location: region:994984-995475:-1
so has part: feature:994984-995475:-1:exon
subclass of: SO_0000010

30035162
type: Gene
SIO_000068: ncbigene

position:994984:-1
position: 994984
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:995475:-1
position: 995475
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994984-995475:-1:exon

AWJ20_317
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_317
product: carboxypeptidase C
transcript id: XM_018880173.1
SIO_010081: AWJ20_317
subclass of: SO_0000673
so part of: AWJ20_317
location: complement(<994984..>995475)
location: region:994984-995475:-1
so has part: feature:994984-995475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:994984-995475:-1:exon

AWJ20_317
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_317
note: Putative serine type carboxypeptidase; role in phytochelatin synthesis; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; expression induced by nitrogen limitation in a GLN3, GAT1-independent manner; GO_component: GO:0000324 - fungal-type vacuole [Evidence IDA] [PMID 14562095]; GO_function: GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0017171 - serine hydrolase activity [Evidence IDA,ISM] [PMID 14645503]; GO_function: GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]; GO_function: GO:0004185 - serine-type carboxypeptidase activity [Evidence ISA] [PMID 17408619]; GO_process: GO:0046938 - phytochelatin biosynthetic process [Evidence IGI] [PMID 17408619]; GO_process: GO:0006508 - proteolysis [Evidence IEA,IEA]
codon start: 1
product: carboxypeptidase C
translation: MKTSVLISFIVCCTLSQALLNKPLLWKLNSKVIDANPVKLVARQNNPFAALIQGINNFFSGLGFGGSSSSSSSSSNGSSTTSGSDYSTVPAGNPASLGVDSVKQYSGYINVGPSNEDHMFYWFFESRNKPQTDPVVLWLTGGPGCSSLEALFFENGPCKLTNV
SIO_010081: AWJ20_317
subclass of: SO_0000673
so part of: AWJ20_317
location: complement(994984..995475)
location: region:994984-995475:-1
so has part: feature:994984-995475:-1:exon

XP_018734559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:994984-995475:-1:exon

AWJ20_318
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_318
so part of: sequence
location: <996453..>997715
location: region:996453-997715:1
so has part: feature:996453-997715:1:exon
subclass of: SO_0000010

30035173
type: Gene
SIO_000068: ncbigene

position:996453:1
position: 996453
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:997715:1
position: 997715
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996453-997715:1:exon

AWJ20_318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_318
product: hypothetical protein
transcript id: XM_018880184.1
SIO_010081: AWJ20_318
subclass of: SO_0000673
so part of: AWJ20_318
location: <996453..>997715
location: region:996453-997715:1
so has part: feature:996453-997715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:996453-997715:1:exon

AWJ20_318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_318
codon start: 1
product: hypothetical protein
translation: MESVLSLFTPSWAVPGTGLKQVIALAEEEFGADALTPQLIDASVSAMPGIFGDYPQPSDKAPCGIFIAVYSILALAHLFIFVKNKSRGHNFYMSFGLMWYCLFRMIGFALRVRWISDLLNFNMGIASVTFSQLPPLYLNVLCMILGHRIFTWRHPETGNSKYFNVAIILIYIFSAPLVAMAIVGQVIPNIYFLTEKHLRICHQVTQAAAVLNLSYATSGIFLVQLAYFFKPGTIDHRMLRMPKAKLVPHLPPVVQPTWIRSAALTYYPRKGEQIPLYRDGPTGKAIRIIPSRETPAGGLCRPYSNDSSSPNNRVPSIRTAVLIVIVVSAIMTMNIVFRTASTFILKPRGGFPGPLNSWIYHNYVYYIWYGAFEAIANVILLLGRVDLRFYIPDMPIKGTGNELEVHQEKQSASVESFQEV
SIO_010081: AWJ20_318
subclass of: SO_0000673
so part of: AWJ20_318
location: 996453..997715
location: region:996453-997715:1
so has part: feature:996453-997715:1:exon

XP_018734560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:996453-997715:1:exon

AWJ20_319
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: APL2
locus tag: AWJ20_319
so part of: sequence
location: complement(<998912..>1001152)
location: region:998912-1001152:-1
so has part: feature:998912-1001152:-1:exon
subclass of: SO_0000010

30035184
type: Gene
SIO_000068: ncbigene

position:998912:-1
position: 998912
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1001152:-1
position: 1001152
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998912-1001152:-1:exon

AWJ20_319
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: APL2
locus tag: AWJ20_319
product: Apl2p
transcript id: XM_018880195.1
SIO_010081: AWJ20_319
subclass of: SO_0000673
so part of: AWJ20_319
location: complement(<998912..>1001152)
location: region:998912-1001152:-1
so has part: feature:998912-1001152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998912-1001152:-1:exon

AWJ20_319
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: APL2
locus tag: AWJ20_319
note: Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; involved in clathrin-dependent Golgi protein sorting; protein abundance increases in response to DNA replication stress; GO_component: GO:0030121 - AP-1 adaptor complex [Evidence IPI,ISS] [PMID 10564262]; GO_component: GO:0005905 - coated pit [Evidence IEA,IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0030117 - membrane coat [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_function: GO:0030276 - clathrin binding [Evidence IPI,ISS] [PMID 10564262]; GO_function: GO:0008565 - protein transporter activity [Evidence IEA]; GO_process: GO:0006896 - Golgi to vacuole transport [Evidence IMP] [PMID 17003107]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA,IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IPI,ISS] [PMID 10564262]
codon start: 1
product: Apl2p
translation: MSLEKRLRKVFQTPRKGETFELRSGLVSQYAHERKDAIQRTIAAMTLGKDVSSLFPDILKNLATHDLDQKKLVYLYLMNYAKSHPELCILAVNTFVQDSEDPNPLVRALAIRTMGCIRVDKMVDYLSIPLRKTLRDDNPYVRKTAAICVAKLFDLNPNMAIEEGFLTDLQSLVDDSNPMVVANAVSALSEIQESAPEVKTFEISPVTLNKLLVALNECTEWGRIAILTALSQYETSDVKEAEHICERVVPQFQHANPSVVLASIKAVITHLPIQSTNAQNVLLRKMSSPLVTLVSCAPEVQYVALRNIRIILQKYPQILSRELRVFFCRYNDPLYLKFEKLEIMVSLANSQNVDQLLAELKEYSMEVDMEFVRRAIKAIGQCAVKIESAAEKAVNVLLDLLDDNNKTNNYVIQEVVIEIRDILRRYKNAFEGAIPVLCQNIDDIEEPEARAAMIWILGEYAHKIDNAGTILENYVSTFLEEATQVQLQLLTACVKLYIKKPNSGNNLIHSILQDATTKSDNADIRDRAYIYWRLLSSDASVSKDVVLADKPPIKTTIETIPPTILDELLAELSTLASVYHKPASSFMGTGQFGSDEVQKRAIEEQRQLAKEDAISNIDSQTVVNGENLLDLDFDAPASDAASTGSGANSGALGDLGDIFSNSPSPTISSPAIGATATKTNGNQDILSLFGSTSTPVPAAPASSSLNQLTDGFGGLNLQSQTQSQPTTQASSQTQSKSTNEDLLGLF
SIO_010081: AWJ20_319
subclass of: SO_0000673
so part of: AWJ20_319
location: complement(998912..1001152)
location: region:998912-1001152:-1
so has part: feature:998912-1001152:-1:exon

XP_018734561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:998912-1001152:-1:exon

AWJ20_320
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ASC1
locus tag: AWJ20_320
so part of: sequence
location: <1002574..>1003158
location: region:1002574-1003158:1
so has part: feature:1002574-1003158:1:exon
subclass of: SO_0000010

30035196
type: Gene
SIO_000068: ncbigene

position:1002574:1
position: 1002574
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1003158:1
position: 1003158
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002574-1003158:1:exon

AWJ20_320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ASC1
locus tag: AWJ20_320
product: guanine nucleotide-binding protein subunit beta
transcript id: XM_018880207.1
SIO_010081: AWJ20_320
subclass of: SO_0000673
so part of: AWJ20_320
location: <1002574..>1003158
location: region:1002574-1003158:1
so has part: feature:1002574-1003158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002574-1003158:1:exon

AWJ20_320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ASC1
locus tag: AWJ20_320
inference: similar to AA sequence:KEGG_Orthology:K14753
note: G-protein beta subunit and guanine dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; regulates P-body formation induced by replication stress; represses Gcn4p in the absence of amino acid starvation; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IDA] [PMID 15340087]; GO_function: GO:0001965 - G-protein alpha-subunit binding [Evidence IPI] [PMID 17591772]; GO_function: GO:0005092 - GDP-dissociation inhibitor activity [Evidence IDA] [PMID 17591772]; GO_function: GO:0004871 - signal transducer activity [Evidence IMP,IPI] [PMID 17591772]; GO_process: GO:0007186 - G-protein coupled receptor signaling pathway [Evidence IMP,IPI] [PMID 17591772]; GO_process: GO:0010255 - glucose mediated signaling pathway [Evidence IMP,IPI] [PMID 17591772]; GO_process: GO:0001403 - invasive growth in response to glucose limitation [Evidence IMP] [PMID 17591772]; GO_process: GO:0017148 - negative regulation of translation [Evidence IMP] [PMID 15340087]
codon start: 1
product: guanine nucleotide-binding protein subunit beta
translation: MSQNEVLVLRGTLEGHNGWVTALATSASNPDILLSASRDKSLIIWNLTRDEQAYGVPKRSLHGHAHIVQDVTISQDGSYAISASWDKTLRLWDLNDGTTLRRFVGHTGDVLSVSFSPDNRQIVSAGRDRTIKVWNTIGDCKYTYDGQKSHSDWVSTVRFSPATDDKSHTIISAGWDKLVKVSFNISTIFRYCIF
SIO_010081: AWJ20_320
subclass of: SO_0000673
so part of: AWJ20_320
location: 1002574..1003158
location: region:1002574-1003158:1
so has part: feature:1002574-1003158:1:exon

XP_018734562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1002574-1003158:1:exon

AWJ20_321
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: OCT1
locus tag: AWJ20_321
so part of: sequence
location: complement(<1004747..>1007161)
location: region:1004747-1007161:-1
so has part: feature:1004747-1007161:-1:exon
subclass of: SO_0000010

30035207
type: Gene
SIO_000068: ncbigene

position:1004747:-1
position: 1004747
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1007161:-1
position: 1007161
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004747-1007161:-1:exon

AWJ20_321
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: OCT1
locus tag: AWJ20_321
product: Oct1p
transcript id: XM_018880218.1
SIO_010081: AWJ20_321
subclass of: SO_0000673
so part of: AWJ20_321
location: complement(<1004747..>1007161)
location: region:1004747-1007161:-1
so has part: feature:1004747-1007161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004747-1007161:-1:exon

AWJ20_321
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: OCT1
locus tag: AWJ20_321
inference: similar to AA sequence:KEGG_Orthology:K01410
note: Mitochondrial intermediate peptidase; cleaves destabilizing N-terminal residues of a subset of proteins upon import, after their cleavage by mitochondrial processing peptidase (Mas1p-Mas2p); may contribute to mitochondrial iron homeostasis; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IDA] [PMID 8035833]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IDA,IMP] [PMID 8831696]; GO_function: GO:0008237 - metallopeptidase activity [Evidence IEA,IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_process: GO:0006879 - cellular iron ion homeostasis [Evidence IGI,IMP] [PMID 10332043]; GO_process: GO:0006627 - protein processing involved in protein targeting to mitochondrion [Evidence IMP] [PMID 8035833]; GO_process: GO:0050821 - protein stabilization [Evidence IMP] [PMID 21525245]; GO_process: GO:0006508 - proteolysis [Evidence IEA,IEA]
codon start: 1
product: Oct1p
translation: MLRSWSSARKTLPRWSGGLGHGESVLVRRISGLTGPVGPVGPVGVVETRLEARSGKPFLNGGFVLGNRLRRVDGSRQLTTKSTTGLENSTDQSIRDVFDSVEFWKKDFAPGHTNALEPTGLFENRYLTTPQGMVEFTQESLRQAQELTLKIINAGDDPEALHNAIRNFDILSDIICKVIDMVAFVRISHPNKEFINVAQECHELMYDYMNMLNTSVELHDILDKVLGNNDIRNGLSSEEITVGEILLADFKKSGVNLAPHDREKFVRLSSKVSILGQQFLNNIGPAKHHLTFSKSQVWGLDPVLANRLRSFGGRFKIPTYGPVADMALQTISNENTRRDIWLAQRSATDEQVGLLGDFLTARAELARMMGCNSFAEYELKDKMAKTPVNVQRFLDELAQQTNPRAAKELLDLKKLKSDEKATPLAETLLKAWDRDYYAAKHTHSKRSKSKSSDFISAYFSLGTVMQGLSRLFTRIYGISFVPIETKPGEVWDDEVRRLDVVSETEGKIGVIYCDLFQRDGKSPHPAHFTVQCSREITPGEPSYYHQGSSVIRDSTNRCYQLPIIALVCDFVKDPALSKCLLSYSEVQTLFHEMGHAIHSMLGRTSLHNVSGTRCATDFVELPSVLMERFAASPEVMKLFARHHLTDEPLPLSVFNCQLSLQSLYDQTETYHQILISMLDQQVHSELANTPTFDPNAIYYELEKSRGLFEAHPDSRWPAQFGHLFSYGANYYCYLFDRAIADRIWQKLFVNDPTSREAGEHFRREVLSWGGSRDPWQCVSAVLREPSLANGDETAMLEIGRSLKA
SIO_010081: AWJ20_321
subclass of: SO_0000673
so part of: AWJ20_321
location: complement(1004747..1007161)
location: region:1004747-1007161:-1
so has part: feature:1004747-1007161:-1:exon

XP_018734563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1004747-1007161:-1:exon

AWJ20_322
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GLN1
locus tag: AWJ20_322
so part of: sequence
location: complement(<1007892..>1008998)
location: region:1007892-1008998:-1
so has part: feature:1007892-1008998:-1:exon
subclass of: SO_0000010

30035218
type: Gene
SIO_000068: ncbigene

position:1007892:-1
position: 1007892
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1008998:-1
position: 1008998
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007892-1008998:-1:exon

AWJ20_322
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GLN1
locus tag: AWJ20_322
product: glutamate--ammonia ligase
transcript id: XM_018880228.1
SIO_010081: AWJ20_322
subclass of: SO_0000673
so part of: AWJ20_322
location: complement(<1007892..>1008998)
location: region:1007892-1008998:-1
so has part: feature:1007892-1008998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007892-1008998:-1:exon

AWJ20_322
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GLN1
locus tag: AWJ20_322
inference: similar to AA sequence:KEGG_Orthology:K01915
note: Glutamine synthetase (GS); synthesizes glutamine from glutamate and ammonia; with Glt1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source and by amino acid limitation; forms filaments of back-to-back stacks of cylindrical homo-decamers at low pH, leading to enzymatic inactivation and storage during states of advanced cellular starvation; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA,IEA]; GO_function: GO:0004356 - glutamate-ammonia ligase activity [Evidence IMP] [PMID 1347768]; GO_function: GO:0004356 - glutamate-ammonia ligase activity [Evidence IDA] [PMID 4156034]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO_process: GO:0006542 - glutamine biosynthetic process [Evidence IDA] [PMID 6129248]; GO_process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
codon start: 1
product: glutamate--ammonia ligase
translation: MSSAVVSNTATLQKYLDLPQNGAVLAEYIWIDGTNGIRSKCKTLSKSPESIDDLPEWNFDGSSTEQAPGHDSDIYLRPAAIFKDPFRKGDNIIVLAECWNNDGTPNKTNYRHECAKLMEAHKDSKIWFGIEQEYTLFDQYDNVYGWPKGGFPGPQGPYYCGVGTGKVFCRDIVEAHYRACLYAGVDISGINAEVMPSQWEFQVGPCEGIKMGDELTVARYLLTRVAEDFGVKISFHPKPLQGDWNGAGCHTNVSTEQMRNPGGMKYIEEAIEKLSKRHKEHIAVYGEDNDLRLTGRHETASVANFSSGVANRGASVRIPRSVAKEGFGYFEDRRPASNIDPYLVTGIIAETILGSIPEADIVKQVQKE
SIO_010081: AWJ20_322
subclass of: SO_0000673
so part of: AWJ20_322
location: complement(1007892..1008998)
location: region:1007892-1008998:-1
so has part: feature:1007892-1008998:-1:exon

XP_018734564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1007892-1008998:-1:exon

AWJ20_323
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TOD6
locus tag: AWJ20_323
so part of: sequence
location: <1022434..>1024257
location: region:1022434-1024257:1
so has part: feature:1022434-1024257:1:exon
subclass of: SO_0000010

30035229
type: Gene
SIO_000068: ncbigene

position:1022434:1
position: 1022434
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1024257:1
position: 1024257
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022434-1024257:1:exon

AWJ20_323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TOD6
locus tag: AWJ20_323
product: Tod6p
transcript id: XM_018880235.1
SIO_010081: AWJ20_323
subclass of: SO_0000673
so part of: AWJ20_323
location: <1022434..>1024257
location: region:1022434-1024257:1
so has part: feature:1022434-1024257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022434-1024257:1:exon

AWJ20_323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TOD6
locus tag: AWJ20_323
note: PAC motif binding protein involved in rRNA and ribosome biogenesis; subunit of the RPD3L histone deacetylase complex; Myb-like HTH transcription factor; hypophosphorylated by rapamycin treatment in a Sch9p-dependent manner; TOD6 has a paralog, DOT6, that arose from the whole genome duplication; GO_component: GO:0070210 - Rpd3L-Expanded complex [Evidence IDA] [PMID 19040720]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0003677 - DNA binding [Evidence IEA,IEA]; GO_function: GO:0003682 - chromatin binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA,IDA] [PMID 19158363]; GO_process: GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IMP] [PMID 19158363]
codon start: 1
product: Tod6p
translation: MSSQPHHAHAPHASITSGTTPGALTTNTSGSAAGSAGSATATATATTPGNSSSSSISTNTSTTHSSGNTGTPTSTVTATSTVTTNSGSSSGVSGTHSYSQHHPQSLPQPPLSHSQSQLLPQVHPQLQHHHSYEHSQQPHIATSPYHQQMTAPQTYHQQHQQLQQHPLPHHQLQQHPHPHQHHQHPQHPQHPQHPQLQQHHHQQQQHHLHHPYGAAVSHNTDPSLGVGGPIHSHGQHHGHAGHHGQVTPIYSPQGEGRRKTPSSWDPHDDLLLRHLKEQLKLGWKEIAAYFPNRTTNACQFRWRRLVSGTLRSSTGGVATPNGGGPLSPGGSTSPTHSDNGMPDASSDLNRRSSSISSTLSNPTNALQTYQASYEQQQLQHPHIHGHHHSQPTLPSFQYRQPSQGQVNAAPAQITSSTQSSVNWTKEQDDLVRSRQDLRPDELSLLLGVSEQDIKTRLSQLDIKSTTPTTTGTTTPSSVTAADSVVAKSLANYQLSTPTSEPISEHPDNVTIVEHDIDGDSGAEDGVPRTLVGRNRSGSHPRPLLPRKMSGSHFNSLKLPVPILQRPPSFSEASPAASSTAPANPSSAATPTPTTPVTPAGSYFTAQS
SIO_010081: AWJ20_323
subclass of: SO_0000673
so part of: AWJ20_323
location: 1022434..1024257
location: region:1022434-1024257:1
so has part: feature:1022434-1024257:1:exon

XP_018734565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1022434-1024257:1:exon

AWJ20_324
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SAS3
locus tag: AWJ20_324
so part of: sequence
location: complement(<1025407..>1027704)
location: region:1025407-1027704:-1
so has part: feature:1025407-1027704:-1:exon
subclass of: SO_0000010

30035240
type: Gene
SIO_000068: ncbigene

position:1025407:-1
position: 1025407
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1027704:-1
position: 1027704
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025407-1027704:-1:exon

AWJ20_324
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SAS3
locus tag: AWJ20_324
product: Sas3p
transcript id: XM_018880244.1
SIO_010081: AWJ20_324
subclass of: SO_0000673
so part of: AWJ20_324
location: complement(<1025407..>1027704)
location: region:1025407-1027704:-1
so has part: feature:1025407-1027704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025407-1027704:-1:exon

AWJ20_324
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SAS3
locus tag: AWJ20_324
inference: similar to AA sequence:KEGG_Orthology:K11378
note: Histone acetyltransferase catalytic subunit of NuA3 complex; acetylates histone H3, involved in transcriptional silencing; homolog of the mammalian MOZ proto-oncogene; mutant has aneuploidy tolerance; sas3gcn5 double mutation is lethal; GO_component: GO:0033100 - NuA3 histone acetyltransferase complex [Evidence IDA] [PMID 10817755]; GO_component: GO:0033100 - NuA3 histone acetyltransferase complex [Evidence IDA] [PMID 17157260]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_function: GO:0004402 - histone acetyltransferase activity [Evidence IEA]; GO_function: GO:0004402 - histone acetyltransferase activity [Evidence IDA,IMP] [PMID 10817755]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016746 - transferase activity, transferring acyl groups [Evidence IEA]; GO_function: GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IMP] [PMID 11731478]; GO_process: GO:0030466 - chromatin silencing at silent mating-type cassette [Evidence IMP] [PMID 11731479]; GO_process: GO:0006348 - chromatin silencing at telomere [Evidence IMP] [PMID 11731479]; GO_process: GO:0016573 - histone acetylation [Evidence IDA,IMP] [PMID 10817755]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA,IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]
codon start: 1
product: Sas3p
translation: MPPVNRRTNAVQAAPKGSLIDPLKDRKYWTTLLREGGLDERRSPTNSPKKAVKNEIQGLKRARGTDTPPRSPNGGHKSPVTKQGRTANGQFAPKERPLLAGGELWPVSRAGSRSSRPARDREVEKARKPERRNRPVERASRPSGLEKVPVIAPELVVDTPETTVPTPASRNRARRSRTVIDDEDVDEDDDLIRPVGRLRQRKAAEKETKLVTTLRRGLLVIRLPEWKLRPLKQTSRLKKLIPAREVLAASSLYDHNNNSSSRSINNHSRSINNNNSSKSRIKDNSSHKKLKIRFHLSSPAGGGSPVGITNGTLTRTDGLSSATGSTPFFFEEEEYVDDSDVQPYRGVITGDDADTSLTYPTDQDREWFEDALAMVETKQSWLNNDDVENYGNEIEYTDDGGVTSRKKKRRTDSVPPPTTTSTMGITRVSNIRKIHMANYEIDTWYISPYPEEYSRHRILCICEFCLKYMSSDYVAQRHALKCQYRHPPGTEIYRHEGNSIFEVDGAKSPLYCQNLCLMAKLFLDSKTLYYDVEPFMFYVLTENDDKGCHFVGYFSKQKVASATTPPVAPAITDSPGSSTSHETISTTDPITNGSAHDGTNGTATTATSSSAPAEPIPAVRNNVSCIVTLPTAQRKGYGNFLIDFSYLLTRCEKTVGTPEKPLSDLGLASYTNYWKHTLCYELRKLRNSADPATEISIDTISQTTGMTLDDVVFGLETLGFLVQTPQKSYTLQIDDRVLDDIIAKWESKNYRRVHPEKLLWVPLTL
SIO_010081: AWJ20_324
subclass of: SO_0000673
so part of: AWJ20_324
location: complement(1025407..1027704)
location: region:1025407-1027704:-1
so has part: feature:1025407-1027704:-1:exon

XP_018734566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1025407-1027704:-1:exon

AWJ20_325
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: AIM10
locus tag: AWJ20_325
so part of: sequence
location: <1028930..>1030585
location: region:1028930-1030585:1
so has part: feature:1028930-1030585:1:exon
subclass of: SO_0000010

30035251
type: Gene
SIO_000068: ncbigene

position:1028930:1
position: 1028930
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1030585:1
position: 1030585
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028930-1030585:1:exon

AWJ20_325
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: AIM10
locus tag: AWJ20_325
product: putative proline--tRNA ligase AIM10
transcript id: XM_018880253.1
SIO_010081: AWJ20_325
subclass of: SO_0000673
so part of: AWJ20_325
location: <1028930..>1030585
location: region:1028930-1030585:1
so has part: feature:1028930-1030585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028930-1030585:1:exon

AWJ20_325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: AIM10
locus tag: AWJ20_325
inference: similar to AA sequence:KEGG_Orthology:K01881
note: Protein with similarity to tRNA synthetases; non-tagged protein is detected in purified mitochondria; null mutant is viable and displays elevated frequency of mitochondrial genome loss; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA,IEA]; GO_function: GO:0004827 - proline-tRNA ligase activity [Evidence IEA,IEA]; GO_function: GO:0004827 - proline-tRNA ligase activity [Evidence ISS] [PMID 10592175]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]
codon start: 1
product: putative proline--tRNA ligase AIM10
translation: MASGLKRLSRFFAPLRKFKPNAETSSSELLTNYGYLRQSSSGVYNMLPLGNLVQSRIESIIRNRLDEVDCAETSLCTLASTKIWKASGRLQTGTEFFMLEDGKYLLAPTNEEEVTSMVAELSSYKQVPLRLYQISRKYRNEKRPRGGLLRGREFTMKDLYSFDETMNDAMTTYRDIQGAYNRIFEDIGIDFEVAEADSGSIGGSLSHEYHYESDAGEDLVVKCTSSSCDYTANTERAVSTAADTSVKIGLADAAVKFYALDETLPSKSEKSLTVYAAIFPAGRSINPHLLKGHSAVQGSELAEISADSVSKMSATILPLIDTRVEYELSKNREQLTTIITSLIEPDNSNHSKYSVVEAVQAPIVEVQTGETCPSCHSAPLKIVPAIEVGHTFYLGTKYSEPLNARITTQSTGKMEPLYMGCYGIGVSRLISAIAEKTRDSDGLAWPKSVTPFDAVIVANSEADALKIHQHLSTHNIRAVWDDRSTQFGVLLANARATGFPLAIIAGRSYTQTGQLEIQLRNKPAKSHPPTLVSLDDLGPTAHHMLQTYSPA
SIO_010081: AWJ20_325
subclass of: SO_0000673
so part of: AWJ20_325
location: 1028930..1030585
location: region:1028930-1030585:1
so has part: feature:1028930-1030585:1:exon

XP_018734567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1028930-1030585:1:exon

AWJ20_326
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PIN4
locus tag: AWJ20_326
so part of: sequence
location: complement(<1031592..>1034678)
location: region:1031592-1034678:-1
so has part: feature:1031592-1034678:-1:exon
subclass of: SO_0000010

30035262
type: Gene
SIO_000068: ncbigene

position:1031592:-1
position: 1031592
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1034678:-1
position: 1034678
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031592-1034678:-1:exon

AWJ20_326
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PIN4
locus tag: AWJ20_326
product: Pin4p
transcript id: XM_018880264.1
SIO_010081: AWJ20_326
subclass of: SO_0000673
so part of: AWJ20_326
location: complement(<1031592..>1034678)
location: region:1031592-1034678:-1
so has part: feature:1031592-1034678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1031592-1034678:-1:exon

AWJ20_326
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PIN4
locus tag: AWJ20_326
note: Protein involved in G2/M phase progression and response to DNA damage; interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 23222640]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 23222640]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_process: GO:0000077 - DNA damage checkpoint [Evidence IGI,IPI] [PMID 15024067]; GO_process: GO:0000086 - G2/M transition of mitotic cell cycle [Evidence IMP] [PMID 15024067]
codon start: 1
product: Pin4p
translation: MAESSLFGRSAMYQQQHQQHQSSQLSGTGGGDSFLKASPGPGSLLGSGSGSSSGPGSAGSPGSGPPGASSSSANSASASAVRRIQSRHFDFLAGASGSATGSGAGSGTGSGSSGSSGNNNNNNSGSGNSGSGSELPGFEGLGHAHGVHGHGSGGSAAAGWGTNGQQTQLTAQLNGGSGLPGQLSGQMPPPGQFHGQLPGHLSGQLPVQLPGQGLGPGLGQGLSQLPGQGLNQGLNQGLGQSLNQGLNQGLGQGLGQGLSQGLNQGLNQGLGQGLGQGMSQALGQRSNAASLSPLPRATSPLPPFPGQSVWLDQSSASLRSISPHPKPASSNSSINEVQLQQQAPLQPLQPNGSGGNGGNGGPVNVGLIPPPSTSPSAVSVSSSSNLVGDDELIPTAIVIKNIPFAIKKEQLLDVMTSMGLPLPYAFNYHFDSGVFRGLAFANFTSPEETGAVISNLNGREIGGRKLRVEYKKMLPLVERERIEREKRERRGQLEEQHRSSSGPKGLNNSGLGGNSGGNGNSGGNAGGNGGAGNGGGNGAGNSGSMGSGNGGGGSGSGNGGGSGHHHGHNHHHNHHGGNNHQQMNHVGNSHHHGGNQHHGPSNHSPKMVDLNDPETLDFYSQILLFRDDKNRSELIFPATLLPHQRKIVAVLSGQLGLMFSGDRVNGGPVAVLKPQQQPQLQQQQQQQHQQQHQQHPQHPQQHQQQLHQQQQQQHHLQQPPMPQFQGQQSFQQQPQQNQPQPPQQQPQQYQQPPPPGLFDYNGSSSGQIHHPQPQYVGGVGGMGVGIGSGAAGSGQFSSQGPPPPQQGLFQPQPQQPVPPLVQQQSGGSGSGGQLRGTKSFADIRAPASYPYNISAPGTPSGSPFFPSQTPPPGSKQQQQQQQQQQQQQPQGHQQQPPQQFLPLMSLQQQQRGYPYLGQTGQPQIGFPSQQQQQQSQGQSQAQSQTAGKHQSSQSFDLSNSVGSLSDSFSSALSLSGSSSGRQHAAVGSVGSASPTASINSIHDSVASSSGGNSSAGVIGSKSGVHDDN
SIO_010081: AWJ20_326
subclass of: SO_0000673
so part of: AWJ20_326
location: complement(1031592..1034678)
location: region:1031592-1034678:-1
so has part: feature:1031592-1034678:-1:exon

XP_018734568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031592-1034678:-1:exon

AWJ20_327
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: IBA57
locus tag: AWJ20_327
so part of: sequence
location: <1036396..>1037850
location: region:1036396-1037850:1
so has part: feature:1036396-1037850:1:exon
subclass of: SO_0000010

30035273
type: Gene
SIO_000068: ncbigene

position:1036396:1
position: 1036396
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1037850:1
position: 1037850
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036396-1037850:1:exon

AWJ20_327
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: IBA57
locus tag: AWJ20_327
product: Iba57p
transcript id: XM_018880275.1
SIO_010081: AWJ20_327
subclass of: SO_0000673
so part of: AWJ20_327
location: <1036396..>1037850
location: region:1036396-1037850:1
so has part: feature:1036396-1037850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1036396-1037850:1:exon

AWJ20_327
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: IBA57
locus tag: AWJ20_327
note: Protein involved in incorporating iron-sulfur clusters into proteins; mitochondrial matrix protein; involved in the incorporation of iron-sulfur clusters into mitochondrial aconitase-type proteins; activates the radical-SAM family members Bio2p and Lip5p; interacts with Ccr4p in the two-hybrid system; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IDA] [PMID 18086897]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0016226 - iron-sulfur cluster assembly [Evidence IMP] [PMID 18086897]
codon start: 1
product: Iba57p
translation: MVGGHVRSSQGVRTVAGSITPGLMRGLSYYTPQSPPPEPPLRGYTKLNRRLVYVRGQDAPKFLNGLITNHLTGPDDHGAFGFYAAFLNSKGRIISDSFIYPTHYSTLMSDTANAVGVGSRSTTGDGSSSSEVPGYLVECDSSLASSLVSMLKLHKLRSRVEISLVEDTGSSPKVWQVWDDSTVTDSLPLDITNQSILVPYCPSLVGASDSRAPGFGLRLVLPGNQTPLDVLSEAFVSADEFPECSPDAYHIRRLVYGIPEGASELPPNSSLPLDSCMDYMGGVDFNKGCYQGQELTIRSHHHGIVRKRIIPVVLSPPLTSDSNPDPATHSLDQSESSSQPSNKSSDELVQQEYELESEPALEYNPSSPVATSINSASLAGSSILDISASLGDSSRLARVTDNPSPFGVSKKSKPSSSSSSSPSLRPSGTLLSAIGNVGLALVRLEHFGSSTAQFAIQTPAGNIRVHGFQPYWWPSPDDNTDSSA
SIO_010081: AWJ20_327
subclass of: SO_0000673
so part of: AWJ20_327
location: 1036396..1037850
location: region:1036396-1037850:1
so has part: feature:1036396-1037850:1:exon

XP_018734569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1036396-1037850:1:exon

AWJ20_328
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ARO4
locus tag: AWJ20_328
so part of: sequence
location: <1039143..>1040264
location: region:1039143-1040264:1
so has part: feature:1039143-1040264:1:exon
subclass of: SO_0000010

30035284
type: Gene
SIO_000068: ncbigene

position:1039143:1
position: 1039143
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1040264:1
position: 1040264
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039143-1040264:1:exon

AWJ20_328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ARO4
locus tag: AWJ20_328
product: 3-deoxy-7-phosphoheptulonate synthase ARO4
transcript id: XM_018880286.1
SIO_010081: AWJ20_328
subclass of: SO_0000673
so part of: AWJ20_328
location: <1039143..>1040264
location: region:1039143-1040264:1
so has part: feature:1039143-1040264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1039143-1040264:1:exon

AWJ20_328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ARO4
locus tag: AWJ20_328
inference: similar to AA sequence:KEGG_Orthology:K01626
note: 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase; catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by tyrosine or high concentrations of phenylalanine or tryptophan; relative distribution to the nucleus increases upon DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA,IEA]; GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IDA] [PMID 2880280]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0009058 - biosynthetic process [Evidence IEA]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]; GO_process: GO:0009423 - chorismate biosynthetic process [Evidence TAS] [PMID 1943992]; GO_process: GO:0006950 - response to stress [Evidence IEA]
codon start: 1
product: 3-deoxy-7-phosphoheptulonate synthase ARO4
translation: MSATNSPMFGPDGVSRSGSPVEQSEDVRILGYDPLIAPALLQNEIPASAKSVATVSKGRKEAIKVLNRASDKLVCIVGPCSIHDPEAALEYASRLKKLSDELDGELVVIMRAYLEKPRTTVGWKGLINDPDVNESFNINKGLRVARKLFVDLTDLGVPIASEMLDTISPQFLADQLSLGAIGARTTESQLHRELASGLSFPIGFKNGTDGSAGVAIDAVKAASVSHHFMGVTKQGLAAITTTKGNENCFIILRGGTKGTNYDEASVKAIKEKLAGSSTTIMVDCSHGNSNKDYRNQPKVNSEVARQIANGEDTLVGVMIESHINEGKQSVGPEGKAGLKYGVSITDACVNWETTEVMLRELADAVKARRALKN
SIO_010081: AWJ20_328
subclass of: SO_0000673
so part of: AWJ20_328
location: 1039143..1040264
location: region:1039143-1040264:1
so has part: feature:1039143-1040264:1:exon

XP_018734570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1039143-1040264:1:exon

AWJ20_329
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HIS7
locus tag: AWJ20_329
so part of: sequence
location: <1042234..>1043904
location: region:1042234-1043904:1
so has part: feature:1042234-1043904:1:exon
subclass of: SO_0000010

30035295
type: Gene
SIO_000068: ncbigene

position:1042234:1
position: 1042234
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1043904:1
position: 1043904
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042234-1043904:1:exon

AWJ20_329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HIS7
locus tag: AWJ20_329
product: imidazoleglycerol-phosphate synthase
transcript id: XM_018880296.1
SIO_010081: AWJ20_329
subclass of: SO_0000673
so part of: AWJ20_329
location: <1042234..>1043904
location: region:1042234-1043904:1
so has part: feature:1042234-1043904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1042234-1043904:1:exon

AWJ20_329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HIS7
locus tag: AWJ20_329
inference: similar to AA sequence:KEGG_Orthology:K01663
note: Imidazole glycerol phosphate synthase; glutamine amidotransferase:cyclase that catalyzes the fifth step of histidine biosynthesis and also produces 5-aminoimidazole-4-carboxamide ribotide (AICAR), a purine precursor; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005622 - intracellular [Evidence TAS] [PMID 8852895]; GO_function: GO:0003824 - catalytic activity [Evidence IEA,IEA]; GO_function: GO:0004359 - glutaminase activity [Evidence IDA] [PMID 10733892]; GO_function: GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]; GO_function: GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IDA] [PMID 10733892]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_function: GO:0016833 - oxo-acid-lyase activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016763 - transferase activity, transferring pentosyl groups [Evidence IEA]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0006541 - glutamine metabolic process [Evidence IEA]; GO_process: GO:0000105 - histidine biosynthetic process [Evidence IEA,IEA,IEA]; GO_process: GO:0000105 - histidine biosynthetic process [Evidence IMP] [PMID 14190241]; GO_process: GO:0008152 - metabolic process [Evidence IEA,IEA]; GO_process: GO:0006950 - response to stress [Evidence IEA]
codon start: 1
product: imidazoleglycerol-phosphate synthase
translation: MSDLVYVIDVESGNLQSLQNAVEKLGYRVKWVKNREQGLEAVDKAQRMILPGVGNFGHFMDELHGRGLADTVLEYIKSGKPLMGICVGLQSIFKGSVESPTAQGLGLIDIRLSRFDDSEKSVPHIGWNGTVLKGQEGDDITKSTPSLYGIDPSQKYYFVHSFAAVLSNETQIQALQGWEYAQAQYGSEKFVAAVAKDNVFLTQFHPEKSGEAGLFVIDSFLKGNKHARISTELASHKTAPGLTKRVIACLDVRTNDAGDIVVTKGDQYDVREKEGSAVRNLGKPVQVAEKYYKQGADEVTFLNITSFRNSPLKDLPMLEILRLTSKTVFVPLTIGGGIRDTVDPATGKVVPALEVADMYFRSGADKVSIGSDAVDAAEKYYANGRKGDGTSPLETISKPYGVQAVVVSIDPKRVYVQSPSDVKHHTFKTKYPGPNGEEYVWYQTTVKGGRETRDLGAYELAQASEALGAGELLLNCIDKDGTNSGFDLELINDIKSAVKIPVIASSGAGRPEHFEEVFTKTTTDAALGAGMFHRDEYTVSDVKKCLQTAGFPTRLT
SIO_010081: AWJ20_329
subclass of: SO_0000673
so part of: AWJ20_329
location: 1042234..1043904
location: region:1042234-1043904:1
so has part: feature:1042234-1043904:1:exon

XP_018734571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1042234-1043904:1:exon

AWJ20_330
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: VPS75
locus tag: AWJ20_330
so part of: sequence
location: complement(<1044129..>1044782)
location: region:1044129-1044782:-1
so has part: feature:1044129-1044782:-1:exon
subclass of: SO_0000010

30035307
type: Gene
SIO_000068: ncbigene

position:1044129:-1
position: 1044129
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1044782:-1
position: 1044782
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044129-1044782:-1:exon

AWJ20_330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: VPS75
locus tag: AWJ20_330
product: Vps75p
transcript id: XM_018880308.1
SIO_010081: AWJ20_330
subclass of: SO_0000673
so part of: AWJ20_330
location: complement(<1044129..>1044782)
location: region:1044129-1044782:-1
so has part: feature:1044129-1044782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044129-1044782:-1:exon

AWJ20_330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: VPS75
locus tag: AWJ20_330
note: NAP family histone chaperone; binds to histones and Rtt109p, stimulating histone acetyltransferase activity; possesses nucleosome assembly activity in vitro; proposed role in vacuolar protein sorting and in double-strand break repair; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia; GO_component: GO:0000785 - chromatin [Evidence IDA] [PMID 17344218]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 22932476]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22932476]; GO_function: GO:0010698 - acetyltransferase activator activity [Evidence IDA,IMP] [PMID 19172749]; GO_function: GO:0042393 - histone binding [Evidence IDA,IPI] [PMID 17344218]; GO_process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IMP,IPI] [PMID 18036332]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IDA] [PMID 17344218]; GO_process: GO:0035066 - positive regulation of histone acetylation [Evidence IDA,IGI,IMP] [PMID 18458063]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Vps75p
translation: MAVKYSTKVLKPVYEERREATRNVPKFWPTVLDSSELLAEYITYEDTEVLDHLVDLYVEWDEDNVKNFTIHWEFSENDFLETNKVSKRFELVEAEKSGEGDDEDDEDAEDSYTSTPVALKWKKGKNLTKPKDGRDTSFFNWFSFSGEGPGDYKGGENIAVIIAEELFPHALKFFADAFSEGDLAEYELDDEEDDDEDDEVEGDAEHEDAPPRKKSKN
SIO_010081: AWJ20_330
subclass of: SO_0000673
so part of: AWJ20_330
location: complement(1044129..1044782)
location: region:1044129-1044782:-1
so has part: feature:1044129-1044782:-1:exon

XP_018734572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1044129-1044782:-1:exon

AWJ20_331
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_331
so part of: sequence
location: complement(<1045507..>1046907)
location: region:1045507-1046907:-1
so has part: feature:1045507-1046907:-1:exon
subclass of: SO_0000010

30035318
type: Gene
SIO_000068: ncbigene

position:1045507:-1
position: 1045507
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1046907:-1
position: 1046907
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045507-1046907:-1:exon

AWJ20_331
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_331
product: membrane transporter
transcript id: XM_018880319.1
SIO_010081: AWJ20_331
subclass of: SO_0000673
so part of: AWJ20_331
location: complement(<1045507..>1046907)
location: region:1045507-1046907:-1
so has part: feature:1045507-1046907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1045507-1046907:-1:exon

AWJ20_331
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_331
note: top hit is XP_007844384.1 originated in Moniliophthora roreri MCA 2997
codon start: 1
product: membrane transporter
translation: MPFAFQTRLGIAEDQVQTWVSTSLAIYAAGVIVGSLVVGAISDKLGQRRAFMISGFVVMEGATCMLCFPKSLALYMVGRTLQGVSAAIAWGIGFAIISDSAEPDQVALLMSYPSMGLSLGIFLGPLLGGVMYDRAGYYSVFYLCFGVFGLDILVRFLMTEKSTLEQKLKKYELYEKKRQEAFGEIMMTTTSHSGSINPGHASQSESTMSSDSTIEQSEEEERQNFSLRHSFRKMTLIQLLQSPRVLNNLFLTFILVWFSGNLDATMTIHLADIFNFNSLYSGLMFLAIVAPMVLEPVCGYVSDKYGGRYLVTAGFIWICPSLMLMWIPHENTTGHIVMFIAFLVMVGIGFTLVFTPLMAEMTNAVNEIDRANPGTLGGGKGFAQAYGLVNIASSLGQIVGPYQGGAVMSRYGWGINVLIMGLLALVAAVPGFLLTGGKEPPSHSSNSLTPENSDPQIPLQSESIDD
SIO_010081: AWJ20_331
subclass of: SO_0000673
so part of: AWJ20_331
location: complement(1045507..1046907)
location: region:1045507-1046907:-1
so has part: feature:1045507-1046907:-1:exon

XP_018734573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1045507-1046907:-1:exon

AWJ20_332
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_332
so part of: sequence
location: complement(<1048177..>1048953)
location: region:1048177-1048953:-1
so has part: feature:1048177-1048953:-1:exon
subclass of: SO_0000010

30035329
type: Gene
SIO_000068: ncbigene

position:1048177:-1
position: 1048177
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1048953:-1
position: 1048953
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048177-1048953:-1:exon

AWJ20_332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_332
product: hypothetical protein
transcript id: XM_018880330.1
SIO_010081: AWJ20_332
subclass of: SO_0000673
so part of: AWJ20_332
location: complement(<1048177..>1048953)
location: region:1048177-1048953:-1
so has part: feature:1048177-1048953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048177-1048953:-1:exon

AWJ20_332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_332
codon start: 1
product: hypothetical protein
translation: MTATTTVSLEEHPKYVILDESKWTLKAESTHKGPSPWATTPNEGASVQRTEAPLKPSGALDQYKYTDLTPVIGREYHDIQLAEILDDDDKIRDLAINIAYRGVAFFRGQKITVEQQKVLAQKLTSLTFQPKTSSLHIHPITPGGGFLRPDGSIDPEVTLISSEYGKKVYHKDYKENKALASKGIHQDFAFETIPSAFSILKIIEPLETGGDTLWWSGAGLYDKLSDPFKRYLETLTGTFSGNQIGTWQEKFKLFNGPR
SIO_010081: AWJ20_332
subclass of: SO_0000673
so part of: AWJ20_332
location: complement(1048177..1048953)
location: region:1048177-1048953:-1
so has part: feature:1048177-1048953:-1:exon

XP_018734574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048177-1048953:-1:exon

AWJ20_333
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_333
so part of: sequence
location: complement(<1051165..>1051236)
location: region:1051165-1051236:-1
so has part: feature:1051165-1051236:-1:exon
subclass of: SO_0000663

30035340
type: Gene
SIO_000068: ncbigene

position:1051165:-1
position: 1051165
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1051236:-1
position: 1051236
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051165-1051236:-1:exon

AWJ20_333
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_333
product: tRNA-Arg
SIO_010081: AWJ20_333
subclass of: SO_0000673
so part of: AWJ20_333
location: complement(<1051165..>1051236)
location: region:1051165-1051236:-1
so has part: feature:1051165-1051236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051165-1051236:-1:exon

AWJ20_334
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CCT3
locus tag: AWJ20_334
so part of: sequence
location: <1052311..>1053867
location: region:1052311-1053867:1
so has part: feature:1052311-1053867:1:exon
subclass of: SO_0000010

30035351
type: Gene
SIO_000068: ncbigene

position:1052311:1
position: 1052311
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1053867:1
position: 1053867
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052311-1053867:1:exon

AWJ20_334
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CCT3
locus tag: AWJ20_334
product: Cct3p
transcript id: XM_018880350.1
SIO_010081: AWJ20_334
subclass of: SO_0000673
so part of: AWJ20_334
location: <1052311..>1053867
location: region:1052311-1053867:1
so has part: feature:1052311-1053867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052311-1053867:1:exon

AWJ20_334
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CCT3
locus tag: AWJ20_334
inference: similar to AA sequence:KEGG_Orthology:K09495
note: Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; capable of binding Q/N rich proteins and mediating their folding; GO_component: GO:0005832 - chaperonin-containing T-complex [Evidence IPI] [PMID 15704212]; GO_component: GO:0005832 - chaperonin-containing T-complex [Evidence IDA] [PMID 16762366]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0051082 - unfolded protein binding [Evidence IEA]; GO_function: GO:0051082 - unfolded protein binding [Evidence IDA] [PMID 16762366]; GO_process: GO:0044267 - cellular protein metabolic process [Evidence IEA]; GO_process: GO:0006457 - protein folding [Evidence IEA]; GO_process: GO:0006457 - protein folding [Evidence IDA] [PMID 16762366]
codon start: 1
product: Cct3p
translation: MCRVADIVRTCLGPKAMLKMLLDPMGGIVLTNDGHAILREIEVTHPAAKSMIELSRTQDEEVGDGTTTVIILAGEILAQAYGPLERNIHPVVIISALKEALKDALEVIHEISRPIDVENDAAMVKLISASIGTKFVARWSTLMCKLALQAVKTVMRTDTNGRKEIDIKRYARIEKIPGGEIEDSRVLDGVMLNKDITHPKMRRRIENPRVLLLDCPLEYKKGESQTNIEITKEEEWNRVLQIEEEQIKAMCEIIASFKPDLVITEKGVSDLAQHYLLKANISALRRVRKGDNNRIARATGATIVNRVEDIRESDIGTQCGLFNIELIGDEYFTFLTECEDPGACTILLRGPSKDILSEIDRNLQDAMSVARNVCFEPRLSPGGGATEMALSVRLAERAKAIEGVSQWPYKAVADALEVIPRTLIQNCGGNPIRVLTQLRAKHAEGLYTYGIDGENGKVVDMNEYGIWEPEAIKLQSIKTAIESACLLLRVDDIVSGVRKQGEKTGRLQGPEDVPASQE
SIO_010081: AWJ20_334
subclass of: SO_0000673
so part of: AWJ20_334
location: 1052311..1053867
location: region:1052311-1053867:1
so has part: feature:1052311-1053867:1:exon

XP_018734575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1052311-1053867:1:exon

AWJ20_335
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_335
so part of: sequence
location: complement(<1053132..>1053512)
location: region:1053132-1053512:-1
so has part: feature:1053132-1053512:-1:exon
subclass of: SO_0000010

30035362
type: Gene
SIO_000068: ncbigene

position:1053132:-1
position: 1053132
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1053512:-1
position: 1053512
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053132-1053512:-1:exon

AWJ20_335
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_335
product: hypothetical protein
transcript id: XM_018880361.1
SIO_010081: AWJ20_335
subclass of: SO_0000673
so part of: AWJ20_335
location: complement(<1053132..>1053512)
location: region:1053132-1053512:-1
so has part: feature:1053132-1053512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1053132-1053512:-1:exon

AWJ20_335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_335
codon start: 1
product: hypothetical protein
translation: MALALSASRTERAISVAPPPGDSLGSKHTLRATDMASCKLRSISDKISLEGPRNRIVQAPGSSHSVKNVKYSSPMSSILNKPHWVPMSDSRISSTRFTIVAPVALAIRLLSPLRTLRRAEILAFNR
SIO_010081: AWJ20_335
subclass of: SO_0000673
so part of: AWJ20_335
location: complement(1053132..1053512)
location: region:1053132-1053512:-1
so has part: feature:1053132-1053512:-1:exon

XP_018734576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1053132-1053512:-1:exon

AWJ20_336
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SSU1
locus tag: AWJ20_336
so part of: sequence
location: complement(<1054782..>1055975)
location: region:1054782-1055975:-1
so has part: feature:1054782-1055975:-1:exon
subclass of: SO_0000010

30035373
type: Gene
SIO_000068: ncbigene

position:1054782:-1
position: 1054782
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1055975:-1
position: 1055975
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054782-1055975:-1:exon

AWJ20_336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SSU1
locus tag: AWJ20_336
product: Ssu1p
transcript id: XM_018880371.1
SIO_010081: AWJ20_336
subclass of: SO_0000673
so part of: AWJ20_336
location: complement(<1054782..>1055975)
location: region:1054782-1055975:-1
so has part: feature:1054782-1055975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054782-1055975:-1:exon

AWJ20_336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SSU1
locus tag: AWJ20_336
note: Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 9294463]; GO_function: GO:0000319 - sulfite transmembrane transporter activity [Evidence IDA] [PMID 10870099]; GO_process: GO:0000316 - sulfite transport [Evidence IDA] [PMID 10870099]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Ssu1p
translation: MFGRVNSNASSETVVNHLTMTAGIKSYLLARVNYFTPAWFAAVMGVGISSIILYTFPFNARWLRILGVIIWGFNMGLFGIANILFVSRFLLHPAAFAQLLRDPTQSVFLGCWPMGFATIINMTDLQFGRDAWKATYAMWWIDVFVSLFTAWYVVFCMYSKHDRKSTESINATILLPVVAVVVASSTGALITANLPKQLQESTIIITALLWGNGELLGFTCTAIYIHRLLRSNLPPSQLAISNFLPVGPLGQGSFGIIIITSNLATLLAERQVLTVPESALVRYAGIGIAMAMMGYACFWVSIAFLAILTDPPKSFNPGWWGLTFPLGTFVLGWYRLADETGLLAFKVLGAIFGGIEVLLALTCTIQSINHAVIHDTLFRAPTVAPAPNSQTVDKETV
SIO_010081: AWJ20_336
subclass of: SO_0000673
so part of: AWJ20_336
location: complement(1054782..1055975)
location: region:1054782-1055975:-1
so has part: feature:1054782-1055975:-1:exon

XP_018734577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1054782-1055975:-1:exon

AWJ20_337
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_337
so part of: sequence
location: complement(<1057475..>1057545)
location: region:1057475-1057545:-1
so has part: feature:1057475-1057545:-1:exon
subclass of: SO_0000663

30035384
type: Gene
SIO_000068: ncbigene

position:1057475:-1
position: 1057475
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1057545:-1
position: 1057545
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057475-1057545:-1:exon

AWJ20_337
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_337
product: tRNA-Gly
SIO_010081: AWJ20_337
subclass of: SO_0000673
so part of: AWJ20_337
location: complement(<1057475..>1057545)
location: region:1057475-1057545:-1
so has part: feature:1057475-1057545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057475-1057545:-1:exon

AWJ20_338
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_338
so part of: sequence
location: <1060633..>1062288
location: region:1060633-1062288:1
so has part: feature:1060633-1062288:1:exon
subclass of: SO_0000010

30035395
type: Gene
SIO_000068: ncbigene

position:1060633:1
position: 1060633
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1062288:1
position: 1062288
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060633-1062288:1:exon

AWJ20_338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_338
product: gag-pol fusion protein
transcript id: XM_018880391.1
SIO_010081: AWJ20_338
subclass of: SO_0000673
so part of: AWJ20_338
location: <1060633..>1062288
location: region:1060633-1062288:1
so has part: feature:1060633-1062288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060633-1062288:1:exon

AWJ20_338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_338
note: Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 9448009]; GO_component: GO:0000943 - retrotransposon nucleocapsid [Evidence ISS] [PMID 9582191]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA,IEA]; GO_function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence ISS] [PMID 9582191]; GO_function: GO:0003723 - RNA binding [Evidence IEA,IEA]; GO_function: GO:0003723 - RNA binding [Evidence ISS] [PMID 9582191]; GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]; GO_function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA,IEA]; GO_function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence ISS] [PMID 9582191]; GO_function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004519 - endonuclease activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0004518 - nuclease activity [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence ISS] [PMID 9582191]; GO_function: GO:0004540 - ribonuclease activity [Evidence ISS] [PMID 9582191]; GO_function: GO:0016740 -…
codon start: 1
product: gag-pol fusion protein
translation: MDEYKTPKERGPLVPSSSQSLPTIRPVEPTATSQESVQSVTFSRDTEMLKRINQSLEKDPKYSKILQHFRNPQHSPFPGDKKEKLRYSYKNEILRYLGKIVVGVDEELHEDLIKLFHDHWIGGHHGIRRTRRALTKVFTWPNISEYVEKYVKSCLTCQKFRIRNHAPYGLLKPLPIPDRPFQSISLDFVTTLPESGPRKSTQILVIVDRFSKYVQCYPCSTNTNAIELATCMKDYFDRFGPPDTIISDRGTQFTSNFWRSFTASRDIKLQFSTAYHPQTDGQTERMNREVIRHIAKYINPQHNNWSELLSEATFAINTTYNESIKNSPYKVVFGFEPNIHFNFEAAEAYPTMEAKLAHQADLHNSTKDIIRHSQQQQAKYHNKHRVHKVFKLTDRVLLSTDKLNHDRGPKRKFDRKWIGPFTIAAKVNDNAYRLLLPKSWRNNPVFNVDQLELYQENLVHRKKYDPHIEEDIDYYDNNPLGITDLIRTEHFGKQIKYLASVRTKYATESQYFTLEQLKDYKDLVWLLHNRSPTDPKPPHLDKFLNHLEGGS
SIO_010081: AWJ20_338
subclass of: SO_0000673
so part of: AWJ20_338
location: 1060633..1062288
location: region:1060633-1062288:1
so has part: feature:1060633-1062288:1:exon

XP_018734578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1060633-1062288:1:exon

AWJ20_339
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RPS18B
locus tag: AWJ20_339
so part of: sequence
location: <1065284..>1065661
location: region:1065284-1065661:1
so has part: feature:1065284-1065661:1:exon
subclass of: SO_0000010

30035406
type: Gene
SIO_000068: ncbigene

position:1065284:1
position: 1065284
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1065661:1
position: 1065661
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065284-1065661:1:exon

AWJ20_339
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RPS18B
locus tag: AWJ20_339
product: ribosomal 40S subunit protein S18B
transcript id: XM_018880399.1
SIO_010081: AWJ20_339
subclass of: SO_0000673
so part of: AWJ20_339
location: <1065284..>1065661
location: region:1065284-1065661:1
so has part: feature:1065284-1065661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1065284-1065661:1:exon

AWJ20_339
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RPS18B
locus tag: AWJ20_339
inference: similar to AA sequence:KEGG_Orthology:K02964
note: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S18 and bacterial S13; RPS18B has a paralog, RPS18A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IBA]; GO_component: GO:0022627 - cytosolic small ribosomal subunit [Evidence NAS] [PMID 9559554]; GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA,IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA,IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0019843 - rRNA binding [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence NAS] [PMID 9559554]; GO_process: GO:0002181 - cytoplasmic translation [Evidence NAS] [PMID 9559554]; GO_process: GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 14627813]; GO_process: GO:0006407 - rRNA export from nucleus [Evidence IGI] [PMID 16246728]; GO_process: GO:0006412 - translation [Evidence IEA]
codon start: 1
product: ribosomal 40S subunit protein S18B
translation: MYALTTIRGVGRRYANLICKKADVDLSKRAGELTVEELERIVTIIQNPTQYKVPAWFLNRQRDVVDGKDSHLLVNQLDNKLREDLERLKRMRAHRGLRHYWGLRVRGQHTKTTGRRGRSAPTGKK
SIO_010081: AWJ20_339
subclass of: SO_0000673
so part of: AWJ20_339
location: 1065284..1065661
location: region:1065284-1065661:1
so has part: feature:1065284-1065661:1:exon

XP_018734579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1065284-1065661:1:exon

AWJ20_340
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ADO1
locus tag: AWJ20_340
so part of: sequence
location: complement(<1068017..>1069060)
location: region:1068017-1069060:-1
so has part: feature:1068017-1069060:-1:exon
subclass of: SO_0000010

30035418
type: Gene
SIO_000068: ncbigene

position:1068017:-1
position: 1068017
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1069060:-1
position: 1069060
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068017-1069060:-1:exon

AWJ20_340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ADO1
locus tag: AWJ20_340
product: adenosine kinase
transcript id: XM_018880411.1
SIO_010081: AWJ20_340
subclass of: SO_0000673
so part of: AWJ20_340
location: complement(<1068017..>1069060)
location: region:1068017-1069060:-1
so has part: feature:1068017-1069060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068017-1069060:-1:exon

AWJ20_340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ADO1
locus tag: AWJ20_340
inference: similar to AA sequence:KEGG_Orthology:K00856
note: Adenosine kinase; required for the utilization of S-adenosylmethionine (AdoMet); may be involved in recycling adenosine produced through the methyl cycle; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0004001 - adenosine kinase activity [Evidence IEA,IEA]; GO_function: GO:0004001 - adenosine kinase activity [Evidence IDA,IMP] [PMID 11223943]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0044209 - AMP salvage [Evidence IEA]; GO_process: GO:0016310 - phosphorylation [Evidence IEA]; GO_process: GO:0006144 - purine nucleobase metabolic process [Evidence IMP] [PMID 11223943]; GO_process: GO:0006166 - purine ribonucleoside salvage [Evidence IEA,IEA]
codon start: 1
product: adenosine kinase
translation: MTFDLLALGNPLLDLQADVDAEYLAKYDLKANDAILIEDKHKPIFDEVMAQPKVHILAGGAAQNAARGAQYLLPANSVIYFGSVGQDKYAELLTKANDEAGVYSNYMVQKDIPTGKCAALITGNDRSLVTDLAAANHYKLDHLKAPENWKYVEEAKAFYVGGFHLTVCPPAINALGEHAAETNKIFSINLSAPFLPQFFKEPLDASSPYWDYLIGNESEALAYAESHGLDTKDITEIAKHIALLPKKNTKRDRVVVITQGLDDTIVVIGDVNNKTTTVHTFPVHPISSEDIVDSNGAGDAFAGGFLAGLVSGKPLAESVDMGQWLAAQSLREIGPSFPSPKKAYTSA
SIO_010081: AWJ20_340
subclass of: SO_0000673
so part of: AWJ20_340
location: complement(1068017..1069060)
location: region:1068017-1069060:-1
so has part: feature:1068017-1069060:-1:exon

XP_018734580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068017-1069060:-1:exon

AWJ20_341
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FMN1
locus tag: AWJ20_341
so part of: sequence
location: complement(<1072257..>1072868)
location: region:1072257-1072868:-1
so has part: feature:1072257-1072868:-1:exon
subclass of: SO_0000010

30035429
type: Gene
SIO_000068: ncbigene

position:1072257:-1
position: 1072257
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1072868:-1
position: 1072868
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072257-1072868:-1:exon

AWJ20_341
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FMN1
locus tag: AWJ20_341
product: riboflavin kinase
transcript id: XM_018880422.1
SIO_010081: AWJ20_341
subclass of: SO_0000673
so part of: AWJ20_341
location: complement(<1072257..>1072868)
location: region:1072257-1072868:-1
so has part: feature:1072257-1072868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072257-1072868:-1:exon

AWJ20_341
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FMN1
locus tag: AWJ20_341
inference: similar to AA sequence:KEGG_Orthology:K00861
note: Riboflavin kinase, produces riboflavin monophosphate (FMN); FMN is a necessary cofactor for many enzymes; predominantly localizes to the microsomal fraction and also found in the mitochondrial inner membrane; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA,IEA]; GO_component: GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA,IEA]; GO_component: GO:0043231 - intracellular membrane-bounded organelle [Evidence IDA] [PMID 10887197]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IDA] [PMID 10887197]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0003919 - FMN adenylyltransferase activity [Evidence IDA] [PMID 10887197]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0008531 - riboflavin kinase activity [Evidence IEA,IEA]; GO_function: GO:0008531 - riboflavin kinase activity [Evidence IDA,IMP] [PMID 10887197]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO_process: GO:0009398 - FMN biosynthetic process [Evidence IDA,IMP] [PMID 10887197]; GO_process: GO:0016310 - phosphorylation [Evidence IEA]; GO_process: GO:0009231 - riboflavin biosynthetic process [Evidence IEA]
codon start: 1
product: riboflavin kinase
translation: MTTSTATAMSRENRPQVVGPESPEPPYPLRVNTRVIAGYGRGSSDLGIPTANIPQDAFDALDIGDTGIYYGWASVHKSSQHPHTIETCPEGTDGTRKVEFSYGETLECGKDSDVVFPMVMSVGWNPFYGNKKRSAEIHIIHKFSDAFYGAAIKFMILGYIRPELNYVSKEALIADINTDIQVALNSLNRPGYASYRTDAFFSQ
SIO_010081: AWJ20_341
subclass of: SO_0000673
so part of: AWJ20_341
location: complement(1072257..1072868)
location: region:1072257-1072868:-1
so has part: feature:1072257-1072868:-1:exon

XP_018734581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1072257-1072868:-1:exon

AWJ20_342
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GLE1
locus tag: AWJ20_342
so part of: sequence
location: complement(<1075092..>1077197)
location: region:1075092-1077197:-1
so has part: feature:1075092-1077197:-1:exon
subclass of: SO_0000010

30035440
type: Gene
SIO_000068: ncbigene

position:1075092:-1
position: 1075092
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1077197:-1
position: 1077197
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075092-1077197:-1:exon

AWJ20_342
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GLE1
locus tag: AWJ20_342
product: nucleoporin GLE1
transcript id: XM_018880433.1
SIO_010081: AWJ20_342
subclass of: SO_0000673
so part of: AWJ20_342
location: complement(<1075092..>1077197)
location: region:1075092-1077197:-1
so has part: feature:1075092-1077197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1075092-1077197:-1:exon

AWJ20_342
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GLE1
locus tag: AWJ20_342
inference: similar to AA sequence:KEGG_Orthology:K18723
codon start: 1
product: nucleoporin GLE1
translation: MRFTPHRSSSYSDSDVDSLWSQDSEEEEFPVGPRDGDSEDDDEFIEVTYEDALGQEAGGEDATSDWSEDESFRLFTEQRSELLKDLEKSSLPTGVSGLHDQKKLNTATFTSSSPGDSFLNRSATGSMSMNIPLKTQTQQPSQLSFQRNTSTPLKTPGQNQRSTTPAATKSFPHVGSVTSDSGNRSFSNKGAISSPVNGSASASRYQTTVLDSDRSFGSEVNISPSLRRTSRIMNQMQVTADINKLDAMVNKWSISNIEKYADLVKDDEQTIQDKLDQLTDQFNLQIISTNENANNIVARRKKRVSDLINERIRYEEEIKEQKRREAEAEKERLRKQQEEQARIQRELEEARKKQEEERKKQEAIDVANAEARKEAEKKAAEEAKAKAAAEAAAAKAAAEEAAKSRQYTDWTKVDKEFAQRKAKIVEIKEKILAPVSADANLRKYCFQNKRHIKVKLGQLTDSRGQLQTILRELFDVFEQAKKFNHLTYLWLLNFFAKGVVAQAETETIVAVQSAVPLGTLATFCMAQFPELVDLLLARFVKKCPQVIGYSCNIDTEEGRIRMGYKRKNEKWEDDAVYSERVSGMCSVWTVITMTEQLKGTPFNHPYPFSNTWRFLARQLNKDPELVQNGDFAAVAAWWDIASERFVQVYGRQAIKALQLASGPWAMLKPDQRFPAALRLQLLGEEWRKKGKLSVVVKPMLP
SIO_010081: AWJ20_342
subclass of: SO_0000673
so part of: AWJ20_342
location: complement(1075092..1077197)
location: region:1075092-1077197:-1
so has part: feature:1075092-1077197:-1:exon

XP_018734582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075092-1077197:-1:exon

AWJ20_343
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MRPL7
locus tag: AWJ20_343
so part of: sequence
location: <1078066..>1078944
location: region:1078066-1078944:1
so has part: feature:1078066-1078944:1:exon
subclass of: SO_0000010

30035451
type: Gene
SIO_000068: ncbigene

position:1078066:1
position: 1078066
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1078944:1
position: 1078944
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078066-1078944:1:exon

AWJ20_343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MRPL7
locus tag: AWJ20_343
product: mitochondrial 54S ribosomal protein YmL7/YmL5
transcript id: XM_018880444.1
SIO_010081: AWJ20_343
subclass of: SO_0000673
so part of: AWJ20_343
location: <1078066..>1078944
location: region:1078066-1078944:1
so has part: feature:1078066-1078944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078066-1078944:1:exon

AWJ20_343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MRPL7
locus tag: AWJ20_343
inference: similar to AA sequence:KEGG_Orthology:K02931
note: Mitochondrial ribosomal protein of the large subunit; MRPL7 produces both YmL5 and YmL7, which are two different modified forms of the same protein; GO_component: GO:0005762 - mitochondrial large ribosomal subunit [Evidence IDA] [PMID 9151978]; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA,IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IDA] [PMID 9151978]; GO_process: GO:0032543 - mitochondrial translation [Evidence IC] [PMID 9151978]; GO_process: GO:0006412 - translation [Evidence IEA]
codon start: 1
product: mitochondrial 54S ribosomal protein YmL7/YmL5
translation: MFKRAFHTTVPTAGKPGVSIVHPVHHTVKFKKAQVSERYRELLTPKSSILSAGFRPLVVSPDRVRDHHYNTIQSDLLLINYMHGAEDKKGIKMREWDGSSPYHLNRAPRPPRGRSRATKDIKVRDWSNVPEIVGVSLNCFVPEAKEVSDIAVAAKLQLQQITGVKARTVYSRSNVPTWRLRPGMAMGAKVHLVGRPMNQFLYTLTEIVLPRSKTFTGVSNSAGDTTGNITVGISADDARSFPEIEGNIEQWATTFGFDITIHTTAQVDPDARTLLSAYGFLFKGEEKFPSRM
SIO_010081: AWJ20_343
subclass of: SO_0000673
so part of: AWJ20_343
location: 1078066..1078944
location: region:1078066-1078944:1
so has part: feature:1078066-1078944:1:exon

XP_018734583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078066-1078944:1:exon

AWJ20_344
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SEC26
locus tag: AWJ20_344
so part of: sequence
location: complement(<1079060..>1081912)
location: region:1079060-1081912:-1
so has part: feature:1079060-1081912:-1:exon
subclass of: SO_0000010

30035462
type: Gene
SIO_000068: ncbigene

position:1079060:-1
position: 1079060
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1081912:-1
position: 1081912
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079060-1081912:-1:exon

AWJ20_344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SEC26
locus tag: AWJ20_344
product: Sec26p
transcript id: XM_018880455.1
SIO_010081: AWJ20_344
subclass of: SO_0000673
so part of: AWJ20_344
location: complement(<1079060..>1081912)
location: region:1079060-1081912:-1
so has part: feature:1079060-1081912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079060-1081912:-1:exon

AWJ20_344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SEC26
locus tag: AWJ20_344
inference: similar to AA sequence:KEGG_Orthology:K17301
note: Essential beta-coat protein of the COPI coatomer; involved in ER-to-Golgi protein trafficking and maintenance of normal ER morphology; shares 43% sequence identity with mammalian beta-coat protein (beta-COP); GO_component: GO:0030126 - COPI vesicle coat [Evidence IEA]; GO_component: GO:0030126 - COPI vesicle coat [Evidence IGI,ISS] [PMID 7929113]; GO_component: GO:0030663 - COPI-coated vesicle membrane [Evidence IEA]; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA]; GO_component: GO:0000139 - Golgi membrane [Evidence IEA]; GO_component: GO:0030135 - coated vesicle [Evidence ISS] [PMID 7929113]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0031410 - cytoplasmic vesicle [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0030117 - membrane coat [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0005198 - structural molecule activity [Evidence IEA]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IMP] [PMID 7929113]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA,IEA]
codon start: 1
product: Sec26p
translation: MNLLEKGSDEKKIDAMKRILTIMLNGDPMPQLLMQIIRFVMPSRNKQLKKLLHFYWEICPKLGADGKLKQEMILVCNAIRNDLQHPNEYIRGATLRFLCKLREPDLLEPLIPSIRACLDHRHAYVRKNAVFTVYSIASHSADHLIPDATELIKIFLDNETDATCKRNAFIALSNLSRDDAFEFVQKNHTNISGLEELLQLAFIEFIRKDAQTHPELKNSYIKIIGEILESSSNTVVYDAANALTSLTSNASAIKTAASKFIDLAVKESDNNIKLIVLSIVDKLRIKNPGVLNDLTMDILLVLSSPDLDVRRKALELALSMVTSKNVDDVVRLFKKDLAKTVNNSGDFDKNTEYRQLLIQSIHTCAVKFGEVATSVVDLLLDFIGDFNSSSAVDVIAFVKEVVELYPKLRKSIVKRLLTTLNSDEVRSGSVYRGALWILGEYCLEETDIHDSWVHIRKSLGEIPILSTERNKLNGGNDGEEAADNAESGATTNGGTTHKKGPKVLADGTYASESAFTATDAKNLEKVKSSRPPLRALILDGNYFVAAVLAVTITKLVLRFNKVSNNDSHKNALRAEALLILTSILRVGESEIVSQKIDEDSADRVYSCIQALLDTNDAIDLAFLQDSHSAFKVLIDKQKKKQDEKNANEREKTATRVDSPVKFRQFARLEANNVSSENADASDEAALSAANDASSDKIASRLNRIVQLTGFSDPVYAEAYVIVHQFDIVLDVLLFNQTTETLQNLSVEFATLGDLKVVERPTTQNVGPQSFHSVQTTIKVSSADAGVIFGNIIYEGHTGSVNNVVIINDIHVDIMDYIKPGHCSETEFRTMWSEFEWENKVNISVTYPSLRGFLAYLLKNTNMTCLTTGALSDETDADGNYKDECQFLSANLHARSSFGEDALANLSIEKDASGKVTGHVRIRSKGQGLALSLGDRVAELQRKIKPSPLSK
SIO_010081: AWJ20_344
subclass of: SO_0000673
so part of: AWJ20_344
location: complement(1079060..1081912)
location: region:1079060-1081912:-1
so has part: feature:1079060-1081912:-1:exon

XP_018734584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1079060-1081912:-1:exon

AWJ20_345
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: LUC7
locus tag: AWJ20_345
so part of: sequence
location: complement(<1083658..>1084407)
location: region:1083658-1084407:-1
so has part: feature:1083658-1084407:-1:exon
subclass of: SO_0000010

30035473
type: Gene
SIO_000068: ncbigene

position:1083658:-1
position: 1083658
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1084407:-1
position: 1084407
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083658-1084407:-1:exon

AWJ20_345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: LUC7
locus tag: AWJ20_345
product: Luc7p
transcript id: XM_018880466.1
SIO_010081: AWJ20_345
subclass of: SO_0000673
so part of: AWJ20_345
location: complement(<1083658..>1084407)
location: region:1083658-1084407:-1
so has part: feature:1083658-1084407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083658-1084407:-1:exon

AWJ20_345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: LUC7
locus tag: AWJ20_345
note: Essential protein associated with the U1 snRNP complex; splicing factor involved in recognition of 5' splice site; contains two zinc finger motifs; N-terminal zinc finger binds pre-mRNA; relocalizes to the cytosol in response to hypoxia; GO_component: GO:0005685 - U1 snRNP [Evidence IEA]; GO_component: GO:0005685 - U1 snRNP [Evidence IGI,IMP] [PMID 10500099]; GO_component: GO:0071004 - U2-type prespliceosome [Evidence IDA] [PMID 16618970]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 22932476]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22932476]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO_component: GO:0005681 - spliceosomal complex [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA,IMP] [PMID 17726058]; GO_process: GO:0008380 - RNA splicing [Evidence IEA]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]; GO_process: GO:0006376 - mRNA splice site selection [Evidence IEA]; GO_process: GO:0006376 - mRNA splice site selection [Evidence IGI,IMP] [PMID 10500099]
codon start: 1
product: Luc7p
translation: MAAEQRKLLEQLMGRDALDSRRPVRAERIDLYDPKICKSFLLGGCFYDFFPGVKQIGRCPRMHAEKYRLEYLNQVKNGVKFPDFDLEHERTLEHHINELQQRIDVANKRLDKTPEDMEKINQATRDLETLTTAITMSLQEIELLAEQGHITKALQELNNLERLRMEKNNINTEIKALSDVSGFSGFQKLQVCEICSAYLSRLDNDKRLADHFLGKTHRGYALLLDTYNEYKTKNAPLHASSRKRGYSHY
SIO_010081: AWJ20_345
subclass of: SO_0000673
so part of: AWJ20_345
location: complement(1083658..1084407)
location: region:1083658-1084407:-1
so has part: feature:1083658-1084407:-1:exon

XP_018734585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1083658-1084407:-1:exon

AWJ20_346
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SWP1
locus tag: AWJ20_346
so part of: sequence
location: <1085508..>1086065
location: region:1085508-1086065:1
so has part: feature:1085508-1086065:1:exon
subclass of: SO_0000010

30035484
type: Gene
SIO_000068: ncbigene

position:1085508:1
position: 1085508
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1086065:1
position: 1086065
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085508-1086065:1:exon

AWJ20_346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SWP1
locus tag: AWJ20_346
product: Swp1p
transcript id: XM_018880477.1
SIO_010081: AWJ20_346
subclass of: SO_0000673
so part of: AWJ20_346
location: <1085508..>1086065
location: region:1085508-1086065:1
so has part: feature:1085508-1086065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085508-1086065:1:exon

AWJ20_346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SWP1
locus tag: AWJ20_346
inference: similar to AA sequence:KEGG_Orthology:K12667
note: Delta subunit of the oligosaccharyl transferase glycoprotein complex; complex is required for N-linked glycosylation of proteins in the endoplasmic reticulum; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0008250 - oligosaccharyltransferase complex [Evidence IEA]; GO_component: GO:0008250 - oligosaccharyltransferase complex [Evidence IPI] [PMID 10358084]; GO_component: GO:0008250 - oligosaccharyltransferase complex [Evidence IPI] [PMID 16297388]; GO_component: GO:0008250 - oligosaccharyltransferase complex [Evidence IPI] [PMID 9405463]; GO_function: GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity [Evidence IMP] [PMID 9405463]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO_process: GO:0006487 - protein N-linked glycosylation [Evidence IEA]; GO_process: GO:0006487 - protein N-linked glycosylation [Evidence IPI] [PMID 9405463]; GO_process: GO:0006486 - protein glycosylation [Evidence IEA]
codon start: 1
product: Swp1p
translation: MFTGSVRPNGKADISIAHKSVPLALQGKKLKLTVLVGSFGSDKPVAVEVTDSFIVAQTQQLTEPARLKALPELHHTFRAPPKTVAKPIALAFVGIVTSLLVILLGFWLGTADLAALGSAVSKAPLGHIGLLSSLLAFELVFVRYFQGTSIFDTLFAVAFIAPVAIFTGSRALREVRERRLNGQFN
SIO_010081: AWJ20_346
subclass of: SO_0000673
so part of: AWJ20_346
location: 1085508..1086065
location: region:1085508-1086065:1
so has part: feature:1085508-1086065:1:exon

XP_018734586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1085508-1086065:1:exon

AWJ20_347
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_347
so part of: sequence
location: complement(<1086329..>1088482)
location: region:1086329-1088482:-1
so has part: feature:1086329-1088482:-1:exon
subclass of: SO_0000010

30035495
type: Gene
SIO_000068: ncbigene

position:1086329:-1
position: 1086329
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1088482:-1
position: 1088482
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1086329-1088482:-1:exon

AWJ20_347
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_347
product: hypothetical protein
transcript id: XM_018880488.1
SIO_010081: AWJ20_347
subclass of: SO_0000673
so part of: AWJ20_347
location: complement(<1086329..>1088482)
location: region:1086329-1088482:-1
so has part: feature:1086329-1088482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1086329-1088482:-1:exon

AWJ20_347
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_347
codon start: 1
product: hypothetical protein
translation: MNGYFNGKRISLGPPEDAHSGDGDSSSPGISPVPSPVPGNMNSSIPGAFPMGRSIPPIPPPHAGPPKRKPVRRIPVSVDSHPGGVAAGSGTGPITATQRNSMYEGLAPSRSSGSNNSSNSAYQTSFTAASTRPLSGPPGSVPLPPGPIPYLDQGVSDNISPKTSSSNLSNAPSPAFRSYSPSPSFYNSEENNYSNERISGTVASASASTTGPATATTTAGTVHRYQAQPQVLEGSATALYQSPSQMYAQTQARLQSQQNQNQSQNQHPQQQYHQQQQPGQGFNQGQAIYQSHPTSQSQDYQAYQTQSPSNLQYNYTNPDHSSGPSSPEYVQATAESVPQPPIPHSSANAYPYSYPYPSQSQSKPSLTQQLPPVLVPTNNAYDSDNTSPVSRSSQQFSHRRSGSTHSASSGASFSQPLYISASSNSAAAAAAAVVAANQGTGGMLRNNAANFANPYSSQTSLQQSISNHSRGNSISSRVSNNGTSTGTSNTTNTISPAVSSATRSATTASSTSGGGASAASAAPVKQEIPGLGVVSAYVRQLRVNSASAWSDKPASVWGLPIGISTNANGSALYKPTPTYAKSLLRRTVDPRHSHLTPRLLASEIDDEDDDMPMVRSQASSQTLGHSPQPSNATSDSILTATGTSTTPSSGSGSGPASSSYKYNPSLAQQHEESASIKSSDANTPYGGLSRAQSVSSTKSVEEDIGKIRLFVANPDDS
SIO_010081: AWJ20_347
subclass of: SO_0000673
so part of: AWJ20_347
location: complement(1086329..1088482)
location: region:1086329-1088482:-1
so has part: feature:1086329-1088482:-1:exon

XP_018734587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1086329-1088482:-1:exon

AWJ20_348
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: LYS4
locus tag: AWJ20_348
so part of: sequence
location: complement(<1093402..>1095510)
location: region:1093402-1095510:-1
so has part: feature:1093402-1095510:-1:exon
subclass of: SO_0000010

30035506
type: Gene
SIO_000068: ncbigene

position:1093402:-1
position: 1093402
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1095510:-1
position: 1095510
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093402-1095510:-1:exon

AWJ20_348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: LYS4
locus tag: AWJ20_348
product: homoaconitate hydratase LYS4
transcript id: XM_018880499.1
SIO_010081: AWJ20_348
subclass of: SO_0000673
so part of: AWJ20_348
location: complement(<1093402..>1095510)
location: region:1093402-1095510:-1
so has part: feature:1093402-1095510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1093402-1095510:-1:exon

AWJ20_348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: LYS4
locus tag: AWJ20_348
inference: similar to AA sequence:KEGG_Orthology:K01705
note: Homoaconitase; catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lysine biosynthesis pathway; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO_function: GO:0004409 - homoaconitate hydratase activity [Evidence IEA,IEA]; GO_function: GO:0004409 - homoaconitate hydratase activity [Evidence ISA] [PMID 9268014]; GO_function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_process: GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]; GO_process: GO:0009085 - lysine biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]; GO_process: GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IMP] [PMID 2507177]; GO_process: GO:0008152 - metabolic process [Evidence IEA]
codon start: 1
product: homoaconitate hydratase LYS4
translation: MLRLAQSLNGKTQSRNWGRLFSTSRFVSAQTLTEKIVQKYAVGIAPGKEVRSGDYVSIRPSHCMSHDNSWPVALKFKGLGASKVADNRQVVCTLDHDVQNKSDKNLEKYRNIENFAKEQGVDFYPAGRGIGHQILVEEGYAFPYNLTVASDSHSNTYGGVGCLGTPIVRTDAASIWATGMTWWQIPPVARVELKGQLQPGVTGKDVIVALCGVFNNDEVLNHAIEFVGEGVDKLSVDERLTIANMTTEWGALSGLFPVDQVLIDWYEDRLKNYIKKDNHPRISRASIDNVKNNVITADGDAKFAKYLTLDLSTLSPYVSGPNSVKVATPLSELSSQDIKINKAYLVSCTNSRLSDIVAAAKVIKGRKVKEGVEFYVAAASSIVQKDAEQIGAWNDLLEAGAKPLPAGCGPCIGLGTGLLKDGEVGISATNRNFKGRMGSRDALAYLASPEVVAASAVLGKIGFPEEMDGKTPQAAQGIKSTISDPSEVGETTDGGAAGVEATGSTATVSILPGFPESIQGELVLCDADNINTDAIYPGKYTYQDDVPREKMAEVCMENYDSDFGSKTKAGDIIVSGFNFGTGSSREQAATAILARDIKLVIAGSFGNIFSRNSINNALLTLEIPALIKLLRERFAEQKQSELTIRTGLFAQWDVKTATVTVRDGSTTGPVLLTSKVGELGESMQEIIVKGGLEGWVRSKIAN
SIO_010081: AWJ20_348
subclass of: SO_0000673
so part of: AWJ20_348
location: complement(1093402..1095510)
location: region:1093402-1095510:-1
so has part: feature:1093402-1095510:-1:exon

XP_018734588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1093402-1095510:-1:exon

AWJ20_349
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PRP22
locus tag: AWJ20_349
so part of: sequence
location: <1098352..>1100556
location: region:1098352-1100556:1
so has part: feature:1098352-1100556:1:exon
subclass of: SO_0000010

30035517
type: Gene
SIO_000068: ncbigene

position:1098352:1
position: 1098352
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1100556:1
position: 1100556
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098352-1100556:1:exon

AWJ20_349
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PRP22
locus tag: AWJ20_349
product: DEAH-box ATP-dependent RNA helicase PRP22
transcript id: XM_018880510.1
SIO_010081: AWJ20_349
subclass of: SO_0000673
so part of: AWJ20_349
location: <1098352..>1100556
location: region:1098352-1100556:1
so has part: feature:1098352-1100556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098352-1100556:1:exon

AWJ20_349
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PRP22
locus tag: AWJ20_349
inference: similar to AA sequence:KEGG_Orthology:K13117
note: DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase; associates with lariat intermediates before the second catalytic step of splicing; mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes; required for proofreading the exon ligation reaction; GO_component: GO:0071007 - U2-type catalytic step 2 spliceosome [Evidence IMP] [PMID 9524130]; GO_component: GO:0071021 - U2-type post-spliceosomal complex [Evidence IMP] [PMID 12212850]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004004 - ATP-dependent RNA helicase activity [Evidence IDA] [PMID 9582286]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA,IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0000386 - second spliceosomal transesterification activity [Evidence IDA] [PMID 12212850]; GO_function: GO:0000386 - second spliceosomal transesterification activity [Evidence IMP] [PMID 9524130]; GO_process: GO:0006200 - ATP catabolic process [Evidence IEA]; GO_process: GO:0008380 - RNA splicing [Evidence IEA]; GO_process: GO:0000350 - generation of catalytic spliceosome for second transesterification step [Evidence IDA] [PMID 12212850]; GO_process: GO:0000350 - generation of catalytic spliceosome for second transesterification step [Evidence IMP] [PMID 22408182]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]; GO_process: GO:0000390 - spliceosomal complex disassembly [Evidence IMP] [PMID 9524130]
codon start: 1
product: DEAH-box ATP-dependent RNA helicase PRP22
translation: MVSRGVPPAAGALPQTPLLLLRRRICLDCGEGGGSILTEVEQVIRKSSAVSPSHVSIVVASSLSGVYTEVPQYLYQELTDGKILAVVVEDPERSANRLVSAIATESHSVTPDARLERSERSRGVWGAAPAAGGRQPTQLEAGSVGYTSLFSDFVGAQTRVKYVTAEMLLREALVDPLLRSYGIVYVEDFHERAAWTDILLGVTKKVLKVRPDDLRVVVHSVTDDVVELLRRFFSPGEDEKTRPFVVQVKEGEEKSSLVNHVDVLYSTQSYGDYVKAAVDTVTSLYSGESRRLVETATVVVFLASKGDVSRASQLLKYHSGLPQGIGIATEVETLDMKDLSQGGLIVLTCENGAETNFKMLSCGTVQFVVDCGYRGYKWFQGASDGRGNADINDTVNFPVAKSQAELRKLLASHADGPGKCFRLYTEAAAFNVLTDGYIPQIQGSSQLPEIILRLKALGIDNIARSFPFLTAPSVDVISRTLSLLWWHKIIDDYGKLTAMGEKLALLPLDIRLGRAVYLAAQTGCLSEMITIAAMVAVGGLSAVLMKSEQAMADHKQFYTVEGDYLTLLNIYALYISTRKRDGVSFINKWAKNHGIHGDVLEGARNIRSQLQTAVNRTGLRQLDTTGKSTSSAPSNPSELANTISNCITQAFFLQVAKRISHNTYELVGPHSNSSSTALPDTFCVYSDLTKPLTSPWVVYEKLTQGTDGNIYLTGVNMADRATLELTNYYKSIRR
SIO_010081: AWJ20_349
subclass of: SO_0000673
so part of: AWJ20_349
location: 1098352..1100556
location: region:1098352-1100556:1
so has part: feature:1098352-1100556:1:exon

XP_018734589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1098352-1100556:1:exon

AWJ20_350
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SUI1
locus tag: AWJ20_350
so part of: sequence
location: <1101974..>1102306
location: region:1101974-1102306:1
so has part: feature:1101974-1102306:1:exon
subclass of: SO_0000010

30035529
type: Gene
SIO_000068: ncbigene

position:1101974:1
position: 1101974
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1102306:1
position: 1102306
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101974-1102306:1:exon

AWJ20_350
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SUI1
locus tag: AWJ20_350
product: translation initiation factor eIF1
transcript id: XM_018880522.1
SIO_010081: AWJ20_350
subclass of: SO_0000673
so part of: AWJ20_350
location: <1101974..>1102306
location: region:1101974-1102306:1
so has part: feature:1101974-1102306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1101974-1102306:1:exon

AWJ20_350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SUI1
locus tag: AWJ20_350
inference: similar to AA sequence:KEGG_Orthology:K03113
note: Translation initiation factor eIF1; component of a complex involved in recognition of the initiator codon; modulates translation accuracy at the initiation phase; GO_component: GO:0016282 - eukaryotic 43S preinitiation complex [Evidence IDA] [PMID 12008673]; GO_component: GO:0043614 - multi-eIF complex [Evidence IDA] [PMID 11018020]; GO_component: GO:0043614 - multi-eIF complex [Evidence IDA] [PMID 15838098]; GO_function: GO:0043024 - ribosomal small subunit binding [Evidence IDA] [PMID 17434125]; GO_function: GO:0003743 - translation initiation factor activity [Evidence IEA]; GO_function: GO:0003743 - translation initiation factor activity [Evidence IDA] [PMID 12008673]; GO_function: GO:0031369 - translation initiation factor binding [Evidence IDA,IPI] [PMID 12861028]; GO_function: GO:0031369 - translation initiation factor binding [Evidence IDA,IPI] [PMID 15145951]; GO_function: GO:0031369 - translation initiation factor binding [Evidence IPI] [PMID 22851688]; GO_process: GO:0001731 - formation of translation preinitiation complex [Evidence IDA] [PMID 12008673]; GO_process: GO:0001731 - formation of translation preinitiation complex [Evidence IDA] [PMID 15664195]; GO_process: GO:0001731 - formation of translation preinitiation complex [Evidence IDA] [PMID 17434125]; GO_process: GO:1990145 - maintenance of translational fidelity [Evidence IMP] [PMID 9488467]; GO_process: GO:0006417 - regulation of translation [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006413 - translational initiation [Evidence IEA]
codon start: 1
product: translation initiation factor eIF1
translation: MSTSIENLKSFDPFADTGDDDTQSTNYIHIRCQQRNGRKTITTVQGVPAEYDLKRILKTLKKDFGCNGHINKDEELGDILQLQGDQRGKVMEFLTSALQIDKKTIQVHGF
SIO_010081: AWJ20_350
subclass of: SO_0000673
so part of: AWJ20_350
location: 1101974..1102306
location: region:1101974-1102306:1
so has part: feature:1101974-1102306:1:exon

XP_018734590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1101974-1102306:1:exon

AWJ20_351
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NVJ2
locus tag: AWJ20_351
so part of: sequence
location: complement(<1102853..>1105813)
location: region:1102853-1105813:-1
so has part: feature:1102853-1105813:-1:exon
subclass of: SO_0000010

30035540
type: Gene
SIO_000068: ncbigene

position:1102853:-1
position: 1102853
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1105813:-1
position: 1105813
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102853-1105813:-1:exon

AWJ20_351
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NVJ2
locus tag: AWJ20_351
product: Nvj2p
transcript id: XM_018880533.1
SIO_010081: AWJ20_351
subclass of: SO_0000673
so part of: AWJ20_351
location: complement(<1102853..>1105813)
location: region:1102853-1105813:-1
so has part: feature:1102853-1105813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102853-1105813:-1:exon

AWJ20_351
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NVJ2
locus tag: AWJ20_351
note: Lipid-binding ER protein, enriched at nucleus-vacuolar junctions (NVJ); may be involved in sterol metabolism or signaling at the NVJ; contains a synaptotagmin-like-mitochondrial- lipid binding protein (SMP) domain; binds phosphatidylinositols and other lipids in a large-scale study; may interact with ribosomes, based on co-purification experiments; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 14562095]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0071561 - nucleus-vacuole junction [Evidence IDA] [PMID 22250200]; GO_component: GO:0005840 - ribosome [Evidence IDA] [PMID 16702403]; GO_function: GO:0008289 - lipid binding [Evidence IDA] [PMID 22250200]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Nvj2p
translation: MRLYDPSVMAVPFKLNNDGFSKVFFNSDIPGDSSAQWFNALTGRLFLAIKDTARLETYFRNKIINKLARVKKPGFLSEIDVQKIDCGNSVPFISNPKLGTFNQEGEVSMTANVKYNGGFSIIIGTKANLNVMKIKQSFSLVLGLKVTKLEGSIKLLIKPPPSNRIWYGFESVPQLEFETEPQLRFRNKNFAYNYVASIIESKIRDLIKESLVLPAMDDMTFFPSEDDFYRGGIWDYSKLKDISANDKQQTDESAGQEVEDDLDSRERVSGLGRSKTVPVLSVSSATELIEGEENLRHRTARSHTAVAGTTASSIDDSDVVSELDLDTGVLRGRANSLNPSISSTDSEYNPAEHIGELKGFGYSPDGKIQPQAMLSSAASTNTAGSSQKDTLGGAGLATKKFLTKTWNSWYSKDKQGTTSTGSTSNGTGIGSNGDVIGSNGSDNSLGKNSPKPQVIKQAPAPHEFPREFLSSIENNNSSNPYGPAPEMRLPATYPVPQAQMRADYQELAKKTPKRKPVGGSSSKDSASENGKATTDEKETEAGTDEMGQEEGQQSERSRRDSFGRRLSLRISRSRSRSRSRSRSRSRSESKESISFGNDYDHDDSFDNEDHSGSHSSDKPRKSLSDSISTLKDINTSRNSNYSNNNNSSSSDINRPVQSPTFGPRSPTTPFSYPSSPRVVVSSASSLQRTGSAVSVTSSSSDMSTGTGYSESMSSRRMSSVAVKLNENRPNVNSGTNGAASSLPGPGDAITFHPSPPTTTTTTVSAITSNSSTTSSPHMGSSSPRLQDYSMPILQPTAIMTTGTTTATSTSSATSTSTSTSTSTAGNISTSTSTSTTDNTTGTNTATTTSAGLINSNGSSSFDTISDSRPSSPARRSNTVKRKAVGSGTSSTTATSNNSVPPLPSSAIPPLPPRTLPTTATTNTTTTAMPPLPPRDLTLTTAVSSSAPPPPPLPPRTDSAQSTSSTASSSSSDEVTLTVLKSESLPT
SIO_010081: AWJ20_351
subclass of: SO_0000673
so part of: AWJ20_351
location: complement(1102853..1105813)
location: region:1102853-1105813:-1
so has part: feature:1102853-1105813:-1:exon

XP_018734591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102853-1105813:-1:exon

AWJ20_352
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_352
so part of: sequence
location: <1109925..>1110024
location: region:1109925-1110024:1
so has part: feature:1109925-1110024:1:exon
subclass of: SO_0000663

30035551
type: Gene
SIO_000068: ncbigene

position:1109925:1
position: 1109925
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1110024:1
position: 1110024
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109925-1110024:1:exon

AWJ20_352
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 796027
locus tag: AWJ20_352
product: tRNA-Leu
SIO_010081: AWJ20_352
subclass of: SO_0000673
so part of: AWJ20_352
location: <1109925..>1110024
location: region:1109925-1110024:1
so has part: feature:1109925-1110024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109925-1110024:1:exon

AWJ20_353
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: AGP2
locus tag: AWJ20_353
so part of: sequence
location: complement(<1116191..>1117870)
location: region:1116191-1117870:-1
so has part: feature:1116191-1117870:-1:exon
subclass of: SO_0000010

30035562
type: Gene
SIO_000068: ncbigene

position:1116191:-1
position: 1116191
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1117870:-1
position: 1117870
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116191-1117870:-1:exon

AWJ20_353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: AGP2
locus tag: AWJ20_353
product: Agp2p
transcript id: XM_018880554.1
SIO_010081: AWJ20_353
subclass of: SO_0000673
so part of: AWJ20_353
location: complement(<1116191..>1117870)
location: region:1116191-1117870:-1
so has part: feature:1116191-1117870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1116191-1117870:-1:exon

AWJ20_353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: AGP2
locus tag: AWJ20_353
inference: similar to AA sequence:KEGG_Orthology:K16261
note: Plasma membrane regulator of polyamine and carnitine transport; has similarity to transporters but lacks transport activity; may act as a sensor that transduces environmental signals; has a positive or negative regulatory effect on transcription of many transporter genes; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IDA] [PMID 10545096]; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IDA] [PMID 10545096]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0005887 - integral component of plasma membrane [Evidence IDA] [PMID 10545096]; GO_component: GO:0016020 - membrane [Evidence IEA,IEA,IEA]; GO_function: GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0015203 - polyamine transmembrane transporter activity [Evidence IMP] [PMID 23755272]; GO_process: GO:0003333 - amino acid transmembrane transport [Evidence IEA]; GO_process: GO:0006865 - amino acid transport [Evidence IEA,IEA]; GO_process: GO:1902274 - positive regulation of (R)-carnitine transmembrane transport [Evidence IMP] [PMID 23755272]; GO_process: GO:1902269 - positive regulation of polyamine transmembrane transport [Evidence IMP] [PMID 23755272]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA,IEA]
codon start: 1
product: Agp2p
translation: MIASEEKSVGVTTAIDQGPSGSQLEETLPGYPESISSETPPPSYHSTHRKLKSRHIQLIGIGGTIGTVLFVQLGSALSKGGPGSLFLAFFIWCFPILCITNSTAEMVTYLPLPSPFIRLAGRCVDPALEVMAGWNFFILEATLVPFEITAVNIIIHFWADGFSPAIPIVVQIFLYVLINFFAVRYYGESEFWLSFGKVLLAVGLIVFTFVTMVGGNPKHDAYGFRYWQNPGAFAEYQETGSLGRFLGFFTCLVQACYTISGPEYVSMAAGEAENPRGVMPRAYRGVIVRLVCFFVFGALSMGIVCPYNDPELLTAINTGAPGAAASPYIIAMQRLGIPVLPHIVNVLVLTASFSAGNSYVYCASRSLYGMALDGHAPKIFSKCTKNGVPIYAVTVVLAFGLLSFLQLGNTAETVLNWIVNISTASELINFAIMSLTYLRFYYAMKAQNMSRDNLPYKGPFQPYCGYIGLICAGVMTFLSGYSVFVHGYWSLSTFICSYIMIAVDLVIYVSWKLVKRTKIRSATEIDLLSDVKEIEDYTSSFVDEPPKTLLGRISRALIG
SIO_010081: AWJ20_353
subclass of: SO_0000673
so part of: AWJ20_353
location: complement(1116191..1117870)
location: region:1116191-1117870:-1
so has part: feature:1116191-1117870:-1:exon

XP_018734592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1116191-1117870:-1:exon

AWJ20_354
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ETP1
locus tag: AWJ20_354
so part of: sequence
location: <1129517..>1131691
location: region:1129517-1131691:1
so has part: feature:1129517-1131691:1:exon
subclass of: SO_0000010

30035573
type: Gene
SIO_000068: ncbigene

position:1129517:1
position: 1129517
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1131691:1
position: 1131691
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129517-1131691:1:exon

AWJ20_354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ETP1
locus tag: AWJ20_354
product: Etp1p
transcript id: XM_018880565.1
SIO_010081: AWJ20_354
subclass of: SO_0000673
so part of: AWJ20_354
location: <1129517..>1131691
location: region:1129517-1131691:1
so has part: feature:1129517-1131691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1129517-1131691:1:exon

AWJ20_354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ETP1
locus tag: AWJ20_354
inference: similar to AA sequence:KEGG_Orthology:K10632
note: hypothetical protein required for growth on ethanol; contains a zinc finger region and has homology to human BRAP2, which is a cytoplasmic protein that binds nuclear localization sequences; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0008139 - nuclear localization sequence binding [Evidence IDA] [PMID 9497340]; GO_function: GO:0043130 - ubiquitin binding [Evidence IDA] [PMID 16564012]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0045471 - response to ethanol [Evidence IMP] [PMID 19416103]
codon start: 1
product: Etp1p
translation: MVRYHIIVETDSSVDKEKNSGRIEESFQTESSGFGVKYCSWSSAAKSVGDIFLPVENWERDSSLGGQKEKERRFSEVASKVSEGRISRPGEGRLRATSLSQQQLVTGESAGNANPASGISLGPGNFLSRRRRSTLSGEARPVDPAIHIARTRKDQSGPKPGSKEYYSIHTSRDYRFGRVEIQGFDNEMASASVTSTTVAEVAQVAQVAGSSSVNDDLVPVPEAKTTATLKSTFMGYGVVRLYREQDEGEEETADTDDATVVAILAVPGYMSTGDLLEYLGEDTRKRSSHIRLVTSNGVPNRYMVLIKFLDAKFATDFYLNYNGKVFNSMEAETCHVVYVKSVQFRSPPRRGDGDEIPYLIKDPFTGIGIGAETDDKTATESSATAVSSSLVSNSASTSSAIQHNKLSSLQELPTCPVCLERMDATITGLLTILCQHTFHCQCLQKWGDSSCPVCRHTNADSYGTYEQADSSSALPALSSKCYVCEAGSNLWACLICGHVGCGRYDKAHAYDHYVATGHCFSMDITTQRVWDYSSDGYVHRLIQNQSDGKLVELPSGSSSTADGKKDIENDLSLQYTYLLTSQLESQREYYESLLAEAEGALLQYRTLDDRIDRIKQENEAKFQTDHARLLEKVKTISESVTQANRQIEEEKAFSLGLVTKVDSLVETIKQKDQEINDLNDQIRDLMFFLDAKEKLANADEDVQQGTVSVAPAPSKKKPKRKPKK
SIO_010081: AWJ20_354
subclass of: SO_0000673
so part of: AWJ20_354
location: 1129517..1131691
location: region:1129517-1131691:1
so has part: feature:1129517-1131691:1:exon

XP_018734593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1129517-1131691:1:exon

AWJ20_355
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PRS3
locus tag: AWJ20_355
so part of: sequence
location: <1132699..>1133436
location: region:1132699-1133436:1
so has part: feature:1132699-1133436:1:exon
subclass of: SO_0000010

30035584
type: Gene
SIO_000068: ncbigene

position:1132699:1
position: 1132699
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1133436:1
position: 1133436
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132699-1133436:1:exon

AWJ20_355
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PRS3
locus tag: AWJ20_355
product: ribose phosphate diphosphokinase subunit PRS3
transcript id: XM_018880576.1
SIO_010081: AWJ20_355
subclass of: SO_0000673
so part of: AWJ20_355
location: <1132699..>1133436
location: region:1132699-1133436:1
so has part: feature:1132699-1133436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1132699-1133436:1:exon

AWJ20_355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PRS3
locus tag: AWJ20_355
inference: similar to AA sequence:KEGG_Orthology:K00948
note: 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA,IEA]; GO_function: GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IGI] [PMID 15280369]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IMP] [PMID 10212224]; GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IGI] [PMID 15280369]; GO_process: GO:0044249 - cellular biosynthetic process [Evidence IEA]; GO_process: GO:0031505 - fungal-type cell wall organization [Evidence IPI] [PMID 15470112]; GO_process: GO:0009165 - nucleotide biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0016310 - phosphorylation [Evidence IEA]; GO_process: GO:0008361 - regulation of cell size [Evidence IMP] [PMID 12089449]; GO_process: GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
codon start: 1
product: ribose phosphate diphosphokinase subunit PRS3
translation: MINACKTASARRITAVIPNFPYARQDRKDKSRAPITAKLMANMLETAGCNHVITMDLHASQIQGFFDVPVDNLYAEPSVVNYIKNNVDYKNAIIVSPDAGGAKRAASLADRLDLNFALIHKERARANEVSRMVLVGDVSDKVCILVDDMADTCGTLAKAADTLLGHGAQSVIAIVTHGILSGKATEIINKSKLHRVVCTNTVPLEGKELVCDRLQLLDVSPVLAESIRRLHNGESVSYLFRNAPV
SIO_010081: AWJ20_355
subclass of: SO_0000673
so part of: AWJ20_355
location: 1132699..1133436
location: region:1132699-1133436:1
so has part: feature:1132699-1133436:1:exon

XP_018734594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132699-1133436:1:exon

AWJ20_356
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_356
so part of: sequence
location: complement(<1133631..>1134443)
location: region:1133631-1134443:-1
so has part: feature:1133631-1134443:-1:exon
subclass of: SO_0000010

30035595
type: Gene
SIO_000068: ncbigene

position:1133631:-1
position: 1133631
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1134443:-1
position: 1134443
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133631-1134443:-1:exon

AWJ20_356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_356
product: hypothetical protein
transcript id: XM_018880587.1
SIO_010081: AWJ20_356
subclass of: SO_0000673
so part of: AWJ20_356
location: complement(<1133631..>1134443)
location: region:1133631-1134443:-1
so has part: feature:1133631-1134443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133631-1134443:-1:exon

AWJ20_356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_356
inference: similar to AA sequence:KEGG_Orthology:K17623
codon start: 1
product: hypothetical protein
translation: MASTTANTSSSTSTTSSSTPAHAHIQIKACLFDMDGLLINSEDIYTEITNEILHEHGKPSLPWEVKVQLQGRPGPDASRKLLEWAQLPYTPEEYFKMTSERQKTRWNKTTFMPGALELLQHLEDIKVPFALATSSHHANYLLKTKHLRHGFDLFGDHVVVGDDKRIPPGRGKPHPDIWHVALESLNSVQRAKNLPEIKPEECLVFEDGVPGVIAGKAAGCRVIWVPDSRALEVLDQNEVVDLVGDHELLESLHHFDKAKYGLEKPTLTGL
SIO_010081: AWJ20_356
subclass of: SO_0000673
so part of: AWJ20_356
location: complement(1133631..1134443)
location: region:1133631-1134443:-1
so has part: feature:1133631-1134443:-1:exon

XP_018734595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133631-1134443:-1:exon

AWJ20_357
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_357
so part of: sequence
location: <1135921..>1137705
location: region:1135921-1137705:1
so has part: feature:1135921-1137705:1:exon
subclass of: SO_0000010

30035606
type: Gene
SIO_000068: ncbigene

position:1135921:1
position: 1135921
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1137705:1
position: 1137705
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135921-1137705:1:exon

AWJ20_357
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_357
product: hypothetical protein
transcript id: XM_018880598.1
SIO_010081: AWJ20_357
subclass of: SO_0000673
so part of: AWJ20_357
location: <1135921..>1137705
location: region:1135921-1137705:1
so has part: feature:1135921-1137705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1135921-1137705:1:exon

AWJ20_357
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_357
codon start: 1
product: hypothetical protein
translation: MRLLPVSFRSRRRVTSQIKDVIIIALATGIAGLIFFRPHYRHEKRIIQSQDPNLEHRRQDGDGTNTQKIFTLRPDQTFFHTYPDNNRYISGDTWRPPQSFGPQVVKYDDNKDGQFGKINLQQRLTADHTVNANKILLLLKTGSKTLWDRVPVHFFTTLTRFPNFALYSDAADSIAGYEVVDILANVSQSLLLESDQFSVYRSYRQLRSKHNYLRTSDVDDIPGGWELDKFKNIRMFYHAYKEAPDMEWYVMIDDDTIILADNLSKYLRTLDPRKEYYLGSAVAGLKHIFAHGGSGIVLSQGAMKKAFGSPSSEDWVEQYTLKAENECCGDYMVAMYLKETADISLDFSASGGRFQGEPIWAVPCSANNWCQEIITLHHQGPADFELLWEYERVRKSSGNKGPILYRDIYNDFAKPYLSKDPQKNWDNGAKDVEYSWAIEYDKAQSEGSKQLPLPQDASSEPYASFDLCKRECEAKTDCIMYRYDPYSRYCGLSSSTIALGRPVIKYDDDGYHDRCRGLEINCPPRDTKQDSHQMISGWYLDRAIAMRKAIPCDKLHKTPDADGQVNGVRDQVEGWYIRAKSRYPDSFPDPLKHL
SIO_010081: AWJ20_357
subclass of: SO_0000673
so part of: AWJ20_357
location: 1135921..1137705
location: region:1135921-1137705:1
so has part: feature:1135921-1137705:1:exon

XP_018734596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135921-1137705:1:exon

AWJ20_358
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TUB1
locus tag: AWJ20_358
so part of: sequence
location: complement(<1137978..>1139324)
location: region:1137978-1139324:-1
so has part: feature:1137978-1139324:-1:exon
subclass of: SO_0000010

30035617
type: Gene
SIO_000068: ncbigene

position:1137978:-1
position: 1137978
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1139324:-1
position: 1139324
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137978-1139324:-1:exon

AWJ20_358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TUB1
locus tag: AWJ20_358
product: alpha-tubulin TUB1
transcript id: XM_018880609.1
SIO_010081: AWJ20_358
subclass of: SO_0000673
so part of: AWJ20_358
location: complement(<1137978..>1139324)
location: region:1137978-1139324:-1
so has part: feature:1137978-1139324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1137978-1139324:-1:exon

AWJ20_358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TUB1
locus tag: AWJ20_358
inference: similar to AA sequence:KEGG_Orthology:K07374
note: Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; relative distribution to nuclear foci increases upon DNA replication stress; TUB1 has a paralog, TUB3, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0005881 - cytoplasmic microtubule [Evidence IC] [PMID 9488492]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA,IEA]; GO_component: GO:0005828 - kinetochore microtubule [Evidence IC] [PMID 9488492]; GO_component: GO:0005874 - microtubule [Evidence IEA,IEA]; GO_component: GO:0005880 - nuclear microtubule [Evidence IC] [PMID 9488492]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_component: GO:0005827 - polar microtubule [Evidence IC] [PMID 9488492]; GO_component: GO:0043234 - protein complex [Evidence IEA]; GO_component: GO:0005816 - spindle pole body [Evidence IDA] [PMID 9585415]; GO_component: GO:0045298 - tubulin complex [Evidence IDA,IPI] [PMID 9488492]; GO_function: GO:0005525 - GTP binding [Evidence IEA,IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO_process: GO:0006184 - GTP catabolic process [Evidence IEA]; GO_process: GO:0045143 - homologous chromosome segregation [Evidence IMP] [PMID 16582437]; GO_process: GO:0007017 - microtubule-based process [Evidence IEA]; GO_process: GO:0000070 - mitotic sister chromatid segregation [Evidence IMP] [PMID 16582437]; GO_process: GO:0030473 - nuclear migration along microtubule [Evidence IMP] [PMID 16582437]; GO_process: GO:0051258 - protein polymerization [Evidence IEA]
codon start: 1
product: alpha-tubulin TUB1
translation: MREVISINVGQAGCQIGNSCWELYCLEHGIQPDGFLSADKKDGPRDEGFSTFFSETGSGKYVPRTIYVDLEPNVVDEVRTGTYRNLFHPEQLITGKEDAANNYARGHYTIGKELIDQVMDRVRRVADNCNGLQGFLFTHSFGGGTGSGFGALLLERLSVDYGKKSKLEFAVYPAPQNSTSVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDMCRRSLDIARPSYDNLNRLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVTYAPVSSAAKANHEANTVQEITNACFEPSHQMVKCDLRNGKYMATCLLYRGDVVNKDVQQAVATIKAKKSIQLVDWCPTGFKIGICYQPPQYVPGGDLAKVDRAVCMLSNTTAIADAWSRLDHKFDLMFSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGADSTYDEEEAEY
SIO_010081: AWJ20_358
subclass of: SO_0000673
so part of: AWJ20_358
location: complement(1137978..1139324)
location: region:1137978-1139324:-1
so has part: feature:1137978-1139324:-1:exon

XP_018734597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137978-1139324:-1:exon

AWJ20_359
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ALD5
locus tag: AWJ20_359
so part of: sequence
location: complement(<1140701..>1142104)
location: region:1140701-1142104:-1
so has part: feature:1140701-1142104:-1:exon
subclass of: SO_0000010

30035628
type: Gene
SIO_000068: ncbigene

position:1140701:-1
position: 1140701
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1142104:-1
position: 1142104
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140701-1142104:-1:exon

AWJ20_359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ALD5
locus tag: AWJ20_359
product: aldehyde dehydrogenase (NAD(P)(+)) ALD5
transcript id: XM_018880618.1
SIO_010081: AWJ20_359
subclass of: SO_0000673
so part of: AWJ20_359
location: complement(<1140701..>1142104)
location: region:1140701-1142104:-1
so has part: feature:1140701-1142104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140701-1142104:-1:exon

AWJ20_359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ALD5
locus tag: AWJ20_359
inference: similar to AA sequence:KEGG_Orthology:K00128
note: Mitochondrial aldehyde dehydrogenase; involved in regulation or biosynthesis of electron transport chain components and acetate formation; activated by K+; utilizes NADP+ as the preferred coenzyme; constitutively expressed; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0004029 - aldehyde dehydrogenase (NAD) activity [Evidence IDA] [PMID 9473035]; GO_function: GO:0004030 - aldehyde dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO_function: GO:0004030 - aldehyde dehydrogenase [NAD(P)+] activity [Evidence IDA] [PMID 9473035]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_process: GO:0019413 - acetate biosynthetic process [Evidence IMP] [PMID 15256563]; GO_process: GO:0006068 - ethanol catabolic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: aldehyde dehydrogenase (NAD(P)(+)) ALD5
translation: MSADKREVYQTINPATGEVVKTFPTATDEEIQKALAVADEVFQKDWRFRSVKERADIVRKAADILESKSEEYAKLVTLEMGKLLTQARMEVTLSVRILKYYADNGERLLAPSPIAGSNGAIQVNNEPIGIIFAIEPWNFPYYQLARVAGPQLVTGNVMLAKHAPSVPQCALAFARLFEEAGAPAGVYTNVFASITQSGTIIDDFRVRGVTLTGSERAGAAVAERAGKNLKKVVLELGGSDPLIVFPDADFEPTLNLALIGRLMNTGQACVASKRIIVIGKERGDEFIKRYTEAIKSLSKAVGDPNDEKTSIGPLVSEQALNGLLSQIESAKKHGATILAGGKRINRPGWYLEPTVITNIKPDNPLYREETFGPVASFYIVDTEEEAIRLANDTSYGLGASIFSKDIAKAQEVAKQIDSGMVFINQPAQSLPHVPFGGVKNSGFGRELGELGMTEFVNKKVISAKSLL
SIO_010081: AWJ20_359
subclass of: SO_0000673
so part of: AWJ20_359
location: complement(1140701..1142104)
location: region:1140701-1142104:-1
so has part: feature:1140701-1142104:-1:exon

XP_018734598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1140701-1142104:-1:exon

AWJ20_360
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: ADH6
locus tag: AWJ20_360
so part of: sequence
location: complement(<1143860..>1144945)
location: region:1143860-1144945:-1
so has part: feature:1143860-1144945:-1:exon
subclass of: SO_0000010

30035640
type: Gene
SIO_000068: ncbigene

position:1143860:-1
position: 1143860
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1144945:-1
position: 1144945
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143860-1144945:-1:exon

AWJ20_360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: ADH6
locus tag: AWJ20_360
product: Adh6p
transcript id: XM_018880628.1
SIO_010081: AWJ20_360
subclass of: SO_0000673
so part of: AWJ20_360
location: complement(<1143860..>1144945)
location: region:1143860-1144945:-1
so has part: feature:1143860-1144945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1143860-1144945:-1:exon

AWJ20_360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: ADH6
locus tag: AWJ20_360
inference: similar to AA sequence:KEGG_Orthology:K00002
note: NADPH-dependent medium chain alcohol dehydrogenase; has broad substrate specificity; member of the cinnamyl family of alcohol dehydrogenases; may be involved in fusel alcohol synthesis or in aldehyde tolerance; protein abundance increases in response to DNA replication stress; GO_component: GO:0005575 - cellular_component [Evidence ND]; GO_function: GO:0008106 - alcohol dehydrogenase (NADP+) activity [Evidence IEA]; GO_function: GO:0008106 - alcohol dehydrogenase (NADP+) activity [Evidence IDA] [PMID 11742541]; GO_function: GO:0033833 - hydroxymethylfurfural reductase (NADH) activity [Evidence IMP] [PMID 16652391]; GO_function: GO:0033845 - hydroxymethylfurfural reductase (NADPH) activity [Evidence IMP] [PMID 16652391]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006066 - alcohol metabolic process [Evidence IDA] [PMID 11742541]; GO_process: GO:0006081 - cellular aldehyde metabolic process [Evidence IDA] [PMID 11742541]; GO_process: GO:0033859 - furaldehyde metabolic process [Evidence IMP] [PMID 16652391]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]
codon start: 1
product: Adh6p
translation: MVYPDTFRGYAHTKEGTKNVVPVLKEIEFKPKVFAEHDVDIKVVACGVCGSDVHSVCGEWGSTDYPLIPGHEIVGHVVRVGSKVTTVKVGDRVGVGAQSFSCLECPDCLADNEPYCLNSVGTYGGKYENGDKSYGGYSDYARVHEHFVFTIPDNLSFEGAAPLLCAGITTYSPLVRHGAGPGKTVGIVGIGGLGHFGLMWAKALGAEVYALSRSESKKADAIKLGADHYVATGVDGWHKTVERKFDFILCCANSADNFDLNSYLKTLKVGGHFINVGLPEDNYTVHPTSFLKNASFLGSSLLGSRKEIQDMLKLASEQKLEAWHSTIPVNEEGVYKALDGCKRGTPKYRYVLTNYEQGFTL
SIO_010081: AWJ20_360
subclass of: SO_0000673
so part of: AWJ20_360
location: complement(1143860..1144945)
location: region:1143860-1144945:-1
so has part: feature:1143860-1144945:-1:exon

XP_018734599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1143860-1144945:-1:exon

AWJ20_361
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GLK1
locus tag: AWJ20_361
so part of: sequence
location: <1147694..>1149109
location: region:1147694-1149109:1
so has part: feature:1147694-1149109:1:exon
subclass of: SO_0000010

30035651
type: Gene
SIO_000068: ncbigene

position:1147694:1
position: 1147694
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1149109:1
position: 1149109
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147694-1149109:1:exon

AWJ20_361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GLK1
locus tag: AWJ20_361
product: glucokinase
transcript id: XM_018880638.1
SIO_010081: AWJ20_361
subclass of: SO_0000673
so part of: AWJ20_361
location: <1147694..>1149109
location: region:1147694-1149109:1
so has part: feature:1147694-1149109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147694-1149109:1:exon

AWJ20_361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GLK1
locus tag: AWJ20_361
inference: similar to AA sequence:KEGG_Orthology:K00844
note: Glucokinase; catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism; one of three glucose phosphorylating enzymes; expression regulated by non-fermentable carbon sources; GLK1 has a paralog, EMI2, that arose from the whole genome duplication; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 14562095]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 16622836]; GO_function: GO:0005524 - ATP binding [Evidence IEA,IEA]; GO_function: GO:0004340 - glucokinase activity [Evidence IEA]; GO_function: GO:0004340 - glucokinase activity [Evidence IMP] [PMID 6341351]; GO_function: GO:0004340 - glucokinase activity [Evidence IDA] [PMID 8501032]; GO_function: GO:0004396 - hexokinase activity [Evidence IEA]; GO_function: GO:0016301 - kinase activity [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0046835 - carbohydrate phosphorylation [Evidence IEA]; GO_process: GO:0051156 - glucose 6-phosphate metabolic process [Evidence IEA]; GO_process: GO:0046323 - glucose import [Evidence IGI] [PMID 6300872]; GO_process: GO:0006006 - glucose metabolic process [Evidence IMP] [PMID 6300872]; GO_process: GO:0006096 - glycolytic process [Evidence IEA,IEA]; GO_process: GO:0006096 - glycolytic process [Evidence IDA] [PMID 8501032]; GO_process: GO:0006013 - mannose metabolic process [Evidence IDA] [PMID 237183]; GO_process: GO:0016310 - phosphorylation [Evidence IEA]
codon start: 1
product: glucokinase
translation: MTSTSLVTAVNDLVEEFAVSDKVLNDSVNYFVEQSVHGLAETADSSARGLPMIPTFVTSVPTGEEKGTFLAVDLGGTNFRVCSLKLNGDSTYDMVQDKAPIPQELMVGNCSDFFGHLADRIQQFLETHHSETISCAFEEEGAGKPVLFKMGFTFSFPVDQTALNRGKLIRWTKGFDIKDAVGKDICLELQNAIDARNLPVHVAALVNDTVGTLMSRAYTKPSDGRTLIGCIFGTGTNGAYSERIKKIPKFDAQAHPEVTEKIMVINTEWGSFDNDLKVIPNTRFDKQVNENTPNKGFHMFEKRISGMFLGELLRLVLTELQSKKLLFTSGSGNGKLSVAWSADSSVPALIDGDSSSDLSLAGNTIKEAFGYETTLEERKQIQRVARAIGKRSGYLSAIPLAGLIIHTKALEKFDKIDIGADGSVVEFYPHFQEYIHDALRKTVIGDDEKRVAIGIAKDGSGVGAALCALVA
SIO_010081: AWJ20_361
subclass of: SO_0000673
so part of: AWJ20_361
location: 1147694..1149109
location: region:1147694-1149109:1
so has part: feature:1147694-1149109:1:exon

XP_018734600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1147694-1149109:1:exon

AWJ20_362
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YOX1
locus tag: AWJ20_362
so part of: sequence
location: complement(<1149439..>1152048)
location: region:1149439-1152048:-1
so has part: feature:1149439-1152048:-1:exon
subclass of: SO_0000010

30035662
type: Gene
SIO_000068: ncbigene

position:1149439:-1
position: 1149439
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1152048:-1
position: 1152048
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149439-1152048:-1:exon

AWJ20_362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YOX1
locus tag: AWJ20_362
product: Yox1p
transcript id: XM_018880649.1
SIO_010081: AWJ20_362
subclass of: SO_0000673
so part of: AWJ20_362
location: complement(<1149439..>1152048)
location: region:1149439-1152048:-1
so has part: feature:1149439-1152048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1149439-1152048:-1:exon

AWJ20_362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YOX1
locus tag: AWJ20_362
inference: similar to AA sequence:KEGG_Orthology:K12411
note: Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; potential Cdc28p substrate; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0000790 - nuclear chromatin [Evidence IDA] [PMID 12464632]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 15282802]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_function: GO:0003677 - DNA binding [Evidence IEA,IEA]; GO_function: GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding [Evidence IDA,IMP] [PMID 12464633]; GO_function: GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding [Evidence IDA] [PMID 20385087]; GO_function: GO:0001191 - RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription [Evidence IPI] [PMID 12464633]; GO_function: GO:0001191 - RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription [Evidence IMP,IPI] [PMID 20385087]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19158363]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0071930 - negative regulation of transcription involved in G1/S transition of mitotic cell cycle [Evidence IGI,IMP] [PMID 12464633]; GO_process: GO:0071930 - negative regulation of transcription invo…
codon start: 1
product: Yox1p
translation: MNAGSSTTKQESSGSGSATASDTASRQQVNMAPSVGAVALQPPLNRSRTGSVPVPLSGPSSASHSSNVAGLPPILPAGYDQQPPPPEAFENNQLYQIYRLRHAVQQRREQSFPAPPPLTSFSTPPSPPSATSPSVRGPPQPDLRSRDIRDRDPHGQVVGPGHGPGHGPGHSTVISVPESPAESMKDIFSSTSSSTRKESTSSLGSPLSGPSTNVSPTSTHPAQNPTQKTVLPSVQSLLASISPPPRRRVSHEYPTSQREKLRENRRSVPSPLPPATRDRPRSLYSSFTIPESSRQQQTSALQSSPLEPRRTFYYTPSIPEAPSKPLEHQPPVHFAPGFQPVYPEHPQQHPPPPPPRPVHSQQLPPPPTQPSQLQPSQLGPPHRQQVPPPPPPPAHVQQSTTLQHPLHPRQQQVPVRQPPLQHEQAPTPAPAPLQAPPQLQPAYPIQSSQPQPHSYPQSPNTYYTYGKASSPYTSPIIHGTGSGSSQINPSRGSVSGSQYSPIRRQSYPRSPPPPPQHAPPHLSHNHPGPPPAPSQVPPPPPPPPHPSQRRIPPSHSVQPFGVSPVIPPPPPPSGPLGQVSPRMRPQLQIGIPRESQYHQPPLVHPQPQYQVQVKEQPPQSHPQLVPSQRFQHHIPPEPLGSRGKMPVKPPKSSPLKFRPPLQPQGLRHTPRMPIREPIAGPSSRTLPQPLQPRPPHLKGQRPTRAVKPKRKRATSYQVTRLNEVFQQTFFPSSELRLHLAMELGMTPRTVQIWFQNRRQGWRSENNRTIPREGVNPWSEEGIDVPGKPSSSASRRPIAGTGVIDFSKPYPPSTRGDYMQEDEEDEEEEEDDDDGDEDDDDDSEEPDEDYGDMSDDEPPRPPGDAPPHRP
SIO_010081: AWJ20_362
subclass of: SO_0000673
so part of: AWJ20_362
location: complement(1149439..1152048)
location: region:1149439-1152048:-1
so has part: feature:1149439-1152048:-1:exon

XP_018734601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149439-1152048:-1:exon

AWJ20_363
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: HSP12
locus tag: AWJ20_363
so part of: sequence
location: <1164775..>1165140
location: region:1164775-1165140:1
so has part: feature:1164775-1165140:1:exon
subclass of: SO_0000010

30035673
type: Gene
SIO_000068: ncbigene

position:1164775:1
position: 1164775
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1165140:1
position: 1165140
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164775-1165140:1:exon

AWJ20_363
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: HSP12
locus tag: AWJ20_363
product: lipid-binding protein HSP12
transcript id: XM_018880660.1
SIO_010081: AWJ20_363
subclass of: SO_0000673
so part of: AWJ20_363
location: <1164775..>1165140
location: region:1164775-1165140:1
so has part: feature:1164775-1165140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1164775-1165140:1:exon

AWJ20_363
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: HSP12
locus tag: AWJ20_363
note: Plasma membrane protein involved in maintaining membrane organization; involved in maintaining organization during stress conditions; induced by heat shock, oxidative stress, osmostress, stationary phase, glucose depletion, oleate and alcohol; protein abundance increased in response to DNA replication stress and dietary restriction; regulated by the HOG and Ras-Pka pathways; required for dietary restriction-induced lifespan extension; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 20797624]; GO_component: GO:0005768 - endosome [Evidence IDA] [PMID 20797624]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 10675505]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 16622836]; GO_component: GO:0005886 - plasma membrane [Evidence IDA] [PMID 20797624]; GO_function: GO:0008289 - lipid binding [Evidence IDA] [PMID 20797624]; GO_process: GO:0007155 - cell adhesion [Evidence IDA] [PMID 11816034]; GO_process: GO:0034605 - cellular response to heat [Evidence IMP] [PMID 20797624]; GO_process: GO:0071470 - cellular response to osmotic stress [Evidence IMP] [PMID 20797624]; GO_process: GO:0034599 - cellular response to oxidative stress [Evidence IMP] [PMID 20797624]; GO_process: GO:0007009 - plasma membrane organization [Evidence IMP] [PMID 20797624]; GO_process: GO:0006950 - response to stress [Evidence IEA,IEA]
codon start: 1
product: lipid-binding protein HSP12
translation: MSDAGRKNFGDKVSESLTPDSQKTTYDSVKETATDAYDKAAANLTPDSQKSVSQKAGDEFTGAKNDLSSATSKQSSETSSSASEGLKGIVDTAADYAHQAADYIRGTGDSTTTTGSTGTTK
SIO_010081: AWJ20_363
subclass of: SO_0000673
so part of: AWJ20_363
location: 1164775..1165140
location: region:1164775-1165140:1
so has part: feature:1164775-1165140:1:exon

XP_018734602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1164775-1165140:1:exon

AWJ20_364
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GAT1
locus tag: AWJ20_364
so part of: sequence
location: <1167991..>1170957
location: region:1167991-1170957:1
so has part: feature:1167991-1170957:1:exon
subclass of: SO_0000010

30035684
type: Gene
SIO_000068: ncbigene

position:1167991:1
position: 1167991
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1170957:1
position: 1170957
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167991-1170957:1:exon

AWJ20_364
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GAT1
locus tag: AWJ20_364
product: Gat1p
transcript id: XM_018880670.1
SIO_010081: AWJ20_364
subclass of: SO_0000673
so part of: AWJ20_364
location: <1167991..>1170957
location: region:1167991-1170957:1
so has part: feature:1167991-1170957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167991-1170957:1:exon

AWJ20_364
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GAT1
locus tag: AWJ20_364
note: Transcriptional activator of nitrogen catabolite repression genes; contains a GATA-1-type zinc finger DNA-binding motif; activity and localization regulated by nitrogen limitation and Ure2p; different translational starts produce two major and two minor isoforms that are differentially regulated and localized; GO_component: GO:0005829 - cytosol [Evidence IDA] [PMID 10799523]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 10799523]; GO_component: GO:0005634 - nucleus [Evidence IPI] [PMID 19380492]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0001077 - RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [Evidence ISA] [PMID 7568152]; GO_function: GO:0001077 - RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [Evidence IMP] [PMID 9106207]; GO_function: GO:0001076 - RNA polymerase II transcription factor binding transcription factor activity [Evidence IMP] [PMID 19380492]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19158363]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IGI] [PMID 7568152]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0090294 - nitrogen catabolite activation of transcription [Evidence IGI,IMP] [PMID 7568152]; GO_process: GO:0090294 - nitrogen catabolite activation of transcription [Evidence IGI,IMP] [PMID 8622686]; GO_process: GO:0001080 - nitrogen catabolit…
codon start: 1
product: Gat1p
translation: MLPGLLKMMIMDDIGPSFGGDDTSSSSPLPNNMHHGHIRAALDFIGSNTTDPLVKKESAEDTFQLPSALYFGNGEMTDDDMNITDENTASNAATAAVSSSSTSVSGQGSSSSSSSTSDIWKMYSKARFSMLPNRSRIENLTWRMMSMDIVNARANNNLTLASAHPISMSSGVDNLQSGYQLADGYPQFNSVSSSIRNMPTNHQVPNMNTSGAPDSNEWSAYNQHRRSQSIDTSQRPFQPANGQGQMGQFSVNDNQQSHLQHQHQQQQLQQQHHHQQQQQQQHQQHQQQLQQQQQQQQQLSYRSQSNSNLHSQAQQPSRLQYQPTAADLSSLQPQKPHGSPSFAALSPSPSASQSGPGSFDYAAHIKKLNNTIHQREHAPPLSRGTSFSRKRQANSPLALAAEGVSPAATSSNHDMQNEDGLVFGFATPEEEDNRFRFSLDPLVIEGLDGGLFGPSRPVSPKPSSNAHSLTTASPSVLNSQHQHHHQQRHHSSSSNSIQQFNSSSYSFHSTANPRDILTHSHSSSTASISDMYQLPSSIPSSAISSGATTPTFSVANGRESIFFDSIAKPRDDRRARFSVGMASSPVGNGWQDSVPHPRSYSDVNNTLPGSWHGGEHSQNASNTSLSSSMFQQRQLQNARHESAMSLDINNNPMADSSGANNPNSNNPSSFQHIHPSQLHNGSPSLQSELFQIGSLPNKSSTFFSLDTHDEMDEVQFNQPQGWKPKLTKTNSATTTSVLSQRLANSRKSTVAGGATGVAPSLAAAASAAIASTAVATPESEYSSPTSTPSGTATPGASESRTDSPSAASKQTTSKPAKETKPAVSSSSTSTPMSCTNCLTQTTPLWRRNTEGQPLCNACGLFLKLHGVVRPLSLKTDVIKKRNRGNGEEETTTTSGNKPRKSSSRRGSMVSERGSGSAPGSRRQSMTKARPKVTPTVVAEQLPATEKQPRQTTKVKQEPSVTVTSAIEDTPTTSPERRTGQWDWLTMTL
SIO_010081: AWJ20_364
subclass of: SO_0000673
so part of: AWJ20_364
location: 1167991..1170957
location: region:1167991-1170957:1
so has part: feature:1167991-1170957:1:exon

XP_018734603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1167991-1170957:1:exon

AWJ20_365
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SVL3
locus tag: AWJ20_365
so part of: sequence
location: complement(<1171769..>1173454)
location: region:1171769-1173454:-1
so has part: feature:1171769-1173454:-1:exon
subclass of: SO_0000010

30035695
type: Gene
SIO_000068: ncbigene

position:1171769:-1
position: 1171769
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1173454:-1
position: 1173454
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171769-1173454:-1:exon

AWJ20_365
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SVL3
locus tag: AWJ20_365
product: Svl3p
transcript id: XM_018880681.1
SIO_010081: AWJ20_365
subclass of: SO_0000673
so part of: AWJ20_365
location: complement(<1171769..>1173454)
location: region:1171769-1173454:-1
so has part: feature:1171769-1173454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1171769-1173454:-1:exon

AWJ20_365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SVL3
locus tag: AWJ20_365
note: hypothetical protein; mutant phenotype suggests a potential role in vacuolar function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; relocalizes from bud neck to cytoplasm upon DNA replication stress; SVL3 has a paralog, PAM1, that arose from the whole genome duplication; GO_component: GO:0005938 - cell cortex [Evidence IEA]; GO_component: GO:0005933 - cellular bud [Evidence IEA]; GO_component: GO:0005933 - cellular bud [Evidence IDA] [PMID 14562095]; GO_component: GO:0005935 - cellular bud neck [Evidence IEA]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 14562095]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 22842922]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 22842922]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0050661 - NADP binding [Evidence IEA]; GO_function: GO:0050662 - coenzyme binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_process: GO:0006897 - endocytosis [Evidence IMP] [PMID 9751732]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]
codon start: 1
product: Svl3p
translation: MIRDLVLFLQTSGLDASIVSSPGAFLKHQWQRAIPLIAFEPLSIMLDISDPAKLASSVVARPIYEGIINELLLIAKRQGGPECESLGSLDDFVHPMLIQSVTPKILTSTSPVFPHSSSVYMYYEYFYRFNIPVDIILLHPILLSDELGLSASTPYLECVFAFMTQLAKLNDHEDASTLWHRKNITVSGAGSLLAPPATTSTASSPASSNTGSSNSLLSTSVVDSKPASAASLAALKAREDALYKREQALLAREQHVYSLETNQHPPPNRRGSYQQQQQQQPLQQPQYQQQHQQQHQQQHQKQPSQQYYYPSQQQLQQQQRPPVPQGQAPQGQVPNRPPSRQQQQHNLAAPPPLSRPSIRTSPKRYTEPVLNFSSPQPVKNKEIDMMNITARRSRRSVGGPGSHNSELHLNRIGSSAGYHRMSSPTLSTLAGNAGGPQPFSQQFDLNDIVSGTDRYSMVANKPAATVKRLSSTIFRTGGGASQSRSNSISSQAASAYAFTNQIPCSQMNGYSSQNSSSSNGSNSSNTYVNGSGGASPYTNGVANSNGMINGTTNGTLHVHGK
SIO_010081: AWJ20_365
subclass of: SO_0000673
so part of: AWJ20_365
location: complement(1171769..1173454)
location: region:1171769-1173454:-1
so has part: feature:1171769-1173454:-1:exon

XP_018734604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1171769-1173454:-1:exon

AWJ20_366
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: EGD1
locus tag: AWJ20_366
so part of: sequence
location: <1178959..>1179405
location: region:1178959-1179405:1
so has part: feature:1178959-1179405:1:exon
subclass of: SO_0000010

30035706
type: Gene
SIO_000068: ncbigene

position:1178959:1
position: 1178959
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1179405:1
position: 1179405
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178959-1179405:1:exon

AWJ20_366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: EGD1
locus tag: AWJ20_366
product: Egd1p
transcript id: XM_018880692.1
SIO_010081: AWJ20_366
subclass of: SO_0000673
so part of: AWJ20_366
location: <1178959..>1179405
location: region:1178959-1179405:1
so has part: feature:1178959-1179405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178959-1179405:1:exon

AWJ20_366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: EGD1
locus tag: AWJ20_366
inference: similar to AA sequence:KEGG_Orthology:K01527
note: Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005854 - nascent polypeptide-associated complex [Evidence IDA] [PMID 10219998]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0051082 - unfolded protein binding [Evidence IMP] [PMID 9482879]; GO_process: GO:0051083 - 'de novo' cotranslational protein folding [Evidence IPI] [PMID 10219998]; GO_process: GO:0006620 - posttranslational protein targeting to membrane [Evidence IGI] [PMID 10518932]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006351 - transcription, DNA-templated [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Egd1p
translation: MDADKLARLQKSVRIGGKGTPRRKVKRTAKNTEGDDKKLQAALQKVQVQPITGIESVNMFKDDGTVLHFPRASVQASVPSNTFAITGNPVEKTMSEMLPEVLSSMGPESLEQLRQLTEQLKAGTGAKEAEDDDIPELVEGENFEDRVD
SIO_010081: AWJ20_366
subclass of: SO_0000673
so part of: AWJ20_366
location: 1178959..1179405
location: region:1178959-1179405:1
so has part: feature:1178959-1179405:1:exon

XP_018734605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1178959-1179405:1:exon

AWJ20_367
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: GAD1
locus tag: AWJ20_367
so part of: sequence
location: <1182000..>1183661
location: region:1182000-1183661:1
so has part: feature:1182000-1183661:1:exon
subclass of: SO_0000010

30035716
type: Gene
SIO_000068: ncbigene

position:1182000:1
position: 1182000
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1183661:1
position: 1183661
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182000-1183661:1:exon

AWJ20_367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: GAD1
locus tag: AWJ20_367
product: glutamate decarboxylase GAD1
transcript id: XM_018880702.1
SIO_010081: AWJ20_367
subclass of: SO_0000673
so part of: AWJ20_367
location: <1182000..>1183661
location: region:1182000-1183661:1
so has part: feature:1182000-1183661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1182000-1183661:1:exon

AWJ20_367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: GAD1
locus tag: AWJ20_367
inference: similar to AA sequence:KEGG_Orthology:K01580
note: Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0016831 - carboxy-lyase activity [Evidence IEA,IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004351 - glutamate decarboxylase activity [Evidence IEA,IEA]; GO_function: GO:0004351 - glutamate decarboxylase activity [Evidence IMP] [PMID 11031268]; GO_function: GO:0016829 - lyase activity [Evidence IEA,IEA]; GO_function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO_process: GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO_process: GO:0034599 - cellular response to oxidative stress [Evidence IMP] [PMID 11031268]; GO_process: GO:0006538 - glutamate catabolic process [Evidence IMP] [PMID 11031268]; GO_process: GO:0006536 - glutamate metabolic process [Evidence IEA]
codon start: 1
product: glutamate decarboxylase GAD1
translation: MSLSDDVNAETLLAKLQKTTPDSAVGLRAGNQNTTEGSHDLARYIHEPIPKFRMQEAAIDKRIVASVIRSELDLDGIPSLNLASFVNTFIEEPALSLLADNIGKNLADGDEYPALQTIHQRCVAILSNLWNVPKGELGVGTATTGSSEAIHLGGLAMKRRWEAAQRAKGRDIKGVTPNIIMGSNAQVALEKFARYFDVTARLLPVDAENSYGFNPQDLKKTVDENTIGVFVIAGSTYTGHYQDVEAVSDVLDEIEKETGISVDIHVDGASGALVAPFVTPSLKFDFRIDRVKSINTSGHKFGLVTVGLGWIIWRDRKYLPEELLFTLHYLGGSEDTYTLNFSRPGFPVIHQYYNFVSLGLEGYRNLHSASLANARLFATFLEATGYFEVLSDIHRPKGVHSYTGKPSDITNQDPEFYNPGLPVVSFRFSKSFREQYPMIPQQAVSTLLRVRGYIIPNYPMPADLEDIEVLRVVVRASLSVDILDMLMEHIVATVQKLTSSVKDHYTAETESDKLYKTLLALTTSNPLDSEHPQYWDFQEETGTRSGHSHGTKC
SIO_010081: AWJ20_367
subclass of: SO_0000673
so part of: AWJ20_367
location: 1182000..1183661
location: region:1182000-1183661:1
so has part: feature:1182000-1183661:1:exon

XP_018734606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1182000-1183661:1:exon

AWJ20_368
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PCL5
locus tag: AWJ20_368
so part of: sequence
location: complement(<1194756..>1196012)
location: region:1194756-1196012:-1
so has part: feature:1194756-1196012:-1:exon
subclass of: SO_0000010

30035727
type: Gene
SIO_000068: ncbigene

position:1194756:-1
position: 1194756
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1196012:-1
position: 1196012
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194756-1196012:-1:exon

AWJ20_368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PCL5
locus tag: AWJ20_368
product: Pcl5p
transcript id: XM_018880713.1
SIO_010081: AWJ20_368
subclass of: SO_0000673
so part of: AWJ20_368
location: complement(<1194756..>1196012)
location: region:1194756-1196012:-1
so has part: feature:1194756-1196012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194756-1196012:-1:exon

AWJ20_368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PCL5
locus tag: AWJ20_368
note: Cyclin; interacts with and phosphorylated by Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcription, specifically required for Gcn4p degradation, may be sensor of cellular protein biosynthetic capacity; GO_component: GO:0000307 - cyclin-dependent protein kinase holoenzyme complex [Evidence IPI] [PMID 16611745]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 19218424]; GO_function: GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity [Evidence IDA] [PMID 12101234]; GO_function: GO:0019901 - protein kinase binding [Evidence IEA]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0016242 - negative regulation of macroautophagy [Evidence IMP] [PMID 20417603]; GO_process: GO:0043433 - negative regulation of sequence-specific DNA binding transcription factor activity [Evidence IMP] [PMID 12101234]; GO_process: GO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity [Evidence IEA]; GO_process: GO:0031647 - regulation of protein stability [Evidence IMP] [PMID 12101234]
codon start: 1
product: Pcl5p
translation: MLTIIPVHDLTADEPLDLSSPSHSLVSSSSSTGSSASIFSSATVGDYESATSSVESSTSPEITILNERKAPTPTAKPTVSKLLKHENTKTVFVEALVGSAVLLVDAIWKNPGGSSKKSMPLRRFIQETLKRSRTSYSTFQVSLYYLILVKPFIFEQARQKRLAKSPLSCARRTFLASLMLASKCLQDRNYSISAWSKISGLSVKELGNNEIEFLKAADWKLHVPQEVYNRWSTLLLSSGSVKPETWKNRIKTIGPDIKFDECSYATVWGDFIDLTATGEDVTSGYNCSTGTSDSCDVTIAKVSDTSPVEVECDMPLTPEPTKTQFTPPQTGAYYMTNRDEWRYIRSSLAIKQKLQTNMKALQAKQRSVEAVVLATPAPSEVRLTAERKRSFTAEDDEAISIVNVRSVKRRVIHVDGII
SIO_010081: AWJ20_368
subclass of: SO_0000673
so part of: AWJ20_368
location: complement(1194756..1196012)
location: region:1194756-1196012:-1
so has part: feature:1194756-1196012:-1:exon

XP_018734607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1194756-1196012:-1:exon

AWJ20_369
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: IVY1
locus tag: AWJ20_369
so part of: sequence
location: <1199861..>1201993
location: region:1199861-1201993:1
so has part: feature:1199861-1201993:1:exon
subclass of: SO_0000010

30035738
type: Gene
SIO_000068: ncbigene

position:1199861:1
position: 1199861
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1201993:1
position: 1201993
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199861-1201993:1:exon

AWJ20_369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: IVY1
locus tag: AWJ20_369
product: Ivy1p
transcript id: XM_018880724.1
SIO_010081: AWJ20_369
subclass of: SO_0000673
so part of: AWJ20_369
location: <1199861..>1201993
location: region:1199861-1201993:1
so has part: feature:1199861-1201993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199861-1201993:1:exon

AWJ20_369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: IVY1
locus tag: AWJ20_369
note: Phospholipid-binding protein that interacts with both Ypt7p and Vps33p; may partially counteract the action of Vps33p and vice versa, localizes to the rim of the vacuole as cells approach stationary phase; GO_component: GO:0000329 - fungal-type vacuole membrane [Evidence IDA] [PMID 12553664]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005774 - vacuolar membrane [Evidence IEA]; GO_component: GO:0005773 - vacuole [Evidence IEA]; GO_function: GO:0005543 - phospholipid binding [Evidence IDA] [PMID 12553664]; GO_process: GO:0042144 - vacuole fusion, non-autophagic [Evidence IGI,IMP,IPI] [PMID 12553664]
codon start: 1
product: Ivy1p
translation: MSGEDASSSPVQSRSTTGRPPLGTSSSHSNSPVPPQHLSEFYSFVNPGLPSPAFSGVSRDRDIDGGDTGHGSRGFMSGGHGHNNRNNAAAAGYGYNHSRNNSSASTDDHVAGSAGVAAGAAGFINRNTGSGTPVHGSSSMSAYGIGPGSRPGSGLASGRPGSASGPAGPPGGPGTSSSPWGFGLFRKPSIASFQTADSTMSASFSNIGNNHPDLPALITSSEIENTAKTYQSLLDSAARYRESILTMSRAAADFGQALEACSRCKGAGSSSDGLQAAGGLHYLVSNHQQILAKSITSAFEVPVKKQLDSFTQVAKENELKFKAELKEKTRNLKRREAETEKMARRRVRNLADYRNSLLELTSLVDDIDRLKYSYFQSAYDVAETTSNEMLQLAASVVRAEVEIYEGIARKGWSGGGLEDLISTCPDPFTVDNDDDDPINGSNTISSSSSKSGGISGLYGLIAGSGSTNGSSNAASGHGYRDDKSGSTFKRPSTASGTSSHKTPKQIFSILPSNSILPQSHNSVADNSEDNDPGDNEDDDDDDEAENDDVGTIKKKDRQPYDDGEINNLDSPSHLQETNENGYETKTEEDNEDINNHNNNNNDTYNTTSSSESPKDDSFYIERNDFSAGPSDSRILSSHGWKSQEFKTGSLESPTTPHRPDDDLDEVITDFSRIPTLTSTPIAAKRSFSSDDLDEAIKSPHKHMEVGTTFY
SIO_010081: AWJ20_369
subclass of: SO_0000673
so part of: AWJ20_369
location: 1199861..1201993
location: region:1199861-1201993:1
so has part: feature:1199861-1201993:1:exon

XP_018734608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1199861-1201993:1:exon

AWJ20_370
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TRM5
locus tag: AWJ20_370
so part of: sequence
location: complement(<1202211..>1203614)
location: region:1202211-1203614:-1
so has part: feature:1202211-1203614:-1:exon
subclass of: SO_0000010

30035750
type: Gene
SIO_000068: ncbigene

position:1202211:-1
position: 1202211
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1203614:-1
position: 1203614
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202211-1203614:-1:exon

AWJ20_370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TRM5
locus tag: AWJ20_370
product: Trm5p
transcript id: XM_018880728.1
SIO_010081: AWJ20_370
subclass of: SO_0000673
so part of: AWJ20_370
location: complement(<1202211..>1203614)
location: region:1202211-1203614:-1
so has part: feature:1202211-1203614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1202211-1203614:-1:exon

AWJ20_370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TRM5
locus tag: AWJ20_370
inference: similar to AA sequence:KEGG_Orthology:K15429
note: tRNA(m(1)G37)methyltransferase; methylates a tRNA base adjacent to the anticodon that has a role in prevention of frameshifting; highly conserved across Archaea, Bacteria, and Eukarya; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 17652090]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA,IEA]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IDA] [PMID 17652090]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 14562095]; GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_function: GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]; GO_function: GO:0016423 - tRNA (guanine) methyltransferase activity [Evidence IGI,IMP,ISS] [PMID 11226173]; GO_function: GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA,IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA,IEA]; GO_process: GO:0032259 - methylation [Evidence IEA]; GO_process: GO:0030488 - tRNA methylation [Evidence IEA,IEA]; GO_process: GO:0030488 - tRNA methylation [Evidence IGI,IMP,ISS] [PMID 11226173]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]
codon start: 1
product: Trm5p
translation: MSASESVAKKQKTDRREWVRDFHPPVHRGMMELDKSAFTVKVPLVAALLKDQSFFASLVKNSRSDLLQLQGISRIVEWENNQKAILLRHDINSPDKVPQAVTPTTLDVLTKAEATYHPYTLNLDYDYWRAEDILESVLPEDLLNEVPTGFTVVGHIAHMNIREEYMPYRFLIGQVILDKNPLVETVVNKLDSIHAVYRTFDMEVLAGKEEFEVEQSESGCRFRFNFKAVYWNSRLHTEHARLISQFNKGEAVCDVFAGVGPFAVPAGKKGVIVFANDLNPHSYESMVGNIKLNKVDRTVFPTNEDGREYIKKSSQMLVDFAAKNPVIEIPPKRVSRSKPETSIPEKIPVPTHFKHYVMNLPDSAIEFLDGFIGLYRDLSLRQAAFGTDTPTSQQMPIINVHCFHKHEPDEPEPEPAQIHEDLRARVSKNLSFQIALSELSFHKVRKVAPTKTMYCISFRLPLPVALA
SIO_010081: AWJ20_370
subclass of: SO_0000673
so part of: AWJ20_370
location: complement(1202211..1203614)
location: region:1202211-1203614:-1
so has part: feature:1202211-1203614:-1:exon

XP_018734609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1202211-1203614:-1:exon

AWJ20_371
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: OMS1
locus tag: AWJ20_371
so part of: sequence
location: <1204497..>1205531
location: region:1204497-1205531:1
so has part: feature:1204497-1205531:1:exon
subclass of: SO_0000010

30035761
type: Gene
SIO_000068: ncbigene

position:1204497:1
position: 1204497
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1205531:1
position: 1205531
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204497-1205531:1:exon

AWJ20_371
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: OMS1
locus tag: AWJ20_371
product: Oms1p
transcript id: XM_018880732.1
SIO_010081: AWJ20_371
subclass of: SO_0000673
so part of: AWJ20_371
location: <1204497..>1205531
location: region:1204497-1205531:1
so has part: feature:1204497-1205531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1204497-1205531:1:exon

AWJ20_371
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: OMS1
locus tag: AWJ20_371
inference: similar to AA sequence:KEGG_Orthology:K17803
note: Protein integral to the mitochondrial membrane; has a conserved methyltransferase motif; multicopy suppressor of respiratory defects caused by OXA1 mutations; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005740 - mitochondrial envelope [Evidence IDA] [PMID 15355998]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence ISS] [PMID 9873020]; GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0032259 - methylation [Evidence IEA]
codon start: 1
product: Oms1p
translation: MNSSRILSLSSQLSYTTLNTPVISPITQTPLLARYASSARGPIRPAKVTNNPTWIKKLKLRWRKMDDDPVARKRFAMAVIAFYMITGFFGFQYLQDTKYRATGEANPYKPMDGSSADSTTKAAGTESAPGIVEPRDTTDVYESLAKEYDDKIWLEELTSYIWWTRRRLMRAVEGDALEVSCGTGRNIKYLDPKKVNSITYLDSSPAMLEVTKEKFEKRFPNYKNVQYVKGRAEDLVAIAAKSGQKFNTIFESFGLCSHEDPAKALQNFRQLLKPNGRIVLLEHGRSTYASVNERMDRTAEKRAQEWGCRWNLDIDHIVKSSGLQIVDEGRYHFGSTYFYILKAA
SIO_010081: AWJ20_371
subclass of: SO_0000673
so part of: AWJ20_371
location: 1204497..1205531
location: region:1204497-1205531:1
so has part: feature:1204497-1205531:1:exon

XP_018734610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1204497-1205531:1:exon

AWJ20_372
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RRP4
locus tag: AWJ20_372
so part of: sequence
location: complement(<1205838..>1206914)
location: region:1205838-1206914:-1
so has part: feature:1205838-1206914:-1:exon
subclass of: SO_0000010

30035772
type: Gene
SIO_000068: ncbigene

position:1205838:-1
position: 1205838
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1206914:-1
position: 1206914
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205838-1206914:-1:exon

AWJ20_372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RRP4
locus tag: AWJ20_372
product: Rrp4p
transcript id: XM_018880743.1
SIO_010081: AWJ20_372
subclass of: SO_0000673
so part of: AWJ20_372
location: complement(<1205838..>1206914)
location: region:1205838-1206914:-1
so has part: feature:1205838-1206914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205838-1206914:-1:exon

AWJ20_372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RRP4
locus tag: AWJ20_372
inference: similar to AA sequence:KEGG_Orthology:K03679
note: Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain RNA binding domains; has similarity to human hRrp4p (EXOSC2); GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0000177 - cytoplasmic exosome (RNase complex) [Evidence IDA] [PMID 10465791]; GO_component: GO:0000177 - cytoplasmic exosome (RNase complex) [Evidence IDA] [PMID 19046973]; GO_component: GO:0000178 - exosome (RNase complex) [Evidence IEA,IEA]; GO_component: GO:0000176 - nuclear exosome (RNase complex) [Evidence IDA] [PMID 10465791]; GO_component: GO:0000176 - nuclear exosome (RNase complex) [Evidence IDA] [PMID 19046973]; GO_component: GO:0005730 - nucleolus [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA,IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0034475 - U4 snRNA 3'-end processing [Evidence IMP] [PMID 10611222]; GO_process: GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 10465791]; GO_process: GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 10508172]; GO_process: GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 8600032]; GO_process: GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Evidence IMP] [PMID 9390555]; GO_process: GO:0070651 - nonfunctional rRNA decay [Evidence IC] [PMID 10465791]; GO_process: GO:0071042 - nuclear polyadenylation-dependent mRNA catabolic process [Evidence IC] [PMID 10465791]; GO_process: GO:0071035 - nuclear polyadenylation-…
codon start: 1
product: Rrp4p
translation: MPVIAISRPETVYGGVSGGNRKLKRANGGDEEDVDGVDELEYEDADSGSDAEMRDLDDDDGDANDNDKRSGFGSSTKGSSLVTPGELITEDTMWMRGHGTFSQDEKTFSSVAGTITRVNKLLSVTPLRGRYQPVIGDHVIGRITEVGNKRWKVDIGGNQDAALLLGSVNLPGGVLRRKSESDELQMRQFLKEGDLLNAEVQALFSDGGASLHTRSLRYGKLRNGMLVQVPSSLIIRLRTQLYRLPGGVDMILGINGYIWLSKSSKVAADVSITRLEETSGLEIYSDTNEEINTSTRENIARYANCIRALAFKEVGVNETRLIAAYEASLAYASAGDLIEDEVKAILAAEALAADRSDE
SIO_010081: AWJ20_372
subclass of: SO_0000673
so part of: AWJ20_372
location: complement(1205838..1206914)
location: region:1205838-1206914:-1
so has part: feature:1205838-1206914:-1:exon

XP_018734611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1205838-1206914:-1:exon

AWJ20_373
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NPL3
locus tag: AWJ20_373
so part of: sequence
location: <1207359..>1208426
location: region:1207359-1208426:1
so has part: feature:1207359-1208426:1:exon
subclass of: SO_0000010

30035783
type: Gene
SIO_000068: ncbigene

position:1207359:1
position: 1207359
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1208426:1
position: 1208426
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207359-1208426:1:exon

AWJ20_373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NPL3
locus tag: AWJ20_373
product: mRNA-binding protein NPL3
transcript id: XM_018880754.1
SIO_010081: AWJ20_373
subclass of: SO_0000673
so part of: AWJ20_373
location: <1207359..>1208426
location: region:1207359-1208426:1
so has part: feature:1207359-1208426:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207359-1208426:1:exon

AWJ20_373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NPL3
locus tag: AWJ20_373
inference: similar to AA sequence:KEGG_Orthology:K14651
codon start: 1
product: mRNA-binding protein NPL3
translation: MSELDLARLFVRPVGPDVSKEELEDVFRAYGEVSEVKLMRGYAFVEFGNEEEAKAARDGLNETDFHGQNFQIEYAKPKPTPRERDEYNSAKFGGGKRYRVLVSNLGEDASWQDLKDFARDNNIQGVNYADVSRARDGTGVIDFVSQADLEDGLSKLDGLEFKGSTISASEDPNPPPLPSGPPRFRDSYGRGDRGGRYGDRRGGDRDYDRRGGDRGYDRYDRRGGDRGYDRGDRYDRRGGDRDFDRRDRGGDRDFDRRDRGGDRDYDRRDRGGRDFDRRDRGGRDFERRDRGGRDYERRDRGSDRRESRGGRDDDETYTRQRSQSPPRYANGARERDDDVPVHDAEPAHDDAEGTW
SIO_010081: AWJ20_373
subclass of: SO_0000673
so part of: AWJ20_373
location: 1207359..1208426
location: region:1207359-1208426:1
so has part: feature:1207359-1208426:1:exon

XP_018734612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1207359-1208426:1:exon

AWJ20_374
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_374
so part of: sequence
location: complement(<1210128..>1212140)
location: region:1210128-1212140:-1
so has part: feature:1210128-1212140:-1:exon
subclass of: SO_0000010

30035794
type: Gene
SIO_000068: ncbigene

position:1210128:-1
position: 1210128
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1212140:-1
position: 1212140
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210128-1212140:-1:exon

AWJ20_374
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_374
product: hypothetical protein
transcript id: XM_018880765.1
SIO_010081: AWJ20_374
subclass of: SO_0000673
so part of: AWJ20_374
location: complement(<1210128..>1212140)
location: region:1210128-1212140:-1
so has part: feature:1210128-1212140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1210128-1212140:-1:exon

AWJ20_374
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_374
codon start: 1
product: hypothetical protein
translation: MKSFSETSPTTRKKLIALVAAFFASLACGTNYVYSTYSTQLADRIGMTATQSSILGMAGQIGLSLFGPVTGLIIDRYPPMFPIVMGGIFISTGYRTMYTSYVDANDNFTLLVLAYGLAGLGNTLVFNTSVRTSAINWPNRRGTATSLPMSAFGLSALFFSSVAGIIFPGDTQGFLELLSMLTGGLVLLCFPFIRVHRKRKPPAAATVSRGRHGYTEIGDGHGSTGHGGEDDGPSHFSIAQPSSPIQSDEDDDEFDDGYVDESIIEGDEESQGRELQEEYRHSSESTVGKDGVLTSTNQSTSLLSDDSLSGNSTDYASHRNSDVDGAGTTTASDAGTKNGAASSSAGSTTAHVHGHYHTHEQPGRIPGSPAIPPHVFSSDLRPTTSPFNRSSSPNFGSRLRPTNSSQTAFSTNIFPTVSSTSRIHHHGHGKHPHQDVGIKLLFRRDFWEYFFLLGFVSGVGQMYIYSCGYCVRALVHYSNPEFSPGKVQSLQALQVALISSMNFLGRITSGSASDWLVHKLNVQRLWVLVVALTIGLFGHILAIYLTNPMLMWIVSLSIGLSYGLVFGVYPSIVSESFGLKHFSQNWGYVASSPVFSSYFLNLMFGKIFDANSSTKVEGSAAHICLKGPGCYSLAFTITSCVSVVGIALALFMIYTRKDSKPHELGEEEHF
SIO_010081: AWJ20_374
subclass of: SO_0000673
so part of: AWJ20_374
location: complement(1210128..1212140)
location: region:1210128-1212140:-1
so has part: feature:1210128-1212140:-1:exon

XP_018734613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1210128-1212140:-1:exon

AWJ20_375
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: UBX3
locus tag: AWJ20_375
so part of: sequence
location: complement(<1215043..>1216905)
location: region:1215043-1216905:-1
so has part: feature:1215043-1216905:-1:exon
subclass of: SO_0000010

30035805
type: Gene
SIO_000068: ncbigene

position:1215043:-1
position: 1215043
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1216905:-1
position: 1216905
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215043-1216905:-1:exon

AWJ20_375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: UBX3
locus tag: AWJ20_375
product: Ubx3p
transcript id: XM_018880776.1
SIO_010081: AWJ20_375
subclass of: SO_0000673
so part of: AWJ20_375
location: complement(<1215043..>1216905)
location: region:1215043-1216905:-1
so has part: feature:1215043-1216905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1215043-1216905:-1:exon

AWJ20_375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: UBX3
locus tag: AWJ20_375
inference: similar to AA sequence:KEGG_Orthology:K18726
note: Subunit of the DSC ubiquitin ligase complex; UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; ortholog of fission yeast Ucp10; GO_component: GO:0044695 - Dsc E3 ubiquitin ligase complex [Evidence IDA] [PMID 22681890]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]
codon start: 1
product: Ubx3p
translation: MSTTVPEGLTGSQQEAFQAFVDITNWSQDPQLAVVLLRSCEWNVEQAVTAHFDGTIMDEDDTPDTGSQAGDVGSLNSGISNGGSLRSQQRSDHQQPTSIMQELDEQELYESTNIAPRVNPTPPIYAARTGVNGGGVSIIQTVLLFPFNVGYKALNTLLYFLSWLFPFLPRLTGYYPANRAARHTGSETGDYAKNAAARFIRSFEENYGTGRAVSSTSGTGSSSTGASGTGGAGAGDSTISDANAGESSSSSGGIDNNSIDNNEDSSVSGSILPFFLGGYTEALEKAKTDLKYLVVVLQSEEHDLTADFNRNVLLSPQVIDLLKREDIIFWAGNVKESEAYQVASGLEVTKFPFCALIAPSPRTPTSSVLVMTVLCKLQGATMDSNEFVSEIEERMEAHSPKILALVLDKQERDTSRRLREEQDSAYERSLQADRERLRKQEEERKKADEERERQEREAREAQEKEDLLQRNQTQWRQWRAQQLRKKLDLVSPSSGANTPSLSSSPSSTTNAAVAGARPARISLRLLSGERVVQLFSPTDTLEDLYAFVECHELLKEPAPTTETTAPPDFTFTYNFQLSTPMPRKVLEPSTDIHIADERSVYPSGSVLVETADPDDDEDNE
SIO_010081: AWJ20_375
subclass of: SO_0000673
so part of: AWJ20_375
location: complement(1215043..1216905)
location: region:1215043-1216905:-1
so has part: feature:1215043-1216905:-1:exon

XP_018734614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1215043-1216905:-1:exon

AWJ20_376
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PIF1
locus tag: AWJ20_376
so part of: sequence
location: complement(<1217195..>1220254)
location: region:1217195-1220254:-1
so has part: feature:1217195-1220254:-1:exon
subclass of: SO_0000010

30035816
type: Gene
SIO_000068: ncbigene

position:1217195:-1
position: 1217195
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1220254:-1
position: 1220254
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217195-1220254:-1:exon

AWJ20_376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PIF1
locus tag: AWJ20_376
product: DNA helicase PIF1
transcript id: XM_018880787.1
SIO_010081: AWJ20_376
subclass of: SO_0000673
so part of: AWJ20_376
location: complement(<1217195..>1220254)
location: region:1217195-1220254:-1
so has part: feature:1217195-1220254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217195-1220254:-1:exon

AWJ20_376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PIF1
locus tag: AWJ20_376
inference: similar to AA sequence:KEGG_Orthology:K15255
codon start: 1
product: DNA helicase PIF1
translation: MSKHNNVELPQDDGQFVDSRTGFAISLRDLESSSPISSDIRGVFGNDEFSAKENIENAYDKNGSITHVFEADAASPTRKAPFDLGIHSSDFSSDDVLDLESFAKSELSPVRTNVNTLPKEKSEFPSIYPPRMSRDATSPLKERIQSSPLSKGAILRESRKSQESSVDMFKLELDVGLHHFSQTSKPDTIEIKENIEGSKVISYSIDNNRGPLLSSPTKPSQMPQPPQPSQPLQPLKHEQPLQPLPQQLSQISQPSQPLQPLKNPQFSQISQLHSTPVAWSSSPDYHKTETLATLHAKNAEKRDESTRSTGIVTNENNEPKPVMEIVTIENGTTEYNDTDNLLGPPRAPLSTPAKKQIWNQPVAITRAARAELRKANMQQKRNVSSVREEYVPEEIENAPSIEEPHKRPSRISLPHLKKRKVDKFFLSQEQKQILDMVVHQEHNMFFTGAAGTGKSVLLERIITDLRRKYSPGAVAVTASTGLAACHIGGVTLHNFSGIGLGREDVDTLVKKIRRNRKCFKRWKETRVLVIDEISMIDGDLFDKLEQIARRLRTGADKHKPFGGIQVVITGDFFQLPPVPDRKTSGEQKEFKFCFEAEYWPEVITQNYVLKQVFRQKDNTFSTMLNEMRRGDMSDHTIRTFESLSRPLKDIPAGLTPTELFPMRHQVERANRSRSDLLSGISHIFEATDKQKEPSMEHVFNLNNLMAVEKLELKIGSQVMMIKNVDETLVNGSLGTVIGFMDDHHFMLYGENKGIDLSTQEIRDAHAGKLDLKGDTPPPTTATTNEFDDDDVFGIPSDEEVERDSLSVNWKRKKAKLRLLQYTDPSTGKQSGKLWPLVRFKLTDGTTRDVLVQEETWTLENQEGIVMASRAQVPLILAWALSIHKAQGQTLEYVKIDLRKAFEKGQAYVAISRATRLDGLQVSGFSRDKVMVHRKVVDFYDSLASLSNEENDDNFANQTTTTHDPEPTTTTKHKRSLLKQDYTYVPPKQQLRFDDFKPQPTPEVITRVGSANAASRSSRI
SIO_010081: AWJ20_376
subclass of: SO_0000673
so part of: AWJ20_376
location: complement(1217195..1220254)
location: region:1217195-1220254:-1
so has part: feature:1217195-1220254:-1:exon

XP_018734615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1217195-1220254:-1:exon

AWJ20_377
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: OGG1
locus tag: AWJ20_377
so part of: sequence
location: <1221114..>1222193
location: region:1221114-1222193:1
so has part: feature:1221114-1222193:1:exon
subclass of: SO_0000010

30035827
type: Gene
SIO_000068: ncbigene

position:1221114:1
position: 1221114
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1222193:1
position: 1222193
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221114-1222193:1:exon

AWJ20_377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: OGG1
locus tag: AWJ20_377
product: 8-oxoguanine glycosylase OGG1
transcript id: XM_018880798.1
SIO_010081: AWJ20_377
subclass of: SO_0000673
so part of: AWJ20_377
location: <1221114..>1222193
location: region:1221114-1222193:1
so has part: feature:1221114-1222193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221114-1222193:1:exon

AWJ20_377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: OGG1
locus tag: AWJ20_377
inference: similar to AA sequence:KEGG_Orthology:K03660
note: Nuclear and mitochondrial glycosylase/lyase; specifically excises 7,8-dihydro-8-oxoguanine residues located opposite cytosine or thymine residues in DNA, repairs oxidative damage to mitochondrial DNA, contributes to UVA resistance; GO_component: GO:0031518 - CBF3 complex [Evidence IDA] [PMID 19882662]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 11239005]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 11239005]; GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic site) lyase activity [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA,IEA]; GO_function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_function: GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO_function: GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IDA] [PMID 8643552]; GO_process: GO:0000737 - DNA catabolic process, endonucleolytic [Evidence IEA,IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA,IEA]; GO_process: GO:0006281 - DNA repair [Evidence IMP] [PMID 11239005]; GO_process: GO:0006284 - base-excision repair [Evidence IEA]; GO_process: GO:0006285 - base-excision repair, AP site formation [Evidence IDA] [PMID 8643552]; GO_process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO_process: GO:0070987 - error-free translesion synthesis [Evidence IGI] [PMID 19264809]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0006289 - nucleotide-excision repair [Evidence IEA]; GO_process: GO:0007004 - telomere maintenance via telomerase [Evidence IMP] [PMID 19942858]
codon start: 1
product: 8-oxoguanine glycosylase OGG1
translation: MAYKGRVIFLRQEQDKLYYSSLFPKGKTEPELDSSTGKSSTTKSTTTAASTATDTSPELFSSATSTLALINDYFNLDVKLSSLYSDWAKCDSHFSKKSGEFPGIRILRQDPWENVCSFICSTNNNIKRISQMVDNLCIHFGDYIATHEGVAYYDFPKPHQLNDPSVEAKLRSLGFGYRAKYIYKTAVMVSTPTDSSSDGLPALFNLRNLSYEEAHEELLKFSGVGPKVADCVCLMSLDKHDCVPVDTHVWQIAQRDYKYGRKYKTLNKVAYDDIRIFFRDLWGPYAGWAHSVLFTADLRDLNNGVNTTTTPTPPPAEGKPVKQEHKILTDDQPHPKRLKTTSPNILKRGRPAVVKVEAN
SIO_010081: AWJ20_377
subclass of: SO_0000673
so part of: AWJ20_377
location: 1221114..1222193
location: region:1221114-1222193:1
so has part: feature:1221114-1222193:1:exon

XP_018734616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221114-1222193:1:exon

AWJ20_378
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BUD13
locus tag: AWJ20_378
so part of: sequence
location: <1222482..>1223486
location: region:1222482-1223486:1
so has part: feature:1222482-1223486:1:exon
subclass of: SO_0000010

30035838
type: Gene
SIO_000068: ncbigene

position:1222482:1
position: 1222482
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1223486:1
position: 1223486
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222482-1223486:1:exon

AWJ20_378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BUD13
locus tag: AWJ20_378
product: Bud13p
transcript id: XM_018880809.1
SIO_010081: AWJ20_378
subclass of: SO_0000673
so part of: AWJ20_378
location: <1222482..>1223486
location: region:1222482-1223486:1
so has part: feature:1222482-1223486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1222482-1223486:1:exon

AWJ20_378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BUD13
locus tag: AWJ20_378
inference: similar to AA sequence:KEGG_Orthology:K13106
note: Subunit of the RES complex; RES complex is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern due to a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids; GO_component: GO:0070274 - RES complex [Evidence IDA] [PMID 15565172]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 11452010]; GO_component: GO:0005681 - spliceosomal complex [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008380 - RNA splicing [Evidence IEA]; GO_process: GO:0000282 - cellular bud site selection [Evidence IMP] [PMID 11452010]; GO_process: GO:0006406 - mRNA export from nucleus [Evidence IMP] [PMID 15565172]; GO_process: GO:0006397 - mRNA processing [Evidence IEA]; GO_process: GO:0000398 - mRNA splicing, via spliceosome [Evidence IDA] [PMID 15565172]
codon start: 1
product: Bud13p
translation: MSLADYLAKNYLSADKKPKKKKKKSEKTASHAESAVVLENEDVLGWEGTPVGASFEQEDDDEDLGLPQTTGKEAKEPRWKRLGGKSGDYTSLSQAKIQKEPELDVGSRRSGVEQGREEDSEDPSTMMSNGARAGLQTAEQVREAMEKRQQAELARFLNDDDALSRQNAKTIYRDASGRVIDLAAQNNEKAKQEALEKVKKEARQRERQLGAVQKLNQEAHRQQLSEAGTSSINIHADDRELNEEQKSQYRFNDPAARFSRSVKQQKEQSHGQTRTSATGLPNYRGPYNPNRFNIPPGVKWDGVDRSNGFEALYLKKQNERREKKALSYSMAIDD
SIO_010081: AWJ20_378
subclass of: SO_0000673
so part of: AWJ20_378
location: 1222482..1223486
location: region:1222482-1223486:1
so has part: feature:1222482-1223486:1:exon

XP_018734617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1222482-1223486:1:exon

AWJ20_379
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: XRN1
locus tag: AWJ20_379
so part of: sequence
location: complement(<1223675..>1228129)
location: region:1223675-1228129:-1
so has part: feature:1223675-1228129:-1:exon
subclass of: SO_0000010

30035849
type: Gene
SIO_000068: ncbigene

position:1223675:-1
position: 1223675
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1228129:-1
position: 1228129
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223675-1228129:-1:exon

AWJ20_379
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: XRN1
locus tag: AWJ20_379
product: chromatin-binding exonuclease XRN1
transcript id: XM_018880820.1
SIO_010081: AWJ20_379
subclass of: SO_0000673
so part of: AWJ20_379
location: complement(<1223675..>1228129)
location: region:1223675-1228129:-1
so has part: feature:1223675-1228129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223675-1228129:-1:exon

AWJ20_379
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: XRN1
locus tag: AWJ20_379
inference: similar to AA sequence:KEGG_Orthology:K12618
codon start: 1
product: chromatin-binding exonuclease XRN1
translation: MAVDGVAPRAKMNQQRSRRFRSALDAERARRKAIESGVELPSNDPFDSNAITPGTEFMAKLTKQLKYFINKKVSEDTAWQGIEIILSGHEVPGEGEHKIMEHIRNAKAQEGYPSNVRHCLYGLDADLIMLGLLSHEPHFALLREEVTFGRSSKKSTELTDQRFFLLHLSLVREYLEIEFDDVRDDTAFPFDFERVLDDFILINFFIGNDFLPELPTLLINEGALPTVLQTYKHVLKTADGYISDAGVINFERLGIWLDEMSKFEYKKFEDSSIDVEWFNEDLQTVSVTGEEKEKASAKLSLTAKQKELVRLVKPFILTANSTGKPSASTATSADASAAVSTSASASASSTSLNVPPTPVSPAVPEFTLPADINPDDIHFLQRVGERTYTRVVEDKGRYSLVLDVDGLPDSEDEDEETHRILSLHRVLKKYENAEVKKEDVEEHKKEVYSAKFDQWRNNYYKSKFGITLKDEDKIRDMASNYLEGLQWVLYYYYKGCASWGWYFRYHYAPRITDMKKGLKSKFEFEKGKPFRPFEQLMGVLPDRSKNLVPPAYRPLMSDELSPIIDFYPREFDLDMNGKKNDWEAVVKIPFVDEKRLLAALESKESQLTADEKARNGFGTNIQFVFNPQTDYLYPSSLPGTFLDIPHCHSIEVILDPPTNNGRQYVNGLCEGVKLGKNSLAGFPSLKTLEYETRLEAAGVKVFQQPSRNESIMVYLKNSYANDTPATVAEKLLGDSVYVGWPYLREAKLVAVSDELFRYEKVDGQVSNYPHSQHTLGSWGKTNARTIEQYGNMGTKIGKVSIVAHVQKIQGLRRTSDGAYLKEFANDESTEETFPIQTIVEDVTEHDQRYVERPSLPVETEFPTGSQAIYLGPLGYGNPVTVNGHGHNTVEVLLKKLQRGEPGIGTRAADFEKQNIRYLASYEVSRSLSIHPLFLSKITSKYLVEYENKKYDLGLMLKMEARREKVLGYSRKSQRGWEYSYAAVNLIKDYRTAYPFVLSSLQALTGSSIPDMGRVLKMPKEQIKPLLEEMVKWIKVHTIEKPDFTRVALESDALSTISVKKIEAYIRKYFQQEDPVKDVLIKATPRGALLAPSQAYHQLRNQRFNLGDRVVSALSHGKVKLYSRGTVIGINSSTLKVTLDVLFDDDFDAGSNLGGKLDSNRGLTVEAGSVVNLTNRQLLFEPKGSKASKQQQQQQQQQSKSAGKQAAKPSKPVPSAWSQGQKPLTIGSQSQPSPATKGKKPPVAPVAPAATAATAPAAAKAAATAQKPSSSPAPKKILQKPQPTPSAAPSAPAAPAAAAPADSEKQMSKDLLSLIQNSAPKATPKSNNEVLDNIKATSKSQKKSQLNLMNTLVGHYGSTLPPPPPQGQMPPPPPFGFPPVPPPGVFGGMPPVPPPQFYPPPPSMIPHPFAGHGPIPGQPAPSQDPNGNVPQPATFDEQASADLMSTLSIGSKPNGSNSTRGGRGRGGRGGRGGRGSRGRGAKSSA
SIO_010081: AWJ20_379
subclass of: SO_0000673
so part of: AWJ20_379
location: complement(1223675..1228129)
location: region:1223675-1228129:-1
so has part: feature:1223675-1228129:-1:exon

XP_018734618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1223675-1228129:-1:exon

AWJ20_380
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_380
so part of: sequence
location: <1230438..>1232084
location: region:1230438-1232084:1
so has part: feature:1230438-1232084:1:exon
subclass of: SO_0000010

30035861
type: Gene
SIO_000068: ncbigene

position:1230438:1
position: 1230438
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1232084:1
position: 1232084
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230438-1232084:1:exon

AWJ20_380
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_380
product: hypothetical protein
transcript id: XM_018880831.1
SIO_010081: AWJ20_380
subclass of: SO_0000673
so part of: AWJ20_380
location: <1230438..>1232084
location: region:1230438-1232084:1
so has part: feature:1230438-1232084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230438-1232084:1:exon

AWJ20_380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_380
codon start: 1
product: hypothetical protein
translation: MSLNEQSFARAPAANVEARSGRAPQIGIYRSASSGPSSTTSSSPEPGHHAHVHGHARESEYELRRVSHENGFLSSSSSSSGSVPAVASAPRLSAASSTSGIIRLAGIDRSASYSKTPTRRTPQPGATDPAVESDTPTKKKGRRGGLTGRERERDRERERDRDRDRDRERERERERDREREREKDKSSPQSLKDIETRLTRQLTAFCDKVSQQIKEQNISIEHLSRRVSLLEDSQQKKGLDREFKEILTEQEKLFEIYSKNILRSVSQQINKTRSPENSSTRNNNSSSNSSHSSSGTNNSSNSSNSSNSNNNSNNSNNTNIQGGSSRSIRASGNSNESTRTGAGEVSFDEEHDTLGDIEVDGNEYSSDDKSKHRHKSGSASPVADSGASFDAPPPGTPYVLVRRSDDQKIRNRGILQARINRKLKKTGVVAIERKIDNRKEVRVYLVDPVDTFDDSFSQWLYIIPNHVDVITASTWIEEHVHLPTDLAMPEIRQTIESALNIRLATDPRPSDNSSESQKGSTFLAFRSTTDRDLALANLPTLFNTTPSV
SIO_010081: AWJ20_380
subclass of: SO_0000673
so part of: AWJ20_380
location: 1230438..1232084
location: region:1230438-1232084:1
so has part: feature:1230438-1232084:1:exon

XP_018734619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1230438-1232084:1:exon

AWJ20_381
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NUP49
locus tag: AWJ20_381
so part of: sequence
location: <1232454..>1233995
location: region:1232454-1233995:1
so has part: feature:1232454-1233995:1:exon
subclass of: SO_0000010

30035872
type: Gene
SIO_000068: ncbigene

position:1232454:1
position: 1232454
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1233995:1
position: 1233995
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232454-1233995:1:exon

AWJ20_381
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NUP49
locus tag: AWJ20_381
product: FG-nucleoporin NUP49
transcript id: XM_018880841.1
SIO_010081: AWJ20_381
subclass of: SO_0000673
so part of: AWJ20_381
location: <1232454..>1233995
location: region:1232454-1233995:1
so has part: feature:1232454-1233995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1232454-1233995:1:exon

AWJ20_381
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NUP49
locus tag: AWJ20_381
inference: similar to AA sequence:KEGG_Orthology:K14307
codon start: 1
product: FG-nucleoporin NUP49
translation: MFGSTQTANNAGTGAFGANTGFGGATNTGGFGAGTGSTGFSLGGNTNTGSGFGAAAGANTGGGLFGQNKPVQQTASPFGAPTSTATGNTGTGLFGSNNAAGAGTGTGLFGSNTQAQSTGGLFGTKPAATTGTGLFGNNTTNTATTGTGLFGQPQQQQQQQQTTSLFGQPQQQQQPQQQATTSLFGTNTQQQQQQPQQTTSLFGQPQQQQQQQPQTSLFGAAPAATTAQKPLFGGLNTPAAPTTSTGLFGSATNTSTTARPLFGGGLTQPSTGTPSFGLGSSFQTPQQQQQQQQQLQQPTQEITLLTRPSDLPEAAQKELEALNDYITSQGRVCEELKANQDSQDEMIRSIPRDVELLTRKLSTTKEALKYDDRVLTNIKKLAETAVHDAELCFQLLGNIRGLSGGQSLLSNSTYGNNPAAGAAKLGGRKVDQLAPYFNHKIEEFGNRLHELAAIITEVEKGVDAAELDSVDGYANVNNIVAALQEEYQLFMSLGNRVAELHHDVGRLEQQKMA
SIO_010081: AWJ20_381
subclass of: SO_0000673
so part of: AWJ20_381
location: 1232454..1233995
location: region:1232454-1233995:1
so has part: feature:1232454-1233995:1:exon

XP_018734620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1232454-1233995:1:exon

AWJ20_382
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: NTH1
locus tag: AWJ20_382
so part of: sequence
location: complement(<1234778..>1237324)
location: region:1234778-1237324:-1
so has part: feature:1234778-1237324:-1:exon
subclass of: SO_0000010

30035883
type: Gene
SIO_000068: ncbigene

position:1234778:-1
position: 1234778
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1237324:-1
position: 1237324
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234778-1237324:-1:exon

AWJ20_382
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: NTH1
locus tag: AWJ20_382
product: alpha,alpha-trehalase NTH1
transcript id: XM_018880851.1
SIO_010081: AWJ20_382
subclass of: SO_0000673
so part of: AWJ20_382
location: complement(<1234778..>1237324)
location: region:1234778-1237324:-1
so has part: feature:1234778-1237324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1234778-1237324:-1:exon

AWJ20_382
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: NTH1
locus tag: AWJ20_382
inference: similar to AA sequence:KEGG_Orthology:K01194
note: Neutral trehalase, degrades trehalose; required for thermotolerance and may mediate resistance to other cellular stresses; may be phosphorylated by Cdc28p; inhibited by Dcs1p; NTH1 has a paralog, NTH2, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA,IEA]; GO_function: GO:0004555 - alpha,alpha-trehalase activity [Evidence TAS] [PMID 9308367]; GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0005993 - trehalose catabolic process [Evidence IEA]; GO_process: GO:0005993 - trehalose catabolic process [Evidence IMP] [PMID 23597844]; GO_process: GO:0005991 - trehalose metabolic process [Evidence IEA]
codon start: 1
product: alpha,alpha-trehalase NTH1
translation: MSASDSVSPDSPLPVSPDSVSPDDTASLNSGSSSQGSGGDDPLLPPPATDDEPILWRQPKLIDNTADSAANGNGSAKSGKHHQRHISFDKSVNKNDGPSSSNPATVVLTSGVNAKHHRRSSSSEIDPYSTPAVYYNPESEKKSIRLLRSRTLSTVDRSSSDRKKWLPRRRGSKDEQLGPKKLLIHVDTTLKRLLESEDTDQNAQITIEDDGPKVLEVGTANSNGYNTTEIRGTYQLSNLLQELTLAKRFGRKYIILDEQRLTENPVARLQRLISKEFWNALTRKIDSSTIETIALDPKSRSDDKRPRVYIPFSEKKQFIFYSEIAKKNPKLDLQVEYLPENITADYVKSINDKPGLLALALDETVDENGNESYVGVPYVVPGGRFNELYGWDSYMESLGLLVDNRVDLAKGMVINFCYEIKHYGKILNANRSYYLTRSQPPFLTDMALRVYEKIKYTNGALDFLADSMRAAIKEYKTVWTAEPRLDPVTGLSRYRPDGKGIPPETEASHFEHLLFPFCKRYRMSFEEFQQKYNDGEIHEPTLDEYFLHDRAVRESGHDTTYRFEGICADLATIDLNSLLYKYETDIAHTIRNMFDDKLTMEDGTVETSAIWDRRARKRRILIDKYMWDESQGMYFDYDTKLRRRHTYESATTFWALWAGLASTKQAVRMVEESLPKFEVFGGLVSGTLASRGETGLNRPNRQWDYPYGWAPQQILAWVGLMRYGYEEEAQRLIYRWLFMITKAFVDYNGVVVEKYNVTSPEDPHRVDAEYGNQGLGFKGVATEGFGWVNASYVYGLSLLSSRFRRVLGALTPPDVFFSALRREDDEDAETLDIDGLDIGSVAKAINHS
SIO_010081: AWJ20_382
subclass of: SO_0000673
so part of: AWJ20_382
location: complement(1234778..1237324)
location: region:1234778-1237324:-1
so has part: feature:1234778-1237324:-1:exon

XP_018734621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1234778-1237324:-1:exon

AWJ20_383
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FMP41
locus tag: AWJ20_383
so part of: sequence
location: <1244056..>1244760
location: region:1244056-1244760:1
so has part: feature:1244056-1244760:1:exon
subclass of: SO_0000010

30035894
type: Gene
SIO_000068: ncbigene

position:1244056:1
position: 1244056
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1244760:1
position: 1244760
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244056-1244760:1:exon

AWJ20_383
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FMP41
locus tag: AWJ20_383
product: Fmp41p
transcript id: XM_018880862.1
SIO_010081: AWJ20_383
subclass of: SO_0000673
so part of: AWJ20_383
location: <1244056..>1244760
location: region:1244056-1244760:1
so has part: feature:1244056-1244760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1244056-1244760:1:exon

AWJ20_383
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FMP41
locus tag: AWJ20_383
note: hypothetical protein; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0006950 - response to stress [Evidence IEA]
codon start: 1
product: Fmp41p
translation: MSTAYIQRARKILCIGRNYVDHIKELGNSAPSQPFFFLKPTSSVLLPGQGPILRPKGTKLHYELELAVVLNKTLKNINPETFGEKEAIDAIEGYALALDLTARNVQDEAKKKGLPWSIAKGFDTFCPLTPLIPKSQIPDPHNAHLKLLVNGEVRQSDSTNLMLFRIPRILSAVSSVMTLEAGDIILTGTPKGVGSIVPGDNIRGELSVDGKVVPDGVLDFPVEEKPGPYEYHET
SIO_010081: AWJ20_383
subclass of: SO_0000673
so part of: AWJ20_383
location: 1244056..1244760
location: region:1244056-1244760:1
so has part: feature:1244056-1244760:1:exon

XP_018734622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244056-1244760:1:exon

AWJ20_384
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: DCD1
locus tag: AWJ20_384
so part of: sequence
location: complement(<1244931..>1246004)
location: region:1244931-1246004:-1
so has part: feature:1244931-1246004:-1:exon
subclass of: SO_0000010

30035905
type: Gene
SIO_000068: ncbigene

position:1244931:-1
position: 1244931
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1246004:-1
position: 1246004
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244931-1246004:-1:exon

AWJ20_384
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: DCD1
locus tag: AWJ20_384
product: Dcd1p
transcript id: XM_018880873.1
SIO_010081: AWJ20_384
subclass of: SO_0000673
so part of: AWJ20_384
location: complement(<1244931..>1246004)
location: region:1244931-1246004:-1
so has part: feature:1244931-1246004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1244931-1246004:-1:exon

AWJ20_384
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: DCD1
locus tag: AWJ20_384
inference: similar to AA sequence:KEGG_Orthology:K01493
note: Deoxycytidine monophosphate (dCMP) deaminase; involved in dUMP and dTMP biosynthesis; expression is NOT cell cycle regulated; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 14562095]; GO_function: GO:0003824 - catalytic activity [Evidence IEA,IEA]; GO_function: GO:0004132 - dCMP deaminase activity [Evidence IEA]; GO_function: GO:0004132 - dCMP deaminase activity [Evidence IMP] [PMID 3023902]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA,IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006231 - dTMP biosynthetic process [Evidence IMP] [PMID 6373725]; GO_process: GO:0006226 - dUMP biosynthetic process [Evidence IMP] [PMID 6373725]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0009165 - nucleotide biosynthetic process [Evidence IEA]
codon start: 1
product: Dcd1p
translation: MLIGVSGNISSGKKTVRKYLQLMGFAYLTVSDSYSDLTNGVDKWSLERPAPVKTLYSSDLPTPPESDTQQETQKRADGALEQFQSMDLLLEFATVNWSNNYVVEISDLKSFNDLCKRPFFLHVAVDAPALLRWERYQEKTKPGYHHVLTFQEFIAAGDKYLYGPASGAQLHSKAQVVIVNNTDSITELYVNIGKLNLTDPTRLRPSWDAYFMQLADLAALRSNCMKRRVGCVIVKEKRIVATGYNGTPRGLVNCNEGGCKRCNQALGSGAGLSTCLCLHAEENAILEAGRDRLGLEAIIYCNTCPCLTCSIKIVQSGIREVVYSQSYSMDSESAKVLEAGGILLRQYTPPKHGIVMS
SIO_010081: AWJ20_384
subclass of: SO_0000673
so part of: AWJ20_384
location: complement(1244931..1246004)
location: region:1244931-1246004:-1
so has part: feature:1244931-1246004:-1:exon

XP_018734623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244931-1246004:-1:exon

AWJ20_385
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_385
so part of: sequence
location: <1247067..>1249151
location: region:1247067-1249151:1
so has part: feature:1247067-1249151:1:exon
subclass of: SO_0000010

30035916
type: Gene
SIO_000068: ncbigene

position:1247067:1
position: 1247067
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1249151:1
position: 1249151
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247067-1249151:1:exon

AWJ20_385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_385
product: hypothetical protein
transcript id: XM_018880884.1
SIO_010081: AWJ20_385
subclass of: SO_0000673
so part of: AWJ20_385
location: <1247067..>1249151
location: region:1247067-1249151:1
so has part: feature:1247067-1249151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1247067-1249151:1:exon

AWJ20_385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_385
inference: similar to AA sequence:KEGG_Orthology:K03380
codon start: 1
product: hypothetical protein
translation: MVITKESNVDVLIIGAGPAGYMLANWLARTGVTNVRIIDKRSTEIFTGQADGLQCRTLEIFQSFGFADRALKEANHMLEICFWEPDKDGVIHRSGRMPDTIIGISRFQQMVIHQGRIEAWFTDAIKKWSSGKLAVERPVLPETLAIDESKVDDPEAYPVSVNLRHLKKDNALPEQFGSKISNGLFRAYDDAGDYKGDANDELETVHAKYVVGTDGAHSWTRRQIGIELEGEATDYIWGVLDAVPITNFPDIRLRCSIHSQDSGSIMIIPRENGLVRLYCQLKEAPRDEGDGSATARRMDRSKITPEFILNTAKKIFAPYTLEVTDIKWYTGYQIGQRVAKQFQKSNRVFVGGDATHTHSPKAGQGMNTSMCDTFNLGWKLAHVIKGLADPSILTTYEQERRQVARDLINFDYKFSRLFSGKPKSKDSDEGVSLEEFKKFFEKGNEFASGTIVDYDGSMLINKPKGVSASNSGHEELYLNPLAKGCPIGRRFDQAQVVMQSDCRPYYLNDMMLSDGRWRVVYFAGDIKRQTKLYDFMLKFGNYLDGKDTFVKRYTPATAQLDSVIEILLVHASERVSVEWDEFPTAFRIRDHKERMNYWKIFADDDSYHEGHGHAYNNYGVDPLFGAFVVVRPDGHVADVQELTTQGIDNIDKFFSAFMLPQTPSWTSHGGYIPSTEPEPEWYGEQDYGKPLLAV
SIO_010081: AWJ20_385
subclass of: SO_0000673
so part of: AWJ20_385
location: 1247067..1249151
location: region:1247067-1249151:1
so has part: feature:1247067-1249151:1:exon

XP_018734624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1247067-1249151:1:exon

AWJ20_386
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PSD1
locus tag: AWJ20_386
so part of: sequence
location: <1250255..>1252162
location: region:1250255-1252162:1
so has part: feature:1250255-1252162:1:exon
subclass of: SO_0000010

30035927
type: Gene
SIO_000068: ncbigene

position:1250255:1
position: 1250255
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1252162:1
position: 1252162
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1250255-1252162:1:exon

AWJ20_386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PSD1
locus tag: AWJ20_386
product: phosphatidylserine decarboxylase 1
transcript id: XM_018880895.1
SIO_010081: AWJ20_386
subclass of: SO_0000673
so part of: AWJ20_386
location: <1250255..>1252162
location: region:1250255-1252162:1
so has part: feature:1250255-1252162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1250255-1252162:1:exon

AWJ20_386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PSD1
locus tag: AWJ20_386
inference: similar to AA sequence:KEGG_Orthology:K01613
note: Phosphatidylserine decarboxylase of the mitochondrial inner membrane; converts phosphatidylserine to phosphatidylethanolamine; regulates mitochondrial fusion and morphology by affecting lipid mixing in the mitochondrial membrane and by influencing the ratio of long to short forms of Mgm1p; partly exposed to the mitochondrial intermembrane space; GO_component: GO:0031305 - integral component of mitochondrial inner membrane [Evidence IDA] [PMID 23124206]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO_function: GO:0016829 - lyase activity [Evidence IEA]; GO_function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA,IEA]; GO_function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IMP] [PMID 8407984]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0006656 - phosphatidylcholine biosynthetic process [Evidence IDA] [PMID 6427211]; GO_process: GO:0006646 - phosphatidylethanolamine biosynthetic process [Evidence IEA]; GO_process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0010636 - positive regulation of mitochondrial fusion [Evidence IMP] [PMID 23045528]; GO_process: GO:0010954 - positive regulation of protein processing [Evidence IMP] [PMID 23045528]
codon start: 1
product: phosphatidylserine decarboxylase 1
translation: MSTPSPYLIAKVARNTVATASVSATTITARVLRSSYSTSTNVVASTFGDSSHSTMSAATPLSGSGSRPFPTYKYPFPSIPRPRRNLFYYYNPMPSIKRGLSSIPDSKPGKFVRRSSAIASRFRRNSSGAQDTLNVSNTNGMPSYKTFSKFNTYGRRFASSAAGGAKKGGPGSIGLAAAQSWKWWAVPAVTSIIIWTAYRRKKQQQQQRDDETQPLLGQQEHDHKPAKPWQVAAYSTLPLKAMSRLWGKVNDITLPVWMREPGFKLYSYMFGVNLDEVAEDDLTTYRNLGEFFFRELKPGVRPIDPDAVLVSPADGQVLHLGVIDGGKVEQVKGITYSLDALLGGGNYVSAAPSHEVDFDLHEEHAIMERHKDFAVVNGISYTLDDLIGGGGSQTNVEKRTDQKVEDEGDATVASVNSSTSSFVNVSKDVLAPDFTPESEKELFFAVIYLAPGDYHRFHSPANWVAEIRRHFVGELYSVAPYFQSRLQNLFCLNERVALLGRWKHGFFSMTPVGATNVGSIIINFDKNLRTNTVYEHPNITPNSSSSSISSLPDITSSGEQTAQRKKVKKATCYEATYGKASRLLGGYPISKGEQMGGFNLGSTVVLVFEAPKTFHFNVKAGQKVKVGQALGTLPS
SIO_010081: AWJ20_386
subclass of: SO_0000673
so part of: AWJ20_386
location: 1250255..1252162
location: region:1250255-1252162:1
so has part: feature:1250255-1252162:1:exon

XP_018734625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1250255-1252162:1:exon

AWJ20_387
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: BSC6
locus tag: AWJ20_387
so part of: sequence
location: complement(<1252367..>1253797)
location: region:1252367-1253797:-1
so has part: feature:1252367-1253797:-1:exon
subclass of: SO_0000010

30035938
type: Gene
SIO_000068: ncbigene

position:1252367:-1
position: 1252367
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1253797:-1
position: 1253797
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252367-1253797:-1:exon

AWJ20_387
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: BSC6
locus tag: AWJ20_387
product: Bsc6p
transcript id: XM_018880906.1
SIO_010081: AWJ20_387
subclass of: SO_0000673
so part of: AWJ20_387
location: complement(<1252367..>1253797)
location: region:1252367-1253797:-1
so has part: feature:1252367-1253797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1252367-1253797:-1:exon

AWJ20_387
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: BSC6
locus tag: AWJ20_387
note: hypothetical protein with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; GO_component: GO:0030137 - COPI-coated vesicle [Evidence IDA] [PMID 14562095]; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA,IEA]; GO_component: GO:0030136 - clathrin-coated vesicle [Evidence IDA] [PMID 14562095]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Bsc6p
translation: MPDQTENFDNKQLGRESQMKTGDESRYETRYETENENENENENRPDDWNYPKRNLIKLIAGYYGFIVFGMADSSIGVLLPSLEQHYKIDYLVVSIAFLTPFTGYGVAALLSDKLHRMFGRWGVCTMGTICQLICYIIACTAPPYPVFVIAYGIGGFGNGCLESALNSWMGGLDHANQILGLLHGFYGLGGIICPASFTGIIGSGVKWNYCYFLMIGMSVISVVFSSIAFWGDTGAHYREKIDNSDKELASIETMTTDSILQTDKAQNQSGNNNEQDASKNKSTSMMKEVLTNQLVWLLSAVLFLYVGAEVAFGGWISTFMIKVRHGIEKKMGYVTTGFWAGLTIGRMIIGFLIGHYGAEDYFVLGFLSASIGFLLIIWLVPVLVLSAVFAGLFGVAIGPLFPTIVVAAMKKLPVRLHVSGVGFCVAIGGAGAAIPPFINGVVANKFGPRVLGPFEVVLLGLMLATWIVVIRFHPSK
SIO_010081: AWJ20_387
subclass of: SO_0000673
so part of: AWJ20_387
location: complement(1252367..1253797)
location: region:1252367-1253797:-1
so has part: feature:1252367-1253797:-1:exon

XP_018734626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1252367-1253797:-1:exon

AWJ20_388
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: APC1
locus tag: AWJ20_388
so part of: sequence
location: complement(<1254736..>1257432)
location: region:1254736-1257432:-1
so has part: feature:1254736-1257432:-1:exon
subclass of: SO_0000010

30035949
type: Gene
SIO_000068: ncbigene

position:1254736:-1
position: 1254736
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1257432:-1
position: 1257432
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254736-1257432:-1:exon

AWJ20_388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: APC1
locus tag: AWJ20_388
product: anaphase promoting complex subunit 1
transcript id: XM_018880917.1
SIO_010081: AWJ20_388
subclass of: SO_0000673
so part of: AWJ20_388
location: complement(<1254736..>1257432)
location: region:1254736-1257432:-1
so has part: feature:1254736-1257432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1254736-1257432:-1:exon

AWJ20_388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: APC1
locus tag: AWJ20_388
inference: similar to AA sequence:KEGG_Orthology:K03348
note: Largest subunit of the Anaphase-Promoting Complex/Cyclosome; APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the platform domain of the APC/C, based on structural analysis; localizes to nuclear foci that become diffuse upon DNA replication stress; GO_component: GO:0005680 - anaphase-promoting complex [Evidence IEA]; GO_component: GO:0005680 - anaphase-promoting complex [Evidence IDA] [PMID 9469814]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 22842922]; GO_component: GO:0000922 - spindle pole [Evidence IEA]; GO_function: GO:0004842 - ubiquitin-protein transferase activity [Evidence IMP] [PMID 16481473]; GO_process: GO:0031145 - anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 16481473]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0008054 - cyclin catabolic process [Evidence IMP] [PMID 8895471]; GO_process: GO:0010458 - exit from mitosis [Evidence IMP] [PMID 8895471]; GO_process: GO:0007091 - metaphase/anaphase transition of mitotic cell cycle [Evidence IMP] [PMID 8895471]; GO_process: GO:0007067 - mitotic nuclear division [Evidence IEA]; GO_process: GO:0016567 - protein ubiquitination [Evidence IEA]; GO_process: GO:0016567 - protein ubiquitination [Evidence IMP] [PMID 16481473]
codon start: 1
product: anaphase promoting complex subunit 1
translation: MIDLFSSMNEPEATVSSVLKHILELGLRHSDLDSYPEGVRIPILEIIACLKDDINSQGDVNTFMLLQRNDLLSTLNGLEKPVSYHSTKETQPQEIKTITQNVGEHEGIGAWDGQSEADRIAISRLIFSEDKRFYEVSKLLQSSRGHTATLVQPPDSNENDWLAKQQALFKATALRTYAIPFGRAALFYSSRRPLATEKYLIPRLNFNVVIRPSNVTILTPKSFLQEENLAWAHFHNGVSAGLSISTEYNHISGSWIVFNRPPSLNSQHAGFLLGLGLNGHLTKLKEWHIYNYLGPKHIPTSIALLIGMAASQMGSCDIKLTKVLSVHVAALLPMGSSDLNVSTLVQSSGLIGVGLLYCNSQHRRMSEILLSEVDTSAITQQSVEKDEGYCLAAGISLGFINIGKGNDLKGLSDVQAVERLLEMAVKTSDIQRTQNFDRSVPGALMALLFMFLKTNNKSVAEKISIPETEQRLTYIRPDFILLRTLTKSLILWDSIGQDKNWVDSAIPKILVKSNLEDISHLDGDQMVYYNMIAGLCLAMGLKYVSTADTQAKETLIWYFDQFIRLSGLSAHSKHDGLVTRQCLMNCQGVVSLALASVMAGTGDLDVLRRLRRQYGRVSKEVTFGSNMANEMAMGLLFLGGGQYSLSNSNLAIACLVVSFYPLLPTHLVDSRSHLQALRHFWVLAAEPRCLVVRNDTSKAPVSIDVVIRLKNHQIVHRKAPCLLPPLDEIMAISTNNSKYFQVNIDLTDENSPLAKAFINSRTLFVRDKMVTNSGNSSNFSATLEALIGNPHGVKASKGMNQLLSNLSSVSTLDKLQKNVLVSTEPIDDKLRSTAVDLKLTLESMAKSPLSVDDLWNLRLLFAFDDKWAGDSDVKILSKSVIDDVKLLLWKTREAISTK
SIO_010081: AWJ20_388
subclass of: SO_0000673
so part of: AWJ20_388
location: complement(1254736..1257432)
location: region:1254736-1257432:-1
so has part: feature:1254736-1257432:-1:exon

XP_018734627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1254736-1257432:-1:exon

AWJ20_389
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: APC1
locus tag: AWJ20_389
so part of: sequence
location: complement(<1257557..>1259608)
location: region:1257557-1259608:-1
so has part: feature:1257557-1259608:-1:exon
subclass of: SO_0000010

30035960
type: Gene
SIO_000068: ncbigene

position:1257557:-1
position: 1257557
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1259608:-1
position: 1259608
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257557-1259608:-1:exon

AWJ20_389
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: APC1
locus tag: AWJ20_389
product: Anaphase-promoting complex subunit 1
transcript id: XM_018880927.1
SIO_010081: AWJ20_389
subclass of: SO_0000673
so part of: AWJ20_389
location: complement(<1257557..>1259608)
location: region:1257557-1259608:-1
so has part: feature:1257557-1259608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257557-1259608:-1:exon

AWJ20_389
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: APC1
locus tag: AWJ20_389
codon start: 1
product: Anaphase-promoting complex subunit 1
translation: MAVLSIPSTGLDAVSLLGTKFCLENDNSGLPSPVSSEQLHIDNDRTSVYWIRRGIIIRKFSYHGKGFVRAAGFATFRTNEPASESTVQSDDSSGKDDSRSAVIFLADTVHIYQKDGISHSRSMPFTVSKVFPFERGLILEREMEPLTGLPSSSLLTSSRQTDPSVPKFFAMTDPILDFGLVISSSISAISPDEELMHFAPTSNSSSICVTFIPGNEHTLSSLIIYHIRHLTRAKSRSAIGTTSGTVARRRSSLKRKSASFHHGMTDDTKHPHSEQDRLRESISSPISTDRSSMSRLEVPPVAADRRTSLDPSKLESQDSQSYPLEATNLRKEIVLTKITSFDINAPRNMIKIENVLYEEDNIEVVSILNKKDSRVVNYSFRRSNGPIGIPNIEGTSVLEAKDITTIKSETNGEVLLVILSPKDQLYLYNPLLSIKSVPLMTPNHWPDISRLVSSNGNVIKVQTLDNAYRECFLTFEPKEELTKRCLNGLSLILDSVSYSFFRFLWLSSCSLKTLTDDNEWYSFMATVMCCLVNFKSDYRPDSTGVSKLGGDKSHIWPQLAGLRDGQNQRLLASVISTAYQVRNSETGSEFDFSEVRPHIILCLHIIREEFKLDVNARNQVDRLGLLISAIVESAGWSSAWVSYYETPSFKSITGKFSFIVVVYFAYILTNRLGDNYSNSTASR
SIO_010081: AWJ20_389
subclass of: SO_0000673
so part of: AWJ20_389
location: complement(1257557..1259608)
location: region:1257557-1259608:-1
so has part: feature:1257557-1259608:-1:exon

XP_018734628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1257557-1259608:-1:exon

AWJ20_390
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FMS1
locus tag: AWJ20_390
so part of: sequence
location: complement(<1259902..>1261383)
location: region:1259902-1261383:-1
so has part: feature:1259902-1261383:-1:exon
subclass of: SO_0000010

30035972
type: Gene
SIO_000068: ncbigene

position:1259902:-1
position: 1259902
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1261383:-1
position: 1261383
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259902-1261383:-1:exon

AWJ20_390
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FMS1
locus tag: AWJ20_390
product: polyamine oxidase
transcript id: XM_018880939.1
SIO_010081: AWJ20_390
subclass of: SO_0000673
so part of: AWJ20_390
location: complement(<1259902..>1261383)
location: region:1259902-1261383:-1
so has part: feature:1259902-1261383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259902-1261383:-1:exon

AWJ20_390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FMS1
locus tag: AWJ20_390
inference: similar to AA sequence:KEGG_Orthology:K13367
note: Polyamine oxidase; converts spermine to spermidine, which is required for the essential hypusination modification of translation factor eIF-5A; also involved in pantothenic acid biosynthesis; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 11914276]; GO_function: GO:0052904 - N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity [Evidence IEA]; GO_function: GO:0052903 - N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0046592 - polyamine oxidase activity [Evidence IMP] [PMID 11154694]; GO_function: GO:0046592 - polyamine oxidase activity [Evidence IDA] [PMID 21067138]; GO_function: GO:0052902 - spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity [Evidence IEA]; GO_function: GO:0052901 - spermine:oxygen oxidoreductase (spermidine-forming) activity [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0015940 - pantothenate biosynthetic process [Evidence IMP] [PMID 11154694]; GO_process: GO:0006598 - polyamine catabolic process [Evidence IGI,IMP] [PMID 12586697]
codon start: 1
product: polyamine oxidase
translation: MTKTFEETTSAIQGSKNESLITANQADDDSNYSSVIIIGSGISGVKCAVDLTNKNIDVRMLEAQDHVGGRLKTYRDDEGRHYDLGASWLHDTLQNELFEHAIDLGCKLYYDDGDWGWYTNQGERIPNSLKAQRVVFDAEHKIQLAYEDLTLPDKSLKEFTEEFVQTHPLITEEQKVLAPQMMRYLELWHAIPWDRVSAKYGIPEHFGRDAFVTSGYDKIFTSVYEQIDRTNLKLHLNSEVINISRANDKERLYTVKTKSGETYTSKYVLVTIPAGALKYTHQDLFAPNLLPKPLETVIHEMELAALGKFVLEFESVFWPEDLDNMVSLGNDALKSLTPGAHPLVFTNGKPLFGRNCLLALTSPPLTHYLEANPDKVYDFFEPALKGFRVDKSKPLPKMTFLLATDWTQNKYFRASYSALLVGQDYYNNILPFIDGADRLRFAGEHTTHDANGCVQGAYATGRREAEYILADMKGDALPYKIRESLENVNLNGK
SIO_010081: AWJ20_390
subclass of: SO_0000673
so part of: AWJ20_390
location: complement(1259902..1261383)
location: region:1259902-1261383:-1
so has part: feature:1259902-1261383:-1:exon

XP_018734629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1259902-1261383:-1:exon

AWJ20_391
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_391
so part of: sequence
location: <1262344..>1264959
location: region:1262344-1264959:1
so has part: feature:1262344-1264959:1:exon
subclass of: SO_0000010

30035983
type: Gene
SIO_000068: ncbigene

position:1262344:1
position: 1262344
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1264959:1
position: 1264959
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262344-1264959:1:exon

AWJ20_391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_391
product: Uncharacterized protein C2orf16
transcript id: XM_018880949.1
SIO_010081: AWJ20_391
subclass of: SO_0000673
so part of: AWJ20_391
location: <1262344..>1264959
location: region:1262344-1264959:1
so has part: feature:1262344-1264959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1262344-1264959:1:exon

AWJ20_391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_391
codon start: 1
product: Uncharacterized protein C2orf16
translation: MVIAQFDKCPSEDNGCKCNLLYALSSGCPQQCASAGGQVMKENSAVTELCGPNDIKAATLGFGHLLPFFDARGSSGDEYYDYGSNDFDDDDDDECDNGDDSDDGSQWHQPKPPPIPSPLPPPPPPPPSLPNYHYPPVEYMMPHASDEGYPPPPPPGYYGAPPPPPTQYYGDARYGPPPPPSAPYYGEAAYENYREYPNGRHEEQQDDEECDGSSNEANTGYYEFNSEYESWSEPWTQADIIPAEIKDVIDSIHIAGVESEPVVEDQAIDGFDNERIASVQGIIPGLPRLRKWLRAKKQNIEEFTSEDDNNGQSQSMSMSMYSTISMLPSSTAHSTVMPASVVVTSSPVATSSMSNSMTISPEETSSMTEECDAECMAALKAKNEQMAEENGITDRIQNRLHEDDDCDYECQALRAQGGGCIAGEGCNFLPDFKEKFHGNEEEDCDEDGCKENDNNNNSDATTGSGLSKDRAGMLHKLPNLKDKFHVCDPDNEDCMAREADESPRESLKQVQPDAKDRAPTQQNQVGEQVEEPTQSKEEVVGEPVQQPAEQVTEQPNEHSKGQPKEQPKDQSKEQPKEQSKEQPKEQPKEQPKEQPKEQPKEQPKENPKEQPKEQPKEQPKEQPKEQPKEQPNEQLIEQPQEQPKEQPKEQPKEQPKEQLKEQPSSHTKEQFSSVSKEESKFVMATAPPTPPKSAQIVKLITSSSSFIRAVQPSSKPTSIGGMSNSNNDCETDDCNDNNSNNGHSMPGLSHFKEKMPSWHCAQDDPDCEALVKYIGGDLNKTNNVSGRTGAAQHHSAAAYAMANSTESSNSTRFISVSVMDDRNSTFNKLNETVNSNTNTKSAHVGASISSSTSMVLNGFTLGFGLLIAAWI
SIO_010081: AWJ20_391
subclass of: SO_0000673
so part of: AWJ20_391
location: 1262344..1264959
location: region:1262344-1264959:1
so has part: feature:1262344-1264959:1:exon

XP_018734630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1262344-1264959:1:exon

AWJ20_392
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: APC2
locus tag: AWJ20_392
so part of: sequence
location: <1265210..>1267444
location: region:1265210-1267444:1
so has part: feature:1265210-1267444:1:exon
subclass of: SO_0000010

30035994
type: Gene
SIO_000068: ncbigene

position:1265210:1
position: 1265210
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1267444:1
position: 1267444
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265210-1267444:1:exon

AWJ20_392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: APC2
locus tag: AWJ20_392
product: anaphase promoting complex subunit 2
transcript id: XM_018880960.1
SIO_010081: AWJ20_392
subclass of: SO_0000673
so part of: AWJ20_392
location: <1265210..>1267444
location: region:1265210-1267444:1
so has part: feature:1265210-1267444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265210-1267444:1:exon

AWJ20_392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: APC2
locus tag: AWJ20_392
inference: similar to AA sequence:KEGG_Orthology:K03349
note: Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the catalytic core of the APC/C; has similarity to cullin Cdc53p; GO_component: GO:0005680 - anaphase-promoting complex [Evidence IDA] [PMID 9469814]; GO_component: GO:0031461 - cullin-RING ubiquitin ligase complex [Evidence IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_function: GO:0031625 - ubiquitin protein ligase binding [Evidence IEA]; GO_function: GO:0004842 - ubiquitin-protein transferase activity [Evidence IMP] [PMID 16481473]; GO_process: GO:0031145 - anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 16481473]; GO_process: GO:0007049 - cell cycle [Evidence IEA]; GO_process: GO:0051301 - cell division [Evidence IEA]; GO_process: GO:0008054 - cyclin catabolic process [Evidence IMP] [PMID 9430641]; GO_process: GO:0010458 - exit from mitosis [Evidence IGI] [PMID 9430641]; GO_process: GO:0007091 - metaphase/anaphase transition of mitotic cell cycle [Evidence IGI] [PMID 9430641]; GO_process: GO:0007067 - mitotic nuclear division [Evidence IEA]; GO_process: GO:0016567 - protein ubiquitination [Evidence IEA]; GO_process: GO:0016567 - protein ubiquitination [Evidence IMP] [PMID 16481473]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]
codon start: 1
product: anaphase promoting complex subunit 2
translation: MISAGRLGPSAFDSVFGEKPVENTYFPNTIEAVSTAWNILAQWITPKPDLQEPSQEVLAASEYLPEFESQLMEYYEDSIRKHFAEHSSFVVLNSTPASPEEDSREITRVAGTLKDAQFHYSYPLSILQFSAFARESFDRTFKSLVREYIPYHVLRVKLLNFFQQNHVVDQLEVAQAVYETFVRCGLIDESEMILAEAAMREVKFSCRELYQGQWEESVLEAFRDYIRYRFVPSLKLLLLKGRENEMKDIQQQDEQEPELLNFTSSSLISITEDVLCELRTEEIFDIIVKFPNSRPALNDLKGCLKKPAQRASIVSTFQKSCQKRLLQGSVNTVDIISAYISTVEAFSVLDPKGVLLEKVSRPIRRYLKDRDDTISVLVGGMLRSEGSELEFLSDILANTNKGDKDMETVDDLLDADWYPDPIDAPPDFMRNSNSDMLDSLISLYENKEVFVKEIVGIFADRMLSNRNSVDEVIANVQLLKLRFGDRELQNLDVMIRDMLESQKIETAVHELETGTADDEQFHATILSRLFWPSFKTHEINLPPAIEEQLKQFSGSYSQVKKNRNLQWLRNLGQVTIQLDFEDRVRSYDVTASQAAAISVFESGQHTIEQFMAALGIMEESFASSLLSFWVHKGVLVKENGQYRALERLEGDQESAGVDEVTVSSVQSAEERANEEMKVYWSYIMGMLTNLGATPIARIHSFLKVLVPAEINYTKSEDELERYLTLKVDEGELDFIGGNYKLKSS
SIO_010081: AWJ20_392
subclass of: SO_0000673
so part of: AWJ20_392
location: 1265210..1267444
location: region:1265210-1267444:1
so has part: feature:1265210-1267444:1:exon

XP_018734631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1265210-1267444:1:exon

AWJ20_393
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: cdt2
locus tag: AWJ20_393
so part of: sequence
location: complement(<1267683..>1269143)
location: region:1267683-1269143:-1
so has part: feature:1267683-1269143:-1:exon
subclass of: SO_0000010

30036005
type: Gene
SIO_000068: ncbigene

position:1267683:-1
position: 1267683
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1269143:-1
position: 1269143
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267683-1269143:-1:exon

AWJ20_393
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: cdt2
locus tag: AWJ20_393
product: WD repeat protein Cdt2
transcript id: XM_018880970.1
SIO_010081: AWJ20_393
subclass of: SO_0000673
so part of: AWJ20_393
location: complement(<1267683..>1269143)
location: region:1267683-1269143:-1
so has part: feature:1267683-1269143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267683-1269143:-1:exon

AWJ20_393
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: cdt2
locus tag: AWJ20_393
inference: similar to AA sequence:KEGG_Orthology:K11790
codon start: 1
product: WD repeat protein Cdt2
translation: MATILRARRSDSELSNTLNAPEPCLTTRPLKRPRLTTGTPDFAAHSGNSSDQGLSLSRRLMLRELGHTSTNLAWQSRWLDYSHEAKLFCSPATSSHKIQLSEFCPANAPFCIESFRTQPLTVVGFEGGDLCMLGSDTGSRQGLFLGNSRNHHNNSIFDLSISHNDSHLASTSGSLVKIYDCERNSVIHGIEAHNDGMFKQCKFHPTNSSLLLTSTRFGTIALHDLRLPTNHTDSLIELVRTKTHSHRQSFLLRKCHDVKSGATKIKRSNVSVTSLAWTEHNEYTAISGGEADSQLKFWDLRSLVSRNRQTPTCIVEPPPSPSGRKFGITSIVADPEDRKIWALCRNGVIYSYHLAAPELGLVDELASEDLSVTSFYCKLAVINPINSNRIAGKYLACGGERGLTLFSKPNTASSTSHSVLLKNGHSRETTGVSYQQCSDSLMSISDDMTLRFWRPDETLYKQLRDQKLGLESNSPNSDGAGWTEIV
SIO_010081: AWJ20_393
subclass of: SO_0000673
so part of: AWJ20_393
location: complement(1267683..1269143)
location: region:1267683-1269143:-1
so has part: feature:1267683-1269143:-1:exon

XP_018734632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1267683-1269143:-1:exon

AWJ20_394
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: COQ1
locus tag: AWJ20_394
so part of: sequence
location: complement(<1273170..>1274570)
location: region:1273170-1274570:-1
so has part: feature:1273170-1274570:-1:exon
subclass of: SO_0000010

30036016
type: Gene
SIO_000068: ncbigene

position:1273170:-1
position: 1273170
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1274570:-1
position: 1274570
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273170-1274570:-1:exon

AWJ20_394
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: COQ1
locus tag: AWJ20_394
product: trans-hexaprenyltranstransferase
transcript id: XM_018880981.1
SIO_010081: AWJ20_394
subclass of: SO_0000673
so part of: AWJ20_394
location: complement(<1273170..>1274570)
location: region:1273170-1274570:-1
so has part: feature:1273170-1274570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1273170-1274570:-1:exon

AWJ20_394
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: COQ1
locus tag: AWJ20_394
inference: similar to AA sequence:KEGG_Orthology:K05355
note: Hexaprenyl pyrophosphate synthetase; catalyzes the first step in ubiquinone (coenzyme Q) biosynthesis; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IMP] [PMID 10760477]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_function: GO:0000010 - trans-hexaprenyltranstransferase activity [Evidence IMP] [PMID 9708911]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA,IEA]; GO_process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]; GO_process: GO:0006744 - ubiquinone biosynthetic process [Evidence IMP] [PMID 9708911]
codon start: 1
product: trans-hexaprenyltranstransferase
translation: MLRLLHKGSRGFPGATAVSSASGSLNSLRFHHRRLVSSSSSRSKSLLAEAVAAASSTSSSAPSTFQTTVTDAAKLVEPDTPVNDPFSIVSKEMSTLAKNIGSLLGSGHPTLNKVAMYYFQSEGKHVRPLIVLLLSKALSEIPLSERTRGTIDTDDVSAHRPMLGEGIDDPLSPLGILHGINPEIILNPLSRPQDPLPAESNGILPKQRRLAEIVEMIHTASLLHDDVIDNSATRRSQPSGNIAFGNKMAILAGDFLLGRASVAIARIRNAEVIELLSTTIANLVEGEFMQLKNTAVDTTMEANRASFEYYIHKTYLKTASLMSKSCRAAAVLSGANDQVVEAAYAYGRNLGLCFQIVDDMLDYTIPESDLGKPAGADLKLGLATAPVLYAWEQFPELGNMIRRKFDEPGDVELARKYVAEANGVEKTRLLAVQYADEALRQLSILPESDSLAALKNLTLAILNRKK
SIO_010081: AWJ20_394
subclass of: SO_0000673
so part of: AWJ20_394
location: complement(1273170..1274570)
location: region:1273170-1274570:-1
so has part: feature:1273170-1274570:-1:exon

XP_018734633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1273170-1274570:-1:exon

AWJ20_395
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RER2
locus tag: AWJ20_395
so part of: sequence
location: <1276175..>1277113
location: region:1276175-1277113:1
so has part: feature:1276175-1277113:1:exon
subclass of: SO_0000010

30036027
type: Gene
SIO_000068: ncbigene

position:1276175:1
position: 1276175
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1277113:1
position: 1277113
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276175-1277113:1:exon

AWJ20_395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RER2
locus tag: AWJ20_395
product: Rer2p
transcript id: XM_018880991.1
SIO_010081: AWJ20_395
subclass of: SO_0000673
so part of: AWJ20_395
location: <1276175..>1277113
location: region:1276175-1277113:1
so has part: feature:1276175-1277113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1276175-1277113:1:exon

AWJ20_395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RER2
locus tag: AWJ20_395
inference: similar to AA sequence:KEGG_Orthology:K11778
note: Cis-prenyltransferase involved in dolichol synthesis; major enzyme of polyprenol synthesis in both the endoplasmic reticulum (ER) and in lipid droplets; participates in ER protein sorting; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 11442630]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 24868093]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 9858571]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0005811 - lipid particle [Evidence IDA] [PMID 24868093]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0045547 - dehydrodolichyl diphosphate synthase activity [Evidence IDA] [PMID 11442630]; GO_function: GO:0004659 - prenyltransferase activity [Evidence IDA] [PMID 17345630]; GO_function: GO:0004659 - prenyltransferase activity [Evidence IDA] [PMID 9858571]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IMP] [PMID 12911815]; GO_process: GO:0019408 - dolichol biosynthetic process [Evidence IDA] [PMID 10217761]; GO_process: GO:0006486 - protein glycosylation [Evidence IEA]; GO_process: GO:0006486 - protein glycosylation [Evidence IDA,IMP] [PMID 9858571]
codon start: 1
product: Rer2p
translation: MNIISGFPGVEYLVKRTKTFLCHVLRTGPVPGHVAIVMDGNRRFAKKRHQETWEGHNAGFETLASVLEFCYELGVQAVTVFAFSIENFKRPAYEVDALMKIVKDKLIQVCENGDLADQYGLRIRVIGNRSLLPPDVIEVAEKAEKLTRNNTKAVLNICFPYTSRDDVTNSIRRIVTRAEKGLIDPDSIDEDTIASNMYTGSCPPLDILIRTSGVERFSDFMLWESQHYTMIEFVNILWPDFNCWHMFKAILKWGLQKGNGRYNENLLANDDSDYNLTGDDTLDYDSPSTTFVGDKDTSTDYYDNDSEETVVE
SIO_010081: AWJ20_395
subclass of: SO_0000673
so part of: AWJ20_395
location: 1276175..1277113
location: region:1276175-1277113:1
so has part: feature:1276175-1277113:1:exon

XP_018734634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1276175-1277113:1:exon

AWJ20_396
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_396
so part of: sequence
location: complement(<1276384..>1276836)
location: region:1276384-1276836:-1
so has part: feature:1276384-1276836:-1:exon
subclass of: SO_0000010

30036038
type: Gene
SIO_000068: ncbigene

position:1276384:-1
position: 1276384
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1276836:-1
position: 1276836
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276384-1276836:-1:exon

AWJ20_396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_396
product: hypothetical protein
transcript id: XM_018881001.1
SIO_010081: AWJ20_396
subclass of: SO_0000673
so part of: AWJ20_396
location: complement(<1276384..>1276836)
location: region:1276384-1276836:-1
so has part: feature:1276384-1276836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1276384-1276836:-1:exon

AWJ20_396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_396
codon start: 1
product: hypothetical protein
translation: MKSLNRSTPLVRISMSKGGQLPVYMFDAMVSSSIESGSINPFSALVTIRRIEFVTSSREVYGKQMLRTALVLFRVSFSAFSATSMTSGGSNDRLPMTLIRSPYWSARSPFSHTWISLSLTIFINASTSYAGLLKFSMENANTVTACTPSS
SIO_010081: AWJ20_396
subclass of: SO_0000673
so part of: AWJ20_396
location: complement(1276384..1276836)
location: region:1276384-1276836:-1
so has part: feature:1276384-1276836:-1:exon

XP_018734635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1276384-1276836:-1:exon

AWJ20_397
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: RPL11B
locus tag: AWJ20_397
so part of: sequence
location: complement(<1277376..>1277885)
location: region:1277376-1277885:-1
so has part: feature:1277376-1277885:-1:exon
subclass of: SO_0000010

30036049
type: Gene
SIO_000068: ncbigene

position:1277376:-1
position: 1277376
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1277885:-1
position: 1277885
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277376-1277885:-1:exon

AWJ20_397
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: RPL11B
locus tag: AWJ20_397
product: ribosomal 60S subunit protein L11B
transcript id: XM_018881011.1
SIO_010081: AWJ20_397
subclass of: SO_0000673
so part of: AWJ20_397
location: complement(<1277376..>1277885)
location: region:1277376-1277885:-1
so has part: feature:1277376-1277885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1277376-1277885:-1:exon

AWJ20_397
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: RPL11B
locus tag: AWJ20_397
inference: similar to AA sequence:KEGG_Orthology:K02868
note: Ribosomal 60S subunit protein L11B; expressed at half the level of Rpl11Ap; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11B has a paralog, RPL11A, that arose from the whole genome duplication; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IDA] [PMID 11983894]; GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA,IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0019843 - rRNA binding [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IC] [PMID 11983894]; GO_process: GO:0002181 - cytoplasmic translation [Evidence IC] [PMID 11983894]; GO_process: GO:0000027 - ribosomal large subunit assembly [Evidence IMP] [PMID 2277060]; GO_process: GO:0006412 - translation [Evidence IEA]
codon start: 1
product: ribosomal 60S subunit protein L11B
translation: MRNLKIEKLVLNICVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKISVHVTVRGPKAEEILERGLKVKEYELKAKNFSETGNFGFGINEHIDLGIKYDPSIGIYGMDFYVVVGRPGFRVARRKRAQAPIGKHHKISKEDSIKWFKQKYDAIVLGSGSA
SIO_010081: AWJ20_397
subclass of: SO_0000673
so part of: AWJ20_397
location: complement(1277376..1277885)
location: region:1277376-1277885:-1
so has part: feature:1277376-1277885:-1:exon

XP_018734636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1277376-1277885:-1:exon

AWJ20_398
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YRB1
locus tag: AWJ20_398
so part of: sequence
location: complement(<1279043..>1279279)
location: region:1279043-1279279:-1
so has part: feature:1279043-1279279:-1:exon
subclass of: SO_0000010

30036060
type: Gene
SIO_000068: ncbigene

position:1279043:-1
position: 1279043
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1279279:-1
position: 1279279
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279043-1279279:-1:exon

AWJ20_398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YRB1
locus tag: AWJ20_398
product: Yrb1p
transcript id: XM_018881022.1
SIO_010081: AWJ20_398
subclass of: SO_0000673
so part of: AWJ20_398
location: complement(<1279043..>1279279)
location: region:1279043-1279279:-1
so has part: feature:1279043-1279279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279043-1279279:-1:exon

AWJ20_398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YRB1
locus tag: AWJ20_398
inference: similar to AA sequence:KEGG_Orthology:K15306
note: Ran GTPase binding protein; involved in nuclear protein import and RNA export, ubiquitin-mediated protein degradation during the cell cycle; shuttles between the nucleus and cytoplasm; is essential; homolog of human RanBP1; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 10825193]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 10825193]; GO_function: GO:0005096 - GTPase activator activity [Evidence IEA]; GO_function: GO:0008536 - Ran GTPase binding [Evidence IDA] [PMID 7836422]; GO_process: GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP] [PMID 10991951]; GO_process: GO:0006405 - RNA export from nucleus [Evidence IMP] [PMID 7489726]; GO_process: GO:0046907 - intracellular transport [Evidence IEA]; GO_process: GO:0043547 - positive regulation of GTPase activity [Evidence IEA]; GO_process: GO:0006606 - protein import into nucleus [Evidence IMP] [PMID 7489726]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 10991951]
codon start: 1
product: Yrb1p
translation: MRRDKTLKICANHYIHPEYKLSPNVGSDRSWVYNVASDISEGEPEAQTLAIRFANADNANAFKEEFAKAQALNKEASK
SIO_010081: AWJ20_398
subclass of: SO_0000673
so part of: AWJ20_398
location: complement(1279043..1279279)
location: region:1279043-1279279:-1
so has part: feature:1279043-1279279:-1:exon

XP_018734637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279043-1279279:-1:exon

AWJ20_399
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: YRB1
locus tag: AWJ20_399
so part of: sequence
location: complement(<1279657..>1280034)
location: region:1279657-1280034:-1
so has part: feature:1279657-1280034:-1:exon
subclass of: SO_0000010

30036071
type: Gene
SIO_000068: ncbigene

position:1279657:-1
position: 1279657
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1280034:-1
position: 1280034
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279657-1280034:-1:exon

AWJ20_399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: YRB1
locus tag: AWJ20_399
product: Yrb1p
transcript id: XM_018881033.1
SIO_010081: AWJ20_399
subclass of: SO_0000673
so part of: AWJ20_399
location: complement(<1279657..>1280034)
location: region:1279657-1280034:-1
so has part: feature:1279657-1280034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279657-1280034:-1:exon

AWJ20_399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: YRB1
locus tag: AWJ20_399
note: Ran GTPase binding protein; involved in nuclear protein import and RNA export, ubiquitin-mediated protein degradation during the cell cycle; shuttles between the nucleus and cytoplasm; is essential; homolog of human RanBP1; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 10825193]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 10825193]; GO_function: GO:0005096 - GTPase activator activity [Evidence IEA]; GO_function: GO:0008536 - Ran GTPase binding [Evidence IDA] [PMID 7836422]; GO_process: GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP] [PMID 10991951]; GO_process: GO:0006405 - RNA export from nucleus [Evidence IMP] [PMID 7489726]; GO_process: GO:0046907 - intracellular transport [Evidence IEA]; GO_process: GO:0043547 - positive regulation of GTPase activity [Evidence IEA]; GO_process: GO:0006606 - protein import into nucleus [Evidence IMP] [PMID 7489726]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IMP] [PMID 10991951]
codon start: 1
product: Yrb1p
translation: MSEEIKKTVEDKVEAVKEAVAPKTEEPVTKTEEDKKDGAAPASIFGSSFKPTTTGATTNVFSMFGGAKPAADAESKTSADSDKKKDEEDEDEAPESPDVHFEPVIKMEKVEVKTNEEEEEVVYKM
SIO_010081: AWJ20_399
subclass of: SO_0000673
so part of: AWJ20_399
location: complement(1279657..1280034)
location: region:1279657-1280034:-1
so has part: feature:1279657-1280034:-1:exon

XP_018734638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279657-1280034:-1:exon

AWJ20_400
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PRE2
locus tag: AWJ20_400
so part of: sequence
location: <1281702..>1282220
location: region:1281702-1282220:1
so has part: feature:1281702-1282220:1:exon
subclass of: SO_0000010

30036084
type: Gene
SIO_000068: ncbigene

position:1281702:1
position: 1281702
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1282220:1
position: 1282220
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281702-1282220:1:exon

AWJ20_400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PRE2
locus tag: AWJ20_400
product: proteasome core particle subunit beta 5
transcript id: XM_018881046.1
SIO_010081: AWJ20_400
subclass of: SO_0000673
so part of: AWJ20_400
location: <1281702..>1282220
location: region:1281702-1282220:1
so has part: feature:1281702-1282220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1281702-1282220:1:exon

AWJ20_400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PRE2
locus tag: AWJ20_400
inference: similar to AA sequence:KEGG_Orthology:K02737
note: Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IC] [PMID 9087403]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IC] [PMID 9087403]; GO_component: GO:0000502 - proteasome complex [Evidence IEA]; GO_component: GO:0005839 - proteasome core complex [Evidence IEA]; GO_component: GO:0019774 - proteasome core complex, beta-subunit complex [Evidence IDA] [PMID 9087403]; GO_component: GO:0034515 - proteasome storage granule [Evidence IC] [PMID 9087403]; GO_function: GO:0004175 - endopeptidase activity [Evidence IEA]; GO_function: GO:0004175 - endopeptidase activity [Evidence IMP] [PMID 8808631]; GO_function: GO:0004175 - endopeptidase activity [Evidence IMP] [PMID 9312134]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA,IEA]; GO_process: GO:0010499 - proteasomal ubiquitin-independent protein catabolic process [Evidence IDA] [PMID 19162040]; GO_process: GO:0080129 - proteasome core complex assembly [Evidence IMP] [PMID 8808631]; GO_process: GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process [Evidence IDA] [PMID 11545745]; GO_process: GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process [Evidence IDA] [PMID 19029916]; GO_process: GO:0006508 - proteolysis [Evidence IEA]; GO_process: GO:0051603 - proteolysis involved in cellular protein catabolic process [Evidence IEA]
codon start: 1
product: proteasome core particle subunit beta 5
translation: MAGGAADCQFWETWLNTQCRLHELRNKERISVAAASKILANLTYSYKGAGLSMGTMICGYTKREGPAIFYVDSDGERLQGDLFCVGSGQTFAYGVLDKNYKWELTVEEALDLGKRSILAATHRDAYSGGSVNLYHVTEQGWVYHGNYDVGTELWDAKDREQSFNHIVTSIPS
SIO_010081: AWJ20_400
subclass of: SO_0000673
so part of: AWJ20_400
location: 1281702..1282220
location: region:1281702-1282220:1
so has part: feature:1281702-1282220:1:exon

XP_018734639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1281702-1282220:1:exon

AWJ20_401
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FHL1
locus tag: AWJ20_401
so part of: sequence
location: complement(<1282518..>1284965)
location: region:1282518-1284965:-1
so has part: feature:1282518-1284965:-1:exon
subclass of: SO_0000010

30036095
type: Gene
SIO_000068: ncbigene

position:1282518:-1
position: 1282518
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1284965:-1
position: 1284965
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282518-1284965:-1:exon

AWJ20_401
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FHL1
locus tag: AWJ20_401
product: Fhl1p
transcript id: XM_018881057.1
SIO_010081: AWJ20_401
subclass of: SO_0000673
so part of: AWJ20_401
location: complement(<1282518..>1284965)
location: region:1282518-1284965:-1
so has part: feature:1282518-1284965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282518-1284965:-1:exon

AWJ20_401
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FHL1
locus tag: AWJ20_401
note: Regulator of ribosomal protein (RP) transcription; has forkhead associated domain that binds phosphorylated proteins; recruits coactivator Ifh1p or corepressor Crf1p to RP gene promoters; also has forkhead DNA-binding domain though in vitro DNA binding assays give inconsistent results; computational analyses suggest it binds DNA directly at highly active RP genes and indirectly through Rap1p motifs at others; suppresses RNA pol III and splicing factor prp4 mutants; GO_component: GO:0032545 - CURI complex [Evidence IDA] [PMID 17452446]; GO_component: GO:0000790 - nuclear chromatin [Evidence IDA] [PMID 15620355]; GO_component: GO:0000790 - nuclear chromatin [Evidence IDA] [PMID 15692568]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 15466158]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 15466158]; GO_component: GO:0005667 - transcription factor complex [Evidence IBA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003705 - RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity [Evidence IBA]; GO_function: GO:0001225 - RNA polymerase II transcription coactivator binding [Evidence IPI] [PMID 15620355]; GO_function: GO:0001226 - RNA polymerase II transcription corepressor binding [Evidence IPI] [PMID 15620355]; GO_function: GO:0003690 - double-stranded DNA binding [Evidence IBA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19158363]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_process: GO:0010688 - negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter [Evidence IMP] [PMID 15620355]; GO_process: GO:0010688 - negative regulation of ribosomal prot…
codon start: 1
product: Fhl1p
translation: MAESASKSGVGSPATPVAMPQTTTGQEIDAQLKAIDEAASLDANIDPQFAQELIQATSGVIGEAAVGSLLAGGDLLGEVGGTNGSGSTGKSKKKVRREYLPEEIPEEYREKPQHSYSHLIATALRSRAPLTGLSLSDIYKAIQEIFPYYEYCPHGWQNSVRHNLSSNKAFRKVSKEGKGWLWGIDEEYFLEKERQKKKAAAAKSKAAAIQAAQQAARQQQQQLQQQQQQQQLQLQQLQLQQQQNEINNILNATTDEQLQLLQQQLQQPKKQKSIAELAREIEINRTGDGTYHANYSEMTRESLGIGSSGNAAGGNGNRPLSGSTRILPGGTQGRQASFTEYTRASGSGAPVSPSPNSIQAQLAANLQRQAALSRGGANSSGANSSTSSGTTTPLVQPSLAAGQNTFRMAKPPKQQGNVNMTTQAPGQTPSLKQSTSVPQMRVQPSKFYQAGNAGQSNSTISSTPVPAGGANAGSSANKSNATVAAVQSAGLSLAPDTIKALGVLQQKIQTQIQSMGIGTGANSQLLTNALAVAIAQAVKTGGANSISSLLNGKNPAQLTQLLQTALAAMAKKKSPAAGPSAPATSTATTAPTSSAPVAPTATSTAAADTVPVTPVAVAPVSNTQLPPATSTPVSSATIPAVTSVPVSAPPPTSVDLTQTPFESPAPQNTSTAPSVNTLSNGLAENPTSTTPVQPPVAAAAAAAVATPVSAPAPPVSSAPTTATTASAAPAKPAAKPSAATIAQLLAQASKISNPSPSMKAALEQLRAHASKLNATSASSPSTAATGPTTSSLPKRPSDEPLETLDTSAIKAPKSG
SIO_010081: AWJ20_401
subclass of: SO_0000673
so part of: AWJ20_401
location: complement(1282518..1284965)
location: region:1282518-1284965:-1
so has part: feature:1282518-1284965:-1:exon

XP_018734640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282518-1284965:-1:exon

AWJ20_402
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: FHL1
locus tag: AWJ20_402
so part of: sequence
location: complement(<1285344..>1286306)
location: region:1285344-1286306:-1
so has part: feature:1285344-1286306:-1:exon
subclass of: SO_0000010

30036106
type: Gene
SIO_000068: ncbigene

position:1285344:-1
position: 1285344
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1286306:-1
position: 1286306
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285344-1286306:-1:exon

AWJ20_402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: FHL1
locus tag: AWJ20_402
product: Fhl1p
transcript id: XM_018881068.1
SIO_010081: AWJ20_402
subclass of: SO_0000673
so part of: AWJ20_402
location: complement(<1285344..>1286306)
location: region:1285344-1286306:-1
so has part: feature:1285344-1286306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285344-1286306:-1:exon

AWJ20_402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: FHL1
locus tag: AWJ20_402
note: Regulator of ribosomal protein (RP) transcription; has forkhead associated domain that binds phosphorylated proteins; recruits coactivator Ifh1p or corepressor Crf1p to RP gene promoters; also has forkhead DNA-binding domain though in vitro DNA binding assays give inconsistent results; computational analyses suggest it binds DNA directly at highly active RP genes and indirectly through Rap1p motifs at others; suppresses RNA pol III and splicing factor prp4 mutants; GO_component: GO:0032545 - CURI complex [Evidence IDA] [PMID 17452446]; GO_component: GO:0000790 - nuclear chromatin [Evidence IDA] [PMID 15620355]; GO_component: GO:0000790 - nuclear chromatin [Evidence IDA] [PMID 15692568]; GO_component: GO:0005730 - nucleolus [Evidence IDA] [PMID 15466158]; GO_component: GO:0005634 - nucleus [Evidence IEA,IEA]; GO_component: GO:0005634 - nucleus [Evidence IDA] [PMID 15466158]; GO_component: GO:0005667 - transcription factor complex [Evidence IBA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003705 - RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity [Evidence IBA]; GO_function: GO:0001225 - RNA polymerase II transcription coactivator binding [Evidence IPI] [PMID 15620355]; GO_function: GO:0001226 - RNA polymerase II transcription corepressor binding [Evidence IPI] [PMID 15620355]; GO_function: GO:0003690 - double-stranded DNA binding [Evidence IBA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19111667]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IDA] [PMID 19158363]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_process: GO:0010688 - negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter [Evidence IMP] [PMID 15620355]; GO_process: GO:0010688 - negative regulation of ribosomal prot…
codon start: 1
product: Fhl1p
translation: MSTASPGSGSPLRDPSDAVRSMSHTPTGYENIKLEHDAFGMLPPPGAAPDAGSGHESNLTGNNILNQAGSGGSSSSGASNMDIFATPKNDRTLPSSLIASLLDPLTEVRKPTLERSLDGNSMSLNNGLGSTLILPGRASSMPPETPSSIRDREAAGSGAFSTLGSPSSFPLTFASSQAQVKTESGSNTNPNTTSSELSAANAITTGSTIHPTGDNSTNNHNNNELDIDESARVSAYARLDFESFTFYVQTLQVILGRRAENGTGMVDVHLGPAKAISRKHAKIFYNFGTQRFELSVMGRNGAFVGDVFVETGSTVPLSDG
SIO_010081: AWJ20_402
subclass of: SO_0000673
so part of: AWJ20_402
location: complement(1285344..1286306)
location: region:1285344-1286306:-1
so has part: feature:1285344-1286306:-1:exon

XP_018734641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1285344-1286306:-1:exon

AWJ20_403
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: PKH3
locus tag: AWJ20_403
so part of: sequence
location: complement(<1287296..>1288858)
location: region:1287296-1288858:-1
so has part: feature:1287296-1288858:-1:exon
subclass of: SO_0000010

30036117
type: Gene
SIO_000068: ncbigene

position:1287296:-1
position: 1287296
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1288858:-1
position: 1288858
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287296-1288858:-1:exon

AWJ20_403
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: PKH3
locus tag: AWJ20_403
product: protein kinase PKH3
transcript id: XM_018881079.1
SIO_010081: AWJ20_403
subclass of: SO_0000673
so part of: AWJ20_403
location: complement(<1287296..>1288858)
location: region:1287296-1288858:-1
so has part: feature:1287296-1288858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1287296-1288858:-1:exon

AWJ20_403
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: PKH3
locus tag: AWJ20_403
codon start: 1
product: protein kinase PKH3
translation: MSEYKTTTGSNGPNTGREDQLEAETSVPINMRPSIDVQTVPSSTSSTTGSTGSSSVYVKSTSPLRLETPRTPPFRSKSSPPFSPGSPNSNSSPGPESPVTPNSSSHFRNHDPIPLILSSPLYNDHDDLIPLPFSKSTLSRTSSQRSSHNVHIQPKVSMADVPVDSGLFNLSLPYEPTAPLITYPRVLDISAFGSTYPAQVNNPGGSAEINLLGTGNFCKTVLSQPDPVTGQVFAVKIPKNNAQGALIRHEAAILSLVYEDTSTSIPGIISFYGIVETTLDDVSLTGIAMKVYQQTCQTFLSTFDPFSPSNNINTSSEASSFISFTDPFIGFALWKKWASQLIDGLLFLQSKQIVHCDIKPDNILLDENLNAHIGDFSSAQTDSELNSSTTTATSSIQTSDYNSNSSPTTHKSLSFGAFAMQFSAPELLQPPNSPDLSMPNFSTDAYSLGLTLLNFATGSEPFSSAVKHVTQKLMWARKGAALQACSPEDNLRLTTIRPTLTSFLVTRAPLAEIKASLCSL
SIO_010081: AWJ20_403
subclass of: SO_0000673
so part of: AWJ20_403
location: complement(1287296..1288858)
location: region:1287296-1288858:-1
so has part: feature:1287296-1288858:-1:exon

XP_018734642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287296-1288858:-1:exon

AWJ20_404
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: CTS1
locus tag: AWJ20_404
so part of: sequence
location: complement(<1292097..>1293983)
location: region:1292097-1293983:-1
so has part: feature:1292097-1293983:-1:exon
subclass of: SO_0000010

30036128
type: Gene
SIO_000068: ncbigene

position:1292097:-1
position: 1292097
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1293983:-1
position: 1293983
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292097-1293983:-1:exon

AWJ20_404
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: CTS1
locus tag: AWJ20_404
product: Cts1p
transcript id: XM_018881089.1
SIO_010081: AWJ20_404
subclass of: SO_0000673
so part of: AWJ20_404
location: complement(<1292097..>1293983)
location: region:1292097-1293983:-1
so has part: feature:1292097-1293983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292097-1293983:-1:exon

AWJ20_404
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: CTS1
locus tag: AWJ20_404
inference: similar to AA sequence:KEGG_Orthology:K01183
note: Endochitinase; required for cell separation after mitosis; transcriptional activation during the G1 phase of the cell cycle is mediated by transcription factor Ace2p; GO_component: GO:0005618 - cell wall [Evidence IEA,IEA]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 11747810]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 11914276]; GO_component: GO:0005576 - extracellular region [Evidence IEA,IEA]; GO_component: GO:0005576 - extracellular region [Evidence IDA] [PMID 19129178]; GO_component: GO:0005576 - extracellular region [Evidence IDA] [PMID 1918080]; GO_component: GO:0009277 - fungal-type cell wall [Evidence IDA] [PMID 11747810]; GO_component: GO:0009277 - fungal-type cell wall [Evidence IDA] [PMID 1918080]; GO_component: GO:0005635 - nuclear envelope [Evidence IDA] [PMID 11914276]; GO_function: GO:0008061 - chitin binding [Evidence IEA]; GO_function: GO:0004568 - chitinase activity [Evidence IEA,IEA]; GO_function: GO:0008843 - endochitinase activity [Evidence IDA] [PMID 6799506]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA,IEA]; GO_process: GO:0006032 - chitin catabolic process [Evidence IEA,IEA]; GO_process: GO:0006032 - chitin catabolic process [Evidence IC] [PMID 3033651]; GO_process: GO:0007109 - cytokinesis, completion of separation [Evidence IMP] [PMID 1918080]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0000272 - polysaccharide catabolic process [Evidence IEA]
codon start: 1
product: Cts1p
translation: MLSVLILSTLLAAVATAFDAAGNDNVVVYWGQNSAGGQNTQESLAYYCQYEATDVVVLSFLTTFFGTDGLPEVNFAGACTGPSFPGTGLFQCDQIATDIKTCQGLGKKVLLSLGGASGSYGFTSDSQGEEFADTLWNVFGGGSSDTRPFGDSVVDGFDLDIENNNPVGYGAFVTQMRSHYSSDTSKQYYISGAPQCPIPDAGLNTALTTSDFDFVFVQFYNNFCGMQNWQGSTPGANFNYDSWDTFVKTQSFNKNAKIYLGVPASASAAGSGYQPIDVVSSAAKYLQSTYSTFGGIMMWDASQAWANVGSDGNNFAQGAKAALQGGASAPPPPAVSPASSPISSATTSTSTIVWWTPPAVSSSTPIAVSSSIAVSSSVPLSSSSSLELPSSTPVEAPSSSSTSSSSTVWWTPSAVSSSSVPASTPSSSPVEASSSFLSSVVSSLSSVPLSSAVTSSPASSAPVSSVPSSVLSSNNAEISSTPISSALPVSSSSIALGSEQESSSTPSSAPASVIASTSSPAVSSIQSASPTASPSSVAALTTSPANLVLAATPSSTTTSSTAIVTPQPPTYFSAIGPDGSLDSVPHDVTYYLTTNGEVMEIVTHYNPNQYSTLVQTWTTGTAIVTVAA
SIO_010081: AWJ20_404
subclass of: SO_0000673
so part of: AWJ20_404
location: complement(1292097..1293983)
location: region:1292097-1293983:-1
so has part: feature:1292097-1293983:-1:exon

XP_018734643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292097-1293983:-1:exon

AWJ20_405
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_405
so part of: sequence
location: complement(<1295683..>1296858)
location: region:1295683-1296858:-1
so has part: feature:1295683-1296858:-1:exon
subclass of: SO_0000010

30036139
type: Gene
SIO_000068: ncbigene

position:1295683:-1
position: 1295683
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1296858:-1
position: 1296858
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295683-1296858:-1:exon

AWJ20_405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_405
product: hypothetical protein
transcript id: XM_018881100.1
SIO_010081: AWJ20_405
subclass of: SO_0000673
so part of: AWJ20_405
location: complement(<1295683..>1296858)
location: region:1295683-1296858:-1
so has part: feature:1295683-1296858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295683-1296858:-1:exon

AWJ20_405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_405
inference: similar to AA sequence:KEGG_Orthology:K10882
codon start: 1
product: hypothetical protein
translation: MKESNSGDCLGETRELGTEEEPEPRSAKMTKSAAAKLQKKEAAERKKAERLASKMAAEAEKKRKKELDEANRKKSSRSSCAKEIIIKFGKDFAKSELGSVIKQQSEELGCDIKEVDRAEESENGIYYSITFDRKVTNRFDPEQDMYVPIPLEIKPENVVVIYMEGKKAVDIFLNTDKKKQHLETIDAAYREYQVLYIIEGLHAQLKKADLELDKKFADRVRQLVAGQATAVEATTNIISDRPSKIAWDSLIELEITKNCRLCHTKSREESAEMILGFAMDIGSRHYKARELLASETLDMIGTVRSGTSIQDTLSKSLEQIKYVTPVVSKSVASVYNNMFGLMESIDKRGTEALEGLRKESGTRSTKVVGSSLAKSICKILQSKDPDQYLQL
SIO_010081: AWJ20_405
subclass of: SO_0000673
so part of: AWJ20_405
location: complement(1295683..1296858)
location: region:1295683-1296858:-1
so has part: feature:1295683-1296858:-1:exon

XP_018734644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1295683-1296858:-1:exon

AWJ20_406
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: SEC8
locus tag: AWJ20_406
so part of: sequence
location: complement(<1298203..>1301328)
location: region:1298203-1301328:-1
so has part: feature:1298203-1301328:-1:exon
subclass of: SO_0000010

30036150
type: Gene
SIO_000068: ncbigene

position:1298203:-1
position: 1298203
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1301328:-1
position: 1301328
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298203-1301328:-1:exon

AWJ20_406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: SEC8
locus tag: AWJ20_406
product: Sec8p
transcript id: XM_018881111.1
SIO_010081: AWJ20_406
subclass of: SO_0000673
so part of: AWJ20_406
location: complement(<1298203..>1301328)
location: region:1298203-1301328:-1
so has part: feature:1298203-1301328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298203-1301328:-1:exon

AWJ20_406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: SEC8
locus tag: AWJ20_406
inference: similar to AA sequence:KEGG_Orthology:K06111
note: Essential 121 kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; involved in ER and Golgi inheritance in small buds; relocalizes away from bud neck upon DNA replication stress; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 12960429]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 22842922]; GO_component: GO:0005935 - cellular bud neck [Evidence IDA] [PMID 9491896]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 12960429]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 17717527]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 22842922]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 7615633]; GO_component: GO:0005934 - cellular bud tip [Evidence IDA] [PMID 9491896]; GO_component: GO:0005737 - cytoplasm [Evidence IEA,IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID 22842922]; GO_component: GO:0000145 - exocyst [Evidence IEA]; GO_component: GO:0000145 - exocyst [Evidence IDA] [PMID 1512289]; GO_component: GO:0000145 - exocyst [Evidence IDA] [PMID 7615633]; GO_component: GO:0000145 - exocyst [Evidence IDA] [PMID 8978675]; GO_component: GO:0000131 - incipient cellular bud site [Evidence IDA] [PMID 9491896]; GO_component: GO:0043332 - mating projection tip [Evidence IDA] [PMID 19053807]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005886 - plasma membrane [Evidence IEA,IEA]; GO_component: GO:0005628 - prospore membrane [Evidence IDA] [PMID 24390141]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_process: GO:0048313 - Golgi inheritance [Evidence IMP] [PMID 15596717]; GO_process: GO:0006893 - Golgi to plasma membrane transport [Evidence IGI,IMP] [PMID 7026045]; GO_process: GO:0048309 - endoplasmic reticulum inheritance [Evidence IMP] [PMID 15596717]; GO…
codon start: 1
product: Sec8p
translation: MGSNRIIANYQGFNSSIGSYRTIVQSVTNSQNNIDSTKQLILKARQDLSTRRPILKELRASSLKYDHMIKILDLIEELRSVPDRLELEIAQKQFLSAHDTLSTALRTIDNEDLAKVGGLQPLQAYLSSQESSLFSILIEELSNHLYLKSPYCDTRWSSYSQGGDQVSSIEQLIEDKVKFDMSEESLSFSGSALLDEFLSNFDRTTQLSAENQISEVGSFNYIRLVVETLGRLNKLPNAFDLLHQRLPLELSKVIDKTVSEVRQGAPKSLILEDTPEGFDDDPRVVANGGTLQTGQVLVGATRSRSSTTSGATSVVNGSSAGGASNRLSAASKDGSGTVVGGAAELFSELENPQIEARLAVLKDLAWTLYSKFIAILQGHRVVYEVVAAISSRLSGQGQSALLSYDYFAVVSSIETEIIQLMKAYITTKRTIRPDTPKAPPTFKRQMSIFKSQQKTRSVFKFASSDIDNFEIKEQYDLLKKKLENTVPGLVLNDTGNNLSLKQAVMPYAPTDKTLNHSLLIAPNVLNVRALLEPTVVFLQRAKVVHPYADRKQQQALNKSSTRLLDDFLTNSYLPQLENSLLSSFQNIMLDPLSTQIDPHWSKVAKRPVLQGAISFIRLIKMTCKLLNTGYMYREKYASLIISAIGWLTNFYTSRYNEFVEGHYEEVPAGTNVVPKKMAAELANDAVARNLALTIMHSVPHTDESEQSIADEIGVFLRRRISQTSTDDRTRRRVMQNDLLEIESYRFLSVMTTSIRWIVLELEKMRKVTDVETDPENEDGDGLDSSATLQARIKKRWTLLEANHVGQSFSDDTEYLTLAGKSVQDFDNSISALGTLAETCVVTLRFDLRFRSVYFIDRTMVEGDYYLESDVEERDAFIGLLDTSIVSCDEAIGEALVRKDRDAVIRGLAKTLNALLIYGADSLRKINSNGVNKMYCNILVLQQMLKSVAVDPKDVDFSLAMEFYGHLNQSPGVLIERLRKNDTNIGSDEAKIICRLLHNDIIYKHEQASRREAASQAKRQMDAQIKEIHQIFWGSDRIAVKE
SIO_010081: AWJ20_406
subclass of: SO_0000673
so part of: AWJ20_406
location: complement(1298203..1301328)
location: region:1298203-1301328:-1
so has part: feature:1298203-1301328:-1:exon

XP_018734645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1298203-1301328:-1:exon

AWJ20_407
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: VPS15
locus tag: AWJ20_407
so part of: sequence
location: complement(<1302101..>1306153)
location: region:1302101-1306153:-1
so has part: feature:1302101-1306153:-1:exon
subclass of: SO_0000010

30036161
type: Gene
SIO_000068: ncbigene

position:1302101:-1
position: 1302101
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1306153:-1
position: 1306153
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302101-1306153:-1:exon

AWJ20_407
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: VPS15
locus tag: AWJ20_407
product: ubiquitin-binding serine/threonine protein kinase VPS15
transcript id: XM_018881122.1
SIO_010081: AWJ20_407
subclass of: SO_0000673
so part of: AWJ20_407
location: complement(<1302101..>1306153)
location: region:1302101-1306153:-1
so has part: feature:1302101-1306153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1302101-1306153:-1:exon

AWJ20_407
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: VPS15
locus tag: AWJ20_407
inference: similar to AA sequence:KEGG_Orthology:K08333
codon start: 1
product: ubiquitin-binding serine/threonine protein kinase VPS15
translation: MANVASAEGSLTQEMDIFSLGCVIAEIFLEGASIFTLAQLFKYKKGEYKPPLGDIEDESIRSLVMSMISLDPAERLSADEYLNQWTDKAFPKYFEFLHEYIENISRPLQSVGNTERARHVESDQRIEMIWKNYRRISRELGLVVDDSELDGPGHVRSGNEEKGEKNGYIRGEYGDVDLTFTSTVGGDVIPVCLDLPGMDNWIPKKKKTLPGDHDDGALIVVAVVCSAIRNTLRSSSKIKACDLLLALGEQIHDEAKLDRCLPYLMSLLDDTSDNVQVAALRSLTQLLTLVGAITPINDKIFPEYIFPRLTLLLQDRSSVVVRAAYAACLPTLAQIASRFLDMGQILQTTGIMSEKDPDIENGAVITEDDRKRAYDVIKQDLSLVIEEHARSLLTDHNPDIRRALLRHIVPLCLFLGRQKTNDVILSHAITYLNDSDAQLRMQLFDSVVGIAPYVGSVSLKEYVTPLMMQSLTDSEELVVNKVVQAFTALAGLGLLEMSYIWELLRACAKFMVHPNNWIRNSTFCLFASSTRWMSPAQIYSMLWPILQPFMEGDINDFSVASLSIHAKPPLPREIYNLTATWATKAQKSIFWKTEASHNKSTKRDKTIDLSNEKNRSSKPKNLRATAEDEQWLTRLRVIGMKESQLWMLALYKEYIFRVFRSRSRRVDERHSPTGGDNTSPFIKMQDLGILPQNVFFDTTPIDDGFSDLLSSSAIKGRINSKTSSPVFVDEHFEATRLLAADVDETDSAGGSGRLGGSNSDSKWRELIMAHPVTGTVFTDVYGELDSQLRDSQLLDGGSGITPSKETLKYSSYTGDDPYIWRMLGSVYKDSVTFESPEFGPRCSPYTGSMKPENITKKRKGKMGILAANYEEHAGPVNAIAVAPDHSFFVTGSDDGTVKIWDSFRLEKNVINRAAKTVHFKAEQEKPNQVKCICFIENTYSLACGTTDGSVNLIRVETVNQSSSLSGPRYKPVVKLNGFKLNSGEYAIALSHGQTSSSSLLYVLTTDSRIVVFDLIAKKQVAVMENPSSHGIPTCFVLDKHKNWVLVGTSRGILDLWDTRFQVHIRSWGIPGGQPINSLSLYMNPKAEGKWVCVSGGTKECEITVWDIETVQCREIYRTTPQLSSHRHRHGESSSRREPTPTANYSPVDVDKSMVNGNNNGPPTLSILLSQLKLQTDQEEQRHNDDTQTERPSQHDEPPRADSILSLSSGYSIDHTATGPNRRGYLLSGGTDRIVRFWDLNALDHSTIISGIKAEATYQPSYVLSYPEPNTRLVTERLVSSVSSSSSQSHKSSSSKKPSKSDRPPRSTIIACEQLDLSRNHQSSVLAVALLLKPFEMVVSADRLGTIKVYI
SIO_010081: AWJ20_407
subclass of: SO_0000673
so part of: AWJ20_407
location: complement(1302101..1306153)
location: region:1302101-1306153:-1
so has part: feature:1302101-1306153:-1:exon

XP_018734646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1302101-1306153:-1:exon

AWJ20_408
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_408
so part of: sequence
location: <1311922..>1312146
location: region:1311922-1312146:1
so has part: feature:1311922-1312146:1:exon
subclass of: SO_0000010

30036172
type: Gene
SIO_000068: ncbigene

position:1311922:1
position: 1311922
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1312146:1
position: 1312146
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1311922-1312146:1:exon

AWJ20_408
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_408
product: GTP-binding protein
transcript id: XM_018881133.1
SIO_010081: AWJ20_408
subclass of: SO_0000673
so part of: AWJ20_408
location: <1311922..>1312146
location: region:1311922-1312146:1
so has part: feature:1311922-1312146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1311922-1312146:1:exon

AWJ20_408
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_408
note: top hit is XP_006683298.1 originated in Batrachochytrium dendrobatidis JAM81
codon start: 1
product: GTP-binding protein
translation: MSEANNNFATTVLPKDDHAEGKQHSQGQPGIHLPKNADDIKEFSQVRNVDAKALNEQIAKAEQEAKDKVNELSK
SIO_010081: AWJ20_408
subclass of: SO_0000673
so part of: AWJ20_408
location: 1311922..1312146
location: region:1311922-1312146:1
so has part: feature:1311922-1312146:1:exon

XP_018734647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1311922-1312146:1:exon

AWJ20_409
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_409
so part of: sequence
location: <1314763..>1317332
location: region:1314763-1317332:1
so has part: feature:1314763-1317332:1:exon
subclass of: SO_0000010

30036183
type: Gene
SIO_000068: ncbigene

position:1314763:1
position: 1314763
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1317332:1
position: 1317332
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314763-1317332:1:exon

AWJ20_409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
locus tag: AWJ20_409
product: hypothetical protein
transcript id: XM_018881143.1
SIO_010081: AWJ20_409
subclass of: SO_0000673
so part of: AWJ20_409
location: join(<1314763..1316065,1316980..>1317332)
location: region:1314763-1317332:1
so has part: feature:1314763-1316065:1:exon
so has part: feature:1316980-1317332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1314763-1316065:1:exon

position:1316065:1
position: 1316065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1316980-1317332:1:exon

position:1316980:1
position: 1316980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AWJ20_409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
locus tag: AWJ20_409
codon start: 1
product: hypothetical protein
translation: MAPPRHFVRKPVGVGEGSDSWVLRVSGLLRASRTESARIVFGLVTPVLGAGGKEDEEEELPTVSEIRVAENGQTVFIVVLERRSGELIRDKLHGFYIGRGHRLAVEFSDRTTLEQQLQNDFNSLVFRTQRISQQESGSGFDTKKSSESLTASDDRSTEKVPLTEAGVMVPSVSAAAPTLPPPATDAATDMEAKTFLDSLKSSLPTYVPFKADAENRIAVEYPRDIRTLRLVNMVVENVVQYGPAFELALMDQQQNNPDYEFLFNFDLPLHIYYRWKLVSLGKSLGLSKNDTPGLSRSSVSLNDWQTSTRQGVRFPVPMELYPNMNFVPPFPPETLDREIDELQDRSSSPSLGPPPFTSLTSTTDRDRRVRTRPFLGEIPALHLTVLLRYVSYERGSIARVMAFAIDHEAAAPEIVDLICTSIEHPSATTQSRIARTEEGSDDVNDGAAESGGLYDCTSKAAAAAAAAAAAVVLAVVAGLAAVGVTDPDNGAITGGGPLLITDVGEEADDDFRRLELLWLLLFSLSSSSSCVKLDELIGLVFFDTGEPELYF
SIO_010081: AWJ20_409
subclass of: SO_0000673
so part of: AWJ20_409
location: join(1314763..1316065,1316980..1317332)
location: region:1314763-1317332:1
so has part: feature:1314763-1316065:1:exon
so has part: feature:1316980-1317332:1:exon

XP_018734648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1314763-1316065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316980-1317332:1:exon

AWJ20_410
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MSN4
locus tag: AWJ20_410
so part of: sequence
location: complement(<1316552..>1318852)
location: region:1316552-1318852:-1
so has part: feature:1316552-1318852:-1:exon
subclass of: SO_0000010

30036195
type: Gene
SIO_000068: ncbigene

position:1316552:-1
position: 1316552
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1318852:-1
position: 1318852
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316552-1318852:-1:exon

AWJ20_410
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MSN4
locus tag: AWJ20_410
product: stress-responsive transcriptional activator MSN4
transcript id: XM_018881155.1
SIO_010081: AWJ20_410
subclass of: SO_0000673
so part of: AWJ20_410
location: complement(<1316552..>1318852)
location: region:1316552-1318852:-1
so has part: feature:1316552-1318852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1316552-1318852:-1:exon

AWJ20_410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MSN4
locus tag: AWJ20_410
inference: similar to AA sequence:KEGG_Orthology:K09468
codon start: 1
product: stress-responsive transcriptional activator MSN4
translation: MSYMNSPSTLIYQSPSSNYSPGTGLLSSSPSSTSLYQSHHHNLHNAGLTGSSPSQMHHQQQQQHHQLASSHFQQQQPLHHQQQHHHQPTTMTSSISMPSLSSYVQSPGSSGFYETLSPSMLMLPDQQVPHTPGPSSGTGSGQLQLGQSPIKMERSRTSAGGGLYFEDDQQQQLQLQLQHQQHLHQIHQQQQQQQHQQQQQQQQQQAALAHSAIPASSSSLAGPPLTSLPMASPSTGNSASASAAAAAAAAAAIAAGNTGMPTPYTHHQQMPVSTVPSSTGSHHQRLNSNDFLNPASLMASTPLSSSTLASKRHSAPSGLAVERVRSNSTSSIYNYGQPTFQTPLRRNNILSPSSTTSNSSSAGLMTPGSVTSASAWALYNTANRSSSSTTGGTNPFYTSSSAASSLTATPASMSASSSVDPGSVQSNATTPMTPTRRYTDFGAGVKLDFSSKLNFQSTATTPNSGSLSNKITSPSSATSSTTMVNTPGTSGGINPFYKPSAYIQQQSQKYSSGSPVSKKTSPINSSSLTHDEEDDNENNNNHNSSRRRKSSSASSPTSVINSGPPPVMAPLSGSVTPTAANPATTANTTAAAAAAAAAAALEVQSYSPPLSAAPSLTSSEPSSVPNSPDSPINDSYGHGDETPQYSLLAGQHSLSGTQYQFFDSSRTMLPDGTFLPAPKNPPGRPLKNGGASKPHRCHECMKTFRRLEHLKRHSKIHTEERPFSCDIPGCNRTFSRSDNLRAHRKTHMKRGGRNIYIEGLAADSAH
SIO_010081: AWJ20_410
subclass of: SO_0000673
so part of: AWJ20_410
location: complement(1316552..1318852)
location: region:1316552-1318852:-1
so has part: feature:1316552-1318852:-1:exon

XP_018734649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1316552-1318852:-1:exon

AWJ20_411
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: MDH1
locus tag: AWJ20_411
so part of: sequence
location: complement(<1327957..>1328658)
location: region:1327957-1328658:-1
so has part: feature:1327957-1328658:-1:exon
subclass of: SO_0000010

30036206
type: Gene
SIO_000068: ncbigene

position:1327957:-1
position: 1327957
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1328658:-1
position: 1328658
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327957-1328658:-1:exon

AWJ20_411
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: MDH1
locus tag: AWJ20_411
product: malate dehydrogenase MDH1
transcript id: XM_018881166.1
SIO_010081: AWJ20_411
subclass of: SO_0000673
so part of: AWJ20_411
location: complement(<1327957..>1328658)
location: region:1327957-1328658:-1
so has part: feature:1327957-1328658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327957-1328658:-1:exon

AWJ20_411
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: MDH1
locus tag: AWJ20_411
inference: similar to AA sequence:KEGG_Orthology:K00026
note: Mitochondrial malate dehydrogenase; catalyzes interconversion of malate and oxaloacetate; involved in the tricarboxylic acid (TCA) cycle; phosphorylated; GO_component: GO:0005759 - mitochondrial matrix [Evidence IEA]; GO_component: GO:0005759 - mitochondrial matrix [Evidence IDA] [PMID 9774331]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IMP] [PMID 10777592]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 11502169]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0005739 - mitochondrion [Evidence IPI] [PMID 16962558]; GO_function: GO:0030060 - L-malate dehydrogenase activity [Evidence IEA,IEA]; GO_function: GO:0030060 - L-malate dehydrogenase activity [Evidence IMP] [PMID 10777592]; GO_function: GO:0030060 - L-malate dehydrogenase activity [Evidence IDA] [PMID 1898005]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0003729 - mRNA binding [Evidence IDA] [PMID 21124907]; GO_function: GO:0016615 - malate dehydrogenase activity [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA,IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_process: GO:0009060 - aerobic respiration [Evidence IMP] [PMID 3312168]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0044262 - cellular carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0001300 - chronological cell aging [Evidence IMP] [PMID 18381895]; GO_process: GO:0006108 - malate metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA,IEA]; GO_process: GO:0001302 - replicative cell aging [Evidence IMP] [PMID 18381895]; GO_process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]; GO_process: GO:0006099 - tricarboxylic acid cycle [Evidence IMP] [PMID 3312168]
codon start: 1
product: malate dehydrogenase MDH1
translation: MTRDDLFNTNASIVRDLAKAIGDVSPKAFVLIISNPVNSTVPIVAEVLKSKGVYDPKRLFGVTTLDVVRASRFISEVQGTSPDNEEVTVVGGHSGVTIVPLISQSNHPNISGEVLDKLINRIQFGGDEVVKAKDGAGSATLSMAQAGARFTSSILRAIKGEKDVVEPTFVESPLFKDEGIDFFSSKVTLGPNGVEEIHPLGPLNDLEEKLVAAAKVDLVKNIKKGKDFVAQNP
SIO_010081: AWJ20_411
subclass of: SO_0000673
so part of: AWJ20_411
location: complement(1327957..1328658)
location: region:1327957-1328658:-1
so has part: feature:1327957-1328658:-1:exon

XP_018734650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1327957-1328658:-1:exon

AWJ20_412
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: AIM9
locus tag: AWJ20_412
so part of: sequence
location: complement(<1330235..>1331950)
location: region:1330235-1331950:-1
so has part: feature:1330235-1331950:-1:exon
subclass of: SO_0000010

30036217
type: Gene
SIO_000068: ncbigene

position:1330235:-1
position: 1330235
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1331950:-1
position: 1331950
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1330235-1331950:-1:exon

AWJ20_412
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: AIM9
locus tag: AWJ20_412
product: Aim9p
transcript id: XM_018881177.1
SIO_010081: AWJ20_412
subclass of: SO_0000673
so part of: AWJ20_412
location: complement(<1330235..>1331950)
location: region:1330235-1331950:-1
so has part: feature:1330235-1331950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1330235-1331950:-1:exon

AWJ20_412
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: AIM9
locus tag: AWJ20_412
note: hypothetical protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays elevated frequency of mitochondrial genome loss; GO_component: GO:0005739 - mitochondrion [Evidence IEA,IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14562095]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_function: GO:0003674 - molecular_function [Evidence ND]; GO_function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]; GO_process: GO:0008150 - biological_process [Evidence ND]; GO_process: GO:0008152 - metabolic process [Evidence IEA]
codon start: 1
product: Aim9p
translation: MLRNRAVLSGLRSGRSGSVASASLWARQLSSSAVRRNEEDILKVSLNDSDLNSVDTKNFFKYTWGRWLVDDEKQRAARETKFSLRGLADVLREKVDYLQKSPSNAELQIKTIAPYHEGKHNKIYRVDLVDGRSYALRIPYSIGFPEYRKARMQSEVATMDFLKKKHNVLMPSVVSWSPTKDNRLQSEYQIMDFVSGDSLMKQWHPGSSDIKAKSSIIKPVVDLFGQIAETKFNKYGSLYFTEDVASEYQSDLPYEGETDPDLVDRYRIGPTVEGRFWKGKTAASAAEFRGPWTSINDYLGDLGNAQIAYVQELLADPSTAENVEFKTDLEKALATFERFARTSQVLFDAEAEELSPEITAPRLHDPDLNPINIIHRTDPVKSYLLDLEGTSIRPFLLHGAPTFVKHKGPKIFKKEDIPDYETLSDADKRAVDHFIVMTQNQFAFEFLLKQTKPELFPAFSPTIKRRQELVQTAHNTLVPSKDYIDLDYDILRLAQEWQFLTLDRPFPVEYTQAQLDAYVQDMDAWSKHVLNNPFLETRGWVPINLFEQLLGEGTLVRKDNGNYEFARPFSV
SIO_010081: AWJ20_412
subclass of: SO_0000673
so part of: AWJ20_412
location: complement(1330235..1331950)
location: region:1330235-1331950:-1
so has part: feature:1330235-1331950:-1:exon

XP_018734651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1330235-1331950:-1:exon

AWJ20_413
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: INP1
locus tag: AWJ20_413
so part of: sequence
location: <1333813..>1336509
location: region:1333813-1336509:1
so has part: feature:1333813-1336509:1:exon
subclass of: SO_0000010

30036228
type: Gene
SIO_000068: ncbigene

position:1333813:1
position: 1333813
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1336509:1
position: 1336509
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333813-1336509:1:exon

AWJ20_413
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: INP1
locus tag: AWJ20_413
product: Inp1p
transcript id: XM_018881188.1
SIO_010081: AWJ20_413
subclass of: SO_0000673
so part of: AWJ20_413
location: <1333813..>1336509
location: region:1333813-1336509:1
so has part: feature:1333813-1336509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1333813-1336509:1:exon

AWJ20_413
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: INP1
locus tag: AWJ20_413
note: Peripheral membrane protein of peroxisomes; involved in peroxisomal inheritance; recruitment to peroxisomes is mediated by interaction with Pex3p at the peroxisomal membrane; GO_component: GO:0005780 - extrinsic component of intraperoxisomal membrane [Evidence IEA]; GO_component: GO:0005780 - extrinsic component of intraperoxisomal membrane [Evidence IDA] [PMID 15928207]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005778 - peroxisomal membrane [Evidence IEA]; GO_component: GO:0005777 - peroxisome [Evidence IEA]; GO_component: GO:0005777 - peroxisome [Evidence IDA] [PMID 14562095]; GO_component: GO:0005777 - peroxisome [Evidence IDA] [PMID 23900285]; GO_function: GO:0030674 - protein binding, bridging [Evidence IMP] [PMID 23900285]; GO_process: GO:0045033 - peroxisome inheritance [Evidence IEA]; GO_process: GO:0045033 - peroxisome inheritance [Evidence IMP,IPI] [PMID 15928207]
codon start: 1
product: Inp1p
translation: MNDNMSEKEMAGDGGSYKLDVEGAESVQWRSRSSISPDSDEVHAWEVSESNEDVGLEFTPKVNGEETQKVNNEIESESGSQETVGKVLPLPGRFADNSVGSSVRCVSAPISGSTDSSNDTVNPSSVNIPSQIMKKPSNLHITNRLAQLDSPSLRSQRSSSWSSSSSLLSRRSSKNELTDDSESSFDSDVSVLFSGWVAKMTQFTSPNYDMTKDYESPPNMTTRVSESIVSEGKLQIYQILGKKAAFLQCGKFVHPILPRLRLWRVEDKVFVLPQPNPGKFWRIELLPSTSITNDESETIMESANDLNSLEQVLGDACFYRNVYEPEETSVEDEVESEEVGVEEQNDRDGESVVAGSLVDTQCDDMLIAEPEKEETGIEVDEVMIQDNSLESRVEPELELLSEPESQPILEEGIHSESELEPETQVDSQAEDEFILRPKTNPESFVESPMAPLTPKSSPLDLPNDIQGIIDLSTIGPESPSAHFLSSLQSPTTPPLSSPFTTGIHYDQTSSSSTLDEILDAFDDSPYQHSGPIFMEQGRDSPSVTISNDLINNKTNDHQQEHQITDQETPLNPIYETEDATSDVASFQSDEEPPHTQRPTPMTSTSSISTVTTNEVELPELSIDPATRLNNKENSTPVPFNPSTLPLAFLNHPFVPMPQLTTNKQLSSRQLHTRFQSPRQSLQFKSLEDDWLEVDVAPGTRPPVNYQASLSMRPGLGYLNWVAQVTGDLVSSSSNYVEGKIEKRRASSSSHPTSRDGSNPNSSTTASINPIYSPVPIKAAIPPLPEDVRTTVIDATRSGRNSPSPLPSKNAIRDLDTRLVPRSQLSSPTRGNTPSPTSTSNTTVFEKTTTGPQTPNQTHDTNNTDQVDPQPDLYQQAVIVSGYMGWQLLNRVIPPWVRR
SIO_010081: AWJ20_413
subclass of: SO_0000673
so part of: AWJ20_413
location: 1333813..1336509
location: region:1333813-1336509:1
so has part: feature:1333813-1336509:1:exon

XP_018734652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1333813-1336509:1:exon

AWJ20_414
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
gene: TOM40
locus tag: AWJ20_414
so part of: sequence
location: complement(<1337852..>1338958)
location: region:1337852-1338958:-1
so has part: feature:1337852-1338958:-1:exon
subclass of: SO_0000010

30036239
type: Gene
SIO_000068: ncbigene

position:1337852:-1
position: 1337852
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1338958:-1
position: 1338958
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337852-1338958:-1:exon

AWJ20_414
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 796027
gene: TOM40
locus tag: AWJ20_414
product: Tom40p
transcript id: XM_018881198.1
SIO_010081: AWJ20_414
subclass of: SO_0000673
so part of: AWJ20_414
location: complement(<1337852..>1338958)
location: region:1337852-1338958:-1
so has part: feature:1337852-1338958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1337852-1338958:-1:exon

AWJ20_414
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 796027
gene: TOM40
locus tag: AWJ20_414
inference: similar to AA sequence:KEGG_Orthology:K11518
note: Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; constitutes the core element of the protein conducting pore; pre-Tom40p is phosphorylated by PKA, which impairs its import into mitochondria under non-respiratory conditions; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005741 - mitochondrial outer membrane [Evidence IEA,IEA,IEA]; GO_component: GO:0005741 - mitochondrial outer membrane [Evidence IDA] [PMID 16407407]; GO_component: GO:0005742 - mitochondrial outer membrane translocase complex [Evidence IDA] [PMID 9774667]; GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 11914276]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 14576278]; GO_component: GO:0005739 - mitochondrion [Evidence IDA] [PMID 16823961]; GO_component: GO:0046930 - pore complex [Evidence IEA]; GO_function: GO:0015288 - porin activity [Evidence IEA]; GO_function: GO:0015266 - protein channel activity [Evidence IEA]; GO_function: GO:0015266 - protein channel activity [Evidence IDA] [PMID 9774109]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0030150 - protein import into mitochondrial matrix [Evidence IEA]; GO_process: GO:0030150 - protein import into mitochondrial matrix [Evidence IMP] [PMID 15590639]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]
codon start: 1
product: Tom40p
translation: MASPIASLGDVSNLPLGFKVPKTPTVWETNPVLSYFNDFYKAVAARRQALNLTNPGTLENINKEVSKDVFLNNYFFTGLRADLTKSFSMSPAFQVSHSFSLGSPVMPPYAFAAFYATDNVFLQGNVDNDLSVSGRLHYGWDKYNTTKANVQIANAQPAMLQLEHDFQASDFSLNFKTLNPSILDGGFTGVAVGSILQSVSSKLALGLEAVYSSQSPLYPPDAAVSYVARYDAKDWIASAQLQAQGAILASFWRRVTDKVEAGIETSISAGGSQQAMMMGAPPSVEASTTLGAKYEFRQSVFRGQIDSAGKVSCLLERRVLPVVSVIFAGEIDHAKSTARLGLGLQFEAGGEETFQQQVDPNDQPHPPM
SIO_010081: AWJ20_414
subclass of: SO_0000673
so part of: AWJ20_414
location: complement(1337852..1338958)
location: region:1337852-1338958:-1
so has part: feature:1337852-1338958:-1:exon

XP_018734653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1337852-1338958:-1:exon

AWJ20_415
type: Gene
subclass of: SO_0000704
RO_0002162: 796027
locus tag: AWJ20_415
so part of: sequence
location: complement(<1339430..>1340887)
location: region:1339430-1340887:-1
so has part: feature:1339430-1340887:-1:exon
subclass of: SO_0000010

30036250
type: Gene
SIO_000068: ncbigene