Carassius auratus strain Wakin linkage group LG42F, ASM336829v1, whole genome shotgun sequence.
type: Entry
definition: Carassius auratus strain Wakin linkage group LG42F, ASM336829v1, whole genome shotgun sequence.
sequence version: NC_039297.1
sequence date: 2018-09-05
sequence: sequence
division: CON
label: NC_039297.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA487739
dblink: SAMN09670328
keyword: WGS
keyword: RefSeq
source: Carassius auratus (goldfish)
organism: Carassius auratus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Carassius.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM010486.1.\nAssembly name: ASM336829v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the National Institutes of Health\non 2018/08/09. The original whole-genome shotgun project has the\naccession QPKE00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: National Institutes of Health\nAssembly Date :: MAY-2017\nAssembly Method :: Canu v. 1.5\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 71.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Carassius auratus Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 242804
topology: linear
so has quality: SO_0000987
location: 1..242804
location: region:1-242804:1
RO_0002162: 7957

NC_039297
type: RefSeq
SIO_000068: refseq

PRJNA487739
type: BioProject
SIO_000068: bioproject

SAMN09670328
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242804:1
position: 242804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-242804:1:source
so part of: sequence
organism: Carassius auratus
mol type: genomic DNA
strain: Wakin
tissue type: muscle
dev stage: juvenile
linkage group: LG42F

7957
type: Taxonomy
SIO_000068: taxonomy

LOC113068197
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068197
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1532..12143
location: region:1532-12143:1
so has part: feature:1532-12143:1:exon
subclass of: SO_0000010

113068197
type: Gene
SIO_000068: ncbigene

position:1532:1
position: 1532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12143:1
position: 12143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532-12143:1:exon

LOC113068197
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068197
product: bcl-2-modifying factor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_026240860.1
SIO_010081: LOC113068197
subclass of: SO_0000673
so part of: LOC113068197
location: join(1532..1638,3777..3952,4227..4402,11305..12143)
location: region:1532-12143:1
so has part: feature:1532-1638:1:exon
so has part: feature:3777-3952:1:exon
so has part: feature:4227-4402:1:exon
so has part: feature:11305-12143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1532-1638:1:exon

position:1638:1
position: 1638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3777-3952:1:exon

position:3777:1
position: 3777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3952:1
position: 3952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4227-4402:1:exon

position:4227:1
position: 4227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4402:1
position: 4402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11305-12143:1:exon

position:11305:1
position: 11305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068197
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068197
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2-modifying factor-like
translation: MDEDEDDVHRKGLRPWPSSQVQLKQTETAGRPPASPSVMLPCPVHVEHTRFFYGSAGLLLLAPPSRSRSPDVVLRPSLRMMERAARAERSVETLIGQKLQLIGDQFYQEHMMHHRNQRIREPLWRRVAMAVHTMVFGR
SIO_010081: LOC113068197
subclass of: SO_0000673
so part of: LOC113068197
location: join(3793..3952,4227..4402,11305..11385)
location: region:3793-11385:1
so has part: feature:3793-3952:1:exon
so has part: feature:4227-4402:1:exon
so has part: feature:11305-11385:1:exon

XP_026096645.1
type: Protein
SIO_000068: ncbiprotein

position:3793:1
position: 3793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11385:1
position: 11385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3793-3952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227-4402:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11305-11385:1:exon

LOC113068198
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70023..110587
location: region:70023-110587:1
so has part: feature:70023-110587:1:exon
subclass of: SO_0000010

113068198
type: Gene
SIO_000068: ncbigene

position:70023:1
position: 70023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110587:1
position: 110587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70023-110587:1:exon

LOC113068198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068198
product: cysteine-rich motor neuron 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_026240861.1
SIO_010081: LOC113068198
subclass of: SO_0000673
so part of: LOC113068198
location: join(70023..70566,78810..78971,80278..80439,92429..92608,93446..93649,95717..95845,96835..96985,101142..101263,103449..103673,104736..104951,105991..106197,107546..107635,108342..108520,109603..110587)
location: region:70023-110587:1
so has part: feature:70023-70566:1:exon
so has part: feature:78810-78971:1:exon
so has part: feature:80278-80439:1:exon
so has part: feature:92429-92608:1:exon
so has part: feature:93446-93649:1:exon
so has part: feature:95717-95845:1:exon
so has part: feature:96835-96985:1:exon
so has part: feature:101142-101263:1:exon
so has part: feature:103449-103673:1:exon
so has part: feature:104736-104951:1:exon
so has part: feature:105991-106197:1:exon
so has part: feature:107546-107635:1:exon
so has part: feature:108342-108520:1:exon
so has part: feature:109603-110587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70023-70566:1:exon

position:70566:1
position: 70566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78810-78971:1:exon

position:78810:1
position: 78810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78971:1
position: 78971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80278-80439:1:exon

position:80278:1
position: 80278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80439:1
position: 80439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92429-92608:1:exon

position:92429:1
position: 92429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92608:1
position: 92608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:93446-93649:1:exon

position:93446:1
position: 93446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93649:1
position: 93649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95717-95845:1:exon

position:95717:1
position: 95717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95845:1
position: 95845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:96835-96985:1:exon

position:96835:1
position: 96835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96985:1
position: 96985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:101142-101263:1:exon

position:101142:1
position: 101142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101263:1
position: 101263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:103449-103673:1:exon

position:103449:1
position: 103449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103673:1
position: 103673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:104736-104951:1:exon

position:104736:1
position: 104736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104951:1
position: 104951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:105991-106197:1:exon

position:105991:1
position: 105991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106197:1
position: 106197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:107546-107635:1:exon

position:107546:1
position: 107546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107635:1
position: 107635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:108342-108520:1:exon

position:108342:1
position: 108342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108520:1
position: 108520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:109603-110587:1:exon

position:109603:1
position: 109603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich motor neuron 1 protein-like
translation: MCHQSLLWLFSVLGFCARALLARECAPCALRSCPVVSALECGSARVLARDPCGCCEQCSRLELELCGGPDWTLGSCGSGLTCAALSGTGPARAPEAGVCRVVPDAMDASDEDESCPLVSGCESVDGQCVCESKHSCIETYSFPNRDACVHAGKTGSHRHDHRHKFVGPVNPACVFSGCNLTADGCVCSSQSCDDHFTYANRSQCQRAAVSPRCIHDRKEFTEGEVYRMDPCWLCQCRGGVSFCSKAECAEVDCENFYVPEGECCPVCIDVELLAVESTKASCWVDHRLRAHEEQWKEDDCTFCQCVDGEPHCTAMACKQSCQNPVKIPGECCPFCEEPSYETVSPLLCPPLENCSLSGHDCPFGFQQDPSGCLLCQCVSNETCPDVSTYCSLECPLGYEKDNYGCEVCECVSAPKCRPMTCSKTCPYGYMRNKHGCEMCRCVRCPPFTCDKHCSDGFRKSRKGCSVCQCRESDRRVSSTSVSVTVSSSFCLTASGQRFEDGDGWHDGCRDCFCHAGREMCVLITCPVPSCAHPVLRLDQCCPGCEDEAGSGQPEGLDLVVCRAPGGELFVEGETWRLDECSSCTCRQGRVLCDSEVCPPVLCHEPIRSKDGCCYVCPEVKPEPLRPEFCVSSSGEVLQAGDSWKPNACSSCVCRNGSVQCFSQQCPAADCRVPVLRKGQCCPQCMLEITSTSGPVILSTAVTESRITAAPPVLSITDGEGLSRDVPSQTEMTLIYQSAAWILAGILLAVVIFLLTAVLVNRRKNWVQMSCYGAPKKTVILQKHVNKSSLVYMEPSRENQFQSVKSETSAEQISIPRAKLSSGRVQR
SIO_010081: LOC113068198
subclass of: SO_0000673
so part of: LOC113068198
location: join(70266..70566,78810..78971,80278..80439,92429..92608,93446..93649,95717..95845,96835..96985,101142..101263,103449..103673,104736..104951,105991..106197,107546..107635,108342..108520,109603..109755)
location: region:70266-109755:1
so has part: feature:70266-70566:1:exon
so has part: feature:78810-78971:1:exon
so has part: feature:80278-80439:1:exon
so has part: feature:92429-92608:1:exon
so has part: feature:93446-93649:1:exon
so has part: feature:95717-95845:1:exon
so has part: feature:96835-96985:1:exon
so has part: feature:101142-101263:1:exon
so has part: feature:103449-103673:1:exon
so has part: feature:104736-104951:1:exon
so has part: feature:105991-106197:1:exon
so has part: feature:107546-107635:1:exon
so has part: feature:108342-108520:1:exon
so has part: feature:109603-109755:1:exon

XP_026096646.1
type: Protein
SIO_000068: ncbiprotein

position:70266:1
position: 70266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109755:1
position: 109755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70266-70566:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78810-78971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80278-80439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92429-92608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93446-93649:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95717-95845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96835-96985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101142-101263:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103449-103673:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104736-104951:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105991-106197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107546-107635:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:108342-108520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109603-109755:1:exon

LOC113068199
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 122734..127150
location: region:122734-127150:1
so has part: feature:122734-127150:1:exon
subclass of: SO_0000010

113068199
type: Gene
SIO_000068: ncbigene

position:122734:1
position: 122734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127150:1
position: 127150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122734-127150:1:exon

LOC113068199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068199
product: actin, alpha skeletal muscle
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 833 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_026240862.1
SIO_010081: LOC113068199
subclass of: SO_0000673
so part of: LOC113068199
location: join(122734..122881,124128..124275,124355..124483,124559..124669,124748..124832,125753..125914,125996..126187,126260..126441,126914..127150)
location: region:122734-127150:1
so has part: feature:122734-122881:1:exon
so has part: feature:124128-124275:1:exon
so has part: feature:124355-124483:1:exon
so has part: feature:124559-124669:1:exon
so has part: feature:124748-124832:1:exon
so has part: feature:125753-125914:1:exon
so has part: feature:125996-126187:1:exon
so has part: feature:126260-126441:1:exon
so has part: feature:126914-127150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122734-122881:1:exon

position:122881:1
position: 122881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124128-124275:1:exon

position:124128:1
position: 124128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124275:1
position: 124275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124355-124483:1:exon

position:124355:1
position: 124355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124483:1
position: 124483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124559-124669:1:exon

position:124559:1
position: 124559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124669:1
position: 124669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:124748-124832:1:exon

position:124748:1
position: 124748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124832:1
position: 124832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:125753-125914:1:exon

position:125753:1
position: 125753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125914:1
position: 125914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:125996-126187:1:exon

position:125996:1
position: 125996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126187:1
position: 126187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:126260-126441:1:exon

position:126260:1
position: 126260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126441:1
position: 126441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:126914-127150:1:exon

position:126914:1
position: 126914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, alpha skeletal muscle
translation: MCDDEEVTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
SIO_010081: LOC113068199
subclass of: SO_0000673
so part of: LOC113068199
location: join(124147..124275,124355..124483,124559..124669,124748..124832,125753..125914,125996..126187,126260..126441,126914..127057)
location: region:124147-127057:1
so has part: feature:124147-124275:1:exon
so has part: feature:124355-124483:1:exon
so has part: feature:124559-124669:1:exon
so has part: feature:124748-124832:1:exon
so has part: feature:125753-125914:1:exon
so has part: feature:125996-126187:1:exon
so has part: feature:126260-126441:1:exon
so has part: feature:126914-127057:1:exon

XP_026096647.1
type: Protein
SIO_000068: ncbiprotein

position:124147:1
position: 124147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127057:1
position: 127057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124147-124275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124355-124483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124559-124669:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124748-124832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125753-125914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125996-126187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126260-126441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126914-127057:1:exon

LOC113068200
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 127937..137365
location: region:127937-137365:1
so has part: feature:127937-137365:1:exon
subclass of: SO_0000010

113068200
type: Gene
SIO_000068: ncbigene

position:127937:1
position: 127937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137365:1
position: 137365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127937-137365:1:exon

LOC113068200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068200
product: rho GTPase-activating protein 11A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_026240863.1
SIO_010081: LOC113068200
subclass of: SO_0000673
so part of: LOC113068200
location: join(127937..128414,129095..129165,130115..130211,130295..130551,130679..130842,131021..131161,131265..131339,131700..131873,131961..132081,132847..132955,133772..133904,134718..137365)
location: region:127937-137365:1
so has part: feature:127937-128414:1:exon
so has part: feature:129095-129165:1:exon
so has part: feature:130115-130211:1:exon
so has part: feature:130295-130551:1:exon
so has part: feature:130679-130842:1:exon
so has part: feature:131021-131161:1:exon
so has part: feature:131265-131339:1:exon
so has part: feature:131700-131873:1:exon
so has part: feature:131961-132081:1:exon
so has part: feature:132847-132955:1:exon
so has part: feature:133772-133904:1:exon
so has part: feature:134718-137365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127937-128414:1:exon

position:128414:1
position: 128414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129095-129165:1:exon

position:129095:1
position: 129095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129165:1
position: 129165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130115-130211:1:exon

position:130115:1
position: 130115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130211:1
position: 130211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130295-130551:1:exon

position:130295:1
position: 130295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130551:1
position: 130551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130679-130842:1:exon

position:130679:1
position: 130679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130842:1
position: 130842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:131021-131161:1:exon

position:131021:1
position: 131021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131161:1
position: 131161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131265-131339:1:exon

position:131265:1
position: 131265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131339:1
position: 131339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:131700-131873:1:exon

position:131700:1
position: 131700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131873:1
position: 131873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:131961-132081:1:exon

position:131961:1
position: 131961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132081:1
position: 132081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:132847-132955:1:exon

position:132847:1
position: 132847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132955:1
position: 132955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:133772-133904:1:exon

position:133772:1
position: 133772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133904:1
position: 133904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:134718-137365:1:exon

position:134718:1
position: 134718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068200
product: rho GTPase-activating protein 11A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_026240864.1
SIO_010081: LOC113068200
subclass of: SO_0000673
so part of: LOC113068200
location: join(127938..128414,129095..129165,130115..130211,130295..130551,130679..130842,131021..131161,131700..131873,131961..132081,132847..132955,133772..133904,134718..137365)
location: region:127938-137365:1
so has part: feature:127938-128414:1:exon
so has part: feature:129095-129165:1:exon
so has part: feature:130115-130211:1:exon
so has part: feature:130295-130551:1:exon
so has part: feature:130679-130842:1:exon
so has part: feature:131021-131161:1:exon
so has part: feature:131700-131873:1:exon
so has part: feature:131961-132081:1:exon
so has part: feature:132847-132955:1:exon
so has part: feature:133772-133904:1:exon
so has part: feature:134718-137365:1:exon

position:127938:1
position: 127938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127938-128414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129095-129165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130115-130211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130295-130551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130679-130842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131021-131161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131700-131873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131961-132081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132847-132955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133772-133904:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134718-137365:1:exon

LOC113068200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 11A-like isoform X1
translation: MKVLERNVVRLAVVQHLRSVYGIKIKNWNKNRNKQTSSNTVKVFGVALEALPHCHVLDYGDVPCFIADVCTSLLEHLDTEGLFRKSGSVVRVKSLRARLEQGEDCLSTALPLDVAGLLKQFFRELPEPVLTPDLHSAFLKAQELPTDEERTSVTVLLSCVLPDRNLNTLRYFFSFLKSVSQRCAENKMDSSNLSVIFAPNLFHCGDGGDKMSSSTEKRLKHQAAAVQRLIDNAQHLGVVPRFLMEKVPVMLGCDAGVFSPSSVSLEDSNAHSDLKKSNRRSLGDMVNGALNRFKTSRTPTHTPQSDGAVFSIATPVIMTPNSKRKLPVESTHTYGFSSKKRRSIKKNLGLELFPNALFGGASTPGSAHSAAGALDSSHSGLLSSVGRNTRASSSSAKRTSRRLRVRRVESGKAGCFSPRVAKKEPVRKSLRLRFSLGKSSRESNVITHSQPGPKRSEVIGFRLATQSSGFHFTKELSPAVLNQSPSKGSRFISVSEDNLLTPQYVSTDHSSSWSRDLSFPRDSFCETPMSLCVKSSSRSEPTIILSKPVLPKSLCCASSDDSVLDSSSEERSHTGPTLLKIKQAFGGSHSDLHSIVTQQNHEEPQDSPCANSEVAETKSVSVSDDNRWLETVNTPLHIDSALFDSGPKWFVDTSSNGSLCLENKSRGFLKETSGDCSQLVDALDIQSPVAFRLETSNRVQSTPYATRSQTNANTSLPSELKESLLTDKTDEDQSEMPQNPTGANEARRMRVAEQIKRFNMMTLNSPQTKSIRSPLKFQRTPVRQSVRRINSLIGGRKDTRMGWCSASQRKTVSLESGLQTSSKPKPPVPPEKPAIKALEDVTNKAPKTKCDTLSANKNAAHERPKSILLQVSKSDTSHYRGSPKNPLTQGRLLPVMKPIDI
SIO_010081: LOC113068200
subclass of: SO_0000673
so part of: LOC113068200
location: join(128295..128414,129095..129165,130115..130211,130295..130551,130679..130842,131021..131161,131265..131339,131700..131873,131961..132081,132847..132955,133772..133904,134718..135961)
location: region:128295-135961:1
so has part: feature:128295-128414:1:exon
so has part: feature:129095-129165:1:exon
so has part: feature:130115-130211:1:exon
so has part: feature:130295-130551:1:exon
so has part: feature:130679-130842:1:exon
so has part: feature:131021-131161:1:exon
so has part: feature:131265-131339:1:exon
so has part: feature:131700-131873:1:exon
so has part: feature:131961-132081:1:exon
so has part: feature:132847-132955:1:exon
so has part: feature:133772-133904:1:exon
so has part: feature:134718-135961:1:exon

XP_026096648.1
type: Protein
SIO_000068: ncbiprotein

position:128295:1
position: 128295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135961:1
position: 135961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128295-128414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129095-129165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130115-130211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130295-130551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130679-130842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131021-131161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131265-131339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131700-131873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131961-132081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132847-132955:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133772-133904:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134718-135961:1:exon

LOC113068200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 11A-like isoform X2
translation: MKVLERNVVRLAVVQHLRSVYGIKIKNWNKNRNKQTSSNTVKVFGVALEALPHCHVLDYGDVPCFIADVCTSLLEHLDTEGLFRKSGSVVRVKSLRARLEQGEDCLSTALPLDVAGLLKQFFRELPEPVLTPDLHSAFLKAQELPTDEERTSVTVLLSCVLPDRNLNTLRYFFSFLKSVSQRCAENKMDSSNLSVIFAPNLFHCGDGGDKMSSSTEKRLKHQAAAVQRLIDNAQHLGVVPRFLMEKVPVMLGCDAGVFSPSSVSLEDSNAHSDLKKSNRRSLGVFSIATPVIMTPNSKRKLPVESTHTYGFSSKKRRSIKKNLGLELFPNALFGGASTPGSAHSAAGALDSSHSGLLSSVGRNTRASSSSAKRTSRRLRVRRVESGKAGCFSPRVAKKEPVRKSLRLRFSLGKSSRESNVITHSQPGPKRSEVIGFRLATQSSGFHFTKELSPAVLNQSPSKGSRFISVSEDNLLTPQYVSTDHSSSWSRDLSFPRDSFCETPMSLCVKSSSRSEPTIILSKPVLPKSLCCASSDDSVLDSSSEERSHTGPTLLKIKQAFGGSHSDLHSIVTQQNHEEPQDSPCANSEVAETKSVSVSDDNRWLETVNTPLHIDSALFDSGPKWFVDTSSNGSLCLENKSRGFLKETSGDCSQLVDALDIQSPVAFRLETSNRVQSTPYATRSQTNANTSLPSELKESLLTDKTDEDQSEMPQNPTGANEARRMRVAEQIKRFNMMTLNSPQTKSIRSPLKFQRTPVRQSVRRINSLIGGRKDTRMGWCSASQRKTVSLESGLQTSSKPKPPVPPEKPAIKALEDVTNKAPKTKCDTLSANKNAAHERPKSILLQVSKSDTSHYRGSPKNPLTQGRLLPVMKPIDI
SIO_010081: LOC113068200
subclass of: SO_0000673
so part of: LOC113068200
location: join(128295..128414,129095..129165,130115..130211,130295..130551,130679..130842,131021..131161,131700..131873,131961..132081,132847..132955,133772..133904,134718..135961)
location: region:128295-135961:1
so has part: feature:128295-128414:1:exon
so has part: feature:129095-129165:1:exon
so has part: feature:130115-130211:1:exon
so has part: feature:130295-130551:1:exon
so has part: feature:130679-130842:1:exon
so has part: feature:131021-131161:1:exon
so has part: feature:131700-131873:1:exon
so has part: feature:131961-132081:1:exon
so has part: feature:132847-132955:1:exon
so has part: feature:133772-133904:1:exon
so has part: feature:134718-135961:1:exon

XP_026096649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128295-128414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129095-129165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130115-130211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130295-130551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130679-130842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131021-131161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131700-131873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131961-132081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132847-132955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133772-133904:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134718-135961:1:exon

LOC113068201
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 139008..141716
location: region:139008-141716:1
so has part: feature:139008-141716:1:exon
subclass of: SO_0000010

113068201
type: Gene
SIO_000068: ncbigene

position:139008:1
position: 139008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141716:1
position: 141716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139008-141716:1:exon

LOC113068201
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068201
product: gremlin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_026240865.1
SIO_010081: LOC113068201
subclass of: SO_0000673
so part of: LOC113068201
location: join(139008..139201,140330..141716)
location: region:139008-141716:1
so has part: feature:139008-139201:1:exon
so has part: feature:140330-141716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139008-139201:1:exon

position:139201:1
position: 139201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140330-141716:1:exon

position:140330:1
position: 140330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068201
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gremlin-1-like
translation: MGRIAAPLLTQISSRSSSTLTVPMASSARIALATLFIWVLLLSSPAESKRNRGAIPHPDKNNPNESDQQQQQQQQHQAAPGPGPGPRGRSRGSEEVLESSQEALHVTERRYLKRDWCKTQPLKQTIHEEGCVSRTIINRFCYGQCNSFYIPRHVRREEGAFQSCSFCKPKRFTTMTFTLNCPDQQPPTRKKRVQRVKQCRCISIELD
SIO_010081: LOC113068201
subclass of: SO_0000673
so part of: LOC113068201
location: join(139138..139201,140330..140889)
location: region:139138-140889:1
so has part: feature:139138-139201:1:exon
so has part: feature:140330-140889:1:exon

XP_026096650.1
type: Protein
SIO_000068: ncbiprotein

position:139138:1
position: 139138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140889:1
position: 140889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139138-139201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140330-140889:1:exon

LOC113068203
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141857..>165750)
location: region:141857-165750:-1
so has part: feature:141857-165750:-1:exon
subclass of: SO_0000010

113068203
type: Gene
SIO_000068: ncbigene

position:141857:-1
position: 141857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165750:-1
position: 165750
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141857-165750:-1:exon

LOC113068203
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068203
product: formin-like
inference: similar to RNA sequence (same species):INSD:GBZM01010281.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 228 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_026240866.1
SIO_010081: LOC113068203
subclass of: SO_0000673
so part of: LOC113068203
location: complement(join(141857..143738,144244..144325,145035..145184,150756..150807,153775..153867,160313..160433,161473..161532,161644..161790,163459..163588,164768..164856,165080..165141,165663..>165750))
location: region:141857-165750:-1
so has part: feature:165663-165750:-1:exon
so has part: feature:165080-165141:-1:exon
so has part: feature:164768-164856:-1:exon
so has part: feature:163459-163588:-1:exon
so has part: feature:161644-161790:-1:exon
so has part: feature:161473-161532:-1:exon
so has part: feature:160313-160433:-1:exon
so has part: feature:153775-153867:-1:exon
so has part: feature:150756-150807:-1:exon
so has part: feature:145035-145184:-1:exon
so has part: feature:144244-144325:-1:exon
so has part: feature:141857-143738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165663-165750:-1:exon

position:165663:-1
position: 165663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165080-165141:-1:exon

position:165080:-1
position: 165080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165141:-1
position: 165141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164768-164856:-1:exon

position:164768:-1
position: 164768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164856:-1
position: 164856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:163459-163588:-1:exon

position:163459:-1
position: 163459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163588:-1
position: 163588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:161644-161790:-1:exon

position:161644:-1
position: 161644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161790:-1
position: 161790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161473-161532:-1:exon

position:161473:-1
position: 161473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161532:-1
position: 161532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:160313-160433:-1:exon

position:160313:-1
position: 160313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160433:-1
position: 160433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153775-153867:-1:exon

position:153775:-1
position: 153775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153867:-1
position: 153867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:150756-150807:-1:exon

position:150756:-1
position: 150756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150807:-1
position: 150807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:145035-145184:-1:exon

position:145035:-1
position: 145035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145184:-1
position: 145184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:144244-144325:-1:exon

position:144244:-1
position: 144244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144325:-1
position: 144325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:141857-143738:-1:exon

position:143738:-1
position: 143738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113068203
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068203
inference: similar to RNA sequence (same species):INSD:GBZM01010281.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 186 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like
translation: MKPLYWNRIQIQDQNNNTLWSSLEEPDIINTQEFEDLFSKATVQPKKKPLSDQYEKKNKTRKLIKLLDGKRSQAVGILISSLHLEMKDIQQAVLTVDHSVVDLETIEALYENRAQPDELEKIRKHYETSKEDEVKLLDKPEQFLYELSQIPDFARRVHCIIFQSVFVDSISSVHRKLEIISAVSKAFLDNDSVKDVIGLILAFGNYMNGGNRTRGQADGFGLEILPKLKDVKSRDNRMSLVDYVVSYYLRNMDKNAGTEKSVFPLPEPQDLFHAAQVKFEDLAKDLRKLKKELTACVKEVEQVCENSSEEHLQPFKDKMESFVSTAQSQYETEDERLQAAQKSFQDMVMYFGLKPKSGEKEVSPNHIFMLWYEFCNDFKSIWNRENKNISKERLKEAQQTVQKITAEKKVETKKTNANSLKERLRKKEAGVSSS
SIO_010081: LOC113068203
subclass of: SO_0000673
so part of: LOC113068203
location: complement(join(143694..143738,144244..144325,145035..145184,150756..150807,153775..153867,160313..160433,161473..161532,161644..161790,163459..163588,164768..164856,165080..165141,165663..>165750))
location: region:143694-165750:-1
so has part: feature:165663-165750:-1:exon
so has part: feature:165080-165141:-1:exon
so has part: feature:164768-164856:-1:exon
so has part: feature:163459-163588:-1:exon
so has part: feature:161644-161790:-1:exon
so has part: feature:161473-161532:-1:exon
so has part: feature:160313-160433:-1:exon
so has part: feature:153775-153867:-1:exon
so has part: feature:150756-150807:-1:exon
so has part: feature:145035-145184:-1:exon
so has part: feature:144244-144325:-1:exon
so has part: feature:143694-143738:-1:exon

XP_026096651.1
type: Protein
SIO_000068: ncbiprotein

position:143694:-1
position: 143694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165663-165750:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:165080-165141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164768-164856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163459-163588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161644-161790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161473-161532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160313-160433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153775-153867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:150756-150807:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145035-145184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144244-144325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143694-143738:-1:exon

LOC113068204
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182128..213621
location: region:182128-213621:1
so has part: feature:182128-213621:1:exon
subclass of: SO_0000010

113068204
type: Gene
SIO_000068: ncbigene

position:182128:1
position: 182128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213621:1
position: 213621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182128-213621:1:exon

LOC113068204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068204
product: cysteine-rich motor neuron 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_026240867.1
SIO_010081: LOC113068204
subclass of: SO_0000673
so part of: LOC113068204
location: join(182128..182571,183888..184049,196130..196309,196622..196825,198879..199007,199977..200127,204149..204270,206595..206819,207791..208006,208889..209095,210397..210486,211325..211503,212637..213621)
location: region:182128-213621:1
so has part: feature:182128-182571:1:exon
so has part: feature:183888-184049:1:exon
so has part: feature:196130-196309:1:exon
so has part: feature:196622-196825:1:exon
so has part: feature:198879-199007:1:exon
so has part: feature:199977-200127:1:exon
so has part: feature:204149-204270:1:exon
so has part: feature:206595-206819:1:exon
so has part: feature:207791-208006:1:exon
so has part: feature:208889-209095:1:exon
so has part: feature:210397-210486:1:exon
so has part: feature:211325-211503:1:exon
so has part: feature:212637-213621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182128-182571:1:exon

position:182571:1
position: 182571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183888-184049:1:exon

position:183888:1
position: 183888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184049:1
position: 184049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196130-196309:1:exon

position:196130:1
position: 196130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196309:1
position: 196309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196622-196825:1:exon

position:196622:1
position: 196622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196825:1
position: 196825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:198879-199007:1:exon

position:198879:1
position: 198879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199007:1
position: 199007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199977-200127:1:exon

position:199977:1
position: 199977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200127:1
position: 200127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:204149-204270:1:exon

position:204149:1
position: 204149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204270:1
position: 204270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:206595-206819:1:exon

position:206595:1
position: 206595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206819:1
position: 206819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:207791-208006:1:exon

position:207791:1
position: 207791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208006:1
position: 208006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:208889-209095:1:exon

position:208889:1
position: 208889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209095:1
position: 209095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:210397-210486:1:exon

position:210397:1
position: 210397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210486:1
position: 210486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:211325-211503:1:exon

position:211325:1
position: 211325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211503:1
position: 211503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:212637-213621:1:exon

position:212637:1
position: 212637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich motor neuron 1 protein-like
translation: MSLCYHGNAVFFSAVVPDAMDASDEDESCPLVSGCESVDGQCVCESKHSCIETYSFPNRDACVHAGKTGSHRHDHRHKFVGPVNPACVFSGCNLTADGCVCSSQSCNDHFMYANRSQCQRAAVSPRCVHDRKEFTEGEVYRMDPCWLCQCRGGVSFCSKAECAEVDCENFYVPEGECCPVCIDVELLAVESTKASCWVDHRLRAHEEQWKEDDCTFCQCVDGEPHCTAMACKQSCQNPVKIPGECCPFCEEPSYETVSPLLCPPLENCSLSGHDCPFGFQQDPSGCLLCQCVSNETCPDVSTYCSLECPLGYEKDNYGCEVCECVSAPKCRPMTCSKTCPYGYMRNKHGCEMCRCVRCPPFTCDKHCSDGFRKSRKGCSVCQCRESDRRVSSTSVSVTVSSSFCLTASGQRFEDGDGWHDGCRDCFCHAGREMCVLITCPVPSCAHPVLRLDQCCPGCEDEAGSGQPEGLDLVVCRAPGGELFVEGETWRLDECSSCTCRQGRVLCESEVCPPVLCHEPIRSKDGCCYVCPEDKPEPLRPEFCVSSSGEVLQAGDSWKPNACSSCVCRNGSVQCFSQQCPAADCRVPVLRKGQCCPQCMLEITSTSGPVILSTAVTESRITAAPPVLSITDGEGLSRDVPSQTEMTLIYQSAAWILAGILLAVVIFLLTAVLVNRRKNWVQMSCYGAPKKTVILQKHVNKSSLVYMEPSRENQFQSVKSETSAEQISIPRAKLSSGRVQR
SIO_010081: LOC113068204
subclass of: SO_0000673
so part of: LOC113068204
location: join(182367..182571,183888..184049,196130..196309,196622..196825,198879..199007,199977..200127,204149..204270,206595..206819,207791..208006,208889..209095,210397..210486,211325..211503,212637..212789)
location: region:182367-212789:1
so has part: feature:182367-182571:1:exon
so has part: feature:183888-184049:1:exon
so has part: feature:196130-196309:1:exon
so has part: feature:196622-196825:1:exon
so has part: feature:198879-199007:1:exon
so has part: feature:199977-200127:1:exon
so has part: feature:204149-204270:1:exon
so has part: feature:206595-206819:1:exon
so has part: feature:207791-208006:1:exon
so has part: feature:208889-209095:1:exon
so has part: feature:210397-210486:1:exon
so has part: feature:211325-211503:1:exon
so has part: feature:212637-212789:1:exon

XP_026096652.1
type: Protein
SIO_000068: ncbiprotein

position:182367:1
position: 182367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212789:1
position: 212789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182367-182571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183888-184049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196130-196309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196622-196825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198879-199007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199977-200127:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204149-204270:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206595-206819:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207791-208006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208889-209095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210397-210486:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:211325-211503:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212637-212789:1:exon

LOC113068205
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 226022..230460
location: region:226022-230460:1
so has part: feature:226022-230460:1:exon
subclass of: SO_0000010

113068205
type: Gene
SIO_000068: ncbigene

position:226022:1
position: 226022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230460:1
position: 230460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226022-230460:1:exon

LOC113068205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068205
product: actin, alpha skeletal muscle
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 830 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_026240868.1
SIO_010081: LOC113068205
subclass of: SO_0000673
so part of: LOC113068205
location: join(226022..226151,227471..227618,227698..227826,227902..228012,228091..228175,229053..229214,229296..229487,229560..229741,230224..230460)
location: region:226022-230460:1
so has part: feature:226022-226151:1:exon
so has part: feature:227471-227618:1:exon
so has part: feature:227698-227826:1:exon
so has part: feature:227902-228012:1:exon
so has part: feature:228091-228175:1:exon
so has part: feature:229053-229214:1:exon
so has part: feature:229296-229487:1:exon
so has part: feature:229560-229741:1:exon
so has part: feature:230224-230460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226022-226151:1:exon

position:226151:1
position: 226151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227471-227618:1:exon

position:227471:1
position: 227471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227618:1
position: 227618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227698-227826:1:exon

position:227698:1
position: 227698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227826:1
position: 227826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227902-228012:1:exon

position:227902:1
position: 227902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228012:1
position: 228012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228091-228175:1:exon

position:228091:1
position: 228091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228175:1
position: 228175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:229053-229214:1:exon

position:229053:1
position: 229053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229214:1
position: 229214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229296-229487:1:exon

position:229296:1
position: 229296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229487:1
position: 229487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:229560-229741:1:exon

position:229560:1
position: 229560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229741:1
position: 229741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:230224-230460:1:exon

position:230224:1
position: 230224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, alpha skeletal muscle
translation: MCDDEEVTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
SIO_010081: LOC113068205
subclass of: SO_0000673
so part of: LOC113068205
location: join(227490..227618,227698..227826,227902..228012,228091..228175,229053..229214,229296..229487,229560..229741,230224..230367)
location: region:227490-230367:1
so has part: feature:227490-227618:1:exon
so has part: feature:227698-227826:1:exon
so has part: feature:227902-228012:1:exon
so has part: feature:228091-228175:1:exon
so has part: feature:229053-229214:1:exon
so has part: feature:229296-229487:1:exon
so has part: feature:229560-229741:1:exon
so has part: feature:230224-230367:1:exon

XP_026096653.1
type: Protein
SIO_000068: ncbiprotein

position:227490:1
position: 227490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230367:1
position: 230367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227490-227618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227698-227826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227902-228012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228091-228175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229053-229214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229296-229487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229560-229741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:230224-230367:1:exon

LOC113068206
type: Gene
subclass of: SO_0000704
RO_0002162: 7957
gene: LOC113068206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 231260..239596
location: region:231260-239596:1
so has part: feature:231260-239596:1:exon
subclass of: SO_0000010

113068206
type: Gene
SIO_000068: ncbigene

position:231260:1
position: 231260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239596:1
position: 239596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231260-239596:1:exon

LOC113068206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7957
gene: LOC113068206
product: rho GTPase-activating protein 11A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_026240870.1
SIO_010081: LOC113068206
subclass of: SO_0000673
so part of: LOC113068206
location: join(231260..231718,232396..232466,233438..233534,233618..233874,234002..234165,234613..234753,234857..234931,235298..235471,235561..235681,236436..236544,237361..237493,238324..239596)
location: region:231260-239596:1
so has part: feature:231260-231718:1:exon
so has part: feature:232396-232466:1:exon
so has part: feature:233438-233534:1:exon
so has part: feature:233618-233874:1:exon
so has part: feature:234002-234165:1:exon
so has part: feature:234613-234753:1:exon
so has part: feature:234857-234931:1:exon
so has part: feature:235298-235471:1:exon
so has part: feature:235561-235681:1:exon
so has part: feature:236436-236544:1:exon
so has part: feature:237361-237493:1:exon
so has part: feature:238324-239596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231260-231718:1:exon

position:231718:1
position: 231718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232396-232466:1:exon

position:232396:1
position: 232396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232466:1
position: 232466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233438-233534:1:exon

position:233438:1
position: 233438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233534:1
position: 233534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233618-233874:1:exon

position:233618:1
position: 233618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233874:1
position: 233874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234002-234165:1:exon

position:234002:1
position: 234002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234165:1
position: 234165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:234613-234753:1:exon

position:234613:1
position: 234613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234753:1
position: 234753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:234857-234931:1:exon

position:234857:1
position: 234857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234931:1
position: 234931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:235298-235471:1:exon

position:235298:1
position: 235298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235471:1
position: 235471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:235561-235681:1:exon

position:235561:1
position: 235561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235681:1
position: 235681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:236436-236544:1:exon

position:236436:1
position: 236436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236544:1
position: 236544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:237361-237493:1:exon

position:237361:1
position: 237361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237493:1
position: 237493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:238324-239596:1:exon

position:238324:1
position: 238324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113068206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7957
gene: LOC113068206
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 11A-like
translation: MKVLERNVVRLAVVQHLRSVYGIKIKNWNKNRNKQTSSNTVKVFGVALEALPHCHVLDYGDVPCFIADVCTSLLEHLDTEGLFRKSGSVLRVKSLRARLEQGEDCLSTALPLDVAGLLKQFFRELPEPVLTPDLHSAFLKAQELPTDEERTSATVLLSCVLPDRNLNTLRYFFSFLKSVSQRCAENKMDSSNLSVIFAPNLFHCGDGGDKMSSSTEKRLKHQAAAVQRLIDNAQHLGVVPRFLMEKVPVMLGCDAGVFSPSSVSLEDSNAHSDLKKSNRRSLGDMVNGALNRFKTSRTPTHTPQSDGAVFSKATPVIMTPNSKRKLPVESTHTYGFSSKKRRSIKKNLGLELFPNALFGGASTPGSAHSAAGALDSSHSGLLSSVGRNTRASSSSAKRTSRRLRVRRVESGKAGCFSPRVAKKEPVRKSLRLRFSLGKSSRESNVITHSQPGPKRSEVIGFRLATQSSGFHFTKELSPAVLNKSPSKGSRFISVSEDNLLTPQCVSTDHSSSWSRDLSFPRDSFCETPMSLCVKSSSRSEPTVILSKPVLPKSLCCDDSVLDSSSEERSHTGPTLLKIKQAFGGSHSDLHSIVTQQNHEEPQDSTCANSEAAETKSVSDSDDNRWLETVNTPLHIDSTLFDSGPKWFVDTSSNGSLCLENKSRGFLKETSGDCSQLVDALDIQSPVAFRLETSNRVQSTPYATRSQTNANTSLLSELKESLLTDKTDEDQEMPQNPTGANEARRMRVADQIKRFNMMTLNSPQTKSIRSPLKFQRTPVRQSVRRINSLIGGRKDTRMGWCSASQRKTVSLESGLQTSSKPKPPVPPEKPAIKALEDVTNKAPKTKCDTLSANKNAANEHPKSILLQVSKSDTSHYRGSPKNPLTQGRLLPVMKPIDI
SIO_010081: LOC113068206
subclass of: SO_0000673
so part of: LOC113068206
location: join(231599..231718,232396..232466,233438..233534,233618..233874,234002..234165,234613..234753,234857..234931,235298..235471,235561..235681,236436..236544,237361..237493,238324..239557)
location: region:231599-239557:1
so has part: feature:231599-231718:1:exon
so has part: feature:232396-232466:1:exon
so has part: feature:233438-233534:1:exon
so has part: feature:233618-233874:1:exon
so has part: feature:234002-234165:1:exon
so has part: feature:234613-234753:1:exon
so has part: feature:234857-234931:1:exon
so has part: feature:235298-235471:1:exon
so has part: feature:235561-235681:1:exon
so has part: feature:236436-236544:1:exon
so has part: feature:237361-237493:1:exon
so has part: feature:238324-239557:1:exon

XP_026096655.1
type: Protein
SIO_000068: ncbiprotein

position:231599:1
position: 231599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239557:1
position: 239557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231599-231718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232396-232466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233438-233534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233618-233874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234002-234165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234613-234753:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234857-234931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235298-235471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235561-235681:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236436-236544:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237361-237493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238324-239557:1:exon